BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019905
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 34/313 (10%)
Query: 26 DVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR 85
DV A E+ E+ L + F+L +L+ A+ F+ +NI+ G VYKG+L +
Sbjct: 11 DVPAEEDPEVH----LGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGT 63
Query: 86 RIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVKR QF E + + L L G C ERLLV YM N ++A
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 145 KHLFHW--ETHPMKWAMRLRVVLHLAQALEY----CTSKGRALYHDLNAYRILFDEDGNP 198
L P+ W R R+ L A+ L Y C K ++ D+ A IL DE+
Sbjct: 124 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEA 181
Query: 199 RLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 253
+ FGL K + + + PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 182 VVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 254 IPPSHAL-------------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
L L++++ L+ L D L+G + D++ +L+++A C Q P
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 301
Query: 301 RERPNPKSLVTAL 313
ERP +V L
Sbjct: 302 MERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 34/313 (10%)
Query: 26 DVDAAENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR 85
DV A E+ E+ L + F+L +L+ A+ F +NI+ G VYKG+L +
Sbjct: 3 DVPAEEDPEVH----LGQLKRFSLRELQVASDNFXNKNIL---GRGGFGKVYKGRLADGX 55
Query: 86 RIAVKRFNR-MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVKR QF E + + L L G C ERLLV YM N ++A
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 145 KHLFHWETH--PMKWAMRLRVVLHLAQALEY----CTSKGRALYHDLNAYRILFDEDGNP 198
L P+ W R R+ L A+ L Y C K ++ D+ A IL DE+
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEA 173
Query: 199 RLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 253
+ FGL K + + + PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 174 VVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 254 IPPSHAL-------------DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
L L++++ L+ L D L+G + D++ +L+++A C Q P
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 293
Query: 301 RERPNPKSLVTAL 313
ERP +V L
Sbjct: 294 MERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 44 FREFTLEQLKNATSGFAVENIV---SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD- 99
F F+ +LKN T+ F I ++ GE VVYKG + N +AVK+ M
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 100 ---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-THPM 155
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T P+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211
W MR ++ A + + + ++ D+ + IL DE ++S FGL + S
Sbjct: 131 SWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
A+ PE LR G +TP+S IYSFG +LL++++G +P A+D R+ L
Sbjct: 190 VMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 243
Query: 270 MLTDSC-----------LEGQFTDDDGTE---LVRLASRCLQYEPRERPNPKSL 309
+ ++ + D D T + +AS+CL + +RP+ K +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 44 FREFTLEQLKNATSGFAVENIV---SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD- 99
F F+ +LKN T+ F I ++ GE VVYKG + N +AVK+ M
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 100 ---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-THPM 155
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T P+
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211
W MR ++ A + + + ++ D+ + IL DE ++S FGL + S
Sbjct: 131 SWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
A+ PE LR G +TP+S IYSFG +LL++++G +P A+D R+ L
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 243
Query: 270 MLTDSC-----------LEGQFTDDDGTE---LVRLASRCLQYEPRERPNPKSL 309
+ ++ + D D T + +AS+CL + +RP+ K +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 44 FREFTLEQLKNATSGFAVENIV---SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD- 99
F F+ +LKN T+ F I ++ GE VVYKG + N +AVK+ M
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 64
Query: 100 ---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-THPM 155
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T P+
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211
W MR ++ A + + + ++ D+ + IL DE ++S FGL + S
Sbjct: 125 SWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
A+ PE LR G +TP+S IYSFG +LL++++G +P A+D R+ L
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 237
Query: 270 MLTDSC-----------LEGQFTDDDGTE---LVRLASRCLQYEPRERPNPKSL 309
+ ++ + D D T + +AS+CL + +RP+ K +
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 36/294 (12%)
Query: 44 FREFTLEQLKNATSGFAVENIV---SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD- 99
F F+ +LKN T+ F I ++ GE VVYKG + N +AVK+ M
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 61
Query: 100 ---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-THPM 155
+QF +E + + ++ L LLG +GD+ LV Y PN +L L + T P+
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 211
W R ++ A + + + ++ D+ + IL DE ++S FGL + S
Sbjct: 122 SWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 212 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 269
A+ PE LR G +TP+S IYSFG +LL++++G +P A+D R+ L
Sbjct: 181 VXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG--LP---AVDEHREPQLL 234
Query: 270 MLTDSC-----------LEGQFTDDDGTEL---VRLASRCLQYEPRERPNPKSL 309
+ ++ + D D T + +AS+CL + +RP+ K +
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 32 NDEMSEVDGLP--SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAV 89
ND +S +P S+R L L+ AT+ F + ++ G VYKG L + ++A+
Sbjct: 13 NDALSSSYLVPFESYR-VPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVAL 68
Query: 90 KRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 149
KR + +F E ++ R+ L +L+G C E +E +L+ +YM N L +HL+
Sbjct: 69 KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
Query: 150 WE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLM 206
+ T M W RL + + A+ L Y + RA+ H D+ + IL DE+ P+++ FG+
Sbjct: 129 SDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGIS 186
Query: 207 KNSRD-GKSY-----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----P 256
K + G+++ L + PEY GR+T +S +YSFG +L ++L + P
Sbjct: 187 KKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 257 SHALDLIR-------DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
++L + L+ + D L + + + A +CL +RP+
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 28/296 (9%)
Query: 32 NDEMSEVDGLP--SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAV 89
ND +S +P S+R L L+ AT+ F + ++ G VYKG L + ++A+
Sbjct: 13 NDALSSSYLVPFESYR-VPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVAL 68
Query: 90 KRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 149
KR + +F E ++ R+ L +L+G C E +E +L+ +YM N L +HL+
Sbjct: 69 KRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
Query: 150 WE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLM 206
+ T M W RL + + A+ L Y + RA+ H D+ + IL DE+ P+++ FG+
Sbjct: 129 SDLPTMSMSWEQRLEICIGAARGLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGIS 186
Query: 207 KNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----P 256
K + L + PEY GR+T +S +YSFG +L ++L + P
Sbjct: 187 KKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 257 SHALDLIR-------DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
++L + L+ + D L + + + A +CL +RP+
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS 302
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESV 237
DL A L ++ G ++S FGL + D + S+ + ++PPE L + + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 238 IYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 189 IWAFGVLMWEIYSLGKMP 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 123
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVTPES 236
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + + +S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 237 VIYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 183 DIWAFGVLMWEIYSLGKMP 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESV 237
DL A L ++ G ++S FGL + D + S+ + ++PPE L + + +S
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 238 IYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 204 IWAFGVLMWEIYSLGKMP 221
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 69
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 127
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVTPES 236
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + + +S
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 237 VIYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 187 DIWAFGVLMWEIYSLGKMP 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 76
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 134
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVTPES 236
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + + +S
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 237 VIYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 194 DIWAFGVLMWEIYSLGKMP 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVTPES 236
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + + +S
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 237 VIYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 203 DIWAFGVLMWEIYSLGKMP 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 10/199 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+ E G VV GK Q +A+K + + +F+EEA+ + L + +L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + ++ EYM N L +L H + L + + +A+EY SK + L+
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVTPES 236
DL A L ++ G ++S FGL + D + Y++++ ++PPE L + + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 237 VIYSFGTLLLDLLSGKHIP 255
I++FG L+ ++ S +P
Sbjct: 188 DIWAFGVLMWEIYSLGKMP 206
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 26/267 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL--GCCC 126
G + VYKGK +AVK N A P P+Q VG LR R N+L
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHD 184
+ +V ++ +L HL ET K+ M+ + + A+ ++Y +K ++ D
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHRD 145
Query: 185 LNAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---E 235
L + I ED ++ FGL + SR S+ S ++ + PE +R P +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLA 292
S +Y+FG +L +L++G+ +P S+ + RD+ ++M+ L + + RL
Sbjct: 206 SDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLM 262
Query: 293 SRCLQYEPRERPNPKSLVTALSPLQKE 319
+ CL+ + ERP+ ++ + L +E
Sbjct: 263 AECLKKKRDERPSFPRILAEIEELARE 289
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 28/268 (10%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 33 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH 183
+ + +V ++ +L HL ET K+ M+ + + A+ ++Y +K ++
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHR 144
Query: 184 DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP--- 234
DL + I ED ++ FGL + SR S+ S ++ + PE +R P
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 235 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRL 291
+S +Y+FG +L +L++G+ +P S+ + RD+ ++M+ L + + RL
Sbjct: 205 QSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261
Query: 292 ASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ CL+ + ERP+ ++ + L +E
Sbjct: 262 MAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 21 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH 183
+ + +V ++ +L HL ET K+ M+ + + A+ ++Y +K ++
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYLHAKS-IIHR 132
Query: 184 DLNAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP--- 234
DL + I ED ++ FGL S + S ++ + PE +R P
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 235 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRL 291
+S +Y+FG +L +L++G+ +P S+ + RD+ ++M+ L + + RL
Sbjct: 193 QSDVYAFGIVLYELMTGQ-LPYSNINN--RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 249
Query: 292 ASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ CL+ + ERP+ ++ + L +E
Sbjct: 250 MAECLKKKRDERPSFPRILAEIEELARE 277
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 86 RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLA 144
++AVK A + FL EA + QLR++ L LLG E L +V EYM +L
Sbjct: 218 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTF 203
+L + L+ L + +A+EY +G H DL A +L ED ++S F
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDF 333
Query: 204 GLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
GL K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 334 GLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 86 RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLA 144
++AVK A + FL EA + QLR++ L LLG E L +V EYM +L
Sbjct: 46 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTF 203
+L + L+ L + +A+EY +G H DL A +L ED ++S F
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDF 161
Query: 204 GLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
GL K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 162 GLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 86 RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLA 144
++AVK A + FL EA + QLR++ L LLG E L +V EYM +L
Sbjct: 31 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTF 203
+L + L+ L + +A+EY +G H DL A +L ED ++S F
Sbjct: 89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDF 146
Query: 204 GLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
GL K + + + +T PE LR + + +S ++SFG LL ++ S +P
Sbjct: 147 GLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 16/252 (6%)
Query: 76 VYKGKLE-NQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
V+ G+L + +AVK PD + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V E + L E ++ L++V A +EY SK ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
E ++S FG+ + DG ++ + +T PE L GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 248 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306
S G P+ + R+ + C E D + RL +C YEP +RP+
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKGGRLPCPE--LCPD---AVFRLMEQCWAYEPGQRPSF 362
Query: 307 KSLVTALSPLQK 318
++ L ++K
Sbjct: 363 STIYQELQSIRK 374
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 86 RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLA 144
++AVK A + FL EA + QLR++ L LLG E L +V EYM +L
Sbjct: 37 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTF 203
+L + L+ L + +A+EY +G H DL A +L ED ++S F
Sbjct: 95 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDF 152
Query: 204 GLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
GL K + + + +T PE LR + +S ++SFG LL ++ S +P
Sbjct: 153 GLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 16/252 (6%)
Query: 76 VYKGKLE-NQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 133
V+ G+L + +AVK PD + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V E + L E ++ L++V A +EY SK ++ DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVT 247
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 247
E ++S FG+ + DG ++ + +T PE L GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 248 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306
S G P+ + R+ + C E D + RL +C YEP +RP+
Sbjct: 308 TFSLGASPYPNLSNQQTREFVEKGGRLPCPE--LCPD---AVFRLMEQCWAYEPGQRPSF 362
Query: 307 KSLVTALSPLQK 318
++ L ++K
Sbjct: 363 STIYQELQSIRK 374
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 30/278 (10%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+V G V+ G ++AVK + + P FL EA + QL++ RL L
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
+ + ++ EYM N +L L + L + +A+ + + + ++
Sbjct: 75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IH 132
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPE 235
DL A IL + + +++ FGL + +R+G + + +T PE + G T +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFTIK 190
Query: 236 SVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTEL 288
S ++SFG LL ++++ IP P +L +R +M+ D+C E EL
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------EL 239
Query: 289 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEFSISP 326
+L C + P +RP L + L TE P
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 265 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 293
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 38 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 95
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 96 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 154
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 155 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 212
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 213 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 261
Query: 302 ERPNPKSLVTALSPLQKETEFSISP 326
+RP L + L TE P
Sbjct: 262 DRPTFDYLRSVLEDFFTATEGQFQP 286
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 37 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 94
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 95 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 153
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 154 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 211
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 212 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 260
Query: 302 ERPNPKSLVTALSPLQKETEFSISP 326
+RP L + L TE P
Sbjct: 261 DRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 145
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 204 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 302 ERPNPKSLVTALSPLQKETEFSISP 326
+RP L + L TE P
Sbjct: 253 DRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 264
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 265 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 293
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 92
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 151
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 152 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 210 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 258
Query: 302 ERPNPKSLVTALSPLQKETEFSISP 326
+RP L + L TE P
Sbjct: 259 DRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 261
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 262 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 264 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 292
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 39 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 96
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 97 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 155
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 156 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 213
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 214 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 262
Query: 302 ERPNPKSLVTALSPLQKETEFSISP 326
+RP L + L TE P
Sbjct: 263 DRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 257
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 258 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 286
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 271 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 299
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 263
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 264 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 292
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 293 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 321
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 250
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
D EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 251 -PDMLLELMRM---CWQYNPKMRP---SFLEIISSIKEEME 284
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 30/260 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 34 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 92 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 151 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 208
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 209 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 257
Query: 302 ERPNPKSLVTALSPLQKETE 321
+RP L + L TE
Sbjct: 258 DRPTFDYLRSVLEDFFTATE 277
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L P + +++ +A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 270
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 271 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 299
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L P + +++ +A +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A + ED ++ FG+ ++ + Y + + PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF 260
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 261 ------ELMRM---CWQYNPKMRP---SFLEIISSIKEEME 289
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 22/250 (8%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL--GCCC 126
G + VYKGK +AVK N A P P+Q VG LR R N+L
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186
+ +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLK 131
Query: 187 AYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ESV 237
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 238 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASR 294
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 192 VYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248
Query: 295 CLQYEPRERP 304
CL+ + ERP
Sbjct: 249 CLKKKRDERP 258
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 252
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 253 ECLKKKRDERP 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 186 NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL + SR S+ S ++ + PE +R P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 248 ECLKKKRDERP 258
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 19 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 132
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 193 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 249
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 250 ECLKKKRDERP 260
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 22 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 135
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 196 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 252
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 253 ECLKKKRDERP 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 37 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 150
Query: 186 NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL + SR S+ S ++ + PE +R P +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 211 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 267
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 268 ECLKKKRDERP 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 17 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 130
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 191 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 247
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 248 ECLKKKRDERP 258
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 24 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 81
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 82 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 140
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 141 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 198
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 199 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 247
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 248 DRPTFDYLRSVL 259
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 35 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 92
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 93 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 151
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 152 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 210 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 258
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 259 DRPTFDYLRSVL 270
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 31 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 88
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 89 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 147
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 148 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 205
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 206 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 254
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 255 DRPTFDYLRSVL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 30 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 87
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 88 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 146
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 147 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 204
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 205 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 253
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 254 DRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 145
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 146 LSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 204 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 253 DRPTFDYLRSVL 264
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 44 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 157
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 218 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 274
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 275 ECLKKKRDERP 285
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 186 NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY-----STNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL + SR S+ S ++ + PE +R P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 275
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 276 ECLKKKRDERP 286
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDT 145
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 146 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 203
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 204 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 252
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 253 DRPTFDYLRSVL 264
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK N A P P+Q VG LR R N+L G
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ + +V ++ +L HL ET + + + AQ ++Y +K ++ DL
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKS-IIHRDL 158
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I ED ++ FGL S + S ++ + PE +R P +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLAS 293
+Y+FG +L +L++G+ +P S+ + RD+ + M+ L + + RL +
Sbjct: 219 DVYAFGIVLYELMTGQ-LPYSNINN--RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMA 275
Query: 294 RCLQYEPRERP 304
CL+ + ERP
Sbjct: 276 ECLKKKRDERP 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----A 168
+ LLG +G L+V E M + L +L E +P + L+ ++ + A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFT 222
+ Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P+ RP +V L
Sbjct: 260 RV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----A 168
+ LLG +G L+V E M + L +L E +P + L+ ++ + A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFT 222
+ Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 138 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 256
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P+ RP +V L
Sbjct: 257 RV------TDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 39/281 (13%)
Query: 67 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 119
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLF----HWETHPM----KWAMRLRVVLHLAQAL 171
LLG +G L++ E M L +L E +P+ + +++ +A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 172 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 225
Y + + ++ DL A ED ++ FG+ ++ + Y + + PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 280
L+ G T S ++SFG +L ++ + P L + + L D+C
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC----- 252
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
D EL+R+ C QY P+ RP S + +S +++E E
Sbjct: 253 -PDMLLELMRM---CWQYNPKMRP---SFLEIISSIKEEME 286
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVG 257
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 316
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 375 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 425 RPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 16/258 (6%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++A+K + P FLEEA+ + +L++++L L E + +V
Sbjct: 25 VWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVT 82
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L E +K + + +A + Y + ++ DL + IL
Sbjct: 83 EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNYIHRDLRSANILVGNG 141
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 142 LICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 249 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 308
++ +P + +R + + D L L C + +P ERP +
Sbjct: 200 VTKGRVPYPG----MNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEY 255
Query: 309 LVTALSPLQKETEFSISP 326
L + L TE P
Sbjct: 256 LQSFLEDYFTATEPQYQP 273
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 316
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 375 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 425 RPTFEYLQAFLEDYFTSTEPQXQP 448
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 63 NIVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRN 115
++ E G+ + +VY+G K E + R+AVK N A R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL---- 167
+ + LLG +G L+V E M + L +L E +P + L+ ++ +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 168 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAF 221
A + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCL 276
PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
E T+L+R+ C Q+ P+ RP +V L
Sbjct: 259 ERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 316
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 317 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 375 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 424
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 425 RPTFEYLQAFLEDYFTSTEPQYQP 448
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 63 NIVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRN 115
++ E G+ + +VY+G K E + R+AVK N A R +FL EA +
Sbjct: 20 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 116 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL---- 167
+ + LLG +G L+V E M + L +L E +P + L+ ++ +
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 168 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAF 221
A + Y +K + ++ DL A + D ++ FG+ ++ + Y + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 222 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCL 276
PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
E T+L+R+ C Q+ P+ RP +V L
Sbjct: 259 ERV------TDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 28/267 (10%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET L + L + + + Y
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET-------LLGMCLDVCEGMAY-LE 120
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
+ ++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELV 289
+ +S ++SFG L+ ++ S IP + N +++ D + T +
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYEN------RSNSEVVEDISTGFRLYKPRLASTHVY 234
Query: 290 RLASRCLQYEPRERPNPKSLVTALSPL 316
++ + C + P +RP L+ L+ +
Sbjct: 235 QIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 27 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 84
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 85 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 143
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 144 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 202 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 251
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 252 RPTFEYLQAFLEDYFTSTEPQYQP 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 24 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVT 81
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 82 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 140
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 141 LVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 199 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 248
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 249 RPTFEYLQAFLEDYFTSTEPQYQP 272
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----A 168
+ LLG +G L+V E M + L +L E +P + L+ ++ + A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFT 222
+ Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 140 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P+ RP +V L
Sbjct: 259 RV------TDLMRM---CWQFNPKMRPTFLEIVNLL 285
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 69
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET M L V +A E C
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLL---GMCLDVCEGMAYLEEACV- 125
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 126 ----IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 232 VTPESVIYSFGTLLLDLLSGKHIP 255
+ +S ++SFG L+ ++ S IP
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGEN 399
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 400 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 458 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 507
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 508 RPTFEYLQAFLEDYFTSTEPQXQP 531
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 25 VWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 82
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM N +L L + L + +A+ + + + ++ +L A IL +
Sbjct: 83 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRNLRAANILVSDT 141
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 142 LSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 199
Query: 249 LSGKHIP------PSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
++ IP P +L +R +M+ D+C E EL +L C + P
Sbjct: 200 VTHGRIPYPGMTNPEVIQNL--ERGYRMVRPDNCPE---------ELYQLMRLCWKERPE 248
Query: 302 ERPNPKSLVTAL 313
+RP L + L
Sbjct: 249 DRPTFDYLRSVL 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 113/267 (42%), Gaps = 28/267 (10%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET M L V +A E C
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET---LLGMCLDVCEGMAYLEEACV- 122
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 123 ----IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELV 289
+ +S ++SFG L+ ++ S IP + N +++ D + T +
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEVVEDISTGFRLYKPRLASTHVY 232
Query: 290 RLASRCLQYEPRERPNPKSLVTALSPL 316
++ + C + P +RP L+ L+ +
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET M L V +A E C
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET---LLGMCLDVCEGMAYLEEACV- 124
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 125 ----IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 232 VTPESVIYSFGTLLLDLLSGKHIP 255
+ +S ++SFG L+ ++ S IP
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----A 168
+ LLG +G L+V E M + L +L E +P + L+ ++ + A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFT 222
+ Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 141 DGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P RP +V L
Sbjct: 260 RV------TDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 124 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 181
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 242 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 297
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 298 MRPSFSELVSRISAI 312
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K A + F+EEA + +L + +L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 71
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET M L V +A E C
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL---GMCLDVCEGMAYLEEACV- 127
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 128 ----IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 232 VTPESVIYSFGTLLLDLLSGKHIP 255
+ +S ++SFG L+ ++ S IP
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 98 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 155
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 216 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 271
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 272 MRPSFSELVSRISAI 286
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 104 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 161
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 222 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 277
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 278 MRPSFSELVSRISAI 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 103 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 160
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 221 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 276
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 277 MRPSFSELVSRISAI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 105 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 223 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 278
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 279 MRPSFSELVSRISAI 293
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 88
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGEN 147
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 148 LVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 206 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 256 RPTFEYLQAFLEDYFTSTEPQYQP 279
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 31 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 88
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 89 EYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGEN 147
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 148 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + EP E
Sbjct: 206 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKEPEE 255
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 256 RPTFEYLQAFLEDYFTSTEPQYQP 279
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +++ +
Sbjct: 113 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHAGA 170
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 231 RPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 274
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 125 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 182
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 243 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 298
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 299 MRPSFSELVSRISAI 313
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 101 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 158
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 219 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 274
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 275 MRPSFSELVSRISAI 289
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
F E A + +L + L G C GDE +LV E++ +L +L + + +L
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLE 117
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILF--DED---GNP---RLSTFGLMKNSRDGKS 214
V LA A+ + + ++ ++ A IL +ED GNP +LS G+
Sbjct: 118 VAKQLAAAMHFL-EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
+ + PPE + + + + +SFGT L ++ SG P S ALD R LQ D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQFYED 233
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
Q EL L + C+ YEP RP+ ++++ L+ L
Sbjct: 234 ---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
V E G +V+ G N+ ++A+K + + F+EEA + +L + +L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLY 88
Query: 123 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
G C E LV E+M + L+ + LF ET M L V +A E C
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET---LLGMCLDVCEGMAYLEEACV- 144
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGR 231
++ DL A L E+ ++S FG+ + D + S+ + + PE R
Sbjct: 145 ----IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 232 VTPESVIYSFGTLLLDLLSGKHIP 255
+ +S ++SFG L+ ++ S IP
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVC 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 23 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 80
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 81 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 139
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 140 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 198 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 247
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 248 RPTFEYLQAFLEDYFTSTEPQYQP 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKS 214
+ ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 113 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 171
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 269
+ + +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 172 FP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 230 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 274
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 25 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 82
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 83 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 141
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 142 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 200 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 249
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 250 RPTFEYLQAFLEDYFTSTEPQYQP 273
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLAAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
++ E G VV GK + Q +AVK + + +F +EA+++ +L + +L
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFY 69
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYCTSKGRA 180
G C + +V EY+ N L +L +H ++ + L + + + + + S +
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESH-QF 125
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPE 235
++ DL A L D D ++S FG+ + D + S+ + ++ PE + + +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 295
S +++FG L+ ++ S +P DL + + + + ++ C
Sbjct: 186 SDVWAFGILMWEVFSLGKMP----YDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC 241
Query: 296 LQYEPRERPNPKSLVTALSPLQKE 319
P +RP + L++++ PL+++
Sbjct: 242 WHELPEKRPTFQQLLSSIEPLREK 265
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVI 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 53 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKS 214
+ ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 113 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 171
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 269
+ + +T PE L + + +S +++FG LL ++ + P PS +L+
Sbjct: 172 FP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 270 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 230 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 274
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVI 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + ++R+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVT 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 24/264 (9%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCC 125
G + VYKGK +AVK ++ P P QF V LR R N+L G
Sbjct: 45 GSGSFGTVYKGKWHGD--VAVKIL-KVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 126 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
+ D +V ++ +L KHL ET + + + + AQ ++Y +K ++ D+
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLHAKN-IIHRDM 158
Query: 186 NAYRILFDEDGNPRLSTFGLM------KNSRDGKSYSTNLAFTPPEYLRTGRVTP---ES 236
+ I E ++ FGL S+ + + ++ + PE +R P +S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTDDDGTELVRLAS 293
+YS+G +L +L++G+ +P SH + RD+ + M+ + + + RL +
Sbjct: 219 DVYSYGIVLYELMTGE-LPYSHINN--RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVA 275
Query: 294 RCLQYEPRERPNPKSLVTALSPLQ 317
C++ ERP +++++ LQ
Sbjct: 276 DCVKKVKEERPLFPQILSSIELLQ 299
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 236
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 237 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 281
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 17/223 (7%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
F E A + +L + L G C GDE +LV E++ +L +L + + +L
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLE 117
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILF--DED---GNP---RLSTFGLMKNSRDGKS 214
V LA A+ + + ++ ++ A IL +ED GNP +LS G+
Sbjct: 118 VAKQLAWAMHFL-EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 215 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
+ + PPE + + + + +SFGT L ++ SG P S ALD R LQ D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALD--SQRKLQFYED 233
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
Q EL L + C+ YEP RP+ ++++ L+ L
Sbjct: 234 ---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 201 VWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 258
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 259 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 317
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 318 LVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 376 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKDPEE 425
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 426 RPTFEYLQAFLEDYFTSTEPQXQP 449
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 236
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 237 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 281
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 28/264 (10%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 34 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVM 91
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 92 EYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 150
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 151 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 249 LSGKHIP-PS----HALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 302
+ +P P LD + +R +M C E L L +C + +P E
Sbjct: 209 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPES---------LHDLMCQCWRKDPEE 258
Query: 303 RPNPKSLVTALSPLQKETEFSISP 326
RP + L L TE P
Sbjct: 259 RPTFEYLQAFLEDYFTSTEPQYQP 282
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----A 168
+ LLG +G L+V E M + L +L E +P + L+ ++ + A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFT 222
+ Y +K + ++ +L A + D ++ FG+ ++ + Y + +
Sbjct: 142 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P RP +V L
Sbjct: 261 RV------TDLMRM---CWQFNPNMRPTFLEIVNLL 287
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 117 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 174
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 233
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 234 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 117 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 174
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 233
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 234 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 64 IVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNN 116
++ E G+ + +VY+G K E + R+AVK N A R +FL EA + +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLH----LA 168
+ LLG +G L+V E M + L +L E +P + L+ ++ +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFT 222
+ Y +K + ++ +L A + D ++ FG+ ++ + Y + +
Sbjct: 141 DGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLE 277
PE L+ G T S ++SFG +L ++ S P L + D D+C E
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
T+L+R+ C Q+ P RP +V L
Sbjct: 260 RV------TDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 127
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 128 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 185
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 244
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 245 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 289
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ ++Y SK + ++ DL A
Sbjct: 105 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 223 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 278
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 279 MRPSFSELVSRISAI 293
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---- 217
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+
Sbjct: 117 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGA 174
Query: 218 --NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 233
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 234 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
+ C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---- 217
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+
Sbjct: 116 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGA 173
Query: 218 --NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 232
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 233 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 118
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 119 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 176
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 235
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
+ C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 236 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 135
V+ G N ++AVK + + FLEEA + L++++L L + ++
Sbjct: 29 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EYM +L L E + + +A+ + Y K ++ DL A +L E
Sbjct: 88 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 146
Query: 196 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 249 LSGKHIP 255
++ IP
Sbjct: 205 VTYGKIP 211
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 145
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 263 GSAKELI 269
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 63 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
+V + G V+ G N ++AVK + + FLEEA + L++++L L
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
+ + ++ E+M +L L E + + +A+ + Y K ++
Sbjct: 74 AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPE 235
DL A +L E +++ FGL + +R+G + + +T PE + G T +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIK 190
Query: 236 SVIYSFGTLLLDLLSGKHIP 255
S ++SFG LL ++++ IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 236
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ C E + EL+R C Q+ P +RP+ + A + +E
Sbjct: 237 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C +V EYMP L +L + + L
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 134 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHVVKVADFGLSR-LMTGDTYTAHAGA 191
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ +T PE L + +S +++FG LL ++ + + P +DL + +L
Sbjct: 192 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYDLLEKGYRM 250
Query: 276 LEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+ + EL+R C ++ P +RP+
Sbjct: 251 EQPEGCPPKVYELMR---ACWKWSPADRPS 277
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 120 YMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 177
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 236
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ C E + EL+R C Q+ P +RP+ + A + +E
Sbjct: 237 ERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 321
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 322 YMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 379
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 438
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 439 ERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSIS 483
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 261
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 262 GSAKELL 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 319 YMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 376
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 435
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 436 ERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSIS 480
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ +L A L E+ +++ FGL + G +Y+ +
Sbjct: 361 YMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 418
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 477
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
+ C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 478 ERPEGCPEKVY------ELMRA---CWQWNPSDRPSFAEIHQAFETMFQESSIS 522
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 146
+AVK + + F EA + L++ + G C EGD ++V EYM + L K
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 147 L--------FHWETHP---MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
L E +P + + L + +A + Y S+ ++ DL L E+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 164
Query: 196 GNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
++ FG+ ++ Y + + PPE + + T ES ++S G +L ++
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 250 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNP 306
+ P L + ++ +T +G+ T E+ L C Q EP R N
Sbjct: 225 TYGKQP---WYQLSNNEVIECIT----QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNI 277
Query: 307 KSLVTALSPLQKETEFSISPL 327
K + T L L K + + L
Sbjct: 278 KGIHTLLQNLAKASPVYLDIL 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 26/235 (11%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLL 115
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKS 214
+ ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 116 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 174
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 269
+ + +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 175 FP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 231
Query: 270 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFS 323
M + C E + EL+R C Q+ P +RP+ + A + +E+ S
Sbjct: 232 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
+ ++ A+EY K ++ DL A L E+ +++ FGL + G +Y+ +
Sbjct: 115 YMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGA 172
Query: 219 ---LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQM 270
+ +T PE L + + +S +++FG LL ++ + + P +DL + +++ +M
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYRM 231
Query: 271 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+ C E + EL+R C Q+ P +RP+
Sbjct: 232 ERPEGCPEKVY------ELMR---ACWQWNPSDRPS 258
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 143
+AVK P R + +E + L + + GCC + E+ LV EY+P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y S+ ++ +L A +L D D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-HYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNP 306
PP+ L+LI QM LT+ G+ D E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 307 KSLVTALSPLQKE 319
++L+ L + ++
Sbjct: 282 ENLIPILKTVHEK 294
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ ++ +
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRNIKS 145
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 206 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 263 GSAKELI 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 262 GSAKELL 268
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 69 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 127
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ ++++ G+ PP + +R L + T+ E Q + +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 304 PNPKSLV 310
+ K L+
Sbjct: 262 GSAKELL 268
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 165 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 222
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 282
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 283 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 338
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 339 MRPSFSELVSRISAI 353
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 115/301 (38%), Gaps = 50/301 (16%)
Query: 65 VSEHGEKAPNVVYKGK------LENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNR 117
V + GE A V++ + E +AVK A D + F EA + + N
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH----------------------PM 155
+ LLG C G L+ EYM L + L H P+
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 156 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 215
A +L + +A + Y + + + ++ DL L E+ +++ FGL +N Y
Sbjct: 172 SCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 216 STN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIR 264
+ + + PPE + R T ES ++++G +L ++ S P + +R
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
Query: 265 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEFSI 324
D N+ ++C EL L C P +RP+ S+ L + + E ++
Sbjct: 291 DGNILACPENC---------PLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTV 341
Query: 325 S 325
Sbjct: 342 G 342
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 12/193 (6%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL + I
Sbjct: 98 MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 192 ---FDEDGN--PRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGT 243
DE+ +++ FGL + S S N + PE + T ++ YSF
Sbjct: 157 LQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+L +L+G+ P + + + M+ + L +D L + C +P++R
Sbjct: 217 ILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 304 PNPKSLVTALSPL 316
P+ +V LS L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 107 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 164
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 225 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 280
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 281 MRPSFSELVSRISAI 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 163
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 163
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 224 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 279
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA + ++++ L LLG C ++ E+M L +L + + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKS 214
+ ++ A+EY K ++ DL A L E+ +++ FGL + + G
Sbjct: 120 YMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 178
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQ 269
+ + +T PE L + + +S +++FG LL ++ + + P +DL + +++ +
Sbjct: 179 FP--IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYELLEKDYR 235
Query: 270 M-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 320
M + C E + EL+R C Q+ P +RP+ + A + +E+
Sbjct: 236 MERPEGCPEKVY------ELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 280 RDLALRVDQIR 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 24/253 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 143
+AVK P R + +E + L + + GCC + E+ LV EY+P +L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y ++ ++ +L A +L D D ++ F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNP 306
PP+ L+LI QM LT+ G+ D E+ L C + E RP
Sbjct: 222 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTF 281
Query: 307 KSLVTALSPLQKE 319
++L+ L + ++
Sbjct: 282 ENLIPILKTVHEK 294
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 104 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 161
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 222 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 277
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 278 MRPSFSELVSRISAI 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 110
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 111 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 168
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 169 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 228
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 229 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 284
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 285 MRPSFSELVSRISAI 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 20/255 (7%)
Query: 76 VYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
VY G L + ++I AVK NR+ + QFL E + + + +LLG C +
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 106
Query: 131 R-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 189
L+V YM + L ++ ETH + L +A+ +++ SK + ++ DL A
Sbjct: 107 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARN 164
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYSF 241
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++SF
Sbjct: 165 CMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 224
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G LL +L++ + PP ++ + L+ ++ D L + +C +
Sbjct: 225 GVLLWELMT-RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---PLYEVMLKCWHPKAE 280
Query: 302 ERPNPKSLVTALSPL 316
RP+ LV+ +S +
Sbjct: 281 MRPSFSELVSRISAI 295
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ +L IL + + ++ FG
Sbjct: 103 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFG 160
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K Y + + + PE L + + S ++SFG +L +L +
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 221 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 281 RDLALRVDQIR 291
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 44/252 (17%)
Query: 87 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 146 HLFHWET------------------HPMKWAMRLRVVLHLA----QALEYCTSKGRALYH 183
L HP + A+ + ++ A Q ++Y ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 237
DL A IL E ++S FGL ++ + SY + + E L T +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 238 IYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 293 SRCLQYEPRERP 304
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCE-GDERL-LVAEYMPNETL 143
+AVK A P R + +E + L + + GCC + G L LV EY+P +L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y ++ ++ DL A +L D D ++ F
Sbjct: 123 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G + + + PE L+ + S ++SFG L +LL+
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNP 306
PP+ L+LI QM LT+ G+ D E+ L C + E RP
Sbjct: 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTF 298
Query: 307 KSLVTALSPLQKETE 321
++L+ L + ++ +
Sbjct: 299 ENLIPILKTVHEKYQ 313
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ R++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 283 RDLALRVDQIR 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 22/253 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 251 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 310
Query: 307 KSLVTALSPLQKE 319
+ L + ++ +
Sbjct: 311 RDLALRVDQIRDQ 323
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 22/253 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 218 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 277
Query: 307 KSLVTALSPLQKE 319
+ L + ++ +
Sbjct: 278 RDLALRVDQIRDQ 290
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 226 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 285
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 286 RDLALRVDQIR 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 280 RDLALRVDQIR 290
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL + I
Sbjct: 98 MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 192 ---FDEDGN--PRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGT 243
DE+ +++ FG + S S N + PE + T ++ YSF
Sbjct: 157 LQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+L +L+G+ P + + + M+ + L +D L + C +P++R
Sbjct: 217 ILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 304 PNPKSLVTALSPL 316
P+ +V LS L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 225 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 284
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 285 RDLALRVDQIR 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 105 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 283 RDLALRVDQIR 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 227 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 286
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 287 RDLALRVDQIR 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 220 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 279
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 280 RDLALRVDQIR 290
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 78 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 255 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 224 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 283
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 284 RDLALRVDQIR 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 298 RDLALRVDQIR 308
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 238 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 297
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 298 RDLALRVDQIR 308
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ EY+P +L
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 219 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 279 RDLALRVDQIR 289
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L E ++++
Sbjct: 84 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 261 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 191
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL + I
Sbjct: 98 MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIF 156
Query: 192 ---FDEDGN--PRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTGR--VTPESVIYSFGT 243
DE+ +++ F L + S S N + PE + T ++ YSF
Sbjct: 157 LQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 244 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+L +L+G+ P + + + M+ + L +D L + C +P++R
Sbjct: 217 ILYTILTGEG--PFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 304 PNPKSLVTALSPL 316
P+ +V LS L
Sbjct: 275 PHFSYIVKELSEL 287
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 83 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 260 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 80 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 257 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 25/231 (10%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSY 215
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 289 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347
Query: 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM- 270
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M
Sbjct: 348 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 405
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
++C E EL + RC + P ERP + + + L TE
Sbjct: 406 RPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 144
+AVK+ R F E + L+++ + G C R L+ E++P +L
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
++L + L+ + + +EY +K R ++ DL IL + + ++ FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 205 LMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHI 254
L K K + + + PE L + + S ++SFG +L +L +
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRERPNP 306
PP+ + +I D+ QM+ +E G+ DG E+ + + C +RP+
Sbjct: 223 PPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 282
Query: 307 KSLVTALSPLQ 317
+ L + ++
Sbjct: 283 RDLALRVDQIR 293
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 28/252 (11%)
Query: 83 NQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+ ++A+KR N + L+E +++ Q + + + DE LV + +
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 142 T---LAKHLFHWETHPM------KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
+ + KH+ H A LR VL + LEY G+ ++ D+ A IL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVL---EGLEYLHKNGQ-IHRDVKAGNILL 154
Query: 193 DEDGNPRLSTFGL---------MKNSRDGKSYSTNLAFTPPEYLRTGRVTP-ESVIYSFG 242
EDG+ +++ FG+ + ++ K++ + PE + R ++ I+SFG
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 243 TLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
++L +G PP L L + L + + G ++ S CLQ
Sbjct: 215 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQK 274
Query: 299 EPRERPNPKSLV 310
+P +RP L+
Sbjct: 275 DPEKRPTAAELL 286
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 28/252 (11%)
Query: 83 NQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+ ++A+KR N + L+E +++ Q + + + DE LV + +
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 142 T---LAKHLFHWETHPM------KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 192
+ + KH+ H A LR VL + LEY G+ ++ D+ A IL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVL---EGLEYLHKNGQ-IHRDVKAGNILL 149
Query: 193 DEDGNPRLSTFGL---------MKNSRDGKSYSTNLAFTPPEYLRTGRVTP-ESVIYSFG 242
EDG+ +++ FG+ + ++ K++ + PE + R ++ I+SFG
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 243 TLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 298
++L +G PP L L + L + + G ++ S CLQ
Sbjct: 210 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQK 269
Query: 299 EPRERPNPKSLV 310
+P +RP L+
Sbjct: 270 DPEKRPTAAELL 281
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 118
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 31/262 (11%)
Query: 82 ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++ +AVK + F EA + L++ + G C +GD ++V EYM +
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 142 TLAKH----------LFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRALYHDLNA 187
L K L + K + L +LH +A + Y S+ ++ DL
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLAT 161
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
L + ++ FG+ ++ Y + + PPE + + T ES ++SF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQY 298
G +L ++ + P L ++ +T +G+ + E+ + C Q
Sbjct: 222 GVILWEIFTYGKQP---WFQLSNTEVIECIT----QGRVLERPRVCPKEVYDVMLGCWQR 274
Query: 299 EPRERPNPKSLVTALSPLQKET 320
EP++R N K + L L K T
Sbjct: 275 EPQQRLNIKEIYKILHALGKAT 296
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 135
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 136 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL-----------FHWET 152
+E + +G+ +N + NLLG C + ++ EY L ++L F+
Sbjct: 84 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 153 HPMKWAMRLRVV---LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+P + +V +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 210 R--DGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
D +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 261 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 22/257 (8%)
Query: 69 GEKAPNVVYKG----KLENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLG 123
G+ VVY G + +N+ + A+K +R+ FL E + L + + L+G
Sbjct: 30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 124 CCC--EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
EG +L+ YM + L + + + +P + + L +A+ +EY + + +
Sbjct: 90 IMLPPEGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQ-KFV 146
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVT 233
+ DL A + DE +++ FGL ++ D + YS + +T E L+T R T
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 234 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 293
+S ++SFG LL +LL+ + PP +D + + ++ D L ++
Sbjct: 207 TKSDVWSFGVLLWELLT-RGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---SLYQVMQ 262
Query: 294 RCLQYEPRERPNPKSLV 310
+C + +P RP + LV
Sbjct: 263 QCWEADPAVRPTFRVLV 279
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+++ +
Sbjct: 137 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 314 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ EY L ++L M+ + +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 145
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 146 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 222
+A+ + + + ++ DL A IL +++ FGL +R G + + +T
Sbjct: 283 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGL---ARVGAKFP--IKWT 336
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLE 277
PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M ++C E
Sbjct: 337 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE 396
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 321
EL + RC + P ERP + + + L TE
Sbjct: 397 ---------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 431
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMG-FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + S L
Sbjct: 113 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTL 171
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 172 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 222
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 223 EFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V EYM N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 31 ENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVK 90
E+ E+ ++ G SF + L + K FA++ + K V+ +E + K
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL------KKDVVLMDDDVECT--MVEK 69
Query: 91 RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFH 149
R +AW P LT++ C + E L V EY+ L H+
Sbjct: 70 RVLSLAWEHPF----------------LTHMF-CTFQTKENLFFVMEYLNGGDLMYHI-- 110
Query: 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
H + + L++ SKG +Y DL IL D+DG+ +++ FG+ K +
Sbjct: 111 QSCHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKEN 169
Query: 210 RDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 261
G + + TP PE L + +SFG LL ++L G+ P H D
Sbjct: 170 MLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWA-M 159
R FL EA +GQ + + L G G ++V EYM N +L L TH ++ M
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIM 151
Query: 160 RLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS 216
+L +L + + Y + G ++ DL A +L D + ++S FGL + D +Y+
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 162
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSY 215
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 116 FSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 216 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM- 270
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M
Sbjct: 175 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 232
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
++C E EL + RC + P ERP + + + L
Sbjct: 233 RPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V E M N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G A++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMG-AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 87 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 146 HLFHWET------------------HPMKWAMRLRVVLHLA----QALEYCTSKGRALYH 183
L HP + A+ + ++ A Q ++Y ++ + ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL-AEMKLVHR 174
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 237
DL A IL E ++S FGL ++ + S + + E L T +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 238 IYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 293 SRCLQYEPRERP 304
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 24/255 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 143
+AVK P R + E + L + + GCC + E+ LV EY+P +L
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y ++ ++ L A +L D D ++ F
Sbjct: 101 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDF 156
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 216
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNP 306
P + +LI QM LT+ G+ D E+ L C + E RP
Sbjct: 217 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 276
Query: 307 KSLVTALSPLQKETE 321
++LV L Q++ +
Sbjct: 277 QNLVPILQTAQEKYQ 291
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 24/255 (9%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 143
+AVK P R + E + L + + GCC + E+ LV EY+P +L
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 144 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 203
+L H + A L + + + Y ++ ++ L A +L D D ++ F
Sbjct: 100 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-HYIHRALAARNVLLDNDRLVKIGDF 155
Query: 204 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 253
GL K +G Y + + + PE L+ + S ++SFG L +LL+
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 215
Query: 254 IPPSHALDLIRDRNLQM----LTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNP 306
P + +LI QM LT+ G+ D E+ L C + E RP
Sbjct: 216 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTF 275
Query: 307 KSLVTALSPLQKETE 321
++LV L Q++ +
Sbjct: 276 QNLVPILQTAQEKYQ 290
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L ++++
Sbjct: 84 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 261 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L ++++
Sbjct: 73 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 249
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 250 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 114 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL 172
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 173 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 223
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 224 EFTFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L ++++
Sbjct: 76 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 253 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + +LLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L ++++
Sbjct: 77 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 253
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 254 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 160
+E + +G+ +N + NLLG C + ++ EY L ++L ++++
Sbjct: 125 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 182
Query: 161 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 302 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWA-M 159
R FL EA +GQ + + L G G ++V EYM N +L L TH ++ M
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIM 151
Query: 160 RLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSY 215
+L +L + + Y + G ++ DL A +L D + ++S FGL +++ D
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 216 STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
+T + +T PE + + S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 138 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 196
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 197 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 247
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 248 EFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ Y L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 113 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL 171
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 172 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 222
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 223 EFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 128
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 129 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 187
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 188 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 238
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 239 EFTFPDFVTEGARDLISRLLKHNPSQRP 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 115
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 116 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 175 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 225
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 226 EFTFPDFVTEGARDLISRLLKHNPSQRP 253
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--------------FH 149
+E + +G+ +N + NLLG C + ++ EY L ++L H
Sbjct: 69 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ + +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 246 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + LLG C + ++ EY L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P + K L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTA 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 117 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 176 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 226
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 227 EFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 108
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 109 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 167
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 168 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 218
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 219 EFTFPDFVTEGARDLISRLLKHNPSQRP 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 110
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 111 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 169
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 170 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 220
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 221 EFTFPDFVTEGARDLISRLLKHNPSQRP 248
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 117 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 176 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 226
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 227 EFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 37/236 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+E + +G+ +N + NLLG C + ++ Y L ++L M+++ +
Sbjct: 91 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 164 V--------------LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 207
V LA+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 208 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
L+++ + +C EL + C P +RP K LV L
Sbjct: 268 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 144
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 244 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++++++ G+ + PP A+ +IRD +NL ++ S L+G F D
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS-LKG-FLD----------- 251
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEFSISPLCR 329
R L +P +R L+ + SI PL R
Sbjct: 252 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMR 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--------------FH 149
+E + +G+ +N + NLLG C + ++ EY L ++L H
Sbjct: 84 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 150 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 209
+ + +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 210 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 258
Y +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 259 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
L+++ + +C EL + C P +RP K LV L
Sbjct: 261 LFKLLKEGHRMDKPSNCT---------NELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 84/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P + K L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTA 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 117 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTL 175
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 176 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 226
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 227 EFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 98 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 153
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 213
Query: 244 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++++++ G+ + PP A+ +IRD +NL ++ S L+G F D
Sbjct: 214 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS-LKG-FLD----------- 260
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEFSISPLCR 329
R L +P +R L+ + SI PL R
Sbjct: 261 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMR 296
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 100 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 155
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 215
Query: 244 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++++++ G+ + PP A+ +IRD +NL ++ S L+G F D
Sbjct: 216 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS-LKG-FLD----------- 262
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEFSISPLCR 329
R L +P +R L+ + SI PL R
Sbjct: 263 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMR 298
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G G ++V E+M N L L H ++ +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVI 145
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--YS 216
V + +A + Y G ++ DL A IL + + ++S FGL + D Y+
Sbjct: 146 QLVGMLRGIAAGMRYLADMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 271
T + +T PE ++ + T S ++S+G ++ +++S P D + Q +
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV 257
Query: 272 TDSCLEGQFTD---DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ EG D L +L C Q E ERP + +V L +
Sbjct: 258 IKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 113
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 114 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 172
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 173 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 223
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 224 EFTFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 220 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 275
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 244 LLLDLLSGK----HIPPSHALDLIRD 265
++++++ G+ + PP A+ +IRD
Sbjct: 336 MVIEMVDGEPPYFNEPPLKAMKMIRD 361
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 93 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 148
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 208
Query: 244 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++++++ G+ + PP A+ +IRD +NL ++ S L+G F D
Sbjct: 209 MVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS-LKG-FLD----------- 255
Query: 294 RCLQYEPRERPNPKSLVTALSPLQKETEFSISPLCR 329
R L +P +R L+ + SI PL R
Sbjct: 256 RLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMR 291
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 112
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 113 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 171
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 172 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 222
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 223 EFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + + L
Sbjct: 117 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 175
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR E V ++S G L + L GK PP A Q
Sbjct: 176 DYLPPEXIE-GRXHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 226
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 227 EFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + +L + +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 288
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 289 -VYRIMTQCWQHQPEDRPN 306
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 128 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
GDE +V E++ L + H + + A V L + QAL ++G ++ D+ +
Sbjct: 143 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQG-VIHRDIKS 198
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 243
IL DG +LS FG L TP PE + PE I+S G
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 244 LLLDLLSGK----HIPPSHALDLIRD 265
++++++ G+ + PP A+ +IRD
Sbjct: 259 MVIEMVDGEPPYFNEPPLKAMKMIRD 284
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 115 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL 173
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 174 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 224
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 44/252 (17%)
Query: 87 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+AVK A P + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 146 HLFHWET------------------HPMKWAMRLRVVLHLA----QALEYCTSKGRALYH 183
L HP + A+ + ++ A Q ++Y ++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS-LVHR 174
Query: 184 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 237
DL A IL E ++S FGL ++ + S + + E L T +S
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 238 IYSFGTLLLDL--LSGK---HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
++SFG LL ++ L G IPP +L++ + D+C E E+ RL
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSE---------EMYRLM 285
Query: 293 SRCLQYEPRERP 304
+C + EP +RP
Sbjct: 286 LQCWKQEPDKRP 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS--TNLAFT 222
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 136 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 194
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
PE + T + +SFG L+ ++L+G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS--TNLAFT 222
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
PE + T + +SFG L+ ++L+G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 137
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 138 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL 196
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 197 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 247
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 248 EFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 117 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 175
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 176 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 226
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 227 EFTFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + +L + +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 274
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 275 -VYRIMTQCWQHQPEDRPN 292
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L G +++ FG ++ + L
Sbjct: 112 TYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A Q
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA------NTYQETYKRISRV 221
Query: 279 QFT-DDDGTELVR-LASRCLQYEPRERP 304
+FT D TE R L SR L++ P +RP
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS--TNLAFT 222
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 135 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 193
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
PE + T + +SFG L+ ++L+G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 118 LTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS 176
LT++ C + E L V EY+ L H+ H + + L++ S
Sbjct: 80 LTHMF-CTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRV 232
KG +Y DL IL D+DG+ +++ FG+ K + G + + TP PE L +
Sbjct: 137 KG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 233 TPESVIYSFGTLLLDLLSGKHIPPSHALD 261
+SFG LL ++L G+ P H D
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQ--SPFHGQD 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 23/256 (8%)
Query: 76 VYKGKLENQRR-----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 129
VYKG L+ +A+K R FL EA +GQ ++ + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 130 ERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 187
+++ EYM N L K L E ++ LR +A ++Y + ++ DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLANM-NYVHRDLAA 175
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRVTPESVIYS 240
IL + + ++S FGL + D +Y+T+ + +T PE + + T S ++S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 241 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
FG ++ ++++ P +L ++ + D D + + +L +C Q E
Sbjct: 236 FGIVMWEVMTYGERP---YWELSNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQER 291
Query: 301 RERPNPKSLVTALSPL 316
RP +V+ L L
Sbjct: 292 ARRPKFADIVSILDKL 307
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTA 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK + ++ D+ +L G +++ FG ++ + + L
Sbjct: 112 TYITELANALSYCHSK-KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL 170
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
+ PPE + GR+ E V ++S G L + L GK PP A + +D ++ S +E
Sbjct: 171 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVGK--PPFEA-NTYQDTYKRI---SRVEF 223
Query: 279 QFTDDDGTELVRLASRCLQYEPRERP 304
F D L SR L++ P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 99 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 273
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 274 -VYRIMTQCWQHQPEDRPN 291
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V E M N +L L H ++ +
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVI 118
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 119 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 99 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 273
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 274 -VYRIMTQCWQHQPEDRPN 291
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 288
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 289 -VYRIMTQCWQHQPEDRPN 306
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 21/214 (9%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q ++ +T G +G + ++ EY+ + L + A L+ +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
L + L+Y S+ + ++ D+ A +L E G+ +L+ FG+ D + TP
Sbjct: 130 L---KGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCL 276
PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-----PPTL 240
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
G FT CL +P RP K L+
Sbjct: 241 VGDFT----KSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 31 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 90
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 91 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 149
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 209
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 210 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 265
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 266 -VYRIMTQCWQHQPEDRPN 283
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 24/259 (9%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 137 YMPNETLAKHLFHWETHPMKWA----MRLRVVLH----LAQALEYCTSKGRALYHDLNAY 188
Y L L + + LR +LH +AQ + + SK ++ D+ A
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 181
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFG 242
+L ++ FGL ++ + +Y + + PE + T +S ++S+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEP 300
LL ++ S P + L+ + +++ D Q F + + + C EP
Sbjct: 242 ILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACWALEP 296
Query: 301 RERPNPKSLVTALSPLQKE 319
RP + + + L +E
Sbjct: 297 THRPTFQQICSFLQEQAQE 315
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVL 165
E ++ LR+ + L ++ +V EY P L ++ + + RVV
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRVVF 114
Query: 166 -HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NL 219
+ A+ Y S+G A + DL +LFDE +L FGL + K Y +L
Sbjct: 115 RQIVSAVAYVHSQGYA-HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 220 AFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 278
A+ PE ++ + E+ ++S G LL L+ G +P D N+ L + G
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCG-FLP-------FDDDNVMALYKKIMRG 225
Query: 279 QFTDDD--GTELVRLASRCLQYEPRERPNPKSLVT 311
++ + L + LQ +P++R + K+L+
Sbjct: 226 KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + L G + ++V E M N +L L H ++ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVI 147
Query: 161 LRVVL--HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 216
V + +A ++Y + G ++ DL A IL + + ++S FGL + D +Y+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 217 TN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
T + +T PE + + T S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 57 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 116
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 175
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 235
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 236 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 291
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 292 -VYRIMTQCWQHQPEDRPN 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 21/235 (8%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q + +T G + + ++ EY+ + L + P++ ++
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATIL 122
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ + L+Y S+ R ++ D+ A +L E G+ +L+ FG+ D + TP
Sbjct: 123 REILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF 181
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---TDSCLE 277
PE ++ ++ I+S G ++L G+ PP+ DL R L ++ + LE
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGE--PPNS--DLHPMRVLFLIPKNSPPTLE 237
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA--LSPLQKETEFSISPLCRF 330
GQ + CL +PR RP K L+ ++ K+T F + R+
Sbjct: 238 GQHS----KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRY 288
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 56 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 115
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 174
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 175 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 234
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 235 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 290
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 291 -VYRIMTQCWQHQPEDRPN 308
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 30/285 (10%)
Query: 58 GFAVENIVSEH--GEKAPNVVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSV 110
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 111 GQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 170
L + + L+G E + ++ E P L H + +K + L + +A
Sbjct: 68 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 125
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PE 225
+ Y S ++ D+ IL +L FGL + D Y ++ P PE
Sbjct: 126 MAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQF 280
+ R T S ++ F + ++LS GK + + ++ + D C +
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 244
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL-QKETEFSI 324
T L +RC Y+P +RP LV +LS + Q E + ++
Sbjct: 245 T---------LMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAM 280
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 80 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 139
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 198
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 314
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 315 -VYRIMTQCWQHQPEDRPN 332
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 54 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 288
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 289 -VYRIMTQCWQHQPEDRPN 306
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 29/274 (10%)
Query: 58 GFAVENIVSEH--GEKAPNVVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSV 110
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 111 GQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 170
L + + L+G E + ++ E P L H + +K + L + +A
Sbjct: 64 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 121
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PE 225
+ Y S ++ D+ IL +L FGL + D Y ++ P PE
Sbjct: 122 MAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQF 280
+ R T S ++ F + ++LS GK + + ++ + D C +
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 240
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
T L +RC Y+P +RP LV +LS
Sbjct: 241 T---------LMTRCWDYDPSDRPRFTELVCSLS 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 29/274 (10%)
Query: 58 GFAVENIVSEH--GEKAPNVVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSV 110
G A E++V GE VY+G N + +AVK + D ++ F+ EA +
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 111 GQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 170
L + + L+G E + ++ E P L H + +K + L + +A
Sbjct: 80 KNLDHPHIVKLIGII-EEEPTWIIMELYPYGELG-HYLERNKNSLKVLTLVLYSLQICKA 137
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PE 225
+ Y S ++ D+ IL +L FGL + D Y ++ P PE
Sbjct: 138 MAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQF 280
+ R T S ++ F + ++LS GK + + ++ + D C +
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 256
Query: 281 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 314
T L +RC Y+P +RP LV +LS
Sbjct: 257 T---------LMTRCWDYDPSDRPRFTELVCSLS 281
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 28/263 (10%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 137 YMPNETLAKHLFH----WETHP----MKWAMRLRVVLH----LAQALEYCTSKGRALYHD 184
Y L L ET P + R +LH +AQ + + SK ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK-NCIHRD 189
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVI 238
+ A +L ++ FGL ++ + +Y + + PE + T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 239 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCL 296
+S+G LL ++ S P + L+ + +++ D Q F + + + C
Sbjct: 250 WSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACW 304
Query: 297 QYEPRERPNPKSLVTALSPLQKE 319
EP RP + + + L +E
Sbjct: 305 ALEPTHRPTFQQICSFLQEQAQE 327
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 46 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 105
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 164
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 165 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 224
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 225 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 280
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 281 -VYRIMTQCWQHQPEDRPN 298
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 104/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 274
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 275 -VYRIMTQCWQHQPEDRPN 292
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 39/263 (14%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCC 126
GE VVYK K R +A+KR A + P + E + +L + + +L+
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186
LV E+M + L K L +T +++ + L + + +C + R L+ DL
Sbjct: 90 SERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKI-YLYQLLRGVAHC-HQHRILHRDLK 146
Query: 187 AYRILFDEDGNPRLSTFGLMKN-SRDGKSYS---TNLAFTPPEYLRTGRVTPESV-IYSF 241
+L + DG +L+ FGL + +SY+ L + P+ L + SV I+S
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G + ++++GK + P TDDD +L ++ S PR
Sbjct: 207 GCIFAEMITGKPLFPG----------------------VTDDD--QLPKIFSILGTPNPR 242
Query: 302 ERPNPKSLVTALSPLQKETEFSI 324
E P + L PL K+ F +
Sbjct: 243 EWPQVQEL-----PLWKQRTFQV 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 66 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 125
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK-WAMRLRVVLHLAQAL----EYCTS 176
+G + R ++ E M L L P + ++ + +LH+A+ + +Y
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 184
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---------GKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ G +RD G + + PPE
Sbjct: 185 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 244
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 245 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 300
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 301 -VYRIMTQCWQHQPEDRPN 318
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 24/259 (9%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 137 YMPNETLAKHLFHWETHPMKWA----MRLRVVLH----LAQALEYCTSKGRALYHDLNAY 188
Y L L + + LR +LH +AQ + + SK ++ D+ A
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 189
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFG 242
+L ++ FGL ++ + +Y + + PE + T +S ++S+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 243 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEP 300
LL ++ S P + L+ + +++ D Q F + + + C EP
Sbjct: 250 ILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACWALEP 304
Query: 301 RERPNPKSLVTALSPLQKE 319
RP + + + L +E
Sbjct: 305 THRPTFQQICSFLQEQAQE 323
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 39/263 (14%)
Query: 69 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCC 126
GE VVYK K R +A+KR A + P + E + +L + + +L+
Sbjct: 30 GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH 89
Query: 127 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 186
LV E+M + L K L +T +++ + L + + +C + R L+ DL
Sbjct: 90 SERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKI-YLYQLLRGVAHC-HQHRILHRDLK 146
Query: 187 AYRILFDEDGNPRLSTFGLMKN-SRDGKSYS---TNLAFTPPEYLRTGRVTPESV-IYSF 241
+L + DG +L+ FGL + +SY+ L + P+ L + SV I+S
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSI 206
Query: 242 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 301
G + ++++GK + P TDDD +L ++ S PR
Sbjct: 207 GCIFAEMITGKPLFPG----------------------VTDDD--QLPKIFSILGTPNPR 242
Query: 302 ERPNPKSLVTALSPLQKETEFSI 324
E P + L PL K+ F +
Sbjct: 243 EWPQVQEL-----PLWKQRTFQV 260
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 12/189 (6%)
Query: 85 RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 144
+++AVK+ + E + ++ + ++ GDE +V E++ L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 204
+ H + + A V L + +AL Y ++G ++ D+ + IL DG +LS FG
Sbjct: 131 DIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 205 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPP 256
L TP PE + E I+S G ++++++ G+ + PP
Sbjct: 187 FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
Query: 257 SHALDLIRD 265
A+ IRD
Sbjct: 247 LQAMRRIRD 255
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G + ++V EYM N +L L +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQL 126
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN 218
+ ++ ++ ++Y + G ++ DL A IL + + ++S FGL + D +Y+T
Sbjct: 127 VGMLRGISAGMKYLSDMGY-VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
Query: 219 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
+ +T PE + + T S ++S+G ++ +++S
Sbjct: 186 GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 28/263 (10%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 137 YMPNETLAKHLFH----WETHP----MKWAMRLRVVLH----LAQALEYCTSKGRALYHD 184
Y L L ET P R +LH +AQ + + SK ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRD 189
Query: 185 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVI 238
+ A +L ++ FGL ++ + +Y + + PE + T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 239 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCL 296
+S+G LL ++ S P + L+ + +++ D Q F + + + C
Sbjct: 250 WSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQACW 304
Query: 297 QYEPRERPNPKSLVTALSPLQKE 319
EP RP + + + L +E
Sbjct: 305 ALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 20/228 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH--WETHPMKWAM 159
+FL E + +LR+ + +G + +V EY+ +L + L H +
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERR 138
Query: 160 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 218
RL + +A+ + Y ++ + H DL + +L D+ ++ FGL + S
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 219 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM 270
A TP PE LR +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
C + + ++ + C EP +RP+ +++ L PL K
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 69 GEKAPNVVYKGKLENQR------RIAVKRFNRM-AWPDPRQFLEEARSVGQLRNNRLTNL 121
G A VY+G++ ++AVK + + D FL EA + + + +
Sbjct: 40 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 99
Query: 122 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMR--LRVVLHLAQALEYCTS 176
+G + R ++ E M L L + P AM L V +A +Y
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 177 KGRALYHDLNAYRILFDEDGNPRLST---FGLMKN------SRDGKSYSTNLAFTPPEYL 227
+ ++ D+ A L G R++ FG+ ++ R G + + PPE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 228 RTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 286
G T ++ +SFG LL ++ S ++P PS + L+ +T + G
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS----NQEVLEFVTSGGRMDPPKNCPGP 274
Query: 287 ELVRLASRCLQYEPRERPN 305
+ R+ ++C Q++P +RPN
Sbjct: 275 -VYRIMTQCWQHQPEDRPN 292
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q + +T G + + ++ EY+ + L E P+ ++
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 130
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + TP
Sbjct: 131 REILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCL 276
PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTL 244
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
EG ++ L CL EP RP K L+
Sbjct: 245 EGNYSK----PLKEFVEACLNKEPSFRPTAKELL 274
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 26/193 (13%)
Query: 71 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 130
KA VY KL + +F + D F EE R + N+ L C + D+
Sbjct: 97 KASQKVYAMKL-------LSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLFCAFQDDK 148
Query: 131 RL-LVAEYMPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNA 187
L +V EYMP L + +++ P KWA VVL AL+ S G ++ D+
Sbjct: 149 YLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVL----ALDAIHSMG-LIHRDVKP 202
Query: 188 YRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVI 238
+L D+ G+ +L+ FG MK G + TP PE L++ G E
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 239 YSFGTLLLDLLSG 251
+S G L ++L G
Sbjct: 263 WSVGVFLFEMLVG 275
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 46/285 (16%)
Query: 67 EHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 120
E GE A V+ + N + +AVK + + F EA + L++ +
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 121 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETH----------------PMKWAMRLRVV 164
G C EG L+V EYM + L + L +H P+ L V
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A + Y ++ DL L + ++ FG+ ++ Y
Sbjct: 142 SQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTD 273
+ + PPE + + T ES ++SFG +L ++ + GK + + A+D I
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR 260
Query: 274 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
+C E+ + C Q EP++R + K + L L +
Sbjct: 261 AC---------PPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 101/264 (38%), Gaps = 40/264 (15%)
Query: 82 ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++ +AVK + + F EA + L++ + G C EG L+V EYM +
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 142 TLAKHLFHWETH----------------PMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
L + L +H P+ L V +A + Y ++ DL
Sbjct: 129 DLNRFL---RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDL 184
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIY 239
L + ++ FG+ ++ Y + + PPE + + T ES ++
Sbjct: 185 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 244
Query: 240 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294
SFG +L ++ + GK + + A+D I +C E+ +
Sbjct: 245 SFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRG 295
Query: 295 CLQYEPRERPNPKSLVTALSPLQK 318
C Q EP++R + K + L L +
Sbjct: 296 CWQREPQQRHSIKDVHARLQALAQ 319
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 101/264 (38%), Gaps = 40/264 (15%)
Query: 82 ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++ +AVK + + F EA + L++ + G C EG L+V EYM +
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 142 TLAKHLFHWETH----------------PMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 185
L + L +H P+ L V +A + Y ++ DL
Sbjct: 100 DLNRFL---RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDL 155
Query: 186 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIY 239
L + ++ FG+ ++ Y + + PPE + + T ES ++
Sbjct: 156 ATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVW 215
Query: 240 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 294
SFG +L ++ + GK + + A+D I +C E+ +
Sbjct: 216 SFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC---------PPEVYAIMRG 266
Query: 295 CLQYEPRERPNPKSLVTALSPLQK 318
C Q EP++R + K + L L +
Sbjct: 267 CWQREPQQRHSIKDVHARLQALAQ 290
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q + +T G + + ++ EY+ + L E P+ ++
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 110
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + TP
Sbjct: 111 REILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCL 276
PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTL 224
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
EG ++ L CL EP RP K L+
Sbjct: 225 EGNYSK----PLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 41/304 (13%)
Query: 40 GLPSFRE-FTLEQLKNATSGFA---------VENI--VSEHGEKAPNVVYKGKLE--NQR 85
G+ +F + FT E A FA +E + V E GE V G+L+ +R
Sbjct: 2 GVRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGE-----VCSGRLKVPGKR 56
Query: 86 RIAVK-RFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
I V + + + D R FL EA +GQ + + +L G + +++ EYM N +
Sbjct: 57 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 202
L L + + ++ + ++Y S A++ DL A IL + + ++S
Sbjct: 117 LDAFLRKNDGR-FTVIQLVGMLRGIGSGMKYL-SDMSAVHRDLAARNILVNSNLVCKVSD 174
Query: 203 FGLMKNSRDG--KSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
FG+ + D +Y+T + +T PE + + T S ++S+G ++ +++S P
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 256 PSHALDLIRDRNLQMLTDSCLEGQFTD---DDGTELVRLASRCLQYEPRERPNPKSLVTA 312
D + Q + + EG D L +L C Q E +RP +V
Sbjct: 235 -------YWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNM 287
Query: 313 LSPL 316
L L
Sbjct: 288 LDKL 291
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q + +T G + + ++ EY+ + L E P+ ++
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 125
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + TP
Sbjct: 126 REILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCL 276
PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTL 239
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
EG ++ L CL EP RP K L+
Sbjct: 240 EGNYS----KPLKEFVEACLNKEPSFRPTAKELL 269
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 54 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 111
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 112 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 226
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 227 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 117
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 118 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 232
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 233 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 21/214 (9%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
+E + Q + +T G + + ++ EY+ + L E P+ ++
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATIL 110
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ + L+Y S+ + ++ D+ A +L E G +L+ FG+ D + TP
Sbjct: 111 REILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCL 276
PE ++ ++ I+S G ++L G+ + P L LI N L
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTL 224
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
EG ++ L CL EP RP K L+
Sbjct: 225 EGNYS----KPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 137 YMPNETLAKHL----------FHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRALY 182
Y L L + +H + + R +LH +AQ + + SK ++
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK-NCIH 189
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPES 236
D+ A +L ++ FGL ++ + +Y + + PE + T +S
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASR 294
++S+G LL ++ S P + L+ + +++ D Q F + + +
Sbjct: 250 DVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN---IYSIMQA 304
Query: 295 CLQYEPRERPNPKSLVTALSPLQKE 319
C EP RP + + + L +E
Sbjct: 305 CWALEPTHRPTFQQICSFLQEQAQE 329
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 116
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 117 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 231
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 232 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 274
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 119
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 120 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 234
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 235 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + + A +
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKYSLDLASLI 142
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 143 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 257
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 258 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 300
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKLENQRR-----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLL 122
G A VYKG + +A+K N P +F++EA + + + L LL
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + LV + MP+ L +++ H + + L + +A+ + Y + R ++
Sbjct: 84 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYL-----RTGRVTPES 236
DL A +L + +++ FGL + D K Y+ + P +++ + T +S
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTIWELMT 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G + +++ E+M N +L L +
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 137
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YST 217
+ ++ +A ++Y ++ DL A IL + + ++S FGL + D S Y++
Sbjct: 138 VGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 196
Query: 218 NLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
L +T PE ++ + T S ++S+G ++ +++S
Sbjct: 197 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKLENQRR-----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLL 122
G A VYKG + +A+K N P +F++EA + + + L LL
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + LV + MP+ L +++ H + + L + +A+ + Y + R ++
Sbjct: 107 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 163
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEY-----LRTGRVTPES 236
DL A +L + +++ FGL + D K Y+ + P ++ + + T +S
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 223
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 224 DVWSYGVTIWELMT 237
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLR 162
+ E R + RN+ L CC + +RL V E++ L +FH + R R
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 127
Query: 163 V-VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKSYST 217
+ AL + KG +Y DL +L D +G+ +L+ FG+ K N ++
Sbjct: 128 FYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG 186
Query: 218 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
+ PE L+ P ++ G LL ++L G H P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG-HAP 223
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 20/228 (8%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH--WETHPMKWAM 159
+FL E + +LR+ + +G + +V EY+ +L + L H +
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERR 138
Query: 160 RLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 218
RL + +A+ + Y ++ + H +L + +L D+ ++ FGL + S +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 219 LAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM 270
A TP PE LR +S +YSFG +L +L + + ++ P+ + + +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---- 254
Query: 271 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 318
C + + ++ + C EP +RP+ +++ L PL K
Sbjct: 255 ----CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 85 RRIAVKRFNR--MAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++A+K N+ +A D + +E E + LR+ + L DE ++V EY NE
Sbjct: 40 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 99
Query: 142 TLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
LF + + M R + A+EYC + + ++ DL +L DE N +
Sbjct: 100 -----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVK 153
Query: 200 LSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 249
++ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 154 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 37/272 (13%)
Query: 79 GKLENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 136
GK + ++AVK A D ++ + E + + L ++ + NLLG C G L++ E
Sbjct: 56 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 137 Y----------------MPNETLA-----KHLFHWETHPMKWAMRLRVVLHLAQALEYCT 175
Y M +LA + L + P++ L +AQ + +
Sbjct: 116 YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA 175
Query: 176 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRT 229
SK ++ D+ A +L ++ FGL ++ + +Y + + PE +
Sbjct: 176 SK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 230 GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTE 287
T +S ++S+G LL ++ S P + L+ + +++ D Q F +
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNP--YPGILVNSKFYKLVKDGYQMAQPAFAPKN--- 289
Query: 288 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ + C EP RP + + + L +E
Sbjct: 290 IYSIMQACWALEPTHRPTFQQICSFLQEQAQE 321
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 113/296 (38%), Gaps = 42/296 (14%)
Query: 50 EQLKNATSGFAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRF-NRMAWPDPRQ 102
+Q K + + E GE VYKG L E + +A+K ++ P +
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE 75
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP-------- 154
F EA +L++ + LLG + ++ Y + L + L H
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 155 --MKWAMR----LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 208
+K A+ + +V +A +EY +S ++ DL +L + N ++S GL +
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 209 SRDGKSYST------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PS 257
Y + + PE + G+ + +S I+S+G +L ++ S P
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 258 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
+++IR+R + D C + L C P RP K + + L
Sbjct: 255 DVVEMIRNRQVLPCPDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 85 RRIAVKRFNR--MAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++A+K N+ +A D + +E E + LR+ + L DE ++V EY NE
Sbjct: 39 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 98
Query: 142 TLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
LF + + M R + A+EYC + + ++ DL +L DE N +
Sbjct: 99 -----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVK 152
Query: 200 LSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 249
++ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 85 RRIAVKRFNR--MAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++A+K N+ +A D + +E E + LR+ + L DE ++V EY NE
Sbjct: 30 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 89
Query: 142 TLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
LF + K + + R + A+EYC + + ++ DL +L DE N +
Sbjct: 90 -----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVK 143
Query: 200 LSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 249
++ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 144 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 80 KLENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVA-- 135
K R +AVK A + R + E + + + ++ + NLLG C + L+V
Sbjct: 53 KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 112
Query: 136 ----------------EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
E++P + L K E H + ++ ++ A+ +E+ S+ +
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE-HLIXYSFQV------AKGMEFLASR-K 164
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVT 233
++ DL A IL E ++ FGL ++ Y L + PE + T
Sbjct: 165 XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 234 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
+S ++SFG LL ++ S G P +D R L+ T + D E+ +
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT----RMRAPDYTTPEMYQTM 280
Query: 293 SRCLQYEPRERPNPKSLVTALSPL 316
C EP +RP LV L L
Sbjct: 281 LDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 17/175 (9%)
Query: 85 RRIAVKRFNR--MAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
+++A+K N+ +A D + +E E + LR+ + L DE ++V EY NE
Sbjct: 34 QKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 93
Query: 142 TLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
LF + K + + R + A+EYC + + ++ DL +L DE N +
Sbjct: 94 -----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVK 147
Query: 200 LSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLL 249
++ FGL DG T+ + PE + +G++ PE ++S G +L +L
Sbjct: 148 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH-PMKWAM 159
++F E + QL + + +++ E D LV EY+ TL++++ E+H P+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDT 112
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 219
+ + +++ R ++ D+ IL D + ++ FG+ K + TN
Sbjct: 113 AINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH 171
Query: 220 AFTPPEYLR----TGRVTPE-SVIYSFGTLLLDLLSGKHIPP 256
+Y G T E + IYS G +L ++L G+ PP
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 109/282 (38%), Gaps = 42/282 (14%)
Query: 64 IVSEHGEKAPNVVYKGKL------ENQRRIAVKRF-NRMAWPDPRQFLEEARSVGQLRNN 116
+ E GE VYKG L E + +A+K ++ P +F EA +L++
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 117 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP----------MKWAMR----LR 162
+ LLG + ++ Y + L + L H +K A+ +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----- 217
+V +A +EY +S ++ DL +L + N ++S GL + Y
Sbjct: 133 LVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 218 -NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQML 271
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC 251
Query: 272 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 313
D C + L C P RP K + + L
Sbjct: 252 PDDCPAWVYA---------LMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTA 115
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTNL 219
+ LA AL YC SK R ++ D+ +L +G +++ FG ++ + + L
Sbjct: 116 TYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTL 174
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHA 259
+ PPE + GR+ E V ++S G L + L G +PP A
Sbjct: 175 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
Q E LR+ + L G + L+ EY P T+ + L +
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTA 115
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNL 219
+ LA AL YC SK R ++ D+ +L +G +++ FG ++ + + L
Sbjct: 116 TYITELANALSYCHSK-RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTL 174
Query: 220 AFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHA 259
+ PPE + GR+ E V ++S G L + L G +PP A
Sbjct: 175 DYLPPEMIE-GRMHDEKVDLWSLGVLCYEFLVG--MPPFEA 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 88/223 (39%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLI 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L +L FGL + D Y +
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + A +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLI 494
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L + +L FGL + D Y +
Sbjct: 495 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 609
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEY 173
LT L C D V EY+ L H+ E H + +A + + L Q
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---- 138
Query: 174 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRT 229
SKG +Y DL ++ D +G+ +++ FG+ K N DG K + + PE +
Sbjct: 139 --SKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 230 GRVTPESVIYSFGTLLLDLLSGK 252
++FG LL ++L+G+
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEY 173
LT L C D V EY+ L H+ E H + +A + + L Q
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---- 459
Query: 174 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRT 229
SKG +Y DL ++ D +G+ +++ FG+ K N DG K + + PE +
Sbjct: 460 --SKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 230 GRVTPESVIYSFGTLLLDLLSGK 252
++FG LL ++L+G+
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 81 LENQRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLL 133
L + R +AVK DP +F EA++ L + + + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V EY+ TL + + H E PM + V+ QAL + G ++ D+ I+
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMIS 150
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLL 246
++ FG+ + D + T A + PE R V S +YS G +L
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 247 DLLSGKHIPP 256
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 6/178 (3%)
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
D LV M L H++H A + + LE + R +Y DL
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED-LHRERIVYRDLKPE 315
Query: 189 RILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 245
IL D+ G+ R+S GL + +G K + + PE ++ R T ++ G LL
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLL 375
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++++G+ P I+ ++ L E ++++ + L S+ L +P ER
Sbjct: 376 YEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 19/226 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G + +++ EYM N +L L +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 118
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN 218
+ ++ + ++Y + ++ DL A IL + + ++S FG+ + D +Y+T
Sbjct: 119 VGMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 219 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
+ +T PE + + T S ++S+G ++ +++S P D + Q +
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIK 230
Query: 274 SCLEGQFTD---DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ EG D L +L C Q E +RP +V L L
Sbjct: 231 AIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 81 LENQRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLL 133
L + R +AVK DP +F EA++ L + + + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V EY+ TL + + H E PM + V+ QAL + G ++ D+ I+
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMIS 150
Query: 194 EDGNPRLSTFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLL 246
++ FG+ + D + T A + PE R V S +YS G +L
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 247 DLLSGKHIPP 256
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS--TNLAFT 222
LA L++ S G +Y DL IL DE+G+ +L+ FGL K + D K+YS + +
Sbjct: 139 LALGLDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYM 197
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 251
PE + + + +S+G L+ ++L+G
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 19/226 (8%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G + +++ EYM N +L L +
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 112
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN 218
+ ++ + ++Y + ++ DL A IL + + ++S FG+ + D +Y+T
Sbjct: 113 VGMLRGIGSGMKYLSDMS-YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 219 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 273
+ +T PE + + T S ++S+G ++ +++S P D + Q +
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDVIK 224
Query: 274 SCLEGQFTD---DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ EG D L +L C Q E +RP +V L L
Sbjct: 225 AIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 30/149 (20%)
Query: 76 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR--SVGQLRNNRLTNLLGCCCEGDER-- 131
VYKG L ++R +AVK F ++ + + F+ E V + ++ + + GDER
Sbjct: 29 VYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFI----VGDERVT 80
Query: 132 -------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-------- 176
LLV EY PN +L K+L H W R+ + + L Y +
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL 205
K + DLN+ +L DG +S FGL
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGL 166
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 6/178 (3%)
Query: 129 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
D LV M L H++H A + + LE + R +Y DL
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLED-LHRERIVYRDLKPE 315
Query: 189 RILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 245
IL D+ G+ R+S GL + +G K + + PE ++ R T ++ G LL
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLL 375
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
++++G+ P I+ ++ L E ++++ + L S+ L +P ER
Sbjct: 376 YEMIAGQS-PFQQRKKKIKREEVERLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 81 LENQRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLL 133
L + R +AVK DP +F EA++ L + + + G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 134 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 193
V EY+ TL + + H E PM + V+ QAL + G ++ D+ IL
Sbjct: 94 VMEYVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANILIS 150
Query: 194 EDGNPRLSTFGLMKNSRD-GKSYSTNLA------FTPPEYLRTGRVTPESVIYSFGTLLL 246
++ FG+ + D G S A + PE R V S +YS G +L
Sbjct: 151 ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 247 DLLSGKHIPP 256
++L+G+ PP
Sbjct: 211 EVLTGE--PP 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 28/231 (12%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + A +
Sbjct: 437 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLI 494
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--- 218
L+ AL Y SK R ++ D+ A +L +L FGL + D Y +
Sbjct: 495 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 219 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ + PE + R T S ++ FG + ++L H + + Q + ++ +
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-------HGV-----KPFQGVKNNDV 601
Query: 277 EGQFTDDDGT--------ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
G+ + + L L ++C Y+P RP L LS + +E
Sbjct: 602 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 39/264 (14%)
Query: 80 KLENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVA-- 135
K R +AVK A + R + E + + + ++ + NLLG C + L+V
Sbjct: 53 KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 112
Query: 136 ----------------EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 179
E++P + L K E H + ++ ++ A+ +E+ S+ +
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE-HLICYSFQV------AKGMEFLASR-K 164
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVT 233
++ DL A IL E ++ FGL ++ Y L + PE + T
Sbjct: 165 XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 224
Query: 234 PESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
+S ++SFG LL ++ S G P +D R L+ T + D E+ +
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTM 280
Query: 293 SRCLQYEPRERPNPKSLVTALSPL 316
C EP +RP LV L L
Sbjct: 281 LDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R FL EA +GQ + + +L G + +++ E+M N +L L +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 111
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YST 217
+ ++ +A ++Y ++ L A IL + + ++S FGL + D S Y++
Sbjct: 112 VGMLRGIAAGMKYLADM-NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS 170
Query: 218 NLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
L +T PE ++ + T S ++S+G ++ +++S
Sbjct: 171 ALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 213
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ Y L + PE + T +S ++SF
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 274 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 329
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 330 SQRPTFSELVEHLGNL 345
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAM 159
R FL+E + + L + + +G + D+RL + EY+ TL + ++ W+
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQ 109
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-------------- 205
R+ +A + Y S ++ DLN++ L E+ N ++ FGL
Sbjct: 110 RVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 206 --MKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHAL 260
+K K Y+ N + PE + GR E V ++SFG +L +++ + P +
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMI-NGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-- 225
Query: 261 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
L R + + L+ + + RC +P +RP+
Sbjct: 226 -LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPS 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 176
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ Y L + PE + T +S ++SF
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 292
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 293 SQRPTFSELVEHLGNL 308
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 12/223 (5%)
Query: 102 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 161
+FL+EA ++ Q + + L+G E +++ E + + A +
Sbjct: 57 KFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLI 114
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 218
L+ AL Y SK R ++ D+ A +L + +L FGL M++S K+
Sbjct: 115 LYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 219 L--AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
L + PE + R T S ++ FG + ++L P +++ ++ ++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP----FQGVKNNDVIGRIENGE 229
Query: 277 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 319
+ L L ++C Y+P RP L LS + +E
Sbjct: 230 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 272
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 167
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ Y L + PE + T +S ++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 284 SQRPTFSELVEHLGNL 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 167
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ Y L + PE + T +S ++SF
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 283
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 284 SQRPTFSELVEHLGNL 299
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 166 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-- 223
+ A++YC K R ++ DL A +L D D N +++ FG G T P
Sbjct: 119 QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 224 -PEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 228
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 19/187 (10%)
Query: 84 QRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLLVAE 136
R +AVK DP +F EA++ L + + + G +V E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVME 96
Query: 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196
Y+ TL + + H E PM + V+ QAL + G ++ D+ I+
Sbjct: 97 YVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATN 153
Query: 197 NPRLSTFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
++ FG+ + D + T A + PE R V S +YS G +L ++L
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 250 SGKHIPP 256
+G+ PP
Sbjct: 214 TGE--PP 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 30/254 (11%)
Query: 88 AVKRFNRMAWPDP-RQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLAK 145
A+KR A D R F E + +L ++ + NLLG C L EY P+ L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 146 HLFH---WETHP-----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
L ET P + L +A+ ++Y + K + ++ DL A IL
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNIL 174
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLL 245
E+ +++ FGL SR + Y P E L T S ++S+G LL
Sbjct: 175 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+++S P + + ++ LE DD E+ L +C + +P ERP+
Sbjct: 232 WEIVSLGGTP--YCGMTCAELYEKLPQGYRLEKPLNCDD--EVYDLMRQCWREKPYERPS 287
Query: 306 PKSLVTALSPLQKE 319
++ +L+ + +E
Sbjct: 288 FAQILVSLNRMLEE 301
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 30/254 (11%)
Query: 88 AVKRFNRMAWPDP-RQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLAK 145
A+KR A D R F E + +L ++ + NLLG C L EY P+ L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 146 HLFH---WETHP-----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
L ET P + L +A+ ++Y + K + ++ DL A IL
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNIL 164
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLL 245
E+ +++ FGL SR + Y P E L T S ++S+G LL
Sbjct: 165 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+++S P + + ++ LE DD E+ L +C + +P ERP+
Sbjct: 222 WEIVSLGGTP--YCGMTCAELYEKLPQGYRLEKPLNCDD--EVYDLMRQCWREKPYERPS 277
Query: 306 PKSLVTALSPLQKE 319
++ +L+ + +E
Sbjct: 278 FAQILVSLNRMLEE 291
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 29/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 178
Query: 188 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ Y L + PE + T +S ++SF
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 239 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 294
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 295 SQRPTFSELVEHLGNL 310
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 88 AVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL 147
AVK ++ + DP + +E GQ N + L +G LV E M L +
Sbjct: 56 AVKVIDK-SKRDPSEEIEILLRYGQHPN--IITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 148 FHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLST 202
+ + A VLH + + +EY S+G ++ DL IL+ DE GNP R+
Sbjct: 113 LRQKFFSEREA---SFVLHTIGKTVEYLHSQG-VVHRDLKPSNILYVDESGNPECLRICD 168
Query: 203 FGLMKNSRDGKS------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 256
FG K R Y+ N F PE L+ I+S G LL +L+G + P
Sbjct: 169 FGFAKQLRAENGLLMTPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-YTPF 225
Query: 257 SHALDLIRDRNLQMLTDSCLEGQFTDDDG-----TELVR-LASRCLQYEPRERPNPKSLV 310
++ D ++LT G+FT G +E + L S+ L +P +R K ++
Sbjct: 226 ANGPS---DTPEEILT-RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 99 DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWA 158
DP + +E GQ N + L +G LV E M L + + + A
Sbjct: 66 DPSEEIEILLRYGQHPN--IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 159 MRLRVVLH-LAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLSTFGLMKNSRDGK 213
VLH + + +EY S+G ++ DL IL+ DE GNP R+ FG K R
Sbjct: 124 ---SFVLHTIGKTVEYLHSQG-VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
Query: 214 S------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 267
Y+ N F PE L+ I+S G LL +L+G + P ++ D
Sbjct: 180 GLLMTPCYTAN--FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG-YTPFANGPS---DTP 233
Query: 268 LQMLTDSCLEGQFTDDDG-----TELVR-LASRCLQYEPRERPNPKSLV 310
++LT G+FT G +E + L S+ L +P +R K ++
Sbjct: 234 EEILT-RIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R+FL EA +GQ + + L G +++ E+M N L L R
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL------------R 107
Query: 161 LR----VVLHLAQALEYCTSKGRAL------YHDLNAYRILFDEDGNPRLSTFGLMK--- 207
L V+ L L S R L + DL A IL + + ++S FGL +
Sbjct: 108 LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 167
Query: 208 -NSRDGKSYSTNLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
NS D +Y+++L +T PE + + T S +S+G ++ +++S
Sbjct: 168 ENSSD-PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 32/272 (11%)
Query: 69 GEKAPNVVYKGKLENQR----RIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
GE V +G L+ + ++AVK + + + + +FL EA + + + LL
Sbjct: 43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 123 GCCCEGDER-----LLVAEYMPNETLAKHLFH--WETHPMKWAMR--LRVVLHLAQALEY 173
G C E + +++ +M L +L + ET P ++ L+ ++ +A +EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 174 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-LAFTPPEYLR---- 228
+++ L+ DL A + +D ++ FGL K G Y +A P +++
Sbjct: 163 LSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 229 TGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDD 284
RV T +S +++FG + ++ + P +N +M D L G + +D
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV------QNHEMY-DYLLHGHRLKQPEDC 274
Query: 285 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
EL + C + +P +RP L L L
Sbjct: 275 LDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERL-LVAEYMPNETLA 144
+AVK+ R F E + + L ++ + G G + L LV EY+P+ L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
L + H + R++L+ +Q +EY S+ R ++ DL A IL + + + +++
Sbjct: 102 DFL---QRHRARLDAS-RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIA 156
Query: 202 TFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
FGL K K Y + + + PE L + +S ++SFG +L +L +
Sbjct: 157 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERL-LVAEYMPNETLA 144
+AVK+ R F E + + L ++ + G G + L LV EY+P+ L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
L + H + R++L+ +Q +EY S+ R ++ DL A IL + + + +++
Sbjct: 115 DFL---QRHRARLDAS-RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIA 169
Query: 202 TFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
FGL K K Y + + + PE L + +S ++SFG +L +L +
Sbjct: 170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 69 GEKAPNVVYKGKLENQRRI-AVKRF-----NRMAWPDPRQFLEEARSVGQLRNNRLTNLL 122
GE + +V K + ++ RI A+K+F ++M + + E + + QLR+ L NLL
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV---KKIAMREIKLLKQLRHENLVNLL 90
Query: 123 GCCCEGDERLLVAEYMPNETLAK-HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 181
C + LV E++ + L LF + + + + + + + + +C S +
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN-II 146
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLA---FTPPEYLRTGRVTPESV 237
+ D+ IL + G +L FG + + G+ Y +A + PE L ++V
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 238 -IYSFGTLLLDLLSGKHIPPS 257
+++ G L+ ++ G+ + P
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPG 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERL-LVAEYMPNETLA 144
+AVK+ R F E + + L ++ + G G + L LV EY+P+ L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
L + H + R++L+ +Q +EY S+ R ++ DL A IL + + + +++
Sbjct: 103 DFL---QRHRARLDAS-RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIA 157
Query: 202 TFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
FGL K K Y + + + PE L + +S ++SFG +L +L +
Sbjct: 158 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 19/187 (10%)
Query: 84 QRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLLVAE 136
R +AVK DP +F EA++ L + + + G +V E
Sbjct: 37 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96
Query: 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196
Y+ TL + + H E PM + V+ QAL + G ++ D+ I+
Sbjct: 97 YVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATN 153
Query: 197 NPRLSTFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
++ FG+ + D + T A + PE R V S +YS G +L ++L
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 250 SGKHIPP 256
+G+ PP
Sbjct: 214 TGE--PP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 19/187 (10%)
Query: 84 QRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGC----CCEGDERLLVAE 136
R +AVK DP +F EA++ L + + + G +V E
Sbjct: 54 HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 113
Query: 137 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196
Y+ TL + + H E PM + V+ QAL + G ++ D+ I+
Sbjct: 114 YVDGVTL-RDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATN 170
Query: 197 NPRLSTFGLMKNSRDGKSYSTNLA-------FTPPEYLRTGRVTPESVIYSFGTLLLDLL 249
++ FG+ + D + T A + PE R V S +YS G +L ++L
Sbjct: 171 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 230
Query: 250 SGKHIPP 256
+G+ PP
Sbjct: 231 TGE--PP 235
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 112 QLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 170
Q N+ L C + + RL V EY+ L H+ P + A + LA
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-- 165
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA---FTPPEY 226
L Y +G +Y DL +L D +G+ +L+ +G+ K R G + ST + PE
Sbjct: 166 LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI 224
Query: 227 LRTGRVTPESVIYSFGTLLLDLLSGK 252
LR ++ G L+ ++++G+
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ +S+ + ++ DL A IL E+ ++ FGL ++ Y
Sbjct: 206 FQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSC- 275
L + PE + + +S ++S+G LL ++ S G P +QM D C
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP-----------GVQMDEDFCS 313
Query: 276 -----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ + + E+ ++ C +P+ERP LV L L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 166 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFT 222
+ A++YC K R ++ DL A +L D D N +++ FG G ++ +
Sbjct: 122 QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 223 PPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 200 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 314
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ D E+ + C EP +RP LV L L
Sbjct: 315 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 198 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 312
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ D E+ + C EP +RP LV L L
Sbjct: 313 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 167
Query: 188 YRILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
IL E ++ FGL ++ R G + L + PE + T +S ++S
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 241 FGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
FG LL ++ S G P +D R L+ T + D E+ + C E
Sbjct: 227 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGE 282
Query: 300 PRERPNPKSLVTALSPL 316
P +RP LV L L
Sbjct: 283 PSQRPTFSELVEHLGNL 299
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 176
Query: 188 YRILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
IL E ++ FGL ++ R G + L + PE + T +S ++S
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 241 FGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
FG LL ++ S G P +D R L+ T + D E+ + C E
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGE 291
Query: 300 PRERPNPKSLVTALSPL 316
P +RP LV L L
Sbjct: 292 PSQRPTFSELVEHLGNL 308
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 118 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 176
Query: 188 YRILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
IL E ++ FGL ++ R G + L + PE + T +S ++S
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 241 FGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
FG LL ++ S G P +D R L+ T + D E+ + C E
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGE 291
Query: 300 PRERPNPKSLVTALSPL 316
P +RP LV L L
Sbjct: 292 PSQRPTFSELVEHLGNL 308
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 82 ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL---RNNRLTNLLGCCCEGDERLLVAEYM 138
+ Q+++A+K +R + R + L R+ + L + ++V EY
Sbjct: 32 KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA 91
Query: 139 PNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 196
E LF + E M R + A+EYC + + ++ DL +L D++
Sbjct: 92 GGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIEYC-HRHKIVHRDLKPENLLLDDNL 145
Query: 197 NPRLSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG 251
N +++ FGL DG T+ + PE + G++ PE ++S G +L +L G
Sbjct: 146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVG 204
Query: 252 K 252
+
Sbjct: 205 R 205
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 205 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 319
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ D E+ + C EP +RP LV L L
Sbjct: 320 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 218
+A+ +E+ S+ + ++ DL A IL E ++ FGL ++ Y
Sbjct: 207 FQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 219 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 277
L + PE + T +S ++SFG LL ++ S G P +D R L+ T
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----R 321
Query: 278 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 316
+ D E+ + C EP +RP LV L L
Sbjct: 322 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWA--M 159
F E R + N+ L + D L +V EYMP L + +++ P KWA
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFY 173
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN 218
VVL AL+ S G ++ D+ +L D+ G+ +L+ FG MK +++G
Sbjct: 174 TAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 219 LAFTP----PEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
TP PE L++ G E +S G L ++L G P +A L+
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYADSLV 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWA--M 159
F E R + N+ L + D L +V EYMP L + +++ P KWA
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFY 178
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN 218
VVL AL+ S G ++ D+ +L D+ G+ +L+ FG MK +++G
Sbjct: 179 TAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 219 LAFTP----PEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
TP PE L++ G E +S G L ++L G P +A L+
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYADSLV 284
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 21/204 (10%)
Query: 85 RRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
R +AVK ++ +P ++ E R + L + + L LV EY
Sbjct: 41 REVAVKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 142 TLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200
+ +L H + + R + A++YC K ++ DL A +L D D N ++
Sbjct: 100 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-YIVHRDLKAENLLLDGDMNIKI 155
Query: 201 STFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPP 256
+ FG G T P PE + + PE ++S G +L L+SG
Sbjct: 156 ADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG----- 210
Query: 257 SHALDLIRDRNLQMLTDSCLEGQF 280
S D +NL+ L + L G++
Sbjct: 211 SLPFD---GQNLKELRERVLRGKY 231
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 31/257 (12%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 142 TLAKHL-------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNA 187
L+ +L ++ P + HL A+ +E+ S+ + ++ DL A
Sbjct: 109 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAA 167
Query: 188 YRILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYS 240
IL E ++ FGL ++ R G + L + PE + T +S ++S
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWS 226
Query: 241 FGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 299
FG LL ++ S G P +D R L+ T + D E+ + C E
Sbjct: 227 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGE 282
Query: 300 PRERPNPKSLVTALSPL 316
P +RP LV L L
Sbjct: 283 PSQRPTFSELVEHLGNL 299
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 103 FLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWA--M 159
F E R + N+ L + D L +V EYMP L + +++ P KWA
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKWARFY 178
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN 218
VVL AL+ S G ++ D+ +L D+ G+ +L+ FG MK +++G
Sbjct: 179 TAEVVL----ALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 219 LAFTP----PEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
TP PE L++ G E +S G L ++L G P +A L+
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD--TPFYADSLV 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNP---RLSTFGLMKNSRDGKS---- 214
V+ + + +EY ++G ++ DL IL+ DE GNP R+ FG K R
Sbjct: 121 VLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 215 --YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
Y+ N F PE L I+S G LL +L+G + P ++ D + L +
Sbjct: 180 PCYTAN--FVAPEVLERQGYDAACDIWSLGVLLYTMLTG-YTPFANGPDDTPEEILARIG 236
Query: 273 DS--CLEGQFTDDDGTELVRLASRCLQYEPRER 303
L G + + L S+ L +P +R
Sbjct: 237 SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 85 RRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
++AVK NR + + E +++ R+ + L + +V EY+
Sbjct: 37 HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96
Query: 142 TLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200
L ++ H M+ R+ + A++YC + ++ DL +L D N ++
Sbjct: 97 ELFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKI 152
Query: 201 STFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG---- 251
+ FGL DG+ T+ + PE + +GR+ PE I+S G +L LL G
Sbjct: 153 ADFGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 252 --KHIP 255
+H+P
Sbjct: 212 DDEHVP 217
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 222
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 316
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 370
Query: 283 DDGTELVRLASRCLQYEPRER 303
G E L S L+ +P++R
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 222
+ AL+Y S+ +Y DL ++ D+DG+ +++ FGL K +DG K++ +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 282
PE L + G ++ +++ G+ P + D + L ++ E +F
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLFELILME----EIRFPR 373
Query: 283 DDGTELVRLASRCLQYEPRER 303
G E L S L+ +P++R
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQR 394
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 30/254 (11%)
Query: 88 AVKRFNRMAWPDP-RQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLAK 145
A+KR A D R F E + +L ++ + NLLG C L EY P+ L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 146 HLFH---WETHP-----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
L ET P + L +A+ ++Y + K + ++ +L A IL
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRNLAARNIL 171
Query: 192 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLL 245
E+ +++ FGL SR + Y P E L T S ++S+G LL
Sbjct: 172 VGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 246 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+++S P + + ++ LE DD E+ L +C + +P ERP+
Sbjct: 229 WEIVSLGGTP--YCGMTCAELYEKLPQGYRLEKPLNCDD--EVYDLMRQCWREKPYERPS 284
Query: 306 PKSLVTALSPLQKE 319
++ +L+ + +E
Sbjct: 285 FAQILVSLNRMLEE 298
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 114/279 (40%), Gaps = 26/279 (9%)
Query: 53 KNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSV 110
K++ F N +++ E ++KG+ + I VK W R F EE +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 111 GQLRNNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA 168
+ + +LG C L+ +MP +L L + + ++ L +A
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMA 121
Query: 169 QALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTPPEY 226
+ + + T + H LN+ ++ DED R+S + G+ Y+ A+ PE
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP--AWVAPEA 179
Query: 227 LR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--- 278
L+ T R + + ++SF LL +L++ + +P DL N+++ LEG
Sbjct: 180 LQKKPEDTNRRSAD--MWSFAVLLWELVT-REVP---FADL---SNMEIGMKVALEGLRP 230
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317
+ +L C+ +P +RP +V L +Q
Sbjct: 231 TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220
L + L +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 121 LHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 221 FTPPEYLRTGRV------TPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIR 264
P TG+V +PE + I+S G +L +LL P S ++ R
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQME--R 233
Query: 265 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
R L + + FT E V + L P ERP +++
Sbjct: 234 VRTLTDVRNLKFPPLFTQKYPCEYV-MVQDMLSPSPMERPEAINII 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
R+FL EA +GQ + + L G +++ E+M N L L R
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL------------R 109
Query: 161 LR----VVLHLAQALEYCTSKGRAL------YHDLNAYRILFDEDGNPRLSTFGLMK--- 207
L V+ L L S R L + DL A IL + + ++S FGL +
Sbjct: 110 LNDGQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 169
Query: 208 -NSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
NS D S+ + +T PE + + T S +S+G ++ +++S
Sbjct: 170 ENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 112 QLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 170
Q N+ L C + + RL V EY+ L H+ P + A + LA
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA-- 133
Query: 171 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 226
L Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP PE
Sbjct: 134 LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI 192
Query: 227 LRTGRVTPESVIYSFGTLLLDLLSGK 252
LR ++ G L+ ++++G+
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVK A R+ + E + + L N+ + NLLG C G L++ EY L
Sbjct: 72 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 131
Query: 145 KHL-------FHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRA-------LYHDLNAYR 189
L +T P + L + L + Y +KG A ++ DL A
Sbjct: 132 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 191
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 243
IL ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 192 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 251
Query: 244 LLLDLLS-GKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L +L S G P +D +I++ +ML+ + E+ + C
Sbjct: 252 FLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLS--------PEHAPAEMYDIMKTCWD 302
Query: 298 YEPRERPNPKSLV 310
+P +RP K +V
Sbjct: 303 ADPLKRPTFKQIV 315
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
E Q N+ L C + + RL V EY+ L H+ P + A
Sbjct: 59 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 118
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ LA L Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 119 ISLA--LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 175
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
PE LR ++ G L+ ++++G+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVV 164
E Q N+ L C + + RL V EY+ L H+ P + A
Sbjct: 55 EKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE 114
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+ LA L Y +G +Y DL +L D +G+ +L+ +G+ K ++ TP
Sbjct: 115 ISLA--LNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 171
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
PE LR ++ G L+ ++++G+
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 21/239 (8%)
Query: 70 EKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
EKA Y K+ + I K + L E R + R+ LT L D
Sbjct: 30 EKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 82
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV-LHLAQALEYCTSKGRALYHDLNAY 188
V EY L FH + R R + AL+Y S+ +Y DL
Sbjct: 83 RLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 139
Query: 189 RILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 244
++ D+DG+ +++ FGL K +DG K + + PE L + G +
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ +++ G+ P + D + L ++ E +F G E L S L+ +P++R
Sbjct: 200 MYEMMCGR--LPFYNQDHEKLFELILME----EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 21/239 (8%)
Query: 70 EKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
EKA Y K+ + I K + L E R + R+ LT L D
Sbjct: 29 EKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 81
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV-LHLAQALEYCTSKGRALYHDLNAY 188
V EY L FH + R R + AL+Y S+ +Y DL
Sbjct: 82 RLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 138
Query: 189 RILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 244
++ D+DG+ +++ FGL K +DG K + + PE L + G +
Sbjct: 139 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 198
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ +++ G+ P + D + L ++ E +F G E L S L+ +P++R
Sbjct: 199 MYEMMCGR--LPFYNQDHEKLFELILME----EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVK A R+ + E + + L N+ + NLLG C G L++ EY L
Sbjct: 56 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 145 KHL-------FHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRA-------LYHDLNAYR 189
L +T P + L + L + Y +KG A ++ DL A
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 243
IL ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 244 LLLDLLS-GKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L +L S G P +D +I++ +ML+ + E+ + C
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLS--------PEHAPAEMYDIMKTCWD 286
Query: 298 YEPRERPNPKSLV 310
+P +RP K +V
Sbjct: 287 ADPLKRPTFKQIV 299
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVK A R+ + E + + L N+ + NLLG C G L++ EY L
Sbjct: 74 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 133
Query: 145 KHL-------FHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRA-------LYHDLNAYR 189
L +T P + L + L + Y +KG A ++ DL A
Sbjct: 134 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 193
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 243
IL ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 194 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 253
Query: 244 LLLDLLS-GKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L +L S G P +D +I++ +ML+ + E+ + C
Sbjct: 254 FLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLS--------PEHAPAEMYDIMKTCWD 304
Query: 298 YEPRERPNPKSLV 310
+P +RP K +V
Sbjct: 305 ADPLKRPTFKQIV 317
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 21/239 (8%)
Query: 70 EKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 129
EKA Y K+ + I K + L E R + R+ LT L D
Sbjct: 31 EKATGRYYAMKILKKEVIVAK-------DEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 83
Query: 130 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV-LHLAQALEYCTSKGRALYHDLNAY 188
V EY L FH + R R + AL+Y S+ +Y DL
Sbjct: 84 RLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 140
Query: 189 RILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 244
++ D+DG+ +++ FGL K +DG K + + PE L + G +
Sbjct: 141 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 200
Query: 245 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 303
+ +++ G+ P + D + L ++ E +F G E L S L+ +P++R
Sbjct: 201 MYEMMCGR--LPFYNQDHEKLFELILME----EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 30/256 (11%)
Query: 85 RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAEYMPNE 141
R +AVK A + R + E + + + ++ + NLLG C + G +++ E+
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 142 TLAKHL------FHWETHPMKWAMRLRVVLHL-------AQALEYCTSKGRALYHDLNAY 188
L+ +L F P + HL A+ +E+ S+ + ++ DL A
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAAR 177
Query: 189 RILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF 241
IL E ++ FGL ++ R G + L + PE + T +S ++SF
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 242 GTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 300
G LL ++ S G P +D R L+ T + D E+ + C EP
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEP 292
Query: 301 RERPNPKSLVTALSPL 316
+RP LV L L
Sbjct: 293 SQRPTFSELVEHLGNL 308
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVK A R+ + E + + L N+ + NLLG C G L++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 145 KHL-------FHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRA-------LYHDLNAYR 189
L +T P + L + L + Y +KG A ++ DL A
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 243
IL ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 199 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 244 LLLDLLS-GKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L +L S G P +D +I++ +ML+ + E+ + C
Sbjct: 259 FLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLS--------PEHAPAEMYDIMKTCWD 309
Query: 298 YEPRERPNPKSLV 310
+P +RP K +V
Sbjct: 310 ADPLKRPTFKQIV 322
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 225
ALEY SK +Y DL IL D++G+ +++ FG K D + L TP PE
Sbjct: 118 ALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VTYXLCGTPDYIAPE 173
Query: 226 YLRTGRVTPESVIYSFGTLLLDLLSG 251
+ T +SFG L+ ++L+G
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 19/203 (9%)
Query: 85 RRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
+ +AVK ++ ++ E R + L + + L LV EY
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 143 LAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
+ +L H + + R + A++YC K ++ DL A +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIA 155
Query: 202 TFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPS 257
FG G T P PE + + PE ++S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 258 HALDLIRDRNLQMLTDSCLEGQF 280
D +NL+ L + L G++
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 87 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETLA 144
+AVK A R+ + E + + L N+ + NLLG C G L++ EY L
Sbjct: 79 VAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 138
Query: 145 KHL-------FHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRA-------LYHDLNAYR 189
L +T P + L + L + Y +KG A ++ DL A
Sbjct: 139 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 198
Query: 190 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGT 243
IL ++ FGL ++ ++ +Y + + PE + T ES ++S+G
Sbjct: 199 ILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 258
Query: 244 LLLDLLS-GKHIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 297
L +L S G P +D +I++ +ML+ + E+ + C
Sbjct: 259 FLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLS--------PEHAPAEMYDIMKTCWD 309
Query: 298 YEPRERPNPKSLV 310
+P +RP K +V
Sbjct: 310 ADPLKRPTFKQIV 322
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 19/203 (9%)
Query: 85 RRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
+ +AVK ++ ++ E R + L + + L LV EY
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 143 LAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
+ +L H + + R + A++YC K ++ DL A +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIA 155
Query: 202 TFGLMKNSRDGKSYSTNLAFTP---PEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPS 257
FG G T P PE + + PE ++S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 258 HALDLIRDRNLQMLTDSCLEGQF 280
D +NL+ L + L G++
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 29/260 (11%)
Query: 80 KLENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE-GDERLLVAE 136
K R +AVK A + R + E + + + ++ + NLLG C + G +++ E
Sbjct: 55 KTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVE 114
Query: 137 YMPNETLAKHLFHWETHPMKWAMR------------LRVVLHLAQALEYCTSKGRALYHD 184
+ L+ +L + + + +A+ +E+ S+ + ++ D
Sbjct: 115 FCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR-KXIHRD 173
Query: 185 LNAYRILFDEDGNPRLSTFGLMKN-------SRDGKSYSTNLAFTPPEYLRTGRVTPESV 237
L A IL E ++ FGL ++ R G + L + PE + T +S
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA-RLPLKWMAPETIFDRVYTIQSD 232
Query: 238 IYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296
++SFG LL ++ S G P +D R L+ T + D E+ + C
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYTTPEMYQTMLDCW 288
Query: 297 QYEPRERPNPKSLVTALSPL 316
EP +RP LV L L
Sbjct: 289 HGEPSQRPTFSELVEHLGNL 308
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 17/185 (9%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAM 159
++ E R + L + + L LV EY + +L H +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 219
+ R + A++YC K ++ DL A +L D D N +++ FG G T
Sbjct: 118 KFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 220 AFTP---PEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
P PE + + PE ++S G +L L+SG S D +NL+ L +
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERV 225
Query: 276 LEGQF 280
L G++
Sbjct: 226 LRGKY 230
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 166 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA---FT 222
+ A++YC K ++ DL A +L D D N +++ FG G T +
Sbjct: 114 QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYA 172
Query: 223 PPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 280
PE + + PE ++S G +L L+SG S D +NL+ L + L G++
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERVLRGKY 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EY N TL L H E + R+ + +AL Y S+G ++ DL I DE
Sbjct: 95 EYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDES 152
Query: 196 GNPRLSTFGLMKN-----------SRDGKSYSTNLA-------FTPPEYLR-TGRVTPES 236
N ++ FGL KN S++ S NL + E L TG +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGTELVRLASR 294
+YS G + +++ P S ++ R L+ L +E F D+ ++
Sbjct: 213 DMYSLGIIFFEMI----YPFSTGME--RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 266
Query: 295 CLQYEPRERPNPKSLVTA 312
+ ++P +RP ++L+ +
Sbjct: 267 LIDHDPNKRPGARTLLNS 284
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 162 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 162 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 162 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 162 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 214
R + + AQ LE+ + +Y DL +L D+DGN R+S GL + G K
Sbjct: 290 RAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 215 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
Y+ F PE L ++ G L ++++ +
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 222
++ AL + KG +Y DL I+ + G+ +L+ FGL K S DG ++ + +
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYM 188
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 256
PE L +S G L+ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGA--PP 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 20/186 (10%)
Query: 85 RRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 141
++AVK NR + + E +++ R+ + L + +V EY+
Sbjct: 37 HKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG 96
Query: 142 TLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 200
L ++ H M+ R+ + A++YC + ++ DL +L D N ++
Sbjct: 97 ELFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKI 152
Query: 201 STFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSG---- 251
+ FGL DG+ + + PE + +GR+ PE I+S G +L LL G
Sbjct: 153 ADFGLSNMMSDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 252 --KHIP 255
+H+P
Sbjct: 212 DDEHVP 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EY N TL L H E + R+ + +AL Y S+G ++ DL I DE
Sbjct: 95 EYCENGTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDES 152
Query: 196 GNPRLSTFGLMKN-----------SRDGKSYSTNLA-------FTPPEYLR-TGRVTPES 236
N ++ FGL KN S++ S NL + E L TG +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGTELVRLASR 294
+YS G + +++ P S ++ R L+ L +E F D+ ++
Sbjct: 213 DMYSLGIIFFEMI----YPFSTGME--RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 266
Query: 295 CLQYEPRERPNPKSLVTA 312
+ ++P +RP ++L+ +
Sbjct: 267 LIDHDPNKRPGARTLLNS 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 105 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP---MKWAMRL 161
+EA+ L++ + L G C + LV E+ L + L P + WA+++
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI 114
Query: 162 RVVLHLAQALEYCTSKGRA--LYHDLNAYRILF---DEDGNP-----RLSTFGLMKN-SR 210
A+ + Y + ++ DL + IL E+G+ +++ FGL + R
Sbjct: 115 ------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 211 DGK-SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
K S + A+ PE +R + S ++S+G LL +LL+G+
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----P 224
QAL Y ++G ++ D+ + IL DG +LS FG L TP P
Sbjct: 152 QALAYLHAQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 225 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 256
E + E I+S G ++++++ G+ PP
Sbjct: 211 EVISRSLYATEVDIWSLGIMVIEMVDGE--PP 240
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 18/195 (9%)
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 191
+ E+ TL + + + + L + + + ++Y SK + ++ DL I
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIF 168
Query: 192 FDEDGNPRLSTFGLMKNSR-DGKSYSTN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDL 248
+ ++ FGL+ + + DGK + L + PE + + E +Y+ G +L +L
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 249 LSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 306
L H D + + L D + F + T L +L S+ +P +RPN
Sbjct: 229 L--------HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK----KPEDRPNT 276
Query: 307 KSLVTALSPLQKETE 321
++ L+ +K E
Sbjct: 277 SEILRTLTVWKKSPE 291
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 80/203 (39%), Gaps = 19/203 (9%)
Query: 85 RRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
+ +AVK ++ ++ E R L + + L LV EY
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 143 LAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
+ +L H + + R + A++YC K ++ DL A +L D D N +++
Sbjct: 100 VFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADXNIKIA 155
Query: 202 TFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPS 257
FG G ++ + PE + + PE ++S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 258 HALDLIRDRNLQMLTDSCLEGQF 280
D +NL+ L + L G++
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAM 159
++ E R + L + + L LV EY + +L H +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---YS 216
+ R + A++YC K ++ DL A +L D D N +++ FG G +
Sbjct: 118 KFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC 173
Query: 217 TNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ + PE + + PE ++S G +L L+SG S D +NL+ L +
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFD---GQNLKELRERV 225
Query: 276 LEGQF 280
L G++
Sbjct: 226 LRGKY 230
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 220
L + + +A+A+E+ SKG ++ DL I F D ++ FGL+ + T L
Sbjct: 167 LHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 221 FTPPEYLRTGRV------TPESV----------IYSFGTLLLDLL 249
P G+V +PE + I+S G +L +LL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 14/153 (9%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
++ + + +ALE+ SK ++ D+ +L + G ++ FG+ D + + +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 222 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
P Y+ R+ PE S I+S G +++L + S + L+ +
Sbjct: 217 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVV 271
Query: 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+ D E V S+CL+ +ERP
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 304
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 19/203 (9%)
Query: 85 RRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
+ +AVK ++ ++ E R + L + + L LV EY
Sbjct: 40 KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 143 LAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
+ +L H + + R + A++YC K ++ DL A +L D D N +++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-FIVHRDLKAENLLLDADMNIKIA 155
Query: 202 TFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPS 257
FG G ++ + PE + + PE ++S G +L L+SG S
Sbjct: 156 DFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----S 210
Query: 258 HALDLIRDRNLQMLTDSCLEGQF 280
D +NL+ L + L G++
Sbjct: 211 LPFD---GQNLKELRERVLRGKY 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 87 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVAEYMPNETLA 144
+AVK+ R F E + + L ++ + G E LV EY+P+ L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 145 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
L + H + R++L+ +Q +EY S+ R ++ DL A IL + + + +++
Sbjct: 99 DFL---QRHRARLDAS-RLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIA 153
Query: 202 TFGLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 250
FGL K K + + + PE L + +S ++SFG +L +L +
Sbjct: 154 DFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLAFT 222
++ AL + KG +Y DL I+ + G+ +L+ FGL K S DG + + +
Sbjct: 130 ISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYM 188
Query: 223 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPP 256
PE L +S G L+ D+L+G PP
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGA--PP 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 9/148 (6%)
Query: 118 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK 177
LT L C D V EY+ L H+ + K + ++ L + +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 178 GRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRTGRVT 233
G +Y DL ++ D +G+ +++ FG+ K + DG + + + PE +
Sbjct: 140 G-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 234 PESVIYSFGTLLLDLLSGKHIPPSHALD 261
+++G LL ++L+G+ PP D
Sbjct: 199 KSVDWWAYGVLLYEMLAGQ--PPFDGED 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 21 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 81 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAEGMNYLEDR-RLVH 137
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 197
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 198 DVWSYGVTVWELMT 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 237
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 238 -IYSFGTLLLDLLSGKHIP 255
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 237
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 238 -IYSFGTLLLDLLSGKHIP 255
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 142
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L + S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 84 GICLTSTVQ-LITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 142
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 237
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 238 -IYSFGTLLLDLLSGKHIP 255
+S G +L LL G H P
Sbjct: 373 DWFSLGCMLFKLLRG-HSP 390
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 85 GICLTSTVQLIM-QLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 141
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 202 DVWSYGVTVWELMT 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 49 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 109 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 165
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 225
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 226 DVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 30 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 90 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 146
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 206
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 207 DVWSYGVTVWELMT 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 180 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESV 237
+Y DL IL DE G+ R+S GL + K +++ + PE L+ G S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 238 -IYSFGTLLLDLLSGKHIP 255
+S G +L LL G H P
Sbjct: 372 DWFSLGCMLFKLLRG-HSP 389
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 147
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 87 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 18 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 78 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 134
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 194
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 195 DVWSYGVTVWELMT 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 144
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 205 DVWSYGVTVWELMT 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 34 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 94 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 150
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 210
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 211 DVWSYGVTVWELMT 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 85 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 141
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 202 DVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 27 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 87 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 143
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 204 DVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 84 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FGL K + K Y P +++ + T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA 168
++G L + + LLG C G LV +Y+P +L H+ + + L + +A
Sbjct: 86 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIA 143
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEY- 226
+ + Y G ++ +L A +L +++ FG+ D K + A TP ++
Sbjct: 144 KGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 227 ----LRTGRVTPESVIYSFGTLLLDLLS 250
+ G+ T +S ++S+G + +L++
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 33/258 (12%)
Query: 86 RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVAEYMPNETL 143
++AVK A R+ + E + + QL ++ + NLLG C L+ EY L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 144 AKHL-----------FHWETHP----------MKWAMRLRVVLHLAQALEYCTSKGRALY 182
+L +E + + L +A+ +E+ K ++
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVH 195
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPES 236
DL A +L ++ FGL ++ +Y + + PE L G T +S
Sbjct: 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 296
++S+G LL ++ S + P + + D N L + + E+ + C
Sbjct: 256 DVWSYGILLWEIFS-LGVNPYPGIPV--DANFYKLIQNGFKMDQPFYATEEIYIIMQSCW 312
Query: 297 QYEPRERPNPKSLVTALS 314
++ R+RP+ +L + L
Sbjct: 313 AFDSRKRPSFPNLTSFLG 330
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
E+ TL + + + + L + + + ++Y SK + + DL I +
Sbjct: 100 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDT 158
Query: 196 GNPRLSTFGLMKNSR-DGKSYSTN--LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
++ FGL+ + + DGK + L + PE + + E +Y+ G +L +LL
Sbjct: 159 KQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--- 215
Query: 253 HIPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 310
H D + + L D + F + T L +L S+ +P +RPN ++
Sbjct: 216 -----HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSK----KPEDRPNTSEIL 266
Query: 311 TALSPLQKETE 321
L+ +K E
Sbjct: 267 RTLTVWKKSPE 277
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA 168
++G L + + LLG C G LV +Y+P +L H+ + + L + +A
Sbjct: 68 AIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIA 125
Query: 169 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEY- 226
+ + Y G ++ +L A +L +++ FG+ D K + A TP ++
Sbjct: 126 KGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 227 ----LRTGRVTPESVIYSFGTLLLDLLS 250
+ G+ T +S ++S+G + +L++
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 114
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K++
Sbjct: 115 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 14/153 (9%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
++ + + +ALE+ SK ++ D+ +L + G ++ FG+ D + +
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 222 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
P Y+ R+ PE S I+S G +++L + S + L+ +
Sbjct: 173 KP--YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVV 227
Query: 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+ D E V S+CL+ +ERP
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 260
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + S+
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-----NSRDGKSYSTNLAFTPP 224
ALE+ G +Y D+ IL D +G+ L+ FGL K + + + + P
Sbjct: 171 ALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 225 EYLRTGRVTPESVI--YSFGTLLLDLLSG 251
+ +R G + + +S G L+ +LL+G
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 116
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K +
Sbjct: 117 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
++ L +AL + + ++ D+ IL D GN +L FG+ D + + +
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 222 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
P Y+ R+ P S ++S G L +L +G+ P + + D+ Q++
Sbjct: 189 RP--YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF--PYPKWNSVFDQLTQVVK 244
Query: 273 DSCLEGQFTDDDGTE----LVRLASRCLQYEPRERPNPKSLV 310
Q ++ + E + + CL + +RP K L+
Sbjct: 245 GD--PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAF 221
+V L + L+Y S G ++ DL + +ED R+ FGL + + + Y +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHI-PPSHALDLIR 264
PE + ++V I+S G ++ +LL GK + P S +D ++
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 93/234 (39%), Gaps = 22/234 (9%)
Query: 86 RIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 142
++AVK NR + + E +++ R+ + L + +V EY+
Sbjct: 43 KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE 102
Query: 143 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 202
L ++ K + RL + ++YC + ++ DL +L D N +++
Sbjct: 103 LFDYICKNGRLDEKESRRL--FQQILSGVDYC-HRHMVVHRDLKPENVLLDAHMNAKIAD 159
Query: 203 FGLMKNSRDGKSYSTNLA---FTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPS 257
FGL DG+ + + PE + +GR+ PE I+S G +L LL G +P
Sbjct: 160 FGLSNMMSDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGT-LP-- 215
Query: 258 HALDLIRDRNLQMLTDSCLEGQFTDDD--GTELVRLASRCLQYEPRERPNPKSL 309
D ++ L +G F ++ L LQ +P +R K +
Sbjct: 216 -----FDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLAF 221
+V L + L+Y S G ++ DL + +ED R+ FGL + + + Y +
Sbjct: 136 LVYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHI-PPSHALDLIR 264
PE + ++V I+S G ++ +LL GK + P S +D ++
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 87 IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+A+K P ++ L+EA + + N + LLG C + L+ + MP L
Sbjct: 47 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 105
Query: 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205
++ + + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 106 YVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGL 163
Query: 206 MK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPESVIYSFGTLLLDLLS 250
K + K Y P +++ + T +S ++S+G + +L++
Sbjct: 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 87 IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+A+K P ++ L+EA + + N + LLG C + L+ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLD 112
Query: 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205
++ + + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 113 YVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGL 170
Query: 206 MK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPESVIYSFGTLLLDLLS 250
K + K Y P +++ + T +S ++S+G + +L++
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 87 IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 145
+A+K P ++ L+EA + + N + LLG C +L++ + MP L
Sbjct: 54 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLD 112
Query: 146 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 205
++ + + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 113 YVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGL 170
Query: 206 MK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPESVIYSFGTLLLDLLS 250
K + K Y P +++ + T +S ++S+G + +L++
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 106 EARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV- 164
E+R + R+ LT L D V EY L FH + R R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYG 111
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG---KSYSTNLA 220
+ ALEY S+ +Y D+ ++ D+DG+ +++ FGL K DG K +
Sbjct: 112 AEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 252
+ PE L + G ++ +++ G+
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 123 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 117 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 118 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 116 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 211
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 146 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 119 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 48 TLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQF 103
+++Q ++ T E+ I+ E G+ A VYK + E A K + + + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+ E + + + LL + ++ E+ + + E P+ + V
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVV 140
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGK---SYSTNL 219
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+
Sbjct: 141 CKQTLDALNYL-HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTP 199
Query: 220 AFTPPEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264
+ PE + T + P ++ ++S G L+++ + PP H L+ +R
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK--SYSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ + ++
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 138 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 139 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 48 TLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQF 103
+++Q ++ T E+ I+ E G+ A VYK + E A K + + + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+ E + + + LL + ++ E+ + + E P+ + V
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVV 140
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGK---SYSTNL 219
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + S+
Sbjct: 141 CKQTLDALNYL-HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTP 199
Query: 220 AFTPPEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264
+ PE + T + P ++ ++S G L+++ + PP H L+ +R
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 181 LYHDLNAYRILFDEDGNPRLSTFG-LMKNSRDGKSYSTNLAFTP----PEYLRT-----G 230
++ D+ IL D +G+ RL+ FG +K DG S+ TP PE L+ G
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 231 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
R PE +S G + ++L G+ P +A L+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 287
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 142 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 141 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 236
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 19/133 (14%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 223
+A AL Y S +Y DL IL D G+ L+ FGL K + + S ++ TP
Sbjct: 148 IASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYL 206
Query: 224 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNLQM---LTD 273
PE L + G +L ++L G +PP ++ D I ++ LQ+ +T+
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRNTAEMYDNILNKPLQLKPNITN 264
Query: 274 SC---LEGQFTDD 283
S LEG D
Sbjct: 265 SARHLLEGLLQKD 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 167 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKS--YSTNLA 220
+ ALEY KG ++ DL IL +ED + +++ FG K S+ ++ +
Sbjct: 144 IVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 221 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
+ PE L S +++ G ++ L++G +PP A
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAG--LPPFRA 239
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 103/268 (38%), Gaps = 28/268 (10%)
Query: 82 ENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 139
E+ R+ +K N RM+ + + E + +++ + E +V +Y
Sbjct: 47 EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Query: 140 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 199
L K + + + L + + AL++ + + L+ D+ + I +DG +
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQ 165
Query: 200 LSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 255
L FG+ + + TP PE +S I++ G +L +L + K
Sbjct: 166 LGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK--- 222
Query: 256 PSHALDLIRDRNLQMLTDSCLEGQF---TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 312
HA + +NL + + G F + +L L S+ + PR+RP+ S++
Sbjct: 223 --HAFEAGSMKNLVL---KIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277
Query: 313 ----------LSPLQKETEFSISPLCRF 330
LSP EF + +F
Sbjct: 278 GFIAKRIEKFLSPQLIAEEFCLKTFSKF 305
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 170 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----P 224
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + TP P
Sbjct: 120 ALNYL-HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 225 EYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264
E + T + P ++ ++S G L+++ + PP H L+ +R
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 26/257 (10%)
Query: 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMA------WPDPRQFLEEARSVGQLRNNRLT 119
E G + VY + + N +A+K+ + W D ++E R + +LR+
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD---IIKEVRFLQKLRHPNTI 117
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA-QALEYCTSKG 178
GC LV EY A L P++ + + V H A Q L Y S
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQ-EVEIAAVTHGALQGLAYLHSHN 174
Query: 179 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPE 235
++ D+ A IL E G +L FG + + PE + G+ +
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++S G ++L K PP ++ + Q + + G +++
Sbjct: 234 VDVWSLGITCIELAERK--PPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVD 287
Query: 294 RCLQYEPRERPNPKSLV 310
CLQ P++RP + L+
Sbjct: 288 SCLQKIPQDRPTSEVLL 304
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 86 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 142
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 26/257 (10%)
Query: 67 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMA------WPDPRQFLEEARSVGQLRNNRLT 119
E G + VY + + N +A+K+ + W D ++E R + +LR+
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD---IIKEVRFLQKLRHPNTI 78
Query: 120 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA-QALEYCTSKG 178
GC LV EY A L P++ + + V H A Q L Y S
Sbjct: 79 QYRGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQ-EVEIAAVTHGALQGLAYLHSHN 135
Query: 179 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPE 235
++ D+ A IL E G +L FG + + PE + G+ +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK 194
Query: 236 SVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLAS 293
++S G ++L K PP ++ + Q + + G +++
Sbjct: 195 VDVWSLGITCIELAERK--PPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVD 248
Query: 294 RCLQYEPRERPNPKSLV 310
CLQ P++RP + L+
Sbjct: 249 SCLQKIPQDRPTSEVLL 265
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 84 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 201 DVWSYGVTVWELMT 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR----------TG 230
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 231 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
+ PE +S G + ++L G+ P +A L+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 287
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 142
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR----------TG 230
++ D+ +L D +G+ RL+ FG D + +++A P+Y+ G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 231 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 263
+ PE +S G + ++L G+ P +A L+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGE--TPFYAESLV 303
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 31 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C + L+ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 91 GICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 147
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 208 DVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 86 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 142
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 203 DVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 101 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 160
++ L+EA + + N + LLG C + L+ + MP L ++ + + +
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDN-IGSQYL 153
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNL 219
L + +A+ + Y + R ++ DL A +L + +++ FGL K + K Y
Sbjct: 154 LNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 220 AFTPPEYLRTGRV-----TPESVIYSFGTLLLDLLS 250
P +++ + T +S ++S+G + +L++
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 69 GEKAPNVVYKGKL--ENQRR---IAVKRFNRMAWPDP-RQFLEEARSVGQLRNNRLTNLL 122
G A VYKG E ++ +A+K P ++ L+EA + + N + LL
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
G C +L++ + MP L ++ + + + L + +A+ + Y + R ++
Sbjct: 88 GICLTSTVQLIM-QLMPFGCLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 144
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRV-----TPES 236
DL A +L + +++ FG K + K Y P +++ + T +S
Sbjct: 145 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 237 VIYSFGTLLLDLLS 250
++S+G + +L++
Sbjct: 205 DVWSYGVTVWELMT 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 29/198 (14%)
Query: 136 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 195
EY N TL L H E + R+ + +AL Y S+G ++ +L I DE
Sbjct: 95 EYCENRTLYD-LIHSENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRNLKPXNIFIDES 152
Query: 196 GNPRLSTFGLMKN-----------SRDGKSYSTNLA-------FTPPEYLR-TGRVTPES 236
N ++ FGL KN S++ S NL + E L TG +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 237 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGTELVRLASR 294
YS G + + + P S + R L+ L +E F D+ ++
Sbjct: 213 DXYSLGIIFFEXI----YPFSTGXE--RVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRL 266
Query: 295 CLQYEPRERPNPKSLVTA 312
+ ++P +RP ++L+ +
Sbjct: 267 LIDHDPNKRPGARTLLNS 284
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 17/230 (7%)
Query: 48 TLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQF 103
+++Q ++ T E+ I+ E G+ A VYK + E A K + + + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 163
+ E + + + LL + ++ E+ + + E P+ + V
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVV 140
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLA-- 220
AL Y + ++ DL A ILF DG+ +L+ FG+ KN+R + +
Sbjct: 141 CKQTLDALNYL-HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTP 199
Query: 221 -FTPPEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 264
+ PE + T + P ++ ++S G L+++ + PP H L+ +R
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE--PPHHELNPMR 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 17/212 (8%)
Query: 104 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL-- 161
++E + QL + + E +E +V E L++ + H++ R
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
+ + L ALE+ S+ R ++ D+ + G +L GL + + + +L
Sbjct: 140 KYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 222 TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 277
TP PE + +S I+S G LL ++ + + P + + NL L +
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS--PFYGDKM----NLYSLCKKIEQ 252
Query: 278 GQF----TDDDGTELVRLASRCLQYEPRERPN 305
+ +D EL +L + C+ +P +RP+
Sbjct: 253 CDYPPLPSDHYSEELRQLVNMCINPDPEKRPD 284
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EYMP + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EYMP + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 25/139 (17%)
Query: 181 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR----- 231
++ DL IL D++ RLS FG + G+ L TP PE L+
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-ELCGTPGYLAPEILKCSMDETHP 280
Query: 232 -VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT------DDD 284
E +++ G +L LL+G PP R + ML +EGQ+ DD
Sbjct: 281 GYGKEVDLWACGVILFTLLAGS--PP-----FWHRRQILMLR-MIMEGQYQFSSPEWDDR 332
Query: 285 GTELVRLASRCLQYEPRER 303
+ + L SR LQ +P R
Sbjct: 333 SSTVKDLISRLLQVDPEAR 351
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 69 GEKAPNVVYKGKLENQRRI-AVKRF---NRMAWPDP--RQFLEEARSVGQLRNNRLTNLL 122
GE VYK + +N +I A+K+ +R D R L E + + +L + + LL
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 78
Query: 123 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 182
LV ++M ET + + + + + +L Q LEY + L+
Sbjct: 79 DAFGHKSNISLVFDFM--ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL-HQHWILH 135
Query: 183 HDLNAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLA---FTPPEYLRTGRVTPESV- 237
DL +L DE+G +L+ FGL K+ ++Y + + PE L R+ V
Sbjct: 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVD 195
Query: 238 IYSFGTLLLDLL 249
+++ G +L +LL
Sbjct: 196 MWAVGCILAELL 207
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 18/124 (14%)
Query: 142 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 201
T A+ L P+ + ++ + + +AL Y K ++ D+ IL DE G +L
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLC 167
Query: 202 TFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTP----------ESVIYSFGTLLLDL 248
FG+ D K+ + A+ PE R+ P + ++S G L++L
Sbjct: 168 DFGISGRLVDDKAKDRSAGCAAYMAPE-----RIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 249 LSGK 252
+G+
Sbjct: 223 ATGQ 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 14/153 (9%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 221
++ + + +ALE+ SK ++ D+ +L + G + FG+ D + +
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 222 TPPEYLRTGRVTPE---------SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 272
P Y R+ PE S I+S G ++L + S + L+ +
Sbjct: 200 KP--YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPF---QQLKQVV 254
Query: 273 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 305
+ D E V S+CL+ +ERP
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT 287
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 79
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 139
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G++++ L TP
Sbjct: 140 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCGTPE 189
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 218
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 219 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 276 LEGQFTDD 283
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G++++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 231
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 197
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ- 253
Query: 292 ASRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 254 --KMLQTDPTARPTINELL 270
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 218
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 219 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 276 LEGQFTDD 283
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRIL 191
LV EY+ N T K L+ T +R ++ L +AL+YC SKG ++ D+ + ++
Sbjct: 112 LVFEYI-NNTDFKQLYQILT-----DFDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVM 164
Query: 192 FDEDGNP-RLSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRVTPESV-IYSFGTLLL 246
D RL +GL + + Y+ +A F PE L ++ S+ ++S G +L
Sbjct: 165 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 247 DLL 249
++
Sbjct: 225 SMI 227
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 231
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ- 249
Query: 292 ASRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 250 --KMLQTDPTARPTINELL 266
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 132 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 191 YFKGPELL 198
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 86
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 147 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 196
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 233
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 133 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 192 YFKGPELL 199
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 86
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 146
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 147 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 196
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 233
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 152 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 211 YFKGPELL 218
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 231
+ R ++ DL + +ED ++ FGL K DG+ T L TP PE L
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ- 249
Query: 292 ASRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 250 --KMLQTDPTARPTINELL 266
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 132 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 191 YFKGPELL 198
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 133 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRIL 191
LV EY+ N T K L+ T +R ++ L +AL+YC SKG ++ D+ + ++
Sbjct: 117 LVFEYI-NNTDFKQLYQILT-----DFDIRFYMYELLKALDYCHSKG-IMHRDVKPHNVM 169
Query: 192 FDEDGNP-RLSTFGLMKNSRDGKSYSTNLA---FTPPEYLRTGRVTPESV-IYSFGTLLL 246
D RL +GL + + Y+ +A F PE L ++ S+ ++S G +L
Sbjct: 170 IDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 247 DLL 249
++
Sbjct: 230 SMI 232
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 164 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLA-- 220
+ L +AL+YC S+G ++ D+ + ++ D + RL +GL + GK Y+ +A
Sbjct: 131 IYELLKALDYCHSQG-IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 221 -FTPPEYL 227
F PE L
Sbjct: 190 YFKGPELL 197
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + LT L + +V EY P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + LT L + +V EY P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 218
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 219 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 276 LEGQFTDD 283
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + LT L + +V EY P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYSTN 218
R++ + A++Y G ++ DL +L+ DED +S FGL K G ST
Sbjct: 120 RLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 219 L---AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 275
+ PE L + +S G + LL G PP + D N L +
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG--YPPFY------DENDAKLFEQI 230
Query: 276 LEGQFTDD 283
L+ ++ D
Sbjct: 231 LKAEYEFD 238
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWY 190
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 114
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 174
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 175 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 224
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 261
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 141 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 199
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCC---------CEGDERLLV--AEYMPNETLAKHLF 148
P L E + + L++ + NL+ C C+G L+ E+ L+ L
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 149 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG---- 204
+ +K RV+ L L Y + + L+ D+ A +L DG +L+ FG
Sbjct: 121 KFTLSEIK-----RVMQMLLNGL-YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 205 --LMKNSRDGKSYS--TNLAFTPPEYL 227
L KNS+ + + L + PPE L
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 193
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY+P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL +L D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY P + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
++ D+ G +++ FGL K + G+++ L TP PE + + ++ G L
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|3JU2|A Chain A, Crystal Structure Of Protein Smc04130 From Sinorhizobium
Meliloti 1021
Length = 284
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 99 DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWET------ 152
D R+ ++EA +G + L + G G + + A M E +A L H
Sbjct: 85 DNRRAVDEAAELGA---DCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLA 141
Query: 153 ----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 207
HPM A R V L QAL+ C + G + ++ Y + +D D +++ G MK
Sbjct: 142 IEPLHPMYAADRA-CVNTLGQALDICETLGPGVGVAIDVYHVWWDPDLANQIARAGKMK 199
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCC---------CEGDERLLV--AEYMPNETLAKHLF 148
P L E + + L++ + NL+ C C+G L+ E+ L+ L
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 149 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG---- 204
+ +K RV+ L L Y + + L+ D+ A +L DG +L+ FG
Sbjct: 120 KFTLSEIK-----RVMQMLLNGL-YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 173
Query: 205 --LMKNSRDGKSYS--TNLAFTPPEYL 227
L KNS+ + + L + PPE L
Sbjct: 174 FSLAKNSQPNRYXNRVVTLWYRPPELL 200
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%)
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCC---------CEGDERLLV--AEYMPNETLAKHLF 148
P L E + + L++ + NL+ C C+G L+ E+ L+ L
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 149 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG---- 204
+ +K RV+ L L Y + + L+ D+ A +L DG +L+ FG
Sbjct: 121 KFTLSEIK-----RVMQMLLNGL-YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
Query: 205 --LMKNSRDGKSYS--TNLAFTPPEYL 227
L KNS+ + + L + PPE L
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELL 201
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 141 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 199
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 236
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDG---KSYSTNLAFTPPEYLRTGRV 232
+ R ++ DL + +ED ++ FGL K DG K + PE L
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 233 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 292
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 193 SFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ-- 247
Query: 293 SRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 248 -KMLQTDPTARPTINELL 264
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY 195
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 129 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 187
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 140 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 198
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 137 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 195
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 94
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY P + HL E H +A ++ +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 155 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 204
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 26/279 (9%)
Query: 53 KNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSV 110
K++ F N +++ E ++KG+ + I VK W R F EE +
Sbjct: 3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 111 GQLRNNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA 168
+ + +LG C L+ + P +L L + + ++ L A
Sbjct: 62 RIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXA 121
Query: 169 QALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTPPEY 226
+ + T + H LN+ + DED R+S + G+ Y+ A+ PE
Sbjct: 122 RGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP--AWVAPEA 179
Query: 227 LR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--- 278
L+ T R + + +SF LL +L++ + +P DL N ++ LEG
Sbjct: 180 LQKKPEDTNRRSADX--WSFAVLLWELVT-REVP---FADL---SNXEIGXKVALEGLRP 230
Query: 279 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 317
+ +L C +P +RP +V L Q
Sbjct: 231 TIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 142 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 200
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 135 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 193
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 153 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 211
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 127 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 162 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG------LMKNSRDGKSY 215
RV+ L L Y + + L+ D+ A +L DG +L+ FG L KNS+ +
Sbjct: 129 RVMQMLLNGL-YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 216 S--TNLAFTPPEYL 227
+ L + PPE L
Sbjct: 188 NRVVTLWYRPPELL 201
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 136 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 194
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 127 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 185
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 150 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY P + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
++ D+ G +++ FGL K + G+++ L TP PE + + ++ G L
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 132 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 190
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 150 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 208
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 245
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 149 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 149 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 207
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 244
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 128 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 186
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 184
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 231
+ R ++ DL + +ED ++ FGL K DG+ L TP PE L
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 215
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ- 271
Query: 292 ASRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 272 --KMLQTDPTARPTINELL 288
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY P + HL E H +A ++ + +L+ +Y DL
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 171
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 229 IYEMAAG--YPPFFA 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVV 164
+ + L L + +V EY P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D Y +
Sbjct: 153 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWY 211
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 12/139 (8%)
Query: 177 KGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRTGR 231
+ R ++ DL + +ED ++ FGL K DG+ L TP PE L
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 217
Query: 232 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 291
+ E ++S G ++ LL GK P +++ L++ + + + L++
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGK---PPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ- 273
Query: 292 ASRCLQYEPRERPNPKSLV 310
+ LQ +P RP L+
Sbjct: 274 --KMLQTDPTARPTINELL 290
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ LA TP PE + + ++ G L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LAGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 86/219 (39%), Gaps = 29/219 (13%)
Query: 49 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR 108
E++K +G ++ +H E + K L+ Q+ + +K+ L E R
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMK-ILDKQKVVKLKQIEHT--------LNEKR 93
Query: 109 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVV 164
+ + L L + +V EY P + HL E H +A ++ +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 165 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP- 223
+L+ +Y DL ++ D+ G +++ FG K + G+++ L TP
Sbjct: 154 FEYLHSLD-------LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPE 203
Query: 224 ---PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA 259
PE + + ++ G L+ ++ +G PP A
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG--YPPFFA 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 130 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 188
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + + +
Sbjct: 126 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWY 184
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPS 257
PE + ++V I+S G ++ +LL+G+ + P
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 217
+R +L + AL K ++ DL IL D+D N +L+ FG G +S
Sbjct: 130 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 218 NLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 267
++ PE + E ++S G ++ LL+G H L +I N
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 268 LQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRER 303
Q G DD ++ V+ L SR L +P++R
Sbjct: 246 YQF-------GSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 157
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L DE G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 214
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 215 IYEMAAG--YPPFFA 227
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRI 190
LL EY L K+L +E +R +L ++ AL Y + R ++ DL I
Sbjct: 95 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL-HENRIIHRDLKPENI 153
Query: 191 LFDEDGNPRLS----TFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGT 243
+ + G RL G K G+ + L + PE L + T +SFGT
Sbjct: 154 VL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 212
Query: 244 LLLDLLSG 251
L + ++G
Sbjct: 213 LAFECITG 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 182 YHDLNAYRILFDEDGNPRLSTFGLMK----NSRDG--KSYSTNLAFTPPEYLRTGRVTPE 235
+ D+ +L DE N ++S FGL N+R+ L + PE L+ E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 236 SV-IYSFGTLLLDLLSGK 252
V ++S G +L +L+G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 132 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRI 190
LL EY L K+L +E +R +L ++ AL Y + R ++ DL I
Sbjct: 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL-HENRIIHRDLKPENI 152
Query: 191 LFDEDGNPRLS----TFGLMKNSRDGK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGT 243
+ + G RL G K G+ + L + PE L + T +SFGT
Sbjct: 153 VL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 211
Query: 244 LLLDLLSG 251
L + ++G
Sbjct: 212 LAFECITG 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 163 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAF 221
++ + + L+Y S ++ DL + +ED ++ FGL +++ D + Y +
Sbjct: 159 LIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY 217
Query: 222 TPPEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPP 256
PE + +V I+S G ++ +LL+G+ + P
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo
pdb|1N9E|B Chain B, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo
pdb|1N9E|C Chain C, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo
pdb|1N9E|D Chain D, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo
Length = 787
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 53 KNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQ---FLEEARS 109
KN S + ++++ E+ AP VY K + + + FN + WP+ Q +E A
Sbjct: 544 KNRASKYVMKDVDVEY-PWAPGTVYNTKQIAREVLEKEDFNGINWPENGQGILLIESAEE 602
Query: 110 VGQLRNNRLTNLL 122
N R N++
Sbjct: 603 TNSFGNPRAYNIM 615
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 170
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 228 IYEMAAG--YPPFFA 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 165
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 166 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 222
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 223 IYEMAAG--YPPFFA 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 133 LVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 188
+V EY+ + HL E H +A ++ + +L+ +Y DL
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPE 191
Query: 189 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 244
+L D+ G +++ FG K + G+++ L TP PE + + ++ G L
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVK-GRTWX--LCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 245 LLDLLSGKHIPPSHA 259
+ ++ +G PP A
Sbjct: 249 IYEMAAG--YPPFFA 261
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 217
+R +L + AL K ++ DL IL D+D N +L+ FG G +
Sbjct: 117 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
Query: 218 NLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 267
++ PE + E ++S G ++ LL+G H L +I N
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 232
Query: 268 LQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRER 303
Q G DD ++ V+ L SR L +P++R
Sbjct: 233 YQF-------GSPEWDDYSDTVKDLVSRFLVVQPQKR 262
>pdb|1HD8|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
Penicillin-Binding Protein 5 At 2.3 A Resolution
pdb|1NJ4|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
Penicillin-Binding Protein 5 At 1.9 A Resolution
pdb|1SDN|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
Penicillin-Binding Protein 5 Modified By Mercury
Length = 363
Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 184 DLNAYRILFDEDGNPR---------LSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTP 234
D N+ ++L +++ + R ++++ + + + GK T+L + TG
Sbjct: 24 DYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVF 83
Query: 235 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 276
+ G+ L+ L G +P S LIRD NLQ D+C+
Sbjct: 84 K------GSSLMFLKPGMQVPVSQ---LIRDINLQSGNDACV 116
>pdb|1KQF|A Chain A, Formate Dehydrogenase N From E. Coli
pdb|1KQG|A Chain A, Formate Dehydrogenase N From E. Coli
Length = 1015
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 8/137 (5%)
Query: 100 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 159
P+Q L +AR+ LR + N C G L+ + + + ++H E P
Sbjct: 28 PKQALAQARNYKLLRAKEIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVS 87
Query: 160 RLRVVLHLAQALEYCTSKGRALYHDLNA-----YRILFDEDGNPRLSTFGLMKNSRDGKS 214
R + A L+Y S+ R Y + A ++ + E+ R++ LMK RD
Sbjct: 88 RGALCPKGAGLLDYVNSENRLRYPEYRAPGSDKWQRISWEEAFSRIAK--LMKADRDANF 145
Query: 215 YSTN-LAFTPPEYLRTG 230
N T +L TG
Sbjct: 146 IEKNEQGVTVNRWLSTG 162
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 25/157 (15%)
Query: 161 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 217
+R +L + AL K ++ DL IL D+D N +L+ FG G +
Sbjct: 130 MRALLEVICALH----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 218 NLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRN 267
++ PE + E ++S G ++ LL+G H L +I N
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 268 LQMLTDSCLEGQFTDDDGTELVR-LASRCLQYEPRER 303
Q G DD ++ V+ L SR L +P++R
Sbjct: 246 YQF-------GSPEWDDYSDTVKDLVSRFLVVQPQKR 275
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,028,161
Number of Sequences: 62578
Number of extensions: 411773
Number of successful extensions: 1772
Number of sequences better than 100.0: 665
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 513
Number of HSP's that attempted gapping in prelim test: 1333
Number of HSP's gapped (non-prelim): 667
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)