Query 019914
Match_columns 334
No_of_seqs 531 out of 2701
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:59:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 6.3E-31 2.2E-35 219.5 18.2 129 204-332 31-159 (169)
2 1d9s_A Cyclin-dependent kinase 100.0 2.5E-29 8.4E-34 201.6 11.8 128 204-332 6-134 (136)
3 3v30_A DNA-binding protein rfx 100.0 5.1E-28 1.7E-32 201.3 19.2 132 201-332 27-158 (172)
4 2jab_A H10-2-G3; HER2, darpin, 100.0 1.6E-28 5.6E-33 196.8 14.6 127 206-332 10-136 (136)
5 4gpm_A Engineered protein OR26 100.0 6.1E-28 2.1E-32 201.3 16.8 121 212-332 6-126 (169)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.3E-27 7.8E-32 197.2 19.7 129 204-332 41-169 (169)
7 2rfm_A Putative ankyrin repeat 100.0 2E-27 6.7E-32 201.4 18.8 154 162-332 37-190 (192)
8 3v31_A Ankyrin repeat family A 100.0 2.9E-27 9.8E-32 195.8 18.9 154 162-332 5-158 (167)
9 4b93_B Ankyrin repeat domain-c 100.0 9.5E-28 3.3E-32 215.0 16.7 140 192-332 69-208 (269)
10 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2E-27 6.8E-32 186.6 16.3 124 209-332 1-124 (126)
11 1awc_B Protein (GA binding pro 100.0 3.7E-27 1.2E-31 192.6 18.4 124 206-329 30-153 (153)
12 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.5E-27 8.4E-32 194.9 17.1 128 204-332 32-160 (162)
13 3twr_A Tankyrase-2; ankyrin re 100.0 7.4E-28 2.5E-32 198.9 13.9 129 204-333 36-164 (165)
14 1bi7_B P16INK4A, MTS1, multipl 99.9 7.3E-28 2.5E-32 197.6 11.9 127 205-332 7-134 (156)
15 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.8E-27 3.4E-31 190.3 18.0 126 204-331 30-155 (156)
16 3f6q_A Integrin-linked protein 99.9 4.5E-27 1.5E-31 197.1 15.6 130 203-332 32-161 (179)
17 3c5r_A BARD-1, BRCA1-associate 99.9 4.8E-28 1.7E-32 194.1 8.9 128 205-332 5-132 (137)
18 2rfm_A Putative ankyrin repeat 99.9 7.5E-27 2.6E-31 197.8 14.7 129 204-332 29-157 (192)
19 2f8y_A Notch homolog 1, transl 99.9 6E-26 2E-30 196.3 20.0 156 162-333 60-215 (223)
20 3v31_A Ankyrin repeat family A 99.9 2.3E-26 8E-31 190.3 16.0 124 209-332 2-125 (167)
21 2rfa_A Transient receptor pote 99.9 6.5E-26 2.2E-30 197.4 18.2 155 162-332 5-181 (232)
22 2rfa_A Transient receptor pote 99.9 6.8E-26 2.3E-30 197.2 18.2 159 162-332 39-220 (232)
23 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.9E-26 1.3E-30 189.7 15.9 126 207-332 11-136 (169)
24 2etb_A Transient receptor pote 99.9 4.4E-26 1.5E-30 201.7 16.3 165 162-332 45-244 (256)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 7.8E-26 2.7E-30 200.1 17.7 154 162-331 92-245 (253)
26 3aji_A 26S proteasome non-ATPa 99.9 1.7E-25 5.8E-30 194.5 19.4 154 162-332 42-195 (231)
27 3aji_A 26S proteasome non-ATPa 99.9 1.5E-25 5.3E-30 194.7 19.1 155 162-332 8-162 (231)
28 3hra_A Ankyrin repeat family p 99.9 1.6E-25 5.4E-30 190.5 18.7 155 161-332 40-201 (201)
29 3aaa_C Myotrophin, protein V-1 99.9 1.4E-26 4.8E-31 182.2 11.2 119 207-328 4-122 (123)
30 2dzn_A Probable 26S proteasome 99.9 2.1E-25 7.3E-30 193.3 19.6 157 162-332 38-198 (228)
31 3jxi_A Vanilloid receptor-rela 99.9 2.1E-26 7.1E-31 204.1 12.5 126 207-332 90-248 (260)
32 1yyh_A HN1;, notch 1, ankyrin 99.9 1.3E-25 4.5E-30 198.6 17.6 154 162-332 59-213 (253)
33 3t8k_A Uncharacterized protein 99.9 1.4E-26 4.9E-31 196.0 10.7 124 208-331 36-176 (186)
34 2pnn_A Transient receptor pote 99.9 9.5E-26 3.3E-30 201.5 16.5 127 206-332 97-256 (273)
35 1oy3_D Transcription factor in 99.9 1.3E-25 4.6E-30 200.5 17.1 154 162-332 47-248 (282)
36 1ihb_A P18-INK4C(INK6), cyclin 99.9 4.9E-26 1.7E-30 187.1 13.1 123 209-332 4-126 (162)
37 1awc_B Protein (GA binding pro 99.9 1E-25 3.5E-30 183.9 14.5 122 210-332 2-123 (153)
38 1oy3_D Transcription factor in 99.9 3.3E-25 1.1E-29 197.9 18.9 157 162-332 11-215 (282)
39 2f8y_A Notch homolog 1, transl 99.9 2.4E-25 8.3E-30 192.4 17.4 139 193-332 42-181 (223)
40 4b93_B Ankyrin repeat domain-c 99.9 3.3E-26 1.1E-30 204.9 12.1 148 162-328 88-235 (269)
41 2dzn_A Probable 26S proteasome 99.9 4.6E-25 1.6E-29 191.2 18.9 155 162-332 4-163 (228)
42 1s70_B 130 kDa myosin-binding 99.9 4.5E-25 1.5E-29 199.2 19.3 153 163-332 43-255 (299)
43 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-25 4E-30 185.7 14.1 126 207-332 5-131 (165)
44 4hbd_A KN motif and ankyrin re 99.9 1.7E-25 5.8E-30 200.9 16.2 155 162-332 113-273 (276)
45 3hra_A Ankyrin repeat family p 99.9 6.5E-25 2.2E-29 186.7 19.0 129 204-332 33-168 (201)
46 3f6q_A Integrin-linked protein 99.9 2.5E-25 8.7E-30 186.4 16.2 125 208-332 3-128 (179)
47 3v30_A DNA-binding protein rfx 99.9 1.6E-25 5.5E-30 186.1 14.5 123 210-332 2-125 (172)
48 1ikn_D Protein (I-kappa-B-alph 99.9 9E-26 3.1E-30 197.3 13.6 130 204-333 72-208 (236)
49 3ehr_A Osteoclast-stimulating 99.9 2.7E-26 9.4E-31 198.9 9.9 130 203-332 66-196 (222)
50 3deo_A Signal recognition part 99.9 6.6E-26 2.2E-30 190.9 11.6 127 206-333 40-183 (183)
51 2vge_A RELA-associated inhibit 99.9 3.9E-26 1.3E-30 199.6 10.3 129 204-332 15-146 (229)
52 3ljn_A Hypothetical protein; a 99.9 2.8E-25 9.6E-30 206.6 16.7 170 162-332 86-267 (364)
53 2xai_A ASB-9, ankyrin repeat a 99.9 8.5E-25 2.9E-29 194.4 18.7 126 205-332 64-189 (261)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.1E-26 2.1E-30 199.3 10.3 126 207-332 34-162 (239)
55 1k1a_A B-cell lymphoma 3-encod 99.9 1.5E-24 5.2E-29 189.3 19.0 154 162-332 48-206 (241)
56 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-25 4.2E-30 196.4 12.0 130 203-332 38-174 (236)
57 2etb_A Transient receptor pote 99.9 2.2E-25 7.6E-30 197.1 13.7 127 206-332 39-204 (256)
58 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-24 7.6E-29 188.3 19.6 158 162-332 11-173 (241)
59 3b7b_A Euchromatic histone-lys 99.9 2.2E-24 7.7E-29 188.1 18.9 126 207-332 74-200 (237)
60 3b7b_A Euchromatic histone-lys 99.9 3.8E-24 1.3E-28 186.6 19.4 154 162-332 13-167 (237)
61 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.6E-25 2.6E-29 179.0 14.0 121 210-331 2-123 (156)
62 3d9h_A CDNA FLJ77766, highly s 99.9 2.8E-24 9.4E-29 193.8 18.6 152 162-331 61-212 (285)
63 3kea_A K1L; tropism, ANK repea 99.9 3.8E-25 1.3E-29 199.5 12.8 127 204-332 25-152 (285)
64 3ui2_A Signal recognition part 99.9 1.4E-25 4.8E-30 197.8 9.7 124 207-331 42-182 (244)
65 2xai_A ASB-9, ankyrin repeat a 99.9 3.7E-24 1.3E-28 190.3 18.2 122 207-331 98-219 (261)
66 3utm_A Tankyrase-1; tankyrase, 99.9 6E-24 2E-28 195.3 19.8 90 243-332 211-303 (351)
67 1wdy_A 2-5A-dependent ribonucl 99.9 9.3E-24 3.2E-28 188.2 20.2 164 162-332 107-276 (285)
68 2pnn_A Transient receptor pote 99.9 1.5E-24 5E-29 193.8 14.5 128 205-332 49-216 (273)
69 3ljn_A Hypothetical protein; a 99.9 1.5E-24 5.2E-29 201.7 14.7 152 162-332 55-234 (364)
70 4hbd_A KN motif and ankyrin re 99.9 1.5E-24 5.2E-29 194.7 13.9 130 203-332 104-240 (276)
71 1n11_A Ankyrin; clathrin, BAND 99.9 5.3E-24 1.8E-28 202.7 18.4 124 208-331 243-366 (437)
72 1wdy_A 2-5A-dependent ribonucl 99.9 1.4E-23 4.9E-28 187.0 19.7 130 202-331 31-170 (285)
73 3d9h_A CDNA FLJ77766, highly s 99.9 4.1E-24 1.4E-28 192.6 16.3 128 204-332 53-180 (285)
74 1sw6_A Regulatory protein SWI6 99.9 5.7E-25 1.9E-29 202.2 9.9 136 197-332 118-306 (327)
75 3jxi_A Vanilloid receptor-rela 99.9 2.5E-24 8.5E-29 190.7 13.7 126 207-332 43-208 (260)
76 2fo1_E LIN-12 protein; beta-ba 99.9 8.3E-24 2.8E-28 197.9 17.5 129 204-332 229-369 (373)
77 3kea_A K1L; tropism, ANK repea 99.9 3E-24 1E-28 193.5 13.3 135 196-332 82-218 (285)
78 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-23 3.8E-28 193.5 17.1 154 162-332 60-270 (351)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-24 4.4E-29 190.9 9.9 124 208-332 3-126 (239)
80 1n11_A Ankyrin; clathrin, BAND 99.9 2E-23 7E-28 198.6 18.9 127 204-330 272-398 (437)
81 4g8k_A 2-5A-dependent ribonucl 99.9 2.7E-23 9.2E-28 191.2 18.2 164 162-332 127-296 (337)
82 1dcq_A PYK2-associated protein 99.9 1.5E-23 5.1E-28 188.6 15.3 122 211-332 131-261 (278)
83 3eu9_A Huntingtin-interacting 99.9 3.6E-23 1.2E-27 180.0 17.0 154 162-332 78-233 (240)
84 3jue_A Arfgap with coiled-coil 99.9 1.4E-23 4.7E-28 195.8 14.8 125 208-332 197-324 (368)
85 2b0o_E UPLC1; arfgap, structur 99.9 1.8E-23 6E-28 190.2 14.4 123 210-332 151-282 (301)
86 3eu9_A Huntingtin-interacting 99.9 7.1E-23 2.4E-27 178.1 17.7 155 162-332 44-200 (240)
87 3lvq_E ARF-GAP with SH3 domain 99.9 2.1E-23 7.2E-28 202.5 15.4 123 210-332 132-263 (497)
88 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.7E-23 9.1E-28 155.2 12.2 90 243-332 2-91 (93)
89 1s70_B 130 kDa myosin-binding 99.9 9E-24 3.1E-28 190.7 11.0 125 206-330 36-160 (299)
90 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.3E-23 1.5E-27 154.0 12.7 93 209-301 1-93 (93)
91 2fo1_E LIN-12 protein; beta-ba 99.9 5.2E-23 1.8E-27 192.5 15.0 154 162-332 168-336 (373)
92 4g8k_A 2-5A-dependent ribonucl 99.9 2.1E-22 7.3E-27 185.2 18.5 150 162-332 170-324 (337)
93 2l6b_A NR1C; ankyrin, consensu 99.9 3.3E-23 1.1E-27 160.7 7.9 108 206-313 5-112 (115)
94 1bi7_B P16INK4A, MTS1, multipl 99.9 7.2E-23 2.5E-27 167.7 10.4 137 162-316 14-151 (156)
95 2vge_A RELA-associated inhibit 99.9 3.3E-24 1.1E-28 187.4 1.2 148 164-328 25-207 (229)
96 3c5r_A BARD-1, BRCA1-associate 99.9 1.2E-21 4.1E-26 156.6 12.2 99 233-332 1-99 (137)
97 3t8k_A Uncharacterized protein 99.9 1E-22 3.5E-27 172.3 6.2 121 210-332 6-144 (186)
98 1sw6_A Regulatory protein SWI6 99.9 2.2E-22 7.5E-27 184.9 7.4 143 161-320 132-327 (327)
99 2b0o_E UPLC1; arfgap, structur 99.9 4.9E-22 1.7E-26 180.7 8.2 111 206-322 186-299 (301)
100 1d9s_A Cyclin-dependent kinase 99.9 1.5E-21 5.3E-26 156.0 9.5 99 233-332 2-101 (136)
101 2jab_A H10-2-G3; HER2, darpin, 99.8 2.3E-20 7.8E-25 149.1 14.7 120 163-299 17-136 (136)
102 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.8E-20 1.3E-24 144.7 15.6 122 163-301 5-126 (126)
103 2aja_A Ankyrin repeat family p 99.8 2.1E-22 7.3E-27 188.3 2.5 125 207-332 89-222 (376)
104 2l6b_A NR1C; ankyrin, consensu 99.8 4.1E-21 1.4E-25 148.8 9.0 95 238-332 4-98 (115)
105 3aaa_C Myotrophin, protein V-1 99.8 1.6E-20 5.5E-25 147.3 11.0 93 240-332 4-96 (123)
106 2zgd_A 3 repeat synthetic anky 99.8 1.4E-20 5E-25 144.9 10.1 90 239-328 20-109 (110)
107 2zgd_A 3 repeat synthetic anky 99.8 9.1E-20 3.1E-24 140.4 10.9 94 202-295 16-109 (110)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-19 3.9E-24 176.2 11.8 105 207-317 168-275 (497)
109 3deo_A Signal recognition part 99.8 4.1E-21 1.4E-25 161.5 0.9 92 240-332 41-133 (183)
110 1dcq_A PYK2-associated protein 99.8 2.3E-19 7.8E-24 161.2 12.3 97 206-302 165-264 (278)
111 3ehr_A Osteoclast-stimulating 99.8 1.6E-19 5.3E-24 156.2 8.8 132 162-310 75-207 (222)
112 2aja_A Ankyrin repeat family p 99.8 2E-21 6.9E-26 181.7 -3.7 149 162-332 94-248 (376)
113 3jue_A Arfgap with coiled-coil 99.8 1.3E-18 4.3E-23 162.2 12.4 126 195-320 219-348 (368)
114 3ui2_A Signal recognition part 99.8 1.4E-18 4.8E-23 152.9 9.2 119 210-332 15-134 (244)
115 2llw_A Heat shock protein STI1 95.0 0.02 6.7E-07 39.3 3.5 54 58-133 10-63 (71)
116 2lnm_A Protein TIC 40, chlorop 92.9 0.095 3.2E-06 34.8 3.5 20 62-81 15-34 (62)
117 2llw_A Heat shock protein STI1 86.5 1.4 4.9E-05 29.9 5.2 42 144-186 24-65 (71)
118 2llv_A Heat shock protein STI1 78.2 1.3 4.4E-05 30.1 2.4 16 77-92 28-43 (71)
119 2qsf_X RAD23, UV excision repa 74.5 0.76 2.6E-05 37.0 0.5 22 61-82 25-47 (171)
120 2llv_A Heat shock protein STI1 68.2 3.6 0.00012 27.8 2.7 38 147-185 30-68 (71)
121 2lnm_A Protein TIC 40, chlorop 67.7 4 0.00014 26.7 2.8 37 147-184 19-55 (62)
122 1oqy_A HHR23A, UV excision rep 47.9 35 0.0012 30.9 6.4 26 64-95 240-265 (368)
123 2f4m_B UV excision repair prot 35.6 14 0.00049 24.0 1.3 21 62-82 5-25 (61)
124 3zrh_A Ubiquitin thioesterase 32.8 88 0.003 28.7 6.3 49 217-265 29-91 (454)
125 1pve_A HHR23B, UV excision rep 32.8 10 0.00036 25.6 0.3 21 62-82 7-27 (72)
126 3u0c_A Invasin IPAB, 62 kDa an 31.6 50 0.0017 26.0 3.9 89 59-154 59-153 (201)
127 1gp8_A Protein (scaffolding pr 27.4 42 0.0014 19.5 2.1 19 213-231 16-34 (40)
128 3sz7_A HSC70 cochaperone (SGT) 26.1 22 0.00075 27.0 1.1 8 57-64 157-164 (164)
129 1kdx_B CREB; complex (transcri 20.2 37 0.0013 18.2 0.9 23 139-161 4-26 (28)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=6.3e-31 Score=219.46 Aligned_cols=129 Identities=39% Similarity=0.619 Sum_probs=125.3
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A 110 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA 110 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.++|++|+++|++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 111 ~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 111 AENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999976
No 2
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=2.5e-29 Score=201.64 Aligned_cols=128 Identities=24% Similarity=0.384 Sum_probs=124.3
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCC-CChHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKN-KNTALHY 282 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~-g~TpLh~ 282 (334)
+..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. ++.+++++|+++|++++.+|.. |+||||+
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHD 84 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHH
Confidence 4567889999999999999999999999999999999999999999999 9999999999999999999999 9999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 283 AAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 283 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++++
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999875
No 3
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=5.1e-28 Score=201.32 Aligned_cols=132 Identities=26% Similarity=0.330 Sum_probs=126.7
Q ss_pred hhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHH
Q 019914 201 DEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTAL 280 (334)
Q Consensus 201 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpL 280 (334)
...+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|+|||
T Consensus 27 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 106 (172)
T 3v30_A 27 NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPL 106 (172)
T ss_dssp GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 34566678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 281 HYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 281 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 107 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 107 LYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999864
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=1.6e-28 Score=196.85 Aligned_cols=127 Identities=32% Similarity=0.437 Sum_probs=121.6
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
....+.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999875
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=6.1e-28 Score=201.31 Aligned_cols=121 Identities=37% Similarity=0.581 Sum_probs=118.4
Q ss_pred cHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHH
Q 019914 212 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKEC 291 (334)
Q Consensus 212 t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~ 291 (334)
+.|+.||..|+.++|++||+.|++++.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 292 VALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 292 v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+++|+++|++++.+|.+|+||||+|+..|+.++|++|++++
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g 126 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999875
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.3e-27 Score=197.15 Aligned_cols=129 Identities=34% Similarity=0.451 Sum_probs=124.4
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 120 (169)
T 2y1l_E 41 NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLA 120 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 121 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 121 AMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999875
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2e-27 Score=201.42 Aligned_cols=154 Identities=25% Similarity=0.351 Sum_probs=140.3
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++...+...++.+.++.|.+.-. ..+..+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 37 t~L~~A~~~g~~~~v~~Ll~~~~-----------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 37 TPLMVACMLGMENAIDKLVENFD-----------------KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp CHHHHHHHHTCGGGHHHHHHHHC-----------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHhcc-----------------ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 56666777788888887765321 1234567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q 019914 322 HDVLKLLEKDA 332 (334)
Q Consensus 322 ~e~v~~Ll~~~ 332 (334)
.+++++|++++
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999864
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.9e-27 Score=195.81 Aligned_cols=154 Identities=24% Similarity=0.286 Sum_probs=138.8
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+...+...++.+.++.+.+.- . ..+..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 5 t~L~~A~~~g~~~~v~~ll~~~----------------~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 67 (167)
T 3v31_A 5 LSVHQLAAQGEMLYLATRIEQE----------------N-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 67 (167)
T ss_dssp CCHHHHHHTTCHHHHHHHHHHS----------------S-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred chHHHHHHCCCHHHHHHHHHcC----------------C-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 4555666677777777765431 1 2345677899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 68 GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY 147 (167)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q 019914 322 HDVLKLLEKDA 332 (334)
Q Consensus 322 ~e~v~~Ll~~~ 332 (334)
.+++++|+++.
T Consensus 148 ~~~~~~L~~~~ 158 (167)
T 3v31_A 148 RSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=9.5e-28 Score=214.97 Aligned_cols=140 Identities=28% Similarity=0.393 Sum_probs=126.8
Q ss_pred cchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 019914 192 TTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA 271 (334)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~ 271 (334)
...+...|.++ +..+.+|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.
T Consensus 69 v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 69 LAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp ------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC
Confidence 34445556554 45678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 272 LDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 272 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|..|+||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+.++|++|++++
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G 208 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHG 208 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999999876
No 10
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=2e-27 Score=186.61 Aligned_cols=124 Identities=43% Similarity=0.613 Sum_probs=121.6
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 209 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 209 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
+|.|+||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 289 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 289 ~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999986
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.7e-27 Score=192.57 Aligned_cols=124 Identities=33% Similarity=0.416 Sum_probs=120.6
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
.+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 36679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHh
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 329 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll 329 (334)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|.
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred cCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999999999999999999999999999999999999999983
No 12
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.5e-27 Score=194.93 Aligned_cols=128 Identities=28% Similarity=0.374 Sum_probs=123.4
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+|+. |+.+++++|++.|++++.++..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 110 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLA 110 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 4457789999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAA-VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~-~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 111 ~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 111 AKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 999999999999999998 6999999999999999999999999999986
No 13
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=7.4e-28 Score=198.95 Aligned_cols=129 Identities=36% Similarity=0.511 Sum_probs=122.5
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
...+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 115 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEA 115 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcCC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 333 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~~ 333 (334)
+..|+.+++++|+++|++++.+|..|+||||+|+. ++.+++++|++++=
T Consensus 116 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 116 AAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999999999999999877 89999999999874
No 14
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=7.3e-28 Score=197.61 Aligned_cols=127 Identities=26% Similarity=0.381 Sum_probs=121.0
Q ss_pred hhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCh-HHHHH
Q 019914 205 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNT-ALHYA 283 (334)
Q Consensus 205 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~T-pLh~A 283 (334)
..+..|.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+ .++.+++++|+++|++++.+|..|+| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 44677999999999999999999999999999999999999999985 99999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999876
No 15
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=9.8e-27 Score=190.26 Aligned_cols=126 Identities=21% Similarity=0.355 Sum_probs=121.9
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+ +..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA 108 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 4456789999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 109 ~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 109 VQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999 99999999999999999999999999999986
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.5e-27 Score=197.10 Aligned_cols=130 Identities=26% Similarity=0.342 Sum_probs=125.8
Q ss_pred hhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHH
Q 019914 203 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 282 (334)
Q Consensus 203 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~ 282 (334)
.+..+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 111 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHY 111 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 283 AAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 283 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+..++.+++++|+++|++++.+|..|+|||++|+..++.+++++|++++
T Consensus 112 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 112 ACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp HHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999876
No 17
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=4.8e-28 Score=194.10 Aligned_cols=128 Identities=31% Similarity=0.448 Sum_probs=120.6
Q ss_pred hhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHH
Q 019914 205 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 284 (334)
Q Consensus 205 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~ 284 (334)
..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 285 GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 285 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
..++.+++++|+++|++++.+|..|+||||+|+..+..+++++|.+++
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999888764
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=7.5e-27 Score=197.83 Aligned_cols=129 Identities=26% Similarity=0.346 Sum_probs=125.4
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 157 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999875
No 19
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=6e-26 Score=196.26 Aligned_cols=156 Identities=25% Similarity=0.332 Sum_probs=140.2
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+..++...++.++++.|.+. +.......+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 60 t~L~~A~~~~~~~~v~~Ll~~----------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 123 (223)
T 2f8y_A 60 TPLHAAVSADAQGVFQILIRN----------------RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 123 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHB----------------TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----------------CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC
Confidence 455666666777777766532 2222344567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 124 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 019914 322 HDVLKLLEKDAF 333 (334)
Q Consensus 322 ~e~v~~Ll~~~~ 333 (334)
.+++++|++++.
T Consensus 204 ~~i~~~L~~~g~ 215 (223)
T 2f8y_A 204 HDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHHTTC
T ss_pred hHHHHHHHHcCC
Confidence 999999999874
No 20
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.3e-26 Score=190.30 Aligned_cols=124 Identities=27% Similarity=0.387 Sum_probs=121.3
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 209 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 209 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
.|.||||+|+..|+.+++++|++.|.+++..|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 289 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 289 ~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999875
No 21
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=6.5e-26 Score=197.39 Aligned_cols=155 Identities=30% Similarity=0.337 Sum_probs=135.5
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCC-----
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK----- 236 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~----- 236 (334)
++...+...++.+.++.+.+..+ . ..+..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~~g---------------~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 68 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKFEG---------------C-EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPM 68 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTC---------------S-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHhcC---------------C-CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccc
Confidence 45556666777777776643221 1 22445788999999999999999999999999886
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccC-------------CCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q 019914 237 DEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK-------------NKNTALHYAAGYGRKECVALLLENGAAVT 303 (334)
Q Consensus 237 ~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~-------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~ 303 (334)
+..|..|+||||+|+..++.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 67788999999999999999999999999999998876 79999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHcCCHHHH----HHHhhcC
Q 019914 304 LQNMDGKTPIDVAKLNSQHDVL----KLLEKDA 332 (334)
Q Consensus 304 ~~d~~g~TpL~~A~~~g~~e~v----~~Ll~~~ 332 (334)
.+|..|+||||+|+..++.+++ ++|++++
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g 181 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYD 181 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC
Confidence 9999999999999999999988 9998875
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=6.8e-26 Score=197.25 Aligned_cols=159 Identities=22% Similarity=0.241 Sum_probs=137.4
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++..++...++.++++.|.+.-..... ......+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~~~~~~~------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 106 (232)
T 2rfa_A 39 TALHIAALYDNLEAAMVLMEAAPELVF------------EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARAT 106 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGG------------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCchhcc------------ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccC
Confidence 567777777888888877643210000 01133456899999999999999999999999999988765
Q ss_pred -------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHH----HHHHHcCCCC--
Q 019914 242 -------------EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECV----ALLLENGAAV-- 302 (334)
Q Consensus 242 -------------~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v----~~Ll~~ga~~-- 302 (334)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++ ++|+++|+++
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~ 186 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHL 186 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSS
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhh
Confidence 799999999999999999999999999999999999999999999999988 9999999988
Q ss_pred ----CccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 303 ----TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 303 ----~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+.+|..|+||||+|+..|+.+++++|++++
T Consensus 187 ~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 187 KSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp CCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred hhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 589999999999999999999999999875
No 23
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=3.9e-26 Score=189.68 Aligned_cols=126 Identities=33% Similarity=0.547 Sum_probs=121.4
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHc
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 286 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 286 (334)
...+.++||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 45578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 287 GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 287 g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 136 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999876
No 24
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=4.4e-26 Score=201.71 Aligned_cols=165 Identities=19% Similarity=0.153 Sum_probs=136.8
Q ss_pred ChHHHHHHh---cChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCC
Q 019914 162 GPSAMMKYW---NDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDE 238 (334)
Q Consensus 162 ~~~~~~~~~---~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 238 (334)
++..++... ++.++++.|.+.-...... ...... .....+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 45 t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~---~~~~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 45 TCLMKAVLNLQDGVNACIMPLLQIDKDSGNP---KPLVNA---QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp CHHHHHHHTCBTTBCTTHHHHHHHHHHTTCS---SCGGGC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHccccchHHHHHHHHhcCCcccch---hhhccc---ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 456666666 7777777776442110000 000000 0112346799999999999999999999999999999
Q ss_pred CCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCcccCCCChHHHHHHH--cCCHH-------HHH
Q 019914 239 EDSE-------------GRTALHFACGYGEVKCAQILLE---AGANVDALDKNKNTALHYAAG--YGRKE-------CVA 293 (334)
Q Consensus 239 ~d~~-------------g~t~Lh~A~~~~~~~~v~~Ll~---~ga~~n~~d~~g~TpLh~A~~--~g~~~-------~v~ 293 (334)
.+.. |+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+. .++.+ +++
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~ 198 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYD 198 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHH
Confidence 8876 9999999999999999999999 999999999999999999999 88888 999
Q ss_pred HHHHcCCCC-------CccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 294 LLLENGAAV-------TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 294 ~Ll~~ga~~-------~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|+++|+++ +.+|..|+||||+|+..|+.+++++|++++
T Consensus 199 ~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 199 GLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp HHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 999999999 999999999999999999999999999875
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=7.8e-26 Score=200.09 Aligned_cols=154 Identities=25% Similarity=0.337 Sum_probs=137.5
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+..++...++.++++.|.+. +....+..+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 92 t~L~~A~~~~~~~~v~~Ll~~----------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 155 (253)
T 1yyh_A 92 TPLHAAVSADAQGVFQILIRN----------------RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 155 (253)
T ss_dssp CHHHHHHHHTCHHHHHHHHHS----------------TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----------------CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC
Confidence 566666666777777766432 2222345577899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc
Q 019914 322 HDVLKLLEKD 331 (334)
Q Consensus 322 ~e~v~~Ll~~ 331 (334)
.+++++|.+.
T Consensus 236 ~~i~~~l~~~ 245 (253)
T 1yyh_A 236 HDIVRLLDLE 245 (253)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.7e-25 Score=194.48 Aligned_cols=154 Identities=29% Similarity=0.349 Sum_probs=115.8
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++...+...++.++++.|.+. + .+ .+..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 42 t~L~~A~~~g~~~~v~~Ll~~-g---------------~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 104 (231)
T 3aji_A 42 TALHWACSAGHTEIVEFLLQL-G---------------VP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ 104 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT-T---------------CC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHcCcHHHHHHHHHh-C---------------CC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC
Confidence 456666667777777766532 1 11 123456677888888888888888888888888777777
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 105 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 105 NGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC
Confidence 78888888888888888888888888888777778888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHhhcC
Q 019914 322 HDVLKLLEKDA 332 (334)
Q Consensus 322 ~e~v~~Ll~~~ 332 (334)
.+++++|++++
T Consensus 185 ~~~v~~Ll~~g 195 (231)
T 3aji_A 185 VEEAKFLVTQG 195 (231)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHCC
Confidence 88888887765
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=1.5e-25 Score=194.72 Aligned_cols=155 Identities=26% Similarity=0.317 Sum_probs=139.0
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+...+...++.+.++.+.... .......+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~----------------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 71 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILAD----------------KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHC----------------GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred chHHHHHHhCCHHHHHHHHHhc----------------hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC
Confidence 3455555666776666654322 223455678899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 72 AGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q 019914 322 HDVLKLLEKDA 332 (334)
Q Consensus 322 ~e~v~~Ll~~~ 332 (334)
.+++++|++++
T Consensus 152 ~~~v~~Ll~~g 162 (231)
T 3aji_A 152 LKMVHILLFYK 162 (231)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999999875
No 28
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.6e-25 Score=190.50 Aligned_cols=155 Identities=27% Similarity=0.344 Sum_probs=138.8
Q ss_pred CChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHH-HcCCCCCCC
Q 019914 161 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNAL-AAGADKDEE 239 (334)
Q Consensus 161 ~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll-~~g~~~~~~ 239 (334)
.++..++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|+ ..+++++..
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 102 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDR----------------GAD-INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKH 102 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccc
Confidence 3567777777788888877543 222 2345678999999999999999999999 566799999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCChHHHHHHHcCC-----HHHHHHHHHcCCCCCccCCCCCCHH
Q 019914 240 DSEGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHYAAGYGR-----KECVALLLENGAAVTLQNMDGKTPI 313 (334)
Q Consensus 240 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-a~~n~~d~~g~TpLh~A~~~g~-----~~~v~~Ll~~ga~~~~~d~~g~TpL 313 (334)
+..|+||||+|+..++.+++++|++.| ++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+|||
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 182 (201)
T 3hra_A 103 NRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAM 182 (201)
T ss_dssp CTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHH
Confidence 999999999999999999999999999 9999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHhhcC
Q 019914 314 DVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 314 ~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+|+..|+.+++++|+++|
T Consensus 183 ~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 183 DYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999986
No 29
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=1.4e-26 Score=182.17 Aligned_cols=119 Identities=31% Similarity=0.464 Sum_probs=110.0
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHc
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 286 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 286 (334)
+..+.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Q 019914 287 GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 328 (334)
Q Consensus 287 g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~L 328 (334)
++.+++++|+++|++++.+|..|+||||+|. ..+++++|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 9999999999999999999999999999994 44444444
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=2.1e-25 Score=193.29 Aligned_cols=157 Identities=27% Similarity=0.292 Sum_probs=137.7
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcC--CCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG--ADKDEE 239 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~~~~~~ 239 (334)
++..++...++.++++.|.+... ..+.....+..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~~~--------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 103 (228)
T 2dzn_A 38 IPLHWSVSFQAHEITSFLLSKME--------------NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKI 103 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTCT--------------TCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHhccc--------------cccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccC
Confidence 56666666777777777653310 02222235678999999999999999999999998 889999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHH
Q 019914 240 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVAKL 318 (334)
Q Consensus 240 d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpL~~A~~ 318 (334)
+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+.
T Consensus 104 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCCHHHHHHHh-hcC
Q 019914 319 NSQHDVLKLLE-KDA 332 (334)
Q Consensus 319 ~g~~e~v~~Ll-~~~ 332 (334)
.|+.+++++|+ +++
T Consensus 184 ~~~~~~v~~Ll~~~g 198 (228)
T 2dzn_A 184 EGHGDAAVLLVEKYG 198 (228)
T ss_dssp TTCHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHhcC
Confidence 99999999999 654
No 31
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2.1e-26 Score=204.12 Aligned_cols=126 Identities=20% Similarity=0.216 Sum_probs=120.4
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCC
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEED--------------SEGRTALHFACGYGEVKCAQILLE---AGANV 269 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~t~Lh~A~~~~~~~~v~~Ll~---~ga~~ 269 (334)
+..|.||||+|+..|+.+++++|++.|++++..+ ..|+||||+|+..|+.++|++|++ .|+++
T Consensus 90 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~ 169 (260)
T 3jxi_A 90 YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL 169 (260)
T ss_dssp SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC
Confidence 4479999999999999999999999999999998 689999999999999999999999 99999
Q ss_pred CcccCCCChHHHHHHHcCC---------HHHHHHHHHcCCCC-------CccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 270 DALDKNKNTALHYAAGYGR---------KECVALLLENGAAV-------TLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 270 n~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~ga~~-------~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|++++
T Consensus 170 ~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 248 (260)
T 3jxi_A 170 RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE 248 (260)
T ss_dssp TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999888 79999999999998 789999999999999999999999999875
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.3e-25 Score=198.64 Aligned_cols=154 Identities=25% Similarity=0.298 Sum_probs=139.7
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCC-CCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA-DKDEED 240 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d 240 (334)
++..++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|++.+. +++..+
T Consensus 59 t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 121 (253)
T 1yyh_A 59 TALHLAARYSRSDAAKRLLEA----------------SAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121 (253)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC
T ss_pred cHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 566777777788888777542 111 23456789999999999999999999999997 899999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 019914 241 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 320 (334)
Q Consensus 241 ~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g 320 (334)
..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcC
Q 019914 321 QHDVLKLLEKDA 332 (334)
Q Consensus 321 ~~e~v~~Ll~~~ 332 (334)
+.+++++|++++
T Consensus 202 ~~~~v~~Ll~~g 213 (253)
T 1yyh_A 202 SYETAKVLLDHF 213 (253)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHcC
Confidence 999999999986
No 33
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.4e-26 Score=195.99 Aligned_cols=124 Identities=20% Similarity=0.211 Sum_probs=115.6
Q ss_pred CCCCcHhHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC------HHHHHHHHHcCCCCCcccCCCC
Q 019914 208 NEDESIVHHTASVGDA----EGLKNALAAGADKDEEDSEGRTALHFACGYGE------VKCAQILLEAGANVDALDKNKN 277 (334)
Q Consensus 208 ~~g~t~Lh~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~------~~~v~~Ll~~ga~~n~~d~~g~ 277 (334)
..|+||||+|+..++. +++++|++.|++++.+|..|+||||+|+..++ .+++++|+++|+++|.+|..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 5699999999999975 58999999999999999999999999999987 6889999999999999999999
Q ss_pred -hHHHHHHHcC-----CHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 278 -TALHYAAGYG-----RKECVALLLE-NGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 278 -TpLh~A~~~g-----~~~~v~~Ll~-~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
||||+|+..+ +.+++++|++ +|++++.+|..|+||||+|+..|+.++|++|++.
T Consensus 116 ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 116 IVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp BCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred chHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 9999999954 3579999999 9999999999999999999999999999999863
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=9.5e-26 Score=201.54 Aligned_cols=127 Identities=20% Similarity=0.239 Sum_probs=121.0
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCCcHHHHHHHcCCHHHHHHHHH---cCCC
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS--------------EGRTALHFACGYGEVKCAQILLE---AGAN 268 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~--------------~g~t~Lh~A~~~~~~~~v~~Ll~---~ga~ 268 (334)
.+..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.++|++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 356899999999999999999999999999999886 79999999999999999999999 9999
Q ss_pred CCcccCCCChHHHHHHHcCC---------HHHHHHHHHcCCCCC-------ccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 269 VDALDKNKNTALHYAAGYGR---------KECVALLLENGAAVT-------LQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 269 ~n~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~ga~~~-------~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
++.+|..|+||||+|+..++ .+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++++
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 99999999999999999998 899999999999996 58999999999999999999999999876
No 35
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.3e-25 Score=200.47 Aligned_cols=154 Identities=23% Similarity=0.290 Sum_probs=135.7
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCC------
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGAD------ 235 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~------ 235 (334)
++..++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|++.|++
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~~----------------ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 109 (282)
T 1oy3_D 47 TALHLAAILGEASTVEKLYAA----------------GAG-VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDAS 109 (282)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------------TCC-SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-
T ss_pred CHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhH
Confidence 567777777788888777542 222 234567899999999999999999999998755
Q ss_pred -----------------------------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccC
Q 019914 236 -----------------------------------------KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK 274 (334)
Q Consensus 236 -----------------------------------------~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~ 274 (334)
++..+..|+||||+|+..|+.++|++|+++|++++.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 189 (282)
T 1oy3_D 110 DTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189 (282)
T ss_dssp ----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 667788999999999999999999999999999999986
Q ss_pred C-CChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 275 N-KNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 275 ~-g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 190 ~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 248 (282)
T 1oy3_D 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcC
Confidence 5 999999999999999999999999999999999999999999999999999999886
No 36
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=4.9e-26 Score=187.15 Aligned_cols=123 Identities=28% Similarity=0.343 Sum_probs=119.3
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 209 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 209 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
...|+||+|+..|+.+++++|++.|++++..+..|+||||+|+. ++.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46799999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 289 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 289 ~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 126 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999875
No 37
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1e-25 Score=183.93 Aligned_cols=122 Identities=31% Similarity=0.418 Sum_probs=117.7
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCH
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRK 289 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~ 289 (334)
..++||.|+..|+.+++++|++.|++++ .+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 3589999999999999999999999887 588999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 290 ECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 290 ~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999876
No 38
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=3.3e-25 Score=197.90 Aligned_cols=157 Identities=27% Similarity=0.340 Sum_probs=137.8
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++.+++...++.++++.|.+.-. .....+..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~--------------~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 76 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSA--------------GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER 76 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHT--------------TSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHhcCC--------------CcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 46666667777777777654321 1112355678899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCcccC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGAN-----------------------------------------------VDALDK 274 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~-----------------------------------------------~n~~d~ 274 (334)
.|+||||+|+..++.+++++|++.|++ ++.+|.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence 999999999999999999999998765 778899
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 275 NKNTALHYAAGYGRKECVALLLENGAAVTLQNMD-GKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 275 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.|+||||+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.++|++|++++
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 215 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG 215 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999865 999999999999999999999876
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=2.4e-25 Score=192.43 Aligned_cols=139 Identities=25% Similarity=0.285 Sum_probs=114.5
Q ss_pred chhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 019914 193 TSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA-DKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDA 271 (334)
Q Consensus 193 ~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~ 271 (334)
..+...+.+. +..+..|.||||+|+..|+.+++++|++.+. +++..+..|+||||+|+..++.+++++|++.|++++.
T Consensus 42 ~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 120 (223)
T 2f8y_A 42 KRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120 (223)
T ss_dssp HHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC
Confidence 3344445443 3456778888888888888888888888876 7777888888888888888888888888888888888
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 272 LDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 272 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 181 (223)
T 2f8y_A 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181 (223)
T ss_dssp BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 8888888888888888888888888888888888888888888888888888888888875
No 40
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.3e-26 Score=204.94 Aligned_cols=148 Identities=30% Similarity=0.409 Sum_probs=131.4
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
+|..++...++.++++.|.+. +.+ ....+..|.||+|+|+..++.+++++|++.|++++.+|.
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~----------------~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~ 150 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKH----------------GAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL 150 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred CHHHHHHHcCcHHHHHHHHhc----------------CCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC
Confidence 567777777788888776532 222 234567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|+.+++
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988775
Q ss_pred HHHHHHH
Q 019914 322 HDVLKLL 328 (334)
Q Consensus 322 ~e~v~~L 328 (334)
++++|
T Consensus 231 --i~~lL 235 (269)
T 4b93_B 231 --IMELL 235 (269)
T ss_dssp --HHHHT
T ss_pred --HHHHH
Confidence 44444
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=4.6e-25 Score=191.19 Aligned_cols=155 Identities=21% Similarity=0.251 Sum_probs=136.8
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcC--CCCCC-
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG--ADKDE- 238 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g--~~~~~- 238 (334)
.+...+...++.+.++.+.+. +.+.....+..|.||||+|+..|+.+++++|++.| ++++.
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~----------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 67 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHS----------------KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY 67 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH----------------CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGC
T ss_pred cHHHHHHHhCCHHHHHHHHhc----------------CccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc
Confidence 345555666777777766433 23344456788999999999999999999999999 55555
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 019914 239 EDSEGRTALHFACGYGEVKCAQILLEAG--ANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 316 (334)
Q Consensus 239 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g--a~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A 316 (334)
.+..|+||||+|+..++.+++++|+++| ++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 7789999999999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHhhcC
Q 019914 317 KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 317 ~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|++++
T Consensus 148 ~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHTTCHHHHHHHHTTT
T ss_pred HHcCCHHHHHHHHhcC
Confidence 9999999999999876
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=4.5e-25 Score=199.20 Aligned_cols=153 Identities=26% Similarity=0.361 Sum_probs=133.7
Q ss_pred hHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 019914 163 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 242 (334)
Q Consensus 163 ~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~ 242 (334)
+...+...++.+.++.|.+. +.+ .+..+..|.||||+||..|+.+++++|++.|++++..|..
T Consensus 43 ~l~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~ 105 (299)
T 1s70_B 43 VFLAACSSGDTEEVLRLLER----------------GAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE 105 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----------------CCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHc----------------CCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 34455556677777766432 222 2445778999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCcccC------------------------------------------------
Q 019914 243 GRTALHFACGYGEVKCAQILLEAGANVDALDK------------------------------------------------ 274 (334)
Q Consensus 243 g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~------------------------------------------------ 274 (334)
|+||||+|+..|+.++|++|+++|++++.+|.
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWL 185 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999887654
Q ss_pred ------------CCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 275 ------------NKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 275 ------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 186 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 255 (299)
T 1s70_B 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255 (299)
T ss_dssp HHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred hccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC
Confidence 4678899999999999999999999999999999999999999999999999999986
No 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.2e-25 Score=185.65 Aligned_cols=126 Identities=31% Similarity=0.472 Sum_probs=119.8
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
+..+.++||.|+..|+.+++++|++. +.+++..+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45688999999999999999999984 56788888999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 131 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG 131 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999876
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=200.89 Aligned_cols=155 Identities=26% Similarity=0.304 Sum_probs=138.8
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHH-----HcCCHHHHHHHHHcCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTA-----SVGDAEGLKNALAAGADK 236 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~g~~~ 236 (334)
++..++...++.++++.|.+. +....+..+..|.||||+|+ ..++.+++++|++.|.++
T Consensus 113 T~Lh~A~~~g~~~~v~~Ll~~----------------g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~ 176 (276)
T 4hbd_A 113 TALHYSVSHANFPVVQQLLDS----------------GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN 176 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT
T ss_pred CHHHHHHHCCCHHHHHHHHHC----------------CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc
Confidence 566666777777777766432 33234556788999999999 668899999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHH
Q 019914 237 DEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDV 315 (334)
Q Consensus 237 ~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpL~~ 315 (334)
+..+..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+
T Consensus 177 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~ 256 (276)
T 4hbd_A 177 AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMV 256 (276)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred HHHcCCHHHHHHHhhcC
Q 019914 316 AKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 316 A~~~g~~e~v~~Ll~~~ 332 (334)
|+..|+.+++++|+++.
T Consensus 257 A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 257 ALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHTCHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHhcc
Confidence 99999999999999875
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=6.5e-25 Score=186.69 Aligned_cols=129 Identities=26% Similarity=0.316 Sum_probs=123.3
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcccCCCChHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILL-EAGANVDALDKNKNTALHY 282 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll-~~ga~~n~~d~~g~TpLh~ 282 (334)
+..+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|+ ..+++++.+|..|.||||+
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~ 112 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIP 112 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHH
Confidence 456778999999999999999999999999999999999999999999999999999999 5678999999999999999
Q ss_pred HHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCC-----HHHHHHHhhcC
Q 019914 283 AAGYGRKECVALLLENG-AAVTLQNMDGKTPIDVAKLNSQ-----HDVLKLLEKDA 332 (334)
Q Consensus 283 A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~TpL~~A~~~g~-----~e~v~~Ll~~~ 332 (334)
|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|++++
T Consensus 113 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g 168 (201)
T 3hra_A 113 AAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG 168 (201)
T ss_dssp HHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC
Confidence 99999999999999998 9999999999999999999998 99999999876
No 46
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=2.5e-25 Score=186.35 Aligned_cols=125 Identities=26% Similarity=0.396 Sum_probs=118.1
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHc
Q 019914 208 NEDESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 286 (334)
Q Consensus 208 ~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 286 (334)
.++.++||.||..|+.+++++|++. +.+++..|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3578999999999999999999998 577999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 287 GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 287 g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 128 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG 128 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999876
No 47
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=1.6e-25 Score=186.12 Aligned_cols=123 Identities=29% Similarity=0.456 Sum_probs=118.1
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGAD-KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
+.++||+|+..|+.+++++|++.+.+ ++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 56899999999999999999999987 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 289 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 289 ~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999875
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=9e-26 Score=197.27 Aligned_cols=130 Identities=23% Similarity=0.283 Sum_probs=121.9
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccC-CC
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGAD------KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDK-NK 276 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~-~g 276 (334)
+..+..|.||||+|+..|+.+++++|++.|++ ++..+..|+||||+|+..++.+++++|+++|++++.++. .|
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 151 (236)
T 1ikn_D 72 ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 151 (236)
T ss_dssp CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 34567899999999999999999999999876 466778899999999999999999999999999999998 99
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcCC
Q 019914 277 NTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 333 (334)
Q Consensus 277 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~~ 333 (334)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++-
T Consensus 152 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 999999999999999999999999999999999999999999999999999999863
No 49
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=2.7e-26 Score=198.93 Aligned_cols=130 Identities=28% Similarity=0.360 Sum_probs=119.9
Q ss_pred hhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCChHHH
Q 019914 203 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNTALH 281 (334)
Q Consensus 203 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~-ga~~n~~d~~g~TpLh 281 (334)
....+..|.|+||+||..|+.+++++|++.|++++.+|..|+||||+||..|+.++|++|++. |++++.+|..|+||||
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 345567789999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 282 YAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 282 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.|++++
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999998765
No 50
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=6.6e-26 Score=190.95 Aligned_cols=127 Identities=39% Similarity=0.551 Sum_probs=119.4
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccc-CCCChHHHHHH
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYAA 284 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d-~~g~TpLh~A~ 284 (334)
.+..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.+| ..|+||||+|+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 34578999999999999999999999 99999999999999999999999999999999999999998 88999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc----------------CCHHHHHHHhhcCC
Q 019914 285 GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN----------------SQHDVLKLLEKDAF 333 (334)
Q Consensus 285 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~----------------g~~e~v~~Ll~~~~ 333 (334)
..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|.++-|
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~~~ 183 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 183 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHhhC
Confidence 99999999999999999999999999999988775 67889999988754
No 51
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.9e-26 Score=199.63 Aligned_cols=129 Identities=26% Similarity=0.283 Sum_probs=122.9
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
...+..+.|+||+|+..|+.+++++|++.|++++..|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 34466788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHH--HHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQN-MDGKTPIDVA--KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpL~~A--~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.+++++|++++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g 146 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE 146 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC
Confidence 99999999999999999999986 6999999999 9999999999999864
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=2.8e-25 Score=206.63 Aligned_cols=170 Identities=16% Similarity=0.204 Sum_probs=140.0
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCc-----hhhhhhCCCCCcHhHHHHHcC--CHHHHHHHHHcCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGA-----DEAEEVGNEDESIVHHTASVG--DAEGLKNALAAGA 234 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~g~ 234 (334)
.+..++...++.++++.|.+.... .+.+.......... -.....+..|.||||+|+..| +.+++++|++.|+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKE-RGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHH-HTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccc-cCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 566666677777777777654210 00000000000000 001125668999999999999 9999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Q 019914 235 DKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN-----VDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDG 309 (334)
Q Consensus 235 ~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~-----~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 309 (334)
+++..|..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g 244 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEH 244 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHcCCHHHHHHHhhcC
Q 019914 310 KTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 310 ~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+||||+|+..|+.++|++|++++
T Consensus 245 ~tpL~~A~~~g~~~~v~~Ll~~~ 267 (364)
T 3ljn_A 245 TVPLYLSVRAAMVLLTKELLQKT 267 (364)
T ss_dssp CCHHHHHHHTCCHHHHHHHHHHS
T ss_pred CCHHHHHHHhChHHHHHHHHHcC
Confidence 99999999999999999999875
No 53
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=8.5e-25 Score=194.36 Aligned_cols=126 Identities=23% Similarity=0.318 Sum_probs=89.0
Q ss_pred hhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHH
Q 019914 205 EVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 284 (334)
Q Consensus 205 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~ 284 (334)
..+..|.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 142 (261)
T 2xai_A 64 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 142 (261)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3455667777777777777777777777766654 334677777777777777777777777777777777777777777
Q ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 285 GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 285 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
..|+.+++++|+++|++++. +..|+||||+|+..++.+++++|++++
T Consensus 143 ~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 189 (261)
T 2xai_A 143 ENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFG 189 (261)
T ss_dssp HTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcC
Confidence 77777777777777777764 666777777777777777777777654
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=6.1e-26 Score=199.34 Aligned_cols=126 Identities=24% Similarity=0.258 Sum_probs=119.1
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHc
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 286 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 286 (334)
+..+.|+||+|+..|+.+++++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 36689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCC-CHHHHH--HHcCCHHHHHHHhhcC
Q 019914 287 GRKECVALLLENGAAVTLQNMDGK-TPIDVA--KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 287 g~~~~v~~Ll~~ga~~~~~d~~g~-TpL~~A--~~~g~~e~v~~Ll~~~ 332 (334)
|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|++++
T Consensus 114 ~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~ 162 (239)
T 1ycs_B 114 NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 162 (239)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhh
Confidence 999999999999999999998887 999999 7889999999999753
No 55
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=1.5e-24 Score=189.32 Aligned_cols=154 Identities=26% Similarity=0.323 Sum_probs=111.0
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCC----CCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGA----DKD 237 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~----~~~ 237 (334)
++..++...++.++++.|.+. +.+ ....+..|.||||+|+..|+.+++++|++.+. +++
T Consensus 48 t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 110 (241)
T 1k1a_A 48 TPLHLAVITTLPSVVRLLVTA----------------GAS-PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE 110 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----------------CCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 456666666777777766532 111 12335567777777777777777777777776 666
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccc-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 019914 238 EEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 316 (334)
Q Consensus 238 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d-~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A 316 (334)
..+..|+||||+|+..++.+++++|++.|++++.++ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 190 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 777777777777777777777777777777777777 6677777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHhhcC
Q 019914 317 KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 317 ~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|++++
T Consensus 191 ~~~~~~~~v~~Ll~~g 206 (241)
T 1k1a_A 191 SGRGLLPLVRTLVRSG 206 (241)
T ss_dssp HHHTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHhcC
Confidence 7777777777777764
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.2e-25 Score=196.41 Aligned_cols=130 Identities=28% Similarity=0.347 Sum_probs=123.4
Q ss_pred hhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCcccCCC
Q 019914 203 AEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGAN------VDALDKNK 276 (334)
Q Consensus 203 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~------~n~~d~~g 276 (334)
.+..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|++.|++ ++..|..|
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 117 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNG 117 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTC
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCC
Confidence 345677899999999999999999999999999999999999999999999999999999999876 57788899
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 277 NTALHYAAGYGRKECVALLLENGAAVTLQNM-DGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 277 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.++|++|++++
T Consensus 118 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g 174 (236)
T 1ikn_D 118 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG 174 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999999999999999999999998 9999999999999999999999876
No 57
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=2.2e-25 Score=197.13 Aligned_cols=127 Identities=21% Similarity=0.270 Sum_probs=118.8
Q ss_pred hCCCCCcHhHHHHHc---CCHHHHHHHHHcCCCCCC-----------CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 019914 206 VGNEDESIVHHTASV---GDAEGLKNALAAGADKDE-----------EDSEGRTALHFACGYGEVKCAQILLEAGANVDA 271 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~-----------~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~ 271 (334)
.+..|.||||+|+.. |+.+++++|++.|++++. .|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 578899999999999 999999999999987663 347899999999999999999999999999999
Q ss_pred ccCC-------------CChHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCCHHHHHHH--cCCHH-------HHH
Q 019914 272 LDKN-------------KNTALHYAAGYGRKECVALLLE---NGAAVTLQNMDGKTPIDVAKL--NSQHD-------VLK 326 (334)
Q Consensus 272 ~d~~-------------g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpL~~A~~--~g~~e-------~v~ 326 (334)
+|.. |+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ +++
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~ 198 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYD 198 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHH
Confidence 9886 9999999999999999999999 999999999999999999999 88888 999
Q ss_pred HHhhcC
Q 019914 327 LLEKDA 332 (334)
Q Consensus 327 ~Ll~~~ 332 (334)
+|++++
T Consensus 199 ~Ll~~g 204 (256)
T 2etb_A 199 GLLQMG 204 (256)
T ss_dssp HHHHHH
T ss_pred HHHHcC
Confidence 999864
No 58
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.2e-24 Score=188.26 Aligned_cols=158 Identities=25% Similarity=0.341 Sum_probs=138.5
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++..++...++.+.++.+.+.+. ..+ ...+..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~------------~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 77 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQ------------QGG-RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR 77 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHH------------HTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHH------------hcC-CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 45556666777777777654321 111 12244567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC----CCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHH
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGA----NVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVA 316 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga----~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpL~~A 316 (334)
.|+||||+|+..++.+++++|++.+. +++.+|..|+||||+|+..++.+++++|+++|++++..+ ..|+||||+|
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 99999999999999999999999987 899999999999999999999999999999999999999 8999999999
Q ss_pred HHcCCHHHHHHHhhcC
Q 019914 317 KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 317 ~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|++++
T Consensus 158 ~~~~~~~~v~~Ll~~g 173 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHG 173 (241)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHcC
Confidence 9999999999999876
No 59
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=2.2e-24 Score=188.07 Aligned_cols=126 Identities=25% Similarity=0.416 Sum_probs=81.3
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
+..|.||||+|+..|+.+++++|++.| .+++..+..|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+.
T Consensus 74 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 74 DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 445666666666666666666666665 5566666666666666666666666666666666666666666666666666
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++++
T Consensus 154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 200 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200 (237)
T ss_dssp HCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcC
Confidence 66666666666666666666666666666666666666666666554
No 60
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=3.8e-24 Score=186.61 Aligned_cols=154 Identities=25% Similarity=0.360 Sum_probs=138.7
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++..++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 13 t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 75 (237)
T 3b7b_A 13 SPLHAAAEAGHVDICHMLVQA----------------GAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA 75 (237)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT
T ss_pred CHHHHHHHcCcHHHHHHHHHc----------------CCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC
Confidence 456666677777777776532 111 234567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAG-ANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 320 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-a~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g 320 (334)
.|+||||+|+..++.+++++|++.| ++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 9999999999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhcC
Q 019914 321 QHDVLKLLEKDA 332 (334)
Q Consensus 321 ~~e~v~~Ll~~~ 332 (334)
+.+++++|++++
T Consensus 156 ~~~~~~~Ll~~g 167 (237)
T 3b7b_A 156 CVDIAEILLAAK 167 (237)
T ss_dssp CHHHHHHHHTTT
T ss_pred CHHHHHHHHHcC
Confidence 999999999876
No 61
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=7.6e-25 Score=178.96 Aligned_cols=121 Identities=26% Similarity=0.365 Sum_probs=116.6
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 210 DESIVHHTASVGDAEGLKNALAA-GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
+.|+||+|+..|+.+++++|++. +.+++..+..|+||||+ +..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46899999999999999999998 44899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 289 KECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 289 ~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999976
No 62
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.92 E-value=2.8e-24 Score=193.76 Aligned_cols=152 Identities=24% Similarity=0.285 Sum_probs=85.6
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++..++...++.++++.|.+.- .+ .+..+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 61 t~L~~Aa~~g~~~~v~~Ll~~g----------------~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 61 SPMHEAAIHGHQLSLRNLISQG----------------WA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT----------------CC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHCC----------------CC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 5666666677777777665421 11 123344555666666666666666666666666555555
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 321 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~ 321 (334)
.|+||||+|+..++.+++++|++.|++++..+ .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 55566665555555555555555555555422 35555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhhc
Q 019914 322 HDVLKLLEKD 331 (334)
Q Consensus 322 ~e~v~~Ll~~ 331 (334)
.+++++|+++
T Consensus 203 ~~~v~~Ll~~ 212 (285)
T 3d9h_A 203 RACVKKLLES 212 (285)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 5555555544
No 63
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=3.8e-25 Score=199.47 Aligned_cols=127 Identities=22% Similarity=0.229 Sum_probs=89.5
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+|+..|+.+++++|++.|++++..+ |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 3445667777777777777777777777777666653 67777777777777777777777777777777777777777
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDG-KTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g-~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|++++
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g 152 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI 152 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 77777777777777777777777777 57777777777777777776654
No 64
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.4e-25 Score=197.83 Aligned_cols=124 Identities=38% Similarity=0.538 Sum_probs=118.2
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccc-CCCChHHHHHHH
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYAAG 285 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d-~~g~TpLh~A~~ 285 (334)
+..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+||..|+.++|++|+++|++++.+| ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4568999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH----------------HcCCHHHHHHHhhc
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAK----------------LNSQHDVLKLLEKD 331 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~----------------~~g~~e~v~~Ll~~ 331 (334)
.|+.+++++|+++|++++.+|..|+||||+|+ ..|+.+++++|+++
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 99999999999999999999999999999888 66889999999875
No 65
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=3.7e-24 Score=190.25 Aligned_cols=122 Identities=29% Similarity=0.447 Sum_probs=92.3
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHc
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY 286 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~ 286 (334)
+..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++. |..|+||||+|+..
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~ 176 (261)
T 2xai_A 98 ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVART 176 (261)
T ss_dssp SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHc
Confidence 34577777777777777777777777777777777777777777777777777777777777774 67777777777777
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 287 GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 287 g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
++.+++++|+++|++++.+|..|+||||+|+..+ +++++|+++
T Consensus 177 ~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~ 219 (261)
T 2xai_A 177 ASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLER 219 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhc
Confidence 7777777777777777777777777777777544 367777664
No 66
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=6e-24 Score=195.33 Aligned_cols=90 Identities=30% Similarity=0.372 Sum_probs=72.6
Q ss_pred CCcHHHHHHHc---CCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 019914 243 GRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN 319 (334)
Q Consensus 243 g~t~Lh~A~~~---~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~ 319 (334)
|+||||+|+.. +..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 34444555444 234555556666666777888899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcC
Q 019914 320 SQHDVLKLLEKDA 332 (334)
Q Consensus 320 g~~e~v~~Ll~~~ 332 (334)
|+.++|++|++++
T Consensus 291 ~~~~~v~~Ll~~g 303 (351)
T 3utm_A 291 GHLQTCRLLLSYG 303 (351)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CcHHHHHHHHHcC
Confidence 9999999999875
No 67
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=9.3e-24 Score=188.22 Aligned_cols=164 Identities=24% Similarity=0.232 Sum_probs=137.9
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHc-CCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEED 240 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d 240 (334)
.+...+...++.++++.|.+.-. ... ............+..|.||||+|+..|+.+++++|++. |++++..|
T Consensus 107 t~L~~A~~~~~~~~~~~Ll~~g~-~~~------~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 179 (285)
T 1wdy_A 107 TAFMEAAVYGKVKALKFLYKRGA-NVN------LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179 (285)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTC-CTT------CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC
T ss_pred CHHHHHHHhCCHHHHHHHHHhCC-Ccc------cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 34555555666666666644311 000 00011122233477899999999999999999999998 99999999
Q ss_pred CCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHH
Q 019914 241 SEGRTALHFACGYGE----VKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLE-NGAAVTLQNMDGKTPIDV 315 (334)
Q Consensus 241 ~~g~t~Lh~A~~~~~----~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~TpL~~ 315 (334)
..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+
T Consensus 180 ~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~ 259 (285)
T 1wdy_A 180 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 259 (285)
T ss_dssp TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHH
Confidence 999999999999999 999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHcCCHHHHHHHhhcC
Q 019914 316 AKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 316 A~~~g~~e~v~~Ll~~~ 332 (334)
|+..|+.+++++|+++|
T Consensus 260 A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 260 AVELKLKKIAELLCKRG 276 (285)
T ss_dssp HHHTTCHHHHHHHHHHS
T ss_pred HHHcCcHHHHHHHHHcC
Confidence 99999999999999986
No 68
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=1.5e-24 Score=193.82 Aligned_cols=128 Identities=18% Similarity=0.199 Sum_probs=117.7
Q ss_pred hhCCCCCcHhHHHHHc---CCHHHHHHHHHcCCCC-----------CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 019914 205 EVGNEDESIVHHTASV---GDAEGLKNALAAGADK-----------DEEDSEGRTALHFACGYGEVKCAQILLEAGANVD 270 (334)
Q Consensus 205 ~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~-----------~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n 270 (334)
..+..|.||||+|+.. |+.+++++|++.|+++ ...|..|+||||+|+..|+.++|++|+++|++++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 3467899999999987 9999999999998642 2256789999999999999999999999999999
Q ss_pred cccC--------------CCChHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCCHHHHHHHcCC---------HHH
Q 019914 271 ALDK--------------NKNTALHYAAGYGRKECVALLLE---NGAAVTLQNMDGKTPIDVAKLNSQ---------HDV 324 (334)
Q Consensus 271 ~~d~--------------~g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpL~~A~~~g~---------~e~ 324 (334)
.++. .|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..|+ .++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~ 208 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHH
Confidence 9997 79999999999999999999999 999999999999999999999988 899
Q ss_pred HHHHhhcC
Q 019914 325 LKLLEKDA 332 (334)
Q Consensus 325 v~~Ll~~~ 332 (334)
+++|++++
T Consensus 209 v~~Ll~~g 216 (273)
T 2pnn_A 209 YNEILILG 216 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99999764
No 69
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=1.5e-24 Score=201.66 Aligned_cols=152 Identities=19% Similarity=0.251 Sum_probs=132.7
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHc----CCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA----GADKD 237 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----g~~~~ 237 (334)
++..++...++.++++.|.+.- . ......|.||||+|+..|+.+++++|++. |.+++
T Consensus 55 t~L~~A~~~g~~~~v~~Ll~~g----------------~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 115 (364)
T 3ljn_A 55 TALHLACKFGCVDTAKYLASVG----------------E---VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPE 115 (364)
T ss_dssp CHHHHHHHHCCHHHHHHHHHHC----------------C---CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCC----------------C---CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHH
Confidence 5667777777777777765432 1 11123688999999999999999999988 77766
Q ss_pred C-----------------CCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHc
Q 019914 238 E-----------------EDSEGRTALHFACGYG--EVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN 298 (334)
Q Consensus 238 ~-----------------~d~~g~t~Lh~A~~~~--~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 298 (334)
. .|..|+||||+|+..| +.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 195 (364)
T 3ljn_A 116 SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDT 195 (364)
T ss_dssp HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 5 7889999999999999 99999999999999999999999999999999999999999999
Q ss_pred CCC-----CCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 299 GAA-----VTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 299 ga~-----~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|++ ++.+|..|+||||+|+..|+.++|++|++++
T Consensus 196 g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 234 (364)
T 3ljn_A 196 VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG 234 (364)
T ss_dssp CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT
T ss_pred ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 998 9999999999999999999999999999876
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=1.5e-24 Score=194.67 Aligned_cols=130 Identities=20% Similarity=0.275 Sum_probs=123.7
Q ss_pred hhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCcccCCC
Q 019914 203 AEEVGNEDESIVHHTASVGDAEGLKNALAAGA-DKDEEDSEGRTALHFAC-----GYGEVKCAQILLEAGANVDALDKNK 276 (334)
Q Consensus 203 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~Lh~A~-----~~~~~~~v~~Ll~~ga~~n~~d~~g 276 (334)
.+..+..|.||||+|+..|+.+++++|++.|+ +++..+..|+||||+|+ ..++.+++++|++.|.+++..|..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 35567889999999999999999999999998 99999999999999999 5688999999999999999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhh-cC
Q 019914 277 NTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK-DA 332 (334)
Q Consensus 277 ~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~-~~ 332 (334)
+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++|++|++ ++
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999998 44
No 71
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=5.3e-24 Score=202.65 Aligned_cols=124 Identities=30% Similarity=0.405 Sum_probs=61.4
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcC
Q 019914 208 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYG 287 (334)
Q Consensus 208 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g 287 (334)
..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+.+|
T Consensus 243 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 322 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG 322 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcC
Confidence 34445555555555555555555444444444444444555544444444444444444444444444445555554444
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 288 RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 288 ~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
+.++|++|+++|++++.+|..|+||||+|+..|+.++|++|+++
T Consensus 323 ~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 366 (437)
T 1n11_A 323 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN 366 (437)
T ss_dssp CSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC
Confidence 44445544444444444444444555555444444454444443
No 72
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=1.4e-23 Score=187.01 Aligned_cols=130 Identities=26% Similarity=0.311 Sum_probs=123.3
Q ss_pred hhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHH
Q 019914 202 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 281 (334)
Q Consensus 202 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh 281 (334)
.....+..|.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 31 VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFM 110 (285)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHH
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHH
Confidence 33334677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCcc----------CCCCCCHHHHHHHcCCHHHHHHHhhc
Q 019914 282 YAAGYGRKECVALLLENGAAVTLQ----------NMDGKTPIDVAKLNSQHDVLKLLEKD 331 (334)
Q Consensus 282 ~A~~~g~~~~v~~Ll~~ga~~~~~----------d~~g~TpL~~A~~~g~~e~v~~Ll~~ 331 (334)
+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999999999987 78899999999999999999999976
No 73
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=4.1e-24 Score=192.60 Aligned_cols=128 Identities=29% Similarity=0.380 Sum_probs=122.4
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
...+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|++.|++++.+|..|+||||+|
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+..|+.+++++|+++|++++..+ .|+||||+|+..|+.+++++|++++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g 180 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYG 180 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 99999999999999999998655 5999999999999999999999875
No 74
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=5.7e-25 Score=202.23 Aligned_cols=136 Identities=18% Similarity=0.139 Sum_probs=122.8
Q ss_pred hcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcC-CCCCcc
Q 019914 197 NAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGE---VKCAQILLEAG-ANVDAL 272 (334)
Q Consensus 197 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~---~~~v~~Ll~~g-a~~n~~ 272 (334)
..+.++....+..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..|+ .++++.|++.+ ++++.+
T Consensus 118 ~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~ 197 (327)
T 1sw6_A 118 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197 (327)
T ss_dssp TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEE
T ss_pred hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCC
Confidence 33444433368899999999999999999999999999999999999999999999998 78888888886 789999
Q ss_pred cCCCChHHHHHHH----cCCHHHHHHHHHcCC---------------------------------------------CCC
Q 019914 273 DKNKNTALHYAAG----YGRKECVALLLENGA---------------------------------------------AVT 303 (334)
Q Consensus 273 d~~g~TpLh~A~~----~g~~~~v~~Ll~~ga---------------------------------------------~~~ 303 (334)
|..|+||||+|+. .|+.+++++|++.++ +++
T Consensus 198 d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n 277 (327)
T 1sw6_A 198 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 277 (327)
T ss_dssp CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTT
T ss_pred CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC
Confidence 9999999999999 899999999998743 588
Q ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 304 LQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 304 ~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
.+|..|+||||+|+..|+.++|++|++++
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G 306 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYG 306 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 89999999999999999999999999876
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=2.5e-24 Score=190.71 Aligned_cols=126 Identities=21% Similarity=0.208 Sum_probs=116.0
Q ss_pred CCCCCcHhHHHH---HcCCHHHHHHHHHcCCC-----------CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 019914 207 GNEDESIVHHTA---SVGDAEGLKNALAAGAD-----------KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDAL 272 (334)
Q Consensus 207 ~~~g~t~Lh~A~---~~g~~~~v~~Ll~~g~~-----------~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~ 272 (334)
+..|.||||+|+ ..|+.+++++|++.|++ ++..|..|+||||+||..|+.++|++|+++|++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 477999999999 67999999999998743 4555669999999999999999999999999999999
Q ss_pred c--------------CCCChHHHHHHHcCCHHHHHHHHH---cCCCCCccCCCCCCHHHHHHHcCC---------HHHHH
Q 019914 273 D--------------KNKNTALHYAAGYGRKECVALLLE---NGAAVTLQNMDGKTPIDVAKLNSQ---------HDVLK 326 (334)
Q Consensus 273 d--------------~~g~TpLh~A~~~g~~~~v~~Ll~---~ga~~~~~d~~g~TpL~~A~~~g~---------~e~v~ 326 (334)
| ..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+..++ .++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 9 689999999999999999999999 999999999999999999998887 79999
Q ss_pred HHhhcC
Q 019914 327 LLEKDA 332 (334)
Q Consensus 327 ~Ll~~~ 332 (334)
+|++++
T Consensus 203 ~Ll~~g 208 (260)
T 3jxi_A 203 LLLIKC 208 (260)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999864
No 76
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=8.3e-24 Score=197.87 Aligned_cols=129 Identities=26% Similarity=0.381 Sum_probs=121.8
Q ss_pred hhhCCCCCcHhHHHHHcC---CHHHHHHHHHcCCCCCC--------CCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCc
Q 019914 204 EEVGNEDESIVHHTASVG---DAEGLKNALAAGADKDE--------EDSEGRTALHFACGYGEVKCAQILLEAG-ANVDA 271 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g---~~~~v~~Ll~~g~~~~~--------~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-a~~n~ 271 (334)
+..+..|.||||+|+..+ +.+++++|++.|++++. .|..|+||||+|+..|+.++|++|++.+ ++++.
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~ 308 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 308 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC
Confidence 445788999999999998 89999999999999876 5678999999999999999999999886 99999
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 272 LDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 272 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|+.++|++|++++
T Consensus 309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999875
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.91 E-value=3e-24 Score=193.55 Aligned_cols=135 Identities=17% Similarity=0.138 Sum_probs=98.1
Q ss_pred hhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCcccC
Q 019914 196 DNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEG-RTALHFACGYGEVKCAQILLEAGANVDALDK 274 (334)
Q Consensus 196 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g-~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~ 274 (334)
...+.+. +..+..|.||||+|+..|+.+++++|++.|++++..+..| .||||+|+..++.+++++|+++|+++... .
T Consensus 82 l~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~ 159 (285)
T 3kea_A 82 LFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-A 159 (285)
T ss_dssp HHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-S
T ss_pred HHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-c
Confidence 3344443 3345567777777777777777777777777777777777 57777777777777777777777665222 2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH-HHHHHHcCCHHHHHHHhhcC
Q 019914 275 NKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTP-IDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 275 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp-L~~A~~~g~~e~v~~Ll~~~ 332 (334)
.|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|++++
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Confidence 67788888888888888888888888888888888887 88888888888888888765
No 78
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=1.1e-23 Score=193.52 Aligned_cols=154 Identities=31% Similarity=0.361 Sum_probs=133.5
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
++..++...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|++.|++++..|.
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~ 122 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQH----------------GAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL 122 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------TCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----------------CCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 577777777888888776542 222 244567899999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCccc------------------------------------------------
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALD------------------------------------------------ 273 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d------------------------------------------------ 273 (334)
.|+||||+|+..++.+++++|+++|++++..+
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (351)
T 3utm_A 123 WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEI 202 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhc
Confidence 99999999999999999999999999987654
Q ss_pred ------CCCChHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 274 ------KNKNTALHYAAGY---GRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 274 ------~~g~TpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
..|+||||+|+.. +..+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 203 ~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 203 INFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp TTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 4567899999998 5589999999999999999999999999999999999999999876
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=1.3e-24 Score=190.85 Aligned_cols=124 Identities=20% Similarity=0.149 Sum_probs=88.6
Q ss_pred CCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcC
Q 019914 208 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYG 287 (334)
Q Consensus 208 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g 287 (334)
..|.||||.|+..++.++++.|+++|++++.. ..|.||||+|+..|+.++|++|++.|++++.+|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 45899999999999999999999999999854 78899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 288 RKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 288 ~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 126 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999876
No 80
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=2e-23 Score=198.59 Aligned_cols=127 Identities=31% Similarity=0.370 Sum_probs=122.7
Q ss_pred hhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 204 EEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 204 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+.+|+.++|++|+++|+++|.+|..|+||||+|
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQA 351 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhh
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 330 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~ 330 (334)
+..|+.++|++|+++|++++.+|.+|+|||++|...|+.+++++|..
T Consensus 352 ~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 352 AQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999864
No 81
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=2.7e-23 Score=191.19 Aligned_cols=164 Identities=24% Similarity=0.227 Sum_probs=121.3
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHH-cCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALA-AGADKDEED 240 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~d 240 (334)
++...+...++.+++..+.+.- .... ............+..|.||||+|+..|+.++|++||+ .|++++.+|
T Consensus 127 t~l~~A~~~~~~~~~~~ll~~g-a~~~------~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d 199 (337)
T 4g8k_A 127 TAFMEAAVYGKVKALKFLYKRG-ANVN------LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 199 (337)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTT-CCTT------CCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred CHHHHHHHcCcHHHHHHHHHcC-CCcc------hhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence 3555556666777776654431 1100 0111112223446678899999999999999999985 588888888
Q ss_pred CCCCcHHHHHHHcCC----HHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHH
Q 019914 241 SEGRTALHFACGYGE----VKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDV 315 (334)
Q Consensus 241 ~~g~t~Lh~A~~~~~----~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~TpL~~ 315 (334)
..|+|+||+++..++ ..++++|+++|+++|.+|..|+||||+|+..|+.+++++|++. |++++.+|.+|+||||+
T Consensus 200 ~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~ 279 (337)
T 4g8k_A 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 279 (337)
T ss_dssp TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHH
T ss_pred CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHH
Confidence 888888888776543 3577888888888888888888888888888888888888875 78888888888888888
Q ss_pred HHHcCCHHHHHHHhhcC
Q 019914 316 AKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 316 A~~~g~~e~v~~Ll~~~ 332 (334)
|+..|+.++|++|+++|
T Consensus 280 A~~~g~~~iv~~Ll~~G 296 (337)
T 4g8k_A 280 AVELKLKKIAELLCKRG 296 (337)
T ss_dssp HHHTTCHHHHHHHHTTS
T ss_pred HHHcCCHHHHHHHHHCC
Confidence 88888888888888875
No 82
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.5e-23 Score=188.57 Aligned_cols=122 Identities=29% Similarity=0.407 Sum_probs=115.9
Q ss_pred CcHhHHHHHcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCcccCCCChHHH
Q 019914 211 ESIVHHTASVGDAEGLKNALAAGADKD------EEDSEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTALH 281 (334)
Q Consensus 211 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~------~~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~ga~~n~~d~~g~TpLh 281 (334)
.++|+.|+..|+.+.+..++..|++++ ..+..|+||||+|+.. ++.+++++|+++|+++|.+|..|+||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 468999999999999999999999854 4478999999999999 8999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 282 YAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 282 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999864
No 83
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=3.6e-23 Score=179.97 Aligned_cols=154 Identities=31% Similarity=0.384 Sum_probs=135.6
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+..++...++.++++.|.+. +.+ ....+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 140 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKY----------------GAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQ 140 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ChhHHHHHcCCHHHHHHHHHc----------------CCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCC
Confidence 455666666777777766532 111 233567799999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCC-HHHHHHHHHcCCCCCcccC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 019914 242 EGRTALHFACGYGE-VKCAQILLEAGANVDALDK-NKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN 319 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~-~~~v~~Ll~~ga~~n~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~ 319 (334)
.|.||||+|+..++ .+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..
T Consensus 141 ~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 141 NGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp TSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 99999999997665 8999999999999999997 899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcC
Q 019914 320 SQHDVLKLLEKDA 332 (334)
Q Consensus 320 g~~e~v~~Ll~~~ 332 (334)
|+.+++++|++++
T Consensus 221 ~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 221 KNVWMINHLQEAR 233 (240)
T ss_dssp TCHHHHHHHHHHC
T ss_pred CcHHHHHHHHHhh
Confidence 9999999999875
No 84
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=1.4e-23 Score=195.77 Aligned_cols=125 Identities=24% Similarity=0.358 Sum_probs=120.0
Q ss_pred CCCCcHhHHHHHc-CCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHH
Q 019914 208 NEDESIVHHTASV-GDAEGLKNALAAGADKDEED--SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA 284 (334)
Q Consensus 208 ~~g~t~Lh~A~~~-g~~~~v~~Ll~~g~~~~~~d--~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~ 284 (334)
..+.|+||+|+.. ++.+++++|++.|++++..+ ..|+||||+|+..++.++|++|+++|+++|.+|..|+||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456899999999 99999999999999999988 89999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 285 GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 285 ~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++.+
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999998653
No 85
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.8e-23 Score=190.23 Aligned_cols=123 Identities=28% Similarity=0.432 Sum_probs=117.9
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCcccCCCChHH
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGADKDE------EDSEGRTALHFACGY---GEVKCAQILLEAGANVDALDKNKNTAL 280 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~------~d~~g~t~Lh~A~~~---~~~~~v~~Ll~~ga~~n~~d~~g~TpL 280 (334)
..++|+.|+..|+.+.++.|+..|++++. .+..|+||||+|+.. ++.+++++|+++|+++|.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45789999999999999999999999988 688999999999997 899999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 281 HYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 281 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999754
No 86
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.90 E-value=7.1e-23 Score=178.07 Aligned_cols=155 Identities=24% Similarity=0.280 Sum_probs=136.4
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+..++...++.++++.|.+. +.+.....+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~----------------~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 107 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISK----------------GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG 107 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----------------TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHhCCHHHHHHHHHc----------------CCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 455666666777777766532 2233334455689999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC-HHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Q 019914 242 EGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR-KECVALLLENGAAVTLQNM-DGKTPIDVAKLN 319 (334)
Q Consensus 242 ~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~-~~~v~~Ll~~ga~~~~~d~-~g~TpL~~A~~~ 319 (334)
.|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++ .+++++|++.|++++..+. .|+||||+|+..
T Consensus 108 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~ 187 (240)
T 3eu9_A 108 EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLA 187 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHc
Confidence 99999999999999999999999999999999999999999997776 8999999999999999997 999999999999
Q ss_pred CCHHHHHHHhhcC
Q 019914 320 SQHDVLKLLEKDA 332 (334)
Q Consensus 320 g~~e~v~~Ll~~~ 332 (334)
|+.+++++|++++
T Consensus 188 ~~~~~v~~Ll~~g 200 (240)
T 3eu9_A 188 GNTTVISLLLEAG 200 (240)
T ss_dssp TCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcC
Confidence 9999999999876
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=2.1e-23 Score=202.47 Aligned_cols=123 Identities=28% Similarity=0.429 Sum_probs=118.1
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCCcccCCCChHH
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGADKDEE------DSEGRTALHFACG---YGEVKCAQILLEAGANVDALDKNKNTAL 280 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~------d~~g~t~Lh~A~~---~~~~~~v~~Ll~~ga~~n~~d~~g~TpL 280 (334)
..+.||.|+..|+.+.++.|++.|++++.. +..|+||||+||. .|+.++|++||++|+++|.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 346799999999999999999999999877 8899999999976 8999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 281 HYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 281 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 263 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999876
No 88
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.7e-23 Score=155.21 Aligned_cols=90 Identities=47% Similarity=0.691 Sum_probs=46.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Q 019914 243 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQH 322 (334)
Q Consensus 243 g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~ 322 (334)
|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHhhcC
Q 019914 323 DVLKLLEKDA 332 (334)
Q Consensus 323 e~v~~Ll~~~ 332 (334)
+++++|++++
T Consensus 82 ~~~~~Ll~~g 91 (93)
T 1n0q_A 82 EVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 5555555443
No 89
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.90 E-value=9e-24 Score=190.65 Aligned_cols=125 Identities=32% Similarity=0.450 Sum_probs=120.3
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
.+..+.|+||+||..|+.++|++|++.|++++..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHhh
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 330 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~e~v~~Ll~ 330 (334)
.|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+.
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 999999999999999999999999999999999999999998875
No 90
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=4.3e-23 Score=154.05 Aligned_cols=93 Identities=46% Similarity=0.621 Sum_probs=89.6
Q ss_pred CCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCC
Q 019914 209 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGR 288 (334)
Q Consensus 209 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~ 288 (334)
+|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 019914 289 KECVALLLENGAA 301 (334)
Q Consensus 289 ~~~v~~Ll~~ga~ 301 (334)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 91
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=5.2e-23 Score=192.47 Aligned_cols=154 Identities=29% Similarity=0.344 Sum_probs=135.5
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcC---CCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG---ADKDE 238 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g---~~~~~ 238 (334)
++..++...++.++++.|.+. +.+. +..+..|.||||+|+..|+.+++++|++.+ ++++.
T Consensus 168 TpL~~A~~~g~~~iv~~Ll~~----------------ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (373)
T 2fo1_E 168 TPLMLAVLARRRRLVAYLMKA----------------GADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE 230 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------------TCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC
T ss_pred CHHHHHHHcChHHHHHHHHHC----------------CCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh
Confidence 566667777777777776532 2222 345678999999999999999999999988 79999
Q ss_pred CCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCc--------ccCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCccC
Q 019914 239 EDSEGRTALHFACGYG---EVKCAQILLEAGANVDA--------LDKNKNTALHYAAGYGRKECVALLLENG-AAVTLQN 306 (334)
Q Consensus 239 ~d~~g~t~Lh~A~~~~---~~~~v~~Ll~~ga~~n~--------~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d 306 (334)
.|..|+||||+|+..+ +.+++++|+++|++++. +|..|+||||+|+..|+.++|++|++++ ++++.+|
T Consensus 231 ~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d 310 (373)
T 2fo1_E 231 LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD 310 (373)
T ss_dssp CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC
T ss_pred cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC
Confidence 9999999999999998 89999999999999986 6778999999999999999999999885 9999999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 307 MDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 307 ~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
..|+||||+|+..|+.++|++|++++
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~g 336 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQG 336 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999876
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=2.1e-22 Score=185.16 Aligned_cols=150 Identities=25% Similarity=0.252 Sum_probs=127.4
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCC----HHHHHHHHHcCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD----AEGLKNALAAGADKD 237 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~~~~ 237 (334)
++..++...++.++++.|.... +.+ .+..+..|.|+||+++..+. ..++++|+++|++++
T Consensus 170 T~L~~A~~~g~~~~v~~LL~~~---------------gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n 233 (337)
T 4g8k_A 170 TALMDAAEKGHVEVLKILLDEM---------------GAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 233 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHS---------------CCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT
T ss_pred cHHHHHHHCCCHHHHHHHHhcc---------------CCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC
Confidence 3555556666666666654332 222 24567789999998887543 357899999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 019914 238 EEDSEGRTALHFACGYGEVKCAQILLEA-GANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 316 (334)
Q Consensus 238 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~-ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A 316 (334)
.+|..|+||||+|+..++.+++++|+.. |++++.+|..|+||||+|+..|+.++|++|+++|++++.+ ||||+|
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A 308 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTA 308 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHH
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHH
Confidence 9999999999999999999999999985 8999999999999999999999999999999999998754 599999
Q ss_pred HHcCCHHHHHHHhhcC
Q 019914 317 KLNSQHDVLKLLEKDA 332 (334)
Q Consensus 317 ~~~g~~e~v~~Ll~~~ 332 (334)
+.+|+.++|++|+++|
T Consensus 309 ~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 309 RRNYDHSLVKVLLSHG 324 (337)
T ss_dssp HHTTCHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHCc
Confidence 9999999999999986
No 93
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=3.3e-23 Score=160.70 Aligned_cols=108 Identities=32% Similarity=0.464 Sum_probs=102.4
Q ss_pred hCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHH
Q 019914 206 VGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAG 285 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~ 285 (334)
.+..|.|+||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHH
Q 019914 286 YGRKECVALLLENGAAVTLQNMDGKTPI 313 (334)
Q Consensus 286 ~g~~~~v~~Ll~~ga~~~~~d~~g~TpL 313 (334)
.++.+++++|+++|++++.++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999884
No 94
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=7.2e-23 Score=167.66 Aligned_cols=137 Identities=19% Similarity=0.158 Sum_probs=105.6
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDS 241 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~ 241 (334)
.+..++...++.++++.|.+. +.+ .+..+..|.||||+|+ .|+.+++++|++.|++++.+|.
T Consensus 14 t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~ 75 (156)
T 1bi7_B 14 DWLATAAARGRVEEVRALLEA----------------GAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP 75 (156)
T ss_dssp THHHHHHHHTCHHHHHHHHTT----------------TCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT
T ss_pred HHHHHHHHcCCHHHHHHHHHc----------------CCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC
Confidence 456666667777777776432 111 2345678999999985 9999999999999999999999
Q ss_pred CCCc-HHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Q 019914 242 EGRT-ALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA 316 (334)
Q Consensus 242 ~g~t-~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A 316 (334)
.|+| |||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||.+-+
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999 99999999999999999999999999999999999999999999999999999999999999999998743
No 95
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=3.3e-24 Score=187.36 Aligned_cols=148 Identities=19% Similarity=0.184 Sum_probs=126.0
Q ss_pred HHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 019914 164 SAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEG 243 (334)
Q Consensus 164 ~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g 243 (334)
...+...++.++++.|.+. +.+ .+..+..|.||||+|+..|+.+++++|++.|++++.+|..|
T Consensus 25 L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g 87 (229)
T 2vge_A 25 LLDAALTGELEVVQQAVKE----------------MND-PSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHG 87 (229)
T ss_dssp HHHHHHHTCHHHHHHHHHH----------------SSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HHHHHHcCCHHHHHHHHhc----------------CCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 3445556677777766532 122 23467789999999999999999999999999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCccc-CCCChHHHHH--HHcCCHHHHHHHHHcCCCC------------------
Q 019914 244 RTALHFACGYGEVKCAQILLEAGANVDALD-KNKNTALHYA--AGYGRKECVALLLENGAAV------------------ 302 (334)
Q Consensus 244 ~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d-~~g~TpLh~A--~~~g~~~~v~~Ll~~ga~~------------------ 302 (334)
+||||+|+..|+.+++++|++.|++++.++ ..|+||||+| +..|+.+++++|+++|+++
T Consensus 88 ~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~ 167 (229)
T 2vge_A 88 WTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEF 167 (229)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcc
Confidence 999999999999999999999999999997 6999999999 9999999999999986554
Q ss_pred --------------CccCCCCCCHHHHHHHcCCHHHHHHH
Q 019914 303 --------------TLQNMDGKTPIDVAKLNSQHDVLKLL 328 (334)
Q Consensus 303 --------------~~~d~~g~TpL~~A~~~g~~e~v~~L 328 (334)
+.+|..|+||||+|+..|+.++|+.+
T Consensus 168 ~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 168 GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred ccccCccccccccccccCCCcccHHHHHHHcCCcceeehh
Confidence 34577899999999999998887653
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=1.2e-21 Score=156.64 Aligned_cols=99 Identities=30% Similarity=0.417 Sum_probs=93.5
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Q 019914 233 GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTP 312 (334)
Q Consensus 233 g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~Tp 312 (334)
|+|+ .+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 5677 678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHhhcC
Q 019914 313 IDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 313 L~~A~~~g~~e~v~~Ll~~~ 332 (334)
||+|+..|+.+++++|++++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g 99 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYG 99 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999875
No 97
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=1e-22 Score=172.27 Aligned_cols=121 Identities=18% Similarity=0.148 Sum_probs=108.7
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHHcCCCCCcccCCCChHHHHHH
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGADKDEED-SEGRTALHFACGYGEV----KCAQILLEAGANVDALDKNKNTALHYAA 284 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~Lh~A~~~~~~----~~v~~Ll~~ga~~n~~d~~g~TpLh~A~ 284 (334)
+.++|+.|+..|+.+.++.++..+. +..+ ..|+||||+|+..++. +++++||++|+++|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4678999999999999999998874 4455 7799999999999975 5999999999999999999999999999
Q ss_pred HcCC------HHHHHHHHHcCCCCCccCCCCC-CHHHHHHHcC-----CHHHHHHHhh-cC
Q 019914 285 GYGR------KECVALLLENGAAVTLQNMDGK-TPIDVAKLNS-----QHDVLKLLEK-DA 332 (334)
Q Consensus 285 ~~g~------~~~v~~Ll~~ga~~~~~d~~g~-TpL~~A~~~g-----~~e~v~~Ll~-~~ 332 (334)
..++ .+++++|+++|++++.+|..|+ ||||+|+..+ +.+++++|++ ++
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g 144 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG 144 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC
Confidence 9987 6889999999999999999999 9999999954 4679999998 54
No 98
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=2.2e-22 Score=184.95 Aligned_cols=143 Identities=24% Similarity=0.213 Sum_probs=120.5
Q ss_pred CChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCC---HHHHHHHHHcC-CCC
Q 019914 161 GGPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGD---AEGLKNALAAG-ADK 236 (334)
Q Consensus 161 ~~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~g-~~~ 236 (334)
.++.+++...++.++++.|.+. |.++ +..+..|+||||+|+..|+ .++++.|++.+ +++
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~----------------Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~ 194 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKH----------------GSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 194 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT----------------TCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG
T ss_pred CcHHHHHHHcCCHHHHHHHHHc----------------CCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccc
Confidence 4677777888888888877532 2222 3567789999999999888 67788888876 678
Q ss_pred CCCCCCCCcHHHHHHH----cCCHHHHHHHHHcCC---------------------------------------------
Q 019914 237 DEEDSEGRTALHFACG----YGEVKCAQILLEAGA--------------------------------------------- 267 (334)
Q Consensus 237 ~~~d~~g~t~Lh~A~~----~~~~~~v~~Ll~~ga--------------------------------------------- 267 (334)
+.+|..|+||||+|+. .++.+++++|++.++
T Consensus 195 ~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~ 274 (327)
T 1sw6_A 195 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN 274 (327)
T ss_dssp GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHh
Confidence 8889999999999998 899999999987743
Q ss_pred CCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q 019914 268 NVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS 320 (334)
Q Consensus 268 ~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g 320 (334)
+++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|
T Consensus 275 ~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 58889999999999999999999999999999999999999999999998764
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=4.9e-22 Score=180.66 Aligned_cols=111 Identities=26% Similarity=0.356 Sum_probs=99.1
Q ss_pred hCCCCCcHhHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHH
Q 019914 206 VGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 282 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~ 282 (334)
.+..|.||||+|+.. ++.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 467899999999997 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Q 019914 283 AAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQH 322 (334)
Q Consensus 283 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~g~~ 322 (334)
|+..++.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 266 A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 9999999999999999886 589999999998864
No 100
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1.5e-21 Score=155.98 Aligned_cols=99 Identities=23% Similarity=0.278 Sum_probs=96.0
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCC
Q 019914 233 GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMD-GKT 311 (334)
Q Consensus 233 g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~T 311 (334)
+++++..+..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+. ++.+++++|+++|++++.+|.. |+|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 46889999999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHcCCHHHHHHHhhcC
Q 019914 312 PIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 312 pL~~A~~~g~~e~v~~Ll~~~ 332 (334)
|||+|+..|+.+++++|++++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~g 101 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAG 101 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999875
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=2.3e-20 Score=149.12 Aligned_cols=120 Identities=27% Similarity=0.305 Sum_probs=103.5
Q ss_pred hHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 019914 163 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 242 (334)
Q Consensus 163 ~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~ 242 (334)
+...+...++.++++.|.+. +.+ .+..+..|.|+||+|+..|+.+++++|++.|++++..|..
T Consensus 17 ~l~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 79 (136)
T 2jab_A 17 KLLEAARAGQDDEVRILMAN----------------GAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI 79 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHhCCHHHHHHHHHc----------------CCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 33444556666666666432 222 2445678999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcC
Q 019914 243 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENG 299 (334)
Q Consensus 243 g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 299 (334)
|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999876
No 102
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=3.8e-20 Score=144.74 Aligned_cols=122 Identities=40% Similarity=0.513 Sum_probs=107.1
Q ss_pred hHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 019914 163 PSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSE 242 (334)
Q Consensus 163 ~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~ 242 (334)
+...+...++.++++.|.+.- . ..+..+..|.||||+|+..++.+++++|++.|++++.+|..
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~~----------------~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 67 (126)
T 1n0r_A 5 PLHLAARNGHLEVVKLLLEAG----------------A-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN 67 (126)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT----------------C-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred HHHHHHHcCcHHHHHHHHHcC----------------C-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC
Confidence 445555667777777765431 1 12345678999999999999999999999999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q 019914 243 GRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAA 301 (334)
Q Consensus 243 g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~ 301 (334)
|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 68 g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 68 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999986
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=2.1e-22 Score=188.31 Aligned_cols=125 Identities=18% Similarity=0.149 Sum_probs=105.1
Q ss_pred CCCCCcHhHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CcccCCCChHH
Q 019914 207 GNEDESIVHHTASVGDAEGLKNALAAGADK---DEEDSEGRTALHFACGYGEVKCAQILLEAGANV---DALDKNKNTAL 280 (334)
Q Consensus 207 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~---n~~d~~g~TpL 280 (334)
+..+.||||+|+..|+.+++++|++.|+.. +..+..|+||||+||..|+.++|++|+++|+++ +..+.. +|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 445679999999999999999999998732 234557889999999999999999999999762 333333 8999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHH-HcCCHHHHHHHhhcC
Q 019914 281 HYAAGYGRKECVALLLENGAAVTL--QNMDGKTPIDVAK-LNSQHDVLKLLEKDA 332 (334)
Q Consensus 281 h~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~TpL~~A~-~~g~~e~v~~Ll~~~ 332 (334)
|+|+..|+.++|++|+++|++++. .|..|+||||+|+ ..|+.++|++|++++
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 999999999999999999999887 8889999999999 999999999999754
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=4.1e-21 Score=148.76 Aligned_cols=95 Identities=41% Similarity=0.579 Sum_probs=92.4
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Q 019914 238 EEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 317 (334)
Q Consensus 238 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~ 317 (334)
.+|..|+||||+||..++.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHhhcC
Q 019914 318 LNSQHDVLKLLEKDA 332 (334)
Q Consensus 318 ~~g~~e~v~~Ll~~~ 332 (334)
..++.+++++|++++
T Consensus 84 ~~~~~~~~~~Ll~~g 98 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKG 98 (115)
T ss_dssp TTTCHHHHHHHHTTS
T ss_pred HCCCHHHHHHHHHcC
Confidence 999999999999876
No 105
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=1.6e-20 Score=147.26 Aligned_cols=93 Identities=24% Similarity=0.318 Sum_probs=88.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Q 019914 240 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLN 319 (334)
Q Consensus 240 d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~~ 319 (334)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhcC
Q 019914 320 SQHDVLKLLEKDA 332 (334)
Q Consensus 320 g~~e~v~~Ll~~~ 332 (334)
|+.+++++|++++
T Consensus 84 ~~~~~v~~Ll~~g 96 (123)
T 3aaa_C 84 GHVSCVKLLLSKG 96 (123)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcC
Confidence 9999999999876
No 106
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=1.4e-20 Score=144.91 Aligned_cols=90 Identities=40% Similarity=0.445 Sum_probs=56.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Q 019914 239 EDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKL 318 (334)
Q Consensus 239 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~~ 318 (334)
.|.+|+|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCHHHHHHH
Q 019914 319 NSQHDVLKLL 328 (334)
Q Consensus 319 ~g~~e~v~~L 328 (334)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 6666666655
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=9.1e-20 Score=140.39 Aligned_cols=94 Identities=30% Similarity=0.480 Sum_probs=86.6
Q ss_pred hhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHH
Q 019914 202 EAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALH 281 (334)
Q Consensus 202 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh 281 (334)
.....+.+|.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|..|+||||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q 019914 282 YAAGYGRKECVALL 295 (334)
Q Consensus 282 ~A~~~g~~~~v~~L 295 (334)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=1.1e-19 Score=176.16 Aligned_cols=105 Identities=27% Similarity=0.395 Sum_probs=91.9
Q ss_pred CCCCCcHhHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHH
Q 019914 207 GNEDESIVHHTAS---VGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYA 283 (334)
Q Consensus 207 ~~~g~t~Lh~A~~---~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A 283 (334)
+..|.||||+||. .|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 6789999999977 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Q 019914 284 AGYGRKECVALLLENGAAVTLQNMDGKTPIDVAK 317 (334)
Q Consensus 284 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~A~ 317 (334)
+..|+.+++++|+++|++++. ||+|++.
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHTTCHHHHHHHHHTCC-----------------
T ss_pred HHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999987 4666544
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=4.1e-21 Score=161.48 Aligned_cols=92 Identities=33% Similarity=0.410 Sum_probs=88.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHH
Q 019914 240 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQN-MDGKTPIDVAKL 318 (334)
Q Consensus 240 d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~TpL~~A~~ 318 (334)
+..|+||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578999999999999999999999 99999999999999999999999999999999999999998 899999999999
Q ss_pred cCCHHHHHHHhhcC
Q 019914 319 NSQHDVLKLLEKDA 332 (334)
Q Consensus 319 ~g~~e~v~~Ll~~~ 332 (334)
.|+.+++++|++++
T Consensus 120 ~~~~~~v~~Ll~~g 133 (183)
T 3deo_A 120 YVRPEVVEALVELG 133 (183)
T ss_dssp TTCHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHcC
Confidence 99999999999875
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=2.3e-19 Score=161.19 Aligned_cols=97 Identities=21% Similarity=0.356 Sum_probs=93.2
Q ss_pred hCCCCCcHhHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHH
Q 019914 206 VGNEDESIVHHTASV---GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHY 282 (334)
Q Consensus 206 ~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~ 282 (334)
.+..|.||||+|+.. |+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 367799999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCC
Q 019914 283 AAGYGRKECVALLLENGAAV 302 (334)
Q Consensus 283 A~~~g~~~~v~~Ll~~ga~~ 302 (334)
|+..|+.+++++|+++|++.
T Consensus 245 A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 245 AKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHTTCHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998753
No 111
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=1.6e-19 Score=156.21 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=101.2
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHc-CCCCCCCC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAA-GADKDEED 240 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~d 240 (334)
++..++...++.++++.|.+. +.+ .+..+..|.||||+||..|+.+++++|++. |++++.+|
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~----------------g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d 137 (222)
T 3ehr_A 75 NPLHEAAKRGNLSWLRECLDN----------------RVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN 137 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----------------TCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC
T ss_pred cccccccccCcHHHHHHHHhC----------------CCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC
Confidence 456666667777777766431 222 234567899999999999999999999999 99999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Q 019914 241 SEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGK 310 (334)
Q Consensus 241 ~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 310 (334)
..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..++.++++.|++.|+..+..+.+++
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999888776654
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=2e-21 Score=181.73 Aligned_cols=149 Identities=13% Similarity=0.092 Sum_probs=118.0
Q ss_pred ChHHHHHHhcChhhHHHHHHHhccccCCCccchhhhcCchhhhhhCCCCCcHhHHHHHcCCHHHHHHHHHcCCCC---CC
Q 019914 162 GPSAMMKYWNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADK---DE 238 (334)
Q Consensus 162 ~~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~---~~ 238 (334)
++...+...++.++++.|.+.-. ........+..|.||||+|+..|+.++|++|+++|+++ +.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga--------------~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i 159 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLT--------------SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI 159 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC----------------CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC--------------cHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc
Confidence 45555566667777666532210 00001123345778999999999999999999999763 22
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc--ccCCCChHHHHHH-HcCCHHHHHHHHHcCCCCCccCCCCCCHHHH
Q 019914 239 EDSEGRTALHFACGYGEVKCAQILLEAGANVDA--LDKNKNTALHYAA-GYGRKECVALLLENGAAVTLQNMDGKTPIDV 315 (334)
Q Consensus 239 ~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~--~d~~g~TpLh~A~-~~g~~~~v~~Ll~~ga~~~~~d~~g~TpL~~ 315 (334)
.+.. +||||+||..|+.++|++|+++|++++. +|..|+||||+|+ ..|+.++|++|+++|++ |.|||++
T Consensus 160 ~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~ 231 (376)
T 2aja_A 160 QAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIH 231 (376)
T ss_dssp SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHC
T ss_pred CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHH
Confidence 2223 9999999999999999999999999987 8999999999999 99999999999998753 8999999
Q ss_pred HHHcCCHHHHHHHhhcC
Q 019914 316 AKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 316 A~~~g~~e~v~~Ll~~~ 332 (334)
|+..|+.+++++|++++
T Consensus 232 Aa~~g~~evv~lL~~~g 248 (376)
T 2aja_A 232 EFEYGEKYVNPFIARHV 248 (376)
T ss_dssp TTTTTTTTHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcC
Confidence 99999999999999764
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=1.3e-18 Score=162.24 Aligned_cols=126 Identities=25% Similarity=0.262 Sum_probs=95.2
Q ss_pred hhhcCchhhhhh-CCCCCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccc
Q 019914 195 ADNAGADEAEEV-GNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALD 273 (334)
Q Consensus 195 ~~~~~~~~~~~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d 273 (334)
+...+.++.... +..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..++.++|++||++|++++.+|
T Consensus 219 LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d 298 (368)
T 3jue_A 219 ALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARD 298 (368)
T ss_dssp HHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcC
Confidence 344555543322 2789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcC---CCCCccCCCCCCHHHHHHHcC
Q 019914 274 KNKNTALHYAAGYGRKECVALLLENG---AAVTLQNMDGKTPIDVAKLNS 320 (334)
Q Consensus 274 ~~g~TpLh~A~~~g~~~~v~~Ll~~g---a~~~~~d~~g~TpL~~A~~~g 320 (334)
..|+||||+|+..++.+++++|+.++ .+....+..+.|+++++....
T Consensus 299 ~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 299 SEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99999999999999999999999875 444566778889999877654
No 114
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=1.4e-18 Score=152.89 Aligned_cols=119 Identities=28% Similarity=0.292 Sum_probs=99.4
Q ss_pred CCcHhHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCChHHHHHHHcCCH
Q 019914 210 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRK 289 (334)
Q Consensus 210 g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~ga~~n~~d~~g~TpLh~A~~~g~~ 289 (334)
+.+++.+++..|+.+.+..+...+.+ .+..|+||||+|+..|+.++|++|++ |+++|.+|..|+||||+|+..|+.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAAD---VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCCcccccccccccc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCH
Confidence 44455555555554443333332222 23578999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHhhcC
Q 019914 290 ECVALLLENGAAVTLQN-MDGKTPIDVAKLNSQHDVLKLLEKDA 332 (334)
Q Consensus 290 ~~v~~Ll~~ga~~~~~d-~~g~TpL~~A~~~g~~e~v~~Ll~~~ 332 (334)
++|++|+++|++++.++ ..|+||||+|+..|+.++|++|++++
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 134 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG 134 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 99999999999999998 88999999999999999999999875
No 115
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=95.03 E-value=0.02 Score=39.25 Aligned_cols=54 Identities=24% Similarity=0.437 Sum_probs=30.1
Q ss_pred hhhhhhhcCCchHHHHHHHHhcCCchHHHHHHHHHHhcCCCccCCCCCCCChhHHHHHHHHhcCchHHHHHHHhhc
Q 019914 58 FSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGN 133 (334)
Q Consensus 58 ~s~~~~~~~~~~~~~~a~~~~~~p~~~~~a~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~m~~P~~~~m~~~l~~ 133 (334)
-..+..+|+||.+ ..+++||.+.++.+.++. | | ..+...+.||.++.++++|..
T Consensus 10 ee~~~~~m~dPEi----~~im~DP~~~~~lq~~~~---N-----------P----~~~~k~~~nP~v~~~i~kl~~ 63 (71)
T 2llw_A 10 EETYQRAMKDPEV----AAIMQDPVMQSILQQAQQ---N-----------P----AALQEHMKNPEVFKKIQTLIA 63 (71)
T ss_dssp HHHHHHHHHSHHH----HHHHTCTHHHHHHHHHHH---C-----------H----HHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHH----HHHhCCHHHHHHHHHHHH---C-----------H----HHHHHHHhCHHHHHHHHHHHH
Confidence 3444556666653 234566655555555443 2 1 123335559999888887654
No 116
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=92.88 E-value=0.095 Score=34.81 Aligned_cols=20 Identities=10% Similarity=0.361 Sum_probs=13.2
Q ss_pred hhhcCCchHHHHHHHHhcCC
Q 019914 62 SGLLNDPSIKELAEQIAKDP 81 (334)
Q Consensus 62 ~~~~~~~~~~~~a~~~~~~p 81 (334)
+++|.||.++...+++++||
T Consensus 15 ~~~m~dP~~~~~lq~i~~NP 34 (62)
T 2lnm_A 15 AMAFQNPRVQAALMECSENP 34 (62)
T ss_dssp HHHTTSHHHHHHHHHHTTCG
T ss_pred HHHcCCHHHHHHHHHHHHCH
Confidence 45666666666666666666
No 117
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=86.47 E-value=1.4 Score=29.89 Aligned_cols=42 Identities=21% Similarity=0.484 Sum_probs=29.6
Q ss_pred HhhcCCCChhHHHHHhcCChHHHHHHhcChhhHHHHHHHhccc
Q 019914 144 KIKEDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMGLA 186 (334)
Q Consensus 144 ~l~~~p~~~~il~ei~~~~~~~~~~~~~d~~~~~~l~~~~~~~ 186 (334)
.+.+||.+..++..+.+ .|..+.+|+++|.+...+.+....+
T Consensus 24 ~im~DP~~~~~lq~~~~-NP~~~~k~~~nP~v~~~i~kl~~aG 65 (71)
T 2llw_A 24 AIMQDPVMQSILQQAQQ-NPAALQEHMKNPEVFKKIQTLIAAG 65 (71)
T ss_dssp HHHTCTHHHHHHHHHHH-CHHHHHHHHHSHHHHHHHHHHHHTT
T ss_pred HHhCCHHHHHHHHHHHH-CHHHHHHHHhCHHHHHHHHHHHHcc
Confidence 34566766666666554 3778889999999999887665443
No 118
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=78.15 E-value=1.3 Score=30.08 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=8.3
Q ss_pred HhcCCchHHHHHHHHH
Q 019914 77 IAKDPAFNSMAEQLQK 92 (334)
Q Consensus 77 ~~~~p~~~~~a~~l~~ 92 (334)
++++|.|.++-+.++.
T Consensus 28 ~~~DP~~~~~lq~i~~ 43 (71)
T 2llv_A 28 MMKDPQLVAKLIGYKQ 43 (71)
T ss_dssp HHHSCTHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHH
Confidence 4456666555555443
No 119
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=74.48 E-value=0.76 Score=36.96 Aligned_cols=22 Identities=9% Similarity=0.181 Sum_probs=17.9
Q ss_pred hhhhc-CCchHHHHHHHHhcCCc
Q 019914 61 MSGLL-NDPSIKELAEQIAKDPA 82 (334)
Q Consensus 61 ~~~~~-~~~~~~~~a~~~~~~p~ 82 (334)
|..|+ ++|+|.++.+.+.+||.
T Consensus 25 l~~L~~~~Pqf~qlRq~vqqNPq 47 (171)
T 2qsf_X 25 PGSIGLTVEDLLSLRQVVSGNPE 47 (171)
T ss_dssp ---CCCCHHHHHHHHHHHHTCGG
T ss_pred HHHHHhcCHHHHHHHHHHHHCHH
Confidence 45588 99999999999999994
No 120
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=68.20 E-value=3.6 Score=27.82 Aligned_cols=38 Identities=24% Similarity=0.444 Sum_probs=22.9
Q ss_pred cCCCChhHHHHHhcCChHHHHH-HhcChhhHHHHHHHhcc
Q 019914 147 EDPSLKPILDEIESGGPSAMMK-YWNDKDVLQKLGEAMGL 185 (334)
Q Consensus 147 ~~p~~~~il~ei~~~~~~~~~~-~~~d~~~~~~l~~~~~~ 185 (334)
++|++...+..+.+. |..+.+ |+.||.+...+...+++
T Consensus 30 ~DP~~~~~lq~i~~N-P~~i~~~~~~dPrv~~~l~~L~g~ 68 (71)
T 2llv_A 30 KDPQLVAKLIGYKQN-PQAIGQDLFTDPRLMTIMATLMGV 68 (71)
T ss_dssp HSCTHHHHHHHHHHS-CTTHHHHTTTCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHC-HHHHHHHHhhCcHHHHHHHHHHcC
Confidence 444444444443322 335667 89999999988766644
No 121
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=67.71 E-value=4 Score=26.70 Aligned_cols=37 Identities=30% Similarity=0.538 Sum_probs=22.9
Q ss_pred cCCCChhHHHHHhcCChHHHHHHhcChhhHHHHHHHhc
Q 019914 147 EDPSLKPILDEIESGGPSAMMKYWNDKDVLQKLGEAMG 184 (334)
Q Consensus 147 ~~p~~~~il~ei~~~~~~~~~~~~~d~~~~~~l~~~~~ 184 (334)
+||++...+..+.+ +|..+.+|++||.+...+.+.++
T Consensus 19 ~dP~~~~~lq~i~~-NP~~~~~~~~dP~v~~~~~~L~~ 55 (62)
T 2lnm_A 19 QNPRVQAALMECSE-NPMNIMKYQNDKEVMDVFNKISQ 55 (62)
T ss_dssp TSHHHHHHHHHHTT-CGGGHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-CHHHHHHHHhChHHHHHHHHHHH
Confidence 44444444444332 35577789999999887766554
No 122
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=47.90 E-value=35 Score=30.88 Aligned_cols=26 Identities=23% Similarity=0.505 Sum_probs=21.2
Q ss_pred hcCCchHHHHHHHHhcCCchHHHHHHHHHHhc
Q 019914 64 LLNDPSIKELAEQIAKDPAFNSMAEQLQKTLH 95 (334)
Q Consensus 64 ~~~~~~~~~~a~~~~~~p~~~~~a~~l~~~~~ 95 (334)
|-++|+|.+|.+.+.+|| +.|+..++
T Consensus 240 Lr~~pqf~~lR~~vq~nP------~~l~~~lq 265 (368)
T 1oqy_A 240 LRDQPQFQNMRQVIQQNP------ALLPALLQ 265 (368)
T ss_dssp HHHSHHHHHHHHSTTTCT------THHHHHHT
T ss_pred HhcChHHHHHHHHHHhCh------HHHHHHHH
Confidence 678999999999999999 66666555
No 123
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=35.56 E-value=14 Score=24.03 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=17.5
Q ss_pred hhhcCCchHHHHHHHHhcCCc
Q 019914 62 SGLLNDPSIKELAEQIAKDPA 82 (334)
Q Consensus 62 ~~~~~~~~~~~~a~~~~~~p~ 82 (334)
.-|.++|+|..+.+.+..||.
T Consensus 5 ~~Lr~~Pqf~~lR~~vq~NP~ 25 (61)
T 2f4m_B 5 EFLRNQPQFQQMRQIIQQNPS 25 (61)
T ss_dssp GGGTTCHHHHHHHHHHHHCGG
T ss_pred HHHHcChHHHHHHHHHHHCHH
Confidence 447899999999999988883
No 124
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=32.83 E-value=88 Score=28.67 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=36.9
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCC--------------CCCCCcHHHHHHHcCCHHHHHHHHHc
Q 019914 217 TASVGDAEGLKNALAAGADKDEE--------------DSEGRTALHFACGYGEVKCAQILLEA 265 (334)
Q Consensus 217 A~~~g~~~~v~~Ll~~g~~~~~~--------------d~~g~t~Lh~A~~~~~~~~v~~Ll~~ 265 (334)
.+..|+...|+..+..|.|++.+ -.-|.|.+|+|+...+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 34468888888888877665321 13589999999999999999888863
No 125
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=32.81 E-value=10 Score=25.59 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=17.3
Q ss_pred hhhcCCchHHHHHHHHhcCCc
Q 019914 62 SGLLNDPSIKELAEQIAKDPA 82 (334)
Q Consensus 62 ~~~~~~~~~~~~a~~~~~~p~ 82 (334)
.-|.++|+|.++.+.+..||.
T Consensus 7 ~~Lr~~Pqf~qlR~~vqqNP~ 27 (72)
T 1pve_A 7 EFLRNQPQFQQMRQIIQQNPS 27 (72)
T ss_dssp GGGTTCTTTTTHHHHHTTCGG
T ss_pred HHHHcChHHHHHHHHHHHCHH
Confidence 347899999999999988883
No 126
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=31.56 E-value=50 Score=26.01 Aligned_cols=89 Identities=16% Similarity=0.227 Sum_probs=52.0
Q ss_pred hhhhhhcCCchHHHHHHHHhcCCchHHHHHHHHHHhc----CCCccCCCCCCCChhHHHHHHHHhcCchHH-HHHHHhhc
Q 019914 59 SAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLH----GANAEESIPQFDTTQYYSTMQQVMQNPQFM-TMAERLGN 133 (334)
Q Consensus 59 s~~~~~~~~~~~~~~a~~~~~~p~~~~~a~~l~~~~~----~~~~~~~~~~~d~~~~~~~~~~~m~~P~~~-~m~~~l~~ 133 (334)
..|.+++.+-.+.++...+..=-.-.+|++++.+.|+ ..... .++++..|++.+++-.-. ..+.-+.+
T Consensus 59 GnL~~IlG~~SlTqL~nrL~~wlsQ~em~~qks~EFSD~~qTaL~e-------AQ~AtD~y~~Ainny~~Ads~~~~lek 131 (201)
T 3u0c_A 59 GNLIQILGEKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSE-------TEGLTRDYEKQINKLKNADSKIKDLEN 131 (201)
T ss_dssp HHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 4457889999999999988765588899999888773 22111 234455555555433222 11112333
Q ss_pred hhHHHHHHHHHhhc-CCCChhH
Q 019914 134 ALMQIEERMAKIKE-DPSLKPI 154 (334)
Q Consensus 134 ~~~~~e~~~~~l~~-~p~~~~i 154 (334)
-+.+.+.++..+.- +|....+
T Consensus 132 Kvn~aq~kLs~L~P~dP~Y~K~ 153 (201)
T 3u0c_A 132 KINQIQTRLSELDPESPEKKKL 153 (201)
T ss_dssp HHHHHHHHHHTSCSSCTTHHHH
T ss_pred HHHHHHHHHhcCCCCCCccccc
Confidence 44456666665532 5655443
No 127
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=27.40 E-value=42 Score=19.48 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=14.8
Q ss_pred HhHHHHHcCCHHHHHHHHH
Q 019914 213 IVHHTASVGDAEGLKNALA 231 (334)
Q Consensus 213 ~Lh~A~~~g~~~~v~~Ll~ 231 (334)
-+..||..|+++.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3568888999998888753
No 128
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.10 E-value=22 Score=26.98 Aligned_cols=8 Identities=25% Similarity=0.713 Sum_probs=0.0
Q ss_pred Chhhhhhh
Q 019914 57 DFSAMSGL 64 (334)
Q Consensus 57 ~~s~~~~~ 64 (334)
|+|+|.+|
T Consensus 157 d~~~~~~~ 164 (164)
T 3sz7_A 157 DLSSLASM 164 (164)
T ss_dssp --------
T ss_pred chhhhhcC
Confidence 99987664
No 129
>1kdx_B CREB; complex (transcription activator/CO-activator), protein- protein interaction, phosphoserine recognition; HET: SEP; NMR {Rattus norvegicus}
Probab=20.24 E-value=37 Score=18.22 Aligned_cols=23 Identities=26% Similarity=0.536 Sum_probs=16.7
Q ss_pred HHHHHHhhcCCCChhHHHHHhcC
Q 019914 139 EERMAKIKEDPSLKPILDEIESG 161 (334)
Q Consensus 139 e~~~~~l~~~p~~~~il~ei~~~ 161 (334)
..+.+.+.+.|.++.++.++++.
T Consensus 4 ~krr~iL~rrpSYrkIlndls~~ 26 (28)
T 1kdx_B 4 QKRREILSRRPSYRKILNDLSSD 26 (28)
T ss_dssp HHHHHHHTTSTHHHHHHHHHHHH
T ss_pred hhhhhhhhcCchHHHHHHhhccC
Confidence 34566778888888888877653
Done!