BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019907
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XSJ0|UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus
GN=UCHL5 PE=2 SV=1
Length = 328
Score = 330 bits (845), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/335 (50%), Positives = 231/335 (68%), Gaps = 26/335 (7%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
WC +ESDPGVFTELI+ +G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+
Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67
Query: 63 VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
V++D +FFA QVINNACATQAI+S+LLNC D+ +G LS+ KEF+++F +KG
Sbjct: 68 VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
LA++NSD IR HNSFAR + F + K A K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMF-EFDAKTAAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
LG C DW+ V+PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ- 241
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
L E M L+ SEV A ++L+EEE K K+++ ENIR
Sbjct: 242 ---------LAEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIR 286
Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
RKHNY+PF+ LK LAE +QL PL+EKAK+K ++
Sbjct: 287 RKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 321
>sp|Q54N38|UCHL5_DICDI Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium
discoideum GN=uch2 PE=3 SV=1
Length = 343
Score = 329 bits (843), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/339 (50%), Positives = 228/339 (67%), Gaps = 17/339 (5%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR 61
WCTIESDPGVFTELI ++ VK +QVEELY+LD + L+PV GLIFLFKW E+++R
Sbjct: 6 GWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEK-EEENR 64
Query: 62 VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNFPPELKGLA 121
+ N N+FFA+QVI NACATQAILS+LLN I++G ELS K F +FPP +KG A
Sbjct: 65 TI--SDNENIFFANQVIQNACATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEA 122
Query: 122 INNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISL 181
I NS+ I+ HNSF +PF+ ++K K D +HFIS+IP G +YELDGLK+GP L
Sbjct: 123 IGNSELIKETHNSFTVQDPFIFSKKKNR-KPSDAFHFISFIPFQGKVYELDGLKKGPYCL 181
Query: 182 GPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKRER 241
G CT +WL++ P IQ+R+E+YS+ EIRFNLMAVIKNR+ ++ ++K+
Sbjct: 182 GDCTPD----NWLEIATPFIQKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKND 237
Query: 242 ILQQLASLQSERMVDK---------TSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWR 292
+ +L+ L S D T+ E LN ++ VN IE A +ILME+EKF+ W+
Sbjct: 238 LEIKLSELNSGSGGDNKEESGGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWK 297
Query: 293 TENIRRKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTS 331
ENIRRKHN+ P + N +K LAEK L+PLI+KAK + S
Sbjct: 298 DENIRRKHNFTPLILNLIKGLAEKDNLQPLIQKAKDQIS 336
>sp|Q9WUP7|UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus
GN=Uchl5 PE=2 SV=2
Length = 329
Score = 329 bits (843), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 232/335 (69%), Gaps = 25/335 (7%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
WC +ESDPGVFTELI+ +G QVEE++SL+ +S L+PV+GLIFLFKW+PGE+
Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGS 67
Query: 63 VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
V++D +FFA QVINNACATQAI+S+LLNC D+ +G LS+ KEF+++F +KG
Sbjct: 68 VVQDSRLETIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
LA++NSD IR HNSFAR + F + K K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMF-EFDTKTPAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
LG C DW+ V+PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR
Sbjct: 187 DLGACNQD----DWITAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-- 240
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
QLA + E M L+ SEV A ++L+EEE K K+++ ENIR
Sbjct: 241 -----QLA--EEEPMDTDQGSTVLSAIQSEV------ARNQMLIEEEVQKLKRYKIENIR 287
Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
RKHNY+PF+ LK LAE +QL PL+EKAK+K ++
Sbjct: 288 RKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322
>sp|Q9Y5K5|UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens
GN=UCHL5 PE=1 SV=3
Length = 329
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 234/335 (69%), Gaps = 25/335 (7%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
WC +ESDPGVFTELI+ +G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+
Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67
Query: 63 VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
V++D +FFA QVINNACATQAI+S+LLNC D+ +G LS+ KEF+++F +KG
Sbjct: 68 VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
LA++NSD IR HNSFAR + F + K + K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMF-EFDTKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
LG C DW+ V+PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR+
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQ- 241
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
L E +D + N LS + + E A ++L+EEE K K+++ ENIR
Sbjct: 242 ---------LAEEEPMDT---DQGNSMLSAIQS--EVAKNQMLIEEEVQKLKRYKIENIR 287
Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
RKHNY+PF+ LK LAE +QL PL+EKAK+K ++
Sbjct: 288 RKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322
>sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa
GN=UCHL5 PE=2 SV=1
Length = 329
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 233/335 (69%), Gaps = 25/335 (7%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
WC +ESDPGVFTELI+ +G QVEE++SL+ ++ L+PV+GLIFLFKW+PGE+
Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67
Query: 63 VIKDPN-PNLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLKEFTKNFPPELKG 119
V++D +FFA QVINNACATQAI+S+LLNC D+ +G LS+ KEF+++F +KG
Sbjct: 68 VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFDAAMKG 127
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
LA++NSD IR HNSFAR + F + K + K++D +HF+SY+PV+G LYELDGL+EGPI
Sbjct: 128 LALSNSDVIRQVHNSFARQQMF-EFDAKTSAKEEDAFHFVSYVPVNGRLYELDGLREGPI 186
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
LG C DW+ V+PVI++RI++YS+ EIRFNLMA++ +RK +Y ++ E QR
Sbjct: 187 DLGACNQD----DWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQR-- 240
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEE--KFKKWRTENIR 297
QLA + E M L+ SEV A ++L+EEE K K+++ ENIR
Sbjct: 241 -----QLA--EEEPMDTDQGSNMLSAIQSEV------AKNQMLIEEEVQKLKRYKIENIR 287
Query: 298 RKHNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSS 332
RKHNY+PF+ LK LAE +QL PL+EKAK+K ++
Sbjct: 288 RKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322
>sp|Q9UUB6|UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1
Length = 300
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 196/338 (57%), Gaps = 48/338 (14%)
Query: 1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPG-EKD 59
MSW TIESD GVFT+LI+ + VK V+V+ELYSLD+DSL +YG+IFLFKW +K
Sbjct: 1 MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKP 60
Query: 60 DRVVIKDPNPNLFFASQVINNACATQAILSILLNCPD-IDIGPELSKLKEFTKNFPPELK 118
D + D N+FFA QVINNACATQA+LS+LLN D ID+G LS+ K+F+K PPELK
Sbjct: 61 DGTMDYDSMDNIFFAKQVINNACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPPELK 120
Query: 119 GLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGP 178
G A+ NS+ IR HNSFAR +PF+ EE +AA +D+VYHFI+Y ++ V YELDGL+ P
Sbjct: 121 GEALGNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAAP 180
Query: 179 ISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRK 238
I+ G CT + + + VIQ RI Y +EIRFNLM + K++K A L
Sbjct: 181 INHGSCTKEE----FAEKAVSVIQARIANYDPAEIRFNLMVICKDKK----ASL------ 226
Query: 239 RERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRR 298
L E + D E I +E+EK +W+ EN R
Sbjct: 227 ----------LTREDLTD------------------EEKAASIAVEDEKRLRWKRENQLR 258
Query: 299 KHNYIPFLFNFLKILA----EKKQLKPLIEKAKQKTSS 332
+HN++ K+L +K +E AK K +S
Sbjct: 259 RHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAKYAS 296
>sp|Q09444|UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4
OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2
Length = 321
Score = 254 bits (650), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 138/335 (41%), Positives = 202/335 (60%), Gaps = 36/335 (10%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR 61
SWC IESDPGVFTE+++ V G+QVEELYSLD D RP YGLIFLFKWR G D+
Sbjct: 6 SWCLIESDPGVFTEMLRGFGVDGLQVEELYSLDDDKAMT-RPTYGLIFLFKWRQG--DET 62
Query: 62 VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDI--GPELSKLKEFTKNFPPELKG 119
I N+FFA Q I NACATQA++++L+N D D+ G L++ KEF + P +G
Sbjct: 63 TGIPSDKQNIFFAHQTIQNACATQALINLLMNVEDTDVKLGNILNQYKEFAIDLDPNTRG 122
Query: 120 LAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPI 179
++NS+ IR HNSF+R F E G+ +D YHF++Y+P+ +YELDGL+E P+
Sbjct: 123 HCLSNSEEIRTVHNSFSRQTLF--ELDIKGGESEDNYHFVTYVPIGNKVYELDGLRELPL 180
Query: 180 SLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIKNRKELYTAELKEFQRKR 239
+ Q + DW++ ++PVIQ+R+++YS+ EI FNLMA++ NRK+ + Q
Sbjct: 181 EVAEF---QKEQDWIEAIKPVIQQRMQKYSEGEITFNLMALVPNRKQ-------KLQEMM 230
Query: 240 ERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRK 299
E ++Q + + E + LNK++++ E+ K + +R EN RR+
Sbjct: 231 ENLIQANENNELEEQI-----ADLNKAIAD--------------EDYKMEMYRKENNRRR 271
Query: 300 HNYIPFLFNFLKILAEKKQLKPLIEKAKQKTSSSS 334
HNY PF+ +KILA++ +L L++ A Q S
Sbjct: 272 HNYTPFVIELMKILAKEGKLVGLVDNAYQAAKEKS 306
>sp|D3ZHS6|BAP1_RAT Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus
GN=Bap1 PE=3 SV=2
Length = 727
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 164/264 (62%), Gaps = 23/264 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDPNPN-LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
DD VI D N +FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK
Sbjct: 62 VSTLVDDTSVIDDDIVNSMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+
Sbjct: 122 FSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP G+ D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKVYPIDHGPW--GE-DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASL 249
Y A L + R+ +L+ L L
Sbjct: 239 VKYEARLHVLKGNRQTVLEALQQL 262
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 279 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 645 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 692
>sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1
PE=1 SV=2
Length = 729
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 163/264 (61%), Gaps = 23/264 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDP-NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
DD VI D N+FFA Q+I N+CAT A+LS+LLNC +D+GP LS++K+FTK
Sbjct: 62 VSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+
Sbjct: 122 FSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP G+ D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKVYPIDHGPW--GE-DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASL 249
Y A L + R+ +L+ L L
Sbjct: 239 IKYEARLHVLKVNRQTVLEALQQL 262
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 279 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 647 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 694
>sp|Q99PU7|BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1
PE=1 SV=1
Length = 728
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 163/264 (61%), Gaps = 23/264 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDP-NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
DD VI D N+FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK
Sbjct: 62 VSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+
Sbjct: 122 FSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP G+ D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKVYPIDHGPW--GE-DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASL 249
Y L + R+ +L+ L L
Sbjct: 239 IKYETRLHVLKVNRQTVLEALQQL 262
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 279 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 646 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 693
>sp|Q66JB6|BAP1_XENTR Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis
GN=bap1 PE=2 SV=1
Length = 685
Score = 214 bits (545), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 162/264 (61%), Gaps = 23/264 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDPN-PNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
DD V++D N+FFA Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK
Sbjct: 62 VSTLLDDTSVMEDEVVNNMFFAHQLIPNSCATHALLSVLLNCSGVHLGPTLSRIKEFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L+
Sbjct: 122 FSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKVYPIDHGPWA---EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASL 249
Y ++L + R+ +L+ L L
Sbjct: 239 LKYESKLHILKMNRQTVLEALQQL 262
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 277 ATEKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
++E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 601 SSEACLREELEKRKKFKIDDQRRTHNYDEFICAFISMLAQEGMLASLVEQ 650
>sp|Q5F3N6|BAP1_CHICK Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus GN=BAP1
PE=2 SV=1
Length = 700
Score = 213 bits (542), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 160/264 (60%), Gaps = 23/264 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR- 61
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW + R
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEESRSRRK 61
Query: 62 ---------VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
V+ D N+FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK
Sbjct: 62 VSTLVDETSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + A NS ARPEP +PE+Q +A + + +HF+SY+P+ G L+
Sbjct: 122 FSPESKGYAIGNAPELAKARNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKVYPIDHGPWA---DDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASL 249
Y ++L + R+ +L+ L L
Sbjct: 239 MKYESKLHILKMNRQTVLEALQQL 262
Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 279 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 618 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 665
>sp|Q52L14|BAP1_XENLA Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis
GN=bap1 PE=2 SV=1
Length = 618
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 162/265 (61%), Gaps = 25/265 (9%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDP--NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTK 111
DD V++D N N+FFA Q+I N+CAT A+LS+LLNC + +GP LS++KEFTK
Sbjct: 62 VSTLLDDTSVMEDEVVN-NMFFAHQLIPNSCATHALLSVLLNCGGVHLGPTLSRIKEFTK 120
Query: 112 NFPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVL 168
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L
Sbjct: 121 GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNR 224
+ELDGLK PI GP D +W + VI ERI + E IRFNLMAV+ +R
Sbjct: 181 FELDGLKVYPIDHGPWA---EDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDR 237
Query: 225 KELYTAELKEFQRKRERILQQLASL 249
+ Y +L + R+ +L+ L L
Sbjct: 238 RLKYEGKLNILKMNRQTVLEALQQL 262
>sp|A1L2G3|BAP1_DANRE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio GN=bap1
PE=2 SV=2
Length = 755
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 171/277 (61%), Gaps = 23/277 (8%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L + PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQS---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDPNPN-LFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
D+ VI D N +FFA Q+I N+CAT A+LS+LLNC +++G LS++K FTK
Sbjct: 62 VSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGMTLSRMKAFTKG 121
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVLY 169
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ L+
Sbjct: 122 FNPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRLF 181
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNRK 225
ELDGLK PI GP G+ D +W + VI ERI + E IRFNLMAV+ +R+
Sbjct: 182 ELDGLKAYPIDHGPW--GE-DEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRR 238
Query: 226 ELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEA 262
Y ++L +R R+ IL+ L ++ ++++ T E+
Sbjct: 239 IKYESKLDILKRNRQIILEGLQQIREKKVIRMTQQES 275
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 284 EEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 679 EVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQ 720
>sp|C4A0D9|BAP1_BRAFL Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma
floridae GN=BAP1 PE=3 SV=1
Length = 694
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 159/262 (60%), Gaps = 23/262 (8%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWR------- 54
W +ESDPG+FT L++ VKGVQVEE+Y L S PVYG IFLFKW
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDL---SKPIEGPVYGFIFLFKWSEERRSRR 60
Query: 55 ---PGEKDDRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTK 111
P ++ VV +D ++FFA Q+I N+CAT A+LS+LLNCP I +G L++LK FT+
Sbjct: 61 KVGPSMEESFVVDEDIVNDMFFAQQLIPNSCATHALLSVLLNCPQISLGSTLTRLKYFTR 120
Query: 112 NFPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVL 168
PE KG AI N I AHNS ARPEP +PE+Q ++ + + +HF+SY+ + L
Sbjct: 121 GMGPESKGWAIGNVPEIARAHNSHARPEPRHLPEKQTGISSVRTAEAFHFVSYVTTNDRL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSE----IRFNLMAVIKNR 224
+ELDGLK PI GP G+ + DW + + VI ERI + E IRFNLMAV+ +R
Sbjct: 181 FELDGLKPYPIDHGPW--GEKE-DWTEKFRRVISERIGNATGGENGHDIRFNLMAVVADR 237
Query: 225 KELYTAELKEFQRKRERILQQL 246
++ Y +L + R+ +L+ L
Sbjct: 238 RQQYETKLNTLKTNRQIVLEAL 259
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 267 LSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
L V I+ + + E EK KK++ ++ RR HNY F+ FL++LAE+ QL L+++
Sbjct: 597 LKNVETEIQICEQHLKDEIEKRKKYKVDDCRRTHNYDDFIRTFLRMLAEQGQLSKLVDQ 655
>sp|A2VDM8|BAP1_BOVIN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Bos taurus GN=BAP1
PE=2 SV=1
Length = 711
Score = 196 bits (497), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 163/267 (61%), Gaps = 26/267 (9%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKW----RPGEK 58
W +ESDPG+FT L++ VKGVQVEE+Y L PVYG IFLFKW R K
Sbjct: 5 WLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERRSRRK 61
Query: 59 -----DDRVVIKDP--NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTK 111
DD VI D N N+FFA Q+I N+CAT A+LS+LLNC ++D+GP LS++K+FTK
Sbjct: 62 VSTLVDDTSVIDDDIVN-NMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTK 120
Query: 112 NFPPELKGLAINNSDAIRAAHNSFARPEP-FVPEEQK--AAGKDDDVYHFISYIPVDGVL 168
F PE KG AI N+ + AHNS ARPEP +PE+Q +A + + +HF+SY+P+ G L
Sbjct: 121 GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYS---KSEIRFNLMAVIKNRK 225
+ELDGLK PI GP G+ D +W + VI ERI + K E R +++ V NR+
Sbjct: 181 FELDGLKVYPIDHGPW--GE-DEEWTDKARRVIMERIGLATAGIKYEARLHVLKV--NRQ 235
Query: 226 ELYTAELKEFQRKRERILQQLASLQSE 252
+ A + + + ++Q S +S+
Sbjct: 236 TVLEALQQLIRVTQPELIQTHKSQESQ 262
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 279 EKILMEE-EKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIEK 325
E L EE EK KK++ ++ RR HNY F+ F+ +LA++ L L+E+
Sbjct: 629 EACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQ 676
>sp|Q17N72|CALYP_AEDAE Ubiquitin carboxyl-terminal hydrolase calypso OS=Aedes aegypti
GN=calypso PE=3 SV=1
Length = 478
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 158/277 (57%), Gaps = 20/277 (7%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDR- 61
W +ESDPG+FT L++ VKGVQVEE+Y L N PVYG IFLF+W + R
Sbjct: 12 WLELESDPGLFTLLLEDFGVKGVQVEEIYDL---QKNIEGPVYGFIFLFRWIEERRARRK 68
Query: 62 ------VVIKDPNP--NLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKNF 113
+ +KD N+FFA QV+ N+CAT A+LS+LLNC DID+G LS+LK TK
Sbjct: 69 IVETTEIYVKDEEAVNNIFFAQQVVPNSCATHALLSVLLNCSDIDLGNTLSRLKVHTKGM 128
Query: 114 PPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVLY 169
PE KG AI N+ + AHNS A P+ ++ + G+ + +HF+S++P++G L+
Sbjct: 129 CPENKGWAIGNTPELACAHNSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFVPINGHLF 188
Query: 170 ELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVIKNRKELY 228
ELDGLK P+ GP + W + V+ +R+ + +IRFNLMAV+ +R+
Sbjct: 189 ELDGLKPFPMDHGPWGEKEA---WTDKFRRVMSDRLGISTGEQDIRFNLMAVVPDRRIAI 245
Query: 229 TAELKEFQRKRERILQQLASLQSERMVDKTSFEALNK 265
T +LK + + + L L + + S E ++K
Sbjct: 246 THKLKMLRTNQTIVSAALEKLLKSKRTESRSLETVDK 282
>sp|B3MIV9|CALYP_DROAN Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
ananassae GN=calypso PE=3 SV=1
Length = 470
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 192/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 43 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 95
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 96 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 155
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 156 KAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSF 215
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 216 VPINGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMTERLGIATGEQDIRFNLMAV 272
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSE-------------RMVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 273 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGEGGNGDPQRPDTPSTLLEPSAFTA 332
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ K++ + RR HNY F+ FL +LA + L
Sbjct: 333 RDLQSLLKNLDTEIAINEQHLADENDRRHKFKVDASRRTHNYDKFICTFLSMLAHQGVLG 392
Query: 321 PLIEK 325
L+ +
Sbjct: 393 ELVSQ 397
>sp|B4HST0|CALYP_DROSE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
sechellia GN=calypso PE=3 SV=1
Length = 471
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 191/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 45 GWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 97
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 98 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 157
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 158 KTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSF 217
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 218 VPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 274
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 275 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTA 334
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 335 RDLQSLLKNLDTEIAINEQHLTDENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 394
Query: 321 PLIEK 325
L+ +
Sbjct: 395 ELVSQ 399
>sp|B4P6P6|CALYP_DROYA Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba
GN=calypso PE=3 SV=1
Length = 471
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 191/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 45 GWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 97
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 98 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 157
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 158 KAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSF 217
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 218 VPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 274
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 275 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTA 334
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 335 RDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 394
Query: 321 PLIEK 325
L+ +
Sbjct: 395 ELVSQ 399
>sp|B4QHH0|CALYP_DROSI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
simulans GN=calypso PE=3 SV=1
Length = 471
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 191/364 (52%), Gaps = 51/364 (14%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEKD 59
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 46 WLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERRA 98
Query: 60 DR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKLK 107
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+LK
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 108 EFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISYI 162
TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S++
Sbjct: 159 THTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSFV 218
Query: 163 PVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAVI 221
P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV+
Sbjct: 219 PINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAVV 275
Query: 222 KNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA- 262
+R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 276 PDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTAR 335
Query: 263 -LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKP 321
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 336 DLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGE 395
Query: 322 LIEK 325
L+ +
Sbjct: 396 LVSQ 399
>sp|Q7K5N4|CALYP_DROME Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
melanogaster GN=calypso PE=1 SV=1
Length = 471
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 191/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 45 GWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 97
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 98 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 157
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 158 KTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSF 217
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 218 VPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 274
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 275 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTA 334
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 335 RDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 394
Query: 321 PLIEK 325
L+ +
Sbjct: 395 ELVSQ 399
>sp|B3NPV7|CALYP_DROER Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta
GN=calypso PE=3 SV=1
Length = 471
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 191/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 45 GWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 97
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 98 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 157
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDD-----DVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 158 KVHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVSSCRFTGEAFHFVSF 217
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 218 VPINGQLFELDGLKPYPMNHG---GWEDSEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 274
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 275 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTA 334
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 335 RDLQSLLKNLDTEIAINEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 394
Query: 321 PLIEK 325
L+ +
Sbjct: 395 ELVSQ 399
>sp|B4LQ24|CALYP_DROVI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila virilis
GN=calypso PE=3 SV=1
Length = 462
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 49/363 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 29 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 81
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 82 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRL 141
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 142 KAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSF 201
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G C + DW + V+ ER+ + +IRFNLMAV
Sbjct: 202 VPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 258
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-----------MVDKTSFEA-- 262
+ +R+ T +LK + + + LQ+L A Q ER +++ ++F A
Sbjct: 259 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGERDEQQRPDTPNTLLEPSAFTARD 318
Query: 263 LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPL 322
L L ++ I + + E ++ + ++ + RR HNY F+ FL +LA + L L
Sbjct: 319 LQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLTMLAHQGVLGEL 378
Query: 323 IEK 325
+ +
Sbjct: 379 VSQ 381
>sp|B4JW98|CALYP_DROGR Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
grimshawi GN=calypso PE=3 SV=1
Length = 462
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 192/363 (52%), Gaps = 49/363 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 29 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 81
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G L +L
Sbjct: 82 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLGRL 141
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 142 KAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSF 201
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G C + DW + V+ ER+ + +IRFNLMAV
Sbjct: 202 VPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 258
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-----------MVDKTSFEA-- 262
+ +R+ T +LK + + + LQ+L A Q ER +++ ++F A
Sbjct: 259 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGERDEQQRPDTPTTLLEPSAFTARD 318
Query: 263 LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPL 322
L L ++ I + + E ++ + ++ + RR HNY F+ FL +LA + L L
Sbjct: 319 LQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGEL 378
Query: 323 IEK 325
+ +
Sbjct: 379 VSQ 381
>sp|Q291J4|CALYP_DROPS Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
pseudoobscura pseudoobscura GN=calypso PE=3 SV=1
Length = 475
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 44 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 96
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 97 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 156
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 157 KVHTKGMSPENKGLAIGNTPELACAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSF 216
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P+ G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 217 VPISGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 273
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 274 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTA 333
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 334 KDLQLLLKNLDTEIAINEQNLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 393
Query: 321 PLIEK 325
L+ +
Sbjct: 394 ELVSQ 398
>sp|B4GAM2|CALYP_DROPE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
persimilis GN=calypso PE=3 SV=1
Length = 475
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 51/365 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 44 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 96
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 97 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRL 156
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 157 KVHTKGMSPENKGLAIGNTPELACAHNSHAIPQARRRLERTGAGVASCRFTGEAFHFVSF 216
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P+ G L+ELDGLK P++ G G + DW + V+ ER+ + +IRFNLMAV
Sbjct: 217 VPISGQLFELDGLKPYPMNHG---GWEDHEDWTDKFRRVMAERLGIATGEQDIRFNLMAV 273
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQL--ASLQSER-------------MVDKTSFEA 262
+ +R+ T +LK + + + LQ+L A Q E +++ ++F A
Sbjct: 274 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGESGNGDQQRPDTPTTLLEPSAFTA 333
Query: 263 --LNKSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLK 320
L L ++ I + + E ++ ++ + RR HNY F+ FL +LA + L
Sbjct: 334 KDLQLLLKNLDTEIAINEQNLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLG 393
Query: 321 PLIEK 325
L+ +
Sbjct: 394 ELVSQ 398
>sp|B4KT51|CALYP_DROMO Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
mojavensis GN=calypso PE=3 SV=1
Length = 461
Score = 178 bits (451), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 190/361 (52%), Gaps = 47/361 (13%)
Query: 2 SWCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPV---YGLIFLFKWRPGEK 58
W +ESDPG+FT L++ VQVEE+Y L +P+ YG IFLF+W +
Sbjct: 29 GWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ-------KPIESPYGFIFLFRWIEERR 81
Query: 59 DDR--------VVIKDPNP--NLFFASQVINNACATQAILSILLNCP--DIDIGPELSKL 106
R + +KD ++FFA QV+ N+CAT A+LS+LLNC ++ +G LS+L
Sbjct: 82 ARRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRL 141
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGK-----DDDVYHFISY 161
K TK PE KGLAI N+ + AHNS A P+ E+ AG + +HF+S+
Sbjct: 142 KAHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGAGVASCRFTGEAFHFVSF 201
Query: 162 IPVDGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIE-RYSKSEIRFNLMAV 220
+P++G L+ELDGLK P++ G C + DW + V+ +R+ + +IRFNLMAV
Sbjct: 202 VPINGQLFELDGLKPYPMNHG-CW--EEHEDWTDKFRRVMADRLGIATGEQDIRFNLMAV 258
Query: 221 IKNRKELYTAELKEFQRKRERI---LQQLASLQSE-----------RMVDKTSFEA--LN 264
+ +R+ T +LK + + + LQ+L + +++ ++F A L
Sbjct: 259 VPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGDDQQRPDTPNTLLEPSAFTARDLQ 318
Query: 265 KSLSEVNAGIEGATEKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLIE 324
L ++ I + + E ++ + ++ + RR HNY F+ FL +LA + L L+
Sbjct: 319 SLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVS 378
Query: 325 K 325
+
Sbjct: 379 Q 379
>sp|B0W2R4|CALYP_CULQU Ubiquitin carboxyl-terminal hydrolase calypso OS=Culex
quinquefasciatus GN=calypso PE=3 SV=1
Length = 470
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 191/409 (46%), Gaps = 94/409 (22%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGEKDDRV 62
W +ESDPG+FT L++ VKGVQVEE+Y L ++ PV+G IFLF+W + R
Sbjct: 12 WLELESDPGLFTLLLEDFGVKGVQVEEIYDLQ-KTIEG--PVFGFIFLFRWIEERRARRK 68
Query: 63 VIKDPNP----------NLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEFTKN 112
+++ ++FFA QV+ N+CAT A+LS+LLNC DID+G LS+LK TK
Sbjct: 69 IVETTTEMYVKDEEAVNSIFFAHQVVPNSCATHALLSVLLNCSDIDLGTTLSRLKVHTKG 128
Query: 113 FPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAA---GK-DDDVYHFISYIPVDGVL 168
P+ KG AI N+ + AHNS A P+ ++ + G+ + +HF+S+ P++G L
Sbjct: 129 MCPDNKGWAIGNTPELACAHNSHAMPQARRRMDRNSGVSTGRFTGEAFHFVSFCPINGHL 188
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQER------------------------ 204
+ELDGLK P+ GP G+ + DW + V+ +R
Sbjct: 189 FELDGLKPFPMDHGPW--GEKE-DWTDKFRRVMSDRLGISTDRRIAITHKLKMLRTNQTI 245
Query: 205 -------------IERYSKSEIRFNLMAVIKNRKELYT------AELKEFQRKRE----- 240
+E S++EIR + + K +E ++L E K E
Sbjct: 246 VSAALEKLLKSKQLESRSQAEIRETVDKIKKEEQESTVKLSSEYSQLLEMHEKDEPAVAM 305
Query: 241 -RILQQLASLQSE----RMVDKTSFEALNKSLSEVNAGIEGAT----------------- 278
+ L+ L SL S ++ +T + N S A I T
Sbjct: 306 SKELESLVSLNSSSDSVEIIGETEIKKENPPPSPPPAFIGAGTFSPKDLLSLLKNLESEI 365
Query: 279 ----EKILMEEEKFKKWRTENIRRKHNYIPFLFNFLKILAEKKQLKPLI 323
+ + E EK ++ ++ RR HNY F+ FL +LA + +L L+
Sbjct: 366 NITEQHLCDENEKRAMFKVDDCRRTHNYDEFICTFLSMLAYQGELGDLV 414
>sp|P35122|UCHL_DROME Ubiquitin carboxyl-terminal hydrolase OS=Drosophila melanogaster
GN=Uch PE=2 SV=2
Length = 227
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 25/233 (10%)
Query: 1 MSWCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF------- 51
++W +ES+P V T+ I ++ V V ++ L+ D+L + RPV I LF
Sbjct: 2 LTWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYE 61
Query: 52 KWRPGEKDDRVVIKDPNP-NLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF- 109
K R E D +++ +P +LF+ Q +NAC T A++ + N ++DI + LK+F
Sbjct: 62 KHRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKEVDI--DRGVLKDFL 119
Query: 110 --TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGV 167
T + PE +G A+ + A H + A+ + AA + ++HFI+ + +G
Sbjct: 120 EKTASLSPEERGRALEKDEKFTADHEALAQEG-----QTNAANHEKVIHHFIALVNKEGT 174
Query: 168 LYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
LYELDG K PI GP + + +++ V +E + R +E+RF ++A+
Sbjct: 175 LYELDGRKSFPIKHGPTS----EETFVKDAAKVCKEFMAR-DPNEVRFTVLAL 222
>sp|Q2TBG8|UCHL3_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y +D + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
++ IK D +++F Q I+NAC T ++ + N D + G L K E
Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEE 125
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
+ + PE + + N DAIR H + A + +A D+ V HFI+ + VDG L
Sbjct: 126 SASMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
YELDG K PI+ G + D L+ V ++ +ER E+RFN +A+
Sbjct: 181 YELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|P15374|UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens
GN=UCHL3 PE=1 SV=1
Length = 230
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y +D + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
++ IK D +++F Q I+NAC T ++ + N D + G L K E
Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEE 125
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
+ + PE + + N DAIR H + A + +A D+ V HFI+ + VDG L
Sbjct: 126 SVSMSPEERARYLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
YELDG K PI+ G + D L+ V ++ +ER E+RFN +A+
Sbjct: 181 YELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q9JKB1|UCHL3_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus
GN=Uchl3 PE=1 SV=2
Length = 230
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y ++ + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
++ IK D +++F Q I+NAC T ++ + N D + G L K E
Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEE 125
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
+ + PE + + N DAIR H + A + +A D+ V HFI+ + VDG L
Sbjct: 126 SVSMSPEERAKFLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
YELDG K PI+ G + D L+ V ++ +ER E+RFN +A+
Sbjct: 181 YELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q91Y78|UCHL3_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus
norvegicus GN=Uchl3 PE=1 SV=1
Length = 230
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 114/232 (49%), Gaps = 24/232 (10%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y ++ + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
++ IK D +++F Q I+NAC T ++ + N D + G L K E
Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEE 125
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
+ PE + + N DAIR H + A + +A D+ V HFI+ + VDG L
Sbjct: 126 SVAMSPEERARHLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVDGHL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
YELDG K PI+ G + D L+ V ++ +ER E+RFN +A+
Sbjct: 181 YELDGRKPFPINHGKTS----DETLLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|P58321|UCHL4_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus
GN=Uchl4 PE=1 SV=1
Length = 233
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 27/235 (11%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y ++ + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD------IDIGPELSKL 106
++ IK D +++F Q I+NAC T + ++ + + G L K
Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKF 125
Query: 107 KEFTKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVD 165
E + + PE + + N DAIR H + A + +A D+ V HFI+ + VD
Sbjct: 126 LEESVSMSPEERAKYLENYDAIRVTHETSAHEG-----QTEAPSIDEKVDLHFIALVHVD 180
Query: 166 GVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
G LYELDG K PI+ G + D L+ V V ++ +ER E+RFN +A+
Sbjct: 181 GHLYELDGWKPFPINHGKTS----DETLLEDVIKVCKKFMER-DPDELRFNAIAL 230
>sp|Q06AB3|UCHL3_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 24/232 (10%)
Query: 3 WCTIESDPGVFTELIQQMQVK-GVQVEELYSLDLDSLNNL-RPVYGLIFLF----KWRPG 56
W +E++P V + ++Q+ + Q ++Y +D + L+ + RPV ++ LF K+
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 57 EKDDRVVIK----DPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEF 109
++ IK D P+++F Q I+NAC T ++ + N + + G L K E
Sbjct: 66 RTEEEEKIKSQGQDVTPSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKFLEE 125
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
+ + P+ + + + DAI H + A + +A D+ V HFI+ + VDG L
Sbjct: 126 SASMSPDERARYLESYDAIPVTHETSAHEG-----QTEAPNIDEKVDLHFIALVHVDGHL 180
Query: 169 YELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAV 220
YELDG K PI+ G + D L+ V ++ +ER E+RFN +A+
Sbjct: 181 YELDGRKPFPINHGETS----DETLLEDAIEVCKKFMER-DPDELRFNAIAL 227
>sp|Q54T48|UCHL_DICDI Probable ubiquitin carboxyl-terminal hydrolase OS=Dictyostelium
discoideum GN=uch1 PE=3 SV=1
Length = 255
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 2 SWCTIESDPGVFTELIQQMQV-KGVQVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKD 59
+W +E++P V T +Q + V K + ++Y +D L + P +I LF +D
Sbjct: 13 NWIPLEANPEVLTTFMQSLGVSKDWEFCDIYGIDEGLLEMVPSPCVAVILLFPITNEYED 72
Query: 60 DRVVIKDP--------NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF-- 109
R ++ + ++F Q I NAC T ++ +LN ++ E K+F
Sbjct: 73 KRYKLEKEIEEKGQVLSDKVYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLD 132
Query: 110 -TKNFPPELKGLAINNSDAIRAAHN-SFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGV 167
T + E + +++ + I +H S + + VP+E + V HF+S++ VDG
Sbjct: 133 KTTSLSTEERAISLLKNSEIEKSHEISALQGQSNVPQEDEPV-----VLHFVSFVHVDGH 187
Query: 168 LYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVI 221
LYELDG K I+ G + D ++Q +I E EIRFNLM ++
Sbjct: 188 LYELDGRKPFAINHGESSAETLLKDTANVLQKMIDE-----DPKEIRFNLMGLV 236
>sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Macaca
fascicularis GN=UCHL1 PE=2 SV=1
Length = 223
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ DSL ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLSRLGVAGQWRFVDVLGLEEDSLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH++ V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + G LQ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVNHGASSEGT----LLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|Q00981|UCHL1_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus
norvegicus GN=Uchl1 PE=1 SV=2
Length = 223
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ ++L ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLAKLGVAGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH+S V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDS-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + LQ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVN----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|Q9R0P9|UCHL1_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus
GN=Uchl1 PE=1 SV=1
Length = 223
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ ++L ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLAKLGVAGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH+S V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDS-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + LQ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVN----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|Q6SEG5|UCHL1_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Sus scrofa
GN=UCHL1 PE=2 SV=1
Length = 223
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ +SL ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLTRLGVAGHWRFADVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH++ V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + LQ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVN----HGASSEDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|O01391|UCHL_APLCA Ubiquitin carboxyl-terminal hydrolase OS=Aplysia californica GN=UCH
PE=2 SV=1
Length = 214
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 3 WCTIESDPGVFTELIQQMQV-KGVQVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDD 60
W +ES+P V + + + + G +++ LD + L + RP L+ LF DD
Sbjct: 7 WIPLESNPKVLNKYVHNLGMDAGWNFVDVFGLDPELLAMVPRPAAALVLLFP------DD 60
Query: 61 RVVI--------KDPNPNLFFASQVINNACATQAILSILLNCPDI---DIGPELSKLKEF 109
+ + D +L++ Q I NAC T AI+ L N ++ D E
Sbjct: 61 KETVNQLIGEYQSDYPDSLYYTKQTIGNACGTVAIVHALANNENVIPFDAAKHFKTFLEK 120
Query: 110 TKNFPPELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV-YHFISYIPVDGVL 168
TK PE + + + + AAH A+ + +A +D+ V HF++ + +G L
Sbjct: 121 TKPLNPEERAKHLEQDNLMGAAHGDCAQEG-----DTQAPSQDEHVKSHFVALVHCNGTL 175
Query: 169 YELDGLKEGPISLGPCTG 186
YELDG KE P+ G +
Sbjct: 176 YELDGRKEAPVVHGTTSA 193
>sp|P09936|UCHL1_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Homo sapiens
GN=UCHL1 PE=1 SV=2
Length = 223
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ +SL ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSETEKMS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH++ V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + L+ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVN----HGASSEDTLLKDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|P50103|UCHL1_MONDO Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Monodelphis
domestica GN=UCHL1 PE=3 SV=2
Length = 223
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ D L + P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLTRLGVGGDWKFVDVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPD---IDIGPELSKLKEFTKNFP 114
+ ++ +P ++F Q + N+C T ++ + N D D G L + T
Sbjct: 66 QIEELKGQEVSPKVYFMKQTVGNSCGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH++ V +E + D+ +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDEVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
PI+ G D L+ + ++ ER + E+RF+ +A+ K
Sbjct: 179 MPFPIN----HGSNSDESVLKGAAEICRQFTER-EEGEVRFSAVALCK 221
>sp|Q9GM50|UCHL1_HORSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus
GN=UCHL1 PE=2 SV=2
Length = 223
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 6 IESDPGVFTELIQQMQVKGV-QVEELYSLDLDSLNNL-RPVYGLIFLFKWRPGEKDDR-- 61
+E +P + +++ ++ V G + ++ L+ ++L ++ P L+ LF ++ R
Sbjct: 6 MEINPEMLNKVLARLGVAGQWRFVDVLGLEEETLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 62 ----VVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFP 114
+ ++ +P ++F Q I N+C T ++ + N D + S LK+F T+
Sbjct: 66 QIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLS 125
Query: 115 PELKGLAINNSDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGL 174
PE + ++AI+AAH++ V +E + D +HFI + VDG LYELDG
Sbjct: 126 PEDRAKCFEKNEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGR 178
Query: 175 KEGPISLGPCTGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
P++ G + LQ V +E ER + E+RF+ +A+ K
Sbjct: 179 MPFPVN----HGASSEDLLLQDAAKVCREFTER-EQGEVRFSAVALCK 221
>sp|P23356|UCHL1_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Bos taurus
GN=UCHL1 PE=1 SV=2
Length = 252
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 68 NPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKEF---TKNFPPELKGLAINN 124
+P ++F Q I N+C T ++ + N D + S LK+F T+ PE +
Sbjct: 105 SPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEK 164
Query: 125 SDAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPC 184
++AI+AAH++ V +E + D +HFI + VDG LYELDG P++ G
Sbjct: 165 NEAIQAAHDA-------VAQEGQCRVDDKVNFHFILFNNVDGHLYELDGRMPFPVNHGTS 217
Query: 185 TGGQGDMDWLQMVQPVIQERIERYSKSEIRFNLMAVIK 222
+ + LQ V +E ER + E+RF+ +A+ K
Sbjct: 218 S----EDSLLQDAAKVCREFTER-EQGEVRFSAVALCK 250
>sp|Q10171|UBLH1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=uch1 PE=3 SV=1
Length = 222
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 3 WCTIESDPGVFTELIQQMQVKGVQVEELYSLDLDSLNNLRPVYGLIFLFKWRPGE---KD 59
W +E+ P V +Q++ V+ V +L+SL+ RPV+ L+F+F + K
Sbjct: 2 WRPLENTPEVLEPYLQKIGVQDASVFDLFSLEEIPEYIPRPVHALLFVFPSSGTKTIYKG 61
Query: 60 DRVVIKDPNPNLFFASQVINNACATQAILSILLNCPDIDIGPELSKLKE--FTKNFPPEL 117
R++ KD + L++ Q I NAC T +L + N G K+ E F K+
Sbjct: 62 SRILPKDSDKVLWYP-QTIPNACGTIGLLHAVSN------GELRRKVNENDFIKSLIRTA 114
Query: 118 KGLAIN-------NSDAIRAAHNSFARPEPFVPEEQKAAGKDDDV---YHFISYIPV--- 164
+G +I +S + A H +FA P P + G ++DV HFI ++
Sbjct: 115 EGSSIEERAKLIEDSKELEALHAAFAGP-PL-----EVEGSEEDVETDLHFICFVKGKSK 168
Query: 165 -DGVLYELDGLKEGPISLGPCTGGQGDMDWLQMVQPVIQ 202
D YELDG +EGP+ + + L +++ IQ
Sbjct: 169 DDNHFYELDGRQEGPVQHSEIESDLLNAEVLSVIKNYIQ 207
>sp|P35127|UBL1_YEAST Ubiquitin carboxyl-terminal hydrolase YUH1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YUH1 PE=1
SV=1
Length = 236
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 19/213 (8%)
Query: 6 IESDPGVFTELIQQMQVKGVQVE-ELYSLDLDSLNNL--RPVYGLIFLFKWRPGEKDDRV 62
IES+P VFT ++ +K ++YSL L RPV ++ LF K
Sbjct: 11 IESNPEVFTNFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFPINEDRKSSTS 70
Query: 63 VIKDPNPNLFFASQVINNACATQAILSILLNCPDI-DIGPELSKLKEFTKNFPPELKGLA 121
+ ++ + Q + NAC AIL L N + + G +L + +
Sbjct: 71 QQITSSYDVIWFKQSVKNACGLYAILHSLSNNQSLLEPGSDLDNFLKSQSDTSSSKNRFD 130
Query: 122 INNSD-----AIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYIPVDGVLYELDGLK- 175
+D I+ +F+ + PE D H+I+Y+ +G ++ELDG
Sbjct: 131 DVTTDQFVLNVIKENVQTFSTGQSEAPEATA-----DTNLHYITYVEENGGIFELDGRNL 185
Query: 176 EGPISLGPCTGGQGDMDWLQMVQPVIQERIERY 208
GP+ LG D+ + Q +++ R+ Y
Sbjct: 186 SGPLYLGKSDPTATDL----IEQELVRVRVASY 214
>sp|A5WFW1|SYA_PSYWF Alanine--tRNA ligase OS=Psychrobacter sp. (strain PRwf-1) GN=alaS
PE=3 SV=1
Length = 903
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 221 IKNRKELYTAELKEFQRKRERILQQLASLQSERMVDKTSFEALNKSLSEVNAGIEGATEK 280
+ +R + + +E +++ ER+ Q++AS Q+ +VD A K L AGI+G +
Sbjct: 755 VADRVQTMADKQRELEKQIERLNQKIASAQAATLVDNVQTIADKKVLIAQVAGIDGKAMR 814
Query: 281 ILMEEEKFK 289
L+++ K K
Sbjct: 815 GLIDDIKSK 823
>sp|B3CV54|RPOC_ORITI DNA-directed RNA polymerase subunit beta' OS=Orientia tsutsugamushi
(strain Ikeda) GN=rpoC PE=3 SV=1
Length = 1396
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 212 EIRFNLMAVIKNRKELYTAELKEFQRKRERILQQL--ASLQSERMVDKTSFEALNKSLSE 269
E + N AVI K+L L+E Q + ILQ + ASLQ+E + SF+ + L+E
Sbjct: 1279 EEKVNKRAVINTNKKLKAKGLREAQYRP--ILQGITKASLQTESFISAASFQETTRVLTE 1336
Query: 270 VNAGIEGATEKI 281
A I G +K+
Sbjct: 1337 --AAIAGKVDKL 1346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,081,174
Number of Sequences: 539616
Number of extensions: 5258478
Number of successful extensions: 17045
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 16765
Number of HSP's gapped (non-prelim): 206
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)