Query 019918
Match_columns 334
No_of_seqs 97 out of 107
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 09:02:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gl3_A Putative thiol:disulfid 95.8 0.21 7E-06 39.4 12.4 128 171-315 7-137 (152)
2 2lrt_A Uncharacterized protein 95.7 0.2 6.7E-06 40.5 12.3 128 173-315 15-143 (152)
3 3hcz_A Possible thiol-disulfid 95.5 0.063 2.2E-06 41.8 8.5 131 172-316 10-142 (148)
4 3eyt_A Uncharacterized protein 94.9 0.28 9.6E-06 38.9 10.5 129 181-315 16-147 (158)
5 3or5_A Thiol:disulfide interch 94.7 0.82 2.8E-05 36.2 12.9 130 172-315 13-146 (165)
6 4hde_A SCO1/SENC family lipopr 94.7 0.7 2.4E-05 38.6 13.0 131 181-316 20-166 (170)
7 2f9s_A Thiol-disulfide oxidore 94.6 1 3.5E-05 35.4 13.1 125 175-315 8-133 (151)
8 2gs3_A PHGPX, GPX-4, phospholi 94.2 0.68 2.3E-05 38.6 11.8 146 168-315 24-181 (185)
9 3raz_A Thioredoxin-related pro 94.1 0.63 2.2E-05 36.9 11.1 123 181-317 12-137 (151)
10 3kcm_A Thioredoxin family prot 94.0 0.83 2.8E-05 35.9 11.4 129 172-315 7-138 (154)
11 3fkf_A Thiol-disulfide oxidore 93.9 0.31 1.1E-05 37.8 8.6 136 167-315 5-144 (148)
12 2obi_A PHGPX, GPX-4, phospholi 93.9 1.2 4.2E-05 36.8 12.8 144 171-316 25-180 (183)
13 2lja_A Putative thiol-disulfid 93.8 0.38 1.3E-05 37.8 9.1 130 171-315 7-138 (152)
14 2l5o_A Putative thioredoxin; s 93.6 2 7E-05 33.6 13.1 129 173-316 8-137 (153)
15 3fw2_A Thiol-disulfide oxidore 93.5 0.43 1.5E-05 37.9 8.9 133 169-314 7-145 (150)
16 3eur_A Uncharacterized protein 93.4 1.2 4.3E-05 34.8 11.4 127 172-312 10-140 (142)
17 3drn_A Peroxiredoxin, bacterio 92.8 0.92 3.2E-05 36.7 10.2 117 172-304 7-129 (161)
18 2v1m_A Glutathione peroxidase; 92.8 2.4 8.3E-05 33.7 12.5 140 172-315 10-162 (169)
19 2ggt_A SCO1 protein homolog, m 92.8 2.9 0.0001 33.0 13.0 127 181-316 11-157 (164)
20 2jsy_A Probable thiol peroxida 92.7 0.28 9.7E-06 39.7 6.9 126 173-315 24-162 (167)
21 3kij_A Probable glutathione pe 92.7 1.9 6.5E-05 35.6 12.0 137 175-315 20-165 (180)
22 4evm_A Thioredoxin family prot 92.5 2.5 8.5E-05 31.6 12.0 129 176-315 5-134 (138)
23 2lrn_A Thiol:disulfide interch 92.5 3.2 0.00011 32.8 13.5 129 174-315 10-139 (152)
24 4fo5_A Thioredoxin-like protei 92.5 0.18 6E-06 39.8 5.2 130 172-315 12-143 (143)
25 3ewl_A Uncharacterized conserv 92.3 0.89 3.1E-05 35.3 9.1 126 175-314 9-138 (142)
26 2b7k_A SCO1 protein; metalloch 92.3 1.9 6.6E-05 36.5 11.9 132 174-314 22-173 (200)
27 3p7x_A Probable thiol peroxida 92.1 0.66 2.3E-05 37.9 8.4 123 176-316 29-164 (166)
28 3lor_A Thiol-disulfide isomera 92.0 0.52 1.8E-05 37.3 7.5 135 175-315 11-150 (160)
29 2b5x_A YKUV protein, TRXY; thi 91.8 2.2 7.5E-05 32.7 10.7 122 182-315 18-140 (148)
30 3cmi_A Peroxiredoxin HYR1; thi 91.4 0.68 2.3E-05 37.8 7.7 126 181-315 20-163 (171)
31 2p5q_A Glutathione peroxidase 91.1 4.8 0.00017 31.9 13.0 141 174-315 13-163 (170)
32 3zrd_A Thiol peroxidase; oxido 90.7 0.42 1.4E-05 41.2 6.1 122 176-315 61-199 (200)
33 3ha9_A Uncharacterized thiored 90.7 5.2 0.00018 31.9 12.3 135 169-316 13-160 (165)
34 1jfu_A Thiol:disulfide interch 90.6 4.2 0.00015 33.2 11.9 125 174-308 41-166 (186)
35 1lu4_A Soluble secreted antige 90.5 4.5 0.00016 30.5 11.6 120 177-315 8-131 (136)
36 2p31_A CL683, glutathione pero 90.4 3.9 0.00013 33.8 11.7 142 170-316 26-177 (181)
37 3lwa_A Secreted thiol-disulfid 90.4 6.1 0.00021 32.2 12.7 133 171-315 35-176 (183)
38 2vup_A Glutathione peroxidase- 90.3 2.8 9.5E-05 35.0 10.7 143 170-316 25-181 (190)
39 1xvw_A Hypothetical protein RV 90.3 0.53 1.8E-05 37.6 5.9 121 171-306 13-142 (160)
40 3hdc_A Thioredoxin family prot 89.3 3.5 0.00012 32.8 10.2 129 169-316 17-148 (158)
41 2rli_A SCO2 protein homolog, m 89.3 4.9 0.00017 32.0 11.0 133 176-317 9-161 (171)
42 3me7_A Putative uncharacterize 89.1 5.8 0.0002 32.6 11.7 133 175-317 10-159 (170)
43 3ztl_A Thioredoxin peroxidase; 89.0 0.48 1.6E-05 41.3 5.2 133 164-309 37-183 (222)
44 1psq_A Probable thiol peroxida 89.0 3 0.0001 33.8 9.7 123 176-315 25-160 (163)
45 3ia1_A THIO-disulfide isomeras 88.1 2.7 9.1E-05 33.0 8.6 130 170-316 8-140 (154)
46 3dwv_A Glutathione peroxidase- 88.1 1.6 5.4E-05 36.5 7.6 141 174-316 27-179 (187)
47 3gkn_A Bacterioferritin comigr 88.1 6.1 0.00021 31.5 10.9 114 178-307 20-146 (163)
48 3kh7_A Thiol:disulfide interch 87.7 7.2 0.00025 32.1 11.4 132 167-317 30-164 (176)
49 3erw_A Sporulation thiol-disul 87.2 5 0.00017 30.6 9.5 133 169-315 11-144 (145)
50 2i3y_A Epididymal secretory gl 86.7 6.4 0.00022 34.6 11.0 138 173-316 35-207 (215)
51 2r37_A Glutathione peroxidase 86.5 5.5 0.00019 34.6 10.4 135 173-316 17-189 (207)
52 2h30_A Thioredoxin, peptide me 86.4 4.8 0.00016 31.7 9.2 128 181-318 26-154 (164)
53 2a4v_A Peroxiredoxin DOT5; yea 86.2 2.8 9.5E-05 33.7 7.8 114 176-307 16-138 (159)
54 2yzh_A Probable thiol peroxida 86.1 2.2 7.5E-05 34.8 7.2 122 176-315 30-167 (171)
55 1xzo_A BSSCO, hypothetical pro 86.0 3.9 0.00013 32.7 8.6 137 173-315 13-167 (174)
56 2b1k_A Thiol:disulfide interch 86.0 8.2 0.00028 30.8 10.5 135 164-316 19-156 (168)
57 3ixr_A Bacterioferritin comigr 85.7 3.8 0.00013 34.0 8.7 60 174-234 32-94 (179)
58 2c0d_A Thioredoxin peroxidase 84.9 3 0.0001 36.6 8.0 139 164-316 22-180 (221)
59 4g2e_A Peroxiredoxin; redox pr 84.5 0.99 3.4E-05 37.0 4.4 119 181-315 18-153 (157)
60 1q98_A Thiol peroxidase, TPX; 84.4 3.1 0.00011 33.9 7.4 117 181-315 31-164 (165)
61 2hyx_A Protein DIPZ; thioredox 83.5 4.6 0.00016 38.5 9.1 122 181-314 70-193 (352)
62 3s9f_A Tryparedoxin; thioredox 83.0 17 0.0006 29.5 11.7 114 177-305 33-149 (165)
63 1zzo_A RV1677; thioredoxin fol 82.7 13 0.00044 27.7 11.6 122 175-315 7-130 (136)
64 1xvq_A Thiol peroxidase; thior 82.2 1.2 4E-05 36.9 4.0 127 175-319 26-167 (175)
65 2f8a_A Glutathione peroxidase 81.8 17 0.0006 31.2 11.5 141 173-316 26-203 (208)
66 2ywi_A Hypothetical conserved 81.6 20 0.00069 29.2 12.4 134 173-315 24-169 (196)
67 3qpm_A Peroxiredoxin; oxidored 81.4 1.5 5.1E-05 39.1 4.6 109 183-305 67-187 (240)
68 1kng_A Thiol:disulfide interch 81.4 17 0.00057 28.2 11.1 114 184-316 33-148 (156)
69 1n8j_A AHPC, alkyl hydroperoxi 79.9 9.5 0.00033 31.9 8.9 119 182-316 17-152 (186)
70 2i81_A 2-Cys peroxiredoxin; st 79.6 8.9 0.0003 33.1 8.9 120 182-315 38-175 (213)
71 2pn8_A Peroxiredoxin-4; thiore 76.6 7.1 0.00024 33.7 7.3 120 182-315 37-172 (211)
72 1tp9_A Peroxiredoxin, PRX D (t 76.4 29 0.00098 28.1 11.1 107 182-306 21-147 (162)
73 2k6v_A Putative cytochrome C o 74.1 27 0.00093 27.5 9.7 128 177-315 20-168 (172)
74 1qmv_A Human thioredoxin perox 73.5 11 0.00039 31.3 7.7 118 184-315 25-158 (197)
75 2wfc_A Peroxiredoxin 5, PRDX5; 72.4 25 0.00085 29.1 9.4 114 176-305 12-142 (167)
76 1i5g_A Tryparedoxin II; electr 72.3 31 0.0011 26.5 12.4 113 176-302 11-126 (144)
77 3u5r_E Uncharacterized protein 71.7 31 0.001 29.5 10.1 126 169-303 34-161 (218)
78 2bmx_A Alkyl hydroperoxidase C 71.5 7.4 0.00025 32.5 6.0 116 184-315 36-165 (195)
79 3tjj_A Peroxiredoxin-4; thiore 70.7 2.1 7.1E-05 38.8 2.5 112 182-307 80-203 (254)
80 1uul_A Tryparedoxin peroxidase 69.8 11 0.00036 31.8 6.6 119 184-315 27-160 (202)
81 1zye_A Thioredoxin-dependent p 63.9 11 0.00038 32.5 5.7 110 182-305 45-166 (220)
82 3uma_A Hypothetical peroxiredo 63.6 23 0.00079 30.1 7.6 52 182-234 43-101 (184)
83 3keb_A Probable thiol peroxida 62.2 25 0.00086 31.6 7.9 120 181-317 36-173 (224)
84 1nm3_A Protein HI0572; hybrid, 60.9 44 0.0015 28.7 9.0 120 182-317 19-164 (241)
85 1we0_A Alkyl hydroperoxide red 59.6 16 0.00056 29.9 5.8 106 185-306 23-139 (187)
86 4gqc_A Thiol peroxidase, perox 58.4 8.4 0.00029 31.8 3.8 121 181-317 19-157 (164)
87 1zof_A Alkyl hydroperoxide-red 57.9 25 0.00086 29.1 6.7 121 182-315 18-156 (198)
88 2h01_A 2-Cys peroxiredoxin; th 56.6 21 0.00073 29.4 6.0 111 182-305 17-140 (192)
89 3mng_A Peroxiredoxin-5, mitoch 50.8 1.1E+02 0.0037 25.6 10.8 59 175-234 23-88 (173)
90 2cvb_A Probable thiol-disulfid 49.5 1E+02 0.0035 24.8 10.7 122 172-303 12-134 (188)
91 1o8x_A Tryparedoxin, TRYX, TXN 47.5 94 0.0032 23.9 12.9 116 172-302 7-126 (146)
92 2ls5_A Uncharacterized protein 46.7 5.9 0.0002 31.4 0.0 113 176-307 16-136 (159)
93 1o73_A Tryparedoxin; electron 38.6 1.3E+02 0.0043 22.8 11.8 111 177-302 13-126 (144)
94 2amj_A Modulator of drug activ 33.0 1.8E+02 0.0061 24.8 8.3 79 193-277 11-97 (204)
95 3a2v_A Probable peroxiredoxin; 32.6 1.3E+02 0.0044 27.1 7.6 49 185-234 22-76 (249)
96 3nul_A Profilin I; cytoskeleto 25.0 47 0.0016 27.3 3.0 38 268-306 1-39 (130)
97 3sbc_A Peroxiredoxin TSA1; alp 24.8 99 0.0034 27.6 5.3 52 183-235 42-96 (216)
98 2lus_A Thioredoxion; CR-Trp16, 30.7 15 0.00053 27.9 0.0 119 177-309 8-131 (143)
99 1xcc_A 1-Cys peroxiredoxin; un 23.7 1.4E+02 0.0047 25.8 6.0 52 182-234 20-74 (220)
100 3sr0_A Adenylate kinase; phosp 22.9 21 0.00073 31.1 0.5 12 9-20 4-15 (206)
101 1acf_A Profilin I; protein bin 22.7 36 0.0012 27.7 1.8 33 269-304 2-34 (125)
102 2rrl_A FLIK, flagellar HOOK-le 22.3 2.2E+02 0.0074 25.0 6.9 39 195-234 112-151 (169)
103 3nec_A Profilin, inflammatory 21.7 77 0.0026 27.5 3.8 44 267-313 5-50 (166)
104 3umf_A Adenylate kinase; rossm 21.1 25 0.00086 31.2 0.6 13 8-20 32-44 (217)
No 1
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.77 E-value=0.21 Score=39.38 Aligned_cols=128 Identities=16% Similarity=0.224 Sum_probs=78.1
Q ss_pred hhcccceEEecCCceeehhhhcccceEEEEec-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHH
Q 019918 171 ESLSNLKLRVDEKKIISVNNLRGIARLVICSG-PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMK 249 (334)
Q Consensus 171 e~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~ 249 (334)
+.+-.+.+.- +++.+++.++++..-+|...+ .=.+....+...+.+.+.+.+.|+.||.|..+.+ .+...
T Consensus 7 ~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~--------~~~~~ 77 (152)
T 3gl3_A 7 DKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK--------TGDAM 77 (152)
T ss_dssp SBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS--------HHHHH
T ss_pred CcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC--------HHHHH
Confidence 3444555555 788999999998754444433 3355777777778888899999999999987531 22222
Q ss_pred HHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcH--HHHHhcC
Q 019918 250 EFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPW--NAFVAQL 315 (334)
Q Consensus 250 ~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW--~~lv~eL 315 (334)
++.......|. +..+.-. +-.+.-++. .-+.++.+..||+|+.+..|..++ .++.+.|
T Consensus 78 ~~~~~~~~~~~---~~~d~~~----~~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i 137 (152)
T 3gl3_A 78 KFLAQVPAEFT---VAFDPKG----QTPRLYGVK-GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQI 137 (152)
T ss_dssp HHHHHSCCCSE---EEECTTC----HHHHHTTCC-SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHH
T ss_pred HHHHHcCCCCc---eeECCcc----hhHHHcCCC-CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHH
Confidence 32222222222 2111110 111223552 358899999999999999998776 3554443
No 2
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=95.69 E-value=0.2 Score=40.52 Aligned_cols=128 Identities=10% Similarity=0.107 Sum_probs=78.9
Q ss_pred cccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 173 L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
+-.+.+.--+++.++|.++++..-+|...++ =..+...+...+.+.+++.+.|+.||-|..|.. .+...++
T Consensus 15 ~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~--------~~~~~~~ 86 (152)
T 2lrt_A 15 IIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD--------EHFWKTS 86 (152)
T ss_dssp SCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC--------HHHHHHH
T ss_pred CCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC--------HHHHHHH
Confidence 3444454456899999999986544443333 244666666667778888888999999988632 1222232
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
.. +-.|...- +.+.+..=+.+ .-++. .-+.++.+..||+|+.+..|..+|.+.+..+
T Consensus 87 ~~--~~~~~~~~-d~~~~~~~~~~---~~~v~-~~P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 87 AD--NLPWVCVR-DANGAYSSYIS---LYNVT-NLPSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp HT--TCSSEEEE-CSSGGGCHHHH---HHTCC-SCSEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred Hh--CCCceEEE-CCCCcchHHHH---HcCcc-cCceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 21 12332211 22222110111 22442 3578999999999999999999999987654
No 3
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=95.54 E-value=0.063 Score=41.80 Aligned_cols=131 Identities=15% Similarity=0.177 Sum_probs=75.4
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+.--+++.+++.++++..-+|...++ =.+....+...+.+.+.+.+.++.||.|..+.. .+...+
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~--------~~~~~~ 81 (148)
T 3hcz_A 10 KAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK--------DEEWLK 81 (148)
T ss_dssp BCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS--------SHHHHH
T ss_pred cCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC--------HHHHHH
Confidence 33444444456899999999886544443332 223444445555677788888999999988531 112222
Q ss_pred Hhhhhccc-eEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 251 FTRKRKRL-WQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 251 ~~~~~~~~-w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
+....... |.... +.+. . .+-.+.-++. .-+.++.+..||+|..+..|.+...++++++.
T Consensus 82 ~~~~~~~~~~~~~~-d~~~--~--~~~~~~~~i~-~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~ 142 (148)
T 3hcz_A 82 FIRSKKIGGWLNVR-DSKN--H--TDFKITYDIY-ATPVLYVLDKNKVIIAKRIGYENLDDFLVQYE 142 (148)
T ss_dssp HHHHHTCTTSEEEE-CTTC--C--CCHHHHHCCC-SSCEEEEECTTCBEEEESCCGGGHHHHHHHHH
T ss_pred HHHHcCCCCceEEe-cccc--c--hhHHHhcCcC-CCCEEEEECCCCcEEEecCCHHHHHHHHHHHH
Confidence 22221111 22111 1000 0 0011112442 35789999999999999999999999888764
No 4
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=94.85 E-value=0.28 Score=38.94 Aligned_cols=129 Identities=15% Similarity=0.131 Sum_probs=74.3
Q ss_pred cCCceeehhhhcccceEEEEecC-HhHHHH-HHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc
Q 019918 181 DEKKIISVNNLRGIARLVICSGP-ASYIME-SFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL 258 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~-al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~ 258 (334)
.+++.+++.+++|..-+|...++ =..+.. ++...+.+.+++.+.+|.||-|.++... .+.+..+...++...-.-.
T Consensus 16 ~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~--~~~~~~~~~~~~~~~~~~~ 93 (158)
T 3eyt_A 16 NSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEH--HEAMTPISLKAFLHEYRIK 93 (158)
T ss_dssp SCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSC--GGGSCHHHHHHHHHHTTCC
T ss_pred cCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccc--cccCCHHHHHHHHHHcCCC
Confidence 56799999999986544443332 234555 4666677777887789999999885211 0111223333333332222
Q ss_pred eEEeecchhhHH-HHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 259 WQLTPVYVSEWS-KWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 259 w~A~Pv~~~eW~-~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
| |+..+.-. .-+.+-.+.-++. .-+.++++.+||+|+.+-.|..+..++.+.|
T Consensus 94 ~---~~~~d~~~~~~~~~~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 147 (158)
T 3eyt_A 94 F---PVGVDQPGDGAMPRTMAAYQMR-GTPSLLLIDKAGDLRAHHFGDVSELLLGAEI 147 (158)
T ss_dssp S---CEEEECCCSSSSCHHHHHTTCC-SSSEEEEECTTSEEEEEEESCCCHHHHHHHH
T ss_pred c---eEEEcCccchhhHHHHHHcCCC-CCCEEEEECCCCCEEEEEeCCCCHHHHHHHH
Confidence 2 22111100 0000011122442 3578999999999999999998887766554
No 5
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=94.70 E-value=0.82 Score=36.24 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=79.8
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+.--+++.+++.++++..-+|...++ =.++...+...+.+.+.+.+.+|.+|.|..+. ..+...+
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~--------~~~~~~~ 84 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE--------QLPNVKN 84 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC--------CHHHHHH
T ss_pred CCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC--------CHHHHHH
Confidence 34445555556899999999986555544433 35566667777788888888899999998852 1222333
Q ss_pred HhhhhccceEEeecchhhHHHHHHHHHHHc---CCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 251 FTRKRKRLWQLTPVYVSEWSKWLDEQKRTA---GISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 251 ~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~A---gv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
+...-.-.|...--. ++ .. ++.... ++ ..-+.++++..||+|..+-.|..+-.++.+.|
T Consensus 85 ~~~~~~~~~~~~~~~-~~---~~-~~~~~~~~~~i-~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 146 (165)
T 3or5_A 85 YMKTQGIIYPVMMAT-PE---LI-RAFNGYIDGGI-TGIPTSFVIDASGNVSGVIVGPRSKADFDRIV 146 (165)
T ss_dssp HHHHHTCCSCEEECC-HH---HH-HHHHTTSTTCS-CSSSEEEEECTTSBEEEEECSCCCHHHHHHHH
T ss_pred HHHHcCCCCceEecC-HH---HH-HHHhhhhccCC-CCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 333322333222111 11 11 111110 34 23588999999999999999988877776654
No 6
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=94.68 E-value=0.7 Score=38.60 Aligned_cols=131 Identities=18% Similarity=0.307 Sum_probs=71.5
Q ss_pred cCCceeehhhhcccceEEEEecC--HhHHHHHHhhchhhHHHHhhc--CcEEEEEeeCCCCCCCCccchHHHHHHhhh--
Q 019918 181 DEKKIISVNNLRGIARLVICSGP--ASYIMESFKRSEPFTESLLER--GVLVVSFTTDGNIPSFEFEESEEMKEFTRK-- 254 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~--~e~V~~al~~Ae~~r~~L~~r--gVLVVPV~~dg~sp~~~f~~~e~~~~~~~~-- 254 (334)
.+|+.++|++|||..-+|-.--+ +.-+-..+.....+.+.+.+. +|.+|-|.+|-..+ ..+..+++...
T Consensus 20 ~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~D-----tp~~l~~y~~~~~ 94 (170)
T 4hde_A 20 QDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLD-----KPENLKAFIQKFT 94 (170)
T ss_dssp TTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTC-----CHHHHHHHHTTTC
T ss_pred CCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccc-----cHHHHHHHHHHcC
Confidence 46899999999997544443222 223444455445555666554 48888777753211 12233444332
Q ss_pred -hccceEE-eecchhhHHHHHHHHHHHcCCCCC------CCeEEEEeeCCeeecc--cCCCCcHHHHHhcCC
Q 019918 255 -RKRLWQL-TPVYVSEWSKWLDEQKRTAGISPE------SPVYLSLRLDGRVRGS--GVGYPPWNAFVAQLP 316 (334)
Q Consensus 255 -~~~~w~A-~Pv~~~eW~~wi~eQ~e~Agv~~~------~gVyI~LrlDGRVr~S--G~G~PpW~~lv~eLP 316 (334)
....|.. +.-..++-..+....-....-.++ .+.++.|..||+|++. |....+-++++++|.
T Consensus 95 ~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik 166 (170)
T 4hde_A 95 EDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMK 166 (170)
T ss_dssp SCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHH
T ss_pred CCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHH
Confidence 2245654 333334444444332221111111 2356889999999976 555566688887753
No 7
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=94.56 E-value=1 Score=35.44 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=76.4
Q ss_pred cceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
.+.+.-.+++.+++.++++..-+|....+ =..+...+...+.+.+.+.+.+|.||.|..+.. .+...++..
T Consensus 8 ~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~--------~~~~~~~~~ 79 (151)
T 2f9s_A 8 NFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGES--------KIAVHNFMK 79 (151)
T ss_dssp CCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC--------HHHHHHHHH
T ss_pred cceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC--------HHHHHHHHH
Confidence 34444446899999999886554444433 245666666667777888888999999988531 122333333
Q ss_pred hhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 254 KRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 254 ~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
...-. .|+..+.-.. ..+.-++. .-+.++++..||+|+.+-.|..+...|.+.|
T Consensus 80 ~~~~~---~~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l 133 (151)
T 2f9s_A 80 SYGVN---FPVVLDTDRQ----VLDAYDVS-PLPTTFLINPEGKVVKVVTGTMTESMIHDYM 133 (151)
T ss_dssp HHTCC---SCEEEETTSH----HHHHTTCC-SSCEEEEECTTSEEEEEEESCCCHHHHHHHH
T ss_pred HcCCC---ceEEECCchH----HHHhcCCC-CCCeEEEECCCCcEEEEEeCCCCHHHHHHHH
Confidence 22222 2332221111 11223553 3578899999999999999988877665544
No 8
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=94.16 E-value=0.68 Score=38.61 Aligned_cols=146 Identities=15% Similarity=0.211 Sum_probs=84.5
Q ss_pred hhhhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchH
Q 019918 168 SREESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESE 246 (334)
Q Consensus 168 sREe~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e 246 (334)
.-.+.+-.+.+.--+++.+++.+++|..-+|..-++ =..+...+...+.+.+++.+.|+-||.|..|.-. ..+.+..+
T Consensus 24 ~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~-~~~~~~~~ 102 (185)
T 2gs3_A 24 RCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFG-KQEPGSNE 102 (185)
T ss_dssp GGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTT-TCCCSCHH
T ss_pred cCCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccC-CCCCCCHH
Confidence 344455566665567899999999996544433322 2355566666777788888899999999885310 01111223
Q ss_pred HHHHHhhhhccceEEee-cchh------hHHHHHHHHHHHcCCCCC----CCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 247 EMKEFTRKRKRLWQLTP-VYVS------EWSKWLDEQKRTAGISPE----SPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 247 ~~~~~~~~~~~~w~A~P-v~~~------eW~~wi~eQ~e~Agv~~~----~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
+..++...-.-.|...- ++.+ .|+ |+.++....|+.+. .+-.+.+.+||+|+.+-.|..++.+|.+.|
T Consensus 103 ~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~-~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 181 (185)
T 2gs3_A 103 EIKEFAAGYNVKFDMFSKICVNGDDAHPLWK-WMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 181 (185)
T ss_dssp HHHHHHHHTTCCSEEBCCCBSSSTTBCHHHH-HHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGH
T ss_pred HHHHHHHHcCCCCeeeeeeccCChhhhHHHH-HHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 34444433333343221 1111 232 33332211243221 357889999999999988887777776654
No 9
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=94.15 E-value=0.63 Score=36.90 Aligned_cols=123 Identities=11% Similarity=0.093 Sum_probs=75.6
Q ss_pred cCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccce
Q 019918 181 DEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLW 259 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~w 259 (334)
.+|+.++|.+++|..-+|...++ =..+...+..-+.+.+++.+.+|.||.|..|. .+...++...-.-.|
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~---------~~~~~~~~~~~~~~~ 82 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDT---------SDNIGNFLKQTPVSY 82 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSC---------HHHHHHHHHHSCCSS
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC---------hHHHHHHHHHcCCCC
Confidence 46899999999997555544443 23455556566666777777899999998842 223333333333333
Q ss_pred EEeecchhhHHHHHHHHHHHcC--CCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCCC
Q 019918 260 QLTPVYVSEWSKWLDEQKRTAG--ISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPP 317 (334)
Q Consensus 260 ~A~Pv~~~eW~~wi~eQ~e~Ag--v~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP~ 317 (334)
.........-... .+.-| + ..-+.++++..||+|+.+-.|..+.++|.+.|..
T Consensus 83 ~~~~~~~~~~~~~----~~~~~~~v-~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 83 PIWRYTGANSRNF----MKTYGNTV-GVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp CEEEECCSCHHHH----HHTTTCCS-CCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred ceEecCccchHHH----HHHhCCcc-CCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 2221111111111 11123 2 2357899999999999999999998888776543
No 10
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=93.99 E-value=0.83 Score=35.90 Aligned_cols=129 Identities=16% Similarity=0.245 Sum_probs=78.1
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+.-.+++.+++.++++..-+|...++ =......+...+.+.+.+.+.++.||-|..+.. ..+...+
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~-------~~~~~~~ 79 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEG-------GKVAVEE 79 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTT-------HHHHHHH
T ss_pred CCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCc-------chHHHHH
Confidence 34445555566899999999886555544433 345666666777788888888999999988632 1222333
Q ss_pred HhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHH--HHHhcC
Q 019918 251 FTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWN--AFVAQL 315 (334)
Q Consensus 251 ~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~--~lv~eL 315 (334)
+.....-.| |+..+.-.. + .+.-++. .-+.++++..||+|+.+-.|..+|+ ++.+.|
T Consensus 80 ~~~~~~~~~---~~~~d~~~~-~---~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l 138 (154)
T 3kcm_A 80 FFRKTGFTL---PVLLDADKR-V---GKLYGTT-GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFL 138 (154)
T ss_dssp HHHHHCCCC---CEEECTTCH-H---HHHHTCC-SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHH
T ss_pred HHHHcCCCe---eEEecCchH-H---HHHhCCC-CCCeEEEECCCCcEEEEEcCCCccccHHHHHHH
Confidence 333322222 222221111 1 1122442 3578999999999999988887766 444444
No 11
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=93.91 E-value=0.31 Score=37.77 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=81.9
Q ss_pred HhhhhhcccceEEecCCceeehh--hhcccceEEEEecC-HhHHHHHHhhchhhHHHH-hhcCcEEEEEeeCCCCCCCCc
Q 019918 167 LSREESLSNLKLRVDEKKIISVN--NLRGIARLVICSGP-ASYIMESFKRSEPFTESL-LERGVLVVSFTTDGNIPSFEF 242 (334)
Q Consensus 167 isREe~L~rL~Vrl~~~r~v~L~--qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L-~~rgVLVVPV~~dg~sp~~~f 242 (334)
+.-++.+-.+.+.-.+++.+++. ++++..-+|...++ =.+....+...+.+.+.+ .+.|+.||.|.++..
T Consensus 5 ~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~------ 78 (148)
T 3fkf_A 5 VTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDID------ 78 (148)
T ss_dssp CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSC------
T ss_pred ccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCC------
Confidence 44455566666666678999999 99886554444432 233555666666777788 788899999988641
Q ss_pred cchHHHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 243 EESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 243 ~~~e~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
.+...++.....-.|.... +...|..-+. +.-++. .-+.++.+..||+|..+..+...+.+.+.++
T Consensus 79 --~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~---~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l 144 (148)
T 3fkf_A 79 --REAWETAIKKDTLSWDQVC-DFTGLSSETA---KQYAIL-TLPTNILLSPTGKILARDIQGEALTGKLKEL 144 (148)
T ss_dssp --HHHHHHHHHHTTCCSEEEC-CSCGGGCHHH---HHTTCC-SSSEEEEECTTSBEEEESCCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHcCCCceEEE-ccCCcchHHH---HhcCCC-CcCEEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 2233333333333443321 2222222222 223553 3688999999999999988555555555543
No 12
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=93.91 E-value=1.2 Score=36.77 Aligned_cols=144 Identities=16% Similarity=0.237 Sum_probs=84.0
Q ss_pred hhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHH
Q 019918 171 ESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMK 249 (334)
Q Consensus 171 e~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~ 249 (334)
+.+-.+.+.--+++.+++.+++|..-+|...++ =..+...+...+.+.+++.+.++.||-|..|... ..+.+..++..
T Consensus 25 ~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~-~~e~~~~~~~~ 103 (183)
T 2obi_A 25 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFG-KQEPGSNEEIK 103 (183)
T ss_dssp CSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCST-TCCCSCHHHHH
T ss_pred CcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCC-CCCCCCHHHHH
Confidence 334455555456899999999997544443332 2355566666777888888899999999885311 01112223444
Q ss_pred HHhhhhccceEEee-cchh------hHHHHHHHHHHHcCCCCC----CCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 250 EFTRKRKRLWQLTP-VYVS------EWSKWLDEQKRTAGISPE----SPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 250 ~~~~~~~~~w~A~P-v~~~------eW~~wi~eQ~e~Agv~~~----~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
++...-.-.|...- ++.+ .|+ |+.++....|+.+. -+.+++|.+||+|+.+-.|..+..+|.+.|.
T Consensus 104 ~~~~~~~~~~p~~~~~d~~~~~~~~~~~-~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 104 EFAAGYNVKFDMFSKICVNGDDAHPLWK-WMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp HHHHTTTCCSEEBCCCCCSSTTSCHHHH-HHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred HHHHHcCCCceEEeeeccCCcchhHHHH-HhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 44433333333221 1111 132 33322110133221 2678999999999999999888888877664
No 13
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=93.81 E-value=0.38 Score=37.80 Aligned_cols=130 Identities=12% Similarity=0.113 Sum_probs=74.3
Q ss_pred hhcc-cceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 171 ESLS-NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 171 e~L~-rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
+.+- .+.+.--+++.+++.++++..-+|...++ =..+...+...+.+.+.+.+.++.||-|..+.. .+..
T Consensus 7 ~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~--------~~~~ 78 (152)
T 2lja_A 7 NPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN--------KKAW 78 (152)
T ss_dssp CCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC--------HHHH
T ss_pred CCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc--------HHHH
Confidence 3344 55555566899999999886655544432 122333333444556666677899999887531 1223
Q ss_pred HHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 249 KEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
.++.....-.|.....+.+. +-.+.-++. .-+.++++..||+|..+..|.++-.++.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~d~~~------~~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 138 (152)
T 2lja_A 79 ENMVTKDQLKGIQLHMGTDR------TFMDAYLIN-GIPRFILLDRDGKIISANMTRPSDPKTAEKF 138 (152)
T ss_dssp HHHHHHHTCCSEEEECSSCT------HHHHHTTCC-SSCCEEEECTTSCEEESSCCCTTCHHHHHHH
T ss_pred HHHHHhcCCCCceeecCcch------hHHHHcCcC-CCCEEEEECCCCeEEEccCCCCCHHHHHHHH
Confidence 33333333333222222110 111122442 3577999999999999999987766665544
No 14
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=93.63 E-value=2 Score=33.56 Aligned_cols=129 Identities=12% Similarity=0.162 Sum_probs=80.3
Q ss_pred cccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 173 L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
+-.+.+.--+++.+++.++++..-+|...++ =.++...+...+.+.+.+.+.++.||.|..+. +..+...++
T Consensus 8 ~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~-------~~~~~~~~~ 80 (153)
T 2l5o_A 8 APAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPI-------DPIESVRQY 80 (153)
T ss_dssp CCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTT-------SCHHHHHHH
T ss_pred CCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCC-------CCHHHHHHH
Confidence 3444454456899999999887655555443 34455556666667778888899999998742 222333444
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
...-.-.| |+..+.-.. + .+.-++. .-+.++++..||+|+..-.|.+++.++.+.|.
T Consensus 81 ~~~~~~~~---~~~~d~~~~-~---~~~~~i~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 137 (153)
T 2l5o_A 81 VKDYGLPF---TVMYDADKA-V---GQAFGTQ-VYPTSVLIGKKGEILKTYVGEPDFGKLYQEID 137 (153)
T ss_dssp HHHTTCCS---EEEECSSCH-H---HHHHTCC-SSSEEEEECSSSCCCEEEESSCCHHHHHHHHH
T ss_pred HHHcCCCc---eEEcCchHH-H---HHHcCCC-ccCeEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 33333333 332222111 1 1122452 35788999999999999899999988877654
No 15
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=93.49 E-value=0.43 Score=37.86 Aligned_cols=133 Identities=9% Similarity=0.092 Sum_probs=78.6
Q ss_pred hhhhcccceEEecCCceeehh--hhcccceEEEEecC-HhH--HHHHHhhchhhHHHH-hhcCcEEEEEeeCCCCCCCCc
Q 019918 169 REESLSNLKLRVDEKKIISVN--NLRGIARLVICSGP-ASY--IMESFKRSEPFTESL-LERGVLVVSFTTDGNIPSFEF 242 (334)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~--qLRg~aRvVIvAG~-~e~--V~~al~~Ae~~r~~L-~~rgVLVVPV~~dg~sp~~~f 242 (334)
-++.+-.+.+.-.+++.++|. ++++..-+|....+ =.. +...+...+.+.+++ .+.|+-||-|.+|.
T Consensus 7 ~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~------- 79 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDV------- 79 (150)
T ss_dssp TTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCS-------
T ss_pred CCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCC-------
Confidence 344555556655678999999 99986444433322 233 555666666777888 78899999998863
Q ss_pred cchHHHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhc
Q 019918 243 EESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQ 314 (334)
Q Consensus 243 ~~~e~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~e 314 (334)
..+...++.....-.|... .+...+..-+ .+.-++. .-+.++.+.+||+|+.+..+...+.+.+++
T Consensus 80 -~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~---~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l~~ 145 (150)
T 3fw2_A 80 -DKQQWKDAIKRDTLDWEQV-CDFGGLNSEV---AKQYSIY-KIPANILLSSDGKILAKNLRGEELKKKIEN 145 (150)
T ss_dssp -CHHHHHHHHHHTTCCSEEE-CCSCGGGCHH---HHHTTCC-SSSEEEEECTTSBEEEESCCHHHHHHHHHH
T ss_pred -CHHHHHHHHHHhCCCceEE-EcCcccchHH---HHHcCCC-ccCeEEEECCCCEEEEccCCHHHHHHHHHH
Confidence 1233344444433444332 1222222211 1223553 358899999999999998744444444443
No 16
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=93.36 E-value=1.2 Score=34.78 Aligned_cols=127 Identities=13% Similarity=0.096 Sum_probs=75.6
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchh---hHHHHhhcCcEEEEEeeCCCCCCCCccchHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEP---FTESLLERGVLVVSFTTDGNIPSFEFEESEE 247 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~---~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~ 247 (334)
.+-.+.+.-.+|+.++|.++++..-+|...++ =..+...+...+. +.+.+.+.++.||-|..|. ..+.
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~--------~~~~ 81 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDE--------ELDE 81 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSS--------CHHH
T ss_pred ccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCC--------CHHH
Confidence 34445565567899999999995444444332 2456666666666 7888888999999998853 1222
Q ss_pred HHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHH
Q 019918 248 MKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFV 312 (334)
Q Consensus 248 ~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv 312 (334)
..++...-...|.. ..+.+... +-.+.-++. .-+-++.+.+||+|..++.|...-.+++
T Consensus 82 ~~~~~~~~~~~~~~-~~d~~~~~----~~~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l 140 (142)
T 3eur_A 82 WKKHRNDFAKEWTN-GYDKELVI----KNKNLYDLR-AIPTLYLLDKNKTVLLKDATLQKVEQYL 140 (142)
T ss_dssp HHHHGGGSCTTSEE-EECTTCHH----HHTTCSCCT-TCSEEEEECTTCBEEEEEECHHHHHHHH
T ss_pred HHHHHHhccccccc-ccCccchh----hhhhhcCCC-cCCeEEEECCCCcEEecCCCHHHHHHHH
Confidence 33333333334433 22222210 011122442 3578999999999999998754444443
No 17
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=92.84 E-value=0.92 Score=36.74 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=72.3
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEec---CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSG---PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG---~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
.+-.+.+.-.+++.+++.+++|..-+||.-. .-..+...+..-+.+.+++.+.||-||-|..|. .+..
T Consensus 7 ~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~---------~~~~ 77 (161)
T 3drn_A 7 KAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD---------INSH 77 (161)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC---------HHHH
T ss_pred cCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC---------HHHH
Confidence 3344455556789999999999874444333 334566677777788888999999999987741 2233
Q ss_pred HHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCC---CCCeEEEEeeCCeeecccCC
Q 019918 249 KEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISP---ESPVYLSLRLDGRVRGSGVG 304 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~---~~gVyI~LrlDGRVr~SG~G 304 (334)
.++...-.-. .|+..+. ..=+ .+.-|+.. .-+.+++|..||+|+..-.|
T Consensus 78 ~~~~~~~~~~---~~~~~d~-~~~~---~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 78 KRFKEKYKLP---FILVSDP-DKKI---RELYGAKGFILPARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp HHHHHHTTCC---SEEEECT-TSHH---HHHTTCCCSSSCCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHhCCC---ceEEECC-cHHH---HHHcCCCCcCcccceEEEECCCCEEEEEEec
Confidence 3443333333 3333221 1111 12224432 15789999999999998888
No 18
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=92.82 E-value=2.4 Score=33.69 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=81.8
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+.--+|+.+++.+++|..-+|....+ =..+...+..-+.+.+++.+.|+-||-|..|.-.+ .+.+..+...+
T Consensus 10 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~-~~~~~~~~~~~ 88 (169)
T 2v1m_A 10 SIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGG-QEPWAEAEIKK 88 (169)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTT-CCCSCHHHHHH
T ss_pred ccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCC-CCCCCHHHHHH
Confidence 34445555556899999999996544443332 23566666667777888888999999998863111 11122233444
Q ss_pred H-hhhhccceEEee-cchh------hHHHHHHHHHHHcCCCC----CCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 251 F-TRKRKRLWQLTP-VYVS------EWSKWLDEQKRTAGISP----ESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 251 ~-~~~~~~~w~A~P-v~~~------eW~~wi~eQ~e~Agv~~----~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
+ ...-.-.|...- ++.+ .| .|+.++. .|+.+ .-+-++++.+||+|+.+-.|..++.++.+.|
T Consensus 89 ~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~l~~~~--~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 162 (169)
T 2v1m_A 89 FVTEKYGVQFDMFSKIKVNGSDADDLY-KFLKSRQ--HGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDI 162 (169)
T ss_dssp HHHHHHCCCSEEBCCCCCSSTTSCHHH-HHHHHHS--CCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHH
T ss_pred HHHHhcCCCCceEEEEeecCccccHHH-HHHHhhc--CCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHH
Confidence 4 233333343221 1211 22 3444321 23322 1257899999999999988887777766554
No 19
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=92.79 E-value=2.9 Score=33.02 Aligned_cols=127 Identities=9% Similarity=0.024 Sum_probs=78.1
Q ss_pred cCCceeehhhhcccceEEEEecC-Hh-HHHHHHhhchhhHHHHhh----cCcEEEEEeeCCCCCCCCccchHHHHHHhhh
Q 019918 181 DEKKIISVNNLRGIARLVICSGP-AS-YIMESFKRSEPFTESLLE----RGVLVVSFTTDGNIPSFEFEESEEMKEFTRK 254 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~-~e-~V~~al~~Ae~~r~~L~~----rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~ 254 (334)
.+|+.+++.+++|..-+|....+ =. .+...+...+.+.+++.+ .+|-||-|..|... +..+...++...
T Consensus 11 ~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~-----d~~~~~~~~~~~ 85 (164)
T 2ggt_A 11 HTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPER-----DTKEAIANYVKE 85 (164)
T ss_dssp TTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTT-----CCHHHHHHHHHT
T ss_pred CCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCC-----CCHHHHHHHHHH
Confidence 46899999999986544443332 22 366666677777778876 48999988886321 112344455544
Q ss_pred hccceEEeecchhhHHHHHHHHHHHcCCC--C-----CC-------CeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 255 RKRLWQLTPVYVSEWSKWLDEQKRTAGIS--P-----ES-------PVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 255 ~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~--~-----~~-------gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
-...|...+...+.-.+ -.+.-|+. | .. ..+++|..||+|+..-.|..+..+|.+.|.
T Consensus 86 ~~~~~~~l~~~~d~~~~----~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 157 (164)
T 2ggt_A 86 FSPKLVGLTGTREEVDQ----VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIA 157 (164)
T ss_dssp TCSSCEEEECCHHHHHH----HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHH
T ss_pred cCCCeEEEeCCHHHHHH----HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHH
Confidence 44566554433222111 11122442 1 01 168899999999999999888888877654
No 20
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=92.71 E-value=0.28 Score=39.74 Aligned_cols=126 Identities=9% Similarity=0.059 Sum_probs=71.6
Q ss_pred cccceEEecCCceeehhhhcccceEEEEecC--HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGP--ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 173 L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~--~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
+-.+.+.-.+++.+++.++++..-++....+ -..+...+..-+.+.+++ .++-||-|..|.......|
T Consensus 24 ~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d~~~~~~~~-------- 93 (167)
T 2jsy_A 24 APDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISADLPFAQARW-------- 93 (167)
T ss_dssp CCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECSSGGGTSCC--------
T ss_pred CCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECCCHHHHHHH--------
Confidence 3334444456899999999997544443333 456666666666666667 7899999888631111112
Q ss_pred Hhhhhcc-ceEEeecchhhHHHHHHHHHHHcCCCCC-----CCeEEEEeeCCeeecccCCCCc-----HHHHHhcC
Q 019918 251 FTRKRKR-LWQLTPVYVSEWSKWLDEQKRTAGISPE-----SPVYLSLRLDGRVRGSGVGYPP-----WNAFVAQL 315 (334)
Q Consensus 251 ~~~~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~-----~gVyI~LrlDGRVr~SG~G~Pp-----W~~lv~eL 315 (334)
...-.- .| |+..+....=+. +.-++... .+.+++|.+||+|+.+..|.++ ..++++.|
T Consensus 94 -~~~~~~~~~---~~~~d~~~~~~~---~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l 162 (167)
T 2jsy_A 94 -CGANGIDKV---ETLSDHRDMSFG---EAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAA 162 (167)
T ss_dssp -GGGSSCTTE---EEEEGGGTCHHH---HHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHH
T ss_pred -HHhcCCCCc---eEeeCCchhHHH---HHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHH
Confidence 111111 23 333331111111 22244322 2679999999999999987544 35665544
No 21
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=92.65 E-value=1.9 Score=35.60 Aligned_cols=137 Identities=12% Similarity=0.128 Sum_probs=79.9
Q ss_pred cceEEecCCceeehhhhcccceEEEE-ecCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVIC-SGPASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIv-AG~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
.+.+.--+|+.+++.+++|..-+|.. |--=..+...+...+.+.+++.+.|+.||-|..+.-.. .+.+..++..++..
T Consensus 20 ~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~-~~~d~~~~~~~~~~ 98 (180)
T 3kij_A 20 AFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGE-SEPRPSKEVESFAR 98 (180)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTT-CCCSCHHHHHHHHH
T ss_pred ceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCcccc-CCCCCHHHHHHHHH
Confidence 33444456899999999997444333 22233566667777778888999999999998753111 11222334444444
Q ss_pred h-hccceEEe----ecc--hhhHHHHHHHHHHHcCCCCC-CCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 254 K-RKRLWQLT----PVY--VSEWSKWLDEQKRTAGISPE-SPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 254 ~-~~~~w~A~----Pv~--~~eW~~wi~eQ~e~Agv~~~-~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
. -.-.|... ..+ ....-.|+.+.. +..|. .--.++|.+||+|+.+-.|..++.++.+++
T Consensus 99 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 165 (180)
T 3kij_A 99 KNYGVTFPIFHKIKILGSEGEPAFRFLVDSS---KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI 165 (180)
T ss_dssp HHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH---TCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHH
T ss_pred HhcCCCCceeeeeeccCccccHHHHHHHhcC---CCCccccceEEEECCCCCEEEEECCCCCHHHHHHHH
Confidence 3 23222211 111 112345554432 22121 112788999999999999988888776655
No 22
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=92.54 E-value=2.5 Score=31.57 Aligned_cols=129 Identities=15% Similarity=0.221 Sum_probs=70.9
Q ss_pred ceEEecCCceeehhhhcccceEEEEecCH-hHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICSGPA-SYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRK 254 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvAG~~-e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~ 254 (334)
+.+.-.+++.+++.++++..-+|...++- ......+...+.+.+. ...++.+|.|..+..+.. +..+...++...
T Consensus 5 f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~ 80 (138)
T 4evm_A 5 FELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGE---QSEADFKNWYKG 80 (138)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTC---CCHHHHHHHHTT
T ss_pred ceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCch---hhHHHHHHHHhh
Confidence 34444568999999999876554444332 3455555555555555 455788888865332211 112222333222
Q ss_pred hccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 255 RKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 255 ~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
. .+.-.|+..+.-.. -.+.-++. .-+.++.+..||+|..+-.|..+-.++.+.|
T Consensus 81 ~--~~~~~~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 134 (138)
T 4evm_A 81 L--DYKNLPVLVDPSGK----LLETYGVR-SYPTQAFIDKEGKLVKTHPGFMEKDAILQTL 134 (138)
T ss_dssp C--CCTTCCEEECTTCH----HHHHTTCC-SSSEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred c--CCCCeeEEECcchH----HHHHcCcc-cCCeEEEECCCCcEEEeecCCCcHHHHHHHH
Confidence 1 11122222221111 11122452 3588999999999999999988766666544
No 23
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=92.51 E-value=3.2 Score=32.76 Aligned_cols=129 Identities=14% Similarity=0.126 Sum_probs=77.3
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 252 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~ 252 (334)
-.+.+.-.+|+.+++.++++..-+|...++ =..+...+...+.+.+.+.+.++-||-|..+. ..+...++.
T Consensus 10 p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~--------~~~~~~~~~ 81 (152)
T 2lrn_A 10 PAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR--------REEDWKKAI 81 (152)
T ss_dssp CCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS--------CHHHHHHHH
T ss_pred CCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccC--------CHHHHHHHH
Confidence 334444456899999999987555444433 24566666666777788888899999998862 122333333
Q ss_pred hhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 253 RKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 253 ~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
......|.... +..+|.. +-.+.-|+. .-+.++.+..||+|+.+..+.....+.+++|
T Consensus 82 ~~~~~~~~~~~-d~~~~~~---~~~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l 139 (152)
T 2lrn_A 82 EEDKSYWNQVL-LQKDDVK---DVLESYCIV-GFPHIILVDPEGKIVAKELRGDDLYNTVEKF 139 (152)
T ss_dssp HHHTCCSEEEE-ECHHHHH---HHHHHTTCC-SSCEEEEECTTSEEEEECCCTTHHHHHHHHH
T ss_pred HHhCCCCeEEe-cccchhH---HHHHHhCCC-cCCeEEEECCCCeEEEeeCCHHHHHHHHHHH
Confidence 33334443222 1222222 222233553 3578899999999999986655555555443
No 24
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=92.51 E-value=0.18 Score=39.82 Aligned_cols=130 Identities=8% Similarity=-0.021 Sum_probs=72.0
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+ -.+++.++|.++++..-+|...++ =......+...+.+.+++.+.++.||-|.+|.+ .+...+
T Consensus 12 ~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~--------~~~~~~ 82 (143)
T 4fo5_A 12 LAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEK--------ESIFTE 82 (143)
T ss_dssp BCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSC--------HHHHHH
T ss_pred cCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCC--------HHHHHH
Confidence 3444445 245789999999996544444333 234556666666667777778999999988631 223333
Q ss_pred Hhhhhccce-EEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 251 FTRKRKRLW-QLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 251 ~~~~~~~~w-~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
+.....-.| ... .+...|.. +-.+.-++. .-+-++.+..||+|+.+..+.....+++++|
T Consensus 83 ~~~~~~~~~~~~~-~d~~~~~~---~~~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l~~i 143 (143)
T 4fo5_A 83 TVKIDKLDLSTQF-HEGLGKES---ELYKKYDLR-KGFKNFLINDEGVIIAANVTPEKLTEILKAI 143 (143)
T ss_dssp HHHHHTCCGGGEE-ECTTGGGS---HHHHHTTGG-GCCCEEEECTTSBEEEESCCHHHHHHHHTC-
T ss_pred HHHHhCCCCceee-ecccccch---HHHHHcCCC-CCCcEEEECCCCEEEEccCCHHHHHHHHHhC
Confidence 333333333 111 12222221 111222442 2467899999999999988765566665543
No 25
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=92.33 E-value=0.89 Score=35.31 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=68.6
Q ss_pred cceEEecCCceeehhhhcccceEEEEecC-HhHHHHH---HhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMES---FKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~a---l~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+.+.-.+++.+++.++++..-+|...++ =..+... |.....+.+.+.+.++.||-|..|. ..+...+
T Consensus 9 ~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~--------~~~~~~~ 80 (142)
T 3ewl_A 9 DFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDE--------NREEWAT 80 (142)
T ss_dssp CCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSS--------CHHHHHH
T ss_pred CCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecC--------CHHHHHH
Confidence 34444456899999999986444433332 2334444 3334447788888999999998752 1222233
Q ss_pred HhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhc
Q 019918 251 FTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQ 314 (334)
Q Consensus 251 ~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~e 314 (334)
+...-.-.|.... +.+.. + .+.+.-++. .-+-++.+..||+|+..+.+.....+++++
T Consensus 81 ~~~~~~~~~~~~~-d~~~~---~-~~~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~~l~~ 138 (142)
T 3ewl_A 81 KAVYMPQGWIVGW-NKAGD---I-RTRQLYDIR-ATPTIYLLDGRKRVILKDTSMEQLIDYLAT 138 (142)
T ss_dssp HHTTSCTTCEEEE-CTTCH---H-HHTTCSCCC-SSSEEEEECTTCBEEECSCCHHHHHHHHHC
T ss_pred HHHHcCCCcceee-CCccc---h-hhHHHcCCC-CCCeEEEECCCCCEEecCCCHHHHHHHHHH
Confidence 3333223332221 11111 0 001122442 357899999999999966544444444443
No 26
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=92.26 E-value=1.9 Score=36.55 Aligned_cols=132 Identities=11% Similarity=0.020 Sum_probs=77.1
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecCH-h-HHHHHHhhchhhHHHHhhc---CcEEEEEeeCCCCCCCCccchHHH
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGPA-S-YIMESFKRSEPFTESLLER---GVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~~-e-~V~~al~~Ae~~r~~L~~r---gVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
-.+.+.-.+|+.+++.+|+|..-+|..-++- . .+...+...+.+.+.|.+. +|-||-|..|... +..+..
T Consensus 22 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~-----d~~~~~ 96 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPAR-----DSPAVL 96 (200)
T ss_dssp CCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTT-----CCHHHH
T ss_pred CCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCC-----CCHHHH
Confidence 4445554568999999999975544444332 2 2555566666666667654 8888888876321 122344
Q ss_pred HHHhhhhccceEEeecchhhHHHHHHHHHHHcCCC---C------------CCCeEEEEeeCCeeecccCCCCcHHHHHh
Q 019918 249 KEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGIS---P------------ESPVYLSLRLDGRVRGSGVGYPPWNAFVA 313 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~---~------------~~gVyI~LrlDGRVr~SG~G~PpW~~lv~ 313 (334)
.++...-...|...+...++-.+..+ .-|+. + ..+..++|..||+|+..=.|..+...+.+
T Consensus 97 ~~~~~~~~~~~~~l~~~~d~~~~~~~----~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~ 172 (200)
T 2b7k_A 97 KEYLSDFHPSILGLTGTFDEVKNACK----KYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVD 172 (200)
T ss_dssp HHHHTTSCTTCEEEECCHHHHHHHHH----HTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHH
T ss_pred HHHHHHcCCCceEEeCCHHHHHHHHH----HcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHH
Confidence 45554444567776665433222222 12332 1 12367899999999998777655544444
Q ss_pred c
Q 019918 314 Q 314 (334)
Q Consensus 314 e 314 (334)
+
T Consensus 173 ~ 173 (200)
T 2b7k_A 173 K 173 (200)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=92.11 E-value=0.66 Score=37.91 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=68.3
Q ss_pred ceEEecCCceeehhhhcccceEEEEe-c-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICS-G-PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvA-G-~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
..+.-.+++.++|++|+|..-++..- + --..+...+..-+.+.++ .|+.||-|..|. .+...++..
T Consensus 29 f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d~---------~~~~~~~~~ 96 (166)
T 3p7x_A 29 FTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISADL---------PFAQKRWCA 96 (166)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESSC---------HHHHHHHHH
T ss_pred eEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECCC---------HHHHHHHHH
Confidence 33333468999999999964333322 2 234454444433333333 788888887641 223344443
Q ss_pred hhcc-ceEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCC-----CCcHHHHHhcCC
Q 019918 254 KRKR-LWQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVG-----YPPWNAFVAQLP 316 (334)
Q Consensus 254 ~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G-----~PpW~~lv~eLP 316 (334)
.-.- . .|+..|.|..=+.+ .-|+.. ..+..++|..||+|+.+..+ .|+++++++.|.
T Consensus 97 ~~~~~~---~~~l~D~~~~~~~~---~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 97 SAGLDN---VITLSDHRDLSFGE---NYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp HHTCSS---CEEEECTTTCHHHH---HHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred HcCCCc---eEEccCCchhHHHH---HhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 3222 3 35544555331222 224432 14678899999999998543 466777777653
No 28
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=91.97 E-value=0.52 Score=37.31 Aligned_cols=135 Identities=16% Similarity=0.137 Sum_probs=77.3
Q ss_pred cceEEe-cCCceeehhhhcccceEEEEec-CHhHHHH-HHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 175 NLKLRV-DEKKIISVNNLRGIARLVICSG-PASYIME-SFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 175 rL~Vrl-~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~-al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
.+.+.- -+++.+++.+++|..-+|.... .=..+.. .+...+.+.+.+.+.||.||-|.++... .+.+..+...++
T Consensus 11 ~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~--~~~~~~~~~~~~ 88 (160)
T 3lor_A 11 ELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEH--HDVMTPEALKVF 88 (160)
T ss_dssp CCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSC--GGGSCHHHHHHH
T ss_pred CcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccc--cccCCHHHHHHH
Confidence 344442 4579999999998654444333 3355555 5667777788888889999999885211 111122333333
Q ss_pred hhhhccceEEeecchhhHHH--HHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 252 TRKRKRLWQLTPVYVSEWSK--WLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~--wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
...-.-.| |+..+.-.. .+.+-.+.-|+. .-+-++.+..||+|+.+-.|..+..++.+.|
T Consensus 89 ~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 150 (160)
T 3lor_A 89 IDEFGIKF---PVAVDMPREGQRIPSTMKKYRLE-GTPSIILADRKGRIRQVQFGQVDDFVLGLLL 150 (160)
T ss_dssp HHHTTCCS---CEEEECCCTTCSSCHHHHHTTCC-SSSEEEEECTTSBEEEEEESCCCHHHHHHHH
T ss_pred HHHcCCCC---cEEECCccccchhhhHHHhcccC-ccceEEEECCCCcEEEEecCcCCHHHHHHHH
Confidence 33322222 221111100 001111222452 3578999999999999988888877766554
No 29
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=91.76 E-value=2.2 Score=32.73 Aligned_cols=122 Identities=11% Similarity=0.151 Sum_probs=72.0
Q ss_pred CCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccceE
Q 019918 182 EKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLWQ 260 (334)
Q Consensus 182 ~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~w~ 260 (334)
+++.+++.++++..-+|...++ =.+....+...+.+.+.+.+. +.+|.|.++...+.. ..+...++.....-.|
T Consensus 18 ~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~- 92 (148)
T 2b5x_A 18 NGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDL---DPGKIKETAAEHDITQ- 92 (148)
T ss_dssp SCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTS---SHHHHHHHHHHTTCCS-
T ss_pred cCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCcccc---CHHHHHHHHHHcCCCc-
Confidence 4788999999887655554443 344555555556666777666 888888876432221 1223333333322222
Q ss_pred EeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 261 LTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 261 A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
|+..+.-.. -.+.-++. .-+.++++..||+|..+..|..+..++.+.|
T Consensus 93 --~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 140 (148)
T 2b5x_A 93 --PIFVDSDHA----LTDAFENE-YVPAYYVFDKTGQLRHFQAGGSGMKMLEKRV 140 (148)
T ss_dssp --CEEECSSCH----HHHHTCCC-CSSEEEEECTTCBEEEEEESCSTTHHHHHHH
T ss_pred --ceEECCchh----HHHHhCCC-CCCEEEEECCCCcEEEEecCCCCHHHHHHHH
Confidence 322221111 11122552 3588999999999999999988877766544
No 30
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=91.36 E-value=0.68 Score=37.83 Aligned_cols=126 Identities=12% Similarity=0.175 Sum_probs=69.1
Q ss_pred cCCceeehhhhcccceEEEEe-cCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh-hhhccc
Q 019918 181 DEKKIISVNNLRGIARLVICS-GPASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT-RKRKRL 258 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvA-G~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~-~~~~~~ 258 (334)
.+|+.++|.+++|..-+|... -.-..+. .+...+.+.+++.+.||.||-|..+.... .+.+..++..++. ..-...
T Consensus 20 ~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~-~~~d~~~~~~~~~~~~~~~~ 97 (171)
T 3cmi_A 20 KKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGH-QEPGSDEEIAQFCQLNYGVT 97 (171)
T ss_dssp TTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC-------------------CCC
T ss_pred CCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCC-CCCCCHHHHHHHHHhccCCC
Confidence 358999999999965444332 2223455 55666677888888899999998852100 0001111122222 111112
Q ss_pred eEEeecch----------hhHHHHHHHHHHHcCCCCCCC------eEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 259 WQLTPVYV----------SEWSKWLDEQKRTAGISPESP------VYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 259 w~A~Pv~~----------~eW~~wi~eQ~e~Agv~~~~g------VyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
.|+.. ..|..|..+ .-++. .-+ .+++|.+||+|+.+-.|..++..+.+.|
T Consensus 98 ---~p~~~d~d~~~~~~~~~~~~~~~~---~~~v~-~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 163 (171)
T 3cmi_A 98 ---FPIMKKIDVNGGNEDPVYKFLKSQ---KSGML-GLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETI 163 (171)
T ss_dssp ---SCBBCCCBSSSTTBCHHHHHHHHH---SCCSS-SCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHH
T ss_pred ---ceEEeeccCCCccchHHHHHHHhc---cCCcC-CCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHH
Confidence 23221 235444332 12332 134 7899999999999999988777666554
No 31
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=91.09 E-value=4.8 Score=31.92 Aligned_cols=141 Identities=11% Similarity=0.133 Sum_probs=78.0
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 252 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~ 252 (334)
-.+.+.--+++.+++.+++|..-+|....+ =..+...+...+.+.+++.+.|+.||-|.+|... ..+.+..+...++.
T Consensus 13 p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~-~~~~~~~~~~~~~~ 91 (170)
T 2p5q_A 13 HDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFG-EEEPGTNDQITDFV 91 (170)
T ss_dssp GGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTT-TCCCSCHHHHHHHH
T ss_pred cceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCC-CCCCCCHHHHHHHH
Confidence 344444456899999999986544443332 2356666666777888888889999999886311 01112223333333
Q ss_pred h-hhccceEEee-cch-----hhHHHHHHHHHHHc--CCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 253 R-KRKRLWQLTP-VYV-----SEWSKWLDEQKRTA--GISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 253 ~-~~~~~w~A~P-v~~-----~eW~~wi~eQ~e~A--gv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
. .-...|...- .+. ...-+|+.++.... ..-|..+.++.|.+||+|+.+-.|..+..++.+.|
T Consensus 92 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 163 (170)
T 2p5q_A 92 CTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDI 163 (170)
T ss_dssp HHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHH
T ss_pred HHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHH
Confidence 3 2122221110 111 11223333322111 11132337899999999999988987776665544
No 32
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=90.70 E-value=0.42 Score=41.18 Aligned_cols=122 Identities=12% Similarity=0.120 Sum_probs=67.6
Q ss_pred ceEEecCCceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
+.+.-.+++.++|++|+|..-++..- ++ -..+...+...+.+.+++ .|+-||-|..|. .+...++..
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D~---------~~~~~~~~~ 129 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSDL---------PFAQSRFCG 129 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESSC---------HHHHTTCTT
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECCC---------HHHHHHHHH
Confidence 33333468999999999965333332 32 334444455444555555 688888887752 112222222
Q ss_pred hhcc-ceEEeecchhhHHHHHHHHH-HHcCCCC--------CCCeEEEEeeCCeeecccCCC-----CcHHHHHhcC
Q 019918 254 KRKR-LWQLTPVYVSEWSKWLDEQK-RTAGISP--------ESPVYLSLRLDGRVRGSGVGY-----PPWNAFVAQL 315 (334)
Q Consensus 254 ~~~~-~w~A~Pv~~~eW~~wi~eQ~-e~Agv~~--------~~gVyI~LrlDGRVr~SG~G~-----PpW~~lv~eL 315 (334)
.-.- .| |+..|.| +.+. +.-|+.. ..+-.++|..||+|+.+.+|. |+++++++.|
T Consensus 130 ~~~~~~f---~~l~D~~----~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~~L 199 (200)
T 3zrd_A 130 AEGLSNV---ITLSTLR----GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALAAL 199 (200)
T ss_dssp TTTCTTE---EEEETTS----CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred HcCCCCc---eEEecCc----hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHHhh
Confidence 2222 33 4444544 1121 2224431 136789999999999997665 4566666554
No 33
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=90.69 E-value=5.2 Score=31.88 Aligned_cols=135 Identities=13% Similarity=0.146 Sum_probs=75.6
Q ss_pred hhhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCC---------CCC
Q 019918 169 REESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDG---------NIP 238 (334)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg---------~sp 238 (334)
-.+.+-.+.+.--+++.+++.++++..-+|...++ =.++...+...+.+.+.+. +|.||-|..+. +.+
T Consensus 13 ~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~ 90 (165)
T 3ha9_A 13 VLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKP 90 (165)
T ss_dssp HHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCST
T ss_pred ccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccc
Confidence 44555666666677899999999986554444332 3446666666666666665 89999888862 111
Q ss_pred CCC-ccchHHHHHHhhhhcc-ceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCC-cHHHHHhcC
Q 019918 239 SFE-FEESEEMKEFTRKRKR-LWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYP-PWNAFVAQL 315 (334)
Q Consensus 239 ~~~-f~~~e~~~~~~~~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~P-pW~~lv~eL 315 (334)
..+ .+..+...++.....- .|. +..+ .. +..+.-++. .-+.++++.+||+|+. .|.. +.++|.+.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~d--~~---~~~~~~~v~-~~P~~~lid~~G~i~~--~g~~~~~~~l~~~l 159 (165)
T 3ha9_A 91 GYPPPDTPEMFRKFIANYGDPSWI---MVMD--DG---SLVEKFNVR-SIDYIVIMDKSSNVLY--AGTTPSLGELESVI 159 (165)
T ss_dssp TSCCCCCHHHHHHHHHHHSCTTSE---EEEC--CS---HHHHHTTCC-SSSEEEEEETTCCEEE--EEESCCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHcCCCCee---EEeC--hH---HHHHHhCCC-CceEEEEEcCCCcEEE--eCCCCCHHHHHHHH
Confidence 111 1112222333222211 221 1111 00 111122452 3588999999999999 6666 777766654
Q ss_pred C
Q 019918 316 P 316 (334)
Q Consensus 316 P 316 (334)
.
T Consensus 160 ~ 160 (165)
T 3ha9_A 160 K 160 (165)
T ss_dssp H
T ss_pred H
Confidence 3
No 34
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=90.61 E-value=4.2 Score=33.16 Aligned_cols=125 Identities=15% Similarity=0.161 Sum_probs=70.1
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 252 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~ 252 (334)
-.+.+.-.+++.+++.++++..-+|...++ =......+..-+.+.+.+.+.++-||-|..|..++ +...++.
T Consensus 41 p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~-------~~~~~~~ 113 (186)
T 1jfu_A 41 PDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDP-------EKPKTFL 113 (186)
T ss_dssp CCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCT-------THHHHHH
T ss_pred CCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCH-------HHHHHHH
Confidence 334444346899999999987655544433 23555566666677777777899999998864211 1122222
Q ss_pred hhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcH
Q 019918 253 RKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPW 308 (334)
Q Consensus 253 ~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW 308 (334)
..-. +.-.|+..+.= ..+.++.....-...-+.++++..||+|+.+-.|..+|
T Consensus 114 ~~~~--~~~~~~~~d~~-~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~ 166 (186)
T 1jfu_A 114 KEAN--LTRLGYFNDQK-AKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEW 166 (186)
T ss_dssp HHTT--CCTTCCEECTT-CHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCT
T ss_pred HHcC--CCCCceEECCc-chHHHHhccccccCCCCEEEEECCCCCEEEEEecCCcc
Confidence 2111 11122221111 11222221110001357899999999999998888876
No 35
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=90.46 E-value=4.5 Score=30.54 Aligned_cols=120 Identities=11% Similarity=0.062 Sum_probs=69.6
Q ss_pred eEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh
Q 019918 177 KLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR 255 (334)
Q Consensus 177 ~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~ 255 (334)
.+.--+++.+++.++++..-+|....+ =.+....+...+.+.+.+. ++.++-|..+. ..+...++....
T Consensus 8 ~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~--------~~~~~~~~~~~~ 77 (136)
T 1lu4_A 8 TATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRA--------DVGAMQSFVSKY 77 (136)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS--------CHHHHHHHHHHH
T ss_pred EeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCC--------CHHHHHHHHHHc
Confidence 343346899999999987655554433 3455555555555555554 89999888753 122223332222
Q ss_pred ccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccC---CCCcHHHHHhcC
Q 019918 256 KRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGV---GYPPWNAFVAQL 315 (334)
Q Consensus 256 ~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~---G~PpW~~lv~eL 315 (334)
.-.| |+..+.=.. ..+.-++. .-+.++.+..||+|. +-. |.++..++.+.|
T Consensus 78 ~~~~---~~~~d~~~~----~~~~~~i~-~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l 131 (136)
T 1lu4_A 78 NLNF---TNLNDADGV----IWARYNVP-WQPAFVFYRADGTST-FVNNPTAAMSQDELSGRV 131 (136)
T ss_dssp TCCS---EEEECTTSH----HHHHTTCC-SSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHH
T ss_pred CCCc---eEEECCchh----HHHhcCCC-CCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHH
Confidence 2222 221111111 11122442 358899999999999 888 988888877654
No 36
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=90.40 E-value=3.9 Score=33.77 Aligned_cols=142 Identities=17% Similarity=0.239 Sum_probs=79.3
Q ss_pred hhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 170 EESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 170 Ee~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
.+.+-.+.+.--+++.+++.+++|..-+|...++ =..+...+..-+.+.+++.+.++-||-|..|.... .+.+..++.
T Consensus 26 g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~-~e~~~~~~~ 104 (181)
T 2p31_A 26 EQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQ-QEPDSNKEI 104 (181)
T ss_dssp -CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTT-CCCSCHHHH
T ss_pred CCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCC-CCCCCHHHH
Confidence 3445555665556899999999996544443332 23566666677777888888899999998853110 011122233
Q ss_pred HHHhhh-hccceEEee-cchh------hHHHHHHHHHHHcCCCCCCC-eEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 249 KEFTRK-RKRLWQLTP-VYVS------EWSKWLDEQKRTAGISPESP-VYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 249 ~~~~~~-~~~~w~A~P-v~~~------eW~~wi~eQ~e~Agv~~~~g-VyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
.++... -...|.... ++.+ .| .|..+..- +. +.-. .+++|.+||+|+.+-.|..+..+|.+.+.
T Consensus 105 ~~~~~~~~~~~~p~~~~~d~~g~~~~~~~-~~~~~~~P--~~-~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 177 (181)
T 2p31_A 105 ESFARRTYSVSFPMFSKIAVTGTGAHPAF-KYLAQTSG--KE-PTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQIT 177 (181)
T ss_dssp HHHHHHHHCCCSCBBCCCCCSSTTSCHHH-HHHHHHHS--CC-CCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHH
T ss_pred HHHHHhhcCCCceeEeecccCCccchhhh-hhhhhcCC--Cc-cccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHH
Confidence 333332 222221110 0111 11 23322210 00 1111 58899999999999888888888776553
No 37
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=90.37 E-value=6.1 Score=32.20 Aligned_cols=133 Identities=9% Similarity=0.003 Sum_probs=79.1
Q ss_pred hhcccceEEec--CCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCc------EEEEEeeCCCCCCCC
Q 019918 171 ESLSNLKLRVD--EKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGV------LVVSFTTDGNIPSFE 241 (334)
Q Consensus 171 e~L~rL~Vrl~--~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgV------LVVPV~~dg~sp~~~ 241 (334)
+.+-.+.+.-- +++.++|.++++..-+|...++ =..+...+..-+.+.+.+.+.|+ .||-|..+..
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~----- 109 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY----- 109 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-----
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-----
Confidence 44555666655 7899999999996555544443 24566666677778888999988 9999988531
Q ss_pred ccchHHHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 242 FEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 242 f~~~e~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
..+...++...-.-.|...- +.+. .+..+...-++ ..-+.+++|.+||+|+.+-.|.++..+|.+.|
T Consensus 110 --~~~~~~~~~~~~~~~~~~~~-d~~~---~~~~~~~~~~v-~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 176 (183)
T 3lwa_A 110 --SRDIAQDFVTDNGLDYPSIY-DPPF---MTAASLGGVPA-SVIPTTIVLDKQHRPAAVFLREVTSKDVLDVA 176 (183)
T ss_dssp --CHHHHHHHHHHTTCCSCEEE-CTTC---GGGGGTTTCCT-TCCSEEEEECTTSCEEEEECSCCCHHHHHHHH
T ss_pred --CHHHHHHHHHHcCCCccEEE-CCcc---hHHHHhccCCC-CCCCeEEEECCCCcEEEEEcCCCCHHHHHHHH
Confidence 12223333332222222110 1000 00000000012 22577899999999999999998888877655
No 38
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=90.33 E-value=2.8 Score=34.99 Aligned_cols=143 Identities=15% Similarity=0.190 Sum_probs=81.0
Q ss_pred hhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 170 EESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 170 Ee~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
.+.+-.+.+.--+++.+++.+++|..-+|...++ =..+...+...+.+.+++.+.+|.||-|..|.... .+.+..++.
T Consensus 25 ~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~-~~~~~~~~~ 103 (190)
T 2vup_A 25 ASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGG-QEPGNEEEI 103 (190)
T ss_dssp CCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTT-CCCSCHHHH
T ss_pred CCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCC-CCCCCHHHH
Confidence 3334444444446899999999997655544332 23555666677778888888999999998863110 011122333
Q ss_pred HHHh-hhhccceEEee-cchh------hHHHHHHHHHHHcCCC--CC---CCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 249 KEFT-RKRKRLWQLTP-VYVS------EWSKWLDEQKRTAGIS--PE---SPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 249 ~~~~-~~~~~~w~A~P-v~~~------eW~~wi~eQ~e~Agv~--~~---~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
.++. ..-...|...- .+.+ -|+ |+.++ .-++. |. .+.+++|.+||+|+.+-.|..++.++.+.|
T Consensus 104 ~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~-~l~~~--~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 180 (190)
T 2vup_A 104 KEFVCTKFKAEFPIMAKINVNGENAHPLYE-YMKKT--KPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKL 180 (190)
T ss_dssp HHHHHHHHCCCSCBBCCCBSSSTTBCHHHH-HHHHH--SCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhcCCCeEEEeecccCcccccHHHH-HHHhh--cCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHH
Confidence 4443 22222221110 0101 232 33221 11221 10 127899999999999999988888877665
Q ss_pred C
Q 019918 316 P 316 (334)
Q Consensus 316 P 316 (334)
.
T Consensus 181 ~ 181 (190)
T 2vup_A 181 I 181 (190)
T ss_dssp H
T ss_pred H
Confidence 3
No 39
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=90.27 E-value=0.53 Score=37.65 Aligned_cols=121 Identities=10% Similarity=0.161 Sum_probs=71.3
Q ss_pred hhcccceEEecCCceeehhhhccc-ceEEEEe-c-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHH
Q 019918 171 ESLSNLKLRVDEKKIISVNNLRGI-ARLVICS-G-PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEE 247 (334)
Q Consensus 171 e~L~rL~Vrl~~~r~v~L~qLRg~-aRvVIvA-G-~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~ 247 (334)
+.+-.+.+.-.+|+.+++.+++|. .-+|... + --..+...+..-+.+.+++.+.++-||-|..|. .+.
T Consensus 13 ~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~---------~~~ 83 (160)
T 1xvw_A 13 ATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP---------PPT 83 (160)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC---------HHH
T ss_pred CCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC---------HHH
Confidence 334445554456899999999997 4444443 2 234566666666666777777899999888741 223
Q ss_pred HHHHhhhhccceEEeecchhhHH-HHHHHHHHHcCCCC---C--CCeEEEEeeCCeeecccCCCC
Q 019918 248 MKEFTRKRKRLWQLTPVYVSEWS-KWLDEQKRTAGISP---E--SPVYLSLRLDGRVRGSGVGYP 306 (334)
Q Consensus 248 ~~~~~~~~~~~w~A~Pv~~~eW~-~wi~eQ~e~Agv~~---~--~gVyI~LrlDGRVr~SG~G~P 306 (334)
..++...-.-. .|+..+.|. .=+. +.-|+.. + .+.++++..||+|+.+..|.+
T Consensus 84 ~~~~~~~~~~~---~~~~~d~~~~~~~~---~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~ 142 (160)
T 1xvw_A 84 HKIWATQSGFT---FPLLSDFWPHGAVS---QAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQP 142 (160)
T ss_dssp HHHHHHHHTCC---SCEEECTTTTTHHH---HHTTCEETTTTEECSEEEEECTTSBEEEEEECCT
T ss_pred HHHHHHhcCCC---ceEEecCCcChHHH---HHcCCccccCCCeeeeEEEECCCCeEEEEEecCC
Confidence 33333332222 355445431 1111 1224431 1 226889999999999998875
No 40
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=89.33 E-value=3.5 Score=32.84 Aligned_cols=129 Identities=16% Similarity=0.184 Sum_probs=79.2
Q ss_pred hhhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHH
Q 019918 169 REESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEE 247 (334)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~ 247 (334)
-.+.+-.+.+.--+++.+++.++++..-+|...++ =..+...+...+.+.+.+.+.++.+|.|..+.. ..++
T Consensus 17 ~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~--~~~~----- 89 (158)
T 3hdc_A 17 TGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKR--FPEK----- 89 (158)
T ss_dssp TTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSS--CCGG-----
T ss_pred CCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHH--HHHH-----
Confidence 34445555665567899999999987544444433 345666677777788888888999999988651 1111
Q ss_pred HHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHH--HHHhcCC
Q 019918 248 MKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWN--AFVAQLP 316 (334)
Q Consensus 248 ~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~--~lv~eLP 316 (334)
.......| |+..+.-. +-.+.-++. .-+-++++..||+|+.+-.|..+|+ ++++++-
T Consensus 90 ----~~~~~~~~---~~~~d~~~----~~~~~~~v~-~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 90 ----YRRAPVSF---NFLSDATG----QVQQRYGAN-RLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp ----GGGCCCSC---EEEECTTS----HHHHHTTCC-SSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred ----HHHcCCCc---eEEECchH----HHHHHhCCC-CcceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 11111222 22222111 111223553 3578999999999999999999885 3444443
No 41
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=89.26 E-value=4.9 Score=32.05 Aligned_cols=133 Identities=11% Similarity=0.023 Sum_probs=77.5
Q ss_pred ceEEecCCceeehhhhcccceEEEEecC-HhH-HHHHHhhchhhHHHHhh----cCcEEEEEeeCCCCCCCCccchHHHH
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICSGP-ASY-IMESFKRSEPFTESLLE----RGVLVVSFTTDGNIPSFEFEESEEMK 249 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~-V~~al~~Ae~~r~~L~~----rgVLVVPV~~dg~sp~~~f~~~e~~~ 249 (334)
..+.-.+++.+++.+|+|..-+|...++ =.. +...+..-+.+.+.+.+ .+|-||-|..|... +..+...
T Consensus 9 f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~-----d~~~~~~ 83 (171)
T 2rli_A 9 FHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPER-----DDVEAMA 83 (171)
T ss_dssp CEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTT-----CCHHHHH
T ss_pred eEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCC-----CCHHHHH
Confidence 3343356899999999986544333332 222 66666666667777765 58999998886321 1123344
Q ss_pred HHhhhhccceEEeecchhhHHHHHHHHHHHcCCC--CC------------CCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 250 EFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGIS--PE------------SPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 250 ~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~--~~------------~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
++...-...|....-..++ +.+-.+.-|+. |. .+.+++|.+||+|+.+-.|..+..++.+.|
T Consensus 84 ~~~~~~~~~~~~l~~~~~~----~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l 159 (171)
T 2rli_A 84 RYVQDFHPRLLGLTGSTKQ----VAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSV 159 (171)
T ss_dssp HHHHTTCTTCCEEECCHHH----HHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHH
T ss_pred HHHHHcCCCeEEEeCCHHH----HHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHH
Confidence 4444444455433222111 11111222442 10 126899999999999988988888887765
Q ss_pred CC
Q 019918 316 PP 317 (334)
Q Consensus 316 P~ 317 (334)
..
T Consensus 160 ~~ 161 (171)
T 2rli_A 160 RR 161 (171)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 42
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=89.07 E-value=5.8 Score=32.64 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=80.1
Q ss_pred cceEEecCCceeehhhhcccceEEEEecCHh--HHHHHHhhchhhHHHHhh--cCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVICSGPAS--YIMESFKRSEPFTESLLE--RGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~~e--~V~~al~~Ae~~r~~L~~--rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+.+.-.+|+.+++.+|+|..-+|..-.+.= .+...+..-+.+.+++.+ .++-||-|.+|. . +..+..++
T Consensus 10 ~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~-~-----d~~~~~~~ 83 (170)
T 3me7_A 10 DITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP-K-----DTLEDIKR 83 (170)
T ss_dssp TCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT-T-----CCHHHHHH
T ss_pred CeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC-C-----CCHHHHHH
Confidence 4455446789999999998765555555432 466666666677777765 568888888863 1 12233344
Q ss_pred Hhhhhc---cceEE-eecchhhHHHHHHHHHHHcCCC--------CCCCeEEEEeeCCeeecccCCC-CcHHHHHhcCCC
Q 019918 251 FTRKRK---RLWQL-TPVYVSEWSKWLDEQKRTAGIS--------PESPVYLSLRLDGRVRGSGVGY-PPWNAFVAQLPP 317 (334)
Q Consensus 251 ~~~~~~---~~w~A-~Pv~~~eW~~wi~eQ~e~Agv~--------~~~gVyI~LrlDGRVr~SG~G~-PpW~~lv~eLP~ 317 (334)
+...-. ..|.. .+-+.++-.+..+. -|+. ...+.+++|..||+|+..=.|. |+..++.+.|..
T Consensus 84 ~~~~~~~~~~~w~~l~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~ 159 (170)
T 3me7_A 84 FQKEYGIDGKGWKVVKAKTSEDLFKLLDA----IDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRL 159 (170)
T ss_dssp HHHHTTCCSSSEEEEEESSHHHHHHHHHH----TTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHH
T ss_pred HHHHcCCCCCCeEEEeCCCHHHHHHHHHH----CCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 433322 34643 33344444443322 1221 1245688999999999865664 667877776543
No 43
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=89.03 E-value=0.48 Score=41.30 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=75.6
Q ss_pred HHHHhhhhhcccceEEe--c-CCceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCC
Q 019918 164 LARLSREESLSNLKLRV--D-EKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIP 238 (334)
Q Consensus 164 larisREe~L~rL~Vrl--~-~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp 238 (334)
...+.-.+.+-.+.+.- + +++.++|.+++|..-+|..- ++ -..+...+...+.+.+++.+.||-||-|..|.
T Consensus 37 ~~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~--- 113 (222)
T 3ztl_A 37 TMVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDS--- 113 (222)
T ss_dssp ---CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC---
T ss_pred cccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC---
Confidence 34556666666666652 2 35999999999864333222 22 45667777777788888999999999988742
Q ss_pred CCCccchHHHHHHhhhhccc----eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCCcHH
Q 019918 239 SFEFEESEEMKEFTRKRKRL----WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYPPWN 309 (334)
Q Consensus 239 ~~~f~~~e~~~~~~~~~~~~----w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~PpW~ 309 (334)
.++..++...-++. ..-+|+..|.= .+-.+.-++.. .-+-+++|..||+|+..-.|..++.
T Consensus 114 ------~~~~~~~~~~~~~~~~~~~~~~~~l~D~~----~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~ 183 (222)
T 3ztl_A 114 ------QYSHLAWDNLDRKSGGLGHMKIPLLADRK----QEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVG 183 (222)
T ss_dssp ------HHHHHHHHHSCGGGTSCCSCSSCEEECSS----SHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBC
T ss_pred ------HHHHHHHHHHhhhhccccccceeEEeCCc----hHHHHHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 11222222211000 12223322210 01112224431 2467899999999999988775543
No 44
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=88.99 E-value=3 Score=33.82 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=67.1
Q ss_pred ceEEecCCceeehhhhcccceEEEE-ecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVIC-SGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIv-AG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
..+.-.+++.+++.+++|..-++.. +++ -..+...+..-+.+.+++ .++-||-|..|. .+...++..
T Consensus 25 f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d~---------~~~~~~~~~ 93 (163)
T 1psq_A 25 FSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMDL---------PFAQKRWCG 93 (163)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSC---------HHHHHHHHH
T ss_pred EEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECCC---------HHHHHHHHH
Confidence 3343346899999999997432222 222 234555555544455555 688888887741 223334443
Q ss_pred hhcc-ceEEeecchhhHHHHHHHHHHHcCCCCC-----CCeEEEEeeCCeeecccCCCCcH-----HHHHhcC
Q 019918 254 KRKR-LWQLTPVYVSEWSKWLDEQKRTAGISPE-----SPVYLSLRLDGRVRGSGVGYPPW-----NAFVAQL 315 (334)
Q Consensus 254 ~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~-----~gVyI~LrlDGRVr~SG~G~PpW-----~~lv~eL 315 (334)
.-.- .| |+..|.+..=+.+ .-|+... .+..++|..||+|+....|..+| +++++.|
T Consensus 94 ~~~~~~~---~~l~D~~~~~~~~---~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l 160 (163)
T 1psq_A 94 AEGLDNA---IMLSDYFDHSFGR---DYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAA 160 (163)
T ss_dssp HHTCTTS---EEEECTTTCHHHH---HHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHH
T ss_pred hcCCCCc---EEecCCchhHHHH---HhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHH
Confidence 3333 34 3332311111111 1244321 36889999999999999875444 4555543
No 45
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=88.14 E-value=2.7 Score=33.02 Aligned_cols=130 Identities=14% Similarity=0.181 Sum_probs=77.9
Q ss_pred hhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 170 EESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 170 Ee~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
++.+-.+.+.-.+++.+++.+++ ..-+|...++ =......+...+.+.+.+ ++-||-|..+. .+..+..
T Consensus 8 g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~------~~~~~~~ 77 (154)
T 3ia1_A 8 GEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREP------RDTREVV 77 (154)
T ss_dssp BEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCT------TCCHHHH
T ss_pred CCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCC------cccHHHH
Confidence 34455555655678999999998 4444444433 345666666666666666 78888887751 1122333
Q ss_pred HHHhhhhccceEEeecchh--hHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 249 KEFTRKRKRLWQLTPVYVS--EWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~--eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
.++...-.. -+|+..+ +...-+ .+.-++. .-+.++.+.+||+|+..-.|..+.+++.+.|.
T Consensus 78 ~~~~~~~~~---~~~~~~d~~~~~~~~---~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 140 (154)
T 3ia1_A 78 LEYMKTYPR---FIPLLASDRDRPHEV---AARFKVL-GQPWTFVVDREGKVVALFAGRAGREALLDALL 140 (154)
T ss_dssp HHHHTTCTT---EEECBCCSSCCHHHH---HTTSSBC-SSCEEEEECTTSEEEEEEESBCCHHHHHHHHH
T ss_pred HHHHHHcCC---CcccccccccchHHH---HHHhCCC-cccEEEEECCCCCEEEEEcCCCCHHHHHHHHH
Confidence 344333333 3344433 111111 1122442 35789999999999999999988888776654
No 46
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=88.11 E-value=1.6 Score=36.51 Aligned_cols=141 Identities=13% Similarity=0.158 Sum_probs=77.0
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 252 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~ 252 (334)
-.+.+.--+|+.++|.+++|..-+|..-++ =..+...+...+.+.+++.+.|+.||-|.+|.-.. .+.+..++..++.
T Consensus 27 p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~-~e~~~~~~~~~~~ 105 (187)
T 3dwv_A 27 FDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGG-QEPGNEEEIKEFV 105 (187)
T ss_dssp GGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSS-CSSSBTTHHHHSC
T ss_pred CCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCC-CCCCCHHHHHHHH
Confidence 333343346899999999996544443222 12244555566667788888899999998863110 1111122233322
Q ss_pred hhh-ccceEEee-cch-----hhHHHHHHHHHH-HcCCCCCCC---eEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 253 RKR-KRLWQLTP-VYV-----SEWSKWLDEQKR-TAGISPESP---VYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 253 ~~~-~~~w~A~P-v~~-----~eW~~wi~eQ~e-~Agv~~~~g---VyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
... .-.|...- ++. ..--.|+.++.. .-++ +.-+ -+++|.+||+|+.+-.|..+..++.+.|.
T Consensus 106 ~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~-~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~ 179 (187)
T 3dwv_A 106 CTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILAT-KAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLI 179 (187)
T ss_dssp CBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSS-SSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHH
T ss_pred HhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCC-CccccceeEEEECCCCCEEEEECCCCCHHHHHHHHH
Confidence 211 12221110 010 111234444321 1122 2234 78999999999999999988888776653
No 47
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=88.09 E-value=6.1 Score=31.46 Aligned_cols=114 Identities=11% Similarity=0.065 Sum_probs=68.2
Q ss_pred EEecCCceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh
Q 019918 178 LRVDEKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR 255 (334)
Q Consensus 178 Vrl~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~ 255 (334)
+.-.+|+.+++.+++|..-++..- ++ -..+...+...+.+.+++.+.|+-||-|..| ..+...++...-
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d---------~~~~~~~~~~~~ 90 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD---------SVKSHDNFCAKQ 90 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS---------CHHHHHHHHHHH
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC---------CHHHHHHHHHHh
Confidence 444568999999999984333332 22 4567777888888889999999999999885 122233333332
Q ss_pred ccceEEeecchhhHHHHHHHHHHHcCCCCC-----------CCeEEEEeeCCeeecccCCCCc
Q 019918 256 KRLWQLTPVYVSEWSKWLDEQKRTAGISPE-----------SPVYLSLRLDGRVRGSGVGYPP 307 (334)
Q Consensus 256 ~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~-----------~gVyI~LrlDGRVr~SG~G~Pp 307 (334)
.-.| |+..+ ...-+. +.-|+... .+.+++|..||+|+..-.|..+
T Consensus 91 ~~~~---~~~~d-~~~~~~---~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~ 146 (163)
T 3gkn_A 91 GFAF---PLVSD-GDEALC---RAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV 146 (163)
T ss_dssp CCSS---CEEEC-TTCHHH---HHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEECSCCS
T ss_pred CCCc---eEEEC-CcHHHH---HHhCCccccccccccccCcceEEEEECCCCeEEEEEcCCCc
Confidence 2222 22211 111111 11233210 4678899999999977655543
No 48
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=87.74 E-value=7.2 Score=32.09 Aligned_cols=132 Identities=17% Similarity=0.200 Sum_probs=73.2
Q ss_pred HhhhhhcccceEEecCC--ceeehhhhcccceEEEEecCH-hHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCcc
Q 019918 167 LSREESLSNLKLRVDEK--KIISVNNLRGIARLVICSGPA-SYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFE 243 (334)
Q Consensus 167 isREe~L~rL~Vrl~~~--r~v~L~qLRg~aRvVIvAG~~-e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~ 243 (334)
+.-++.+-.+.+.--++ +.+++.++++..-+|...++- ..+... .+.-++|.+.+|-||-|.++.
T Consensus 30 ~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~----~~~l~~l~~~~v~vv~vs~~d-------- 97 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVE----HPELTRLAEQGVVIYGINYKD-------- 97 (176)
T ss_dssp TTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHH----HHHHHHHHHTTCEEEEEEESC--------
T ss_pred cccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHH----HHHHHHHHHCCCEEEEEeCCC--------
Confidence 33444455555554445 889999999976555554432 223333 233334455599999998742
Q ss_pred chHHHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCCC
Q 019918 244 ESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPP 317 (334)
Q Consensus 244 ~~e~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP~ 317 (334)
..+...++...-.-.|...-.+.+ .-+. +.-++. .-+.++++..||+|+.+-.|..+...+.+.|..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~d~~---~~~~---~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 98 DNAAAIKWLNELHNPYLLSISDAD---GTLG---LDLGVY-GAPETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp CHHHHHHHHHHTTCCCSEEEEETT---CHHH---HHHTCC-SSCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred CHHHHHHHHHHcCCCCceEEECCc---chHH---HHcCCC-CCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 122333333332222211001110 0111 112442 257899999999999999999888887776543
No 49
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=87.22 E-value=5 Score=30.56 Aligned_cols=133 Identities=12% Similarity=0.149 Sum_probs=78.9
Q ss_pred hhhhcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHH
Q 019918 169 REESLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEE 247 (334)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~ 247 (334)
..+.+-.+.+.-.+++.+++.+ ++..-+|...++ =.+....+...+.+.+.+.+.++-||.|..+... +..+.
T Consensus 11 ~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~-----~~~~~ 84 (145)
T 3erw_A 11 QPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSE-----QNQQV 84 (145)
T ss_dssp -CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGS-----SCHHH
T ss_pred CCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCc-----CCHHH
Confidence 3444555555556789999999 776555544433 3456666666677777777778999999885421 11222
Q ss_pred HHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 248 MKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 248 ~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
..++.....-. .|+..+.-... .+.-++. .-+.++.+..||+|..+-.|..+..++.+.|
T Consensus 85 ~~~~~~~~~~~---~~~~~d~~~~~----~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 85 VEDFIKANKLT---FPIVLDSKGEL----MKEYHII-TIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHHHHHTTCC---SCEEECSSSHH----HHHTTCC-EESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHcCCc---eeEEEcCchhH----HHhcCcC-ccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 33333322222 22222211111 1122442 3578999999999999999998888776543
No 50
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=86.67 E-value=6.4 Score=34.63 Aligned_cols=138 Identities=12% Similarity=0.066 Sum_probs=74.8
Q ss_pred cccceEEecC-CceeehhhhcccceEEEE-ecCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 173 LSNLKLRVDE-KKIISVNNLRGIARLVIC-SGPASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 173 L~rL~Vrl~~-~r~v~L~qLRg~aRvVIv-AG~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
+-.+.+.-.+ |+.++|++|||..-+|.. |-.=..+. -+..-+.+.+++.+.|+.||-|..+.-. ..+.+..++..+
T Consensus 35 ~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~-~~e~~~~~~i~~ 112 (215)
T 2i3y_A 35 IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFG-KQEPGDNKEILP 112 (215)
T ss_dssp GGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCST-TCCCSCHHHHHH
T ss_pred cCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccC-cCCCCCHHHHHH
Confidence 3444555456 899999999997433332 21111222 3444566777888889999998874210 112222334455
Q ss_pred Hhh------hhccceEEeecch----------hhHHHHHHHHHHH-cCCC---------C-------CCCeEEEEeeCCe
Q 019918 251 FTR------KRKRLWQLTPVYV----------SEWSKWLDEQKRT-AGIS---------P-------ESPVYLSLRLDGR 297 (334)
Q Consensus 251 ~~~------~~~~~w~A~Pv~~----------~eW~~wi~eQ~e~-Agv~---------~-------~~gVyI~LrlDGR 297 (334)
+.. +-.-. .|+.. ..|. |+.++... .++. | -..-.+.|.+||+
T Consensus 113 f~~~~~~~~~~~~~---fpll~d~d~~g~~~~~~~~-~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~ 188 (215)
T 2i3y_A 113 GLKYVRPGGGFVPS---FQLFEKGDVNGEKEQKVFS-FLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGI 188 (215)
T ss_dssp HHHHTSSCTTCCCS---SEEBCCCCSSSTTCCHHHH-HHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHhccchhccCcc---ceeEeeeccCCcccchHHH-HHHhhCcccccccccccccccccccccccccCceEEEECCCCe
Confidence 544 21222 33321 1244 33333210 0110 0 0135788999999
Q ss_pred eecccCCCCcHHHHHhcCC
Q 019918 298 VRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 298 Vr~SG~G~PpW~~lv~eLP 316 (334)
|+.+-.|.-++.+|.+++.
T Consensus 189 vv~~~~g~~~~~~l~~~I~ 207 (215)
T 2i3y_A 189 PVMRWSHRATVSSVKTDIL 207 (215)
T ss_dssp EEEEECTTSCHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHH
Confidence 9999888777777766553
No 51
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=86.51 E-value=5.5 Score=34.65 Aligned_cols=135 Identities=12% Similarity=0.055 Sum_probs=74.2
Q ss_pred cccceEEecC-CceeehhhhcccceEEEE----ecCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHH
Q 019918 173 LSNLKLRVDE-KKIISVNNLRGIARLVIC----SGPASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEE 247 (334)
Q Consensus 173 L~rL~Vrl~~-~r~v~L~qLRg~aRvVIv----AG~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~ 247 (334)
+-.+.+.--+ |+.++|++|||..-+|.. +|+- .-+..-+.+.+++.+.|+.||-|..+.-. ..+.+..++
T Consensus 17 ~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c----~e~p~L~~l~~~~~~~g~~vlgvs~d~f~-~~e~~~~~~ 91 (207)
T 2r37_A 17 IYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT----GQYIELNALQEELAPFGLVILGFPCNQFG-KQEPGENSE 91 (207)
T ss_dssp GGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT----THHHHHHHHHHHHGGGTEEEEEEECCCBT-TCCCSCHHH
T ss_pred cCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh----HHHHHHHHHHHHhccCCEEEEEEECcccC-cCCCCCHHH
Confidence 3444454456 899999999997433322 3332 22444566777888889999999864210 012222334
Q ss_pred HHHHhh------hhccceEEeecch----------hhHHHHHHHHHH-HcCCC---------C-------CCCeEEEEee
Q 019918 248 MKEFTR------KRKRLWQLTPVYV----------SEWSKWLDEQKR-TAGIS---------P-------ESPVYLSLRL 294 (334)
Q Consensus 248 ~~~~~~------~~~~~w~A~Pv~~----------~eW~~wi~eQ~e-~Agv~---------~-------~~gVyI~Lrl 294 (334)
..++.. +-.-. .|+.. ..|.- +.+... ..++. | -.+-.+.|.+
T Consensus 92 i~~f~~~~~~~~~~~~~---fp~l~d~d~~g~~~~~~~~~-l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~ 167 (207)
T 2r37_A 92 ILPTLKYVRPGGGFVPN---FQLFEKGDVNGEKEQKFYTF-LKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGP 167 (207)
T ss_dssp HHHHHHHTSSCTTCCCS---SEEBCCCCSSSTTCCHHHHH-HHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECT
T ss_pred HHHHHHhcchhhccCcc---ceeeeEeccCCcccchHHHH-HHhhCccccccccccccccccccccCcccccceEEEECC
Confidence 455544 22222 23321 12433 333221 00110 0 0135788999
Q ss_pred CCeeecccCCCCcHHHHHhcCC
Q 019918 295 DGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 295 DGRVr~SG~G~PpW~~lv~eLP 316 (334)
||+|+.+-.|.-++.++.+++.
T Consensus 168 ~G~i~~~~~g~~~~~~l~~~I~ 189 (207)
T 2r37_A 168 DGIPIMRWHHRTTVSNVKMDIL 189 (207)
T ss_dssp TSCEEEEECTTSCHHHHHHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHH
Confidence 9999999888777777766553
No 52
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=86.43 E-value=4.8 Score=31.74 Aligned_cols=128 Identities=13% Similarity=0.116 Sum_probs=75.4
Q ss_pred cCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccce
Q 019918 181 DEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLW 259 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~w 259 (334)
-+++.+++.++++..-+|....+ =.++...+..-+.+.+++...+|-||.|.++....... .+...++... ..|
T Consensus 26 ~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~---~~~~~~~~~~--~~~ 100 (164)
T 2h30_A 26 ADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKK---DGEFQKWYAG--LNY 100 (164)
T ss_dssp TTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCC---TTHHHHHHTT--SCC
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccC---HHHHHHHHHh--CCC
Confidence 45788999999987655555443 23455555555566666777899999998864221111 1122222211 122
Q ss_pred EEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCCCc
Q 019918 260 QLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLPPV 318 (334)
Q Consensus 260 ~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP~~ 318 (334)
...|+..++-.... +.-++. .-+.++.+..||+|+.+-.|..++.+|.+.|..+
T Consensus 101 ~~~~~~~d~~~~~~----~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 101 PKLPVVTDNGGTIA----QNLNIS-VYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp TTSCEEECTTCHHH----HHTTCC-SSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred CcceEEEcCchHHH----HHcCCC-ccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 22344433322211 122442 3578999999999999988988888877665543
No 53
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=86.16 E-value=2.8 Score=33.68 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=64.6
Q ss_pred ceEEecCCceeehhhhcccceEEEEe---c-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICS---G-PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvA---G-~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
..+.-.+++.++|.+|++..++||+. + .-..+...+..-+.+.+++.+.+ -||-|..| ..+...++
T Consensus 16 f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d---------~~~~~~~~ 85 (159)
T 2a4v_A 16 LSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD---------SVTSQKKF 85 (159)
T ss_dssp CEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC---------CHHHHHHH
T ss_pred eEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC---------CHHHHHHH
Confidence 33433468999999999974433322 2 23466667777777788888888 77777664 12233344
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHcCCCCC-----CCeEEEEeeCCeeecccCCCCc
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPE-----SPVYLSLRLDGRVRGSGVGYPP 307 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~-----~gVyI~LrlDGRVr~SG~G~Pp 307 (334)
...-.-.| |+..|.=.+ +.+ .-|+... .+..++| .||+|+..-.|..|
T Consensus 86 ~~~~~~~~---~~l~D~~~~-~~~---~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~ 138 (159)
T 2a4v_A 86 QSKQNLPY---HLLSDPKRE-FIG---LLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISP 138 (159)
T ss_dssp HHHHTCSS---EEEECTTCH-HHH---HHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCH
T ss_pred HHHhCCCc---eEEECCccH-HHH---HhCCcccccCCccceEEEE-cCCEEEEEEccCCc
Confidence 43333333 433221001 111 1133221 1234556 99999999999765
No 54
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=86.12 E-value=2.2 Score=34.83 Aligned_cols=122 Identities=12% Similarity=0.106 Sum_probs=68.0
Q ss_pred ceEEecCCceeehhhhcccceEEEEe-c-CHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICS-G-PASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvA-G-~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
..+.-.+++.+++.+++|..-++... + .-..+...+..-+.+.+++ .+|-||-|..|. .+...++..
T Consensus 30 f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d~---------~~~~~~~~~ 98 (171)
T 2yzh_A 30 AVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMDL---------PFAQKRFCE 98 (171)
T ss_dssp EEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESSC---------HHHHHHHHH
T ss_pred eEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCCC---------HHHHHHHHH
Confidence 33333468999999999874343332 2 2334555555555555555 688888887742 223334443
Q ss_pred hhcc-ceEEeecchhhHHHHHHHHHHHcCCCC--------CCCeEEEEeeCCeeecccCC-----CCcHHHHHhcC
Q 019918 254 KRKR-LWQLTPVYVSEWSKWLDEQKRTAGISP--------ESPVYLSLRLDGRVRGSGVG-----YPPWNAFVAQL 315 (334)
Q Consensus 254 ~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~--------~~gVyI~LrlDGRVr~SG~G-----~PpW~~lv~eL 315 (334)
.-.- .| |+..|.... +.+.-|+.. ..+-.++|..||+|+....| .|+.+++++.|
T Consensus 99 ~~~~~~~---~~l~D~~~~----~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l 167 (171)
T 2yzh_A 99 SFNIQNV---TVASDFRYR----DMEKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKV 167 (171)
T ss_dssp HTTCCSS---EEEECTTTC----GGGGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHH
T ss_pred HcCCCCe---EEeecCccC----cHHHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHH
Confidence 3222 33 333221110 111123321 13689999999999998765 55567777655
No 55
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=86.03 E-value=3.9 Score=32.73 Aligned_cols=137 Identities=13% Similarity=0.187 Sum_probs=73.3
Q ss_pred cccceEEecCCceeehhhhcccceEEEEecCHh--HHHHHHhhchhhHHHHhhcC--cEEEEEeeCCCCCCCCccchHHH
Q 019918 173 LSNLKLRVDEKKIISVNNLRGIARLVICSGPAS--YIMESFKRSEPFTESLLERG--VLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 173 L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~~e--~V~~al~~Ae~~r~~L~~rg--VLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
+-.+.+.--+++.++|.+|+|..-+|..-.+.= .+...+.....+.+.+.+.+ |-||-|..|.. .+..+..
T Consensus 13 ~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~-----~d~~~~~ 87 (174)
T 1xzo_A 13 VEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPE-----NDKPKQL 87 (174)
T ss_dssp CCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTT-----TCCHHHH
T ss_pred cCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCC-----CCCHHHH
Confidence 334444445689999999999765444443321 33444445555666777776 99999888631 1112333
Q ss_pred HHHhhhhccceEEeecc----hhhHHHHHHHHHHH--------cCCCCCCCeEEEEeeCCeeecccCCCCc--HHHHHhc
Q 019918 249 KEFTRKRKRLWQLTPVY----VSEWSKWLDEQKRT--------AGISPESPVYLSLRLDGRVRGSGVGYPP--WNAFVAQ 314 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~----~~eW~~wi~eQ~e~--------Agv~~~~gVyI~LrlDGRVr~SG~G~Pp--W~~lv~e 314 (334)
.++...-.-.|.-+|+. ...-+.|-...... -++ ...+.+++|..||+|+.+=.|..+ -.++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~ 166 (174)
T 1xzo_A 88 KKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQV-IHQSSFYLVGPDGKVLKDYNGVENTPYDDIISD 166 (174)
T ss_dssp HHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSC-CSCCEEEEECTTSEEEEEEESSSSCCHHHHHHH
T ss_pred HHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCee-eeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHH
Confidence 44443322222111222 22233333221110 011 124578999999999998777654 4556554
Q ss_pred C
Q 019918 315 L 315 (334)
Q Consensus 315 L 315 (334)
|
T Consensus 167 l 167 (174)
T 1xzo_A 167 V 167 (174)
T ss_dssp H
T ss_pred H
Confidence 4
No 56
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=86.03 E-value=8.2 Score=30.78 Aligned_cols=135 Identities=12% Similarity=0.166 Sum_probs=75.3
Q ss_pred HHHHhhhhhcccceEEec--CCceeehhhh-cccceEEEEecCHhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCC
Q 019918 164 LARLSREESLSNLKLRVD--EKKIISVNNL-RGIARLVICSGPASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSF 240 (334)
Q Consensus 164 larisREe~L~rL~Vrl~--~~r~v~L~qL-Rg~aRvVIvAG~~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~ 240 (334)
+..+.-++.+-...+.-- +++.+++.++ ++..-+|...++ .+-. .+...+.-++|.+.++-||.|..+.
T Consensus 19 ~~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~--~C~~-C~~~~~~l~~l~~~~v~vv~v~~~~----- 90 (168)
T 2b1k_A 19 LESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWAT--WCPT-CRAEHQYLNQLSAQGIRVVGMNYKD----- 90 (168)
T ss_dssp CCCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECT--TCHH-HHHHHHHHHHHHHTTCCEEEEEESC-----
T ss_pred ccccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECC--CCHH-HHHHHHHHHHHHHCCCEEEEEECCC-----
Confidence 334445556666666554 6889999986 766555444433 2222 2233333445555589999888753
Q ss_pred CccchHHHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 241 EFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 241 ~f~~~e~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
..+...++...-.-.|...-.+.+ .. +. +.-++. .-+.++++..||+|+.+-.|..+...+.+.|.
T Consensus 91 ---~~~~~~~~~~~~~~~~~~~~~d~~--~~-~~---~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 156 (168)
T 2b1k_A 91 ---DRQKAISWLKELGNPYALSLFDGD--GM-LG---LDLGVY-GAPETFLIDGNGIIRYRHAGDLNPRVWEEEIK 156 (168)
T ss_dssp ---CHHHHHHHHHHHCCCCSEEEEETT--CH-HH---HHHTCC-SSSEEEEECTTSBEEEEEESCCCHHHHHHTTH
T ss_pred ---ChHHHHHHHHHcCCCCceeeECcc--hH-HH---HHcCcc-ccCEEEEECCCCeEEEEEeCCCCHHHHHHHHH
Confidence 122333333332222211001111 00 11 112452 35778999999999999999888888877664
No 57
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=85.73 E-value=3.8 Score=34.03 Aligned_cols=60 Identities=12% Similarity=0.037 Sum_probs=44.3
Q ss_pred ccceEEecCCceeehhhhcccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 019918 174 SNLKLRVDEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (334)
Q Consensus 174 ~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~d 234 (334)
-.+.+.-.+++.++|.+|+|. -+||.-.+ -..+...+...+.+.+++.+.|+-||-|..|
T Consensus 32 P~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D 94 (179)
T 3ixr_A 32 LNHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD 94 (179)
T ss_dssp HHCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC
T ss_pred CCeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 334444456899999999998 34444332 4567777888888889999999999988774
No 58
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=84.94 E-value=3 Score=36.61 Aligned_cols=139 Identities=6% Similarity=-0.035 Sum_probs=75.2
Q ss_pred HHHHhhhhhcccceEEec--CC--ceeehhhh-cccceEEEEecCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 019918 164 LARLSREESLSNLKLRVD--EK--KIISVNNL-RGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (334)
Q Consensus 164 larisREe~L~rL~Vrl~--~~--r~v~L~qL-Rg~aRvVIvAG~~e---~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg 235 (334)
|..+.-.+.+-.+.+.-- ++ +.++|+++ +|.. +||.-.++. .+...+..-+.+.+++.+.||-||-|..|.
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~-vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKY-CCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCE-EEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCe-EEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 444445555555555443 67 89999999 9864 344333222 345556666667778888999999888742
Q ss_pred CCCCCCccchHHHHHHhhhhccc----eEEeecchhhHHHHHHHHHHHcCCC----CCCCeEEEEeeCCeeecccCCC--
Q 019918 236 NIPSFEFEESEEMKEFTRKRKRL----WQLTPVYVSEWSKWLDEQKRTAGIS----PESPVYLSLRLDGRVRGSGVGY-- 305 (334)
Q Consensus 236 ~sp~~~f~~~e~~~~~~~~~~~~----w~A~Pv~~~eW~~wi~eQ~e~Agv~----~~~gVyI~LrlDGRVr~SG~G~-- 305 (334)
.+...++...-.+. -.-+|+..|.=.+ + .+.-|+. ...+.+++|..||+|+..-.|.
T Consensus 101 ---------~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~-~---~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~ 167 (221)
T 2c0d_A 101 ---------VYSHLAWKNMPIEKGGIGNVEFTLVSDINKD-I---SKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLP 167 (221)
T ss_dssp ---------HHHHHHHHHSCGGGTCCCSCSSEEEECTTSH-H---HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTT
T ss_pred ---------HHHHHHHHHHhhhhcCccCCceEEEECCchH-H---HHHcCCcccCCCccceEEEECCCCeEEEEEecCCC
Confidence 12233333322000 1112333231000 1 1112442 1246788999999999997663
Q ss_pred --CcHHHHHhcCC
Q 019918 306 --PPWNAFVAQLP 316 (334)
Q Consensus 306 --PpW~~lv~eLP 316 (334)
++..++++.|.
T Consensus 168 ~~~~~~ell~~l~ 180 (221)
T 2c0d_A 168 IGRNVQEVLRTID 180 (221)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 34566665543
No 59
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=84.47 E-value=0.99 Score=36.99 Aligned_cols=119 Identities=13% Similarity=0.207 Sum_probs=64.6
Q ss_pred cCCceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc
Q 019918 181 DEKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL 258 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~ 258 (334)
.+++.++|++|+|..-++..- ++ -..+..-+..-+.+.+++.+.|+.||-|..|. .+...++..+..-.
T Consensus 18 ~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~---------~~~~~~~~~~~~~~ 88 (157)
T 4g2e_A 18 TELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDP---------PFSNKAFKEHNKLN 88 (157)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSC---------HHHHHHHHHHTTCC
T ss_pred CCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccc---------hhHHHHHHHHcCCc
Confidence 458999999999975444432 32 23455556666777788899999999887642 22334444333333
Q ss_pred eEEeecchhhHHHHHHHHHHHcCCC------CC----CCeEEEEeeCCeeecccC-----CCCcHHHHHhcC
Q 019918 259 WQLTPVYVSEWSKWLDEQKRTAGIS------PE----SPVYLSLRLDGRVRGSGV-----GYPPWNAFVAQL 315 (334)
Q Consensus 259 w~A~Pv~~~eW~~wi~eQ~e~Agv~------~~----~gVyI~LrlDGRVr~SG~-----G~PpW~~lv~eL 315 (334)
| |+-.|. ..=+ .+.-|+. ++ .+..++|..||+|+.+.+ +-|+.+++++.|
T Consensus 89 ~---p~l~D~-~~~v---~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l 153 (157)
T 4g2e_A 89 F---TILSDY-NREV---VKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVV 153 (157)
T ss_dssp S---EEEECT-TSHH---HHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHH
T ss_pred E---EEEEcC-CcHH---HHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHH
Confidence 3 322111 0000 0111331 11 223578999999997754 556677766544
No 60
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=84.37 E-value=3.1 Score=33.87 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=61.0
Q ss_pred cCCceeehhhhcccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhcc
Q 019918 181 DEKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKR 257 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~ 257 (334)
.+++.++|++++|.. +||.-.+ -..+...+..-+.+.+++ .|+-||-|..|. .+...++...-.-
T Consensus 31 ~~G~~v~l~~~~gk~-vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d~---------~~~~~~~~~~~~~ 98 (165)
T 1q98_A 31 NDLADVALNDFASKR-KVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISADL---------PFAQARFCGAEGI 98 (165)
T ss_dssp TTSCEEEGGGGTTSE-EEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESSC---------HHHHTTCTTTTTC
T ss_pred CCCCEEehHHhCCCe-EEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCCC---------HHHHHHHHHHcCC
Confidence 458999999999964 3333221 223333344334444555 688888887642 1122222222222
Q ss_pred -ceEEeecchhhHHHHHHHHHHHcCCCCC--------CCeEEEEeeCCeeecccCCC-----CcHHHHHhcC
Q 019918 258 -LWQLTPVYVSEWSKWLDEQKRTAGISPE--------SPVYLSLRLDGRVRGSGVGY-----PPWNAFVAQL 315 (334)
Q Consensus 258 -~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~--------~gVyI~LrlDGRVr~SG~G~-----PpW~~lv~eL 315 (334)
.| |+..|.... +-.+.-|+... .+..++|..||+|+....|. |+..++++.|
T Consensus 99 ~~~---~~l~D~~~~---~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l 164 (165)
T 1q98_A 99 ENA---KTVSTFRNH---ALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVL 164 (165)
T ss_dssp TTE---EEEECTTCT---HHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTT
T ss_pred Cce---EEeeccccc---hHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhh
Confidence 23 332232100 01111233211 37889999999999988763 4455565544
No 61
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=83.47 E-value=4.6 Score=38.55 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=72.0
Q ss_pred cCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCcc-chHHHHHHhhhhccc
Q 019918 181 DEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFE-ESEEMKEFTRKRKRL 258 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~-~~e~~~~~~~~~~~~ 258 (334)
.+++.+++.++++..-+|....+ =..+...+..-+.+.+++.+.++.||-|..+... ++ ..++..++...-.-.
T Consensus 70 ~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~----~~d~~~~~~~~~~~~~l~ 145 (352)
T 2hyx_A 70 PGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYA----FEKVPGNVAKGAANLGIS 145 (352)
T ss_dssp GGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSG----GGGCHHHHHHHHHHHTCC
T ss_pred CCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCccc----ccCCHHHHHHHHHHcCCC
Confidence 35789999999987544444332 3445555666667777888889999999875311 11 122333333332222
Q ss_pred eEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhc
Q 019918 259 WQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQ 314 (334)
Q Consensus 259 w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~e 314 (334)
| |+..+.=.. -.+.-++. .-+.++++.+||+|+..-.|..++.++.+.
T Consensus 146 f---pv~~D~~~~----l~~~ygV~-~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~ 193 (352)
T 2hyx_A 146 Y---PIALDNNYA----TWTNYRNR-YWPAEYLIDATGTVRHIKFGEGDYNVTETL 193 (352)
T ss_dssp S---CEEECTTSH----HHHHTTCC-EESEEEEECTTSBEEEEEESBCCHHHHHHH
T ss_pred c---cEEeCCcHH----HHHHcCCC-ccCEEEEEeCCCeEEEEEcCCCCHHHHHHH
Confidence 2 332221000 01112442 247888999999999999998888776543
No 62
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=82.96 E-value=17 Score=29.46 Aligned_cols=114 Identities=16% Similarity=0.206 Sum_probs=72.1
Q ss_pred eEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhh-cCcEEEEEeeCCCCCCCCccchHHHHHHhhh
Q 019918 177 KLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLE-RGVLVVSFTTDGNIPSFEFEESEEMKEFTRK 254 (334)
Q Consensus 177 ~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~-rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~ 254 (334)
.+.-.++ .++|.++++..-+|...++ =..+...+...+.+.+.+.+ .++.||-|.+|. ..++..++..
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~--------~~~~~~~~~~- 102 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDE--------EEDDFNAYYA- 102 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC--------SHHHHHHHHT-
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCC--------CHHHHHHHHH-
Confidence 4555567 9999999986544444333 24555556566667777775 689999998853 1223333332
Q ss_pred hccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeC-CeeecccCCC
Q 019918 255 RKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLD-GRVRGSGVGY 305 (334)
Q Consensus 255 ~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlD-GRVr~SG~G~ 305 (334)
+..|...|+..+....=+.+ .-++. .-+-++++..| |+|..+..+.
T Consensus 103 -~~~~~~~~~~~~~~~~~l~~---~~~v~-~~Pt~~lid~~~G~iv~~~~~~ 149 (165)
T 3s9f_A 103 -KMPWLSIPFANRNIVEALTK---KYSVE-SIPTLIGLNADTGDTVTTRARH 149 (165)
T ss_dssp -TCSSEECCTTCHHHHHHHHH---HTTCC-SSSEEEEEETTTCCEEESCHHH
T ss_pred -hCCCcccccCchhHHHHHHH---HcCCC-CCCEEEEEeCCCCEEEecccHH
Confidence 35788888876444322222 23553 35789999998 9999886543
No 63
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=82.69 E-value=13 Score=27.75 Aligned_cols=122 Identities=13% Similarity=0.102 Sum_probs=70.3
Q ss_pred cceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
.+.+.--+++.+++.++++..-+|...++ =.+....+...+.+.+.+. ++-+|-|..+.+ .+...++..
T Consensus 7 ~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~--------~~~~~~~~~ 76 (136)
T 1zzo_A 7 QFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQ--------VPAMQEFVN 76 (136)
T ss_dssp CCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSC--------HHHHHHHHH
T ss_pred CcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCC--------HHHHHHHHH
Confidence 34444456899999999886655554443 3445555555555555554 888988887531 222233222
Q ss_pred hhcc-ceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcC
Q 019918 254 KRKR-LWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQL 315 (334)
Q Consensus 254 ~~~~-~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eL 315 (334)
...- .| |+..+..... .+.-++. .-+.++.+..||+|. .-.|..+..++.+.|
T Consensus 77 ~~~~~~~---~~~~d~~~~~----~~~~~i~-~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l 130 (136)
T 1zzo_A 77 KYPVKTF---TQLADTDGSV----WANFGVT-QQPAYAFVDPHGNVD-VVRGRMSQDELTRRV 130 (136)
T ss_dssp HTTCTTS---EEEECTTCHH----HHHTTCC-SSSEEEEECTTCCEE-EEESCCCHHHHHHHH
T ss_pred HcCCCce---EEEEcCCcHH----HHHcCCC-CCceEEEECCCCCEE-EEecCCCHHHHHHHH
Confidence 2211 22 2222221111 1122442 358899999999999 888988887776654
No 64
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=82.20 E-value=1.2 Score=36.91 Aligned_cols=127 Identities=16% Similarity=0.145 Sum_probs=64.6
Q ss_pred cceEEecCCceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHh
Q 019918 175 NLKLRVDEKKIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 252 (334)
Q Consensus 175 rL~Vrl~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~ 252 (334)
.+.+.-.+++.+++.+|++..-+|... .. -..+...+..-+.+.++ .+|-||-|..|.. +...++.
T Consensus 26 ~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D~~---------~~~~~~~ 93 (175)
T 1xvq_A 26 AFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKDLP---------FAQKRFC 93 (175)
T ss_dssp CCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESSCH---------HHHTTCC
T ss_pred CeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECCCH---------HHHHHHH
Confidence 334433468999999999865444433 22 23344444443333333 7888888887421 1111111
Q ss_pred hhhccceEEeecchhhHHHHHHHHHHHcCCCCC--------CCeEEEEeeCCeeecccCCC-----CcHHHHHhcCCCcc
Q 019918 253 RKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPE--------SPVYLSLRLDGRVRGSGVGY-----PPWNAFVAQLPPVK 319 (334)
Q Consensus 253 ~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~--------~gVyI~LrlDGRVr~SG~G~-----PpW~~lv~eLP~~~ 319 (334)
..-. +.-.|+..+.-.+ + .+.-++... .+.+++|.+||+|+.+-.|. |.+.++++.+....
T Consensus 94 ~~~~--~~~~~~l~D~~~~-~---~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 94 GAEG--TENVMPASAFRDS-F---GEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp --------CEEEEECTTSS-H---HHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred HHcC--CCCceEeeCCHHH-H---HHHhCCcccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 1111 1112333332111 1 112233221 26799999999999987642 34666766655443
No 65
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=81.81 E-value=17 Score=31.16 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=76.0
Q ss_pred cccceEEecC-CceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 173 LSNLKLRVDE-KKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 173 L~rL~Vrl~~-~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
+-.+.+.--+ ++.++|++|||..-+|..-++ =..+...+..-+.+.+++.+.|+.||-|..+.-. ..+.+..++..+
T Consensus 26 ~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~-~~e~d~~~~i~~ 104 (208)
T 2f8a_A 26 VYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFG-HQENAKNEEILN 104 (208)
T ss_dssp GGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCST-TTTCSCHHHHHH
T ss_pred cCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCccc-ccCCCCHHHHHH
Confidence 3344444345 899999999996533333222 1224444555566777788889999998875210 011222234444
Q ss_pred Hhh------hhccceEEee-cc------hhhHHHHHHHHHHH-c---------------------CCCCCCCeEEEEeeC
Q 019918 251 FTR------KRKRLWQLTP-VY------VSEWSKWLDEQKRT-A---------------------GISPESPVYLSLRLD 295 (334)
Q Consensus 251 ~~~------~~~~~w~A~P-v~------~~eW~~wi~eQ~e~-A---------------------gv~~~~gVyI~LrlD 295 (334)
+.. .-.-.|-..- ++ ...|. |+.++... . ++ ...+..++|.+|
T Consensus 105 f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~p~tflID~~ 182 (208)
T 2f8a_A 105 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFA-FLREALPAPSDDATALMTDPKLITWSPVCRNDV-AWNFEKFLVGPD 182 (208)
T ss_dssp HHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHH-HHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC-CSTTCEEEECTT
T ss_pred HHHhcccccccccceEEEEEeecCCCCccHHHH-HHHhcCCCccccchhhccccccccccccccCcc-ccCceEEEEcCC
Confidence 443 2122222110 01 01343 33332210 0 01 112568999999
Q ss_pred CeeecccCCCCcHHHHHhcCC
Q 019918 296 GRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 296 GRVr~SG~G~PpW~~lv~eLP 316 (334)
|+|+.+=.|..++.++.+.|.
T Consensus 183 G~i~~~~~g~~~~~~l~~~I~ 203 (208)
T 2f8a_A 183 GVPLRRYSRRFQTIDIEPDIE 203 (208)
T ss_dssp SCEEEEECTTSCGGGGHHHHH
T ss_pred CcEEEEeCCCCCHHHHHHHHH
Confidence 999999888888877766553
No 66
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=81.58 E-value=20 Score=29.21 Aligned_cols=134 Identities=12% Similarity=0.168 Sum_probs=73.5
Q ss_pred cccceEE-ecCCceeehhhhcccc-eEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHH
Q 019918 173 LSNLKLR-VDEKKIISVNNLRGIA-RLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMK 249 (334)
Q Consensus 173 L~rL~Vr-l~~~r~v~L~qLRg~a-RvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~ 249 (334)
+-.+.+. --+++.+++.++++.. -+|....+ =......+..-+.+.+++.+.+|.||.|..+..... +.+..+...
T Consensus 24 ~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~-~~d~~~~~~ 102 (196)
T 2ywi_A 24 APPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQY-PEDSPENMK 102 (196)
T ss_dssp CCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTC-GGGSHHHHH
T ss_pred CCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccc-cccCHHHHH
Confidence 3344454 3458999999999975 34333322 245566666667777888888999999988542110 011122333
Q ss_pred HHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccC---------CCCcHHHHHhcC
Q 019918 250 EFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGV---------GYPPWNAFVAQL 315 (334)
Q Consensus 250 ~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~---------G~PpW~~lv~eL 315 (334)
++.....-.| |+..+.=.. + .+.-++. .-+.++++.+||+|+.++. |.++..++.+.|
T Consensus 103 ~~~~~~~~~~---~~~~d~~~~-~---~~~~~v~-~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i 169 (196)
T 2ywi_A 103 KVAEELGYPF---PYLYDETQE-V---AKAYDAA-CTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAAL 169 (196)
T ss_dssp HHHHHHTCCS---CEEECSSCH-H---HHHHTCC-EESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHH
T ss_pred HHHHHcCCCc---eEEECCchH-H---HHHhCCC-CCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHH
Confidence 3333222222 222111000 0 1111442 2477899999999999854 555555554443
No 67
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=81.42 E-value=1.5 Score=39.07 Aligned_cols=109 Identities=12% Similarity=0.036 Sum_probs=63.3
Q ss_pred CceeehhhhcccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc-
Q 019918 183 KKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL- 258 (334)
Q Consensus 183 ~r~v~L~qLRg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~- 258 (334)
++.++|++|+|.. +||.-.+ -..+...+.....+.+++.++||-||-|..|. .+...++...-.+.
T Consensus 67 G~~vsLsd~~Gk~-vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~---------~~~~~~~~~~~~~~~ 136 (240)
T 3qpm_A 67 FKELKLSDYRGKY-LVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDS---------QFTHLAWIITPRKQG 136 (240)
T ss_dssp EEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSC---------HHHHHHHHHSCGGGT
T ss_pred CcEEEHHHhCCCE-EEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHHHhhc
Confidence 6799999999963 3333333 34566667777778888999999999988752 12222222221000
Q ss_pred ---eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCC
Q 019918 259 ---WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGY 305 (334)
Q Consensus 259 ---w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~ 305 (334)
-.-+|+-.|.-.+ -.+.-|+.. ..+-+++|..||+|+.+..|-
T Consensus 137 ~~~~~~fp~l~D~~~~----v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~ 187 (240)
T 3qpm_A 137 GLGPMKIPLLSDLTHQ----ISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMND 187 (240)
T ss_dssp CCCSCSSCEEECTTSH----HHHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCCCCceeEEeCchHH----HHHHhCCccccCCCccceEEEEcCCCeEEEEEecC
Confidence 1223333332111 111224421 235688999999999987663
No 68
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=81.41 E-value=17 Score=28.18 Aligned_cols=114 Identities=13% Similarity=0.100 Sum_probs=63.4
Q ss_pred ceeehhhhcccceEEEEecCH-hHHHHHHhhchhhHHHHhh-cCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccceEE
Q 019918 184 KIISVNNLRGIARLVICSGPA-SYIMESFKRSEPFTESLLE-RGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLWQL 261 (334)
Q Consensus 184 r~v~L~qLRg~aRvVIvAG~~-e~V~~al~~Ae~~r~~L~~-rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~w~A 261 (334)
+.+++.++++..-+|....+- .++...+ +.-++|.+ .+|.+|.|..+. ..+...++.....-.|..
T Consensus 33 ~~~~l~~~~gk~~ll~f~~~~C~~C~~~~----~~l~~l~~~~~v~~v~v~~~~--------~~~~~~~~~~~~~~~~~~ 100 (156)
T 1kng_A 33 PGLDPAAFKGKVSLVNVWASWCVPCHDEA----PLLTELGKDKRFQLVGINYKD--------AADNARRFLGRYGNPFGR 100 (156)
T ss_dssp CCBCGGGGTTSCEEEEEECTTCHHHHHHH----HHHHHHTTCTTSEEEEEEESC--------CHHHHHHHHHHHCCCCSE
T ss_pred ceechHHhCCCEEEEEEEcccCHhHHHHH----HHHHHHHhcCCeEEEEEECCC--------CHHHHHHHHHHcCCCCce
Confidence 899999999866555544432 2333322 22233333 349999998853 122233333332222221
Q ss_pred eecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHHHHHhcCC
Q 019918 262 TPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWNAFVAQLP 316 (334)
Q Consensus 262 ~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~~lv~eLP 316 (334)
+..+.-.. -.+.-++. .-+.++++..||+|+..-.|..++.++.+.|.
T Consensus 101 --~~~d~~~~----~~~~~~v~-~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~ 148 (156)
T 1kng_A 101 --VGVDANGR----ASIEWGVY-GVPETFVVGREGTIVYKLVGPITPDNLRSVLL 148 (156)
T ss_dssp --EEEETTSH----HHHHTTCC-SSCEEEEECTTSBEEEEEESCCCHHHHHHTHH
T ss_pred --eeeCchhH----HHHhcCcC-ccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHH
Confidence 11111111 11122452 35778899999999999999999888776653
No 69
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=79.92 E-value=9.5 Score=31.87 Aligned_cols=119 Identities=13% Similarity=0.069 Sum_probs=69.7
Q ss_pred CC--ceeehhhhcccceEEEE-ecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh--
Q 019918 182 EK--KIISVNNLRGIARLVIC-SGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR-- 255 (334)
Q Consensus 182 ~~--r~v~L~qLRg~aRvVIv-AG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~-- 255 (334)
++ +.++|.+|+|..-++.. +++ -..+..-+..-+.+.+++.+.||-||-|..|. .+...++...-
T Consensus 17 ~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~---------~~~~~~~~~~~~~ 87 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDT---------HFTHKAWHSSSET 87 (186)
T ss_dssp TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC---------HHHHHHHHHHCTT
T ss_pred CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHcCc
Confidence 46 89999999985333332 222 23566667777777888888999999988752 22333333332
Q ss_pred --ccceEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCC----cHHHHHhcCC
Q 019918 256 --KRLWQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYP----PWNAFVAQLP 316 (334)
Q Consensus 256 --~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~P----pW~~lv~eLP 316 (334)
.-.| |+..+.=.+ + .+.-|+.. ..+..++|..||+|+..-.|.. +..++++.|.
T Consensus 88 ~~~~~f---p~l~D~~~~-~---~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~ 152 (186)
T 1n8j_A 88 IAKIKY---AMIGDPTGA-L---TRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIK 152 (186)
T ss_dssp GGGCCS---EEEECTTSH-H---HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred ccCCce---eEEECCchH-H---HHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 2223 333221111 1 11124421 1467889999999999887642 4666666554
No 70
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=79.60 E-value=8.9 Score=33.10 Aligned_cols=120 Identities=7% Similarity=0.038 Sum_probs=68.0
Q ss_pred CC--ceeehhhh-cccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh
Q 019918 182 EK--KIISVNNL-RGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR 255 (334)
Q Consensus 182 ~~--r~v~L~qL-Rg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~ 255 (334)
++ +.++|.++ ++.. +||.-.+ -..+...+..-+.+.+++.+.||-||-|..|. .+...++...-
T Consensus 38 ~G~~~~v~l~d~~~gk~-vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~---------~~~~~~~~~~~ 107 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKY-VLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDS---------KYTHLAWKKTP 107 (213)
T ss_dssp TSCEEEEEGGGGTTTCE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSC---------HHHHHHHHSSC
T ss_pred CCceeEEeHHHHcCCCe-EEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC---------HHHHHHHHHHH
Confidence 57 89999999 8864 3443332 33555666666677788888999999998752 12223332221
Q ss_pred ccc----eEEeecchhhHHHHHHHHHHHcCCCC----CCCeEEEEeeCCeeecccCCCCc----HHHHHhcC
Q 019918 256 KRL----WQLTPVYVSEWSKWLDEQKRTAGISP----ESPVYLSLRLDGRVRGSGVGYPP----WNAFVAQL 315 (334)
Q Consensus 256 ~~~----w~A~Pv~~~eW~~wi~eQ~e~Agv~~----~~gVyI~LrlDGRVr~SG~G~Pp----W~~lv~eL 315 (334)
.+. -.-+|+-.|.-. +-.+.-|+.. ..+.+++|..||+|+.+..|..+ -+++++.|
T Consensus 108 ~~~~g~~~~~fp~l~D~~~----~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l 175 (213)
T 2i81_A 108 LAKGGIGNIKHTLLSDITK----SISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRII 175 (213)
T ss_dssp GGGTCCCSCSSEEEECTTS----HHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHH
T ss_pred HhhCCccCCCceEEECCch----HHHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 000 012244333211 0111224431 24568899999999999877533 45555544
No 71
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=76.60 E-value=7.1 Score=33.66 Aligned_cols=120 Identities=13% Similarity=0.041 Sum_probs=68.3
Q ss_pred CCceeehhhhcccceEEEEecCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc
Q 019918 182 EKKIISVNNLRGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL 258 (334)
Q Consensus 182 ~~r~v~L~qLRg~aRvVIvAG~~---e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~ 258 (334)
+++.++|.+++|.. +||.-.++ ..+...+..-+.+.+++.+.||-||-|..|. .+...++...-.+.
T Consensus 37 ~g~~v~l~d~~Gk~-vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~---------~~~~~~~~~~~~~~ 106 (211)
T 2pn8_A 37 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDS---------QFTHLAWINTPRRQ 106 (211)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC---------HHHHHHHHTSCGGG
T ss_pred CCcEEEHHHhCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHhhhc
Confidence 35899999999964 44433322 2455666666777788888999999998742 12233333221000
Q ss_pred ----eEEeecchhhHHHHHHHHHHHcCCC-----CCCCeEEEEeeCCeeecccCCCC----cHHHHHhcC
Q 019918 259 ----WQLTPVYVSEWSKWLDEQKRTAGIS-----PESPVYLSLRLDGRVRGSGVGYP----PWNAFVAQL 315 (334)
Q Consensus 259 ----w~A~Pv~~~eW~~wi~eQ~e~Agv~-----~~~gVyI~LrlDGRVr~SG~G~P----pW~~lv~eL 315 (334)
-.-.|+..|.-.+. .+.-|+. ...+.+++|..||+|+....|.. +.++++..|
T Consensus 107 ~g~~~~~fp~l~D~~~~~----~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l 172 (211)
T 2pn8_A 107 GGLGPIRIPLLSDLTHQI----SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLV 172 (211)
T ss_dssp TCCCSCSSCEEECTTSHH----HHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHH
T ss_pred cCccCCceEEEECCchHH----HHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 11224333321111 1112442 12568899999999999987642 345665544
No 72
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=76.42 E-value=29 Score=28.05 Aligned_cols=107 Identities=12% Similarity=0.162 Sum_probs=61.2
Q ss_pred CC--ceeehhh-hcccceEEEEecCH---hHHH-HHHhhchhhHHHHhhcCcE-EEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 182 EK--KIISVNN-LRGIARLVICSGPA---SYIM-ESFKRSEPFTESLLERGVL-VVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 182 ~~--r~v~L~q-LRg~aRvVIvAG~~---e~V~-~al~~Ae~~r~~L~~rgVL-VVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
+| +.++|++ ++|.. +||.-.++ ..+. .-+..-+.+.+++.+.||- ||-|..|. .+...++..
T Consensus 21 ~G~~~~~~l~~~~~gk~-vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~---------~~~~~~~~~ 90 (162)
T 1tp9_A 21 QDQLQEVSVHSLVAGKK-VILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND---------PFVMKAWAK 90 (162)
T ss_dssp TSCEEEEESHHHHTTSE-EEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC---------HHHHHHHHH
T ss_pred CCCceeEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC---------HHHHHHHHH
Confidence 57 8999999 89864 44433322 3444 4455556677788889999 99887741 223344443
Q ss_pred hhcc--ceEEeecchhhHHHHHHHHHHHcCCCC-----C-----CCeEEEEeeCCeeecccCCCC
Q 019918 254 KRKR--LWQLTPVYVSEWSKWLDEQKRTAGISP-----E-----SPVYLSLRLDGRVRGSGVGYP 306 (334)
Q Consensus 254 ~~~~--~w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~-----~gVyI~LrlDGRVr~SG~G~P 306 (334)
+-.- .| |+-.|.=.+ -.+.-|+.. + .+..++|. ||+|+...+|-|
T Consensus 91 ~~~~~~~~---~~l~D~~~~----~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~~~~~ 147 (162)
T 1tp9_A 91 SYPENKHV---KFLADGSAT----YTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAANIEGG 147 (162)
T ss_dssp TCTTCSSE---EEEECTTSH----HHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEEECSS
T ss_pred hcCCCCCe---EEEECCCch----HHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEEeeCC
Confidence 3222 23 443221111 111224431 1 34556669 999999988863
No 73
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=74.14 E-value=27 Score=27.51 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=72.1
Q ss_pred eEEecCCceeehhhhcccceEEEEecCH-h-HHHHHHhhchhhHHHHhhc---CcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 177 KLRVDEKKIISVNNLRGIARLVICSGPA-S-YIMESFKRSEPFTESLLER---GVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 177 ~Vrl~~~r~v~L~qLRg~aRvVIvAG~~-e-~V~~al~~Ae~~r~~L~~r---gVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
.+.-.++ .+++.++++..-+|....+- . .+...+..-+.+.+++.+. +|-||-|..|.. .+..+...++
T Consensus 20 ~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~-----~d~~~~~~~~ 93 (172)
T 2k6v_A 20 ALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE-----RDPPEVADRY 93 (172)
T ss_dssp EEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT-----TCCHHHHHHH
T ss_pred EEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC-----CCCHHHHHHH
Confidence 3333457 99999999875444443332 2 3566666666666666665 788998887631 1112334444
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHcCCC--------------CCCCeEEEEeeCCeeecccCCCC--cHHHHHhcC
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTAGIS--------------PESPVYLSLRLDGRVRGSGVGYP--PWNAFVAQL 315 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~--------------~~~gVyI~LrlDGRVr~SG~G~P--pW~~lv~eL 315 (334)
...-...|....-. ++ -+.+-.+.-|+. ..-+.++.+. ||+|+.+-.|.. +..++.+.|
T Consensus 94 ~~~~~~~~~~l~d~-~~---~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l 168 (172)
T 2k6v_A 94 AKAFHPSFLGLSGS-PE---AVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADL 168 (172)
T ss_dssp HHHHCTTEEEECCC-HH---HHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHH
T ss_pred HHHhCCCcEEEeCC-HH---HHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHH
Confidence 44444455443222 11 111111111321 1246788899 999999988877 566666554
No 74
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=73.53 E-value=11 Score=31.34 Aligned_cols=118 Identities=12% Similarity=0.083 Sum_probs=66.5
Q ss_pred ceeehhhhcccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc--
Q 019918 184 KIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL-- 258 (334)
Q Consensus 184 r~v~L~qLRg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~-- 258 (334)
+.++|.++++.. +||.-.+ =..+...+...+.+.+++.+.||-||-|..|. .+...++...-.+.
T Consensus 25 ~~v~l~~~~gk~-vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~---------~~~~~~~~~~~~~~~~ 94 (197)
T 1qmv_A 25 KEVKLSDYKGKY-VVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDS---------QFTHLAWINTPRKEGG 94 (197)
T ss_dssp EEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC---------HHHHHHHHTSCGGGTC
T ss_pred cEEEHHHHCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHHHhhCC
Confidence 899999999964 4443332 23566666666777888888999999998853 11222222211000
Q ss_pred --eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCC----cHHHHHhcC
Q 019918 259 --WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYP----PWNAFVAQL 315 (334)
Q Consensus 259 --w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~P----pW~~lv~eL 315 (334)
-.-+|+..+.=.+ +. +.-++.. .-+.++++.+||+|+.+-.|.. +.++++..|
T Consensus 95 ~~~~~~p~l~D~~~~-~~---~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l 158 (197)
T 1qmv_A 95 LGPLNIPLLADVTRR-LS---EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLV 158 (197)
T ss_dssp CCSCSSCEEECTTCH-HH---HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHH
T ss_pred CCCCceEEEECCcHH-HH---HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHH
Confidence 1122332221111 11 1123321 2457899999999999966643 356666544
No 75
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=72.44 E-value=25 Score=29.12 Aligned_cols=114 Identities=11% Similarity=0.120 Sum_probs=62.7
Q ss_pred ceEE-ecCCceeehhhh-cccceEEEE-e-cC-HhHHHH-HHhhchhhHHHHhhcCc-EEEEEeeCCCCCCCCccchHHH
Q 019918 176 LKLR-VDEKKIISVNNL-RGIARLVIC-S-GP-ASYIME-SFKRSEPFTESLLERGV-LVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 176 L~Vr-l~~~r~v~L~qL-Rg~aRvVIv-A-G~-~e~V~~-al~~Ae~~r~~L~~rgV-LVVPV~~dg~sp~~~f~~~e~~ 248 (334)
..+. -.+++.++|+++ ++.. +||. . ++ -..+.. -+..-+.+.+++.+.|| -||-|..|. .+..
T Consensus 12 f~l~~~~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~---------~~~~ 81 (167)
T 2wfc_A 12 VTVFGATPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND---------SFVM 81 (167)
T ss_dssp CEEESSSTTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC---------HHHH
T ss_pred cEeecCCCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC---------HHHH
Confidence 3444 345799999999 8864 3333 2 33 234555 55566667778888999 999998742 2233
Q ss_pred HHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCC----------CCCeEEEEeeCCeeecccCCC
Q 019918 249 KEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISP----------ESPVYLSLRLDGRVRGSGVGY 305 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~----------~~gVyI~LrlDGRVr~SG~G~ 305 (334)
.++..+-.-.. -.|+-.|.=.+.. +.-|+.. ..+..++| .||+|+...++.
T Consensus 82 ~~~~~~~~~~~-~fp~l~D~~~~~~----~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~~~~ 142 (167)
T 2wfc_A 82 DAWGKAHGADD-KVQMLADPGGAFT----KAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVNVEP 142 (167)
T ss_dssp HHHHHHTTCTT-TSEEEECTTSHHH----HHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEEECT
T ss_pred HHHHHhcCCCc-ceEEEECCCCcHH----HHcCCccccccccCcccceEEEEEE-eCCEEEEEEecC
Confidence 33333322220 0233322211111 1123321 13566666 899999998873
No 76
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=72.26 E-value=31 Score=26.54 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=68.9
Q ss_pred ceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhh-cCcEEEEEeeCCCCCCCCccchHHHHHHhh
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLE-RGVLVVSFTTDGNIPSFEFEESEEMKEFTR 253 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~-rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~ 253 (334)
+.+.-.+++.+++.++++..-+|....+ =......+...+.+.+.+.+ .++.||-|..|. ..+...++..
T Consensus 11 f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~--------~~~~~~~~~~ 82 (144)
T 1i5g_A 11 TNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDE--------SAEDFKDYYA 82 (144)
T ss_dssp SEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS--------SHHHHHHHHT
T ss_pred eEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC--------CHHHHHHHHH
Confidence 4554456899999999987544444443 23455555555666667764 689999988753 1223333322
Q ss_pred hhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEe-eCCeeeccc
Q 019918 254 KRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLR-LDGRVRGSG 302 (334)
Q Consensus 254 ~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~Lr-lDGRVr~SG 302 (334)
+..|...|+...+...=+. +.-++. .-+.++.+. +||+|+.+.
T Consensus 83 --~~~~~~~~~~~~d~~~~~~---~~~~v~-~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 83 --KMPWLALPFEDRKGMEFLT---TGFDVK-SIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp --TCSSEECCTTCHHHHHHHH---HHTTCC-SSSEEEEEETTTCCEEESC
T ss_pred --hCCccccccCchHHHHHHH---HHcCCC-CCCEEEEEECCCCcEEecc
Confidence 2567778876322222222 223553 357899999 999998775
No 77
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=71.74 E-value=31 Score=29.46 Aligned_cols=126 Identities=11% Similarity=0.132 Sum_probs=71.2
Q ss_pred hhhhcccceEEecCCceeehhhhcccc-eEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchH
Q 019918 169 REESLSNLKLRVDEKKIISVNNLRGIA-RLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESE 246 (334)
Q Consensus 169 REe~L~rL~Vrl~~~r~v~L~qLRg~a-RvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e 246 (334)
-++.+-.+.+.-.+++.++|.++++.. -+|....+ =..+...+...+.+.+++.+.||.||-|..+..... +.+..+
T Consensus 34 ~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~-~~d~~~ 112 (218)
T 3u5r_E 34 LGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAF-PEETLE 112 (218)
T ss_dssp TTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTC-GGGSHH
T ss_pred CCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccc-ccCCHH
Confidence 344455555655678999999999984 33333222 234556666677788888889999999988531110 112223
Q ss_pred HHHHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccC
Q 019918 247 EMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGV 303 (334)
Q Consensus 247 ~~~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~ 303 (334)
...++.....-.| |+..+.=. -+ .+.-++. ..+-++++.+||+|+.+|.
T Consensus 113 ~~~~~~~~~~~~~---~~l~D~~~-~~---~~~~~v~-~~P~~~liD~~G~i~~~g~ 161 (218)
T 3u5r_E 113 RVGAEVKAYGYGF---PYLKDASQ-SV---AKAYGAA-CTPDFFLYDRERRLVYHGQ 161 (218)
T ss_dssp HHHHHHHHHTCCS---CEEECTTC-HH---HHHHTCC-EESEEEEECTTCBEEEEEC
T ss_pred HHHHHHHHhCCCc---cEEECCcc-HH---HHHcCCC-CCCeEEEECCCCcEEEecc
Confidence 3333333322222 22222100 01 1122452 2478899999999998764
No 78
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=71.50 E-value=7.4 Score=32.49 Aligned_cols=116 Identities=9% Similarity=0.083 Sum_probs=65.5
Q ss_pred ceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh----cc
Q 019918 184 KIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR----KR 257 (334)
Q Consensus 184 r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~----~~ 257 (334)
+.+++.++++..-+|... ++ =..+...+..-+.+.+++.+.+|-||-|..|. .+...++...- .-
T Consensus 36 ~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~---------~~~~~~~~~~~~~~~~~ 106 (195)
T 2bmx_A 36 TTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS---------EFAHFQWRAQHNDLKTL 106 (195)
T ss_dssp EEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC---------HHHHHHHHHHCTTGGGC
T ss_pred cEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHhccccCC
Confidence 899999999854333332 22 22445555556667777888899999998752 22233333221 12
Q ss_pred ceEEeecchhhHHHHHHHHHHHcCCCC----CCCeEEEEeeCCeeecccCCCC----cHHHHHhcC
Q 019918 258 LWQLTPVYVSEWSKWLDEQKRTAGISP----ESPVYLSLRLDGRVRGSGVGYP----PWNAFVAQL 315 (334)
Q Consensus 258 ~w~A~Pv~~~eW~~wi~eQ~e~Agv~~----~~gVyI~LrlDGRVr~SG~G~P----pW~~lv~eL 315 (334)
. .|+..+.=.+. .+.-++.. .-+.++++..||+|+.+-.|.. +..++.+.|
T Consensus 107 ~---~~~~~d~~~~~----~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 165 (195)
T 2bmx_A 107 P---FPMLSDIKREL----SQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVL 165 (195)
T ss_dssp C---SCEEECTTSHH----HHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHH
T ss_pred c---eeEEeCCchHH----HHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHH
Confidence 2 23322211111 11123321 3568899999999999988764 345555443
No 79
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=70.68 E-value=2.1 Score=38.75 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=63.0
Q ss_pred CCceeehhhhcccceEEEEecCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc
Q 019918 182 EKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL 258 (334)
Q Consensus 182 ~~r~v~L~qLRg~aRvVIvAG~~e---~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~ 258 (334)
+++.++|.+|+|.. +||.-.++. .+..-+.....+.+++.++||-||-|..|. .+...++...-.+.
T Consensus 80 ~G~~vsLsd~kGK~-vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~---------~~~~~~~~~~~~~~ 149 (254)
T 3tjj_A 80 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDS---------QFTHLAWINTPRRQ 149 (254)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSC---------HHHHHHHHTSCGGG
T ss_pred CCcEEeHHHHCCCe-EEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCC---------HHHHHHHHHHHHHh
Confidence 46899999999974 444444332 345556666677788889999999998752 12222222211000
Q ss_pred ----eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCCc
Q 019918 259 ----WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYPP 307 (334)
Q Consensus 259 ----w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~Pp 307 (334)
-.-+|+-.|.-.+. .+.-|+.. ..+-.++|..||+|+.+-.|-.+
T Consensus 150 ~g~~~~~fp~l~D~~~~v----a~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~ 203 (254)
T 3tjj_A 150 GGLGPIRIPLLSDLTHQI----SKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLP 203 (254)
T ss_dssp TSCCSCSSCEEECTTSHH----HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTT
T ss_pred cCCcccccceeeCcHHHH----HHHcCCccccCCCccceEEEECCCCeEEEEEecCCC
Confidence 01223333321111 11124321 13568899999999999776433
No 80
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=69.82 E-value=11 Score=31.76 Aligned_cols=119 Identities=9% Similarity=0.058 Sum_probs=65.7
Q ss_pred ceeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhcc--c-
Q 019918 184 KIISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKR--L- 258 (334)
Q Consensus 184 r~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~--~- 258 (334)
+.++|.+++|..-+|... ++ -..+...+..-+.+.+++.+.||-||-|..|. .+...++...-.. .
T Consensus 27 ~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~---------~~~~~~~~~~~~~~~~~ 97 (202)
T 1uul_A 27 KKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDS---------EYSHLAWTSIERKRGGL 97 (202)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSC---------HHHHHHHHHSCGGGTCC
T ss_pred cEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC---------HHHHHHHHHHHHhhCCC
Confidence 899999999864333332 22 23556666666777888888999999998752 1222222222100 0
Q ss_pred -eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCCcH----HHHHhcC
Q 019918 259 -WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYPPW----NAFVAQL 315 (334)
Q Consensus 259 -w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~PpW----~~lv~eL 315 (334)
-.-.|+..+.=.+ +. +.-|+.. .-+.++++..||+|+.+-.|..+. ++++..|
T Consensus 98 ~~~~~p~l~D~~~~-~~---~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l 160 (202)
T 1uul_A 98 GQMNIPILADKTKC-IM---KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLV 160 (202)
T ss_dssp CSCSSCEEECTTCH-HH---HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHH
T ss_pred CCCceeEEECCchH-HH---HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHH
Confidence 1112332221011 11 1123321 245789999999999997775443 5554433
No 81
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=63.91 E-value=11 Score=32.53 Aligned_cols=110 Identities=14% Similarity=0.110 Sum_probs=62.0
Q ss_pred CCceeehhhhcccceEEEEecC---HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccc
Q 019918 182 EKKIISVNNLRGIARLVICSGP---ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRL 258 (334)
Q Consensus 182 ~~r~v~L~qLRg~aRvVIvAG~---~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~ 258 (334)
+++.++|.++++.. +||.--+ =..+...+..-+.+.+++.++||-||-|..|. .+...++...-...
T Consensus 45 ~g~~v~l~d~~Gk~-vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~---------~~~~~~~~~~~~~~ 114 (220)
T 1zye_A 45 EFKEISLDDFKGKY-LVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDS---------HFSHLAWINTPRKN 114 (220)
T ss_dssp SEEEEEGGGGTTSE-EEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSC---------HHHHHHHHTSCGGG
T ss_pred CCcEEEHHHhCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC---------HHHHHHHHHHHHHh
Confidence 46899999999943 3333232 23455556666667788888999999998852 11222222211000
Q ss_pred ----eEEeecchhhHHHHHHHHHHHcCCC-C----CCCeEEEEeeCCeeecccCCC
Q 019918 259 ----WQLTPVYVSEWSKWLDEQKRTAGIS-P----ESPVYLSLRLDGRVRGSGVGY 305 (334)
Q Consensus 259 ----w~A~Pv~~~eW~~wi~eQ~e~Agv~-~----~~gVyI~LrlDGRVr~SG~G~ 305 (334)
-.-.|+..|.-.+ + .+.-|+. . .-+-++++..||+|+.+..|.
T Consensus 115 ~g~~~~~fp~l~D~~~~-i---~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~ 166 (220)
T 1zye_A 115 GGLGHMNIALLSDLTKQ-I---SRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVND 166 (220)
T ss_dssp TCCCSCSSEEEECTTSH-H---HHHTTCEETTTTEECEEEEEECTTSBEEEEEEEC
T ss_pred CCCcCCceEEEECCcHH-H---HHHhCCeecCCCcccceEEEECCCCEEEEEEecC
Confidence 0123433332111 1 1112432 0 246789999999999988775
No 82
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=63.62 E-value=23 Score=30.12 Aligned_cols=52 Identities=15% Similarity=0.263 Sum_probs=35.7
Q ss_pred CC-ceeehhh-hcccceEEEEe--cC-HhHHHH-HHhhchhhHHHHhhcCcE-EEEEeeC
Q 019918 182 EK-KIISVNN-LRGIARLVICS--GP-ASYIME-SFKRSEPFTESLLERGVL-VVSFTTD 234 (334)
Q Consensus 182 ~~-r~v~L~q-LRg~aRvVIvA--G~-~e~V~~-al~~Ae~~r~~L~~rgVL-VVPV~~d 234 (334)
++ +.++|++ ++|. .+||+- ++ =..+.. =+..-+.+.+++.+.||- ||-|..|
T Consensus 43 ~G~~~v~L~d~~~Gk-~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 43 DGPVEVTTELLFKGK-RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp TEEEEEEHHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCceEEeHHHHhCCC-CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 67 8999999 8886 344432 32 234454 255566667888999998 9888774
No 83
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=62.24 E-value=25 Score=31.62 Aligned_cols=120 Identities=12% Similarity=0.131 Sum_probs=63.2
Q ss_pred cCCceeehhhhcccceEEEEecCH--hHHH--HHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhc
Q 019918 181 DEKKIISVNNLRGIARLVICSGPA--SYIM--ESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRK 256 (334)
Q Consensus 181 ~~~r~v~L~qLRg~aRvVIvAG~~--e~V~--~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~ 256 (334)
.+++.++|++++|..-|+...-+. ..+. ..+.....|.+.+ .||-||-|..|. .+...++..+-.
T Consensus 36 ~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~~--~gv~VvgIS~Ds---------~~~~~~f~~~~g 104 (224)
T 3keb_A 36 DQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDSW--PHLKLIVITVDS---------PSSLARARHEHG 104 (224)
T ss_dssp TTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTTC--TTSEEEEEESSC---------HHHHHHHHHHHC
T ss_pred CCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHHc--CCCEEEEEECCC---------HHHHHHHHHHcC
Confidence 458999999999974333332222 1122 0011111222223 789888887642 123333333322
Q ss_pred cceEEeecchhhH-HHHHHHHHHHcCCCCC--------CCeEEEEeeCCeeecccC-----CCCcHHHHHhcCCC
Q 019918 257 RLWQLTPVYVSEW-SKWLDEQKRTAGISPE--------SPVYLSLRLDGRVRGSGV-----GYPPWNAFVAQLPP 317 (334)
Q Consensus 257 ~~w~A~Pv~~~eW-~~wi~eQ~e~Agv~~~--------~gVyI~LrlDGRVr~SG~-----G~PpW~~lv~eLP~ 317 (334)
-. -.|+-.|.+ .+.. +.-|+..+ .+..++|..||+|+.+.+ +.|+++++++.|-.
T Consensus 105 l~--~fplLsD~~~~~va----k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 105 LP--NIALLSTLRGRDFH----KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp CT--TCEEEESTTCTTHH----HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred CC--CceEEEcCCchHHH----HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 20 134444443 1111 12244221 467889999999998875 46889988887643
No 84
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=60.89 E-value=44 Score=28.69 Aligned_cols=120 Identities=11% Similarity=0.127 Sum_probs=65.4
Q ss_pred CCc--eeehhh-hcccceEEEEe-cC-HhHHH-HHHhhchhhHHHHhhcCc-EEEEEeeCCCCCCCCccchHHHHHHhhh
Q 019918 182 EKK--IISVNN-LRGIARLVICS-GP-ASYIM-ESFKRSEPFTESLLERGV-LVVSFTTDGNIPSFEFEESEEMKEFTRK 254 (334)
Q Consensus 182 ~~r--~v~L~q-LRg~aRvVIvA-G~-~e~V~-~al~~Ae~~r~~L~~rgV-LVVPV~~dg~sp~~~f~~~e~~~~~~~~ 254 (334)
+++ .++|++ ++|..-|+... ++ -..+. .-+..-+.+.+++.+.|+ -||-|..|. .+...++..+
T Consensus 19 ~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~---------~~~~~~~~~~ 89 (241)
T 1nm3_A 19 GDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND---------TFVMNAWKED 89 (241)
T ss_dssp TTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC---------HHHHHHHHHH
T ss_pred CCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC---------HHHHHHHHHh
Confidence 566 899999 89864333332 22 23444 445555666777888999 899988742 2233344333
Q ss_pred hccceEEeecchhhHHHHHHHHHHHcCCCC----------CCCeEEEEeeCCeeecccCCC---------CcHHHHHhcC
Q 019918 255 RKRLWQLTPVYVSEWSKWLDEQKRTAGISP----------ESPVYLSLRLDGRVRGSGVGY---------PPWNAFVAQL 315 (334)
Q Consensus 255 ~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~----------~~gVyI~LrlDGRVr~SG~G~---------PpW~~lv~eL 315 (334)
-.-. -.|+-.|.=.+. .+.-|+.. ..+..+++ .||+|+..-.|. +.-+++++.|
T Consensus 90 ~~~~--~~~~l~D~~~~~----~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l 162 (241)
T 1nm3_A 90 EKSE--NISFIPDGNGEF----TEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 162 (241)
T ss_dssp TTCT--TSEEEECTTSHH----HHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHH
T ss_pred cCCC--ceEEEECCCcHH----HHHhCceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHh
Confidence 2221 023332221111 11123321 12445666 899999987775 3456777666
Q ss_pred CC
Q 019918 316 PP 317 (334)
Q Consensus 316 P~ 317 (334)
.+
T Consensus 163 ~~ 164 (241)
T 1nm3_A 163 AP 164 (241)
T ss_dssp CT
T ss_pred hh
Confidence 54
No 85
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=59.56 E-value=16 Score=29.93 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=59.6
Q ss_pred eeehhhhcccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh----ccc
Q 019918 185 IISVNNLRGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR----KRL 258 (334)
Q Consensus 185 ~v~L~qLRg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~----~~~ 258 (334)
.+++.+|+|..-+|... ++ =..+...+...+.+.+++.+.++-||-|..|. .+...++...- .-.
T Consensus 23 ~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~---------~~~~~~~~~~~~~~~~~~ 93 (187)
T 1we0_A 23 EVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT---------HFVHKAWHENSPAVGSIE 93 (187)
T ss_dssp EEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC---------HHHHHHHHHSCHHHHTCC
T ss_pred EecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC---------HHHHHHHHHHhccccCCC
Confidence 99999999854333332 22 22444555556667777888899999988753 12222222221 122
Q ss_pred eEEeecchhhHHHHHHHHHHHcCCCC-----CCCeEEEEeeCCeeecccCCCC
Q 019918 259 WQLTPVYVSEWSKWLDEQKRTAGISP-----ESPVYLSLRLDGRVRGSGVGYP 306 (334)
Q Consensus 259 w~A~Pv~~~eW~~wi~eQ~e~Agv~~-----~~gVyI~LrlDGRVr~SG~G~P 306 (334)
| |+..+.= . +-.+.-|+.. .-+.++++.+||+|+.+-.|..
T Consensus 94 ~---~~~~d~~-~---~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~ 139 (187)
T 1we0_A 94 Y---IMIGDPS-Q---TISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINAD 139 (187)
T ss_dssp S---EEEECTT-C---HHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred c---eEEECCc-h---HHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCC
Confidence 2 3322210 0 1111224421 3468899999999999988764
No 86
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=58.36 E-value=8.4 Score=31.77 Aligned_cols=121 Identities=11% Similarity=0.146 Sum_probs=64.6
Q ss_pred cCCceeehhhh--cccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhc
Q 019918 181 DEKKIISVNNL--RGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRK 256 (334)
Q Consensus 181 ~~~r~v~L~qL--Rg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~ 256 (334)
.+++.++|+++ ||..-|++.. ++ =..+..-+..-+.+.+++.+.||.||-|..|. .+...++.....
T Consensus 19 ~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~---------~~~~~~~~~~~~ 89 (164)
T 4gqc_A 19 QDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDS---------PWCLKKFKDENR 89 (164)
T ss_dssp TTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSC---------HHHHHHHHHHTT
T ss_pred CCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCC---------HHHHHHHHHhcC
Confidence 45899999999 5543333322 21 11222334445566778899999999887642 223333333322
Q ss_pred cceEEeecchhhHHHHHHHHHHHcCCCC---------CCCeEEEEeeCCeeeccc-----CCCCcHHHHHhcCCC
Q 019918 257 RLWQLTPVYVSEWSKWLDEQKRTAGISP---------ESPVYLSLRLDGRVRGSG-----VGYPPWNAFVAQLPP 317 (334)
Q Consensus 257 ~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~---------~~gVyI~LrlDGRVr~SG-----~G~PpW~~lv~eLP~ 317 (334)
-.| |+-.|.=.+ + .+.-|+-. ..+..++|..||+|+.+- .+.|+.++++++|..
T Consensus 90 ~~f---p~l~D~~~~-v---~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 157 (164)
T 4gqc_A 90 LAF---NLLSDYNRE-V---IKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANK 157 (164)
T ss_dssp CCS---EEEECTTSH-H---HHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHH
T ss_pred ccc---ceeecCchH-H---HHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 222 322111000 0 01113311 123457899999999764 456777888776643
No 87
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=57.90 E-value=25 Score=29.14 Aligned_cols=121 Identities=7% Similarity=-0.027 Sum_probs=65.4
Q ss_pred CCc---eeehhhh-cccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhh
Q 019918 182 EKK---IISVNNL-RGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKR 255 (334)
Q Consensus 182 ~~r---~v~L~qL-Rg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~ 255 (334)
+|+ .++|.++ +|..-+|... ++ -..+...+..-+.+.+++.+.|+-||-|..|. .+...++...-
T Consensus 18 ~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~---------~~~~~~~~~~~ 88 (198)
T 1zof_A 18 NNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS---------EQVHFAWKNTP 88 (198)
T ss_dssp TSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC---------HHHHHHHHTSC
T ss_pred CCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC---------HHHHHHHHHhh
Confidence 566 9999999 8864333333 22 12334445555556677778899999998752 12222322220
Q ss_pred c--c--ceEEeecchhhHHHHHHHHHHHcCCCC----CCCeEEEEeeCCeeecccCCCC----cHHHHHhcC
Q 019918 256 K--R--LWQLTPVYVSEWSKWLDEQKRTAGISP----ESPVYLSLRLDGRVRGSGVGYP----PWNAFVAQL 315 (334)
Q Consensus 256 ~--~--~w~A~Pv~~~eW~~wi~eQ~e~Agv~~----~~gVyI~LrlDGRVr~SG~G~P----pW~~lv~eL 315 (334)
. . .-.-.|+..+.-.+ -.+.-++.. .-+-++.+..||+|+.+-.|.. +-+++.+.|
T Consensus 89 ~~~~~~~~~~~~~~~d~~~~----~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 156 (198)
T 1zof_A 89 VEKGGIGQVSFPMVADITKS----ISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMV 156 (198)
T ss_dssp GGGTCCCCCSSCEEECTTSH----HHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHH
T ss_pred hhcccccCceeEEEECCchH----HHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHH
Confidence 0 0 00112333222111 111224421 3467899999999999988853 345555443
No 88
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=56.60 E-value=21 Score=29.44 Aligned_cols=111 Identities=10% Similarity=0.023 Sum_probs=60.8
Q ss_pred CC--ceeehhhh-cccceEEEEe-cC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhc
Q 019918 182 EK--KIISVNNL-RGIARLVICS-GP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRK 256 (334)
Q Consensus 182 ~~--r~v~L~qL-Rg~aRvVIvA-G~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~ 256 (334)
+| +.++|.++ ++..-++... ++ -..+...+..-+.+.+++.+.|+-||-|..|. .+...++...-.
T Consensus 17 ~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~---------~~~~~~~~~~~~ 87 (192)
T 2h01_A 17 DNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDS---------KFTHLAWKKTPL 87 (192)
T ss_dssp TSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSC---------HHHHHHHHTSCG
T ss_pred CCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCC---------HHHHHHHHHhHH
Confidence 67 89999999 8864333322 22 12334445555556777888899999998852 122222222210
Q ss_pred c----ceEEeecchhhHHHHHHHHHHHcCCC---C-CCCeEEEEeeCCeeecccCCC
Q 019918 257 R----LWQLTPVYVSEWSKWLDEQKRTAGIS---P-ESPVYLSLRLDGRVRGSGVGY 305 (334)
Q Consensus 257 ~----~w~A~Pv~~~eW~~wi~eQ~e~Agv~---~-~~gVyI~LrlDGRVr~SG~G~ 305 (334)
. ...-.|+..+.=.+ + .+.-|+. + .-+.++++..||+|+....|.
T Consensus 88 ~~~~~~~~~~~~l~D~~~~-~---~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~ 140 (192)
T 2h01_A 88 SQGGIGNIKHTLISDISKS-I---ARSYDVLFNESVALRAFVLIDKQGVVQHLLVNN 140 (192)
T ss_dssp GGTCCCSCSSEEEECTTSH-H---HHHTTCEETTTEECCEEEEECTTSBEEEEEEGG
T ss_pred hhCCccCCCcCeEECCcHH-H---HHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCC
Confidence 0 01112333222111 1 1122442 1 246789999999999998874
No 89
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=50.84 E-value=1.1e+02 Score=25.58 Aligned_cols=59 Identities=17% Similarity=0.224 Sum_probs=36.1
Q ss_pred cceEE-ecCCceeehhhh-cccceEEEEecCH---hHHH-HHHhhchhhHHHHhhcCcEEEE-EeeC
Q 019918 175 NLKLR-VDEKKIISVNNL-RGIARLVICSGPA---SYIM-ESFKRSEPFTESLLERGVLVVS-FTTD 234 (334)
Q Consensus 175 rL~Vr-l~~~r~v~L~qL-Rg~aRvVIvAG~~---e~V~-~al~~Ae~~r~~L~~rgVLVVP-V~~d 234 (334)
...+. -.+++.++|++| ++.. +||+-=++ ..+. +-+..-+...+++.+.|+-||- +..|
T Consensus 23 df~l~~~~~g~~v~L~d~~~gk~-vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D 88 (173)
T 3mng_A 23 AVEVFEGEPGNKVNLAELFKGKK-GVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN 88 (173)
T ss_dssp CCEEECSSTTCEEEHHHHTTTSE-EEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CeEeeeCCCCCEEEhHHHhCCCc-EEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 34444 345899999995 8753 44433222 2344 2344555667788899999886 5554
No 90
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=49.51 E-value=1e+02 Score=24.85 Aligned_cols=122 Identities=13% Similarity=0.123 Sum_probs=64.3
Q ss_pred hcccceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHH
Q 019918 172 SLSNLKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKE 250 (334)
Q Consensus 172 ~L~rL~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~ 250 (334)
.+-.+.+.--+++.++|.++++..-+|....+ =..+...+...+.+.+++.+. +.||-|..+..... +.+..+...+
T Consensus 12 ~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~-~~d~~~~~~~ 89 (188)
T 2cvb_A 12 PLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKY-PEDAPEKMAA 89 (188)
T ss_dssp BCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTC-GGGSHHHHHH
T ss_pred CCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccc-cccCHHHHHH
Confidence 34444454456899999999995544443333 234444455556666677776 88888877532110 0111223333
Q ss_pred HhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccC
Q 019918 251 FTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGV 303 (334)
Q Consensus 251 ~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~ 303 (334)
+.....-. .|+..+.=.+ -.+.-++. .-+.++++..||+|+.+|.
T Consensus 90 ~~~~~~~~---~~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~g~ 134 (188)
T 2cvb_A 90 FAEEHGIF---FPYLLDETQE----VAKAYRAL-RTPEVFLFDERRLLRYHGR 134 (188)
T ss_dssp HHHHHTCC---SCEEECSSSH----HHHHTTCC-EESEEEEECTTCBEEEEEC
T ss_pred HHHHhCCC---ceEEECCcch----HHHHcCCC-CCCeEEEECCCCcEEEEEe
Confidence 33332222 2222221000 11122442 2478899999999999944
No 91
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=47.51 E-value=94 Score=23.87 Aligned_cols=116 Identities=20% Similarity=0.204 Sum_probs=69.1
Q ss_pred hccc-ceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHh-hcCcEEEEEeeCCCCCCCCccchHHH
Q 019918 172 SLSN-LKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLL-ERGVLVVSFTTDGNIPSFEFEESEEM 248 (334)
Q Consensus 172 ~L~r-L~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~-~rgVLVVPV~~dg~sp~~~f~~~e~~ 248 (334)
.+-. +.+.-.++ .+++.++++..-+|....+ =..+...+..-+.+.+.+. +.++.||-|..|. ..+..
T Consensus 7 ~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~--------~~~~~ 77 (146)
T 1o8x_A 7 YLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDE--------EEDGF 77 (146)
T ss_dssp TSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCC--------SHHHH
T ss_pred hCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCC--------CHHHH
Confidence 3444 45544567 9999999987555444443 2345555555556666776 3688888888753 12233
Q ss_pred HHHhhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEe-eCCeeeccc
Q 019918 249 KEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLR-LDGRVRGSG 302 (334)
Q Consensus 249 ~~~~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~Lr-lDGRVr~SG 302 (334)
.++.. +..|...|+...+...=+. +.-++. .-+.++.+. .||+|..+.
T Consensus 78 ~~~~~--~~~~~~~~~~~~d~~~~~~---~~~~v~-~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 78 AGYFA--KMPWLAVPFAQSEAVQKLS---KHFNVE-SIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HHHHT--TCSSEECCGGGHHHHHHHH---HHTTCC-SSSEEEEEETTTCCEEESC
T ss_pred HHHHH--HCCceeeccchhhHHHHHH---HHhCCC-CCCEEEEEECCCCeEEEec
Confidence 33332 2567777876322222122 223553 357899999 999998764
No 92
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=46.68 E-value=5.9 Score=31.36 Aligned_cols=113 Identities=11% Similarity=0.143 Sum_probs=57.3
Q ss_pred ceEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchh-hHHHHh-hcCcEEEEEeeCCCCC-CCCccchHHHHHH
Q 019918 176 LKLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEP-FTESLL-ERGVLVVSFTTDGNIP-SFEFEESEEMKEF 251 (334)
Q Consensus 176 L~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~-~r~~L~-~rgVLVVPV~~dg~sp-~~~f~~~e~~~~~ 251 (334)
+.+.-.+++.+++.++++..-+|....+ =..+...+..-+. +.+.+. +.++.||-|..+.... ...|.
T Consensus 16 f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~-------- 87 (159)
T 2ls5_A 16 FTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFA-------- 87 (159)
Confidence 3333345789999999886433333322 1223333333333 444555 6788888887753211 11111
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHc---CCC-CCCCeEEEEeeCCeeecccCCCCc
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTA---GIS-PESPVYLSLRLDGRVRGSGVGYPP 307 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~A---gv~-~~~gVyI~LrlDGRVr~SG~G~Pp 307 (334)
.. ..+ -+|+ +.++..+.+ ++. .+-+-++++..||+|+.+..|..+
T Consensus 88 -~~--~~~-~~~~-------~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~ 136 (159)
T 2ls5_A 88 -KS--TGV-TYPL-------GLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRLYNE 136 (159)
Confidence 11 011 1222 222222221 221 124678899999999998888544
No 93
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=38.63 E-value=1.3e+02 Score=22.81 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=65.0
Q ss_pred eEEecCCceeehhhhcccceEEEEecC-HhHHHHHHhhchhhHHHHh-hcCcEEEEEeeCCCCCCCCccchHHHHHHhhh
Q 019918 177 KLRVDEKKIISVNNLRGIARLVICSGP-ASYIMESFKRSEPFTESLL-ERGVLVVSFTTDGNIPSFEFEESEEMKEFTRK 254 (334)
Q Consensus 177 ~Vrl~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~al~~Ae~~r~~L~-~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~ 254 (334)
.+.-.++ .+++.++++..-+|...++ =......+..-+.+.+.+. +.++.||-|..|. +.+...++..
T Consensus 13 ~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~--------~~~~~~~~~~- 82 (144)
T 1o73_A 13 NLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDE--------NESDFHDYYG- 82 (144)
T ss_dssp CBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCS--------SHHHHHHHHT-
T ss_pred EeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCC--------CHHHHHHHHH-
Confidence 3333457 9999999987654444443 2344444555555666666 4688888888753 1222333322
Q ss_pred hccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEe-eCCeeeccc
Q 019918 255 RKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLR-LDGRVRGSG 302 (334)
Q Consensus 255 ~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~Lr-lDGRVr~SG 302 (334)
+..|...|+...+-..-+.+ .-++. .-+.++.+. .||+|..+.
T Consensus 83 -~~~~~~~~~~~~~~~~~~~~---~~~v~-~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 83 -KMPWLALPFDQRSTVSELGK---TFGVE-SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp -TCSSEECCTTCHHHHHHHHH---HHTCC-SSSEEEEEETTTCCEEESC
T ss_pred -hCCceEeeccchhHHHHHHH---HcCCC-CCCEEEEEECCCCeEEecc
Confidence 25677777763222222222 22552 357899999 999998765
No 94
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=32.96 E-value=1.8e+02 Score=24.82 Aligned_cols=79 Identities=14% Similarity=0.126 Sum_probs=49.5
Q ss_pred ccceEEEEecCHhHH----HHHHhhchhhHHHHhhcCcEEEEEeeCCCCCCCCccchHHHHHHhhhhccceEEeecc---
Q 019918 193 GIARLVICSGPASYI----MESFKRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVY--- 265 (334)
Q Consensus 193 g~aRvVIvAG~~e~V----~~al~~Ae~~r~~L~~rgVLVVPV~~dg~sp~~~f~~~e~~~~~~~~~~~~w~A~Pv~--- 265 (334)
+.++++|+.|+...- .-.-+.++.+.+.+.+.|.=|.-+.+..+ ++ -++..+.-...+.-+.++|++
T Consensus 11 ~~~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~~v~~~dL~~~-----~d-~~~~~~~l~~AD~iV~~~P~y~~s 84 (204)
T 2amj_A 11 GSSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSD-----YD-VKAEVQNFLWADVVIWQMPGWWMG 84 (204)
T ss_dssp -CCEEEEEECCC------CHHHHHHHHHHHHHHHHTTCEEEEEESSSC-----CC-HHHHHHHHHHCSEEEEEEECBTTB
T ss_pred CCcCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCCEEEEEeCCcc-----cc-HHHHHHHHHhCCEEEEECCccccC
Confidence 567888888877621 22223456677888888877777777431 11 122233344566789999998
Q ss_pred -hhhHHHHHHHHH
Q 019918 266 -VSEWSKWLDEQK 277 (334)
Q Consensus 266 -~~eW~~wi~eQ~ 277 (334)
+..-+.|||.-.
T Consensus 85 ~pa~LK~~iDrv~ 97 (204)
T 2amj_A 85 APWTVKKYIDDVF 97 (204)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 677899999743
No 95
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=32.55 E-value=1.3e+02 Score=27.07 Aligned_cols=49 Identities=22% Similarity=0.336 Sum_probs=34.4
Q ss_pred eeeh-hhh--cccceEEEEecCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 019918 185 IISV-NNL--RGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTD 234 (334)
Q Consensus 185 ~v~L-~qL--Rg~aRvVIvAG~~---e~V~~al~~Ae~~r~~L~~rgVLVVPV~~d 234 (334)
.++| .++ +|.. +|++-=++ ..+..-+.....+.+++.++||-||-|..|
T Consensus 22 ~v~l~~d~l~~GK~-vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D 76 (249)
T 3a2v_A 22 VIKLPDHYVSQGKW-FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD 76 (249)
T ss_dssp EEEETHHHHTTTCE-EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CEecHHHHhhCCCE-EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 6899 999 8753 34433222 245555666667788899999999999885
No 96
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=25.05 E-value=47 Score=27.32 Aligned_cols=38 Identities=18% Similarity=0.411 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHcCCCC-CCCeEEEEeeCCeeecccCCCC
Q 019918 268 EWSKWLDEQKRTAGISP-ESPVYLSLRLDGRVRGSGVGYP 306 (334)
Q Consensus 268 eW~~wi~eQ~e~Agv~~-~~gVyI~LrlDGRVr~SG~G~P 306 (334)
.|+.|+|+++--. ++. .-.--.++..||.||.+-.|.|
T Consensus 1 SWq~YVd~~L~~~-~~g~~~~~aAIig~dGsvWA~s~gf~ 39 (130)
T 3nul_A 1 SWQSYVDDHLMCD-VEGNHLTAAAILGQDGSVWAQSAKFP 39 (130)
T ss_dssp CHHHHHHHTTSCC-BTTBCCSEEEEEETTSCEEEECTTCC
T ss_pred CHHHHHHhhhccc-ccCCcEeeEEEEeCCCCEEEcCCCcc
Confidence 3999999876421 111 1122334477999999888865
No 97
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=24.83 E-value=99 Score=27.63 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=38.0
Q ss_pred CceeehhhhcccceEEEEecCH---hHHHHHHhhchhhHHHHhhcCcEEEEEeeCC
Q 019918 183 KKIISVNNLRGIARLVICSGPA---SYIMESFKRSEPFTESLLERGVLVVSFTTDG 235 (334)
Q Consensus 183 ~r~v~L~qLRg~aRvVIvAG~~---e~V~~al~~Ae~~r~~L~~rgVLVVPV~~dg 235 (334)
++.++|+++||.. +|+.-=|+ ..+..-+..-+...++|.++|+.|+-|..|.
T Consensus 42 ~~~vsLsd~~GK~-vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds 96 (216)
T 3sbc_A 42 FDEVSLDKYKGKY-VVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDS 96 (216)
T ss_dssp EEEECGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CcEEehHHhCCCe-EEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCc
Confidence 4889999999964 44433333 2455556666777889999999999998864
No 98
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=30.68 E-value=15 Score=27.93 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=59.3
Q ss_pred eEEecCCceeehhh-hccc-ceEEEEecC-HhHHHHHHhhchhhHHHHh--hcCcEEEEEeeCCCCCCCCccchHHHHHH
Q 019918 177 KLRVDEKKIISVNN-LRGI-ARLVICSGP-ASYIMESFKRSEPFTESLL--ERGVLVVSFTTDGNIPSFEFEESEEMKEF 251 (334)
Q Consensus 177 ~Vrl~~~r~v~L~q-LRg~-aRvVIvAG~-~e~V~~al~~Ae~~r~~L~--~rgVLVVPV~~dg~sp~~~f~~~e~~~~~ 251 (334)
.+.-.+|+.+++.+ +++. .-+|....+ =......+..-+.+.+.+. ..++-||-|..|.+. +...++
T Consensus 8 ~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~--------~~~~~~ 79 (143)
T 2lus_A 8 KLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSE--------DDMFQY 79 (143)
Confidence 33334588999999 9886 433333322 1223333333444445553 247777777765321 111222
Q ss_pred hhhhccceEEeecchhhHHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCCCCcHH
Q 019918 252 TRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGYPPWN 309 (334)
Q Consensus 252 ~~~~~~~w~A~Pv~~~eW~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G~PpW~ 309 (334)
...-...|...|+..+ ... +-.+.-++. .-+.++.+..||+|+.+ .|..++.
T Consensus 80 ~~~~~~~~~~~~~~~~-~~~---~~~~~~~v~-~~P~~~lid~~G~i~~~-~~~~~~~ 131 (143)
T 2lus_A 80 MMESHGDWLAIPYRSG-PAS---NVTAKYGIT-GIPALVIVKKDGTLISM-NGRGEVQ 131 (143)
Confidence 2222234554444322 100 001111332 24678999999999988 4555554
No 99
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=23.72 E-value=1.4e+02 Score=25.82 Aligned_cols=52 Identities=10% Similarity=0.170 Sum_probs=39.8
Q ss_pred CCceeehhhhcccceEEEEecCHh---HHHHHHhhchhhHHHHhhcCcEEEEEeeC
Q 019918 182 EKKIISVNNLRGIARLVICSGPAS---YIMESFKRSEPFTESLLERGVLVVSFTTD 234 (334)
Q Consensus 182 ~~r~v~L~qLRg~aRvVIvAG~~e---~V~~al~~Ae~~r~~L~~rgVLVVPV~~d 234 (334)
+| .++|.+++|..-+|++-=++. .+..-+.....+.+++.++||-||-|..|
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D 74 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN 74 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 56 899999999866666654433 45666667777888899999999999875
No 100
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=22.86 E-value=21 Score=31.10 Aligned_cols=12 Identities=50% Similarity=1.055 Sum_probs=10.5
Q ss_pred eeecccCCCCcc
Q 019918 9 YILGPVGSGRGY 20 (334)
Q Consensus 9 ~~~~~~~~~~~~ 20 (334)
.++||+|||.|.
T Consensus 4 il~GpPGsGKgT 15 (206)
T 3sr0_A 4 VFLGPPGAGKGT 15 (206)
T ss_dssp EEECSTTSSHHH
T ss_pred EEECCCCCCHHH
Confidence 578999999994
No 101
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=22.69 E-value=36 Score=27.73 Aligned_cols=33 Identities=24% Similarity=0.511 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEEeeCCeeecccCC
Q 019918 269 WSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVG 304 (334)
Q Consensus 269 W~~wi~eQ~e~Agv~~~~gVyI~LrlDGRVr~SG~G 304 (334)
|++|+++++-..| ..++. -++..||.|+.+-.|
T Consensus 2 Wq~yvd~~L~~~g-~~~~a--AIig~dGsvwA~s~~ 34 (125)
T 1acf_A 2 WQTYVDTNLVGTG-AVTQA--AILGLDGNTWATSAG 34 (125)
T ss_dssp HHHHHHTTTGGGT-SCSEE--EEEETTSCEEEECTT
T ss_pred hHHHHHhhhhhCC-CcceE--EEEcCCCCEEEecCC
Confidence 9999999765444 22233 356779999999666
No 102
>2rrl_A FLIK, flagellar HOOK-length control protein; FLHB, bacterial flagella motor, P transport; NMR {Salmonella typhimurium}
Probab=22.34 E-value=2.2e+02 Score=24.96 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=29.4
Q ss_pred ceEEEEecCHhHHHHHHhh-chhhHHHHhhcCcEEEEEeeC
Q 019918 195 ARLVICSGPASYIMESFKR-SEPFTESLLERGVLVVSFTTD 234 (334)
Q Consensus 195 aRvVIvAG~~e~V~~al~~-Ae~~r~~L~~rgVLVVPV~~d 234 (334)
+.+.+.+ .-+.|.++|+. ...+|+.|.+.|+-+.=+..+
T Consensus 112 ~~v~f~a-~~~~vReaLe~~lp~LRe~La~qGi~L~~v~Vs 151 (169)
T 2rrl_A 112 AQLQMVS-PHSHVRAALEAALPMLRTQLAESGIQLGQSSIS 151 (169)
T ss_dssp EEEEEEC-CSSHHHHHHHHTHHHHHHHHHTTTCEEEEEEEE
T ss_pred EEEEEEc-CCHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEe
Confidence 4555555 45578888886 556799999999999887763
No 103
>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}
Probab=21.69 E-value=77 Score=27.46 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHcCCCCCCCeEEEEe-eCCeeecccCCCC-cHHHHHh
Q 019918 267 SEWSKWLDEQKRTAGISPESPVYLSLR-LDGRVRGSGVGYP-PWNAFVA 313 (334)
Q Consensus 267 ~eW~~wi~eQ~e~Agv~~~~gVyI~Lr-lDGRVr~SG~G~P-pW~~lv~ 313 (334)
++|+.||++++-..| .-.---++. .||-|+.+-.|.+ .|..+..
T Consensus 5 S~Wq~YVd~~L~~~g---~v~~AAI~g~~DG~vWA~s~~~~~~w~~~~~ 50 (166)
T 3nec_A 5 SDWDPVVKEWLVDTG---YCCAGGIANAEDGVVFAAAADDDDGWSKLYK 50 (166)
T ss_dssp CCCHHHHHHHHTTTS---SCSEEEEEETTTCCEEEEEETTSCHHHHHCC
T ss_pred cHHHHHHHHHhhccC---ceeEEEEEecCCCCEEeecCCCCcccccccc
Confidence 569999998774211 123445566 7999999888874 5888854
No 104
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=21.10 E-value=25 Score=31.18 Aligned_cols=13 Identities=46% Similarity=0.933 Sum_probs=11.2
Q ss_pred eeeecccCCCCcc
Q 019918 8 SYILGPVGSGRGY 20 (334)
Q Consensus 8 ~~~~~~~~~~~~~ 20 (334)
-.|+||+|||.|.
T Consensus 32 I~llGpPGsGKgT 44 (217)
T 3umf_A 32 IFVLGGPGSGKGT 44 (217)
T ss_dssp EEEECCTTCCHHH
T ss_pred EEEECCCCCCHHH
Confidence 3689999999985
Done!