BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019913
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDE 355
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 355
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 98 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 149
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 150 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 202
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 203 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 246
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 247 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 306
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 307 SYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDE 355
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 146/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE+T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 146/300 (48%), Gaps = 45/300 (15%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 101 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 152
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 153 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRTNPDDPAYD------- 205
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVDM 183
+R+FQ D+K++ND +D +I + K + +++D L +D
Sbjct: 206 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPET------------- 251
Query: 184 RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPT 243
G +DD +R ++T LIAGHETT+ +L++ ++ L +NP ++KA E VL P+
Sbjct: 252 -GEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDPVPS 310
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
++ +K+L+Y+ +++ E+LRL+P P K D + GG YP+ G +I + +
Sbjct: 311 YKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGE------YPLEKGDEIMVLI 363
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LI GHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
W + ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWCKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T LIAGHETT+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP +++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP +++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+ + +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 244
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 245 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 304
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 305 SYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 353
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 144/289 (49%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------HIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY F S ++ P I ++ L EA + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYD------- 199
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR-- 184
+R+FQ D+K++ND +D +I + K + +++D LL +++ +
Sbjct: 200 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------------DLLTHMLNGKDP 243
Query: 185 --GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD +R ++T L AGHE T+ +L++A++ L +NP ++KA E VL P
Sbjct: 244 ETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 45/300 (15%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ R ++ P ++ M D + + + K+E+L E +++ + +
Sbjct: 96 NWKKARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDE--------HIEVPEDMT 147
Query: 72 SLALDIIGLGVFNYDFGSVTKESP--VIKAVYGTLFEAEH---RSTFYIPYWKIPLARWI 126
L LD IGL FNY S ++ P I ++ L E + R+ P +
Sbjct: 148 RLTLDTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYD------- 200
Query: 127 VPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVDM 183
+R+FQ D+K++ND +D +I + K + +++D L +D
Sbjct: 201 -ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPET------------- 246
Query: 184 RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPT 243
G +DD +R ++T LIAGHETT+ +LT+A++ L +NP ++KA E VL P+
Sbjct: 247 -GEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPS 305
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
++ +K+L+Y+ +++ E+LR++P P K D + GG YP+ G ++ + +
Sbjct: 306 YKQVKQLKYVGMVLNEALRIWPTAPAF-SLYAKEDTMLGGE------YPLEKGDELMVLI 358
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 43/289 (14%)
Query: 12 TWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLEAEFS 71
WK+ ++ P F ++ M D + + + K+E+L E +++ + +
Sbjct: 95 NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADE--------YIEVPEDMT 146
Query: 72 SLALDIIGLGVFNYDFGSVTKESP------VIKAVYGTLFEAEHRSTFYIPYWKIPLARW 125
L LD IGL FNY F S ++ P +I+A+ + + + R+ P +
Sbjct: 147 RLTLDTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQ-RANPDDPAYD------ 199
Query: 126 IVPRQRKFQNDLKIINDCLDGLIRNAKETRQETD---VEKLQSRDYSNLKDASLLRFLVD 182
+R+FQ D+K++ND +D +I + K + +++D + L +D
Sbjct: 200 --ENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPET------------ 245
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP 242
G +DD + ++T LIAGHETT+ +L++A++ L +NP ++K E VL P
Sbjct: 246 --GEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVP 303
Query: 243 TFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGY---RGDK 288
+++ +K+L+Y+ +++ E+LRL+P P + VL G Y +GD+
Sbjct: 304 SYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 32/304 (10%)
Query: 2 GKGLIP-ADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGN 60
G+GL+ + + W ++RRVI F L +++ F + K E+L+E +++
Sbjct: 74 GQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNE-------KAEQLVEILEAKADG 126
Query: 61 SIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKI 120
+ ++ + A+DI+ F + + + + E I +
Sbjct: 127 QTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEG-------ITASRN 179
Query: 121 PLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
LA+++ P +RK +++ L + R+ + R+E + A +L +
Sbjct: 180 TLAKFL-PGKRKQLREVRESIRFLRQVGRDWVQRRRE-------ALKRGEEVPADILTQI 231
Query: 181 VDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQK 240
+ DD L D+ +T IAGHET+A L + V L++ P V + QAEVD V+G K
Sbjct: 232 LKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK 291
Query: 241 K-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDI 299
+ FE L +L+Y+ ++ ESLRLYP P R ++ + L G R VP T +
Sbjct: 292 RYLDFEDLGRLQYLSQVLKESLRLYP-PAWGTFRLLEEETLIDGVR-------VPGNTPL 343
Query: 300 FLSV 303
S
Sbjct: 344 LFST 347
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 148/309 (47%), Gaps = 48/309 (15%)
Query: 8 ADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLE 67
A+ + WK+ R +++P F + L+ MV + A + + + E E + + L+
Sbjct: 99 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK-----PVTLK 151
Query: 68 AEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW-KIPLARW 125
F + ++D+I F + S+ + P ++ L R F P++ I + +
Sbjct: 152 DVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLSITVFPF 206
Query: 126 IVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
++P L+++N C+ +R + + +E+ +E Q L+ +
Sbjct: 207 LIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------VDFLQLM 253
Query: 181 VDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEV 233
+D + + + D +L + + AG+ETT++VL++ ++ LA +P +K Q E+
Sbjct: 254 IDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEI 313
Query: 234 DSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYP 292
D+VL K PT++++ ++EY+ ++V E+LRL+P + + R K DV + +G
Sbjct: 314 DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI-AMRLERVCKKDV-------EINGMF 365
Query: 293 VPAGTDIFL 301
+P G + +
Sbjct: 366 IPKGVVVMI 374
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 148/309 (47%), Gaps = 48/309 (15%)
Query: 8 ADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLE 67
A+ + WK+ R +++P F + L+ MV + A + + + E E + + L+
Sbjct: 101 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK-----PVTLK 153
Query: 68 AEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW-KIPLARW 125
F + ++D+I F + S+ + P ++ L R F P++ I + +
Sbjct: 154 DVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLSITVFPF 208
Query: 126 IVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
++P L+++N C+ +R + + +E+ +E Q L+ +
Sbjct: 209 LIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------VDFLQLM 255
Query: 181 VDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEV 233
+D + + + D +L + + AG+ETT++VL++ ++ LA +P +K Q E+
Sbjct: 256 IDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEI 315
Query: 234 DSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYP 292
D+VL K PT++++ ++EY+ ++V E+LRL+P + + R K DV + +G
Sbjct: 316 DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI-AMRLERVCKKDV-------EINGMF 367
Query: 293 VPAGTDIFL 301
+P G + +
Sbjct: 368 IPKGVVVMI 376
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 148/309 (47%), Gaps = 48/309 (15%)
Query: 8 ADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNSIELDLE 67
A+ + WK+ R +++P F + L+ MV + A + + + E E + + L+
Sbjct: 100 AEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRR--EAETGK-----PVTLK 152
Query: 68 AEFSSLALDIIGLGVFNYDFGSVTK-ESPVIKAVYGTLFEAEHRSTFYIPYW-KIPLARW 125
F + ++D+I F + S+ + P ++ L R F P++ I + +
Sbjct: 153 DVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL-----RFDFLDPFFLSITVFPF 207
Query: 126 IVPRQRKFQNDLKIINDCL-----DGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
++P L+++N C+ +R + + +E+ +E Q L+ +
Sbjct: 208 LIPI-------LEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHR------VDFLQLM 254
Query: 181 VDMRGAD-------VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEV 233
+D + + + D +L + + AG+ETT++VL++ ++ LA +P +K Q E+
Sbjct: 255 IDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEI 314
Query: 234 DSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYP 292
D+VL K PT++++ ++EY+ ++V E+LRL+P + + R K DV + +G
Sbjct: 315 DAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPI-AMRLERVCKKDV-------EINGMF 366
Query: 293 VPAGTDIFL 301
+P G + +
Sbjct: 367 IPKGVVVMI 375
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 121 PLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFL 180
PL R +P R+F + L ++ +D +I + + Q+ D LL L
Sbjct: 204 PLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPD---------------DLLTAL 248
Query: 181 VDMR---GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVL 237
++ + G + ++++ D ++ +L G ET A+ + W + LA +P + + EV++V
Sbjct: 249 LEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVT 308
Query: 238 GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGT 297
G + FE ++KL + ++ E++RL P +L RR + L GGYR +PAG
Sbjct: 309 GGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GGYR-------IPAGA 360
Query: 298 DIFLS 302
DI S
Sbjct: 361 DIIYS 365
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 131 RKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDD 190
+K++ +K + D ++ LI A++ R+ + EKL+ D + L + RG D+
Sbjct: 242 KKYEKSVKDLKDAIEVLI--AEKRRRISTEEKLEE-----CMDFATELILAEKRG-DLTR 293
Query: 191 RQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL 250
+ ++ MLIA +T + L + +FL+A++P+ + E+ +V+G++ + ++KL
Sbjct: 294 ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKL 353
Query: 251 EYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSSY 307
+ + + ES+R P L++R+ ++ DV+ DGYPV GT+I L++ +
Sbjct: 354 KVMENFIYESMRYQPVVDLVMRKALEDDVI--------DGYPVKKGTNIILNIGRMH 402
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 56/322 (17%)
Query: 3 KGLIPADLDT-WKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDS----- 56
KG+ AD W+ RR+ F +F D + K EK++ E S
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATF---------ALFKDGDQ----KLEKIICQEISTLCDM 138
Query: 57 ---RGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTF 113
G SI++ F ++ ++I L FN + + E VI+ + + + +
Sbjct: 139 LATHNGQSIDISFPV-FVAVT-NVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSL 196
Query: 114 Y--IPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNL 171
+P+ KI + + K ++ +KI ND L+ ++ N KE K +S +N+
Sbjct: 197 VDLVPWLKIFPNKTL----EKLKSHVKIRNDLLNKILENYKE--------KFRSDSITNM 244
Query: 172 KDASLLRFLVDM----RGADVDDRQLRDDLMTMLI-----AGHETTAAVLTWAVFLLAQN 222
D +L++ ++ G D D L D+ + I AG ETT +V+ W + L N
Sbjct: 245 LD-TLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHN 303
Query: 223 PSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLP 281
P KK E+D +G + PT +L + + E LRL P P+LI D
Sbjct: 304 PQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI 363
Query: 282 GGYRGDKDGYPVPAGTDIFLSV 303
G + DK GT++ +++
Sbjct: 364 GEFAVDK-------GTEVIINL 378
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 179 FLVDMRGAD-VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVL 237
FL D+ D + ++L + + +A ETTA L W ++ L++NP ++ EV SVL
Sbjct: 269 FLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL 328
Query: 238 -GQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAG 296
+ P E L+ + Y++ + ES+RL P P R KP VL G+ Y +P G
Sbjct: 329 PDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL-----GE---YALPKG 380
Query: 297 TDIFLSVS 304
T + L+
Sbjct: 381 TVLTLNTQ 388
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 29/254 (11%)
Query: 64 LDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLA 123
+ ++ EFS L II F KE ++ A + + + +W I +
Sbjct: 159 VTIQKEFSLLTCSIICYLTFG------NKEDTLVHAFHDCVQDLMKTWD----HWSIQIL 208
Query: 124 RWIVPRQRKFQND----LKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRF 179
+VP R F N LK + D ++ +E+ V Q RD ++ + R
Sbjct: 209 D-MVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAG-QWRDMTDYMLQGVGRQ 266
Query: 180 LVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ 239
V+ + + + ++ + I G ETTA+ L+WAV L +P ++ Q E+D LG
Sbjct: 267 RVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGP 326
Query: 240 ----KKPTFESLKKLEYIRLIVAESLRLYPQPPL-LIRRTIKPDVLPGGYRGDKDGYPVP 294
+ T++ +L + +AE LRL P PL L RT +P + GY +P
Sbjct: 327 GASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSI--------FGYDIP 378
Query: 295 AGTDIFLSVSSSYI 308
G + ++ +++
Sbjct: 379 EGMVVIPNLQGAHL 392
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVA 258
++IAG ETT VL WA+ +A P+ + Q E+D ++G KP+++ K+ Y ++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSSYI 308
E LR PL I D + GY +P GT + ++ S +
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAV-------VRGYSIPKGTTVITNLYSVHF 383
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVA 258
++IAG ETT VL WA+ +A P+ + Q E+D ++G KP+++ K+ Y ++
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEAVLH 340
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSSYI 308
E LR PL I D + GY +P GT + ++ S +
Sbjct: 341 EVLRFCNIVPLGIFHATSEDAV-------VRGYSIPKGTTVITNLYSVHF 383
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 27/185 (14%)
Query: 128 PRQRKFQNDLKIINDCLDGL---IRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR 184
P+Q+ FQ CL GL I E Q T ++ RD+ D+ L+R + +
Sbjct: 211 PQQQAFQ--------CLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEK 258
Query: 185 GADVDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-K 240
+ + L++ +MT L I G ET + L + LL ++P K E+D V+G+ +
Sbjct: 259 NPNTE-FYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNR 317
Query: 241 KPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
+P FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++
Sbjct: 318 QPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFR----DFFLPKGTEVY 370
Query: 301 LSVSS 305
+ S
Sbjct: 371 PMLGS 375
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 179 FLVDMRGA------DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAE 232
FL +M A +D LR + + AG TT+ L W + L+ +P ++ Q E
Sbjct: 253 FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQE 312
Query: 233 VDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGY 291
+D V+GQ ++P + Y ++ E R PL + D+ G+R
Sbjct: 313 IDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR------ 366
Query: 292 PVPAGTDIFLSVSS 305
+P GT + ++SS
Sbjct: 367 -IPKGTTLITNLSS 379
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L I G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFR----DFFLPKGTEVYPML 373
Query: 304 SS 305
S
Sbjct: 374 GS 375
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L I G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFR----DFFLPKGTEVYPML 373
Query: 304 SS 305
S
Sbjct: 374 GS 375
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 179 FLVDMRGA------DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAE 232
FL +M A +D LR + + AG TT+ L W + L+ +P ++ Q E
Sbjct: 253 FLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQE 312
Query: 233 VDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGY 291
+D V+GQ ++P + Y ++ E R PL + D+ G+R
Sbjct: 313 IDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFR------ 366
Query: 292 PVPAGTDIFLSVSS 305
+P GT + ++SS
Sbjct: 367 -IPKGTTLITNLSS 379
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L AG ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDT---KFR----DFFLPKGTEVYPML 373
Query: 304 SS 305
S
Sbjct: 374 GS 375
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRAT-----LDPSNPRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSS 306
K+ Y ++ E RL P + T+ D +R GY +P T++F +SS+
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRAT-----LDPSNPRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSS 306
K+ Y ++ E RL P + T+ D +R GY +P T++F +SS+
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 128 PRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGAD 187
P+Q+ FQ + L+ I E Q T ++ RD+ D+ L+R + + +
Sbjct: 211 PQQQAFQ-----LLQGLEDFIAKKVEHNQRT-LDPNSPRDFI---DSFLIRMQEEEKNPN 261
Query: 188 VDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPT 243
+ L++ +MT L + G ET + L + LL ++P K E+D V+G+ ++P
Sbjct: 262 TE-FYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
FE K+ Y+ ++ E R P+ + R +K D +R + +P GT+++ +
Sbjct: 321 FEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT---KFR----DFFLPKGTEVYPML 373
Query: 304 SS 305
S
Sbjct: 374 GS 375
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRAT-----LDPSNPRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSS 306
K+ Y ++ E RL P + T+ D +R GY +P T++F +SS+
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRAT-----LDPSNPRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSS 306
K+ Y ++ E RL P + T+ D +R GY +P T++F +SS+
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 18/180 (10%)
Query: 130 QRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMR--GAD 187
R+ +L+ IN + + + T ++ RD+ D LLR D ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRAT-----LDPSNPRDFI---DVYLLRMEKDKSDPSSE 263
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFES 246
+ L ++++ AG ETT+ L + L+ + P ++ Q E++ V+G + P +
Sbjct: 264 FHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDD 323
Query: 247 LKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSS 306
K+ Y ++ E RL P + T+ D +R GY +P T++F +SS+
Sbjct: 324 RAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT---QFR----GYVIPKNTEVFPVLSSA 376
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 36/261 (13%)
Query: 57 RGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKES-PVIKAVYGTL-FEAEHRSTFY 114
RG + +D S ++I VF F KE +++ + G+ F A Y
Sbjct: 139 RGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY 198
Query: 115 IPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDA 174
+ + + P+Q+ F+ +L+ + D + + + + T ++ RD+ D+
Sbjct: 199 EMFSSV-MKHLPGPQQQAFK-ELQGLEDFIAKKVEHNQRT-----LDPNSPRDFI---DS 248
Query: 175 SLLRFLVDMRGADVDDRQLRDDLMTML---IAGHETTAAVLTWAVFLLAQNPSKVKKAQA 231
L+R + + + + L++ +MT L AG ET + L + LL ++P K
Sbjct: 249 FLIRMQEEEKNPNTE-FYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHE 307
Query: 232 EVDSVLGQ-KKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGG--YRGDK 288
E+D V+G+ ++P FE K+ Y ++ E R D+LP G +R +K
Sbjct: 308 EIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRF-------------GDMLPMGLAHRVNK 354
Query: 289 DG----YPVPAGTDIFLSVSS 305
D + +P GT++F + S
Sbjct: 355 DTKFRDFFLPKGTEVFPMLGS 375
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 32/164 (19%)
Query: 140 INDCLDGLIRNAKETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMT 199
I D D LI + +E ++L L D ++ ++D+ GA
Sbjct: 251 IRDITDSLIEHCQE-------KQLDENANVQLSDEKIINIVLDLFGA------------- 290
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQ-KKPTFESLKKLEYIRLIVA 258
G +T ++W++ L NP +K Q E+D+V+G+ ++P L Y+ +
Sbjct: 291 ----GFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFIL 346
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
E+ R P I + D G+ +P G +F++
Sbjct: 347 ETFRHSSFVPFTIPHSTTRDT-------SLKGFYIPKGRCVFVN 383
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 126/320 (39%), Gaps = 49/320 (15%)
Query: 2 GKGLIPADLDTWKQRRRVIAPGFHALYLEAMVNMFADCSERTIMKFEKLLEGEDSRGGNS 61
G G+I A+ + WK RR F + ER + + L+E + R
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIE--ELRKSKG 143
Query: 62 IELDLEAEFSSLALDIIGLGVFNYDFGSVTKES-----------PVIKAVYGTLFEAEHR 110
+D F S+ +II VF F +E +I +V+G LFE
Sbjct: 144 ALMDPTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFE---- 199
Query: 111 STFYIPYWK-IPLARWIVPRQRKFQNDLKIINDCLDGLIRNAKETRQETDVEKLQSRDYS 169
+ + K P A R+ +L+ IN + + +ET ++ RD
Sbjct: 200 --LFSGFLKHFPGA------HRQVYKNLQEINAYIGHSVEKHRET-----LDPSAPRD-- 244
Query: 170 NLKDASLLRFLVDMRGA--DVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVK 227
L D LL + A + + L + +++ AG ETT+ L + L+ + P +
Sbjct: 245 -LIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAE 303
Query: 228 KAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRG 286
+ E++ V+G + P K+ Y ++ E R P+ + + +R
Sbjct: 304 RVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHT---SFR- 359
Query: 287 DKDGYPVPAGTDIFLSVSSS 306
GY +P T++FL +S++
Sbjct: 360 ---GYIIPKDTEVFLILSTA 376
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 192 QLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLE 251
+L+D ++ +L AGHET + L+ LL Q+ ++ + E + + ++ T E+LKK+
Sbjct: 243 ELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMP 302
Query: 252 YIRLIVAESLRLYP 265
Y+ ++ E LRL P
Sbjct: 303 YLDQVLQEVLRLIP 316
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 135 NDLKIINDCLDG----LIRNAKETR---QETDVEKLQSRDYSNLKDASLLRFLVDM---- 183
N+ ++ DC G +++N TR +E E S D +N +D + FL+ M
Sbjct: 199 NNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDF-IDCFLIKMEQEK 257
Query: 184 --RGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QK 240
+ ++ + L + + +AG ETT+ L + + LL ++P K Q E+D V+G +
Sbjct: 258 DNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHR 317
Query: 241 KPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIF 300
P + + Y +V E R P + + D +R Y +P GT I
Sbjct: 318 SPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDT---KFR----NYLIPKGTTIM 370
Query: 301 LSVSS 305
++S
Sbjct: 371 ALLTS 375
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 156 QETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLI-----AGHETTAA 210
Q+T E Q D ++++D + F +G + + + L+ AG +T
Sbjct: 241 QKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTT 300
Query: 211 VLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESLRLYPQPPL 269
++W++ L P +K Q E+D+V+G +++P +L Y+ + E+ R P
Sbjct: 301 AISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPF 360
Query: 270 LIRRTIKPDVLPGGY 284
I + D G+
Sbjct: 361 TIPHSTTRDTTLNGF 375
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
++ E+LRL+P P +++ R K + G+R
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR 338
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
++ E+LRL+P P +++ R K + G+R
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR 338
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
++ E+LRL+P P +++ R K + G+R
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR 338
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 197 LMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKP-TFESLKKLEYIRL 255
++M+ AGH T++ +W + L ++ E+D + G + +F +L+++ +
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 256 IVAESLRLYPQPPLLIRRTIKPDVLPGGYR 285
++ E+LRL+P P +++ R K + G+R
Sbjct: 310 VLKETLRLHP-PLIILMRVAKGEFEVQGHR 338
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 28/253 (11%)
Query: 54 EDSRGGNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTF 113
+++RG S+ LD++ ++ L +F G V + E +ST
Sbjct: 152 QNARG--SLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTV 209
Query: 114 YIPYWKIPLARWIVPRQRKFQNDLKIINDCLDGLIRNA-KETRQETDVEKLQSRDYSNLK 172
+ + L+RWI P+ K + DC+ N ++ QE + Q Y+ +
Sbjct: 210 QLMFMPRSLSRWISPKVWKEHFEAW---DCIFQYGDNCIQKIYQELAFNRPQ--HYTGIV 264
Query: 173 DASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNP--SKVKKAQ 230
LL+ A++ ++ + M + +TTA L +F LA+NP ++ + +
Sbjct: 265 AELLLK-------AELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQE 317
Query: 231 AEVDSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDG 290
+ + + P ++ +L +R + E+LRLYP L + R + D++
Sbjct: 318 SLAAAASISEHPQ-KATTELPLLRAALKETLRLYPV-GLFLERVVSSDLV-------LQN 368
Query: 291 YPVPAGT--DIFL 301
Y +PAGT +FL
Sbjct: 369 YHIPAGTLVQVFL 381
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDM------RGADVDDRQLRDDLMTMLIAGHETTAAVLTW 214
E +S D +N +D + FL+ M + ++ L + + + AG ETT+ L +
Sbjct: 233 EHQESMDMNNPQDF-IDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRY 291
Query: 215 AVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRR 273
A+ LL ++P K Q E++ V+G+ + P + + Y +V E R P +
Sbjct: 292 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH 351
Query: 274 TIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSS 305
+ D+ +R Y +P GT I +S++S
Sbjct: 352 AVTCDI---KFR----NYLIPKGTTILISLTS 376
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 15/152 (9%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDM------RGADVDDRQLRDDLMTMLIAGHETTAAVLTW 214
E +S D +N +D + FL+ M + ++ L + + + AG ETT+ L +
Sbjct: 231 EHQESMDMNNPQDF-IDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRY 289
Query: 215 AVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVAESLRLYPQPPLLIRR 273
A+ LL ++P K Q E++ V+G+ + P + + Y +V E R P +
Sbjct: 290 ALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH 349
Query: 274 TIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSS 305
+ D+ +R Y +P GT I +S++S
Sbjct: 350 AVTCDI---KFR----NYLIPKGTTILISLTS 374
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 195 DDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
+ +T+L+AGHET A+ LTW+ LL+ P K+ V F+
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR----VAESEEAALAAFQ--------- 259
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
E+LRLYP +L RR +P +L G+ +P GT + LS
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLL-----GEDR---LPQGTTLVLS 295
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 25/108 (23%)
Query: 195 DDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIR 254
+ +T+L+AGHET A+ LTW+ LL+ P K+ V F+
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKR----VAESEEAALAAFQ--------- 259
Query: 255 LIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLS 302
E+LRLYP +L RR +P +L G+ +P GT + LS
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLL-----GEDR---LPPGTTLVLS 295
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVA 258
+L AG ETT+ L +A+ LL ++P K Q E++ V+G+ + P + + Y +V
Sbjct: 277 LLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVH 336
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSS 305
E R P + + DV +R Y +P GT I S++S
Sbjct: 337 EVQRYIDLIPTSLPHAVTCDV---KFR----NYLIPKGTTILTSLTS 376
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 203 AGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG-QKKPTFESLKKLEYIRLIVAESL 261
AG ETT+ L +++ LL ++P + Q E++ V+G + P + ++ Y ++ E
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQ 335
Query: 262 RLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSS 305
R P + + DV +R Y +P GTDI S++S
Sbjct: 336 RFIDLLPTNLPHAVTRDV---RFR----NYFIPKGTDIITSLTS 372
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PTFESLKKLEYIRLIVA 258
+ AG ETT+ L + + +L + P +K E+D V+G + P + +++ Y+ +V
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 259 ESLRLYPQPPLLIRRTIKPDVLPGGYRGDK--DGYPVPAGTDIFLSVSS 305
E R T+ P LP D GY +P GT + ++ S
Sbjct: 335 EIQRFI---------TLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDS 374
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKK-PT 243
GA +D + + + A +T + L W + L + P + QAE+D V+G+ + P
Sbjct: 272 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC 331
Query: 244 FESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKD 289
L Y+ + E++R P+ I + GY KD
Sbjct: 332 MGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 24/120 (20%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
+DD +LR + T+L+AG+ETT L A++ AQ+P + K +
Sbjct: 238 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 280
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSSY 307
+ E V E LR P P+ R D G R +P GT +F+ ++
Sbjct: 281 ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVR-------IPTGTPVFMCAHVAH 333
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 24/120 (20%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESL 247
+DD +LR + T+L+AG+ETT L A++ AQ+P + K +
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK----------------- 270
Query: 248 KKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSVSSSY 307
+ E V E LR P P+ R D G R +P GT +F+ ++
Sbjct: 271 ENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVR-------IPTGTPVFMCAHVAH 323
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 149 RNAKETRQET-DVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHET 207
NA+E E+ E LQ R+ ++ + LR ++ + DD + + +L A
Sbjct: 215 HNAREKLAESLRHENLQKRE--SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQAN 272
Query: 208 TAAVLTWAVFLLAQNPSKVKKAQAEVDSVL---GQK-----KPTFES---LKKLEYIRLI 256
T W++F + +NP +K A EV L GQK P S L L + I
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 257 VAESLRL 263
+ ESLRL
Sbjct: 333 IKESLRL 339
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 149 RNAKETRQET-DVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHET 207
NA+E E+ E LQ R+ ++ + LR ++ + DD + + +L A
Sbjct: 215 HNAREKLAESLRHENLQKRE--SISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQAN 272
Query: 208 TAAVLTWAVFLLAQNPSKVKKAQAEVDSVL---GQK-----KPTFES---LKKLEYIRLI 256
T W++F + +NP +K A EV L GQK P S L L + I
Sbjct: 273 TIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSI 332
Query: 257 VAESLRL 263
+ ESLRL
Sbjct: 333 IKESLRL 339
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 174 ASLLRFLV--DMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQA 231
A L+ LV + ++D +L M +LIAGHETTA++ + +V L +P + +A
Sbjct: 213 AGLVGALVADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRA 272
Query: 232 EVDSVLG 238
+ V G
Sbjct: 273 DRSLVPG 279
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLG 238
+ ++D +L M +LIAGHETTA++ + +V L +P + +A+ V G
Sbjct: 224 LANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLVPG 279
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 153 ETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVL 212
E RQ+ V DY + L R L D + + D ++ ++ ML G +TT+ L
Sbjct: 247 ELRQKGSVH----HDYRGI----LYRLLGDSKMSFED---IKANVTEMLAGGVDTTSMTL 295
Query: 213 TWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL-EYIRLIVAESLRLYPQPPLLI 271
W ++ +A+N +AEV + Q + ++ +L ++ + E+LRL+P L
Sbjct: 296 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ 355
Query: 272 RRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
R + VL Y +PA T + +++
Sbjct: 356 RYLVNDLVL--------RDYMIPAKTLVQVAI 379
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 153 ETRQETDVEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVL 212
E RQ+ V DY + L R L D + + D ++ ++ ML G +TT+ L
Sbjct: 244 ELRQKGSVH----HDYRGI----LYRLLGDSKMSFED---IKANVTEMLAGGVDTTSMTL 292
Query: 213 TWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKL-EYIRLIVAESLRLYPQPPLLI 271
W ++ +A+N +AEV + Q + ++ +L ++ + E+LRL+P L
Sbjct: 293 QWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQ 352
Query: 272 RRTIKPDVLPGGYRGDKDGYPVPAGTDIFLSV 303
R + VL Y +PA T + +++
Sbjct: 353 RYLVNDLVL--------RDYMIPAKTLVQVAI 376
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + AQNP +
Sbjct: 229 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQ 273
>pdb|3UCP|A Chain A, Outer Membrane Endecaheme Cytochrome Unda From Shewanella
Sp. Hrcr-6
pdb|3UFH|A Chain A, Crystal Structure Of Unda With Iron Citrate Bound
pdb|3UFK|A Chain A, Crystal Structure Of Unda Complexed With Iron
Nitrilotriacetate
Length = 874
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 34/140 (24%)
Query: 52 EGEDSRG-----------GNSIELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAV 100
+G+DS G G++I+ ++E+ + L ++ GV+ Y F + P I+
Sbjct: 137 DGKDSAGNPITKEVKFTPGDAIQANIESSCKTTCLTVVDSGVYRYTFQTNLSTLPAIEG- 195
Query: 101 YGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKIINDCLDGL----IRNAKETRQ 156
+ Y + R + Q D K++N +D L R AKET
Sbjct: 196 ------------LDLTYDPTLIHRITLELQTDGSKDAKLVNSHIDFLPSDNFRVAKETET 243
Query: 157 ETDVE------KLQSRDYSN 170
T V+ K S +YS+
Sbjct: 244 RTVVDLEANCIKCHSTNYSD 263
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 149 RNAKETRQETDVEKLQSRDYSNL-KDASLLRFLVDMRGADVDD--RQLRDDLMTMLIA-- 203
R+A+ Q+ E + +R+ KD + L + GA D R + ++ M++A
Sbjct: 202 RDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAM 261
Query: 204 --GHETTAAVLTWAVFLL--AQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
G T+ TW++ L +N + K E+D Q ++++ + E
Sbjct: 262 FAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYD-NVMEEMPFAEQCARE 320
Query: 260 SLRLYPQPPLLIRRTIKP 277
S+R P +L+R+ +KP
Sbjct: 321 SIRRDPPLVMLMRKVLKP 338
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 149 RNAKETRQETDVEKLQSRDYSNLKDASLLRFLV--DMRGADVDDRQLRDDLMTMLIAGHE 206
+NA + + L R + DA L L DM G + +L M +LIAGHE
Sbjct: 180 KNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHE 239
Query: 207 TTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTF 244
TT ++ V L +P + +K AE S++ F
Sbjct: 240 TTVNLIGNGVLALLTHPDQ-RKLLAEDPSLISSAVEEF 276
>pdb|2X4G|A Chain A, Crystal Structure Of Pa4631, A
Nucleoside-Diphosphate-Sugar Epimerase From Pseudomonas
Aeruginosa
Length = 342
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 203 AGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAESLR 262
AG E L +F PS+ ++ Q EV S LGQ P + + + R++ S
Sbjct: 69 AGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128
Query: 263 LYPQPP 268
P+ P
Sbjct: 129 AMPRHP 134
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 192 QLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
+LRD L+ M+ AG+ETT V+ AV L P ++
Sbjct: 231 ELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQL 265
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 160 VEKLQSRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLL 219
V + Q+ L D + R L + D+D ++ + +L+AGHETT + L
Sbjct: 203 VGRKQAEPEDGLLDELIARQLEE---GDLDHDEVVMIALVLLVAGHETTVNAIALGALTL 259
Query: 220 AQNPSKV 226
Q+P ++
Sbjct: 260 IQHPEQI 266
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 30/50 (60%)
Query: 183 MRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAE 232
+ G +DD+ + + + AGH+TT++ A+ L++NP ++ A+++
Sbjct: 247 LDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSD 296
>pdb|2ERF|A Chain A, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain At 1.45a Resolution
pdb|2ES3|A Chain A, Crystal Structure Of Thrombospondin-1 N-Terminal Domain In
P1 Form At 1.85a Resolution
pdb|2ES3|B Chain B, Crystal Structure Of Thrombospondin-1 N-Terminal Domain In
P1 Form At 1.85a Resolution
Length = 209
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 103 TLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKII----------NDCLDGLIRNAK 152
TLF E R+ YI K+ A VP Q F DL I ND G+++N +
Sbjct: 133 TLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVR 192
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 161 EKLQSRDYSNLKDASLLRFLVDMRGAD-VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLL 219
E +Q R +D ++ L+ R D + + + + + IAGHETT +++ +V L
Sbjct: 193 ELIQKRKRHPQQD--MISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCL 250
Query: 220 AQNPSKVKKAQAEVD 234
Q+P ++ K + D
Sbjct: 251 LQHPEQLLKLRENPD 265
>pdb|1Z78|A Chain A, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain
Length = 215
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 103 TLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKII----------NDCLDGLIRNAK 152
TLF E R+ YI K+ A VP Q F DL I ND G+++N +
Sbjct: 139 TLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVR 198
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
VDD L + T+LIA H+TTA ++ LL +P ++
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQL 260
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 185 GADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSK---VKKAQAEVDSVL 237
G + D ++ L M+ AGHETT +++ AV L+ +P + V +AE +V+
Sbjct: 224 GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVV 279
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
VDD L + T+LIA H+TTA ++ LL +P ++
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQL 260
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 188 VDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKV 226
VDD L + T+LIA H+TTA ++ LL +P ++
Sbjct: 222 VDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQL 260
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 236 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 280
>pdb|2OUH|A Chain A, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp10
pdb|2OUH|B Chain B, Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp10
pdb|2OUJ|A Chain A, The Crystal Structure Of The Thrombospondin-1 N-Terminal
Domain In Complex With Fractionated Heparin Dp8
Length = 251
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 103 TLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKII----------NDCLDGLIRNAK 152
TLF E R+ YI K+ A VP Q F DL I ND G+++N +
Sbjct: 143 TLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVR 202
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 237 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 281
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 244 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 288
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 253 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 297
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 186 ADVDDRQLRDD-----LMTMLIAGHETTAAVLTWAVFLLAQNPSK 225
AD+D +L DD ++ + +AG+ETT +T + A++P +
Sbjct: 246 ADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQ 290
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 22/118 (18%)
Query: 174 ASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEV 233
+SL+ VD G + R++ + +++AG+ETT +T V L++ P + + ++
Sbjct: 247 SSLVEAEVD--GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDF 304
Query: 234 DSVLGQKKPTFESLKKLEYIRLIVAESLRLYPQPPLLIRRTIKPDVLPGGYR---GDK 288
D + PT E + + P + +RRT+ D+ G + GDK
Sbjct: 305 DGL----APT-------------AVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDK 345
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 279 LCRYHTASALAIKRTAKEDVMIG 301
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 149 RNAKETRQETDVEKLQSRDYSNLKDASLLRFLV--DMRGADVDDRQLRDDLMTMLIAGHE 206
+NA + + L R + DA L L D G + +L M +LIAGHE
Sbjct: 180 KNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHE 239
Query: 207 TTAAVLTWAVF----------LLAQNPSKVKKAQAE 232
TT ++ V LLA++PS + A E
Sbjct: 240 TTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEE 275
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 279 LCRYHTASALAIKRTAKEDVMIG 301
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 237 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 279
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 280 LCRYHTASALAIKRTAKEDVMIG 302
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 278 LCRYHTASALAIKRTAKEDVMIG 300
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 279 LCRYHTATALAIKRTAKEDVMIG 301
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 278 LCRYHTASALAIKRTAKEDVMIG 300
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 278 LCRYHTATALAIKRTAKEDVMIG 300
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 278
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 279 LCRYHTAVALAIKRTAKEDVMIG 301
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 193 LRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFES-LKKLE 251
++ ++ ML G TT+ L W ++ +A++ + + + EV + Q + L+ +
Sbjct: 277 VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKMLQMVP 336
Query: 252 YIRLIVAESLRLYP 265
++ + E+LRL+P
Sbjct: 337 LLKASIKETLRLHP 350
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 17/83 (20%)
Query: 200 MLIAGHETTAAVLTWAVFLLAQNPSKVKKAQAEVDSVLGQKKPTFESLKKLEYIRLIVAE 259
+L+AG+ T ++ V LAQ+P ++ AQ + + L P F V E
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQL--AQLKANPSLA---PQF------------VEE 277
Query: 260 SLRLYPQPPLLIRRTIKPDVLPG 282
R + L I+RT K DV+ G
Sbjct: 278 LCRYHTAVALAIKRTAKEDVMIG 300
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,958,384
Number of Sequences: 62578
Number of extensions: 404367
Number of successful extensions: 1024
Number of sequences better than 100.0: 137
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 761
Number of HSP's gapped (non-prelim): 140
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)