BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019921
(334 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224122352|ref|XP_002330602.1| predicted protein [Populus trichocarpa]
gi|222872160|gb|EEF09291.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 235/334 (70%), Positives = 277/334 (82%), Gaps = 1/334 (0%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ MLMVG CHV IPKFE+ A+EA++QHCVTSLITVPA+MADL +L R+K+TWKGR VK
Sbjct: 258 ITMLMVGGCHVLIPKFEASLAIEAIKQHCVTSLITVPAMMADLISLTRLKETWKGRQYVK 317
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
K+LNGGG L +ELMK+AT FP+AKL+SAYGMTET SSLTFMTL+DPTL+TP Q Q
Sbjct: 318 KLLNGGGSLSAELMKDATELFPRAKLLSAYGMTETCSSLTFMTLHDPTLQTPAQTLQTVD 377
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+S HQP GVCVGKP PHVELK+ +D S +GRILTRG H+MLRYWDQ K + ST
Sbjct: 378 KTKSSSAHQPHGVCVGKPPPHVELKISADEPSTIGRILTRGPHLMLRYWDQNPMKATEST 437
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WLDTGDIGSIDD GNVWLVGR+N +IKSGGEN+YPEEVEA+LLQHPG+I VVVG+
Sbjct: 438 NDFWLDTGDIGSIDDCGNVWLVGRQNAQIKSGGENIYPEEVEAMLLQHPGVIATVVVGVP 497
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
ARLTEMVVAC++LR+SWQW+ +NC QS++N L L EVLR +CREK LTGFK P+LF+
Sbjct: 498 EARLTEMVVACIKLRQSWQWTNNNCKQSAENN-LTLCREVLRDYCREKKLTGFKVPKLFI 556
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
LWRKPFPLT+TGKIRRD+VRREVMSHL+ PSNL
Sbjct: 557 LWRKPFPLTTTGKIRRDQVRREVMSHLQFFPSNL 590
>gi|225444051|ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
gi|297740839|emb|CBI31021.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/334 (68%), Positives = 276/334 (82%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIM DL ++IR+K TWK +SVK
Sbjct: 232 LTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIIRMKMTWKVTESVK 291
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGGGL + L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q Q F
Sbjct: 292 KILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFV 351
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+ +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++PS S
Sbjct: 352 EIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSP 411
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WLDTGDIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QHPG+ G VVVG+
Sbjct: 412 DEGWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLP 471
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTGFK P+LF
Sbjct: 472 DVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFT 531
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
LWRKPFPLTSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 532 LWRKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 565
>gi|356533059|ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Glycine max]
Length = 560
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 263/334 (78%), Gaps = 3/334 (0%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M MLMVG CHV +PKF+++SA++A+EQ+ VTS ITVPAIMA L ++IR K+TW+G D+VK
Sbjct: 230 MTMLMVGGCHVLMPKFDAESAVDAIEQYAVTSFITVPAIMASLISIIRHKETWQGGDTVK 289
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGG L EL+K+ + F KAKLISAYGMTET SSLTF+TLY+P ET Q QAFG
Sbjct: 290 KILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYEPMHETTSQSLQAFG 349
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+HQ QGVCVGK APH+ELK+ +D S H+GRILTRG H+MLRYWDQ L P
Sbjct: 350 VAGSKLIHQQQGVCVGKAAPHIELKISADASGHIGRILTRGPHIMLRYWDQTLTNPLNPN 409
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VVVGI
Sbjct: 410 NEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIP 469
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+A LTEMV AC++LRE+WQWSE S+ N+E LLS + L Q+C E +L+ FK P+ F+
Sbjct: 470 DAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNLYQYCLENHLSRFKIPKTFI 526
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
+WRKPF LT+TGKIRRD+VR+EVMS L+SL SNL
Sbjct: 527 VWRKPFQLTTTGKIRRDQVRKEVMSQLQSLHSNL 560
>gi|356555885|ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 1 [Glycine max]
Length = 560
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/334 (64%), Positives = 263/334 (78%), Gaps = 3/334 (0%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M MLMVG CHV +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR K+TWKG ++VK
Sbjct: 230 MTMLMVGGCHVLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRHKETWKGGETVK 289
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGG L EL+K+ + F KAKLISAYGMTET SSLTF+TLYDP ET Q QAFG
Sbjct: 290 KILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQAFG 349
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+HQ QGVC+GK APH+ELK+ +D S H GRILTRG H+MLRYWDQ L P
Sbjct: 350 VAGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNPLNPN 409
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VVVGI
Sbjct: 410 KRAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIP 469
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+A LTEMV AC++LRE+WQWSE S+ N+E LLS + ++Q+C E +L+ FK P++F+
Sbjct: 470 DAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIENHLSRFKIPKMFI 526
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
+WRKPFPLT+ GKI+RD+VR+EVMS L+SL SNL
Sbjct: 527 VWRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL 560
>gi|359483953|ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 2 [Vitis vinifera]
Length = 545
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/342 (63%), Positives = 256/342 (74%), Gaps = 33/342 (9%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI--------RVKKT 52
+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIM DL ++I R+K T
Sbjct: 229 LTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIISSGLESFVRMKMT 288
Query: 53 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 112
WK +SVKKILNGG MTET SSLTFMTLYDPT +
Sbjct: 289 WKVTESVKKILNGG-------------------------MTETCSSLTFMTLYDPTCASS 323
Query: 113 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQF 172
Q Q F + +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ
Sbjct: 324 RQALQEFVEIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQI 383
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
++PS S E WLDTGDIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QHPG+
Sbjct: 384 SSRPSDSPDEGWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVT 443
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
G VVVG+ + RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTG
Sbjct: 444 GSVVVGLPDVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTG 503
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK P+LF LWRKPFPLTSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 504 FKIPKLFTLWRKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 545
>gi|255575310|ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus communis]
gi|223532002|gb|EEF33813.1| AMP dependent CoA ligase, putative [Ricinus communis]
Length = 551
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/347 (60%), Positives = 256/347 (73%), Gaps = 39/347 (11%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL-------------I 47
MAMLMVGACHVFIPKF + A++ ++QH VTSLITVPA M DL +L +
Sbjct: 231 MAMLMVGACHVFIPKFNASLAVDVIDQHNVTSLITVPATMGDLISLTSQLAQFIFQRNFV 290
Query: 48 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 107
R K+TWKGR ++KK+LNGG MTE+ SSLTFMTLYDP
Sbjct: 291 REKETWKGRHTLKKMLNGG-------------------------MTESCSSLTFMTLYDP 325
Query: 108 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 167
TLETP QL Q +G SV+QPQGVCVGKPAPHVE+K+C DGSSH GRILTRG H MLR
Sbjct: 326 TLETPDQLLQTYGRTKLTSVNQPQGVCVGKPAPHVEIKICPDGSSHSGRILTRGPHAMLR 385
Query: 168 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
YWDQ ++ S T E+WLDTGDIG ID GN+WL+GR N RIKSGGENV+PEEVEA+LLQ
Sbjct: 386 YWDQTPSEASDRTNEIWLDTGDIGIIDGSGNLWLIGRANNRIKSGGENVHPEEVEAILLQ 445
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
HPG+ +V+GI +ARL EMVVAC+RLRE W+WS +C + KE+LL SE+L+++CRE
Sbjct: 446 HPGVAAAIVLGIPDARLMEMVVACIRLREGWRWSNDDC-KPLAGKEILLCSEILQKYCRE 504
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
KNL+ FK P++F++WRKPFPLT++GKIRRD++R EV SHL+ LPS+L
Sbjct: 505 KNLSRFKVPKIFIIWRKPFPLTTSGKIRRDQIRGEVTSHLQFLPSSL 551
>gi|449433565|ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 564
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 259/334 (77%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+AMLM+GA H+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R+SVK
Sbjct: 231 IAMLMLGARHILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTRESVK 290
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGGGLP EL+K+A FP+AKL+SAYGMTET SSLTF+ L DP ET Q++
Sbjct: 291 KILNGGGGLPLELIKDAVGIFPRAKLVSAYGMTETCSSLTFLMLCDPMGETSVPHFQSYE 350
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+ SV+QP+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY+D+ A+PS
Sbjct: 351 HSKCRSVYQPEGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRYYDKISARPSNDA 410
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+VW DTGDIGSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQHPG+ VV+GI
Sbjct: 411 NDVWFDTGDIGSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQHPGVKRCVVIGIP 470
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
++RLTE VACV+L E WQW E+N + + LSS +LR+HC + NLTGFK P+ F+
Sbjct: 471 DSRLTEKTVACVQLEEDWQWYETNHELLRGKIKQHLSSAILREHCMKCNLTGFKVPKEFI 530
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
W KPFP+TS GK +RD +R EV+SHL+ L S L
Sbjct: 531 KWGKPFPVTSMGKFKRDAIRNEVISHLRLLRSTL 564
>gi|449511136|ref|XP_004163873.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 572
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/342 (60%), Positives = 261/342 (76%), Gaps = 8/342 (2%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+AMLM+GA H+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R+SVK
Sbjct: 231 IAMLMLGARHILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTRESVK 290
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPTLETP 112
KILNGGGGLP EL+K+A + FP+AKL+SAYG MTET SSLTF+ L DP ET
Sbjct: 291 KILNGGGGLPLELIKDAVSIFPRAKLVSAYGSAFVPHCWMTETCSSLTFLMLCDPMGETS 350
Query: 113 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQF 172
Q++ + SV+QP+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY+D+
Sbjct: 351 VPHFQSYEHSKCRSVYQPEGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRYYDKI 410
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A+PS +VW DTGDIGSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQHPG+
Sbjct: 411 SARPSNDANDVWFDTGDIGSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQHPGVK 470
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VV+GI ++RLTE VACV+L E+WQW E+N + + LSS +LR+HC + NLTG
Sbjct: 471 RCVVIGIPDSRLTEKTVACVQLEENWQWYETNHELLRGKIKQHLSSAILREHCMKCNLTG 530
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK P+ F+ W KPFP+TS GK +RD +R EV+SHL+ L S L
Sbjct: 531 FKVPKEFIKWGKPFPVTSMGKFKRDAIRNEVISHLRLLRSTL 572
>gi|357448509|ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 562
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/343 (60%), Positives = 259/343 (75%), Gaps = 15/343 (4%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MAMLMVG CHVF+PKF+++ A+ +E++ VTSLITVPAIM L +++R K+TWKG ++VK
Sbjct: 226 MAMLMVGGCHVFMPKFDAELAVGDIERYNVTSLITVPAIMTSLISIVRRKETWKGGETVK 285
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPTLETP 112
KILNGGG L EL+K+ F KAKLISAYG MTE SSLTF+TLYDP +T
Sbjct: 286 KILNGGGSLSFELIKDTHIFFHKAKLISAYGRSFLTQCWMTEACSSLTFLTLYDPMQKTI 345
Query: 113 GQLPQAFGNV-TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 171
Q +G + + +HQPQGVCVGK APHVELK+C DG + GRILTRG H+MLRYWDQ
Sbjct: 346 SHPFQTYGEEESKHLIHQPQGVCVGKAAPHVELKICKDGDT--GRILTRGPHLMLRYWDQ 403
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
L S EVW DTGDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+LL+HPGI
Sbjct: 404 TLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGI 463
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+V+VGI +AR TEMV AC++ RE+WQW E S+ N+E LS + L+Q+C E NL+
Sbjct: 464 ARVVIVGIPDARFTEMVAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQYCLENNLS 519
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK P++F+ WRKPFPLT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 520 RFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSEIQSLHSNL 562
>gi|356555887|ref|XP_003546261.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 2 [Glycine max]
Length = 544
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/343 (58%), Positives = 245/343 (71%), Gaps = 37/343 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV---------KK 51
M MLMVG CHV +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR K+
Sbjct: 230 MTMLMVGGCHVLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRYIPVFNIFRHKE 289
Query: 52 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 111
TWKG ++VKKILNGG MTET SSLTF+TLYDP ET
Sbjct: 290 TWKGGETVKKILNGG-------------------------MTETCSSLTFLTLYDPMHET 324
Query: 112 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 171
Q QAFG +HQ QGVC+GK APH+ELK+ +D S H GRILTRG H+MLRYWDQ
Sbjct: 325 TNQSLQAFGVAGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQ 384
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
L P WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI
Sbjct: 385 TLTNPLNPNKRAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGI 444
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+VVVGI +A LTEMV AC++LRE+WQWSE S+ N+E LLS + ++Q+C E +L+
Sbjct: 445 ASVVVVGIPDAHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIENHLS 501
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK P++F++WRKPFPLT+ GKI+RD+VR+EVMS L+SL SNL
Sbjct: 502 RFKIPKMFIVWRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL 544
>gi|147837153|emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
Length = 520
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/292 (67%), Positives = 238/292 (81%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ MLMVG CH+FIPKF++K ALEA++QH VTSLITVPAIMADL ++IR+K TWK +SVK
Sbjct: 229 LTMLMVGGCHIFIPKFDAKLALEAIKQHHVTSLITVPAIMADLVSIIRMKMTWKVTESVK 288
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGGGL + L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q Q F
Sbjct: 289 KILNGGGGLSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFV 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+ +S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++PS S
Sbjct: 349 EIKSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSP 408
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WLDTGDIGSIDD GN+WL+GR N IKSGGENVYPEEVE VL QHPG+ G VVVG+
Sbjct: 409 DEGWLDTGDIGSIDDYGNIWLIGRTNNXIKSGGENVYPEEVETVLSQHPGVTGSVVVGLP 468
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTG
Sbjct: 469 DVRLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTG 520
>gi|6634775|gb|AAF19755.1|AC009917_14 Contains similarity to gi|34845 luciferase YE protein from
Pyrophorus plagiophthalamus, and contains an AMP-binding
PF|00501 domain [Arabidopsis thaliana]
Length = 581
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/341 (58%), Positives = 249/341 (73%), Gaps = 19/341 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MAMLMVGACHV +PKF++K+AL+ +EQ+ +T ITVPA+MADL + R K V+
Sbjct: 253 MAMLMVGACHVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAENRGVR 312
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGG L SEL+KEA N FP A+++SAYGMTE SSLTFMTL+DPT E+
Sbjct: 313 KILNGGGSLSSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES--------F 364
Query: 121 NVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
VT ++QP QG CVGKPAPH+EL V D SS VG+ILTRG H MLRYW +A+ +V
Sbjct: 365 KVTYPLLNQPKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQVAQENV 424
Query: 179 ST-----GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
T E WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEVEAVL++HPGI+
Sbjct: 425 ETSESRSNEAWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVS 484
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VV+G+ + RL EMVVACVRL+E W WS D ++ LSSE L+ HCR +NLTGF
Sbjct: 485 AVVIGVIDTRLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQNLTGF 540
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
K P+ FV W K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 541 KIPKRFVRWEKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 581
>gi|22329863|ref|NP_174340.2| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|75304445|sp|Q8VYJ1.1|MENE_ARATH RecName: Full=2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal; AltName: Full=Acyl-activating
enzyme 14; AltName: Full=O-succinylbenzoyl-CoA ligase;
Flags: Precursor
gi|17979487|gb|AAL50080.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|29893264|gb|AAP03026.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|34365547|gb|AAQ65085.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|332193118|gb|AEE31239.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
Length = 560
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/341 (58%), Positives = 249/341 (73%), Gaps = 19/341 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MAMLMVGACHV +PKF++K+AL+ +EQ+ +T ITVPA+MADL + R K V+
Sbjct: 232 MAMLMVGACHVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAENRGVR 291
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGG L SEL+KEA N FP A+++SAYGMTE SSLTFMTL+DPT E+
Sbjct: 292 KILNGGGSLSSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES--------F 343
Query: 121 NVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
VT ++QP QG CVGKPAPH+EL V D SS VG+ILTRG H MLRYW +A+ +V
Sbjct: 344 KVTYPLLNQPKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQVAQENV 403
Query: 179 ST-----GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
T E WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEVEAVL++HPGI+
Sbjct: 404 ETSESRSNEAWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVS 463
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VV+G+ + RL EMVVACVRL+E W WS D ++ LSSE L+ HCR +NLTGF
Sbjct: 464 AVVIGVIDTRLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQNLTGF 519
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
K P+ FV W K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 520 KIPKRFVRWEKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 560
>gi|297845990|ref|XP_002890876.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
gi|297336718|gb|EFH67135.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
Length = 581
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/341 (57%), Positives = 248/341 (72%), Gaps = 19/341 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MAMLMVGACHV +PKF++K+AL+ +E + +T ITVPA+MADL + R K V+
Sbjct: 253 MAMLMVGACHVLLPKFDAKTALQVMEHNRITCFITVPAMMADLIRVNRTTKNGAENRCVR 312
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGG L ++L++EA FP AK++SAYGMTE SSLTFMTL+DPT E+
Sbjct: 313 KILNGGGSLSTQLLQEAVKIFPCAKILSAYGMTEACSSLTFMTLHDPTQES--------F 364
Query: 121 NVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
VT + V+QP QG CVGKPAPH+EL + D SS VG+ILTRG H ML YW L + +V
Sbjct: 365 KVTYSLVNQPKQGTCVGKPAPHIELMIKLDENSSRVGKILTRGPHTMLGYWGHQLVQENV 424
Query: 179 S-----TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + E WLDTGDIG+ D+ GN+ L+GR NGRIK+GGENVYPEEVEAVL++HPGI+
Sbjct: 425 ASSESRSNEAWLDTGDIGTFDEFGNLCLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVS 484
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VV+G+ +ARL EMVVACVRL E+W WS D ++ + LSSE L+ HCR +NLTGF
Sbjct: 485 AVVIGVIDARLGEMVVACVRLHENWIWS----DVENRKQSFQLSSETLKHHCRTQNLTGF 540
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
K P+ FV W K FPLT+TGK++RDEVRR+VMSH + L S+L
Sbjct: 541 KIPKRFVRWEKQFPLTTTGKVKRDEVRRQVMSHFQILTSSL 581
>gi|326487970|dbj|BAJ89824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/333 (51%), Positives = 227/333 (68%), Gaps = 19/333 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A LM G CHV IPKF++KSA++A+++H VT ITVPAIMADL + R K G SV
Sbjct: 228 LATLMAGGCHVLIPKFDAKSAIKAIQEHKVTCFITVPAIMADLLSYARKDKI-SGCGSVT 286
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL-ETPGQLPQAF 119
KILNGGGGL EL+ A++ F A +ISAYGMTE SSLTFM + +P L ET QL
Sbjct: 287 KILNGGGGLSDELINGASHLFFNAAIISAYGMTEACSSLTFMPINNPELQETKNQLS--- 343
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+Q GVCVGKPAPHVE+++ D SS +G+ILTRG H M+ YW
Sbjct: 344 --------NQSGGVCVGKPAPHVEIRIDRDESNSSSSLMGKILTRGLHTMVGYWGNNTVD 395
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
S S WLDTGD G ID G +WL+GR+ GRIKSGGENVYPEEVE VL QHPG+ V
Sbjct: 396 TSESVRNGWLDTGDTGWIDRTGKLWLMGRQKGRIKSGGENVYPEEVELVLSQHPGVAKAV 455
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V G+ ++RL E +V+CV +++ W+W ++ + + KE +S+ +L++HCR KNL+ FK
Sbjct: 456 VFGVPDSRLGEKIVSCVSIKDGWRWVDATAEHQGEGKE--VSAHILQEHCRIKNLSRFKV 513
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PRL+ W +PFP+T+TGKIRR+E++ EV++ ++
Sbjct: 514 PRLYYHWSRPFPVTTTGKIRREELKAEVLTCMQ 546
>gi|226530235|ref|NP_001143117.1| uncharacterized protein LOC100275595 [Zea mays]
gi|195614616|gb|ACG29138.1| hypothetical protein [Zea mays]
gi|413941827|gb|AFW74476.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 575
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 225/342 (65%), Gaps = 15/342 (4%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--RDS 58
MA+LM G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R +
Sbjct: 241 MAVLMAGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGRTT 300
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V KILNGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L +
Sbjct: 301 VTKILNGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQEP 354
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQF 172
GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW
Sbjct: 355 EPEPETQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWANG 414
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A S WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 415 KADSSECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPGVA 474
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VVVG+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L+
Sbjct: 475 RAVVVGVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKELSR 534
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK PR + WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 535 FKVPRSYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 575
>gi|413941825|gb|AFW74474.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 449
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 225/342 (65%), Gaps = 15/342 (4%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--RDS 58
MA+LM G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R +
Sbjct: 115 MAVLMAGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGRTT 174
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V KILNGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L +
Sbjct: 175 VTKILNGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQEP 228
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQF 172
GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW
Sbjct: 229 EPEPETQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWANG 288
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A S WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 289 KADSSECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPGVA 348
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VVVG+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L+
Sbjct: 349 RAVVVGVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKELSR 408
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK PR + WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 409 FKVPRSYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 449
>gi|357144587|ref|XP_003573345.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Brachypodium distachyon]
Length = 553
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/334 (49%), Positives = 226/334 (67%), Gaps = 21/334 (6%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A+LM G CHV IPKF++KSA +A+++ VT ITVPAIMADL + R K+ G +V
Sbjct: 230 LAILMAGGCHVLIPKFDAKSAFKAIQEQKVTCFITVPAIMADLLSYAR-KENISGCGAVT 288
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL--YDPTLETPGQLPQA 118
KILNGGGGL +EL+ +A+ F A + SAYGMTE SSLTFM + +P ET QL
Sbjct: 289 KILNGGGGLSAELINKASCLFLHAAIFSAYGMTEACSSLTFMAINKSEPQ-ETENQLSSH 347
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKV----CSDGSSHVGRILTRGAHVMLRYWDQFLA 174
G GVCVGKPAPHVE+++ + SS +G+ILTRG H M+ YW
Sbjct: 348 SG-----------GVCVGKPAPHVEIQIGREDINSSSSPMGKILTRGLHTMVGYWANNTV 396
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
S S WLDTGD G ID GN+WL+GR+ GRIKSGGENVYPEE+E VL QHPG+ +
Sbjct: 397 DTSESVRNGWLDTGDTGWIDRTGNLWLMGRQKGRIKSGGENVYPEEIELVLSQHPGVAKV 456
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV+G+ ++RL E +VACV + + W+W ++ + + KE +SS+ L++HCR L+ FK
Sbjct: 457 VVLGVPDSRLGEKLVACVNIMDDWKWVDATDEHQGEGKE--VSSQTLQEHCRINKLSRFK 514
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PRL+ WR+PFP+T+TGKI+R+E++ E+++ L+
Sbjct: 515 VPRLYHQWRRPFPVTTTGKIKREELKTEILASLQ 548
>gi|242080461|ref|XP_002444999.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
gi|241941349|gb|EES14494.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
Length = 557
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 226/339 (66%), Gaps = 19/339 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA+LM G CHV IPKF++KSA +A+++ VTS ITVPAIMADL + R + +V
Sbjct: 233 MAILMAGGCHVLIPKFDAKSAFDAIQEQGVTSFITVPAIMADLLSYARKEMISDCGKTVT 292
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-F 119
KILNGGGGL +L+ A+ FP+A + SAYGMTE SSLTFM L P L+ P P + +
Sbjct: 293 KILNGGGGLSLDLLNGASQLFPRAAIFSAYGMTEACSSLTFMALNVPKLQEPNNQPGSHY 352
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWDQFLAK 175
G GVCVGKPAPHVE+++ D SS G ILTRG H M YW
Sbjct: 353 G-----------GVCVGKPAPHVEIRIGMDDNNTSSSPTGNILTRGFHTMAGYWANNKVD 401
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
S WLDTGD G ID GN+WL+GR+ GRIK+GGENVYPEEVE VL QHPG+ +V
Sbjct: 402 SSDCVRNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGENVYPEEVELVLSQHPGVARVV 461
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVGI ++RL E V+ACV +R+ W+W + + K KE +S ++L HCR K L+ FK
Sbjct: 462 VVGIPDSRLGEKVIACVSIRDGWKWVHARTEHQGKGKE--VSPQILHDHCRMKKLSRFKV 519
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
PR + WR+PFP+T+TGKI+R+E++RE+++ ++ LPSNL
Sbjct: 520 PRSYYQWRQPFPVTTTGKIKREELKREILAAIQ-LPSNL 557
>gi|125560037|gb|EAZ05485.1| hypothetical protein OsI_27701 [Oryza sativa Indica Group]
Length = 559
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 225/340 (66%), Gaps = 20/340 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A+LM G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R +K +V
Sbjct: 234 LAILMAGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARKQKILNHGMTVT 293
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP-GQLPQAF 119
KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P QL +
Sbjct: 294 KILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEPKDQLGSS- 352
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI-----LTRGAHVMLRYWDQFLA 174
+GVCVGKPAPH+E+++ +GS+ LTRG H M YW
Sbjct: 353 ----------SEGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNNSI 402
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
S S WLDTGDIG +D G +WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 403 DTSDSVRNGWLDTGDIGWVDKTGYLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLAKA 462
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+ FK
Sbjct: 463 VVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLSRFK 520
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
PR++ W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 521 VPRIYYQWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 559
>gi|222639859|gb|EEE67991.1| hypothetical protein OsJ_25931 [Oryza sativa Japonica Group]
Length = 1338
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 192/296 (64%), Gaps = 17/296 (5%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A+LM G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R +K +V
Sbjct: 234 LAILMAGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARKQKILNHGMTVT 293
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P G
Sbjct: 294 KILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KDQLG 350
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI-----LTRGAHVMLRYWDQFLAK 175
+ + +GVCVGKPAPH+E+++ +GS+ LTRG H M YW
Sbjct: 351 SSS-------EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNNSID 403
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
S S WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+ V
Sbjct: 404 TSDSVRNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLAKAV 463
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
V+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+
Sbjct: 464 VIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLS 517
>gi|115474651|ref|NP_001060922.1| Os08g0130400 [Oryza sativa Japonica Group]
gi|113622891|dbj|BAF22836.1| Os08g0130400 [Oryza sativa Japonica Group]
Length = 270
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 18/282 (6%)
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+V KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P
Sbjct: 2 TVTKILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KD 58
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI-----LTRGAHVMLRYWDQF 172
G+ + +GVCVGKPAPH+E+++ +GS+ LTRG H M YW
Sbjct: 59 QLGSSS-------EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNN 111
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
S S WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 112 SIDTSDSVRNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLA 171
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+
Sbjct: 172 KAVVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLSR 229
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
FK PR++ W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 230 FKVPRIYYQWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 270
>gi|168018797|ref|XP_001761932.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686987|gb|EDQ73373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 47/357 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A +MVGA HV +PKF + + +A+ H VTS+I VPA++ADL S++
Sbjct: 222 LANVMVGASHVILPKFHAAAVFDAIRNHDVTSMIIVPAMLADLVATSASSIGRHSFTSIR 281
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+LNG GG+P+ L+ FP A+L SAYGMTE SS++F+ + + ++ GQL
Sbjct: 282 TLLNGAGGIPALLLDSTRLLFPNAELFSAYGMTEACSSMSFIPVDEQ--DSTGQL----- 334
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV-----------CSDGSS------HVGRILTRGAH 163
GVCVGK APHVEL++ + SS G++ TRG H
Sbjct: 335 ----------GGVCVGKAAPHVELRIGQPVTEQKSIDSHENSSPESVLFREGQVFTRGPH 384
Query: 164 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE-VE 222
VM YW +V + + WL TGD+G +D+ G +WL+GR IKSGGENVY E VE
Sbjct: 385 VMEYYWGLPSETANVLSADGWLATGDVGWMDEAGRLWLLGRSKDVIKSGGENVYASEVVE 444
Query: 223 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE-----------SNCDQSSKN 271
VL++HPG++ + VVGI + RLTEMVVA VRLR+ W W + SN Q
Sbjct: 445 NVLMKHPGMLSVAVVGIPDERLTEMVVAFVRLRDKWIWEDKYQGKLSVTGASNQIQLEDY 504
Query: 272 KELLLSSEV-LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + S++ LR HC++ L+ +K PRL ++ ++PFP TSTGKI+++ VRR + L
Sbjct: 505 RGNRVVSQIELRIHCQQLGLSRYKVPRLILVNKEPFPTTSTGKIKKNLVRRMALERL 561
>gi|302769520|ref|XP_002968179.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
gi|300163823|gb|EFJ30433.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
Length = 458
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 191/322 (59%), Gaps = 34/322 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDS 58
+AM+M G+ +F+PKFE+ + L+A++ + ++++I VP ++ D+ + R + + S
Sbjct: 163 LAMVMAGSQQLFLPKFETSAVLQALKDYEISTMIVVPTMLRDILEPGIFRKSGSDQVFPS 222
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+ ILNGGG +PS L+ +FP A+L SAYGMTE SS+TF+ L G +P
Sbjct: 223 MLTILNGGGSVPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHVPLG 275
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
G+ CVGKP PHV++ + GRI TRG HVM YW Q + V
Sbjct: 276 VGS------------CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIETAGV 317
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WLDTGDIG ID GN+WL+GR +K+GGENVY EVE VL QHP + + VVG
Sbjct: 318 LQQDGWLDTGDIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVAVVG 377
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +RL+E+V A VRL + W WS S + +S LR HC ++ L+ +K P+L
Sbjct: 378 VPESRLSEIVAAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKIPKL 430
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
V + PFP+TSTGK+R+D ++
Sbjct: 431 IVQRQDPFPVTSTGKVRKDMIK 452
>gi|302788472|ref|XP_002976005.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
gi|300156281|gb|EFJ22910.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
Length = 458
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 190/322 (59%), Gaps = 34/322 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDS 58
+AM+M G+ +F+PKFE+ + +A++ + ++++I VP I+ D+ + R + + S
Sbjct: 163 LAMVMAGSQQLFLPKFETSAVRQALKDYNISTMIVVPTILRDILEPGIFRKSGSDQVFPS 222
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+ ILNGGG +PS L+ +FP A+L SAYGMTE SS+TF+ L G +P
Sbjct: 223 MLTILNGGGSVPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHVPLG 275
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
G+ CVGKP PHV++ + GRI TRG HVM YW Q + V
Sbjct: 276 VGS------------CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIETAGV 317
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WLDTGDIG ID GN+WL+GR +K+GGENVY EVE VL QHP + + VVG
Sbjct: 318 LQQDGWLDTGDIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVAVVG 377
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +RL+E+V A VRL + W WS S + +S LR HC ++ L+ +K P+L
Sbjct: 378 VPESRLSEIVAAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKIPKL 430
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
V + PFP+TSTGK+R+D ++
Sbjct: 431 IVQRQDPFPVTSTGKVRKDMIK 452
>gi|388493538|gb|AFK34835.1| unknown [Medicago truncatula]
Length = 166
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 133/170 (78%), Gaps = 4/170 (2%)
Query: 165 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 224
MLRYWDQ L S EVW DTGDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+
Sbjct: 1 MLRYWDQTLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAI 60
Query: 225 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 284
LL+HPGI +V+VGI +AR TEMV AC++ RE+WQW E S+ N+E LS + L+Q+
Sbjct: 61 LLEHPGIARVVIVGIPDARFTEMVAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQY 116
Query: 285 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 334
C E NL+ FK P++F+ WRKPFPLT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 117 CLENNLSRFKIPKIFIEWRKPFPLTATGKIRRDQVRKEVLSEIQSLHSNL 166
>gi|302847703|ref|XP_002955385.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
gi|300259227|gb|EFJ43456.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
Length = 534
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 171/358 (47%), Gaps = 45/358 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR------------ 48
A LM G VF+P+FE + L + +H V++ I VP ++ DLA
Sbjct: 187 FAALMAGCTQVFLPRFEPRLVLRIIVRHTVSAFIAVPTMLQDLAAAATAAAAEAACGGSS 246
Query: 49 --------VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 100
++ W V++IL G G +L +FP A L+SAYGMTE SS+T
Sbjct: 247 SGSGGTSGLRPPW---GCVRRILVGAGPTSPQLQDAICRTFPGADLLSAYGMTEACSSMT 303
Query: 101 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV-CSDGSSHVGRILT 159
F L + P + VCVG PAP V++++ ++ T
Sbjct: 304 FRHLSSAA-------SVSPSGTPPAAAAATSAVCVGWPAPGVQIRIRIRTEAAAADAGAT 356
Query: 160 RGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 219
RG HVML YW A + + WL TGD+G + G++WL+GR IKSGGENV+
Sbjct: 357 RGPHVMLGYWGNSAATAEAISADGWLSTGDLGYLAQDGSLWLLGRAKDMIKSGGENVFAP 416
Query: 220 EVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE------ 273
EVEA L HP + + VVG+ + RL E V A V LR W + +++ S+ +
Sbjct: 417 EVEAALCSHPAVAAVAVVGLPDERLGEKVAALVVLRNEWSFQDTSTTSSTMSTNRNATTT 476
Query: 274 --------LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ S L+ HCR + L GF+ PR R+P P TS+GK+ + EVR +
Sbjct: 477 TTTTTTSGCITSLADLQAHCRAQGLAGFRLPRFAAAQRQPLPTTSSGKVAKAEVRERL 534
>gi|307107262|gb|EFN55505.1| hypothetical protein CHLNCDRAFT_133905 [Chlorella variabilis]
Length = 767
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 140/282 (49%), Gaps = 19/282 (6%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+AML GA H F+P+F+ + L A+ H TS I VP ++ADL T + +V+
Sbjct: 236 LAMLAAGARHAFLPRFDGAALLGAIRGHHATSFIAVPTMVADLLT-AAAEAGVASLPAVR 294
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP-TLETPGQLPQAF 119
++L GGGGL L P A L +AYGMTE +SSLTF TL+ P
Sbjct: 295 RVLVGGGGLSPALRDGLAALCPAATLHAAYGMTEGASSLTFHTLWSPEAGAGAPGSSGGA 354
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----------------GRILTRGAH 163
P + P GV VG+P P +EL V G ++TRG+H
Sbjct: 355 PAAQPGARGPPGGVFVGRPPPGIELAVYQPPGGGGGGGGSGGGGGIRFAGEGEVVTRGSH 414
Query: 164 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 223
VML YWD A + WL TGD+G + G +WL+GR IKSGGENV+ EVE
Sbjct: 415 VMLGYWDDEDATAAAQLPGGWLRTGDLGCLRQG-QLWLMGRAKDMIKSGGENVHAWEVER 473
Query: 224 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
L HP + VVG A+ RL E V A V LR W+W C
Sbjct: 474 ALASHPAVAAAAVVGAADWRLGEAVAAAVVLRPGWRWRGERC 515
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 18/75 (24%)
Query: 272 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP------------------FPLTSTGK 313
+E ++ L+QHCR L GFK PR+F+L P+ STGK
Sbjct: 675 EEAVVDGRALQQHCRAAGLAGFKLPRVFLLCDAAAAAATPGRASSPSSGGVVLPVNSTGK 734
Query: 314 IRRDEVRREVMSHLK 328
+ + +R++V H++
Sbjct: 735 VVKHLLRQQVQLHMQ 749
>gi|145341146|ref|XP_001415675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575898|gb|ABO93967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 356
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 155/330 (46%), Gaps = 54/330 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV-- 59
A L GA HVF+ KF+ L + VT+ I VPA+M +L +G D+V
Sbjct: 57 ATLAAGANHVFVNKFDPDLVLRIIVDEGVTAFIAVPAMMRELVD-------SRGGDTVFP 109
Query: 60 --KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+KIL G G L EL + FP AK+ AYGMTET+SS+TF++ D E
Sbjct: 110 TVRKILVGAGRLTDELYNSIRHVFPNAKVTMAYGMTETTSSVTFLSPEDARFEL------ 163
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G AP VE+K ++G ++L RG+ +ML Y + +
Sbjct: 164 -----------DADSTFAGNAAPGVEVKTDAEG-----QLLVRGSSLMLGYVG--VDRTE 205
Query: 178 VSTGEVWLDTGDIGSI------DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGD+G++ + G VWL GR IKSGGENV PEEVE +L +H +
Sbjct: 206 TFDADGWFATGDLGAVGEARGEETGSRVWLRGRAKEMIKSGGENVSPEEVERILNKHANV 265
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
VV+G + + E VVA V+LR + +E+ LR C + L
Sbjct: 266 EASVVIGAPHRKWGEAVVAIVKLRATASDTEAE------------HRTALRDWCAKSELA 313
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
FK P+ FV + + + GK+ RD R
Sbjct: 314 RFKIPKCFV-FTEDLRSNAMGKLMRDATYR 342
>gi|407800909|ref|ZP_11147755.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
gi|407057247|gb|EKE43237.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
Length = 517
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 49/314 (15%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGG 67
V +P+F++ A+ A+E H + ++ VP ++A D R + S++ I G
Sbjct: 234 VIVPRFDAAEAMRAIETHRIATVQLVPTMLAMILDHPDFARFDLS-----SLRLITYGAA 288
Query: 68 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 127
+P EL++ A + P + AYGMTETS +T +T D G+L
Sbjct: 289 VMPVELLRRALTALPGVNFVQAYGMTETSPVVTVLT-SDHHAPDSGKLDT---------- 337
Query: 128 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 182
VG P PH +L++ + + G+ILTRG HVM YW+Q A G
Sbjct: 338 -------VGLPMPHADLRIVDEDDRDLPTGATGQILTRGPHVMCGYWNQPEATAKALRGG 390
Query: 183 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 242
W TGD G +D G + + GR I SGGEN+YP E+E LL HPG+ V+G+A+
Sbjct: 391 -WYHTGDAGWLDTDGFLHIAGRTAEMIVSGGENIYPVEIEHALLAHPGVADAAVIGVADP 449
Query: 243 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 302
V A V S ++ + L HCR + G+K PR +W
Sbjct: 450 HWGARVHAVV----------------SPAPGCRVTLDDLAAHCRTV-IAGYKCPRGLTVW 492
Query: 303 RKPFPLTSTGKIRR 316
P PLT+ GK+ +
Sbjct: 493 DGPLPLTNIGKLDK 506
>gi|256392289|ref|YP_003113853.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256358515|gb|ACU72012.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 550
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 157/330 (47%), Gaps = 48/330 (14%)
Query: 7 GACHVFI-PKFESKSALEAV-EQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKIL 63
G+C V P F+ L AV E+HC T L VP + +A+LA L + T+ S++ +
Sbjct: 257 GSCMVLPGPLFDPADTLRAVSEEHC-TVLYGVPTMFIAELALLEKTPDTYD-LSSLRTGV 314
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P E+MK A + AYGMTETS ++ T D +LE
Sbjct: 315 MAGSPCPVEVMKRVIGEMGMADVTIAYGMTETSP-VSTQTRRDDSLER------------ 361
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ VG+ PHVE+K+ G+ G + TRG VML YWD+
Sbjct: 362 -------RVATVGRVHPHVEIKIVDPDTGATLGADEPGELCTRGYSVMLGYWDEPQRTAE 414
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
G+ W+ TGD+ +D G V +VGR + GGENVYP EVE L HP + + V+
Sbjct: 415 AVDGDGWMHTGDLAQMDADGYVAIVGRIKDMVIRGGENVYPREVEEFLYSHPDVEDVQVI 474
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + + E ++A VRLR Q L+ E +R C E L +K PR
Sbjct: 475 GVPDQKYGEELMAWVRLRPGAQ---------------PLTPEAVRTFC-EGRLAHYKIPR 518
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+V FP+T TGK+R+ E+R + M L
Sbjct: 519 -YVHIVDGFPMTVTGKVRKVEMREQAMEIL 547
>gi|385680892|ref|ZP_10054820.1| AMP-binding domain protein [Amycolatopsis sp. ATCC 39116]
Length = 533
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 160/331 (48%), Gaps = 52/331 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P FE K+ L+AVE TSL VP + +A+LA + ++ D S++
Sbjct: 242 GACMVIPAPSFEPKATLQAVEAERCTSLYGVPTMFIAELA-----EPGFEDYDLSSLRTG 296
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 297 IMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSPVST-QTRSDDSIER----------- 344
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E+K+ + G + TRG VML YWDQ
Sbjct: 345 --------RVSTVGRVGPHLEVKIVDPETGLTVPRGEPGELCTRGYSVMLGYWDQPDKTA 396
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+G +DD G + + GR + GGEN+YP E+E L HP ++ V
Sbjct: 397 EVIDKARWMHTGDLGVMDDEGYIQITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQV 456
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + R E ++A +R+RE Q L++E LR+ C K L +K P
Sbjct: 457 IGVPDQRYGEELMAWIRMREGAQ---------------PLTAESLREFCTGK-LAHYKIP 500
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ +V FP+T TGK+R+ E+R + + L
Sbjct: 501 K-YVHIVDEFPMTVTGKVRKVEMREKALKIL 530
>gi|383830174|ref|ZP_09985263.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
gi|383462827|gb|EID54917.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
Length = 560
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 158/332 (47%), Gaps = 52/332 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ K LEAV+ TSL VP + +A+LA + G D S++
Sbjct: 253 GACMVIPAPSFDPKRTLEAVQAERCTSLYGVPTMFIAELA-----DPDFDGYDLASLRTG 307
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 308 IMAGSPCPVEVMKQVIERMGMAEVAICYGMTETSPVST-QTRADDSVER----------- 355
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 --------RVSTVGRVGPHLEVKIVDPETGLTVPRGTPGELCTRGYSVMLGYWNQPEKTA 407
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V
Sbjct: 408 EVIDAARWMHTGDVAVMDDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQV 467
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ +A+ E ++A VR+R+ + +++E LR C + L FK P
Sbjct: 468 IGVPDAKYGEELMAWVRMRDGAE---------------PITAEALRAFCTGR-LAHFKIP 511
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
R +V + FP+T TGKIR+ E+R + + L
Sbjct: 512 R-YVHVVEDFPMTVTGKIRKVEMREKAVELLD 542
>gi|392953725|ref|ZP_10319279.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391859240|gb|EIT69769.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 575
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GAC VF F++ S L+ V+ T+L VP + +A L + DS+
Sbjct: 271 LACVTHGACMVFPADSFDAASVLQTVQDERCTALHGVPTMF--IAELDHPDFSRYTLDSL 328
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M++A ++ AYGMTETS ++F + D LE
Sbjct: 329 RTGIMAGAPCPIEVMRKAIERMHLREITIAYGMTETSP-VSFQSATDDPLER-------- 379
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ +G+ PH+E+K+ +G + + G +L RG VML YW+
Sbjct: 380 -----------RVSTIGRVQPHLEVKIVDEGGNTLPRGQRGELLVRGYSVMLGYWNDAQR 428
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E W+ TGD+G ID+ G ++GR + GGENVYP E+E L +HP I +
Sbjct: 429 TADTIDAEGWMRTGDLGLIDEEGYASILGRAKDMVIRGGENVYPREIEEFLYRHPRIRDV 488
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E + ACV + SE + +R CR + +K
Sbjct: 489 QVVGVPDAKFGEELCACVIAQPGEATSEDD----------------IRAFCR-GEIAHYK 531
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V++ FP+T TGKI++ +R+ + L
Sbjct: 532 IPR-YVVFVDEFPMTVTGKIQKFALRQAMSDRL 563
>gi|308799771|ref|XP_003074666.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
gi|116000837|emb|CAL50517.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
Length = 515
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 158/326 (48%), Gaps = 51/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA HVF+ F+++ AL A+E+ VT+ I VP +MA L + DSV+K
Sbjct: 214 ASMSAGASHVFMRSFDAERALGAIERSGVTAFIAVPTMMAMLVD----AAGERVFDSVRK 269
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
IL G G L + FP AK+ AYGM+ET+SS+TF+ DP G+L
Sbjct: 270 ILVGAGRLLRGQYEAIRRVFPNAKVTMAYGMSETTSSVTFL---DPE---DGRL------ 317
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
V P G+ VE++ ++G HV RG VML Y + K +
Sbjct: 318 -----VEDP--TFAGQAVRDVEVRADANGELHV-----RGPIVMLGY--HGVDKSTTFDA 363
Query: 182 EVWLDTGDIGSID--------DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W TGD+G + G VWL GR IK+GGENV PEEVE V+ H +
Sbjct: 364 DGWFATGDLGRVAPAETSSACTGPRVWLYGRAKAVIKTGGENVSPEEVEGVINAHEDVHT 423
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVVG + + E VVA V+LR Q + + D++ + + CR+ L F
Sbjct: 424 SVVVGAPHEKWGETVVAIVKLR---QGTSLSVDEARPT---------VLEWCRDSRLARF 471
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEV 319
K P+ ++L+ P+ GK R +V
Sbjct: 472 KIPK-YILFTNEIPINMMGKFSRADV 496
>gi|384567576|ref|ZP_10014680.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
gi|384523430|gb|EIF00626.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
Length = 548
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 157/331 (47%), Gaps = 52/331 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ K LEAV+ TSL VP + +A+LA ++ D S++
Sbjct: 253 GACMVIPAPAFDPKKTLEAVQAERCTSLYGVPTMFIAELA-----DPDFEDYDLTSLRTG 307
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ A++ YGMTETS ++ T D +LE
Sbjct: 308 IMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSP-VSTQTRADDSLER----------- 355
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VGK PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 --------RVSTVGKVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTA 407
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V
Sbjct: 408 EVIDAARWMHTGDLAVMDDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQV 467
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E ++A VR+R+ + L++E LR+ C K L +K P
Sbjct: 468 IGVPDPKYGEELMAWVRMRDGAE---------------PLTAESLREFCTGK-LAHYKIP 511
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
R +V FP+T TGKIR+ E+R + L
Sbjct: 512 R-YVHVVDEFPMTVTGKIRKVEMRERAVELL 541
>gi|260904720|ref|ZP_05913042.1| AMP-binding domain protein [Brevibacterium linens BL2]
Length = 564
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 155/329 (47%), Gaps = 46/329 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA + P F+ +AL AV + TSL VP + + L + S+
Sbjct: 264 LAALSHGAAIILPSPGFDPGAALSAVSEEKATSLYGVPTMF--IGELEHPDFSSYDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ YGMTETS ++ MT D TLE Q
Sbjct: 322 RTGVMAGSPCPVEIMKRVISDMNMDEVAICYGMTETSP-VSMMTRVDDTLEARTQ----- 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 376 --------------TVGRVMPHLEIKIADPVTGQAVPRGQKGELCTRGYAVMLGYWENQE 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+G +DD G V + GR + GGENVYP EVE L HP I
Sbjct: 422 KTAETIDASRWIHTGDLGIMDDNGYVDISGRIKDMVIRGGENVYPREVEEFLYHHPSIRD 481
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+A+ + E ++A V L++ + + L ++EV R+ C K L F
Sbjct: 482 VQVVGVADEKYGEELMAWVILKDGF--------------DSLTAAEV-REFCNGK-LAHF 525
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR +V R+ FP+T +GKIR+ E+R E
Sbjct: 526 KIPR-YVEVRESFPMTVSGKIRKIELREE 553
>gi|321466592|gb|EFX77587.1| hypothetical protein DAPPUDRAFT_54086 [Daphnia pulex]
Length = 577
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 149/320 (46%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F ++ A++AVEQ TSL P + D+ L +K S+ G P +
Sbjct: 295 PAFSARKAVKAVEQERCTSLYGTPTMFVDILNLPDLKSY--DLSSLSTGYMAGAPCPQSI 352
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
+K + + AYGMTETS P F + + + + +
Sbjct: 353 VKAVVHDLHMKDFVVAYGMTETS-------------------PVTFSGYSSDPL-EVRHS 392
Query: 134 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
+G P+ + E+KV ++ V G + TRG ML+YW+ + + + WL TG
Sbjct: 393 TIGFPSDYTEVKVVNEDGHIVPINTPGELYTRGYSNMLKYWNDDEKTKEMISVDRWLRTG 452
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
DI ID+ G +VGR + GGEN+YP E+E +L HP + + V+G+ + RL E V
Sbjct: 453 DIAVIDENGYGQIVGRAKDMLIRGGENIYPREIEELLHTHPAVAEVHVIGVPDVRLGEEV 512
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
A +RLR +E + LR CR+K + FK P+ ++L+R FP
Sbjct: 513 CAWIRLRPGCVATEDD----------------LRNFCRDK-VAYFKVPK-YILFRDDFPK 554
Query: 309 TSTGKIRRDEVRREVMSHLK 328
T TGKI++ +R ++ L
Sbjct: 555 TVTGKIQKFRMREITVAELN 574
>gi|399988370|ref|YP_006568720.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
gi|399232932|gb|AFP40425.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
Length = 518
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S +
Sbjct: 220 AGLLQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINR--YDLTSFRA 277
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ +P L++ A FP A+ + YGMTE S T ++
Sbjct: 278 LFYAASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS------------------ 319
Query: 122 VTPNSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAK 175
P+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ K
Sbjct: 320 --PDDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----K 373
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 374 PQETAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVA 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ +A E V A V L+ + L++ +R+H + + + G
Sbjct: 434 ACAVIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAG 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR + + PL+ GK+ + E+R
Sbjct: 477 YKCPR-SIEFVNALPLSGAGKVLKRELR 503
>gi|118468421|ref|YP_888350.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118169708|gb|ABK70604.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 520
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S +
Sbjct: 222 AGLLQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINR--YDLTSFRA 279
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ +P L++ A FP A+ + YGMTE S T ++
Sbjct: 280 LFYAASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS------------------ 321
Query: 122 VTPNSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAK 175
P+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ K
Sbjct: 322 --PDDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----K 375
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 376 PQETAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVA 435
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ +A E V A V L+ + L++ +R+H + + + G
Sbjct: 436 ACAVIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAG 478
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR + + PL+ GK+ + E+R
Sbjct: 479 YKCPR-SIEFVNALPLSGAGKVLKRELR 505
>gi|441211311|ref|ZP_20975027.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
gi|440626558|gb|ELQ88388.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
Length = 518
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 53/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L+ G HVFIP FE + ++A+ QH VT + VP ++ L + + S +
Sbjct: 220 AGLLQGGRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINR--YDLTSFRA 277
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ +P L++ A FP A+ + YGMTE S T ++
Sbjct: 278 LFYAASAIPQALLERAMKVFPNAEFVQGYGMTELSPLATLLS------------------ 319
Query: 122 VTPNSVHQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAK 175
P+ +P+ + G+ AP E+++ DG+ VG + RG +VML YW+ K
Sbjct: 320 --PDDHQKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----K 373
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W+ TGD +DD G +++V R I +GGENVY EVE ++QHP +
Sbjct: 374 PQETAAAIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVA 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ +A E V A V L+ + L++ +R+H + + + G
Sbjct: 434 ACAVIGVPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAG 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR + + PL+ GK+ + E+R
Sbjct: 477 YKCPR-SIEFVNALPLSGAGKVLKRELR 503
>gi|407694368|ref|YP_006819156.1| long-chain-fatty-acid-CoA ligase [Alcanivorax dieselolei B5]
gi|407251706|gb|AFT68813.1| Long-chain-fatty-acid-CoA ligase, putative [Alcanivorax dieselolei
B5]
Length = 560
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 147/312 (47%), Gaps = 45/312 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++ LEAV T+L VP + R+K+ S++ + G P E+
Sbjct: 275 PGFDPEATLEAVASERATALYGVPTMFIAELGHPRIKEF--DLSSLRTGIMAGATCPIEV 332
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ + ++ AYGMTETS ++ T D LE +
Sbjct: 333 MRRVISEMHMEEVQIAYGMTETSP-VSLQTGADDELER-------------------RVS 372
Query: 134 CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ PH+E KV + + +G + TRG VML YW+ A + W+ TG
Sbjct: 373 TVGRTQPHLETKVVDEQGNTVPRGEIGELCTRGYSVMLGYWNNPDATAGAIDDDGWMHTG 432
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E L HP ++ + V+GI + + E +
Sbjct: 433 DLAVMDDAGYVRIVGRSKDMIIRGGENIYPREIEEFLYTHPAVVDVQVIGIPDDKYGEEI 492
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA V+L+ Q +EVLR +C+ + + FK PR F + FP+
Sbjct: 493 VAWVKLKSGEQ----------------ADAEVLRDYCKNR-IAHFKTPRHFK-FVDDFPM 534
Query: 309 TSTGKIRRDEVR 320
T TGKI++ +R
Sbjct: 535 TVTGKIQKFRMR 546
>gi|149377184|ref|ZP_01894932.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149358483|gb|EDM46957.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 562
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 149/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE KS L+AV Q T+L VP + +A L + +++ + G P+E+MK
Sbjct: 280 FEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSTLRTGIMAGSICPAEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 338 KVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTV 377
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +V G + TRG VML+YW+ G W+ TGD
Sbjct: 378 GRTQPHLETKIVDPGNGNVVPRGEIGELCTRGYSVMLKYWNNEEKTSEAIDGAGWMHTGD 437
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGEN+YP+E+E L HP I + V GI + + E ++
Sbjct: 438 LATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELI 497
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L N D ++ + LR+ C+ K + FK PR + + FP+T
Sbjct: 498 AWVKL---------NPDADP------VTGDELREFCKGK-IAHFKIPRNYKFVDE-FPMT 540
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 541 VTGKIQKFKMRE 552
>gi|346421738|gb|AEO27382.1| AMP-dependent synthetase and ligase [Pseudomonas sp. 19-rlim]
Length = 514
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 151/332 (45%), Gaps = 49/332 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G H+ +PKFE + ++ V QH T+ + VP ++ L T + S+K +
Sbjct: 222 LSGGTHIVLPKFEMHTFMQGVSQHRATNTVLVPTMINMLMTHPDFSQ--YDLSSLKTCIY 279
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
GG +P LM+ A P + YGMTET T + D T A GN
Sbjct: 280 GGSPMPEALMRRAIELLPDWQFRQIYGMTETGGFATMLHWEDHT---------ADGNRIK 330
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
++ G+PAP V L++ + V G I R +M D +L P +
Sbjct: 331 SA---------GQPAPGVSLRIVDSTGAPVAANVLGEICIRSTALM----DGYLHSPDST 377
Query: 180 TG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ W+ TGD G +D+ G +++ R I SGGENVY EVE VL HP + V
Sbjct: 378 QAVLHDGWMHTGDAGYLDEQGFLFVADRYKDMIVSGGENVYSVEVERVLYLHPAVQEAAV 437
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V A V LR+ Q +++ L Q CRE ++ G+K P
Sbjct: 438 IGVPHQQWGESVHALVVLRQGAQ----------------ATAQELMQFCRE-HIAGYKVP 480
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
R +P P T GKIR++ +R + +S L
Sbjct: 481 RSIDFQDQPLPTTPVGKIRKNVIRDQYLSRLD 512
>gi|111019998|ref|YP_702970.1| AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110819528|gb|ABG94812.1| probable AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 515
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G V +P FE +AL +E+ + S++ VP ++ L L + + S+ I
Sbjct: 223 IAGGILVTLPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPDREIRDLSSITGIQY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + L++EA +FP+A + YGMTE LT ++ D T +L A
Sbjct: 281 GASPISETLLREAQRTFPRADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA------ 332
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVS 179
G+P HVE++V DG VG I+ RG ++M YW++ + + +
Sbjct: 333 -----------GRPMGHVEVRVVDDGGVELPRGEVGEIIARGGNIMAGYWNR-PEETATA 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL TGD G +D+ G + +V R I SGGENVY EVE L HP ++ V+G+
Sbjct: 381 LRDGWLYTGDGGYMDEDGYLLVVDRLKDMIISGGENVYSTEVENALASHPDVVHCAVIGV 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V A + ++ L+ E +R H + + + G+KAPR
Sbjct: 441 PDDRFGERVHAFLVMKPGTS----------------LTCEDVRAHTK-RLIAGYKAPRSV 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
+ + P++ GKI E+RR+ S L P+N
Sbjct: 484 TIVEQ-MPVSPAGKILERELRRQ-FSDLADRPAN 515
>gi|375101721|ref|ZP_09747984.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374662453|gb|EHR62331.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 507
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 64/335 (19%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----SV 59
+ G V IP F+ + L A+ +H VT L VP T++R+ D +
Sbjct: 223 LTGNTQVTIPAFDPAALLAALPEHGVTDLFLVP-------TMLRIVLDHPDFDPAAFAGL 275
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
++++ +P+EL+ A+ FP +L+ AYGMTE S ++T +
Sbjct: 276 RRLVYAAAPMPAELLDRASELFPHVELVQAYGMTELSPAITLLG---------------- 319
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 174
P+ P G+ APH E++V + DG VG I+TRG H+ML YW
Sbjct: 320 ----PSDHAGPHRYSAGRAAPHSEVRVVAPDGGEVPRGTVGEIVTRGGHLMLGYW----G 371
Query: 175 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
KP + T EV W+ TGD G +D+ G +++V R I +GGENVY EVE VL +HP
Sbjct: 372 KPEL-TAEVVRDGWMHTGDAGYLDEAGYLYVVDRIKDMIITGGENVYSAEVENVLHEHPL 430
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ V+G+ + R E V A V D+ E L H R + L
Sbjct: 431 VATCAVIGLPDDRYGERVHAVV---------VPAGDRHPDPAE-------LDAHVRAR-L 473
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+K PR + + PL+ GK+ + E+R S
Sbjct: 474 ANYKVPRGYDFVDE-LPLSGAGKVLKHELRSRFRS 507
>gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Neptuniibacter caesariensis]
gi|89083438|gb|EAR62656.1| acyl-CoA synthase [Oceanospirillum sp. MED92]
Length = 562
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 148/316 (46%), Gaps = 53/316 (16%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE KS LEAV + T+L VP + +A + S++ + G P E+MK
Sbjct: 279 FEPKSVLEAVAEERATALYGVPTMF--IAEMDHPDFDQYDVSSLRTGIMAGAICPEEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T DP + Q V
Sbjct: 337 AVNSKLHMKEVQIAYGMTETSPVSTQTAADDP--------------------FEKQVTTV 376
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WL 185
G+ PH+E K+ S +V G + TRG VML+YW+ P + G + W+
Sbjct: 377 GRTQPHLETKIVDPASGNVVARGEVGELCTRGYSVMLKYWNN----PEATAGAIDNGGWM 432
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + +
Sbjct: 433 HTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPSISDVQVTGVPDKKYG 492
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E +VA V+L D+ ++ E L+ C+ K +T FK PR F +
Sbjct: 493 EELVAWVKLA-------PGADE--------VTEEELKAFCKGK-ITHFKIPRYF-KFTDD 535
Query: 306 FPLTSTGKIRRDEVRR 321
FP+T TGKI++ ++R
Sbjct: 536 FPMTVTGKIQKFKMRE 551
>gi|449479413|ref|XP_004176398.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Taeniopygia guttata]
Length = 661
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 158/337 (46%), Gaps = 51/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M M + G +F P FE K+ALEAV + + L+ P + D+ + + + D
Sbjct: 366 MVMALHGTSCIFSSPSFEGKAALEAVSREKCSFLLGTPTMFIDMLS----QPDFDSYDLS 421
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G +P E M+ +L+ AYG TE +S +TFM
Sbjct: 422 TLRGGIIAGSPVPPETMRTIITKMHMPELVVAYGTTE-NSPVTFMGF------------- 467
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
PN + VG PH E K+ + G + RG VML YW+
Sbjct: 468 ------PNDNMDQKTETVGYIFPHTEAKIEDPETGQSVPLNAPGELQIRGYCVMLGYWND 521
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
V T E W TGD+ ++++ G ++GR I GGEN+YP E+E L HP +
Sbjct: 522 PAKTSDVITAERWYKTGDLATLNEHGYCRIIGRCKDMIIRGGENIYPSELEQFLHTHPKV 581
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ ++R+ E + AC+RLR SE E ++ C+ K ++
Sbjct: 582 EEVQVVGVKDSRMGEEICACIRLRAGQDCSE----------------EEIKAFCKGK-IS 624
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
FK P L+V++ +PLT +GKI++ ++R ++ HL+
Sbjct: 625 HFKIP-LYVVFVSQYPLTVSGKIQKYKLREQMEKHLQ 660
>gi|452949082|gb|EME54553.1| AMP-binding domain protein [Amycolatopsis decaplanina DSM 44594]
Length = 552
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC V P FE K+ LEAV TSL VP + +A L S+
Sbjct: 247 LAATTHGACMVIPAPAFEPKATLEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSL 304
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK+ + A++ YGMTETS ++ T D ++E
Sbjct: 305 RTGIMAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSP-VSTQTRADDSVER-------- 355
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFL 173
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 356 -----------RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQAD 404
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+
Sbjct: 405 KTAEAIDAARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILD 464
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E ++A +R+RE L++E +R+ C E L +
Sbjct: 465 AQVIGVPDEKYGEELMAWIRMREG---------------AAPLTAEAVREFC-EGKLARY 508
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + FP+T TGK+R+ E+R E +S L
Sbjct: 509 KIPR-YVHVVEEFPMTVTGKVRKVEMRAESISIL 541
>gi|419961754|ref|ZP_14477757.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
gi|414572778|gb|EKT83468.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
Length = 515
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 45/323 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G V +P FE +AL +E+ + S++ VP ++ L L ++ + S+ I
Sbjct: 223 IAGGILVMLPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPEREIRDLSSITAIQY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 281 GASPISETLLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA------ 332
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
G+P HVEL+V D + VG I+ RG ++M YW++ + + +
Sbjct: 333 -----------GRPMGHVELRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEETAAA 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL TGD G +D+ G +++V R I SGGENVY EVE L HP ++ V+G+
Sbjct: 381 LRDGWLYTGDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCAVIGV 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V A + ++ + CD +R H + K + G+K+PR
Sbjct: 441 PDDRFGERVHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKSPRSI 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
+ + P++ GKI + E+RR+
Sbjct: 484 TIVEQ-MPVSPAGKILKRELRRQ 505
>gi|398866041|ref|ZP_10621544.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398241940|gb|EJN27576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 45/329 (13%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
AML+ G HV +P F ++ALE + Q VT + P ++ + K D ++
Sbjct: 219 AMLICGGTHVVLPAFSGEAALELISQEGVTDAMLAPTMIQMMLDARDAKPALNALDLSAI 278
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
K I+ G + L+ A +F A+ YGMTE ++ T + + E
Sbjct: 279 KNIIYGASPISPVLLNRACEAFTTARFFQGYGMTELTTGGTMLDAQYHSAE--------- 329
Query: 120 GNVTPNSVHQPQG--VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 172
HQ G G+ VEL++ D V G I+ RG +VML YW+
Sbjct: 330 --------HQASGKMYSAGRAISCVELRIVDDEDREVPRGTVGEIVVRGPNVMLGYWNNP 381
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A V + W+ TGD +D+ G V++V R I SGGEN+Y EVE L HP +
Sbjct: 382 DATAQV-LKDGWMHTGDGAYMDEEGFVYIVDRLKDMIVSGGENIYSAEVENALASHPAVA 440
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+GI + E V A + L+ + +++ E + HCR + + G
Sbjct: 441 QSAVIGIPCEKWGETVHAVIVLK----------------PQAVVTEEEIVAHCRAR-IAG 483
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+K PR V +R+ PL++ GKI ++E+R+
Sbjct: 484 YKCPR-SVEFRQAMPLSTVGKILKNELRQ 511
>gi|317123519|ref|YP_004097631.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315587607|gb|ADU46904.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 543
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 156/323 (48%), Gaps = 52/323 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 63
GAC V P F+ + L+AV+ TSL VP + +L ++ D SV+ +
Sbjct: 254 GACMVIPAPGFDPTATLKAVQDEQCTSLYGVPTMFIAEWSL----PSFADYDISSVRTGI 309
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P+ LMK+ S + I YGMTETS P + N T
Sbjct: 310 MAGSPCPAPLMKQLIASGIEEMTI-CYGMTETS-------------------PVSTQNRT 349
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 177
++ Q G VG+ PH+E+K+ G+ G LT+G VML YW+Q K +
Sbjct: 350 DDTFEQKTGT-VGRVHPHLEIKIVDPGTGETVRRGQAGEFLTKGYSVMLGYWEQ-PDKTA 407
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + W+ TGD+G + D G V + GR + GGENVYP E+E L HP I+ V+
Sbjct: 408 EAIEDGWMHTGDLGVMHDDGYVEITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVI 467
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ +++ E + A VR+RE + L++E LR+ C + L +K PR
Sbjct: 468 GVPDSKYGEELCAWVRMREGAE---------------PLTAEALREFCTGQ-LAHYKIPR 511
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
+V FP+T TGKIR+ E+R
Sbjct: 512 -YVEVVDEFPMTVTGKIRKVEMR 533
>gi|372269916|ref|ZP_09505964.1| AMP-binding domain protein [Marinobacterium stanieri S30]
Length = 562
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE S L+AV T+L VP + +A L + +++ + G P+E+MK
Sbjct: 280 FEPTSVLKAVHSQKATALYGVPTMF--IAELDHPEFESFDLSTLRTGIMAGSICPTEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N +++ AYGMTETS T N + + V
Sbjct: 338 QVINKMNMSEVQIAYGMTETSPVST--------------------QTGANDSIEKRVSTV 377
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E KV G+ + G + TRG VML+YW+ A W+ TGD
Sbjct: 378 GRTQPHLESKVVDPGTGQIVPRGEIGELCTRGYSVMLKYWNNEHATADAIDEAGWMHTGD 437
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++DD G + +VGR + GGENVYP+E+E L HP + + V G+ + + E ++
Sbjct: 438 LATMDDEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPAVSEVQVTGVPDKKYGEELI 497
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L + +S+E LR+ C+ K +T FK PR F ++ FP+T
Sbjct: 498 AWIKLHGDAE---------------EVSAEDLREFCKGK-ITHFKIPRYFKFVQE-FPMT 540
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ ++R ++ L
Sbjct: 541 VTGKIQKFKMREISIAEL 558
>gi|397587792|gb|EJK54032.1| hypothetical protein THAOC_26417 [Thalassiosira oceanica]
Length = 611
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 154/322 (47%), Gaps = 26/322 (8%)
Query: 12 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 71
F P KS + +L+ VPA++ A + K+ +V+ IL GG +
Sbjct: 299 FQPSSILKSIADDESTRSANTLVVVPAMLH--ALIEYTKQQSPVFPNVRLILVGGQSIAG 356
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
+ FP A+++ Y TE SS+TF L T + G P PN+
Sbjct: 357 NVYINTRRMFPNARIVQTYACTEAGSSITFEDLGFATNGSSGGTP-------PNNNSVSG 409
Query: 132 GVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
CVG P H+++++ S H+ G I TRG H M YW + + + W
Sbjct: 410 TSCVGYPPIHIQVEIFDQKSRHMPLRNGEMGIIGTRGPHTMSGYWSRGENNATFLSEADW 469
Query: 185 LDTGDIGSID-DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
+ T D+G D G ++ GR N I++GGE+V +VEA+L+QH II V + + +
Sbjct: 470 MLTNDLGMKDPQSGKLYFCGRANDVIRTGGESVLANDVEAILMQHDDIIECAVFALPDEQ 529
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A + L+ Q + S + +S +LL + +R+HC +L+GFK PR L+
Sbjct: 530 FGECVCAALVLK---QGTRSEMEDAS---DLL---QRIRKHCSRHHLSGFKRPRKVFLFT 580
Query: 304 KPFPLTSTGKIRRDEVRREVMS 325
P S+GKI + E++R+ ++
Sbjct: 581 PALPRNSSGKILKHEIQRKTLA 602
>gi|375140128|ref|YP_005000777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820749|gb|AEV73562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 543
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 53/337 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P FE+++ LEAV TSL VP + +A+LA + + D S++
Sbjct: 250 GACMVIPAPSFEARATLEAVAAERCTSLYGVPTMFIAELA-----ESGFGDFDLASLRTG 304
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ + ++ YGMTETS T DP
Sbjct: 305 IMAGSPCPVEVMKQVIDRMGITEITICYGMTETSPVATQTRADDPI-------------- 350
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
+ + VG PH+E+K+ + G + TRG VML YW++
Sbjct: 351 ------ERRVSSVGTVHPHLEVKIVDPETGVTVPRGAAGELCTRGYSVMLGYWERPDWTA 404
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
W+ TGD+ +DD G V ++GR + GGEN+YP E+E L HP I+ V
Sbjct: 405 EAIDAARWMHTGDLAVMDDEGYVSIIGRSKDMVIRGGENIYPREIEEFLYTHPHILDAQV 464
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + R E ++A VR++E + LS+E LR C K L +K P
Sbjct: 465 IGVPDPRYGEELMAWVRMKEGTE---------------PLSTEALRAFCTGK-LAHYKIP 508
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
R +V FP+T TGK+R+ E+R ++ LK LP +
Sbjct: 509 R-YVHVVDEFPMTVTGKVRKVEMRDAAITLLK-LPQD 543
>gi|443671029|ref|ZP_21136150.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443416419|emb|CCQ14487.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 515
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 58/328 (17%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKGRDSVK 60
+M+G HV +P FE + L A+ H VT ++ VP ++ D TL + S+
Sbjct: 222 VMLGGTHVMVPFFEPTAVLGAIAAHAVTDVLLVPTMIQLLVDHPTLSEFDTS-----SLS 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++L GG + + +++ P+A+L AYGMTE + + + E G
Sbjct: 277 RVLYGGSPISAGVLERTLARLPQARLTQAYGMTELAPVASLLWPEHHVGERIGS------ 330
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAK 175
G+ APH E+++ DG + VG I RG HVML YW+ K
Sbjct: 331 --------------AGRAAPHSEIRIVGPDGKQLTTGSVGEICVRGGHVMLGYWN----K 372
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + V W+ TGD+G +D G +++V R I +GGENVY EVE L HP ++
Sbjct: 373 PEETAAAVRDGWMHTGDVGYLDADGFLFVVDRLKDMIITGGENVYSAEVECALSLHPAVL 432
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ + E V ACV L E + D+ LR+H R + G
Sbjct: 433 ACAVIGVPDGEWGERVHACVVLAEGFP---PMVDE-------------LREHTRTL-VAG 475
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR + + P++ GKI + E+R
Sbjct: 476 YKTPRT-IEFVTALPMSGAGKILKRELR 502
>gi|373856103|ref|ZP_09598848.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453940|gb|EHP27406.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 547
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 157/331 (47%), Gaps = 46/331 (13%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
VGA V + +F L AV+ T+L VP + +A L + S++ +
Sbjct: 256 VGATMVPVKEFNVTDVLSAVQDEKCTALHGVPTMF--IAELNHPEFEKYELSSLRTGIMA 313
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+E+MK T + +++ YG TE+S +T DP ++ N
Sbjct: 314 GSTCPAEVMKAVTETMGASEITITYGQTESSPGITMTRTNDPF------------DLRVN 361
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
SV G+ P+VE+K+ ++ G + TRG HVM Y+ A
Sbjct: 362 SV--------GRAMPNVEVKIVDPTTNKEVPFGVPGELCTRGYHVMKGYYKNPAATADAI 413
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
E WL TGDI +D+ G + GR I GGEN+YP E+E L HP ++ + VVGI
Sbjct: 414 DEENWLHTGDIAVMDENGYCQITGRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGI 473
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A +RL+E + +SE +R +C+ K ++ FK PR +
Sbjct: 474 PDEKYGEEVTAWIRLKE----------------DTTATSEEIRDYCKGK-ISRFKIPR-Y 515
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
+ + + FP+T++GKI++ ++R + + + L
Sbjct: 516 IEFCEAFPMTASGKIQKFKLREDAIKFVNVL 546
>gi|321477421|gb|EFX88380.1| hypothetical protein DAPPUDRAFT_96055 [Daphnia pulex]
Length = 965
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 47/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GA +F P F ++ A++AV T+L P + D+ L +K+ S+ +
Sbjct: 676 GATCIFPSPVFSAREAVKAVHHERCTALYGTPTMYVDILNLPDLKQY--DLKSLSTGIMA 733
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+ K N YGMTE S + TFMTL P+
Sbjct: 734 GAPCPEEIAKGTVNDLNMKDFAILYGMTECSPT-TFMTL-------------------PS 773
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG P HVE+K+ ++ + G I TRG + ML YW+Q +
Sbjct: 774 DSFDLRCSTVGYPCEHVEVKIVDPQTNEIVPVNTPGEICTRGYNTMLGYWNQPDKTSEII 833
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ + W+ +GD+G +++ G +VGR I GGENVYP E+E +L HP + VVG+
Sbjct: 834 SEDGWIRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGV 893
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ RL E + A +R + ++N D S L++ C EK + FK P+ +
Sbjct: 894 PDERLGEEICAWIRCK-----PQTNSD-----------SLELKRFCSEK-MAYFKVPK-Y 935
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+++ FPLT TGK+++ E+R + L
Sbjct: 936 WMFKDKFPLTVTGKVKKFEIRNISIQEL 963
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 29/291 (9%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GA VF P F ++ A++A+ TSL P + D+ L +K+ S+
Sbjct: 84 LAAASFGATCVFPSPVFSAREAVKAIHHERCTSLYGTPTMFVDILNLPDLKQY--DLKSL 141
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ G P E+ K YGMTE S + TFMTL
Sbjct: 142 STGIMAGAPCPEEIAKGTVKDLNMKDFAILYGMTECSPA-TFMTL--------------- 185
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
PN + +G P H+E+K+ ++ + G I TRG + ML YW+Q
Sbjct: 186 ----PNDSFDLRCSTIGYPGEHIEVKIVDPQTNDIVPVNTPGEICTRGYNTMLGYWNQPD 241
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + + W+ +GD+G +++ G +VGR I GGENVYP E+E +L HP +
Sbjct: 242 KTSEIISEDGWIRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQE 301
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 284
VVG+ + RL E + A +R + + K++ L L QH
Sbjct: 302 AQVVGVPDERLGEEICAWIRCKPQTNLDSLELKRFCLEKQISLLFAQLCQH 352
>gi|432340355|ref|ZP_19589799.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
gi|430774636|gb|ELB90220.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
Length = 515
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 45/323 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G V +P FE +AL +E+ + S++ VP ++ L L ++ + S+ I
Sbjct: 223 IAGGILVMLPSFEPAAALRLIEERRINSMLLVPTMIQML--LRHPEREIRDLSSITAIQY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 281 GASPISETLLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA------ 332
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
G+P HVE++V D + VG I+ RG ++M YW++ + + +
Sbjct: 333 -----------GRPMGHVEVRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEETAAA 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL TGD G +D+ G +++V R I SGGENVY EVE L HP ++ V+G+
Sbjct: 381 LRDGWLYTGDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCAVIGV 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V A + ++ + CD +R H + K + G+K+PR
Sbjct: 441 PDDRFGERVHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKSPRSI 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
+ + P++ GKI + E+RR+
Sbjct: 484 TIVEQ-MPVSPAGKILKRELRRQ 505
>gi|453363960|dbj|GAC80275.1| putative long-chain-fatty-acid--CoA ligase [Gordonia malaquae NBRC
108250]
Length = 505
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 61/326 (18%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILN 64
GA +P+F++ + ++ +E+ T VP + LA + GRD +++ ++
Sbjct: 227 GASVALLPRFDATAVIDEIERRRATVFAGVPTMYVALA-----EADATGRDLSTLRAAVS 281
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
GG +P E++K F ++ YG++ET+S+ TF NV
Sbjct: 282 GGASIPGEVIKAVEAKFTGLVVLEGYGLSETASTTTF-------------------NV-- 320
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLAKPS 177
S + + + +GKP VE+KV D G+ +VG++L RG ++M Y+ +P
Sbjct: 321 -SATERKVLSIGKPVWGVEMKVIDDEGNALSAGTDNVGQLLVRGHNIMKGYY----KRPD 375
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+G DD G ++V R I GG NVYP E+E VL HP ++
Sbjct: 376 ATADALRNGWLHTGDLGYRDDEGYYFVVDRLKDMIVRGGYNVYPREIEEVLYSHPDVVEA 435
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G + RL E VVA V +R+ SE++ +K + L +K
Sbjct: 436 AVIGTPDDRLGEEVVAYVAVRDGADLSEADVITFAKEQ-----------------LAAYK 478
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V++ P +TGKI + E+R
Sbjct: 479 YPR-SVVFVAELPKGATGKILKRELR 503
>gi|389819498|ref|ZP_10209366.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
gi|388463296|gb|EIM05660.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
Length = 563
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 156/339 (46%), Gaps = 57/339 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M+G V +PKF+ ++AL+ + + T P + L + K S++ L
Sbjct: 272 VMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMNHPNIAKY--DLSSIEACL 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP+E+ +E KL+ YG+TETS +T L +G T
Sbjct: 330 SGSAPLPAEV-QEKFEELTGGKLVEGYGLTETSP-VTHSNL-------------VWGERT 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPS 177
S+ G P P + K+ G+ +G I +G VM YW KP
Sbjct: 375 KGSI--------GLPYPDTDCKIFQTGTMDTVPNGEIGEIAVKGPQVMKGYWK----KPE 422
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +H I
Sbjct: 423 ETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAIQEC 482
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV GI + E V A + L+E + +E E L HCRE+ L FK
Sbjct: 483 VVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNTHCREQ-LASFK 525
Query: 295 APRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 332
PR++ +RK P T+ GKI RR V EV K++PS
Sbjct: 526 VPRIYE-FRKELPKTAVGKILRRSLVDEEVAKQSKAVPS 563
>gi|441513325|ref|ZP_20995156.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441451942|dbj|GAC53117.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 551
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 45/325 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPS 71
P F+ ++ L+AV +H TSL VP + +A+LA L + S++ + G P
Sbjct: 263 PAFDPRATLDAVAEHRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPE 322
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
++M++ + +++ YGMTETS T + DP + +
Sbjct: 323 QVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELR 362
Query: 132 GVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ + G+ + G + TRG VM YW+ + W+
Sbjct: 363 VTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWM 422
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 423 HTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYG 482
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A VRLR + D ++++ ++ R K PR +V K
Sbjct: 483 EELMAWVRLR------DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKE 525
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGK+R+ +R E S L+ L
Sbjct: 526 FPMTVTGKVRKVAMREEATSILEDL 550
>gi|451335840|ref|ZP_21906405.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
gi|449421732|gb|EMD27139.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
Length = 552
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 150/328 (45%), Gaps = 46/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE K+ LEAV TSL VP + +A L S++ +
Sbjct: 253 GACMVIPAPAFEPKATLEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK+ + A++ YGMTETS T T D ++E
Sbjct: 311 GSPCPVEVMKQVIDRMGMAEVSICYGMTETSPVST-QTRADDSVER-------------- 355
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G TRG VML YW+Q
Sbjct: 356 -----RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGEFCTRGYSVMLGYWEQADKTAEAI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+
Sbjct: 411 DAARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A VR+RE L++E +R+ C E L +K PR +
Sbjct: 471 PDDKYGEELMAWVRMREG---------------AAPLTAEAVREFC-EGKLARYKIPR-Y 513
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
V + FP+T TGK+R+ E+R +S L
Sbjct: 514 VHVVEEFPMTVTGKVRKVEMRERSISIL 541
>gi|333922026|ref|YP_004495607.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484247|gb|AEF42807.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 556
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 52/325 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P FE ++ L+AV + TSL VP + +A+L + + G D +++ + G P
Sbjct: 274 PSFEPQATLQAVSEERCTSLYGVPTMFIAELN-----EPDFDGYDFSNLRTGVMAGSPCP 328
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+MK+ A++ YGMTETS T N +
Sbjct: 329 VEIMKQVIERMGMAEVSICYGMTETSPVST--------------------QTRKNDSIEH 368
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ VG+ PH+E+K+ + G TRG VML YWDQ W
Sbjct: 369 RVSTVGQVGPHLEIKIVDPATGQTVPRGTPGEFCTRGYSVMLGYWDQPDKTAEAIDAARW 428
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGDI +DD G V + GR + GGENVYP E+E L HP ++ V+G+ + +
Sbjct: 429 MHTGDIAVMDDEGYVSITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDEKY 488
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++A V+LRE + L++E LR+ C K L +K PR +V
Sbjct: 489 GEELMAWVQLREDAE---------------PLTAEALREFCTGK-LAHYKIPR-YVHIVD 531
Query: 305 PFPLTSTGKIRRDEVRREVMSHLKS 329
FP+T TGKIR+ E+ RE+ L S
Sbjct: 532 EFPMTITGKIRKVEM-REIAKQLIS 555
>gi|375102706|ref|ZP_09748969.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374663438|gb|EHR63316.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 548
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 158/331 (47%), Gaps = 52/331 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ LEAV+ TSL VP + +A+LA + ++ D S++
Sbjct: 253 GACMVIPAPAFDPGKTLEAVQAERCTSLYGVPTMFIAELA-----EPDFEDYDLASLRTG 307
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ A++ YGMTETS ++ T D +LE
Sbjct: 308 IMAGSPCPVEVMKQVIERMGMAEVSICYGMTETSP-VSTQTRADDSLER----------- 355
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VGK PH+E+K+ + G + TRG VML YW+Q
Sbjct: 356 --------RVSTVGKVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTA 407
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V
Sbjct: 408 EVIDAARWMHTGDLAVMDADGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQV 467
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ +AR E ++A VR+R+ + +++E LR+ C + L +K P
Sbjct: 468 IGVPDARYGEELMAWVRMRDGAE---------------PVTAESLREFCTGR-LAHYKIP 511
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
R +V FP+T TGKIR+ E+R + + L
Sbjct: 512 R-YVHVVGEFPMTVTGKIRKVEMREKAVELL 541
>gi|120404947|ref|YP_954776.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119957765|gb|ABM14770.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 524
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 153/324 (47%), Gaps = 50/324 (15%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDSVKKILN 64
G HVFIP F+ + L+A+++H V+ L+ VP ++ L + V T +++ ++
Sbjct: 229 GGTHVFIPSFKPEGVLDALQRHRVSDLLLVPTMVQMLVDHPALPVYDT----SALQMVMY 284
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAFGN 121
GG + + L++ A+ P A + AYGMTE S T ++ D P L G
Sbjct: 285 GGSPIAAALLERASKRLPTASFVQAYGMTEVSPIATLLSPRDHDDPVLRRSG-------- 336
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKP 176
G APH E+++ + VG I RG HVM YW +
Sbjct: 337 --------------GVAAPHSEVRIVDEDDVEVPRGDVGEITVRGGHVMAGYWGRPEDTA 382
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ G W+ TGD G +D+ G V++V R I SGGENVY EVE L +HP + V
Sbjct: 383 TALRGG-WMHTGDAGYMDERGYVFVVDRIKDMIVSGGENVYSVEVENALARHPAVAACAV 441
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + R E V A V +E D ++N L E LR+ CR + G+K P
Sbjct: 442 IGVPDERWGERVHAVV-----VPSAEGGAD--ARN----LDPEELREFCRSL-IGGYKVP 489
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVR 320
R V PL++ GK+ + E+R
Sbjct: 490 RT-VEVVAALPLSAAGKVLKRELR 512
>gi|384159161|ref|YP_005541234.1| AMP-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164411|ref|YP_005545790.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|384168205|ref|YP_005549583.1| AMP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328553249|gb|AEB23741.1| AMP-binding domain protein [Bacillus amyloliquefaciens TA208]
gi|328911966|gb|AEB63562.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|341827484|gb|AEK88735.1| AMP-binding domain protein [Bacillus amyloliquefaciens XH7]
Length = 546
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 156/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F S L+ VEQ T+L VP + +A L + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPSVLKTVEQEACTALHGVPTMF--IALLHDSGFSDYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T DP
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDP------------- 355
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 356 -------FERRVETAGRALPHIEVRIVRPGTSEEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A +RL++ Q++ S+E +R C+E N+ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-NIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|389730176|ref|ZP_10189351.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
gi|388440948|gb|EIL97268.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
Length = 561
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 157/336 (46%), Gaps = 48/336 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + GAC V IP F++ + LE V T L VP + +A L + S
Sbjct: 263 LACVTHGACMV-IPGEGFDALATLETVAAEKCTGLHGVPTMF--IAELEHPRFAEFDLSS 319
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ A++ AYGMTETS ++F TL + LE
Sbjct: 320 LRTGIMAGSPCPIEVMRRVVGEMHMAEVTIAYGMTETSP-VSFQTLPEDPLER------- 371
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGS----SHVGRILTRGAHVMLRYWDQFL 173
+ +G+ PHVE+K V +DG G + TRG VML YW
Sbjct: 372 ------------RVDSIGRVHPHVEVKLVDADGRIVPRGEPGELCTRGYSVMLGYWQDEA 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ ++DD G +VGR I GGENVYP E+E L HP ++
Sbjct: 420 RTREAIDAAGWMHTGDLATLDDDGYCRIVGRLKDMIIRGGENVYPREIEEFLYTHPKVLD 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ +A+ E V A VRLRE Q SE+ ++ +CR + L +
Sbjct: 480 VQVFGVPDAKFGEQVCAWVRLREGTQASEAE----------------IQDYCR-RRLAYY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
K P +V + FP+T TGK+++ +R + + L +
Sbjct: 523 KVPH-YVRFVDAFPMTVTGKVQKYLMREAMATELAA 557
>gi|379710061|ref|YP_005265266.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374847560|emb|CCF64630.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 541
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AVE TSL VP + D+ L +++ + +++ + G P E+
Sbjct: 257 PSFQPAATLAAVEAERCTSLYGVPTMFIDM--LAQLEDSAADLSTLRTGIMAGSPCPVEV 314
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + +++ + YGMTETS ++ T D +++ +
Sbjct: 315 MKRVIDRMGMSEVCTCYGMTETSP-VSTQTRRDDSIDR-------------------RTA 354
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 355 TVGRVGPHLEIKIVDPVTGRTVPRGEPGELCTRGYSVMLGYWNDPDRTAEAIDAARWMHT 414
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 415 GDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYGEE 474
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VRLRE L ++ LR C K L FK PR +V FP
Sbjct: 475 LMAWVRLREG---------------AAPLDADALRVFCAGK-LAHFKVPR-YVHVVDEFP 517
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ E+R S L
Sbjct: 518 MTVTGKVRKAEMREMARSLL 537
>gi|354612743|ref|ZP_09030685.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222881|gb|EHB87176.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 551
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 148/320 (46%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AVE TSL VP + +A L S++ + G P+E+
Sbjct: 260 PAFDPAATLAAVEAERCTSLYGVPTMF--IAELALSGFDDYDLTSLRTGIMAGSPCPAEV 317
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + A++ YGMTETS ++ T D TL+ +
Sbjct: 318 MRQIIDRMHMAEVSICYGMTETSP-VSVQTRRDDTLDR-------------------RVS 357
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + H G + TRG VML YWDQ V W+ T
Sbjct: 358 TVGRVGPHLEIKIVDPATGLTVPRGHTGELCTRGYSVMLGYWDQPEQTAEVIDAARWMHT 417
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + R E
Sbjct: 418 GDLAVMDDEGYVAVTGRSKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDERYGEE 477
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V+LR+ L++E LR+ C + L +K PR +V FP
Sbjct: 478 LMAWVQLRDPAP---------------TLTAEALREFCAGR-LAHYKIPR-YVHVVDEFP 520
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ +R + L
Sbjct: 521 MTVTGKVRKVAMRERAVELL 540
>gi|381163253|ref|ZP_09872483.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
gi|379255158|gb|EHY89084.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
Length = 547
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 159/331 (48%), Gaps = 52/331 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ ++ LEAV+ TSL VP + +A+LA ++ D S++
Sbjct: 252 GACMVIPAPAFDPRATLEAVQAERCTSLYGVPTMFIAELAV-----PGFEDYDLGSLRTG 306
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ +++ YGMTETS T T D ++E
Sbjct: 307 IMAGSPCPVEVMKQVIERMGMSEVSICYGMTETSPVST-QTRKDDSIER----------- 354
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 355 --------RVSTVGRVGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTA 406
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +DD G + + GR + GGENVYP E+E L HP I+ V
Sbjct: 407 EVIDAARWMHTGDLAVMDDDGYLGITGRLKDLVIRGGENVYPREIEEFLYSHPDILDAQV 466
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ +A+ E ++A VR+R+ + +++E LR+ C + L +K P
Sbjct: 467 IGVPDAKYGEELMAWVRMRDGAE---------------PVTAESLREFCTGR-LAHYKIP 510
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
R +V FP+T TGKIR+ E+R + + L
Sbjct: 511 R-YVHVVDEFPMTVTGKIRKVEMREKAVELL 540
>gi|451346780|ref|YP_007445411.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
gi|449850538|gb|AGF27530.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
Length = 546
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A VRL+E Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKEG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|403508875|ref|YP_006640513.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799440|gb|AFR06850.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 542
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 46/329 (13%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE +AL+AV+ TSL VPA+ +A L +++ +
Sbjct: 253 GACMVIPGPGFEPATALDAVQAEKCTSLYGVPAMF--IAELALPDFDDYDLSTLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+M++ + A++ YGMTETS ++ T D +LE
Sbjct: 311 GSPCPVEVMRQVIDRMGMAEVSICYGMTETSP-VSTQTRRDDSLER-------------- 355
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YW++ V
Sbjct: 356 -----RVSTVGRVGPHLEVKVIDPATGVTVPRGTPGELCTRGYSVMLGYWNEPDKTAEVI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D+ G V + GR + GGEN+YP E+E VL HP ++ V+G+
Sbjct: 411 DRGRWMHTGDLAVMDEDGYVGITGRIKDMVIRGGENIYPREIEEVLYTHPDLLDAQVIGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A VR+RE + L+ E LR C+ + + FK PR +
Sbjct: 471 PDQKYGEELMAWVRMREGAE---------------PLTPETLRAFCQGR-IAHFKIPR-Y 513
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
V FP+T TGK+R+ ++R E + L
Sbjct: 514 VHVVDEFPMTVTGKVRKVQMREESLRLLD 542
>gi|398781291|ref|ZP_10545417.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
gi|396997535|gb|EJJ08491.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
Length = 546
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 155/333 (46%), Gaps = 48/333 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F++ + L+ V+ TSL VP + +A L S++ +
Sbjct: 253 GACIVIPAPAFDAATTLQTVQDERCTSLYGVPTMF--IAELNHPDFGSYDLSSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D L
Sbjct: 311 GSPCPEEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDL---------------- 353
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSV 178
H+ + VG+ PH+E+KV +D +S V G + TRG VML YW++ V
Sbjct: 354 -AHRTE--TVGRVLPHIEVKV-ADPASGVTVPRGTPGELCTRGYSVMLGYWEEPERTAEV 409
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ ++D G V +VGR I GGENVYP E+E L HP I + VVG
Sbjct: 410 IDAARWMHTGDLAVMNDDGYVRIVGRIKDMIIRGGENVYPREIEEFLYSHPKIADVQVVG 469
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E + ACV LR + E L+ + L + CR + L +K PR
Sbjct: 470 VPDEKYGEEIAACVILR---------------DPEDPLTRDELARFCRSR-LAHYKVPRH 513
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
+ FP+T +GK+R+ E+R + L +P
Sbjct: 514 LDIV-DAFPMTVSGKVRKVELRERLARDLGRVP 545
>gi|333990040|ref|YP_004522654.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486008|gb|AEF35400.1| fatty-acid-CoA ligase FadD35 [Mycobacterium sp. JDM601]
Length = 511
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV++ TSL VP + +A L S++ + G P+++
Sbjct: 228 PGFDPAATLRAVQEEACTSLYGVPTMF--IAELGLPDFADYDLTSLRTGIMAGSPCPAQV 285
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ + ++ YGMTETS P + + +S+ Q +
Sbjct: 286 MRRVIDDMHMTEIAICYGMTETS-------------------PVSTQTRSGDSLTQ-RVE 325
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + H VG + TRG VM YW+ + E W+ +
Sbjct: 326 TVGRVGPHLEIKMIDPATGHPVPRGQVGELCTRGYSVMTGYWNDPAKSEAAIDAEGWMHS 385
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + E
Sbjct: 386 GDLAVMDDDGYVRITGRIKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDEIYGEE 445
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V LR+ L+ E LR+ C + L FK PR + + FP
Sbjct: 446 LMAVVMLRDGAG---------------PLTVERLREFCAGR-LAHFKVPRYLRVVAE-FP 488
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T+TGK+R+DEVRR+V+ L
Sbjct: 489 MTATGKVRKDEVRRQVIEQL 508
>gi|418461131|ref|ZP_13032210.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
gi|359738785|gb|EHK87666.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
Length = 547
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 159/331 (48%), Gaps = 52/331 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ ++ LEAV+ TSL VP + +A+LA ++ D S++
Sbjct: 252 GACMVIPAPAFDPRATLEAVQAERCTSLYGVPTMFIAELAV-----PGFEDYDLGSLRTG 306
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ +++ YGMTETS T T D ++E
Sbjct: 307 IMAGSPCPVEVMKQVIERMGMSEVSICYGMTETSPVST-QTRKDDSIER----------- 354
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 355 --------RVSTVGRVGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTA 406
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +DD G + + GR + GGENVYP E+E L HP I+ V
Sbjct: 407 EVIDAARWMHTGDLAVMDDDGYLSITGRIKDLVIRGGENVYPREIEEFLYSHPDILDAQV 466
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ +A+ E ++A VR+R+ + +++E LR+ C + L +K P
Sbjct: 467 IGVPDAKYGEELMAWVRMRDGAE---------------PVTAESLREFCTGR-LAHYKIP 510
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
R +V FP+T TGKIR+ E+R + + L
Sbjct: 511 R-YVHVVDEFPMTVTGKIRKVEMREKAVELL 540
>gi|302538259|ref|ZP_07290601.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
gi|302447154|gb|EFL18970.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
Length = 545
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 153/326 (46%), Gaps = 51/326 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F+ + L AVE TSL VP + +A+LA + G D S++ + G P
Sbjct: 262 PAFDPAATLAAVEAEACTSLYGVPTMFIAELAA-----PGFDGYDLSSLRTGIMAGSPCP 316
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+M E A++ YGMTETS T T D ++E
Sbjct: 317 VEVMNEVIERMGMAEVSICYGMTETSPVST-QTRVDDSVER------------------- 356
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ VG+ PH+E+KV + G + TRG VML YW + GE W
Sbjct: 357 RVSTVGRVGPHLEVKVVDPETGATVPRGTPGELCTRGYSVMLGYWGEPQKTAEAVDGEGW 416
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGD+ +D G + + GR + GGEN+YP E+E L HP ++ + V+G+ +A+
Sbjct: 417 MHTGDLAVMDADGYLAITGRIKDMVIRGGENLYPREIEEFLHGHPDVLDVQVIGVPDAKY 476
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++A VR+RE + L++E +R +C + L FK PR +V
Sbjct: 477 GEELMAWVRMREGAE---------------PLTAETVRAYCSGR-LAHFKIPR-YVHVVD 519
Query: 305 PFPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGKIR+ E+R L+S+
Sbjct: 520 EFPMTVTGKIRKVEMREAAARLLESM 545
>gi|392957198|ref|ZP_10322722.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
gi|391876605|gb|EIT85201.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
Length = 539
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 160/341 (46%), Gaps = 49/341 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + GA V I +F + L+ VE+ T+L VP + +A L + + S++
Sbjct: 239 LTAMTAGATMVPIVQFNPRDVLQTVEKEKCTALHGVPTMF--IAELNDEQFSQFDLSSLR 296
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ N+ +++ AYG TETS T DP
Sbjct: 297 TGVMAGSTCPIEVMKKVINAMGMSEITIAYGQTETSPVFTQTRPEDPI------------ 344
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
+ + VGK P VE+KV ++ G + TRG HVM Y+ A
Sbjct: 345 --------EKRVKTVGKKHPGVEIKVVDPVTNEEVAIGQPGELCTRGYHVMKGYYKMPDA 396
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL TGD+ +D+ G V + GR I GGEN+YP EVE L HP I+ +
Sbjct: 397 TMAAIDQEGWLHTGDLAVMDEDGYVTITGRLKDMIIRGGENIYPREVEEFLYSHPAILDV 456
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ + + E V A +RL+E Q +S+E + +C + FK
Sbjct: 457 QVIGVPDEKYGEKVAASIRLKEGKQ----------------VSAEEIITYCT-GQIAKFK 499
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHLKSLPS 332
P ++ + K +P+T++GKI++ ++R R+++S K + S
Sbjct: 500 IPE-YIFFVKEYPMTASGKIQKYKLREEARQLISRTKGIMS 539
>gi|453382972|dbj|GAC82634.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 551
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 154/325 (47%), Gaps = 45/325 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPS 71
P F+ ++AL+AVE++ TSL VP + +A+LA L ++ S++ + G P
Sbjct: 263 PAFDPRAALDAVEKYRCTSLYGVPTMFIAELALLDSAPDGYRPDLSSLRTGIMAGSPCPE 322
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
+M++ + +++ YGMTETS T + DP G
Sbjct: 323 HVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPLELRVG------------------ 364
Query: 132 GVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ G + G + TRG VM YW+ + W+
Sbjct: 365 --TVGRVGPHLEIKIIDPTTGETLGRNETGELCTRGYSVMKGYWNDPEKTAEAIDADGWM 422
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 423 HTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYG 482
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A VRLR+ + D L++E +R E + K PR +V K
Sbjct: 483 EELMAWVRLRD-------HADD--------LTAEDVRAFA-EGKIARHKIPR-YVHVVKE 525
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGK+R+ +R E + ++ L
Sbjct: 526 FPMTVTGKVRKVAMREEAIHLIEEL 550
>gi|411007068|ref|ZP_11383397.1| AMP-binding domain protein [Streptomyces globisporus C-1027]
Length = 535
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 149/323 (46%), Gaps = 50/323 (15%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV+Q TSL VP + +A L S++ +
Sbjct: 249 GACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER-------------- 351
Query: 126 SVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -----RTGTVGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAE 404
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VV
Sbjct: 405 VIDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVV 464
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R E ++ACV R+ + E L +HCRE+ L +K PR
Sbjct: 465 GVPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHYKIPR 508
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
+ + FP+T +GK+R+ E+R
Sbjct: 509 RLRIL-ETFPMTVSGKVRKIELR 530
>gi|404259900|ref|ZP_10963203.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401568|dbj|GAC01613.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 551
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 45/325 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPS 71
P F+ K+ L+AV +H TSL VP + +A+LA L + + S++ + G P
Sbjct: 263 PAFDPKATLDAVAEHRCTSLYGVPTMFIAELALLDAAPEGYAPDLSSLRTGIMAGSPCPE 322
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
++M++ + +++ YGMTETS T + DP +
Sbjct: 323 QVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------DLR 362
Query: 132 GVCVGKPAPHVELKVCSDG------SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ + G + G + TRG VM YW+ E W+
Sbjct: 363 VTTVGQVGPHLEIKIVAPGMGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDSEGWM 422
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 423 HTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYG 482
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A +RLR + D ++++ ++ R K PR +V K
Sbjct: 483 EELMAWIRLR------DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKE 525
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGK+R+ +R E L+ L
Sbjct: 526 FPMTVTGKVRKVAMREEATHILEDL 550
>gi|154686271|ref|YP_001421432.1| AMP-binding protein [Bacillus amyloliquefaciens FZB42]
gi|42491132|emb|CAE11269.1| YngI protein [Bacillus amyloliquefaciens FZB42]
gi|154352122|gb|ABS74201.1| YngI [Bacillus amyloliquefaciens FZB42]
Length = 546
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A VRL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|441160730|ref|ZP_20967802.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616867|gb|ELQ79989.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 584
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 142/317 (44%), Gaps = 46/317 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F++ + L AVEQ TSL VP + +A L S++ +
Sbjct: 269 GACIVIPAPAFDAAATLRAVEQERCTSLYGVPTMF--IAELDHPDFATFDLSSLRTGIMA 326
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+M+ + A++ YGMTETS T D G
Sbjct: 327 GSPCPEEVMRRVVSEMHMAEVSICYGMTETSPVSTQTRRDDDLAHRTGT----------- 375
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 376 ---------VGRVLPHIEVKVVDPATGATVPRGEPGELCTRGYSVMLGYWEEPERTDEAI 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
E W+ TGD+ ++D G + +VGR I GGENVYP E+E L HP I + VVG+
Sbjct: 427 DAERWMHTGDLAVMNDDGYLRIVGRIKDMIIRGGENVYPREIEEFLYTHPKIADVQVVGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+A+ E + ACV LR+ L+ + L + CR + L +K PR +
Sbjct: 487 PDAKYGEEIAACVILRDPAAG---------------LTRDELARFCRSR-LAHYKVPR-Y 529
Query: 300 VLWRKPFPLTSTGKIRR 316
V FP+T +GK+R+
Sbjct: 530 VHVLDAFPMTVSGKVRK 546
>gi|308173824|ref|YP_003920529.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|307606688|emb|CBI43059.1| short-chain acyl-CoA synthetase [Bacillus amyloliquefaciens DSM 7]
Length = 449
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F S L+ VEQ T+L VP + +A L + V+
Sbjct: 154 LACVSAGAAMIPIEQFSPPSVLKTVEQEACTALHGVPTMF--IALLHDSGFSDYDLSHVR 211
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T DP
Sbjct: 212 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDP------------- 258
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + G+ PH+E+ + G+S G + TRG HVM Y+ A
Sbjct: 259 -------FERRVETAGRALPHIEVGIVRPGTSEEAARGEQGELCTRGYHVMKGYYKNQEA 311
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 312 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 371
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A +RL++ Q++ S+E +R C+E N+ +K
Sbjct: 372 QVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-NIARYK 414
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 415 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 447
>gi|419954341|ref|ZP_14470480.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
gi|387968892|gb|EIK53178.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
Length = 560
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE +AL+AV + T L VP + +A L ++ S++ + G P E+MK
Sbjct: 278 FEPLAALQAVAEERATGLYGVPTMF--IAMLDHPERRSLDLGSLRTGIMAGATCPIEVMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T T D LE VT V
Sbjct: 336 RVIDEMHMNEVQIAYGMTETSPVST-QTRADDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + + +G + TRG VML YW+ A G W+ TGD+
Sbjct: 376 GRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V +VGR I GGENVYP EVE L HP + + V+G+ +++ E +VA
Sbjct: 436 AVMDDEGYVKIVGRNKDMIIRGGENVYPREVEEFLFTHPAVADVQVIGVPDSKFGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+L Q + +E LR+ C+ + + FK PR + + FP+T
Sbjct: 496 WVKLHPGHQ----------------VEAEALREFCKGR-IAHFKTPR-HIRFVDDFPMTI 537
Query: 311 TGKIRRDEVR 320
+GK+++ +R
Sbjct: 538 SGKVQKFRMR 547
>gi|421731485|ref|ZP_16170608.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073698|gb|EKE46688.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 546
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSGEADRGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A VRL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|384265593|ref|YP_005421300.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898579|ref|YP_006328875.1| AMP-binding protein [Bacillus amyloliquefaciens Y2]
gi|380498946|emb|CCG49984.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172689|gb|AFJ62150.1| AMP-binding domain protein [Bacillus amyloliquefaciens Y2]
Length = 546
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 160/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VE+ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEKEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEAAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A +RL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRAFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R++ + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLRKKTIEELK 544
>gi|134097188|ref|YP_001102849.1| AMP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005355|ref|ZP_06563328.1| AMP-binding domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909811|emb|CAL99923.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 538
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 146/313 (46%), Gaps = 45/313 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++AL AV + TSL VP + +A L + S++ + G P E+MK
Sbjct: 256 FDPRTALAAVAEERCTSLYGVPTMF--IAELDHPEFADFDLSSLRTGIMAGSPCPVEVMK 313
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + A++ YGMTETS T T D +LE + V
Sbjct: 314 QVIDRMGMAEVAICYGMTETSPVST-QTRADDSLER-------------------RVSTV 353
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + G + TRG VML YW+Q V W+ TGD
Sbjct: 354 GRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEQADKTAEVIDAARWMHTGD 413
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D V + GR + GGEN+YP E+E L HP I+ VVG+ +AR E ++
Sbjct: 414 LAVMDADDYVGITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVPDARYGEELM 473
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A VRLRE L+ E LR+ C K L +K PR +V + FP+T
Sbjct: 474 AWVRLREG---------------AAELTVEALREFCTGK-LAHYKIPR-YVHVVEEFPMT 516
Query: 310 STGKIRRDEVRRE 322
TGK+R+ E+R E
Sbjct: 517 VTGKVRKVEMREE 529
>gi|326931026|ref|XP_003211637.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Meleagris gallopavo]
Length = 604
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 34/321 (10%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 67
+C P FE K+ LEAV Q + L P + D+ L + +++ + G
Sbjct: 317 SCIFSAPSFEGKATLEAVSQEKCSFLHGTPTMFIDM--LSQPDFDSYNLSTLRGGIIAGS 374
Query: 68 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 127
+P E+MK + +++ AYG TE +S +TFM PT ++ + + G++ P++
Sbjct: 375 PVPPEIMKVISTKMHMPEILVAYGTTE-NSPVTFMGF--PT-DSFTRRTETVGSILPHTE 430
Query: 128 HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+ + GKP P + G + RG VML YW+ V + + W T
Sbjct: 431 AKIEDPETGKPVP----------LNTPGELQVRGYCVMLGYWNDSARTREVISDDNWYKT 480
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI ++D+ G ++GR I GGEN+YP E+E L HP + + VVG+ ++ + E
Sbjct: 481 GDIATLDEDGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQVVGVKDSLMGEE 540
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
V AC+RLR + +C +++ ++ C+ K ++ FK PR ++++ +P
Sbjct: 541 VCACIRLR-----AGQSC-----------AADDIKAFCKGK-ISHFKIPR-YIVFVSQYP 582
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
LT +GKI++ ++R ++ HL+
Sbjct: 583 LTVSGKIQKYKLREQMEKHLQ 603
>gi|94311461|ref|YP_584671.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93355313|gb|ABF09402.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 516
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 156/338 (46%), Gaps = 62/338 (18%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR----- 56
A+ +VG HV I F+ +E + Q VT+++ P T+I++ W R
Sbjct: 219 AVFLVGGTHVAISAFDPGRMMEGIAQDRVTAVLLAP-------TMIQMGLDWMDRHPGRA 271
Query: 57 -----DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM--TLYDPTL 109
S+ + G + L++ +FP + YGMTE + T + +D
Sbjct: 272 AELDLSSLNSLRYGASPMTPALLERTRQTFPAVRFSQGYGMTELAPVATMLGPEYHDAAA 331
Query: 110 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 164
+ G++ VG+PA VE+KV + V G I+ RG +V
Sbjct: 332 QASGKM-----------------YSVGRPAHTVEVKVVDSRGNEVPRGTVGEIIVRGPNV 374
Query: 165 MLRYWDQFLAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 223
ML YW+Q A ++ G W+ TGD G +D G ++LV R I SGGENVY EVE
Sbjct: 375 MLGYWNQPQATAEAIRNG--WMHTGDGGYMDKDGFLFLVDRLKDMIISGGENVYSAEVEK 432
Query: 224 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 283
L HP + V+G+ + + E V A V LR+ ES +S ++
Sbjct: 433 ALASHPAVAQSSVIGVPHEKWGESVHAVVVLRQ----GESATLES------------IQS 476
Query: 284 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
HCRE+ + G+K PR V + PL+S GK+ ++E+R+
Sbjct: 477 HCRER-IAGYKIPR-SVEFVDALPLSSVGKVLKNELRK 512
>gi|421501703|ref|ZP_15948660.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
gi|400347446|gb|EJO95799.1| AMP-binding domain protein [Pseudomonas mendocina DLHK]
Length = 563
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 45/319 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P FE S L+AV + T L VP + +A L ++ S++ + G P E+
Sbjct: 276 PAFEPLSTLQAVAEERATVLYGVPTMF--IAELDHPRRAEFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK A++ AYGMTETS T DP + +
Sbjct: 334 MKRVIEQMHMAEVQIAYGMTETSPVSTQSAADDPL--------------------ELRVA 373
Query: 134 CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ PH+E K+ + + +G + TRG VML YW+ A W+ +G
Sbjct: 374 SVGRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQESIDEAKWMHSG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +D+ G + +VGR I GGEN+YP E+E L HP + + V+GI +++ E V
Sbjct: 434 DLAVMDEAGYLKIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVIGIPDSKYGEEV 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
A V+L + + +L++E L ++C+ + + FK PR F + FP+
Sbjct: 494 AAWVKL----------------HPDQVLTAEALAEYCKGR-IAHFKVPRHFRFVEE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHL 327
T TGK+++ +R + + L
Sbjct: 536 TVTGKVQKFRMRELMQAEL 554
>gi|404401576|ref|ZP_10993160.1| AMP-binding domain protein [Pseudomonas fuscovaginae UPB0736]
Length = 560
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ +AL+AV + T L VP + +A L + +++ + G P E+MK
Sbjct: 278 FDPLTALQAVAEERATVLYGVPTMF--IAELDHPHRAEFDLSTLRTGIMAGATCPIEVMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS T T D LE + V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSPVST-QTAADDDLER-------------------RVASV 375
Query: 136 GKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + +G + TRG VML YW+ A G W+ TGD+
Sbjct: 376 GRTQPHLESKIIDEAGRIVPRGEIGELCTRGYSVMLGYWNNPEATAEALDGACWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGENVYP E+E L +HP + + V+GI + R E +VA
Sbjct: 436 AVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFRHPAVADVQVIGIPDERYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+ C E E L+ C+ K + FK PR F L+ + FP+T
Sbjct: 496 WVK-----------CHPGHDADE-----EELKVFCKGK-IAHFKVPRHF-LFVEAFPMTV 537
Query: 311 TGKIRRDEVR 320
TGK+++ +R
Sbjct: 538 TGKVQKFRMR 547
>gi|395536747|ref|XP_003770373.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Sarcophilus harrisii]
Length = 543
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 154/317 (48%), Gaps = 40/317 (12%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPS 71
P FE K ALEAV Q T + P + D+ + + D +++ + G P
Sbjct: 264 PSFEGKRALEAVTQERATMIYGTPTMFVDMLN----QPDFSSYDISTLRGGVIAGSPAPP 319
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
EL++ +++ AYG TE +S +TFM YD +E + G + P++ Q
Sbjct: 320 ELIRTIIQKMNLTEMVVAYGTTE-NSPVTFMNFYDDNIE---KKINTVGRIMPHTEAQIL 375
Query: 132 GVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 191
GK VE+ + G + RG VML YWD P + + D DI
Sbjct: 376 DPQTGK---QVEINM-------PGELCIRGYCVMLGYWDD----PEKTKDAIDEDKWDIA 421
Query: 192 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 251
++D+ G +VGR I GGEN+YP E+E + P + VVG+ + R+ E + AC
Sbjct: 422 AVDEEGFCKIVGRSKDMIIRGGENIYPAELEDFFHKLPHVQEAQVVGVKDERMGEEICAC 481
Query: 252 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 311
+RL+ +++ ++ E L+ HC+ K L+ FK PR ++++ K +PLT +
Sbjct: 482 IRLKANYEGQ--------------ITPEELKAHCKGK-LSHFKIPR-YIVFVKGYPLTIS 525
Query: 312 GKIRRDEVRREVMSHLK 328
GKI++ ++R + HLK
Sbjct: 526 GKIQKYKLREWMEKHLK 542
>gi|375362485|ref|YP_005130524.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568479|emb|CCF05329.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 546
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A VRL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|239991727|ref|ZP_04712391.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291448729|ref|ZP_06588119.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291351676|gb|EFE78580.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 145/323 (44%), Gaps = 50/323 (15%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV+Q TSL VP + +A L S++ +
Sbjct: 249 GACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+E+MK A++ YGMTETS T D G
Sbjct: 307 GSPCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLARRTGT----------- 355
Query: 126 SVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 356 ---------VGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAE 404
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VV
Sbjct: 405 VIDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVV 464
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R E ++ACV R+ + E L +HCRE+ L +K PR
Sbjct: 465 GVPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHYKIPR 508
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
+ + FP+T +GK+R+ E+R
Sbjct: 509 RLRIL-ETFPMTVSGKVRKIELR 530
>gi|452855793|ref|YP_007497476.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080053|emb|CCP21814.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 546
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A +RL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|118099923|ref|XP_420105.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gallus gallus]
Length = 593
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 39/329 (11%)
Query: 5 MVGACH----VF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MV A H VF P FE K+ LEAV Q + L P + D+ L + S+
Sbjct: 298 MVSALHGSSCVFSAPSFEGKATLEAVSQEKCSFLHGTPTMFIDM--LSQPDFDSYNLSSL 355
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G +P E+MK + +++ AYG TE +S +TFM PT + + +
Sbjct: 356 RGGVIAGSPVPPEIMKVVSTKMHMPEVMVAYGTTE-NSPVTFMGF--PTDDITRRT-ETV 411
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
G++ P++ + + KP P + G + RG VML YW+ V
Sbjct: 412 GSILPHTEAKIEDPETRKPVP----------LNTPGELQVRGYCVMLGYWNDSARTREVI 461
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ + W TGDI ++D+ G ++GR I GGEN+YP E+E L HP + + VVG+
Sbjct: 462 SDDNWYKTGDIATLDEHGYCRIIGRCKDMIIRGGENIYPAEIEQFLHTHPKVEEVQVVGV 521
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
++R+ E V AC+RLR + +C +++ ++ C+ K ++ FK PR +
Sbjct: 522 KDSRMGEEVCACIRLR-----AGQSC-----------AADDIKAFCKGK-ISHFKIPR-Y 563
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
V++ +PLT +GK+++ ++R ++ HL+
Sbjct: 564 VVFVNQYPLTVSGKVQKYKLREQMEKHLQ 592
>gi|404443308|ref|ZP_11008479.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403655602|gb|EJZ10449.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 515
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 150/332 (45%), Gaps = 57/332 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---D 57
+A +VG HV +P F +S EA+E H +T + P ++ + V R
Sbjct: 219 LARNVVGGSHVILPGFTPESVAEAIEHHQITDMFLAPTMIQ-----MFVDSPAAARHDLS 273
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPGQ 114
S+K ++ G + +++ A P+AKL+ AYGMTE + + T +T DP L
Sbjct: 274 SLKHLIYGASPISQAVLERAMRLLPQAKLLQAYGMTELAPTTTVLTAEEHLDPALLR--- 330
Query: 115 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 169
G+ P E+K+ + + V G + RG HVML YW
Sbjct: 331 -------------------SAGRAVPIAEVKIVDEDGNEVPRGTVGEVAARGPHVMLGYW 371
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
++ G W+ TGD G +DD G +++V R I +GGENVY EVE L QHP
Sbjct: 372 NRPEETAQALRGG-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHP 430
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ V+G+ +A E V A V L + ++E LR+HC
Sbjct: 431 SVATCAVIGVPDADWGERVHAVVVLHDG----------------ATTTAEELREHCGSL- 473
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+ +KAPR V + PLT+ K+ + ++R+
Sbjct: 474 IARYKAPRT-VDFVDALPLTAAAKVSKVDLRK 504
>gi|345805217|ref|XP_537673.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Canis lupus familiaris]
Length = 642
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M +M G + P F K ALEA+ + + L P + D+ + + D
Sbjct: 347 MVSVMYGTTLILSSPTFNGKKALEAISKERGSFLYGTPTMFVDILN----QPDFSSYDIS 402
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ + L+ AYG TE +S +TFM + T+E +
Sbjct: 403 TIRGGVIAGSPAPPELIRTIIDKLNMKDLVVAYGTTE-NSPVTFMNFEEDTVEQKAE--- 458
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
VG+ PH E ++ + + ++ G + RG VML YW +
Sbjct: 459 ----------------TVGRILPHTEAQIVNMKTGNLVELNTPGELFIRGYCVMLGYWGE 502
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI +ID G +VGR I GGEN+YP E+E +HP +
Sbjct: 503 PEKTKEAIGPDKWYRTGDIAAIDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHKHPQV 562
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ +AR+ E + AC+RL++ + +E E ++ C+ K ++
Sbjct: 563 LEVQVVGVKDARMGEEICACIRLKKGEKTTE----------------EEIKAFCKGK-IS 605
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 606 HFKIPR-YIVFVTDYPLTVSGKIQKFKLREQMEQHL 640
>gi|343927183|ref|ZP_08766662.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343762921|dbj|GAA13588.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 551
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 45/325 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPS 71
P F+ K+ L+AV +H TSL VP + +A+LA L + S++ + G P
Sbjct: 263 PAFDPKATLDAVAEHRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPE 322
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
++M++ + +++ YGMTETS T + DP + +
Sbjct: 323 QVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELR 362
Query: 132 GVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ + G+ + G + TRG VM YW+ + W+
Sbjct: 363 VTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWM 422
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 423 HTGDLAEMDEAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYG 482
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A VRLR + D ++++ ++ R K PR +V K
Sbjct: 483 EELMAWVRLR------DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKE 525
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGK+R+ +R E L+ L
Sbjct: 526 FPMTVTGKVRKVAMREEATHILEDL 550
>gi|269836393|ref|YP_003318621.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
gi|269785656|gb|ACZ37799.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
Length = 546
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 150/329 (45%), Gaps = 49/329 (14%)
Query: 7 GACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC + +P ++ + LE V+ TSL VP + + L + + +++ +
Sbjct: 248 GAC-IVVPGEAYDPVAVLEMVQAERCTSLYGVPTMF--IGELEHPRFSEFDLSTLRTGIM 304
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+MK + ++ YGMTETS T + DP + G
Sbjct: 305 AGSPCPVEVMKRVQSQMHMTEVAICYGMTETSPVSTQTAIDDPLEKRVGS---------- 354
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
VGK PH+E+K+ + + G + TRG VML YW+ A
Sbjct: 355 ----------VGKVHPHIEVKIIDPATGEIVPRGTPGELCTRGYSVMLGYWNNEEATRQA 404
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ ++DD G V +VGR I GGEN+YP EVE L HP + + V+G
Sbjct: 405 IDAARWMHTGDLATMDDEGYVNIVGRIKDMIIRGGENIYPREVEEFLYTHPAVADVQVIG 464
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R E V+A V+LRE Q ++ E L +CR + T +K PR
Sbjct: 465 VPDERYGEEVMAWVKLREGAQ----------------VTGEELAAYCRGRIAT-YKIPRY 507
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + FP+T TGKI++ +R + L
Sbjct: 508 W-KFTDTFPMTVTGKIQKFRMREMAIEEL 535
>gi|271966242|ref|YP_003340438.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270509417|gb|ACZ87695.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 530
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 151/326 (46%), Gaps = 54/326 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ ++ L AV+Q TSL VP T+ + T G+ + + G
Sbjct: 240 GACVVIPAPGFDPEATLRAVQQERCTSLYGVP-------TMFIAELTLAGQYDLSSLRTG 292
Query: 66 ---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
G P E+MK A++ YGMTETS T MT D +LE +
Sbjct: 293 IMAGSPCPVEVMKRVVTEMNMAEVAICYGMTETSPVST-MTRSDDSLERRTE-------- 343
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
VG+ PHVE+K+ + G + TRG VML YW++
Sbjct: 344 -----------TVGQVMPHVEVKITHPETGLTVPRGEPGELCTRGYSVMLGYWNEPERTA 392
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
W+ TGD+ ++D G V +VGR + GGENVYP EVE L +HP I + V
Sbjct: 393 EAIDTARWMHTGDLATMDADGYVNVVGRIKDMVIRGGENVYPREVEEFLYRHPDIADVQV 452
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E ++A V +R+ L++E +R+ C K L +K P
Sbjct: 453 IGVPDEKYGEELMAWVVIRQGGT---------------PLTAEAVREFCAGK-LAHYKIP 496
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRRE 322
R +V FP+T TGKIR+ E+R E
Sbjct: 497 R-YVHVVDGFPMTVTGKIRKVEMREE 521
>gi|392406245|ref|YP_006442855.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024178|gb|ADT71659.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4]
gi|390619381|gb|AFM20530.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 543
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 162/341 (47%), Gaps = 61/341 (17%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P FE+++ L+A+E TSL VP + +A+LA + D S++
Sbjct: 250 GACMVIPAPSFEARTTLQAIETERCTSLYGVPTMFIAELA-----DSAFGDFDLTSLRTG 304
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK+ + ++ YGMTETS ++ T D ++E
Sbjct: 305 IMAGSPCPVEVMKQVLDRMGITEITICYGMTETSP-VSIQTRADDSIER----------- 352
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG PH+E+K+ + G + TRG VML YW+ +P
Sbjct: 353 --------RVSTVGTVHPHLEIKIVDPETGATVLRGSPGELCTRGYSVMLGYWE----RP 400
Query: 177 SVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
++G + W+ TGD+ +DD G V ++GR + GGEN+YP E+E L HP I+
Sbjct: 401 DWTSGAIDAARWMHTGDLAVMDDAGYVSIIGRNKDMVIRGGENLYPREIEEFLYTHPEIV 460
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E ++A +R++E Q L+ E L C K L
Sbjct: 461 DVQVIGVPDPKYGEELMAWIRMKEGAQ---------------PLTREDLHGFCAGK-LAH 504
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
+K PR + FP+T TGK+R+ E+ RE+ L LP
Sbjct: 505 YKIPR-YAHVVDEFPMTVTGKVRKVEM-REIAIRLLKLPEQ 543
>gi|374367482|ref|ZP_09625545.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101008|gb|EHP42066.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 468
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 154/328 (46%), Gaps = 42/328 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---DS 58
A+ + G HV IP F + LEA+ + VT + P ++ L ++ R S
Sbjct: 164 ALFISGGTHVVIPAFTPLATLEAISRDRVTQITLAPTMLQMLLDWLKQHPGEAARLDMSS 223
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+K I G + L+++A +FP+ YGMTE + T+ P T +A
Sbjct: 224 LKLIGYGASPISQTLLRQAQQTFPETDFAQGYGMTELAP---LATVLGPEYHTE----EA 276
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
F + + GKP VE+K+ + V G I RG +VML YW+Q
Sbjct: 277 FASGKMRAA--------GKPHLCVEVKIVDEFDREVPRGTVGEIAVRGGNVMLGYWNQPE 328
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A G W+ TGD G +D+ G +++V R I SGGEN+Y EVE + P +
Sbjct: 329 ATAQAVRGG-WMHTGDGGYMDEEGLIYVVDRIKDMIVSGGENIYSAEVENAIASQPAVGQ 387
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E V A + L++ + ++E ++ HCR K + G+
Sbjct: 388 CAVIGVPSEKWGETVHAVIVLKQG----------------AIATAEEIQAHCR-KRIAGY 430
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
K PR V +R+ PL+S GKI ++++R+
Sbjct: 431 KCPR-SVEFREALPLSSVGKILKNDLRK 457
>gi|407803049|ref|ZP_11149887.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
gi|407022904|gb|EKE34653.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
Length = 516
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 149/328 (45%), Gaps = 49/328 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + H +P+F+ + L ++Q VT+ + VP ++ LA+ +R+ + S+K
Sbjct: 218 FAVTLAAGTHGIVPRFDVDTVLAFIQQEKVTNTLLVPTMINLLASSVRIGE--YDVSSMK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQA 118
++L G +P ++ A P YG TE S +T + P PG +L A
Sbjct: 276 RMLYGASPMPEAVLNSAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHVPGGAKLRSA 332
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFL 173
G+ A VE+ V V R I RG +VML YW
Sbjct: 333 -----------------GRAAIGVEVMVLDKDDQEVARGTVGEICARGPNVMLGYWGMES 375
Query: 174 AKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A ++ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP +
Sbjct: 376 ATAETLRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQ 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+GI + E V A V LR+ SE+ + HCREK + G
Sbjct: 434 ECAVIGIPDEHWGEAVHALVVLRDGVSASETE----------------IIAHCREK-IAG 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR +P P++ GKI ++E+R
Sbjct: 477 YKVPRSVEFRSEPLPVSGAGKILKNELR 504
>gi|374705636|ref|ZP_09712506.1| AMP-binding domain protein [Pseudomonas sp. S9]
Length = 556
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 149/317 (47%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE +++L+AV Q T L VP + +A L + S++ + G P E+M+
Sbjct: 278 FEPEASLQAVAQERATVLYGVPTMF--IAELDHPRLKAFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ T D LE VT V
Sbjct: 336 RVIKELHMSEVQIAYGMTETSP-VSLQTAADDALEV---------RVTS----------V 375
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPQLESKIIDEQGAIVSRGQTGELCTRGYSVMLGYWNNPQASAEAIDTEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E L H I + V+G+ +++ E +
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHAAIADVQVIGVPDSKYGEEIAV 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++L S CD++ LR++C+ N+ FK PR + + FP+T
Sbjct: 496 WIKLHPG-----SGCDENQ-----------LREYCK-ANIAYFKVPRYY-RFVDEFPMTV 537
Query: 311 TGKIRRDEVRREVMSHL 327
TGKI++ +R + ++ L
Sbjct: 538 TGKIQKFRMREQTIAEL 554
>gi|453050271|gb|EME97816.1| AMP-binding domain protein [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 543
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 46/329 (13%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AVE+ TSL VP + +A L S++ +
Sbjct: 249 GACVVIPAPVFDPTATLHAVERERCTSLYGVPTMF--IAELDLPDFATYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+E+MK ++ YGMTETS T D L + G V
Sbjct: 307 GSPCPAEVMKRVVAEMHMEEVTICYGMTETSPVSTQTRRED-------DLDRRTGTV--- 356
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
G+ PH+E+K+ + G + TRG VML YW++
Sbjct: 357 ----------GRVLPHIEVKIVDPETGATVPRGEHGELCTRGYSVMLGYWNEPERTAEAI 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD+ +D+ G V +VGR I GGENVYP E+E L HP I + V+G+
Sbjct: 407 DADRWMHTGDLAVMDEEGYVRIVGRSKDMIIRGGENVYPREIEEFLHTHPKIADVQVIGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R+ E ++ACV L + LS + L ++CR + L +K PR +
Sbjct: 467 PDDRMGEEIMACVILHDDAGG---------------LSRDELARYCRGR-LAHYKVPR-Y 509
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+ + FP+T +GK+R+ E+R E ++ L+
Sbjct: 510 LRVMESFPMTVSGKVRKVELREEAVALLE 538
>gi|365155083|ref|ZP_09351476.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
gi|363628799|gb|EHL79508.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
Length = 546
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 52/337 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F+ ++ L+ VE+ T+L VP + ++ L + +++
Sbjct: 251 LASVSVGATMVPVQEFDPEAVLQTVEKEKCTALHGVPTMF--ISELNHSNFSKYNLTTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK + YG TE+S +T DP +ET
Sbjct: 309 TGVMAGSNCPMEVMKAVMEKMGMKDITICYGQTESSPVITQSRTDDPVSLRVET------ 362
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
VGK PHVE+K+ GS+ V G + TRG HVM Y+
Sbjct: 363 -----------------VGKALPHVEVKIVEPGSNRVLPPNTQGELCTRGYHVMKGYYKN 405
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A V + WL TGD+ +D+ G V + GR I GGEN+YP E+E L QHP I
Sbjct: 406 PEATKEVIDEDHWLHTGDLAVMDENGYVRITGRLKDMIIRGGENIYPREIEEFLYQHPKI 465
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + + E V A + L+E +E +R C+ K ++
Sbjct: 466 LDVQVVGVPDEKFGEEVGAWIILKEGET----------------ADAEEIRAFCKGK-IS 508
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P+ +V + +P+T++GKI++ ++R + +K
Sbjct: 509 RHKVPK-YVFFTDEYPMTASGKIQKFKLRERYLEDIK 544
>gi|394994435|ref|ZP_10387152.1| AMP-binding domain protein [Bacillus sp. 916]
gi|393804698|gb|EJD66100.1| AMP-binding domain protein [Bacillus sp. 916]
Length = 546
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 158/337 (46%), Gaps = 52/337 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP---TLETPGQLPQ 117
+ G P+E+M+E + AYG TE S +T DP +ET G
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDPFERRVETAG---- 364
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 171
C PH+E+++ G+S G + TRG HVM Y+
Sbjct: 365 ----------------CA---LPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKN 405
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A + WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP +
Sbjct: 406 QEATEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAV 465
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + + E A +RL++ Q++ S+E +R C+E ++
Sbjct: 466 ADVQVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIA 508
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 509 RYKVPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|385264992|ref|ZP_10043079.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
gi|385149488|gb|EIF13425.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
Length = 546
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 157/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + + +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFKRRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
G+ PH+E ++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEFRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A VRL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|421745630|ref|ZP_16183477.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
gi|409775909|gb|EKN57351.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
Length = 519
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 158/326 (48%), Gaps = 34/326 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ L+ G V +P+F + L A+E H ++ +I VP ++ L L S+
Sbjct: 212 IGQLIAGGSCVTLPQFRADILLSAIETHRISDIIVVPTMLQSL--LDHPGFDAARLQSLN 269
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I G +P +L+ A ++P A+ AYGMTET++++ P A
Sbjct: 270 RIAFGAAPMPPDLLARALEAWPNAEFFQAYGMTETAAAVCIN-------------PPA-- 314
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
N P + + VG+ E++V + V G I+ RG VM YW+Q A
Sbjct: 315 NHRPGAGAERHRHSVGRAGLGAEIRVIDPQGNEVPRGTVGEIVVRGPMVMRGYWNQPDAT 374
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + WL TGD G +D+ G +++ R I SGGEN+Y EVE L HP +
Sbjct: 375 -AQALRDGWLHTGDGGWMDEDGYLFIADRLKDMIISGGENIYSAEVETALRGHPRVAQAA 433
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ +AR E V A V + +S + + + LS E L Q CRE+ L G+K
Sbjct: 434 VIGVPDARWGERVHAVVVVEDSASLAPPD--------DAALSDE-LTQWCRER-LAGYKC 483
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR F + PL++ GK+ ++E+R+
Sbjct: 484 PRSFA-YVDGLPLSAAGKVLKNELRQ 508
>gi|375097374|ref|ZP_09743639.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658107|gb|EHR52940.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 550
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 149/324 (45%), Gaps = 48/324 (14%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP FE + L AV+ TSL VP + +A L S++ +
Sbjct: 253 GACMV-IPAQAFEPAATLRAVQAQRCTSLYGVPTMF--IAELAEADFDSYDLSSLRTGIM 309
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+MK+ A++ YGMTETS T T D ++E
Sbjct: 310 AGSPCPVEVMKQVIERMGMAEVTICYGMTETSPVST-QTRADDSIER------------- 355
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
+ VG+ PH+E+K+ + G TRG VML YW+Q
Sbjct: 356 ------RVSTVGRVHPHLEVKIVDPETGLTVPRGTPGEFCTRGYSVMLGYWEQPEQTADA 409
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP ++ V+G
Sbjct: 410 IDAARWMHTGDLAVMDDEGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIG 469
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R E ++A VR+RE L++E LR+ C+ + L +K PR
Sbjct: 470 VPDRRYGEELMAWVRMREGAP---------------PLTAEALREFCQGR-LAHYKIPR- 512
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+V + FP+T TGK+R+ E+R +
Sbjct: 513 YVHVVEEFPMTVTGKVRKVEMREK 536
>gi|420866096|ref|ZP_15329485.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|420870891|ref|ZP_15334273.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|420875337|ref|ZP_15338713.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|420988058|ref|ZP_15451214.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|421040590|ref|ZP_15503598.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|421045689|ref|ZP_15508689.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
gi|392064812|gb|EIT90661.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|392066812|gb|EIT92660.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|392070361|gb|EIT96208.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|392182337|gb|EIV07988.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|392221518|gb|EIV47041.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|392235142|gb|EIV60640.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
Length = 515
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G+ HV +P F + L+A+ H V ++ VP ++ L + ++
Sbjct: 219 LAGNLSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 277 SITYGASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA-- 332
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
G+ APH E+++ + V G ++ +G +VML YW + +
Sbjct: 333 ---------------GRAAPHCEVRIVDPNDNEVPRGEIGEVIVKGDNVMLGYW-ELPEE 376
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + W+ TGD G +DD G V++V R + +GGENVY EVE L +HP +
Sbjct: 377 SAAAIRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACA 436
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + + E V A V Q CD L++HCRE ++ +K
Sbjct: 437 VIGIPDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKV 479
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR F + PL+ GKI + +R++
Sbjct: 480 PRSFEFVDE-LPLSGAGKILKRVLRQK 505
>gi|409393138|ref|ZP_11244621.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403197125|dbj|GAB87855.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 551
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 45/325 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPS 71
P F+ K+ L+AV ++ TSL VP + +A+LA L + S++ + G P
Sbjct: 263 PAFDPKATLDAVAEYRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPE 322
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
++M++ + +++ YGMTETS T + DP + +
Sbjct: 323 QVMRQVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELR 362
Query: 132 GVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ + G+ + G + TRG VM YW+ + W+
Sbjct: 363 VTTVGQVGPHLEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWM 422
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 423 HTGDLAEMDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYG 482
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A VRLR + D + ++ ++ R K PR +V K
Sbjct: 483 EELMAWVRLR------DHATDLTVEDVRAFADGKIARH----------KIPR-YVHVVKE 525
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSL 330
FP+T TGKIR+ +R E L+ L
Sbjct: 526 FPMTVTGKIRKVAMREEATHILEDL 550
>gi|407695875|ref|YP_006820663.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253213|gb|AFT70320.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 516
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 147/329 (44%), Gaps = 51/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + G H +P+F+ L +E+ VT + VP ++ L + ++K+ SVK
Sbjct: 218 FAVTLAGGTHGIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGKIKEF--DVSSVK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++L G +P ++ A P A YG TE S +T +
Sbjct: 276 RMLYGASAMPESVLISAMKQMPDALFAQGYGQTEASPIITAL------------------ 317
Query: 121 NVTPNSVHQPQG---VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQF 172
P H P G G+ A VE+ + + VG I RG +VML YW
Sbjct: 318 ---PPDFHVPGGDKLRSAGRAALGVEVAIFDKDDTERPRCEVGEICARGPNVMLGYWGME 374
Query: 173 LAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A ++ G WL TGD+G +D+ G V++V R I SGGEN++ EVE+ + HP +
Sbjct: 375 EASAEALRNG--WLHTGDLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAV 432
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
VVGI + E V A V R+ +L+ E L HCRE +
Sbjct: 433 QECAVVGIPHDEWVETVHAIVVPRQGH----------------VLTEEELLSHCREL-IA 475
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+K PR +P P++ GKI ++E+R
Sbjct: 476 GYKLPRSIEFRSEPLPISGAGKILKNELR 504
>gi|288555267|ref|YP_003427202.1| acetylCoA synthase AMP-binding subunit [Bacillus pseudofirmus OF4]
gi|288546427|gb|ADC50310.1| acetylCoA synthase, AMP-binding domain protein [Bacillus
pseudofirmus OF4]
Length = 548
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 46/328 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K+ LEAV + T L VP + + L S++
Sbjct: 250 LACVSVGATMVPVEEFSPKAVLEAVSKEKCTGLHGVPTMF--IGELNDPDFDTYDLSSLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK + +++ AYG TE+S +T + DP +
Sbjct: 308 TGIMAGSNCPIEVMKAVVDKMGASEITIAYGQTESSPVITQTRVDDPLM----------- 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ VG+ P+VE+K+ G++ G + TRG HVM Y+ A
Sbjct: 357 ---------LRVESVGRALPNVEVKIVEPGTNDEVPRGVQGELCTRGYHVMKGYYKNPEA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ T + WL TGD+ +D+ G + GR I GGEN+YP E+E L QHP ++ +
Sbjct: 408 TKAAITEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPKVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + + E V A ++L+E ES +++ LR+ C K + +K
Sbjct: 468 QVVGIPDEKYGEEVSAWIKLKE----GEST------------TADELRKDCMGK-IAAYK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR ++ + +P+T++GKI++ ++R++
Sbjct: 511 IPR-YIAFVDEYPMTASGKIQKFKLRQQ 537
>gi|169631633|ref|YP_001705282.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
ATCC 19977]
gi|419708247|ref|ZP_14235717.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|420912220|ref|ZP_15375532.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|420918674|ref|ZP_15381977.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|420923844|ref|ZP_15387140.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|420929503|ref|ZP_15392782.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|420933809|ref|ZP_15397082.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|420936357|ref|ZP_15399626.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|420944068|ref|ZP_15407323.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|420949493|ref|ZP_15412742.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|420969190|ref|ZP_15432393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
gi|420979841|ref|ZP_15443018.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|420985226|ref|ZP_15448393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|421010288|ref|ZP_15473397.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|421015396|ref|ZP_15478470.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|421020490|ref|ZP_15483546.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|421025231|ref|ZP_15488274.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|421030972|ref|ZP_15494002.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|421036476|ref|ZP_15499493.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|169243600|emb|CAM64628.1| Putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus]
gi|382944279|gb|EIC68587.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|392111565|gb|EIU37335.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|392114214|gb|EIU39983.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|392126491|gb|EIU52242.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|392128497|gb|EIU54247.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|392132221|gb|EIU57966.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|392141872|gb|EIU67597.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|392145674|gb|EIU71398.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|392150534|gb|EIU76247.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|392164119|gb|EIU89808.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|392170222|gb|EIU95900.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|392195894|gb|EIV21513.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|392196031|gb|EIV21649.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|392206213|gb|EIV31796.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|392208754|gb|EIV34326.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|392218854|gb|EIV44379.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|392220328|gb|EIV45852.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|392244846|gb|EIV70324.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
Length = 515
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G+ HV +P F + L+A+ H V ++ VP ++ L + ++
Sbjct: 219 LAGNLSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 277 SITYGASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA-- 332
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
G+ APH E+++ + V G ++ +G +VML YW + +
Sbjct: 333 ---------------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEE 376
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + W+ TGD G +DD G V++V R + +GGENVY EVE L +HP +
Sbjct: 377 SAAAIRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACA 436
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + + E V A V Q CD L++HCRE ++ +K
Sbjct: 437 VIGIPDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKV 479
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR F + PL+ GKI + +R++
Sbjct: 480 PRSFEFVDE-LPLSGAGKILKRVLRQK 505
>gi|419716292|ref|ZP_14243690.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
gi|382941498|gb|EIC65817.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
Length = 515
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G+ HV +P F + L+A+ H V ++ VP ++ L + ++
Sbjct: 219 LAGNLSGSTHVIVPSFSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 277 SITYGASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA-- 332
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
G+ APH E+++ + V G ++ +G +VML YW + +
Sbjct: 333 ---------------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEE 376
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + W+ TGD G +DD G V++V R + +GGENVY EVE L +HP +
Sbjct: 377 SAAAIRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACA 436
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + + E V A V Q CD L++HCRE ++ +K
Sbjct: 437 VIGIPDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKV 479
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR F + PL+ GKI + +R++
Sbjct: 480 PRSFEFVDE-LPLSGAGKILKRVLRQK 505
>gi|427430670|ref|ZP_18920432.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
gi|425878639|gb|EKV27353.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
Length = 566
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 152/318 (47%), Gaps = 47/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LE VE+ T L VP + +A L + S++ + G P E+MK
Sbjct: 286 FDPLAVLETVEREKCTGLYGVPTMF--IAQLDHPEFKSFNLSSLRTGIMAGSPCPIEVMK 343
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ AYGMTETS ++F T D LE + V
Sbjct: 344 RVIAEMNMEEVTIAYGMTETSP-VSFQTAADDELEA-------------------RVSTV 383
Query: 136 GKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ DG G + TRG VML YW D+ + S+ + W+ TGD
Sbjct: 384 GRVQPHLEVKIVDLDGRIVPRGTAGELCTRGYSVMLGYWNDEEKTRESIDSAG-WMHTGD 442
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G +VGR + GGEN+YP E+E L +HP + + V+G+ + + E +
Sbjct: 443 LATLDEHGYCKIVGRIKDMVIRGGENIYPREIEEFLYRHPAVNDVQVIGVPDKKYGEELC 502
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+RLRE + +E E +R+ C+ + +K PR ++ + FP+T
Sbjct: 503 ACIRLREGHEATE----------------EEIREFCK-GQIAHYKIPR-YIRFVDEFPMT 544
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+++ +R+ + L
Sbjct: 545 VTGKVQKYVMRKHIAEDL 562
>gi|358448423|ref|ZP_09158927.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
gi|357227520|gb|EHJ05981.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
Length = 562
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE KS L+AV Q T+L VP + +A L + S++ + G P+E+MK
Sbjct: 280 FEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGIMAGSICPAEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 338 KVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTV 377
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD
Sbjct: 378 GRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREAIDSAGWMHTGD 437
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G V +VGR + GGEN+YP+E+E L HP I + V GI + + E ++
Sbjct: 438 LATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELI 497
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L D + +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 498 AWVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPKNYKFVDE-FPMT 540
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 541 VTGKIQKFKMRE 552
>gi|452879218|ref|ZP_21956348.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
gi|452184192|gb|EME11210.1| AMP-binding domain protein, partial [Pseudomonas aeruginosa
VRFPA01]
Length = 373
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 88 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRTGIMAGATCPIEV 145
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ + A++ AYGMTETS ++ T D LE VT
Sbjct: 146 MRRVIDEMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 185
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 186 TVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 245
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 246 DLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 305
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + + E LR C+E+ + FK PR F + FP+
Sbjct: 306 VAWIKLHPGHRADD----------------EQLRAFCKER-IAHFKVPRHFKFVDE-FPM 347
Query: 309 TSTGKIRRDEVRREVMSHLKSLP 331
T TGKI++ +R + ++ LP
Sbjct: 348 TVTGKIQKFRMREVSIQEVRLLP 370
>gi|311068394|ref|YP_003973317.1| AMP-binding protein [Bacillus atrophaeus 1942]
gi|419823695|ref|ZP_14347237.1| AMP-binding domain protein [Bacillus atrophaeus C89]
gi|310868911|gb|ADP32386.1| AMP-binding domain protein [Bacillus atrophaeus 1942]
gi|388472185|gb|EIM08966.1| AMP-binding domain protein [Bacillus atrophaeus C89]
Length = 548
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 48/338 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + + +F+ + L AVEQ T+L VP + +A L ++
Sbjct: 251 LACVSAGAAMIPVQEFDPAAVLTAVEQEKCTALHGVPTMF--IAELHHKHFPSYDLSHLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK ++ AYG TE S +T T D +L
Sbjct: 309 TGIMAGSACPIEVMKAVIERMGMKEITIAYGQTEASPVIT-QTRADDSL----------- 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
Q + VG+ PH+E+K+ G+S G + TRG HVM Y+ A
Sbjct: 357 --------QRRVETVGRALPHIEVKIVQPGTSREVARGVQGELCTRGYHVMKGYYKDPEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
S + WL TGD+ +D+ G + GR + GGEN+YP E+E +L QHP ++ +
Sbjct: 409 TASAIDADGWLHTGDLAVMDEQGYCRITGRLKDMLIRGGENIYPREIEELLYQHPKVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A V+L+E Q++ S E L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWVKLKEG---------QTA-------SPEELQAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMS--HLKSL 330
PR ++++ +P+T++GKI++ ++R + + HL S
Sbjct: 512 IPR-YIVFTNEYPMTASGKIQKFKLREKAIQQFHLSSF 548
>gi|385330740|ref|YP_005884691.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
gi|311693890|gb|ADP96763.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
Length = 548
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE KS L+AV Q T+L VP + +A L + S++ + G P+E+MK
Sbjct: 266 FEPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGIMAGSICPAEVMK 323
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 324 KVNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTV 363
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD
Sbjct: 364 GRTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREAIDSAGWMHTGD 423
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G V +VGR + GGEN+YP+E+E L HP I + V GI + + E ++
Sbjct: 424 LATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELI 483
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L D + +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 484 AWVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPKNYKFVDE-FPMT 526
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 527 VTGKIQKFKMRE 538
>gi|365872522|ref|ZP_09412059.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|414580929|ref|ZP_11438069.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|420880463|ref|ZP_15343830.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|420886271|ref|ZP_15349631.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|420890605|ref|ZP_15353952.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|420895102|ref|ZP_15358441.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|420900440|ref|ZP_15363771.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|420907863|ref|ZP_15371181.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|420974296|ref|ZP_15437487.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|421051638|ref|ZP_15514632.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363993205|gb|EHM14430.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392077865|gb|EIU03692.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|392082034|gb|EIU07860.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|392085372|gb|EIU11197.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|392094414|gb|EIU20209.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|392097801|gb|EIU23595.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|392105767|gb|EIU31553.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|392116081|gb|EIU41849.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|392162179|gb|EIU87869.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|392240241|gb|EIV65734.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898]
Length = 515
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFTPQEVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAA 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|403528225|ref|YP_006663112.1| acyl-CoA synthetase [Arthrobacter sp. Rue61a]
gi|403230652|gb|AFR30074.1| putative acyl-CoA synthetase [Arthrobacter sp. Rue61a]
Length = 558
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 148/318 (46%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F + +ALEAV+ TSL VP + +A L +++ + G P E+M+
Sbjct: 278 FNASAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT TLE + V
Sbjct: 336 RVIDEMHMVDVAICYGMTETSPVST-MTRAGDTLEQ-------------------RTSTV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E +V GS V G + TRG VM YW Q E W+ TGD
Sbjct: 376 GRTMPHLESRVIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGD 435
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR + GGEN+YP E+E L HP I + V+G+ + + E ++
Sbjct: 436 LARMDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELM 495
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ L K L++E L ++CR K L +K PR +V R+ FP+T
Sbjct: 496 ACIIL---------------KPGSPALTAEELAEYCRGK-LAHYKIPR-YVDVRESFPMT 538
Query: 310 STGKIRRDEVRREVMSHL 327
+GK+R+ ++R+E +S L
Sbjct: 539 VSGKVRKVDMRQEAVSRL 556
>gi|302528169|ref|ZP_07280511.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302437064|gb|EFL08880.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 501
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 61/326 (18%)
Query: 3 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVK 60
M G V +PKF++ + L+ +E+H T VP + L +++ GRD S++
Sbjct: 222 MTRFGGSLVLVPKFDAAAVLDEMERHRCTLFSGVPTMYVAL-----LQQDLAGRDLSSLR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++GG +P E+++ F ++ YG++ET+S TF
Sbjct: 277 SAVSGGASMPGEVLRAFEKKFDGVVVLEGYGLSETASGTTF------------------- 317
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-------DGSSHVGRILTRGAHVMLRYWDQFL 173
N+ S Q + + +GKP VE+KV G VG I+ RG +VM Y+
Sbjct: 318 NI---SAEQRKVLSIGKPIWGVEVKVVDRAGTELGAGPDQVGEIVVRGHNVMKGYY---- 370
Query: 174 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+P + + W TGD+G D+ G ++V R + GG NVYP E+E VL +HPG
Sbjct: 371 GRPDATAEAIRDGWFHTGDLGYRDEEGYYFVVDRLKDLVIRGGYNVYPREIEEVLYEHPG 430
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ VVG + RL E VVA V LR S+++ D+ L +HC+ + L
Sbjct: 431 VAEAAVVGEPHERLGEEVVAYVVLRAG---SDASVDE-------------LAEHCKGR-L 473
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRR 316
+K PR L + P TGKI +
Sbjct: 474 AAYKYPRTITLLDR-LPKGPTGKILK 498
>gi|297171535|gb|ADI22533.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF0500_09M11]
gi|297182289|gb|ADI18458.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF4000_13G19]
Length = 516
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 149/322 (46%), Gaps = 37/322 (11%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + G H +P+F+ L +E+ VT + VP ++ L + R+K+ SVK
Sbjct: 218 FAVTLAGGTHGIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGRIKEF--DVSSVK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++L G +P ++ A P A YG TE S +T + P PG G
Sbjct: 276 RMLYGASAMPESVLISAMKQMPDALFAQGYGQTEASPIITALP---PDFHVPG------G 326
Query: 121 NVTPNSVHQPQGVCVG-KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD-QFLAKPSV 178
+ ++ GV V +E C VG I RG +VML YW + + ++
Sbjct: 327 DKLRSAGRAALGVEVAIFDKDDIERPRC-----EVGEICARGPNVMLGYWGMEEASAEAL 381
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G WL TGD+G +D+ G V++V R I SGGEN++ EVE+ + HP + VVG
Sbjct: 382 RNG--WLHTGDLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAVQECAVVG 439
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + E V A V R+ +L+ + L HCRE + G+K PR
Sbjct: 440 IPHDEWVETVHAIVVPRQGH----------------VLTEDELLSHCREL-IAGYKLPRS 482
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+P P++ GKI ++E+R
Sbjct: 483 IEFRSEPLPVSGAGKILKNELR 504
>gi|397680719|ref|YP_006522254.1| long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
gi|418251010|ref|ZP_12877212.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|420954176|ref|ZP_15417418.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|420958351|ref|ZP_15421585.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|420963308|ref|ZP_15426532.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|420994292|ref|ZP_15457438.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|421000069|ref|ZP_15463204.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|421004591|ref|ZP_15467713.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|353449200|gb|EHB97598.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|392153089|gb|EIU78796.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|392178851|gb|EIV04504.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|392180394|gb|EIV06046.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|392193294|gb|EIV18918.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|392246221|gb|EIV71698.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|392248077|gb|EIV73553.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|395458984|gb|AFN64647.1| Long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
Length = 515
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G+ HV +P F + L+A+ H V ++ VP ++ L + ++
Sbjct: 219 LAGNLSGSTHVIVPSFTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 277 SITYGASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA-- 332
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
G+ APH E+++ + V G ++ +G +VML YW + +
Sbjct: 333 ---------------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEE 376
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + W+ TGD G +DD G V++V R + +GGENVY EVE L +HP +
Sbjct: 377 SAAAIRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACA 436
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + + E V A V Q CD L++HCRE ++ +K
Sbjct: 437 VIGIPDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKV 479
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR F + PL+ GKI + +R++
Sbjct: 480 PRSFEFVDE-LPLSGAGKILKRVLRQK 505
>gi|323489937|ref|ZP_08095158.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
gi|323396233|gb|EGA89058.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
Length = 563
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 159/339 (46%), Gaps = 57/339 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M+G V +PKF+ ++AL+ + + T P + L + K S++ L
Sbjct: 272 VMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMNHPDIAKY--DLSSIEACL 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP+E+ +E + KL+ YG+TETS ++ L +G T
Sbjct: 330 SGSAPLPAEV-QEKFEALTGGKLVEGYGLTETSP-VSHSNL-------------VWGERT 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 177
SV G P P + K+ G++ +G I +G VM YW+ KP
Sbjct: 375 KGSV--------GLPYPDTDSKIFQTGTTTPIPNGEIGEIAIKGPQVMKGYWN----KPE 422
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +H +
Sbjct: 423 ETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAVQEC 482
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV GI + E V A + L+E + +E E L +CRE+ L FK
Sbjct: 483 VVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNTYCREQ-LASFK 525
Query: 295 APRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 332
PR++ +RK P T+ GKI RR V EV +++PS
Sbjct: 526 VPRIYE-FRKELPKTAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|418422838|ref|ZP_12996009.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
gi|363993911|gb|EHM15133.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
Length = 515
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G+ HV +P F + L+A+ H V ++ VP ++ L + ++ I
Sbjct: 223 LSGSTHVIVPSFTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + +++ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 281 GASVISEAVLQRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA------ 332
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
G+ APH E+++ + V G ++ +G +VML YW + + + +
Sbjct: 333 -----------GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPDESAAA 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD G +DD G V++V R + +GGENVY EVE L +HP + V+GI
Sbjct: 381 IRDGWMHTGDAGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGI 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A V Q CD L++HCRE ++ +K PR F
Sbjct: 441 PDEQWGERVHAVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSF 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
+ PL+ GKI + +R++
Sbjct: 484 EFVDE-LPLSGAGKILKRVLRQK 505
>gi|71278812|ref|YP_267411.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
gi|71144552|gb|AAZ25025.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
Length = 520
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 44/327 (13%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
AM++ G VF+P FE+ S +EA+E V ++ VP ++ + + S+K
Sbjct: 220 AMVIGGLSQVFVPYFEATSVIEAIEHKQVNHVLLVPTMVTMMLATPALDNA--NFSSLKH 277
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAF 119
I+ G +P + A K I AYG +E S ++ + LE P G+L A
Sbjct: 278 IIYGASPMPEGTLIAAMEKMSSVKFIQAYGQSELSPVISILPAEYHVLEGPNAGKLRSA- 336
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLA 174
G+PA V +++ + + VG I G + ML YW+
Sbjct: 337 ----------------GRPAYCVSVEMRDENGKVLPTGKVGEIAASGPNSMLGYWNN-TE 379
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + + W+ TGD G +D+ G ++LV R I +GGENV+ EVE L HP I
Sbjct: 380 QTAATLIDGWVLTGDAGYMDEDGFIFLVDRLKDMIVTGGENVFSAEVENALSHHPAIQES 439
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV+GI + + E V A +RL E + ++ E + HCRE + G+K
Sbjct: 440 VVLGIPSEQWGESVHAILRLNEGQE----------------ITDEEIFSHCREY-IAGYK 482
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRR 321
P+ + + FP+T GKI ++E+R
Sbjct: 483 VPQSIEIRVEAFPITGAGKIMKNELRE 509
>gi|387813582|ref|YP_005429064.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338594|emb|CCG94641.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 562
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ K+ L+AV Q T+L VP + +A L + +++ + G P+E+MK
Sbjct: 280 FDPKTVLQAVHQEKATALYGVPTMF--IAELADPEFDSYDLSTLRTGIMAGSICPAEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 338 KVNGKMHMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTV 377
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD
Sbjct: 378 GRTQPHLETKIVDPGTGNVMPRGEIGELCTRGYSVMLKYWNNEEKTREAIDDAGWMHTGD 437
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGEN+YP+E+E L HP I + V GI + + E ++
Sbjct: 438 LATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDEKYGEELI 497
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR + D +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 498 AWVKLR-------PDADP--------VTAEDLQAFCKGK-IAHFKIPKNY-KFVDAFPMT 540
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 541 VTGKIQKFKMRE 552
>gi|298714511|emb|CBJ27533.1| Acyl-CoA Synthase, 2,3-dihydroxybenzoyl)adenylate synthase
[Ectocarpus siliculosus]
Length = 623
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 37/343 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS-- 58
+A+ +VG CHVF+P+F A+ A++ V S++ VP ++ L + + +
Sbjct: 292 LAVTLVGGCHVFVPRFAPGCAIAAIQAGRVNSIVVVPTMLHMLVKEASSESSTSDDTANP 351
Query: 59 ---VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 115
V ++ GG + L + A P ++ + Y TE S++ F + P+L +
Sbjct: 352 LAAVDTVVVGGQPMSGRLERLARGCMPGSRFVQTYACTEAGSTIAFA--FSPSLGASQRD 409
Query: 116 PQA---FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------------VGRILTR 160
P + P H+ G PA HVE++V GSS VG + TR
Sbjct: 410 PNGGCGTKSTVPERAHELWAT-AGSPAEHVEIRVVERGSSDGPHPASPASAGTVGEVETR 468
Query: 161 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD-GGNVWLVGRRNGRIKSGGENVYPE 219
G HVM YW++ + WL TGD+G +D+ G + +VGR IK+GGE V+
Sbjct: 469 GPHVMKGYWNRPDLTSEAIRPDGWLRTGDLGRLDETSGRLMIVGRAKDVIKTGGEKVHSS 528
Query: 220 EVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES--NCDQSSKNKELLLS 277
EVE+VLL+H + G+ + RL E V A V L ++ Q + CD++
Sbjct: 529 EVESVLLRHVWVAEAAAYGVDDERLGEKVAASVVLDDAAQDDDGPITCDRARA------- 581
Query: 278 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
VL + C +L+ +K PR + P S GK+ R +R
Sbjct: 582 --VLDRFC-GLHLSPYKRPRQIHVV-PALPRNSAGKVLRHMLR 620
>gi|379708192|ref|YP_005263397.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
gi|374845691|emb|CCF62757.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
Length = 515
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 57/329 (17%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ A HVF+P F LEA+ +H VT + VP ++ L SV+ ++
Sbjct: 223 LADATHVFVPAFTPAGVLEAIARHRVTDALLVPTMIQMLVD--DPAAASHDLSSVRHLVY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAFGN 121
G + +++ A +FP A AYGMTE S T ++ D P L
Sbjct: 281 GASPISEAVLERAMATFPDAGFTQAYGMTELSPIATLLSPADHLRPELRR---------- 330
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
G+ APHVE+++ + + V G ++ RG +VML YW+ KP
Sbjct: 331 ------------SAGRAAPHVEVRIVDETGTEVPRGEVGEVVARGDNVMLGYWN----KP 374
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + W+ TGD G +D+ G V++V R I +GGENVY EVE + HP +
Sbjct: 375 EATAEAIRDGWMHTGDGGRMDEQGYVFIVDRIKDMIITGGENVYSVEVENAVAAHPSVAA 434
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E V A + L+ + +++ +R+HC+ + +
Sbjct: 435 CAVIGVPDDQWGERVHAVIVLQPGAELDDND----------------VREHCKSL-IANY 477
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR V + P++ GKI + E+R+E
Sbjct: 478 KIPR-SVAFVDALPVSGAGKILKRELRKE 505
>gi|425734007|ref|ZP_18852327.1| AMP-binding domain protein [Brevibacterium casei S18]
gi|425482447|gb|EKU49604.1| AMP-binding domain protein [Brevibacterium casei S18]
Length = 561
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 154/329 (46%), Gaps = 46/329 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA V P F+ ++L AV + TSL VP + +A L + S+
Sbjct: 264 LAALSHGASIVLPSPGFDPAASLTAVAEEKATSLYGVPTMF--IAELGLPDFSDFDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + +++ YGMTETS T MT D +LE +
Sbjct: 322 RTGIMAGSPCPVEVMRHVIHDMNMSEVAICYGMTETSPVST-MTRVDDSLEARTE----- 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
VG+ PHVE+K+ + G + TRG VML YW++
Sbjct: 376 --------------TVGRVMPHVEVKIVDPVTGQTMPRGQKGELCTRGYSVMLGYWEEPE 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ +DD G V + GR + GGENVYP E+E L QHP I
Sbjct: 422 KTAEAIDSARWMHTGDLAIMDDDGYVDISGRIKDMVIRGGENVYPREIEEFLYQHPAISD 481
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+++ + E ++A V L++ + L++E +R+ + L F
Sbjct: 482 VQVIGVSDEKYGEELMAWVILKDGYD---------------TLTAEDVREFAAGR-LAHF 525
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR +V R FP+T +GKIR+ E+R E
Sbjct: 526 KIPR-YVEVRDSFPMTVSGKIRKVELREE 553
>gi|196247831|ref|ZP_03146533.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|196212615|gb|EDY07372.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 539
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ--YGISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRDFEEK-TGAVVLEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + +V+
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
+ E V A + L++ Q SE + + +HCR KNL +K PR+ V
Sbjct: 472 SYRGETVKAVIVLKDGQQASEDD----------------IIRHCR-KNLASYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRTELPKTNVGKILRRALREE 534
>gi|384103622|ref|ZP_10004594.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383838861|gb|EID78223.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 514
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 49/331 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
MA +VG VF +FE L+ + +H VT++ + P ++ L+ ++ D S
Sbjct: 214 MAQTLVGGTLVFANRFEPDEVLQLLGRHRVTTMTSTPGML----QLLYTHPSFPAADVTS 269
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+ I+ G +P ++ A +FP A+ + YGMTET+ +L T G
Sbjct: 270 LTTIVYGAAPMPEAVLTRAMAAFPNAQFVQGYGMTETA---VIASLLGATHRLGG----- 321
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
P+ G+ HV++ + + + V G ILTRG ++ML YW++
Sbjct: 322 -----------PRLKSAGRATLHVQIIIADEDGNEVPRGAVGEILTRGDNIMLGYWNRPE 370
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ G WL TGD+ +DD G +++V R I +GGENVY EVE VL HP ++
Sbjct: 371 ETAAALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSTEVENVLSHHPAVLR 429
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E V A + Q + ++ E +R+H + + L GF
Sbjct: 430 CAVIGVPDEQWGERVHAII------------VPQPGQT----VAVEEIREHVKTR-LAGF 472
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
KAPR L + T+TGKI + +R+ +
Sbjct: 473 KAPRTIELVQA-LATTATGKIDKRALRQHTL 502
>gi|9957179|gb|AAG09247.1|AF176639_1 long chain fatty acid-CoA ligase [Pseudomonas stutzeri]
Length = 567
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ S L+AV + T L VP + +A L ++ S++ + G P E+MK
Sbjct: 282 FDPLSTLQAVAEERATVLYGVPTMF--IAELDHPRRAEFDLSSLRTGIMAGATCPIEVMK 339
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS T DP + + V
Sbjct: 340 RVIEQMHMAEVQIAYGMTETSPVSTQSAADDPL--------------------ELRVASV 379
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + + +G + TRG VML YW+ A W+ +GD+
Sbjct: 380 GRTQPHLETKLVDEQGNVVPRGQIGELCTRGYSVMLGYWNNQEATQESIDEAKWMHSGDL 439
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGENVYP E+E L HP + + VVGI +++ E V A
Sbjct: 440 AVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFGHPAVADVQVVGIPDSKYGEEVAA 499
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+L + DQ+ L++E L ++C+ + + FK PR F + FP+T
Sbjct: 500 WVKL---------HPDQA-------LTAEALAEYCKGR-IAHFKVPRHFRFVEE-FPMTV 541
Query: 311 TGKIRRDEVRREVMSHL 327
TGK+++ +R + + L
Sbjct: 542 TGKVQKFRMRELMQAEL 558
>gi|119964094|ref|YP_948746.1| long chain fatty acid-CoA ligase [Arthrobacter aurescens TC1]
gi|119950953|gb|ABM09864.1| putative long chain fatty acid-CoA ligase [Arthrobacter aurescens
TC1]
Length = 558
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 148/318 (46%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F + +ALEAV+ TSL VP + +A L +++ + G P E+M+
Sbjct: 278 FNASAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT TLE + V
Sbjct: 336 RVIDEMHMVDVAICYGMTETSPVST-MTRAGDTLEQ-------------------RTSTV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E ++ GS V G + TRG VM YW Q E W+ TGD
Sbjct: 376 GRTMPHLESRIIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGD 435
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR + GGEN+YP E+E L HP I + V+G+ + + E ++
Sbjct: 436 LARMDEDGYLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELM 495
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ L K L++E L ++CR K L +K PR +V R+ FP+T
Sbjct: 496 ACIIL---------------KPGSPALTAEELAEYCRGK-LAHYKIPR-YVDVRESFPMT 538
Query: 310 STGKIRRDEVRREVMSHL 327
+GK+R+ ++R+E +S L
Sbjct: 539 VSGKVRKVDMRQEAVSRL 556
>gi|68536632|ref|YP_251337.1| AMP-binding protein [Corynebacterium jeikeium K411]
gi|68264231|emb|CAI37719.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 564
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 46/323 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F +S LEAVE TSL VP + MA+L + K K D S++ + G P
Sbjct: 274 PVFNPQSVLEAVEHGKATSLFGVPTMFMAELDEIEHAKAKGKTYDLSSLRTGIMSGTACP 333
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
+ M++ + ++ AYGMTETS + TL D +E + G
Sbjct: 334 TRTMRQVMDIMNINEITIAYGMTETSP-VNHQTLVDDPIE------KRVG---------- 376
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG+P PH+E+K+ + G IL RG VM YWD + W
Sbjct: 377 ---TVGRPNPHIEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGW 433
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ +GD+G++D+ G + GR + GGEN+YP E+E L+ HP I + VVG+ + +
Sbjct: 434 MHSGDLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKY 493
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++A + +RE + DQ++ +R C + LT K P+ +V +
Sbjct: 494 GEELMAFIIMREDTE----PLDQAA-----------VRDFC-DGELTRHKIPK-YVECVE 536
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
FP+T +GK+R+ E+R + L
Sbjct: 537 SFPMTLSGKVRKVELREHAVELL 559
>gi|363422556|ref|ZP_09310631.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
gi|359732854|gb|EHK81861.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
Length = 555
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 151/322 (46%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV + TSL VP + +A L S++ + G P E+
Sbjct: 266 PGFDPAATLGAVAEEKCTSLYGVPTMF--IAELADPGFDNYDLSSLRTGIMAGSPCPVEV 323
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ + +++ YGMTETS ++ T D ++E +
Sbjct: 324 MKQVIDRMGMSEVSICYGMTETSP-VSTQTRSDDSIER-------------------RVS 363
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + G + TRG VML YWDQ W+ T
Sbjct: 364 TVGRVGPHLEVKVVDPVTGLTVPRGEPGELCTRGYSVMLGYWDQPDKTAEAIDAARWMHT 423
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D+ G V + GR + GGEN+YP E+E L HP I+ VVG+ + + E
Sbjct: 424 GDIGVMDEDGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVPDTKYGEE 483
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A +R+RE + L ++ LR C K L +K PR +V + FP
Sbjct: 484 LMAWIRMREGAE---------------PLDADSLRTFCTGK-LAHYKIPR-YVHVVEEFP 526
Query: 308 LTSTGKIRRDEVRREVMSHLKS 329
+T TGK+R+ E+R + ++ L++
Sbjct: 527 MTVTGKVRKVEMREQAIALLEA 548
>gi|453072992|ref|ZP_21976005.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452756762|gb|EME15170.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 503
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 45/325 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA +VG VF +F++ L + VT++ +P+++ L T SVK
Sbjct: 215 MAQTVVGGTVVFANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVK 272
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ G +P+ +++ A + FP A + YGMTET+ ++ + G +A G
Sbjct: 273 SIVYGAAPMPAAILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG 322
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
P+ G+ + H E+ + + V G I+TRG H+ML YW++
Sbjct: 323 ---------PRLRSAGRASLHAEIIIADREGNEVPRGTVGEIVTRGEHIMLGYWNRPEET 373
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
G WL TGD+ +DD G +++V R I +GGENVY EVE + HP ++
Sbjct: 374 AEALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCA 432
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ +A+ E V A V L N +L ++E +R+H + + + G+KA
Sbjct: 433 VIGLPDAQWGERVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKA 475
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V + + T+TGK + +R
Sbjct: 476 PRT-VAFVEALTTTATGKTDKRSLR 499
>gi|152988530|ref|YP_001348039.1| AMP-binding protein [Pseudomonas aeruginosa PA7]
gi|150963688|gb|ABR85713.1| acyl-CoA synthase [Pseudomonas aeruginosa PA7]
Length = 561
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 148/323 (45%), Gaps = 45/323 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ + A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIDEMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLALMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + + E LR C+E+ + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHRADD----------------EQLRAFCKER-IAHFKVPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSLP 331
T TGKI++ +R + ++ LP
Sbjct: 536 TVTGKIQKFRMREVSIQEVRLLP 558
>gi|229491800|ref|ZP_04385621.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229321481|gb|EEN87281.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 503
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 45/325 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA +VG VF +F++ L + VT++ +P+++ L T SVK
Sbjct: 215 MAQTVVGGTVVFANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVK 272
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ G +P+ +++ A + FP A + YGMTET+ ++ + G +A G
Sbjct: 273 SIVYGAAPMPAAILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG 322
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
P+ G+ + H E+ + + V G I+TRG H+ML YW++
Sbjct: 323 ---------PRLRSAGRASLHAEIIIVDREGNEVPRGTVGEIVTRGEHIMLGYWNRPEET 373
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
G WL TGD+ +DD G +++V R I +GGENVY EVE + HP ++
Sbjct: 374 AEALRGG-WLHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCA 432
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ +A+ E V A V L N +L ++E +R+H + + + G+KA
Sbjct: 433 VIGLPDAQWGERVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKA 475
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V + + T+TGK + +R
Sbjct: 476 PRT-VAFVEALTTTATGKTDKRSLR 499
>gi|389862540|ref|YP_006364780.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
gi|388484743|emb|CCH86283.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
Length = 551
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 146/320 (45%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L+AV+ TSL VP + +A L + S++ + G P E+
Sbjct: 260 PGFDPAATLQAVQDERCTSLYGVPTMF--IAELALPGFSSYDLSSLRTGIMAGSPCPVEV 317
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + ++ YGMTETS T T D L+ +
Sbjct: 318 MKRVVDEMGMTEVTICYGMTETSPVST-QTGADDDLDR-------------------RTS 357
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E KV + G + TRG VML YWD+ V W+ T
Sbjct: 358 TVGRTHPHLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWDEPEKTAEVLDAARWMHT 417
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D+ G + +VGR + GGENVYP EVE L HP I+ V+G+ + R E
Sbjct: 418 GDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREVEEFLYTHPDIVDAQVIGVPDERYGEE 477
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V+LRE + L++E LR C K L FK PR +V FP
Sbjct: 478 LMAWVQLREGAE---------------PLTAEALRAFCAGK-LAHFKVPR-YVKVVDGFP 520
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ E+R ++ L
Sbjct: 521 MTVTGKVRKVEMREVSVTEL 540
>gi|412992139|emb|CCO19852.1| AMP-dependent synthetase and ligase [Bathycoccus prasinos]
Length = 783
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 171/371 (46%), Gaps = 55/371 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR------------ 48
+A + A HVF+ F+++S L+A+ VT+ I VP ++ L + +
Sbjct: 413 LAAIKADARHVFLESFDARSFLQAIVTAEVTAFIAVPTMLRKLERMCKDAHLIPRPTTIS 472
Query: 49 --VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 106
V+ +SVKKIL GGG + + + A FP AK+IS YGMTE +SS+ + L D
Sbjct: 473 STVQSNPSTFNSVKKILVGGGPMHEKDVAFARKIFPNAKIISTYGMTEATSSIAYADLTD 532
Query: 107 PTL-----ETPGQLPQAFGN---VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRIL 158
+ T + G+ VT NS V GK + +K+ D IL
Sbjct: 533 IEMTPLGSRTASASDMSLGDNWVVTANS-----NVNQGKIIEGLSVKI--DRLGQENEIL 585
Query: 159 TRGAHVMLRYWDQFLAK----PSVSTGEVWLDTGDIGSID-DGGNVWLVGRRNGRIKSGG 213
RG V Y++ +A + TGDIG + D V ++GR + IK+GG
Sbjct: 586 IRGETVSKGYYNTPVAHSLHVDDKYNNNGYFRTGDIGEVSKDSNTVRILGRLSNAIKTGG 645
Query: 214 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR---------------ESW 258
ENV EVE V+ +H + VV G+ + E+V VRL+ ++W
Sbjct: 646 ENVSCLEVEQVVEKHELVQESVVYGVPDDVWGEIVTCAVRLKPDVEWAQPTENLNNPDAW 705
Query: 259 QWSESNCDQSSKNKELLLSS------EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 312
++ + + + + LSS E+LR C +K L FK P+ +V+ FP S G
Sbjct: 706 EFMKYAEEHMDDHMDGQLSSLKKVNGEMLRHWCLKKQLARFKVPKQWVVVENEFPRNSGG 765
Query: 313 KIRRDEVRREV 323
KI ++RRE+
Sbjct: 766 KIDLSQLRREI 776
>gi|429505407|ref|YP_007186591.1| AMP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429486997|gb|AFZ90921.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 546
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 156/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 251 LACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 309 TGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKNQEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 409 TEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A +RL++ Q++ S+E +R C+E ++ +K
Sbjct: 469 QVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +VL+ +P+ +GKI++ ++R + + LK
Sbjct: 512 VPR-YVLFTDEYPMAVSGKIQKFKLREKTIEELK 544
>gi|327399671|ref|YP_004340540.1| long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
gi|327182300|gb|AEA34481.1| Long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
Length = 564
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 150/312 (48%), Gaps = 46/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +++ LEAVE+ T+L VP + +A L + S++ + G P E+MK
Sbjct: 276 FNAEATLEAVEKEKCTALHGVPTMF--IAELEHPRFKEFDLTSLRTGIMAGSPCPVEVMK 333
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ AYG TE S +T TL D TLE H+ + V
Sbjct: 334 RVNKEMHMEQVEIAYGQTEASPVIT-QTLADDTLE-----------------HRTE--TV 373
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+P P++E+K+ + + + G + RG +VM Y++ A + WL TGD
Sbjct: 374 GRPLPYIEVKIVNPETGEILPVGEQGELCARGYNVMKYYYNNPQATKEAIDEDGWLHTGD 433
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + GR I GG+N+YP E+E L HP + + V+G+ + + E V
Sbjct: 434 LATMDEDGYFKITGRIKDMIIRGGQNIYPREIEEFLYTHPKVADVQVIGVPDKKYGEEVC 493
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A VRL+E +E E ++++C+ K + +K PR ++ + FP+T
Sbjct: 494 AWVRLKEGETATE----------------EEIKEYCQGK-IAHYKIPR-YIKFTDSFPMT 535
Query: 310 STGKIRRDEVRR 321
TGKIR+ E+R
Sbjct: 536 VTGKIRKVEMRE 547
>gi|418047004|ref|ZP_12685092.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353192674|gb|EHB58178.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 519
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 151/332 (45%), Gaps = 59/332 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G HVF+P F LEA+ +H +T L+ VP ++ L + S++
Sbjct: 223 LAQVSRGGTHVFVPAFRPDWVLEALHEHRITDLLLVPTMVQMLVDHPSLSD--HDTSSLR 280
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQ 117
++ GG + + L++ A P A + AYGMTE S T ++ +DP L G
Sbjct: 281 MVMYGGSPIAAALLERAAARLPTASFVQAYGMTEVSPVATLLSPQDHHDPVLRRSG---- 336
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQF 172
G+ APH E+++ D + VG I+ RG HVM YW
Sbjct: 337 ------------------GQAAPHSEVRIVGDDDTELPRGEVGEIVVRGGHVMAGYW--- 375
Query: 173 LAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + W+ TGD G +D+ G +++V R I SGGENVY EVE L +HP
Sbjct: 376 -GKPEETAAALRSGWMHTGDAGYMDERGYIFVVDRLKDMIVSGGENVYSVEVENALARHP 434
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ V+GI + R E V A V Q + + E LR+ C K+
Sbjct: 435 AVATCAVIGIPDDRWGERVHAVVVF---------AAGQRADHDE-------LREFC--KS 476
Query: 290 LTG-FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
L G +K PR F P ++ GK+ + E+R
Sbjct: 477 LIGTYKVPRSFEA-VDALPTSAAGKVLKRELR 507
>gi|326775763|ref|ZP_08235028.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
gi|326656096|gb|EGE40942.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
Length = 535
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 150/325 (46%), Gaps = 54/325 (16%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 63
GAC V P FE + L AV+Q TSL VP + L + G D S++ +
Sbjct: 249 GACIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRTGI 304
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P+E+MK A++ YGMTETS T T D LE
Sbjct: 305 MAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSPVST-QTRRDDDLER------------ 351
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS--------DGSSHVGRILTRGAHVMLRYWDQFLAK 175
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -------RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRT 402
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP + +
Sbjct: 403 ADVVDAGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQ 462
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ + R E ++ACV R+ D + ++ + +CRE+ L +K
Sbjct: 463 VVGVPDERYGEEILACVIPRDP-------ADPPTLDE--------IFAYCRER-LAHYKI 506
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR + + FP+T +GK+R+ E+R
Sbjct: 507 PRRLRIL-ETFPMTVSGKVRKVELR 530
>gi|260577833|ref|ZP_05845767.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258604060|gb|EEW17303.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 564
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 46/323 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F +S LEAVE TSL VP + MA+L + K K D S++ + G P
Sbjct: 274 PVFNPQSVLEAVEHGKATSLYGVPTMFMAELDEIEHAKAKGKTYDLSSLRTGIMSGTACP 333
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
+ M++ + ++ AYGMTETS + TL D +E + G
Sbjct: 334 TRTMRQVMDIMNINEITIAYGMTETSP-VNHQTLVDDPIE------KRVG---------- 376
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG+P PH+E+K+ + G IL RG VM YWD + W
Sbjct: 377 ---TVGRPNPHIEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTADAIDEDGW 433
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ +GD+G++D+ G + GR + GGEN+YP E+E L+ HP I + VVG+ + +
Sbjct: 434 MHSGDLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQVVGVPDEKY 493
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++A + +RE + DQ++ +R+ C +LT K P+ +V
Sbjct: 494 GEELMAFIIMREDAE----PLDQAA-----------VREFC-AGDLTRHKIPK-YVECVD 536
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
FP+T +GK+R+ E+R + L
Sbjct: 537 SFPMTLSGKVRKVELREHAVELL 559
>gi|326381896|ref|ZP_08203589.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
gi|326199322|gb|EGD56503.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
Length = 509
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 151/327 (46%), Gaps = 45/327 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+++G HV +P F+ ++ + +H VT + VP +M L VK D + I+
Sbjct: 221 MLLGGSHVMLPTFDPETVCRTIGEHQVTDALLVPTMMQILVDDPHVKDYPT--DCLANIM 278
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G + L+ +FP A L AYGMTE S T L D + P + A
Sbjct: 279 YGASPISEALLARTRAAFPSAALNQAYGMTELSPVATL--LRDEDHDHPVRRRSA----- 331
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
G+ APH ++V DG+ VG I+ G HVML YW++ + +
Sbjct: 332 ------------GQAAPHALVRVVDPDGADLPTGSVGEIVCAGDHVMLGYWNR-PEETAA 378
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + W+ TGD G +D+ G V++V R I +GGENVY EVE + +HP + V+G
Sbjct: 379 ALRDGWMHTGDGGYLDEDGYVYVVDRIKDMIITGGENVYSVEVENAIAKHPAVAQCAVIG 438
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + R E V A V L L+ + L H RE ++ G+K PR
Sbjct: 439 IPDDRWGERVHAVVGLMPGQT----------------LTLDELADHVRE-HIAGYKVPRS 481
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ + FP++ GKI + E+R + S
Sbjct: 482 MSVVEQ-FPMSGAGKILKRELRIQFAS 507
>gi|254426993|ref|ZP_05040700.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
gi|196193162|gb|EDX88121.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
Length = 516
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 151/330 (45%), Gaps = 53/330 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + H +P+F+ L +EQ VT+ + VP ++ LA+ R+ S+K
Sbjct: 218 FAVTLAAGTHGIVPRFDVDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQA 118
++L G +P ++ A P YG TE S +T + P PG +L A
Sbjct: 276 RMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHIPGGEKLRSA 332
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD- 170
G+ A VE+ +V S G+ VG I RG +VML YW
Sbjct: 333 -----------------GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGM 373
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ ++ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP
Sbjct: 374 ESTTADTLRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPA 431
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ V+GI + R E V A V LRE SE+ + +HCRE+ +
Sbjct: 432 VQECAVIGIPDERWGEAVHAIVVLREGEHASEAE----------------IIEHCRER-I 474
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+K PR + P++ GK+ ++E+R
Sbjct: 475 AGYKVPRSVDFKAESLPVSGAGKVLKNELR 504
>gi|326384443|ref|ZP_08206123.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196788|gb|EGD53982.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 505
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 61/327 (18%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILN 64
G +P+F++++AL+ +E+ VT VP + LA + GRD S++ ++
Sbjct: 227 GGSVALLPRFDAQAALDVIERRRVTVFSGVPTMYVALA-----EADTSGRDLSSLRTAIS 281
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
GG +P E+++ FP ++ YG++ET+S+ TF N+
Sbjct: 282 GGASIPGEVIRAVEAKFPGVVVLEGYGLSETASTSTF-------------------NI-- 320
Query: 125 NSVHQPQGVCVGKPAPHVELKVC-------SDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
S + + + +GKP VE+ V + G VG+++ RG +VM Y+ +P
Sbjct: 321 -SATERKVLSIGKPVWGVEMAVLDGDGTPMAAGPDQVGQLVVRGHNVMKGYYK----RPD 375
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+G D+ G ++V R I GG NVYP E+E VL HP ++
Sbjct: 376 ATAEALRNGWLHTGDLGYRDEDGYYFVVDRLKDLIVRGGYNVYPREIEEVLYTHPEVVEA 435
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ + RL E VVA V LR + S EL+ S ++ L +K
Sbjct: 436 AVIGVPDDRLGEEVVAYVALR---------AEASVTPDELIAFS--------KEQLAAYK 478
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR V P +TGKI + E+RR
Sbjct: 479 YPRA-VEIVDALPKGATGKILKRELRR 504
>gi|138894562|ref|YP_001125015.1| long-chain fatty acid CoA ligase (AMP-binding) [Geobacillus
thermodenitrificans NG80-2]
gi|134266075|gb|ABO66270.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
Length = 539
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ--YGISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPMELMRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + +V+
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
+ E V A + L++ Q +E + + +HCR KNL +K PR+ V
Sbjct: 472 SYRGETVKAVIVLKDGQQANEDD----------------IIRHCR-KNLASYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRTELPKTNVGKILRRALREE 534
>gi|153839677|ref|ZP_01992344.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149746805|gb|EDM57793.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 513
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 159/330 (48%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 230 ASVQSGATLVLVPRFEPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|403340800|gb|EJY69695.1| Long-chain-fatty-acid--CoA ligase [Oxytricha trifallax]
Length = 542
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 45/328 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ + GA V+ + F+ K+ +EA+ Q+ TS+ VP + + K ++
Sbjct: 230 LCAINFGATMVYPSEGFDPKATMEAITQYQGTSMYGVPTMFIAMLEEYAKNKEKYNISTL 289
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ G G+P L+ T+ F +L YG TE S +T T DP +
Sbjct: 290 RTGFISGSGVPEVLVNRITSEFGLHELTHGYGQTECSPVVTMSTANDPLAK--------- 340
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ VGK PH+ELK+ + S G + RG VM Y++
Sbjct: 341 -----------KAKTVGKTLPHIELKIINPESGETMKWGEPGEVCARGYVVMTGYFNDAK 389
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W+ TGD+G DD G + ++GR I GGEN+YP+E+E ++HP +
Sbjct: 390 RTQEAVCPKGWIRTGDLGQFDDDGFLKIIGRSKDMIIRGGENIYPKEIEEYFMKHPNVSD 449
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+++ + E V A ++L+ES + + +E L +C+ + ++ +
Sbjct: 450 VQVVGVSDELMGEEVCAWIKLKESGKTTP---------QEFL-------DYCKGQ-ISHY 492
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
K PR ++ FPLT TGK++++E+R
Sbjct: 493 KIPR-YIRIVDSFPLTVTGKVKKNEMRH 519
>gi|451972653|ref|ZP_21925858.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
gi|451931469|gb|EMD79158.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
Length = 513
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 230 ASVLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 286 AISGGAPLPTEIFRSFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV +G++ G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I
Sbjct: 379 EVTESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI N E + A V L+ + +E L++ +E+ L F
Sbjct: 439 VAVIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR +V R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|338999710|ref|ZP_08638348.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338763390|gb|EGP18384.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 567
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 145/312 (46%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L S++ + G P+E+MK
Sbjct: 283 FDPGKVLKAVHEQKATALYGVPTMF--IAELEHPDFATTDFSSLRTGIMAGSICPAEIMK 340
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + AYGMTETS T N + + V
Sbjct: 341 QVIEKMNMKGVQIAYGMTETSPVST--------------------QTGANDTIEKRVSTV 380
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +G + TRG VML+YW+ A W+ TGD
Sbjct: 381 GRTQPHLESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATTEAIDEAGWMHTGD 440
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E ++
Sbjct: 441 LATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEELI 500
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L + S D ++ E LR++C+ K +T FK PR F + FP+T
Sbjct: 501 AWVKL------NSSAGD---------VTGEDLREYCKGK-ITHFKIPRYFKFVDE-FPMT 543
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 544 VTGKIQKFKMRE 555
>gi|324997477|ref|ZP_08118589.1| AMP-binding domain protein [Pseudonocardia sp. P1]
Length = 571
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 143/313 (45%), Gaps = 45/313 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ K+ L+AVEQ TSL VP + +A L S++ + G P E+MK
Sbjct: 282 FDPKATLKAVEQERCTSLYGVPTMF--IAELNDPDFASYDLSSLRTGIMAGSPCPVEVMK 339
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ YGMTETS T T D +L+ + V
Sbjct: 340 QVVERMGMTEVTICYGMTETSPVST-QTRADDSLDL-------------------RVSTV 379
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+KV + G + TRG VML YWDQ V W+ TGD
Sbjct: 380 GRVHPHLEVKVVDPETGKTLPRGEAGELCTRGYSVMLGYWDQPEKTAEVIDRARWMHTGD 439
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
I +DD G V + GR + GGENVYP E+E L HP ++ V+G+ +AR E +
Sbjct: 440 IAVMDDEGYVNITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDARYGEELC 499
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V LRE ++ E L++ + L +K PR +VL FP+T
Sbjct: 500 AWVVLREG---------------AAAMTPESLKEFATGR-LAHYKIPR-YVLVVDEFPMT 542
Query: 310 STGKIRRDEVRRE 322
TGK+R+ E+R +
Sbjct: 543 VTGKVRKVEMREK 555
>gi|182435126|ref|YP_001822845.1| AMP-binding protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463642|dbj|BAG18162.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 535
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 151/325 (46%), Gaps = 54/325 (16%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKIL 63
GAC V P FE + L AV+Q TSL VP + L + G D S++ +
Sbjct: 249 GACIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRTGI 304
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 305 MAGSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER------------ 351
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAK 175
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -------RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRT 402
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP + +
Sbjct: 403 ADVVDPGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQ 462
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ + R E ++ACV R+ D + ++ + +CRE+ L +K
Sbjct: 463 VVGVPDERYGEEILACVIPRDP-------ADPPTLDE--------ISAYCRER-LAHYKI 506
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR + + FP+T +GK+R+ E+R
Sbjct: 507 PRRLRIL-ETFPMTVSGKVRKVELR 530
>gi|302541757|ref|ZP_07294099.1| substrate-CoA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302459375|gb|EFL22468.1| substrate-CoA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 566
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 145/334 (43%), Gaps = 46/334 (13%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AVEQ TSL VP + +A L S++ +
Sbjct: 260 GACIVIPAPAFDPAATLSAVEQERCTSLYGVPTMF--IAELALPDFATFDLTSLRTGIMA 317
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+M+ A++ YGMTETS T D G
Sbjct: 318 GSPCPVEVMRRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLARRTGT----------- 366
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ P+VE+KV + G + TRG VML YW++
Sbjct: 367 ---------VGRVLPYVEVKVMDPATGLTVPRGTRGELCTRGYSVMLGYWEEPDLTAEAI 417
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D+ G V +VGR I GGENVYP E+E L HP I + VVG+
Sbjct: 418 DPAGWMHTGDLAVMDEHGYVQIVGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQVVGV 477
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++ACV LRE L+ + L + CR + L FK PR
Sbjct: 478 PDEKYGEEILACVILREG---------------ATALTRDELARFCRGR-LAAFKVPRHL 521
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
+ FP+T +GK+R+ E+R L +P +
Sbjct: 522 RVM-DAFPMTVSGKVRKVELRETGARELAGVPES 554
>gi|399545625|ref|YP_006558933.1| acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
gi|399160957|gb|AFP31520.1| Putative acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
Length = 543
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 148/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE K+ L+AV Q T+L VP + +A L + +++ + G P+E+M+
Sbjct: 261 FEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFEIYDLSTLRTGIMAGSICPAEVMR 318
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 319 KVNGKMNMKEVQIAYGMTETSPVSTQTSSQDP--------------------FEKQVTTV 358
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ + ++ G + TRG VML+YW+ W+ TGD
Sbjct: 359 GRTQPHLENKIVEPANGNIVARGTIGELCTRGYSVMLKYWNNDEKTRETIDDAGWMHTGD 418
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGEN+YP+EVE L HP I + V GI N + E +V
Sbjct: 419 LATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGIPNEKFGEELV 478
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR D S + + L++ C+ K + +K PR + + + FP+T
Sbjct: 479 AWVKLRP---------DADSVDADDLIA------FCKGK-IAHYKIPRNY-KFVEAFPMT 521
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 522 VTGKIQKFKMRE 533
>gi|456014381|gb|EMF47996.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 563
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 159/339 (46%), Gaps = 57/339 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M+G V +PKF+ ++AL+ + + T P + L + + K S++ +
Sbjct: 272 VMLGNKMVLLPKFDPETALKTINKQKPTLFPGAPTLYIGLMSHPDIAKY--DLSSIEACM 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP+E+ +E + KL+ YG+TETS +T L +G
Sbjct: 330 SGSAPLPAEV-QEKFEALTGGKLVEGYGLTETSP-VTHSNL-------------VWGERI 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 177
SV G P P + K+ G++ +G I +G VM YW+ KP
Sbjct: 375 KGSV--------GIPYPDTDCKIFQTGTTIPIPNGEIGEIAIQGPQVMKGYWN----KPE 422
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+G +DD G+ ++V R+ I +GG N+YP E+E VL +H +
Sbjct: 423 ETAATIVDGWLLTGDLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAVQEC 482
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV GI + E V A + L+E + +E E L +CRE+ L FK
Sbjct: 483 VVAGIPDPYRGETVKAYIVLKEGYTVTE----------------EELNAYCREQ-LASFK 525
Query: 295 APRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKSLPS 332
PR++ +RK P T+ GKI RR V EV +++PS
Sbjct: 526 VPRVYE-FRKELPKTAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|374985715|ref|YP_004961210.1| AMP-binding protein [Streptomyces bingchenggensis BCW-1]
gi|297156367|gb|ADI06079.1| AMP-binding domain protein [Streptomyces bingchenggensis BCW-1]
Length = 575
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 147/322 (45%), Gaps = 46/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AVEQ TSL VP + +A L S++ +
Sbjct: 266 GACIVIPAPTFDPAATLRAVEQERCTSLYGVPTMF--IAELGLPDFDSYDLSSLRTGIIA 323
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+++ + A++ YGMTETS T D G
Sbjct: 324 GSTCPVEVLRRVVDEMHMAEVSIFYGMTETSPVSTQTRRDDDLRHRTGT----------- 372
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E+KV + G + TRG VML YW++ V
Sbjct: 373 ---------VGRVLPHLEIKVVDPLTGVTVPRGTRGELCTRGYSVMLGYWEEPERTAEVI 423
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W+ TGD+ +D+ G V +VGR I GGE VYP E+E L HP I + VVG+
Sbjct: 424 DGGRWMHTGDLAIMDEDGYVRIVGRIKDMIIRGGEKVYPREIEEFLYTHPKIADVQVVGV 483
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++ACV LRE + L+ + L + CR + L +KAPR +
Sbjct: 484 PDEKYGEEILACVILREGAKS---------------LTRDELARFCRGR-LAHYKAPR-Y 526
Query: 300 VLWRKPFPLTSTGKIRRDEVRR 321
+ FP+T +GK+R+ E+R+
Sbjct: 527 LRVMDAFPMTVSGKVRKVELRQ 548
>gi|183983827|ref|YP_001852118.1| AMP-binding protein [Mycobacterium marinum M]
gi|183177153|gb|ACC42263.1| fatty-acid-CoA ligase FadD35 [Mycobacterium marinum M]
Length = 547
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 149/335 (44%), Gaps = 58/335 (17%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI------MADLATLIRVKKTWKGRDSV 59
GAC V P F+ + L AV+ TSL VP + +AD AT S+
Sbjct: 255 GACMVIPAPGFDPAATLRAVQAERCTSLYGVPTMFIAELGLADFATY--------DLSSL 306
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M++ + A + YGMTETS T
Sbjct: 307 RTGIMAGSTCPVEVMRKVIDQMHMAGISICYGMTETSPVAT------------------- 347
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
N Q + VG+ PH+E+KV + + G TRG VM YW
Sbjct: 348 -QTRSNDSLQRRVTTVGRVGPHLEIKVVDPATGRIVPRGTAGEFCTRGYSVMSGYWKAPE 406
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V E W+ TGD+ +D+ G V + GR + GGEN+ P E+E L HP I+
Sbjct: 407 RTAEVIDPEGWMHTGDLALMDECGYVQITGRIKDIVVRGGENISPREIEEFLHSHPDIVD 466
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + R+ E ++A V+LR L++ +LR++C + F
Sbjct: 467 AHVVGVPDERMGEELMAVVKLRAGAPE---------------LTTGLLREYC-AGQIAKF 510
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR L + FP+T TGK+R+ E+R++ + +L+
Sbjct: 511 KIPRYLRLVDE-FPMTVTGKVRKVEMRQQAIEYLR 544
>gi|407647404|ref|YP_006811163.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
gi|407310288|gb|AFU04189.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
Length = 541
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 144/326 (44%), Gaps = 46/326 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AVE TSL VP + +A L + S++ + G P E+
Sbjct: 255 PAFDPVATLAAVEAERCTSLYGVPTMF--IALLTELDSATPDLSSLRTGIMAGSPCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + ++ YGMTETS T T D ++ +
Sbjct: 313 MKRVIDRMGMHEVCICYGMTETSPVST-QTRRDDGIDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW W+ T
Sbjct: 353 TVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWSDPGKTAEAIDAARWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +DD G + + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 413 GDIGVMDDDGYLAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VR+RE L + +R+ C K L FK PR +V FP
Sbjct: 473 LMAWVRMREG---------------AAPLDATSVREFCTGK-LAHFKIPR-YVHVVDEFP 515
Query: 308 LTSTGKIRRDEVRREVMSHLKSLPSN 333
+T TGKIR+ E+ RE+ L +LP
Sbjct: 516 MTVTGKIRKAEM-RELSRALLALPDQ 540
>gi|359397207|ref|ZP_09190257.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
gi|357969001|gb|EHJ91450.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
Length = 579
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV T+L VP + +A L S++ + G P+E+MK
Sbjct: 283 FDPGKVLKAVHDQKATALYGVPTMF--IAELDHPDFPSTDLSSLRTGIMAGSICPAEIMK 340
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N + AYGMTETS T N + + V
Sbjct: 341 QVINKMNMKGVQIAYGMTETSPVST--------------------QTGANDSIEKRVSTV 380
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +G + TRG VML+YW+ A W+ TGD
Sbjct: 381 GRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATTEAIDEAGWMHTGD 440
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E ++
Sbjct: 441 LATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEELI 500
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L +S E ++ E LR++C+ K +T FK PR F + FP+T
Sbjct: 501 AWVKL-------------NSTAGE--VTGEELREYCKGK-ITHFKIPRYFKFVDE-FPMT 543
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 544 VTGKIQKFKMRE 555
>gi|269967038|ref|ZP_06181106.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
gi|269828297|gb|EEZ82563.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
Length = 538
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 160/330 (48%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ GA V +P+FE K LE VE+H VT VP + L + V+ + S++
Sbjct: 255 ASVLGGATLVLVPRFEPKHVLELVEKHRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRV 310
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ + +F ++ YG++ETS F L + PG
Sbjct: 311 AVSGGAPLPTEIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG-------- 359
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV +G++ G I+ RG +VM Y D +P
Sbjct: 360 ------------SVGQPVQGVEVKVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RP 403
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP +
Sbjct: 404 EVTESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSM 463
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI N E + A V L K KE + ++ L++ +E+ L F
Sbjct: 464 VAVIGIPNEEYGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASF 506
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR +V R+ P+++TGKI + E++ E+
Sbjct: 507 KYPR-YVEIREHLPMSATGKILKRELKSEL 535
>gi|126667842|ref|ZP_01738808.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627658|gb|EAZ98289.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 543
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE K+ L+AV Q T+L VP + +A L + +++ + G P+E+MK
Sbjct: 261 FEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFETYDLSTLRTGIMAGSICPAEVMK 318
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + Q V
Sbjct: 319 KVNGKMNMKEVQIAYGMTETSPVSTQTSAQDP--------------------FEKQVTTV 358
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ S ++ G + TRG VML+YW+ W+ TGD
Sbjct: 359 GRTQPHLESKIVEPASGNIVPRGEIGELCTRGYSVMLKYWNNAEKTRETIDDAGWMHTGD 418
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGEN+YP+EVE L HP I + V G+ + + E +V
Sbjct: 419 LATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPSIEEVQVTGVPDEKFGEELV 478
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR D S + + L++ C+ + + +K PR + + + FP+T
Sbjct: 479 AWVKLRP---------DADSVDADDLIA------FCKGQ-IAHYKIPRNY-KFVEAFPMT 521
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 522 VTGKIQKFKMRE 533
>gi|257057367|ref|YP_003135199.1| AMP-binding domain-containing protein [Saccharomonospora viridis
DSM 43017]
gi|256587239|gb|ACU98372.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora viridis DSM 43017]
Length = 552
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 152/335 (45%), Gaps = 48/335 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC V P F+ L AV+ TSL VP + +A L S+
Sbjct: 247 LAATTHGACMVIPAPSFDPAKTLAAVQAERCTSLYGVPTMF--IAELAEPDFDSYDLSSL 304
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK+ ++ YGMTETS ++ T D ++E
Sbjct: 305 RTGIMAGSPCPVEVMKQVIERMGMTEVSICYGMTETSP-VSMQTRVDDSIER-------- 355
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-------SHVGRILTRGAHVMLRYWDQF 172
+ VG+ PH+E K+ + +H G + TRG VML YW+Q
Sbjct: 356 -----------RVSTVGRVGPHLEAKIIDPETGLTVPRGTH-GELCTRGYSVMLGYWEQP 403
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
V W+ TGD+ +D+ G V + GR + GEN+YP E+E L HP I+
Sbjct: 404 DKTAEVIDEARWMHTGDLAVMDEDGYVNITGRLKDMVIRDGENIYPREIEEFLYTHPDIL 463
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ + R E ++A VR+RE + L++E LR+ C K L
Sbjct: 464 DAQVIGVPDERYGEELMAWVRMREGAE---------------PLTAESLREFCTGK-LAH 507
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K PR +V FP+T TGK+R+ E+R+ + L
Sbjct: 508 YKIPR-YVHVVDEFPMTVTGKVRKVEMRKRAVELL 541
>gi|103487349|ref|YP_616910.1| long-chain-fatty-acid--CoA ligase [Sphingopyxis alaskensis RB2256]
gi|98977426|gb|ABF53577.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis
RB2256]
Length = 519
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 51/326 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + + +F + +AVEQH VT VPA + L L+ + T +K IL
Sbjct: 224 LAAGLPGIVLAEFNPEGVFDAVEQHGVTRFFMVPAALQML--LMHPRCTSVDYSRLKYIL 281
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL+++ F A+ I AYGMTET+ +++ +
Sbjct: 282 YGAAPIPLELLRQCIQVF-GAQFIQAYGMTETTGTISML--------------------- 319
Query: 124 PNSVHQPQG----VCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLA 174
P H P G GK P VE++V +DG + VG ++TR ++ ML YW+ A
Sbjct: 320 PPEDHDPAGNKRMRSAGKALPGVEIRVVDADGNPLPTGEVGEVVTRSSNNMLGYWNLPDA 379
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ T + W+ TGD G +D+ G +++ R I +GGENVYP EVE+ + HP + +
Sbjct: 380 TANTMTDDGWIRTGDAGYLDEDGYLFIHDRMKDMIITGGENVYPAEVESAIFGHPAVQEV 439
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI +A+ E V A V + + E++ + RE+ + FK
Sbjct: 440 AVIGIPDAKWGESVKAVVVAKPGARIEEAD----------------IIAWARER-IAPFK 482
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR + P ++GKI R ++R
Sbjct: 483 CPRSIDV-IDALPRNASGKILRKDLR 507
>gi|357021292|ref|ZP_09083523.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
gi|356479040|gb|EHI12177.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
Length = 499
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 151/334 (45%), Gaps = 55/334 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA +V +P+F + ++A +H T+ VP + +A ++ + + R ++++
Sbjct: 209 LVKGARNVILPRFTPQGFVDAAVEHGATATFMVPTM---IAMMLEDAEIDRDRLKLRRLC 265
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG + L+ + + YG E ++T + P TP +L A
Sbjct: 266 YGGAPIAPTLLARGLETLGPV-FVQLYGQAEAPLAITCL---QPWEHTPERLTSA----- 316
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
GKP VE+ + + + V G ++TRG H M YW + A
Sbjct: 317 ------------GKPYTFVEMDIRDEEDNSVPPGTPGEVVTRGPHTMSGYWRRPEATAET 364
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG +D+ G ++L+ RRN I SGG NVYP EVE LL HP + VVVG
Sbjct: 365 LGEDGWLRTGDIGQVDEEGYLYLLDRRNDVIISGGFNVYPREVEDALLTHPAVREAVVVG 424
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R + V A V LRE + ++ L HC E+ L GFK PR
Sbjct: 425 VDDERWGQRVSAAVVLREE------------------VDTQALIDHCAER-LAGFKRPRH 465
Query: 299 FVLWRKPFPLTSTGKIRRDEVR------REVMSH 326
+W + P + GK R VR EV +H
Sbjct: 466 IEVWDE-LPKSPVGKSLRRTVRETMRANEEVTAH 498
>gi|453075501|ref|ZP_21978287.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
gi|452762927|gb|EME21214.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
Length = 561
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 143/313 (45%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ K+ L+AV+ TSL VP + +A L S++ + G P E+
Sbjct: 278 PAFDPKATLDAVQAERCTSLYGVPTMF--IAELAEPDFENYDLSSLRTGIMAGSPCPVEV 335
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ +++ YGMTETS ++ T D T++ +
Sbjct: 336 MKQVIERMGMSEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 375
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 376 TVGRVGPHLEVKIVDPATGLTVPRGAAGELCTRGYSVMLGYWNNPEKTAEAIDAARWMHT 435
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 436 GDIGVMDADGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEE 495
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VR+RE L ++ +R+ C K L +K PR +V FP
Sbjct: 496 LMAWVRMREG---------------AARLDADAVREFCTGK-LARYKIPR-YVHVVDEFP 538
Query: 308 LTSTGKIRRDEVR 320
+T TGK+R+ E+R
Sbjct: 539 MTVTGKVRKVEMR 551
>gi|410697627|gb|AFV76695.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 560
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 152/326 (46%), Gaps = 51/326 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
L G V +P+ E +EA+E+H VT VP + ++ GR+ S++
Sbjct: 273 LYAGFKIVLLPRPEIGPIVEAIEKHKVTHFPGVPTLYVAFNNFPGIE----GRNVKSIRI 328
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
L+G LP E+ K A+LI YG++E S +T +P L G
Sbjct: 329 CLSGAAPLPVEVAKR-FEEITGARLIEGYGLSEASP----VTHSNPVL----------GE 373
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
+ S+ G P P VE KV + V G ++ +G +VM YW++ +
Sbjct: 374 IKKGSI--------GMPLPSVEAKVVDEEGKEVPFGEVGELIVKGPNVMKGYWNR-PDET 424
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + V
Sbjct: 425 SRALKDGWLFTGDLARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAV 484
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + E V A + L+ +Q + D L CRE NL +K P
Sbjct: 485 VGVPDPYRGETVAAFLVLKPEYQGKVTEKD--------------LEAFCRE-NLAAYKVP 529
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRRE 322
R+ + +R+ P +S GKI R E+R E
Sbjct: 530 RI-IRFRESLPKSSVGKILRRELRDE 554
>gi|319653022|ref|ZP_08007127.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
gi|317395371|gb|EFV76104.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
Length = 550
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 49/339 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + VGA V + +F K+ L+ V+ T L VP + +A L + +++
Sbjct: 251 MACISVGATIVPVQEFSPKAVLKTVQDEKCTGLHGVPTMF--IAELNDPDFSKYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK +++ AYG TE+S +T DP
Sbjct: 309 TGIMAGSNCPIEVMKGVIERMGASEITIAYGQTESSPVITQTRTDDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + VG+ P+VE+K+ G+++ G + TRG HVM Y+ A
Sbjct: 357 --------ELRVESVGRALPNVEVKIVEPGTNNEVPTGEQGELCTRGYHVMKGYYKNPDA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ +D+ G + GR I GGEN+YP E+E L HP I+ +
Sbjct: 409 TKEAIDKEGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHPAILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A E VVA + L+E + + ++ LR++C+ K ++ K
Sbjct: 469 QVVGVPDAVYGEEVVAWIILKEDAELTPAD----------------LREYCKGK-ISRHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHLKSL 330
PR ++ + K +P+T++GKI++ ++R +EV+ +L
Sbjct: 512 IPR-YIEFTKQYPMTASGKIQKFKLREQAKEVIEKANTL 549
>gi|433608182|ref|YP_007040551.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407886035|emb|CCH33678.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 554
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 155/339 (45%), Gaps = 52/339 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD- 57
+A GAC V P F+ + L+AV TSL VP + +A+LA ++ D
Sbjct: 249 LAATTHGACVVLPAPAFDPAATLKAVADERCTSLYGVPTMFIAELA-----DPSFDSHDL 303
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
S++ + G P E+MK+ ++ YGMTETS ++ T D L+
Sbjct: 304 SSLRTGIMAGSPCPVEVMKQVVERMGMREVSICYGMTETSP-VSTQTRRDDALDR----- 357
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
+ VG+ PH+E+KV G + TRG VML YW+
Sbjct: 358 --------------RVATVGRVGPHLEVKVVDPEHGRTVPRGTPGELCTRGYSVMLGYWE 403
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
Q W+ TGD+ +DD G V + GR + GGENVYP E+E L HP
Sbjct: 404 QPDKTAEAIDPARWMHTGDLAVMDDDGYVSITGRIKDMVIRGGENVYPREIEEFLHTHPD 463
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
++ V+G+ +A+ E ++A +RLR L++E +R+ C L
Sbjct: 464 VLDAQVIGVPDAKYGEELMAWLRLRPG---------------AAPLTAEAVREFC-AGEL 507
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
+K PR +V FP+T TGK+R+ E+RR+ + L S
Sbjct: 508 AHYKIPR-YVHVVAEFPMTVTGKVRKVEMRRQAAAILGS 545
>gi|352100941|ref|ZP_08958452.1| AMP-binding domain protein [Halomonas sp. HAL1]
gi|350600862|gb|EHA16919.1| AMP-binding domain protein [Halomonas sp. HAL1]
Length = 573
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 146/312 (46%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L S++ + G P+E+MK
Sbjct: 283 FDPGKVLKAVHEQKATALYGVPTMF--IAELDHPDFPGTDLSSLRTGIMAGSICPAEIMK 340
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + + AYGMTETS T N + + V
Sbjct: 341 QVISKMNMKGVQIAYGMTETSPVST--------------------QTGANDSIEKRVSTV 380
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +G + TRG VML+YW+ A W+ TGD
Sbjct: 381 GRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATAEAIDEAGWMHTGD 440
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E ++
Sbjct: 441 LATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEELI 500
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L + SE ++ E LR++C+ K +T FK PR F + FP+T
Sbjct: 501 AWVKLNST--ASE-------------VTGEELREYCKGK-ITHFKIPRYFKFVDE-FPMT 543
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 544 VTGKIQKFKMRE 555
>gi|402820974|ref|ZP_10870534.1| hypothetical protein IMCC14465_17680 [alpha proteobacterium
IMCC14465]
gi|402510206|gb|EJW20475.1| hypothetical protein IMCC14465_17680 [alpha proteobacterium
IMCC14465]
Length = 570
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + +G V + ++++K AL VE+ +T+L VPA D+ L VK+T S+
Sbjct: 277 LTTMTIGGKIVMMDRWDAKQALALVEKEKITTLSGVPATHWDM--LNAVKETDYDLSSLN 334
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ NGG L+K + ++P A+L + YGMTET+ G + QA G
Sbjct: 335 SVSNGGQAATQNLLKNISETYPNAQLGAGYGMTETT----------------GAVSQANG 378
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV---------GRILTRGAHVMLRYWDQ 171
+ PQ G P V++K+ D + + G I RGA VM Y++
Sbjct: 379 EAF---MRAPQ--SAGLVLPMVDMKIIGDDGTEIPQGESGGEAGEICIRGATVMQGYYN- 432
Query: 172 FLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 228
+P + + W+ TGDIG +D+ G +++V R+ I SGGEN+Y E+E L Q+
Sbjct: 433 ---RPEDTAKAIKDGWMHTGDIGYLDEEGYLYIVDRKTDMIISGGENIYCAEIEQTLGQY 489
Query: 229 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 288
I I G+ + RL E ++ + L + +E L + REK
Sbjct: 490 EVIKEIAAFGVHDDRLGEKLIVALTLNTP------------------IHTEQLYAYAREK 531
Query: 289 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
L +K P F++ F T+TGKI + ++R+ + K
Sbjct: 532 -LADYKVPHAFII-EDEFNYTATGKIEKHKLRKAFLDSEK 569
>gi|229490610|ref|ZP_04384448.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|226184422|dbj|BAH32526.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
gi|229322430|gb|EEN88213.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 545
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ +++LEAV+ TSL VP + +A L S++ + G P E+
Sbjct: 262 PAFDPRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLSSLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ + +++ YGMTETS P + + +S+ Q +
Sbjct: 320 MKQVIDRMGMSEVSICYGMTETS-------------------PVSLQTRSDDSIEQ-RTE 359
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 360 TVGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D+ G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 420 GDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ V++RE D L ++ +R C K L +K PR +V FP
Sbjct: 480 LMVWVQMRE-------GADD--------LDADSVRAFCTGK-LAHYKIPR-YVHVVDEFP 522
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ +R + +
Sbjct: 523 MTVTGKVRKIAMREQAI 539
>gi|441502995|ref|ZP_20985002.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441429211|gb|ELR66666.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 525
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 51/330 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-----DS 58
+M GA + IP+F+ + L +EQH T VP + + ++ K T G S
Sbjct: 232 VMCGATLLMIPRFDPQVVLAQIEQHKATIFAGVPTMYIGM---LQAKATLSGEKNYDISS 288
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ ++GG LP+E+++ F ++ YG++ETS F L PG
Sbjct: 289 LRLAISGGAPLPAEVIRSFEAEF-DIPILEGYGLSETSPVACFHHL--DAERIPGS---- 341
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
VG+P VE++V + V G IL RG +VM Y ++
Sbjct: 342 ----------------VGQPVQGVEIRVVDEQGKTVETGQDGEILIRGHNVMKGYLNR-A 384
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + S + WL TGDIG D GN+++V R + GG NVYP E+E VL+ HPG+
Sbjct: 385 EETASSLKDGWLHTGDIGRFDQAGNLFVVDRLKDMVIRGGFNVYPREIEDVLMTHPGVAM 444
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+GI + ++ E + A V L+++ + +E +Q L+ S+ L +
Sbjct: 445 AAVIGIPDEKVGEEIKAYVVLKDNGESAEKPDEQC-----LIEWSKT--------QLASY 491
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR + +R+ P+++TGKI + E++ E+
Sbjct: 492 KYPRQ-IEFRQQLPISATGKILKKELKAEL 520
>gi|408375511|ref|ZP_11173177.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
gi|407764638|gb|EKF73109.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
Length = 516
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 151/330 (45%), Gaps = 53/330 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + H +P+F+ L +EQ VT+ + VP ++ LA+ R+ S+K
Sbjct: 218 FAVTLAAGTHGIVPRFDVDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQA 118
++L G +P ++ A P YG TE S +T + P PG +L A
Sbjct: 276 RMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHIPGGEKLRSA 332
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD- 170
G+ A VE+ +V S G+ VG I RG +VML YW
Sbjct: 333 -----------------GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGM 373
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ ++ G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP
Sbjct: 374 ESTTADTLRNG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPE 431
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ V+GI + R E V A V LRE SE+ + +HCRE+ +
Sbjct: 432 VQECAVIGIPDERWGEAVHAIVVLREGEHASEAE----------------IIEHCRER-I 474
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+K PR + P++ GK+ ++E+R
Sbjct: 475 AGYKVPRSVDFKAESLPVSGAGKVLKNELR 504
>gi|312140942|ref|YP_004008278.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890281|emb|CBH49599.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 550
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P FE + L AV+ TSL VP + +A L S++ + G P E+
Sbjct: 267 PAFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLSSLRTGIMAGSPCPVEV 324
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS P + +S+ Q +
Sbjct: 325 MKQVIERMGMAEVSICYGMTETS-------------------PVSLQTRRDDSIDQ-RVS 364
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 365 TVGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHT 424
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 425 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 484
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ +R+RE Q L + +R+ C + L +K PR +V FP
Sbjct: 485 LMVWIRMREGAQ---------------PLDVDKVREFCTGR-LAHYKIPR-YVHLVDEFP 527
Query: 308 LTSTGKIRRDEVR 320
+T TGKIR+ E+R
Sbjct: 528 MTVTGKIRKVEMR 540
>gi|443673957|ref|ZP_21139000.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443413383|emb|CCQ17339.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 538
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 142/313 (45%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV TSL VP + L + G S++ + G P+E+
Sbjct: 258 PSFDPVATLTAVASEKCTSLYGVPTMFIAELALENFGEFDLG--SLRTGIMAGSPCPTEV 315
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ + ++ YGMTETS P + + +S+ Q +
Sbjct: 316 MKQVIDRMGMTEVSICYGMTETS-------------------PVSLQTRSDDSIEQ-RVS 355
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ H G + TRG VML YW+Q E W+ T
Sbjct: 356 TVGRVGPHLEVKIVDPVLGHTVPRGDAGELCTRGYSVMLGYWEQPEKTAEAIDDERWMHT 415
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D+ G V + GR + GGENVYP EVE L HP I+ V+G+ +A+ E
Sbjct: 416 GDIGVMDEDGYVAITGRIKDMVIRGGENVYPREVEEFLYTHPDILDAQVIGVPDAKYGEE 475
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ +R+R+ L S +R C + L +K PR +V FP
Sbjct: 476 LMVWIRMRDV---------------AAPLDSAAVRAFC-DGRLAHYKIPR-YVHVVDEFP 518
Query: 308 LTSTGKIRRDEVR 320
+T TGK+R+ E+R
Sbjct: 519 MTVTGKVRKVEMR 531
>gi|407274853|ref|ZP_11103323.1| AMP-binding domain protein [Rhodococcus sp. P14]
Length = 552
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 146/316 (46%), Gaps = 51/316 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F+ L AV + TSL VP + +A+LA + G D S++ + G P
Sbjct: 266 PAFDPAQTLAAVAEERCTSLYGVPTMFIAELA-----DPGFDGFDLSSLRTGIMAGSPCP 320
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+MK+ A++ YGMTETS ++ T D T++
Sbjct: 321 VEVMKQVIERMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ------------------- 360
Query: 131 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ VG+ PH+E+K+ + G + TRG VML YW+Q W
Sbjct: 361 RVSTVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNQPDKTADAIDAARW 420
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGDIG +D G V + GR + GGEN+YP E+E L HP I+ VVG+ + +
Sbjct: 421 MHTGDIGVMDADGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVPDQKY 480
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++ +R+RE L ++ LR++C K L +K PR +V
Sbjct: 481 GEELMVWIRMREG---------------AAPLDAQSLREYCTGK-LAHYKIPR-YVHVVD 523
Query: 305 PFPLTSTGKIRRDEVR 320
FP+T TGKIR+ E+R
Sbjct: 524 EFPMTVTGKIRKVEMR 539
>gi|417319509|ref|ZP_12106067.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328474699|gb|EGF45504.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 513
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+F+ K LE +E+H VT VP + L + V+ + S++
Sbjct: 230 ASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|453069337|ref|ZP_21972599.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
gi|452763636|gb|EME21916.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ +++LEAV+ TSL VP + +A L S++ + G P E+
Sbjct: 246 PAFDPRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLSSLRTGIMAGSPCPVEV 303
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ + +++ YGMTETS P + + +S+ Q +
Sbjct: 304 MKQVIDRMGMSEVSICYGMTETS-------------------PVSLQTRSDDSIEQ-RTE 343
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 344 TVGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHT 403
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D+ G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 404 GDIGVMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 463
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ V++RE D L ++ +R C K L +K PR +V FP
Sbjct: 464 LMVWVQMRE-------GADD--------LDADSVRAFCTGK-LAHYKIPR-YVHVVDEFP 506
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ +R + +
Sbjct: 507 MTVTGKVRKIAMREQAI 523
>gi|339008758|ref|ZP_08641331.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
gi|338774558|gb|EGP34088.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
Length = 526
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L VGA + LE VE++ T L P + +A L + S++K
Sbjct: 234 LYVGASGTILEHAAPALMLETVERYGATQLFCPPTVW--IALLRSEDFAARNLSSLQKCY 291
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P E++KE P++KL + YG TE + T + +D +T
Sbjct: 292 YGAAIMPVEIIKELCMRLPQSKLYNFYGQTEVAPLATVLKPHDQLRKTGS---------- 341
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAKPS 177
GKPA HVE K+ + + H+G I+ R +H+ML Y+ D+ + +
Sbjct: 342 -----------AGKPALHVETKIVDESGNEVPIGHIGEIVHRSSHIMLGYFKDEEKTRSA 390
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
G W +GD+GS+D+ G + +V R+ IK+GGENV E+E + QHP + + V+
Sbjct: 391 FQGG--WFHSGDLGSMDEEGYITVVDRKKDMIKTGGENVASREIEEWMYQHPKVSEVAVI 448
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + E V A V +N + + +ELL Q C+ K L+ FK P+
Sbjct: 449 GIPHPYWIEAVTAIVV---------ANAGEEIETEELL-------QFCK-KGLSSFKVPK 491
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
FV+ P +GKI + E+RR+
Sbjct: 492 -FVVVTDQLPRNPSGKIVKRELRRQ 515
>gi|313679822|ref|YP_004057561.1| amp-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
gi|313152537|gb|ADR36388.1| AMP-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
Length = 558
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 152/325 (46%), Gaps = 49/325 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V +P+FE + A+E+H VT VP + T ++K + ++K L
Sbjct: 268 VMRGMKMVLLPRFEIAEVVAAIEKHRVTHFPGVPTMYVAFNTFPGIEK--RNIRTIKVCL 325
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ + AKL+ YG+TE + LY G
Sbjct: 326 SGAAPLPVEVATK-FEELTGAKLVEGYGLTEAAPVTHCNPLY--------------GERK 370
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 177
S +G P P V+ C+D H VG ++ +G +VM YW++ + +
Sbjct: 371 VGS--------IGLPFPSVD-AYCADPDGHPLPPGEVGELVVKGPNVMKGYWNR-PEETA 420
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + VV
Sbjct: 421 QTLKDGWLFTGDVARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVKEAAVV 480
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ +A E V A V L+E + E +S E L+Q +E+ L +K P+
Sbjct: 481 GVPDAYRGETVKAFVVLKEGY--------------EGQVSEEELKQFAKER-LAAYKVPK 525
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
L+ R P T+ GKI R +R+E
Sbjct: 526 LWEF-RDDLPKTAVGKILRRMLRKE 549
>gi|449283065|gb|EMC89768.1| Acyl-CoA synthetase family member 2, mitochondrial, partial
[Columba livia]
Length = 558
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 155/318 (48%), Gaps = 39/318 (12%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
+ M + G+ +F P FE K+ALE+V Q + + P + D+ + + ++ D
Sbjct: 277 VVMALHGSSCIFSSPTFEGKAALESVSQEKCSFIHGTPTMFIDMIS----QPNFESYDLS 332
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G +P E+++ + + + AYG TE +S +TFM D ++ + +
Sbjct: 333 SLRGGVIAGSPVPPEVIRTVISKMHMQEAVIAYGTTE-NSPVTFMGFPDDSV---AKRTE 388
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G + PN+ + + GK P + G + RG VML YW+
Sbjct: 389 TVGCILPNTEAKIEDPETGKLVP----------PNTPGELQIRGYCVMLGYWNDPSKTSE 438
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V T E W TGDI S+D+ G +VGR I GGENVYP E+E L HP + + VV
Sbjct: 439 VITAERWYKTGDIASLDEHGYCRIVGRCKDMIIRGGENVYPAEIEQFLHTHPKVKEVQVV 498
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ ++R+ E + AC+R+ +E E ++ C+ K ++ FK PR
Sbjct: 499 GVKDSRMGEEICACIRVCAGQDCTE----------------EEIKAFCKGK-ISHFKIPR 541
Query: 298 LFVLWRKPFPLTSTGKIR 315
++++ +PLT +GK+R
Sbjct: 542 -YIVFVAQYPLTVSGKVR 558
>gi|307545011|ref|YP_003897490.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
gi|307217035|emb|CBV42305.1| acyl-CoA synthetase [Halomonas elongata DSM 2581]
Length = 560
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 147/318 (46%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LEAV + T+L VP + +A L + S++ + G P E+M+
Sbjct: 281 FDPLATLEAVSEERATALYGVPTMF--IAELEHPEFERFDLSSLRTGIMAGSICPIEVMR 338
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS ++F T D L+ + V
Sbjct: 339 RVIERMNMQEVTICYGMTETSP-VSFQTQTDAPLDK-------------------RVTTV 378
Query: 136 GKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G PH+E+K+ S DG++ G + TRG VML YW+ A W+ TGD
Sbjct: 379 GTIHPHLEVKLVSPDDGAAVPRGEPGELCTRGYSVMLGYWNNDEATADAIDAAGWMHTGD 438
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++DD G V +VGR I GGEN+YP E+E L HP I + ++G+ + + E ++
Sbjct: 439 LATMDDEGYVAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQIIGVPDEKYGEEIM 498
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L E L E L+ C E + FK PR +V + FP+T
Sbjct: 499 AWVKLSEGED----------------LDEEGLKAFC-EGRIAHFKVPR-YVKFVDEFPMT 540
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ ++R E + L
Sbjct: 541 VTGKIQKFKMREEAVHEL 558
>gi|456011983|gb|EMF45703.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 547
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + V +FE K L+ V+ T L VP + +A L + + +++
Sbjct: 250 MAAVTHSTTMVIAEQFEPKRILQMVQDEKCTGLHGVPTMF--IAELNHPEFSSFDTSTLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ N +++ AYG TE+S +T T D +E
Sbjct: 308 TGIMAGSSCPIEVMKKVINDMGASEITIAYGQTESSPVIT-QTRADDDIE---------- 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
+ VGKP VE+K+ + G + TRG HVM Y+ A
Sbjct: 357 ---------KRVSTVGKPHAGVEVKIIDPATGETVEIGMPGELCTRGYHVMSGYYKNEDA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGDI D+ G + + GR + GGEN+YP E+E L QHP ++ +
Sbjct: 408 TKVAIDSEGWLHTGDIAVEDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHPSVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ + + E ++A + L+E Q LS+E LR +C+ K ++ K
Sbjct: 468 QVIGVPDPKYGEELMAWIILKEDEQ----------------LSAEELRTYCKGK-ISRHK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 511 IPR-YIEFTKEYPMTASGKIQKFKLRELSIEH 541
>gi|384431610|ref|YP_005640970.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333967078|gb|AEG33843.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 548
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 47/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +P+ E K+ +EA+E+H VT VP + ++K + SV+ +
Sbjct: 262 LLGGAKLVLLPRPEIKAIVEAIEKHRVTLFPGVPTLYVAFNNFPGIEK--RDLKSVRACI 319
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E + E + AKL+ YG+TE S LY G+ + G+
Sbjct: 320 SGSAPLPLE-VAERFMALTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS-- 367
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
VG P P V+ KV + VG + +G +VM YW++ +
Sbjct: 368 -----------VGLPFPGVDAKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETQK 415
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + VVG
Sbjct: 416 TLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVG 475
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q ++ D + CR+ NL +K PR+
Sbjct: 476 VPDPYRGETVAAFLVLKPEYQNKVTDKD--------------IETFCRQ-NLAAYKVPRI 520
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 -IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|239918243|ref|YP_002957801.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|281415565|ref|ZP_06247307.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
gi|239839450|gb|ACS31247.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Micrococcus
luteus NCTC 2665]
Length = 592
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 45/313 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE SAL AV TSL VP + +A L R + +++ + G P E+MK
Sbjct: 296 FEPVSALRAVAATGATSLYGVPVMF--IAMLARPEADALDLSTLRTGVMAGSTCPVEVMK 353
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + F +++ YGMTET+ ++ MT D +LE Q V
Sbjct: 354 KVIDRFHMSEVAICYGMTETAP-VSTMTRRDDSLEVRTQ-------------------TV 393
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE K+ + V G + TRG VML YWD V + W+ +GD
Sbjct: 394 GRTMPHVETKIVDPATGDVVPRGATGELCTRGYSVMLGYWDAPEKTAEVLDADGWMHSGD 453
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ S+D+ G+V + GR + GGEN+ P EVE L HP I + VVG+ + + E ++
Sbjct: 454 LASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDIQDVQVVGVPDEKYGEQLM 513
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
ACV +++ + L+ + +R+ + + FK P V FP+T
Sbjct: 514 ACVIMKDGIE---------------PLTVDAVREFAAGR-IAHFKIP-AHVRVLDAFPMT 556
Query: 310 STGKIRRDEVRRE 322
+GK+R+ E+R E
Sbjct: 557 VSGKVRKVELREE 569
>gi|219667086|ref|YP_002457521.1| AMP-dependent synthetase/ligase [Desulfitobacterium hafniense
DCB-2]
gi|219537346|gb|ACL19085.1| AMP-dependent synthetase and ligase [Desulfitobacterium hafniense
DCB-2]
Length = 528
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 167/343 (48%), Gaps = 61/343 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+ +++ GA V F+ L +EQ VT ++ +P +T +R+ RD
Sbjct: 222 LCVMVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDV 276
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
SVK + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 277 SSVKVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM----- 327
Query: 117 QAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 170
++H P+ +G+P P +L++ + VG + +G + Y+
Sbjct: 328 ---------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYK 378
Query: 171 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
Q P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +
Sbjct: 379 Q----PELTDGTIADGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRK 434
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
HP ++ V+G+ + E V+A V+LR + + ++ +++HC+
Sbjct: 435 HPAVLDCSVIGVPDQTFGEAVMAVVKLRAGYTAAAAD----------------IQEHCK- 477
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 327
++L+ +K PR +V + FP+ S GKI++ ++R RE+ SHL
Sbjct: 478 RDLSSYKKPR-YVEFLDEFPVDSAGKIQKFKLRKKYREIYSHL 519
>gi|300790301|ref|YP_003770592.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384153828|ref|YP_005536644.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399542181|ref|YP_006554843.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299799815|gb|ADJ50190.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340531982|gb|AEK47187.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398322951|gb|AFO81898.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 552
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 151/328 (46%), Gaps = 46/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ ++ LEAV TSL VP + +A L S++ +
Sbjct: 253 GACMVIPAPAFDPRATLEAVAAERCTSLYGVPTMF--IAELNHPDFGEFDLTSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK+ + A++ YGMTETS T T D ++E
Sbjct: 311 GSPCPVEVMKQVIDRMGMAEVSICYGMTETSPVST-QTRSDDSIER-------------- 355
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 356 -----RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQPDKTAEAI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+
Sbjct: 411 DAARWMHTGDLAVMDGDGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A VR+R+ L++E +R+ C K L +K PR +
Sbjct: 471 PDEKYGEELMAWVRMRQGAS---------------PLTAEKVREFCSGK-LAHYKIPR-Y 513
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
V FP+T TGK+R+ E+R + +S L
Sbjct: 514 VHVVDEFPMTVTGKVRKVEMREKSISLL 541
>gi|23099672|ref|NP_693138.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22777902|dbj|BAC14173.1| long-chain fatty-acid-CoA ligase [Oceanobacillus iheyensis HTE831]
Length = 547
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + I +FE + L+ VEQ VT+L VP + +A L S++
Sbjct: 251 LAAVSVGATMIPIQEFEPEQVLKTVEQESVTALHGVPTMF--IAELNHPNFERYNLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N +++ YG TE+S +T DP
Sbjct: 309 TGVMAGSNCPVEVMKNVMNKMNMSEITICYGQTESSPVITQTRANDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + VGK P+VE+K+ ++ G + TRG HVM Y+ A
Sbjct: 357 --------ELRVESVGKALPNVEVKIIDPATNEELPHYTQGELCTRGYHVMKGYYKNPEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +DD G + GR I GGEN+YP E+E +L +HP I+
Sbjct: 409 TQRTIDEDGWLHTGDLAIMDDNGYCKITGRLKDMIIRGGENIYPREIEELLYKHPKILDA 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E V A + L+E + SS+ ++Q C + ++ +K
Sbjct: 469 QVVGVPDEKFGEEVHAWIILKEGE----------------ISSSDEIKQFCNGQ-ISKYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ + +P+T++GKI++ ++R + ++ ++
Sbjct: 512 IPK-HIFITDAYPMTASGKIQKFKLREKSLNEVE 544
>gi|395764069|ref|ZP_10444738.1| AMP-binding domain protein [Janthinobacterium lividum PAMC 25724]
Length = 559
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 156/334 (46%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ KS L V+ T L VP + +A L ++
Sbjct: 262 LACVTHGAAMVFPGEGFDPKSVLGTVQAERCTGLHGVPTMF--IAILDHPDFKQYDLSTL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M A++ AYGMTETS ++F T D P+A
Sbjct: 320 RTGIMAGSPCPMEVMTRVIELMHMAEITIAYGMTETSP-VSFQTSIDD--------PRAM 370
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ VH PH+E+K+ V G +LTRG VM YW D
Sbjct: 371 RVASIGRVH-----------PHLEVKIIDAQGRIVPRGEKGELLTRGYSVMQGYWGDPEK 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ T W+ TGD+ IDD G +VGR + GGEN+YP EVE L +HP ++
Sbjct: 420 TREAIDTAR-WMHTGDLAVIDDKGFCSIVGRSKDMVIRGGENIYPREVEEFLYRHPSVLD 478
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VG+ +A+ E + AC+ LR Q SSE +R C + + +
Sbjct: 479 VQCVGVPDAKYGEELCACIILRPGMQ----------------ASSEDIRAFC-DGQIAYY 521
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + + FP+T TGKI++ +R++V + L
Sbjct: 522 KIPR-YVRFVEQFPMTVTGKIQKYLLRQQVATDL 554
>gi|408681796|ref|YP_006881623.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
gi|328886125|emb|CCA59364.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
Length = 534
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 147/322 (45%), Gaps = 46/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV++ TSL VP + +A L S++ +
Sbjct: 246 GACMVIPAPSFDPAATLRAVQEERCTSLYGVPTMF--IAELNLPDFGTYDLSSLRTGIMA 303
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS T T D LE
Sbjct: 304 GSPCPVEVMKRVVAEMNMAEVSICYGMTETSPVST-QTRRDDDLER-------------- 348
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PHVE+KV + G + TRG VML YWD+
Sbjct: 349 -----RTGTVGRVMPHVEVKVVDPATGLTVARGTAGELCTRGYSVMLGYWDEPEKTGEAI 403
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ D G V +VGR I GGENVYP E+E L HPGI + VVG+
Sbjct: 404 DAGRWMHTGDLATMRDDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPGIADVQVVGV 463
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E ++ACV R D ++ + E + CR++ L +K PR
Sbjct: 464 PDERYGEEILACVIPR----------DPAAPP-----TLEDVTAFCRDR-LAHYKIPRRL 507
Query: 300 VLWRKPFPLTSTGKIRRDEVRR 321
+ + FP+T +GK+R+ E+R+
Sbjct: 508 EILTE-FPMTVSGKVRKVELRQ 528
>gi|297191141|ref|ZP_06908539.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723338|gb|EDY67246.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 535
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 149/324 (45%), Gaps = 50/324 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV+Q TSL VP + +A L +++ +
Sbjct: 248 GACMVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSTLRTGIMA 305
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 306 GSPCPVEVMKRVVAEMNMAEVSICYGMTETSP-VSTQTRRDDDLER-------------- 350
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ-FLAKPSV 178
+ VG+ PH+E+K+ S G + TRG VML YWD+ SV
Sbjct: 351 -----RTGTVGRVMPHIEVKIVDPVSGVTLPRGEAGELCTRGYSVMLGYWDEPEKTAESV 405
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VVG
Sbjct: 406 DAGR-WMHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVVG 464
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 297
+ + R E ++ACV R+ + E + + CRE+ L +K P R
Sbjct: 465 VPDERYGEEILACVIPRDPADAP---------------TLEEITEFCREQ-LAHYKIPRR 508
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRR 321
L VL FP+T +GK+R+ E+RR
Sbjct: 509 LEVL--ADFPMTVSGKVRKVELRR 530
>gi|402899613|ref|XP_003912785.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Papio anubis]
Length = 642
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + + L P + D+ + + D
Sbjct: 347 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYDIS 402
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N L+ AYG TE S P
Sbjct: 403 TMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PV 443
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 444 TFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGE 502
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 503 PQKTEEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKV 562
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++
Sbjct: 563 QEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCKGK-IS 605
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 606 HFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 640
>gi|424858994|ref|ZP_18283008.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356661503|gb|EHI41814.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 519
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 150/321 (46%), Gaps = 45/321 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
++G VF+P F ++ LEA+++H VT++ VP ++ L V+ SVK +
Sbjct: 231 LLGGTQVFLPTFSPRAVLEAIQRHRVTTVGAVPVMLQMLVAHPDVES--YDLSSVKSVRY 288
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + L++ A F + YGMTET+ + G+ A G+
Sbjct: 289 GASPISPTLLQRAMTVFRNSGFAQGYGMTETAH-----------ITVLGRDDHAAGSEVL 337
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
S G+ PH EL+V V G I+TRG HVML YW++ +V
Sbjct: 338 RSA--------GRALPHCELRVVDVDDREVSVGVLGEIVTRGDHVMLGYWNRPEETAAVL 389
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGDIG +D G +++V R I +GGENVY EVE L HP + V+G+
Sbjct: 390 RNG-WMHTGDIGYVDRHGYLFVVDRIKDMIITGGENVYSTEVENALAAHPAVEACSVIGV 448
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V + V LRE + ++ D+ LR H R + G+K PR
Sbjct: 449 PDTRWGERVHSVVVLREG---ARTDADE-------------LRAHVRGL-IAGYKVPRT- 490
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
V + P+++ GK+ + ++R
Sbjct: 491 VEFLDALPVSAAGKVLKRDLR 511
>gi|15613694|ref|NP_241997.1| AMP-binding domain protein [Bacillus halodurans C-125]
gi|10173747|dbj|BAB04850.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
Length = 546
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 46/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F L+AVE T L VP + +A L ++
Sbjct: 251 LACVSVGATMVPVQEFNPTRVLQAVEAEKCTGLHGVPTMF--IAELNDEDFMNYNLSHLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK A + + AYG TETS +T + DP +E Q
Sbjct: 309 TGIMAGSNCPIEVMKAAIEKMGMSDITIAYGQTETSPVITQTRVDDP-IELRVQ------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+P P+VE+K+ G+ G + TRG HVM Y+ A
Sbjct: 362 -------------TVGRPLPNVEVKIVEPGTEKEVAPGVQGELCTRGYHVMKGYYKNQQA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D+ G + GR I GGEN+YP E+E L QHP I+
Sbjct: 409 TREVIKEDGWLHTGDLAVMDEAGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPDILDA 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E V A ++L+ + ++SE +R C+ K + +K
Sbjct: 469 QVVGVPDEKYGEAVSAWIKLKPG----------------VSVTSEEIRDFCQGK-VAHYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR ++ + +P+T++GK+++ ++R+
Sbjct: 512 IPR-YIEFVDDYPMTASGKVQKFKLRQ 537
>gi|432340260|ref|ZP_19589709.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
gi|430774710|gb|ELB90289.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
Length = 546
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 146/320 (45%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ K+ L+AVE TSL VP + +A L S++ + G P E+
Sbjct: 262 PSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS ++ T D T++ +
Sbjct: 320 MKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 359
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 360 TVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 420 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ VR+++ + L + +R+ C K L +K P+ +V FP
Sbjct: 480 LMVWVRMKDGTE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFP 522
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ E+R + + L
Sbjct: 523 MTVTGKVRKVEMREQSLDLL 542
>gi|332662713|ref|YP_004445501.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332331527|gb|AEE48628.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 567
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 52/321 (16%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
F++ S L AVE+ T + VP + DL + T S++ + G P E
Sbjct: 279 FDAASTLAAVEREKATGIFGVPTMFIAELDLPNFDQYDLT-----SLRTGIMAGSPCPIE 333
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+MK+ + +++ AYGMTETS T + P + Q
Sbjct: 334 VMKKVQSLMHVSEMEIAYGMTETSPVSTQTRVGTPL--------------------EKQV 373
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH+E+K+ + G + TRG VML YW+ A + W+
Sbjct: 374 STVGQIHPHLEVKIIDPETGRTVPRGIPGELCTRGYSVMLGYWNNETATRNAIDKARWMH 433
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+ ++D+ G V +VGR I GGEN+YP E+E L HP I + V+G+ +A+ E
Sbjct: 434 TGDLATMDEEGYVKIVGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVIGVPDAKYVE 493
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
V+A +R++E L+ E ++ +C + + +K P+ +V + F
Sbjct: 494 AVMAWIRVKEGET----------------LTVEEVQAYC-QGQIAHYKIPQ-YVRFTDGF 535
Query: 307 PLTSTGKIRRDEVRREVMSHL 327
P+T TGKIR+ E+R + ++ L
Sbjct: 536 PMTVTGKIRKVEMREQSIAEL 556
>gi|109114316|ref|XP_001097818.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Macaca mulatta]
Length = 618
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ L + + ++
Sbjct: 323 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDI--LNQPDFSTYDISTM 380
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P EL++ N L+ AYG TE S P F
Sbjct: 381 RGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PVTF 421
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 422 ANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGEPQ 480
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W TGDI ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 481 KTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 540
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++ F
Sbjct: 541 VQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCKGK-ISHF 583
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 584 KIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 616
>gi|75075869|sp|Q4R4Z9.1|ACSF2_MACFA RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|67970968|dbj|BAE01826.1| unnamed protein product [Macaca fascicularis]
Length = 618
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + + L P + D+ + + D
Sbjct: 323 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYDIS 378
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N L+ AYG TE S P
Sbjct: 379 TMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PV 419
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 420 TFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGE 478
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 479 PQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKV 538
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++
Sbjct: 539 QEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCKGK-IS 581
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 582 HFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 616
>gi|24418933|ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus]
gi|81901906|sp|Q8VCW8.1|ACSF2_MOUSE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|17390865|gb|AAH18371.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|26329787|dbj|BAC28632.1| unnamed protein product [Mus musculus]
gi|38649240|gb|AAH63269.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|148683985|gb|EDL15932.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
gi|148683986|gb|EDL15933.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
Length = 615
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 157/337 (46%), Gaps = 51/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFT 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 376 SIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------Q 428
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
G+V G+ PH E ++ + + + G + RG VM YW +
Sbjct: 429 KAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGE 475
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI +D+ G +VGR I GGEN+YP E+E L+HP +
Sbjct: 476 PQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQV 535
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
VVG+ + R+ E + AC+RL+ ++E ++ C+ K ++
Sbjct: 536 QEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAFCKGK-IS 578
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 579 HFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|254230509|ref|ZP_04923881.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262393852|ref|YP_003285706.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151936957|gb|EDN55843.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262337446|gb|ACY51241.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 513
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 157/330 (47%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 230 ASVLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 286 AISGGAPLPTEIFRAFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PGS------- 335
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV +G++ G I+ RG +VM Y D +P
Sbjct: 336 -------------VGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I
Sbjct: 379 EVTESALQNGWFHTGDVGRFDCSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI N E + A V L+ + +E L++ +E+ L F
Sbjct: 439 VAVIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR +V R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|74146500|dbj|BAE32109.1| unnamed protein product [Mus musculus]
Length = 615
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 157/337 (46%), Gaps = 51/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFT 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 376 SIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------Q 428
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
G+V G+ PH E ++ + + + G + RG VM YW +
Sbjct: 429 KAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCVMQGYWGE 475
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI +D+ G +VGR I GGEN+YP E+E L+HP +
Sbjct: 476 PQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQV 535
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
VVG+ + R+ E + AC+RL+ ++E ++ C+ K ++
Sbjct: 536 QEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAFCKGK-IS 578
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 579 HFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|355753990|gb|EHH57955.1| hypothetical protein EGM_07709, partial [Macaca fascicularis]
Length = 639
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ L + + ++
Sbjct: 344 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDI--LNQPDFSTYDISTM 401
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P EL++ N L+ AYG TE S P F
Sbjct: 402 RGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PVTF 442
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 443 ANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGEPQ 501
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W TGDI ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 502 KTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQE 561
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++ F
Sbjct: 562 VQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCKGK-ISHF 604
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 605 KIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 637
>gi|296164101|ref|ZP_06846720.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900541|gb|EFG79928.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 517
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 152/327 (46%), Gaps = 55/327 (16%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+G HV + FE + L+ +E+H VT ++ VP ++ + V+ S++ ++ G
Sbjct: 224 LGGTHVMLSTFEPSAILQTIERHQVTDVLLVPTMLQMVVDHPAVRD--YDLSSLRNVMYG 281
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
+ ++ A + A+ + YGMTE S T + D E P L A
Sbjct: 282 ASPISEAVLSRAMKTVRSARFMQGYGMTELSPLATVLRPEDH--EHPDLLRSA------- 332
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 180
G+ AP E+K+ V G I+ RG +VML YW+ KP +
Sbjct: 333 ----------GRAAPCAEVKIVDADDKEVPPGNTGEIVVRGGNVMLGYWN----KPDETA 378
Query: 181 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W+ TGD G +D+ G V++V R I SGGENVY EVE VL +HP + V+
Sbjct: 379 AALRNGWMHTGDAGYMDERGYVFVVDRIKDMIISGGENVYSTEVENVLSRHPEVAACAVI 438
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+A+ E V A V L E+ +++E LR C+ + + G+KAPR
Sbjct: 439 GVADENWGERVHAVVVLTENSS----------------VTAEELRDFCKTQ-IAGYKAPR 481
Query: 298 L--FVLWRKPFPLTSTGKIRRDEVRRE 322
FV PL+ GK+ + E+R++
Sbjct: 482 TASFV---DALPLSGAGKVLKRELRKQ 505
>gi|381210101|ref|ZP_09917172.1| AMP-binding domain protein [Lentibacillus sp. Grbi]
Length = 544
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 46/335 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G V + +F+ + ++AV + T L VP + +A L + ++
Sbjct: 250 LAAVSKGTTMVLLEQFDPEKVMKAVSEEKCTGLHGVPTMF--IAELNHPNFSTYDFSHLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ N ++ AYG TE+S DP
Sbjct: 308 TGIMAGSTCPIEVMKDVMNKMGATEITIAYGQTESSPVFLQTRTDDPV------------ 355
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
+ + VGK P+VE+K+ G+ G + TRG HVM Y++ A
Sbjct: 356 --------EVKATTVGKVHPNVEVKIIVPGTEQEQVQGEPGELCTRGYHVMKGYYNNQEA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+ +D+ G + GR I GGEN+YP EVE L QHP ++ +
Sbjct: 408 TDAAIDRDGWLHTGDLAVMDENGYFQITGRMKDMIIRGGENIYPREVEKFLYQHPDVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + + E ++A + L++ WS + + E +R C E N++ K
Sbjct: 468 QVVGIPDKKYGEELMAWIILKD---WSNA-------------TEEDIRSFC-EGNISRHK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
P+ ++ + +P+T++GKI++ ++R + ++ ++
Sbjct: 511 IPK-YIKFTAEYPMTASGKIQKFKLREQAVAEVRQ 544
>gi|359786297|ref|ZP_09289433.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359296411|gb|EHK60663.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 567
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 144/312 (46%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L S++ + G P+E+MK
Sbjct: 283 FDPGKVLKAVHEQKATALYGVPTMF--IAELEHPDFASTDFSSLRTGIMAGSICPAEIMK 340
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + + AYGMTETS T N + V
Sbjct: 341 QVIDKMNMKGVQIAYGMTETSPVST--------------------QTGANDSIDKRVSTV 380
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +G + TRG VML+YW A W+ TGD
Sbjct: 381 GRTQPHLESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWKNEKATAEAIDEAGWMHTGD 440
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E ++
Sbjct: 441 LATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEELI 500
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L + S+ D ++ E LR +C+ K +T FK PR F + FP+T
Sbjct: 501 AWVKL------NSSSGD---------VTGEELRNYCKGK-ITHFKIPRYFKFVDE-FPMT 543
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 544 VTGKIQKFKMRE 555
>gi|89897044|ref|YP_520531.1| hypothetical protein DSY4298 [Desulfitobacterium hafniense Y51]
gi|89336492|dbj|BAE86087.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 528
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 166/343 (48%), Gaps = 61/343 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+ +++ GA V F+ L +EQ VT ++ +P +T +R+ RD
Sbjct: 222 LCVIVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDV 276
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
SVK + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 277 SSVKVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM----- 327
Query: 117 QAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 170
++H P+ +G+P P +L++ + VG + +G + Y+
Sbjct: 328 ---------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYK 378
Query: 171 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
Q P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +
Sbjct: 379 Q----PELTDGTITDGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRK 434
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
HP ++ V+G+ + E V+A V+LR + + ++ +++HC+
Sbjct: 435 HPAVLDCSVIGVPDQTFGEAVMAVVKLRSGYTATAAD----------------IQEHCK- 477
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 327
++L+ +K PR +V + FP+ S GKI++ +R RE+ SHL
Sbjct: 478 RDLSSYKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYREIYSHL 519
>gi|289706149|ref|ZP_06502518.1| AMP-binding domain protein [Micrococcus luteus SK58]
gi|289557128|gb|EFD50450.1| AMP-binding domain protein [Micrococcus luteus SK58]
Length = 611
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 45/313 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE SAL AV TSL VPA+ +A L R + +++ + G P E+MK
Sbjct: 313 FEPVSALRAVAATGATSLYGVPAMF--IAMLARPEADALDLSTLRTGVMAGSTCPVEVMK 370
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + F +++ YGMTET+ ++ MT D +LE Q V
Sbjct: 371 KVIDRFHMSEVAICYGMTETAP-VSTMTRRDDSLEVRTQ-------------------TV 410
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE K+ + + G + TRG VML YWD V + W+ +GD
Sbjct: 411 GRTMPHVETKIVEPVTGDIVPRGATGELCTRGYSVMLGYWDAPEKTAEVLDADGWMHSGD 470
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ S+D+ G+V + GR + GGEN+ P EVE L HP I + VVG+ + + E ++
Sbjct: 471 LASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDIQDVQVVGVPDEKYGEQLM 530
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
ACV +++ + L+ + +R+ + + FK P V FP+T
Sbjct: 531 ACVIMKDGVE---------------PLTVDAVREFAAGR-IAHFKIP-AHVRVLDAFPMT 573
Query: 310 STGKIRRDEVRRE 322
+GK+R+ E+R E
Sbjct: 574 VSGKVRKVELREE 586
>gi|433658071|ref|YP_007275450.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432508759|gb|AGB10276.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 513
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 230 ASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 VVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHALAVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|448746178|ref|ZP_21727846.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445566040|gb|ELY22147.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 567
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 145/312 (46%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV T+L VP + +A L +++ + G P+E+MK
Sbjct: 283 FDPGKVLKAVHDQKATALYGVPTMF--IAELEHEGFASTDFSTLRTGIMAGSICPAEIMK 340
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N + AYGMTETS T N + + V
Sbjct: 341 QVINKMNMKGVQIAYGMTETSPVST--------------------QTGANDSIEKRVSTV 380
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ G+ +G + TRG VML+YW+ A W+ TGD
Sbjct: 381 GRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATAEAIDEAGWMHTGD 440
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E ++
Sbjct: 441 LATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKYGEELI 500
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L + + D ++ E LR++C+ K +T FK PR F + FP+T
Sbjct: 501 AWVKL------NSTAGD---------VTGEELREYCKGK-ITHFKIPRYFKFVDE-FPMT 543
Query: 310 STGKIRRDEVRR 321
TGKI++ ++R
Sbjct: 544 VTGKIQKFKMRE 555
>gi|453070112|ref|ZP_21973364.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761758|gb|EME20057.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 512
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 62/336 (18%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+A ++G VF+P F ++ LEAV+++ T++ VP ++ ++ K G D
Sbjct: 219 LAQSLMGGTQVFVPNFSPRTFLEAVDRYRPTTVGLVPTML----QMLVAHKNETGEDATT 274
Query: 58 ----SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 113
SV+ + G + L+ + FP + YGMTET+ +++ P G
Sbjct: 275 YDLSSVRILRYGASPISPTLLGQVMQMFPNSSFAQGYGMTETA----HISMLSPADHLEG 330
Query: 114 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRY 168
G++ ++ G+ PH ELK+ S VG I+T G+HVML Y
Sbjct: 331 ------GDLLRSA---------GRALPHCELKIVDPAGSELPPGEVGEIVTFGSHVMLGY 375
Query: 169 WDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 224
W+ KP S EV W+ TGD G +D G +++V R I +GGENVY EVE
Sbjct: 376 WN----KPKESA-EVLRSGWMHTGDAGYLDARGYLFIVDRIKDMIVTGGENVYSTEVENA 430
Query: 225 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 284
L QH + V+G+ +A+ E V A V LR + +++ D+ LR H
Sbjct: 431 LAQHESVAACSVIGLPDAQWGERVHAVVVLRHGF---DADADE-------------LRAH 474
Query: 285 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ + G+K+PR F + PL++ GK+ + ++R
Sbjct: 475 VKTL-IAGYKSPRTF-QFVDALPLSAAGKVLKRDLR 508
>gi|421872046|ref|ZP_16303665.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372458658|emb|CCF13214.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 528
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 49/325 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L VGA + LE VE++ T L P + +A L + S++K
Sbjct: 236 LYVGASGTILEHAAPALMLETVERYGATQLFCPPTVW--IALLRSEDFAARNLSSLQKCY 293
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P E++KE P++KL + YG TE + T + +D +T
Sbjct: 294 YGAAIMPVEIIKELGMRLPQSKLYNFYGQTEIAPLATVLKPHDQLRKTGS---------- 343
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAKPS 177
GKPA HVE K+ + + H+G I+ R +H+ML Y+ D+ + +
Sbjct: 344 -----------AGKPALHVETKIVDESGNEVPIGHIGEIVHRSSHIMLGYFKDEEKTRSA 392
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
G W +GD+GS+D+ G + +V R+ IK+GGENV E+E + QHP + + V+
Sbjct: 393 FQGG--WFHSGDLGSMDEEGYITVVDRKKDMIKTGGENVASREIEEWIYQHPKVSEVAVI 450
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + E V A V +N + + +ELL Q C+ K L+ FK P+
Sbjct: 451 GIPHPYWIEAVTAIVV---------ANAGEEIETEELL-------QFCK-KGLSSFKVPK 493
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
FV+ P +GKI + E+RR+
Sbjct: 494 -FVVVTDQLPRNPSGKIVKRELRRQ 517
>gi|170585217|ref|XP_001897382.1| AMP-binding enzyme family protein [Brugia malayi]
gi|158595208|gb|EDP33778.1| AMP-binding enzyme family protein [Brugia malayi]
Length = 631
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 42/324 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + + C P F++ +AL+A+ + T++ P + D+ + K+ S+
Sbjct: 307 ACVHLQTCVFPAPSFDALAALQAIHEERCTAVYGTPTMYIDMLNHPQYKQY--DCTSITS 364
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + L YG TETS ++FM+L D E P + ++ G
Sbjct: 365 GFVAGAPCPIALCQRLVSELGMRDLQVCYGTTETSP-VSFMSLRD---EQPEERIKSVGY 420
Query: 122 VTPN---SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
+ + +V +G+ + + G +L RG VM YW+
Sbjct: 421 IMDHLESAVVDSEGIILPR--------------GERGEVLVRGYSVMKYYWNNERQTKEE 466
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
T + W TGDIG I + G++ +VGR+ I GGEN+YP E+E L +HP I + VVG
Sbjct: 467 ITADRWYHTGDIGVIHENGSLSIVGRKKDMIVRGGENIYPLEIEQYLFRHPKIEDVQVVG 526
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R E+V A +RLR+S ++ E +R C+ + + FK PR
Sbjct: 527 VPDERYGEVVCAWIRLRDSAG---------------DITEEDIRDFCKGR-IAHFKIPR- 569
Query: 299 FVLWRK--PFPLTSTGKIRRDEVR 320
++L++K FPLT TGKI++ E+R
Sbjct: 570 YILFKKENEFPLTVTGKIKKYEIR 593
>gi|355568519|gb|EHH24800.1| hypothetical protein EGK_08523, partial [Macaca mulatta]
Length = 639
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + + L P + D+ + + D
Sbjct: 344 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYDIS 399
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N L+ AYG TE S P
Sbjct: 400 TMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PV 440
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 441 TFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELCIRGYCVMLGYWGE 499
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 500 PQKTGEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKV 559
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL++ + ++E ++ C+ K ++
Sbjct: 560 QEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTAEEMKAFCKGK-IS 602
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 603 HFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 637
>gi|296270056|ref|YP_003652688.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092843|gb|ADG88795.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 544
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 152/328 (46%), Gaps = 46/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
G+C V P F+ ++ L AVE+ TSL VP + +A L + S++ +
Sbjct: 245 GSCVVLPAPGFDPEATLRAVERERCTSLYGVPTMF--IAELGHPEFASFDLSSLRTGIMA 302
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK +++ YGMTETS T T T G +
Sbjct: 303 GSPCPVEVMKRVVADMHMSEVAICYGMTETSPVSTM------TRRTDGLARRT------- 349
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E+K+ + VG + TRG VML YW+Q A
Sbjct: 350 -------ETVGRVMPHIEVKIVDPETGRTVPRGQVGELCTRGYSVMLGYWEQPEATAEAI 402
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++D+ G V +VGR + GGEN+YP E+E L HP I + V+G+
Sbjct: 403 DRARWMHTGDLATMDEEGYVNIVGRIKDMVIRGGENIYPREIEEFLYTHPDIADVQVIGV 462
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A + +R + L++E LR+ C + L +K PR +
Sbjct: 463 PDEKYGEELMAWIIMRPGAE---------------PLTAERLREFCAGR-LAHYKIPR-Y 505
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
V FP+T TGKIR+ E+R + + L
Sbjct: 506 VHVVDSFPMTVTGKIRKVEMREQAIEIL 533
>gi|383315473|ref|YP_005376315.1| acyl-CoA synthetase [Frateuria aurantia DSM 6220]
gi|379042577|gb|AFC84633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frateuria
aurantia DSM 6220]
Length = 569
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 50/336 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
MA + GAC V IP F+ + L+AV T+L VP + +A L + S
Sbjct: 269 MAAVTHGACMV-IPGEGFDVLATLQAVAAERCTALHGVPTMF--IAELEHPRFHEFDLSS 325
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ N + AYGMTETS P +
Sbjct: 326 LRTGIMAGSTCPIEVMRRVVNEMHMRDITIAYGMTETS-------------------PVS 366
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 172
F ++ + + + + VG+ PH+E+K+ D H+ G + TRG VML YWD
Sbjct: 367 FQSIPADPLAR-RVESVGRVHPHLEVKLV-DELGHIVPRGVPGELCTRGYSVMLGYWDDR 424
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ W+ TGD+ +DD G +VGR I GGEN+YP E+E L HP I
Sbjct: 425 IRTAEAIDRGGWMHTGDLAVLDDEGYARIVGRLKDMIIRGGENIYPREIEEFLYTHPAIK 484
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ + G+A+ R E V A ++LRE C S E L+ +CR +++
Sbjct: 485 DVQIFGVADQRFGEQVCAWIQLRE-------GCTT---------SVEELQHYCR-RHIAY 527
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K P + + FP+T TGK+++ +R + LK
Sbjct: 528 YKVPH-HIRFVDSFPMTVTGKVQKYLMRETMERELK 562
>gi|444305385|ref|ZP_21141168.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
gi|443482303|gb|ELT45215.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
Length = 559
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +ALEAV+ TSL VP + +A L +++ + G P E+MK
Sbjct: 279 FSPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFATYDLSTLRTGVMAGSPCPVEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT TL+ H+ + V
Sbjct: 337 RVISDMHMKDVAICYGMTETSPVST-MTRQGDTLQ-----------------HRTE--TV 376
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ P +E +V S V G + TRG VM YW+Q V + W+ TGD
Sbjct: 377 GRTMPRLESQVIDPASGDVLERGEIGELCTRGYAVMAGYWNQPEKTAEVIDADGWMHTGD 436
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +DD G V + GR + GGEN+YP E+E L HP I + V+G+ + + E ++
Sbjct: 437 LALMDDDGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPAIQDVQVIGVPDEKYGEELM 496
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ L K E L ++ + CR NL +K PR +V R FP+T
Sbjct: 497 ACIIL---------------KPGEEPLDADAVAGFCR-GNLAHYKIPR-YVEVRDSFPMT 539
Query: 310 STGKIRRDEVRREVMSHL 327
+GKIR+ ++R+E + L
Sbjct: 540 VSGKIRKVQMRKEAVERL 557
>gi|419961133|ref|ZP_14477142.1| AMP-binding domain protein [Rhodococcus opacus M213]
gi|414573454|gb|EKT84138.1| AMP-binding domain protein [Rhodococcus opacus M213]
Length = 545
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ K+ L+AVE TSL VP + +A L S++ + G P E+
Sbjct: 262 PSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS ++ T D T++ +
Sbjct: 320 MKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 359
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 360 TVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 420 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ VR+++ + L + +R+ C K L +K P+ +V FP
Sbjct: 480 LMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFP 522
Query: 308 LTSTGKIRRDEVRREVMS 325
+T TGK+R+ E+R + +
Sbjct: 523 MTVTGKVRKVEMREQSLD 540
>gi|421595874|ref|ZP_16039823.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404272017|gb|EJZ35748.1| AMP-binding domain protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 469
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 156/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + +GA V+ + F+ + L +EQ T+L VP + +A L + S+
Sbjct: 169 LASVTLGAAMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHPEFKAFNLKSL 226
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS ++F + + LE
Sbjct: 227 RTGIMAGAPCPIEVMKRVNSEMNMREVTIAYGMTETSP-VSFQSAVNDPLER-------- 277
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ PHVE+KV V G + TRG VML YW++
Sbjct: 278 -----------RVSTVGRIHPHVEVKVVDLEGRIVKRGQRGELCTRGYSVMLGYWEEKEK 326
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGD+ ++DD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 327 TADVLDANGWMHTGDLATLDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 386
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A++R E + A +R+R Q L++E +R C E + K
Sbjct: 387 QIFGVADSRYGEELCAWIRVRSGEQ----------------LTAEDVRAFC-EGQIAHNK 429
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + FP+T TGKI++ +R EV L
Sbjct: 430 IPR-YVEFVDEFPMTVTGKIQKFLMRDEVEQRL 461
>gi|357410305|ref|YP_004922041.1| AMP-dependent synthetase/ligase [Streptomyces flavogriseus ATCC
33331]
gi|320007674|gb|ADW02524.1| AMP-dependent synthetase and ligase [Streptomyces flavogriseus ATCC
33331]
Length = 535
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 145/321 (45%), Gaps = 46/321 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AVE+ TSL VP + +A L S++ +
Sbjct: 249 GACIVIPAPAFEPAAVLAAVERERCTSLYGVPTMF--IAELALPGFASYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS T T D LE
Sbjct: 307 GSPCPVEVMKRVVAEMHMDEVSICYGMTETSPVST-QTRRDDDLER-------------- 351
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YWDQ V
Sbjct: 352 -----RTGTVGRVMPHIEVKVIDPVTGVTLPRGEAGELCTRGYSVMLGYWDQPERTAEVV 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I+ + VVG+
Sbjct: 407 DAGRWMHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPKIVDVQVVGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+AR E ++ACV D + ++ L +CRE+ L +K PR
Sbjct: 467 PDARYGEEILACV-------IPLDPADPPTLDE--------LTVYCRER-LAHYKIPREL 510
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
+ + FP+T +GK+R+ E+R
Sbjct: 511 RILQA-FPMTVSGKVRKVELR 530
>gi|126435503|ref|YP_001071194.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126235303|gb|ABN98703.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 491
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 140/313 (44%), Gaps = 44/313 (14%)
Query: 15 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 74
+F + + + VT+ P ++ A L ++ T +++ I G +P+EL+
Sbjct: 222 QFRADAIARTINDCAVTACSLAPTMLH--ALLDHLRATGATLPTLRSIAYGSAAIPAELL 279
Query: 75 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 134
+ A YGMTET ++TF+ PG + H
Sbjct: 280 RTALERL-DVDFHQGYGMTETGGNVTFLG--------PGDHRRGLAG------HPAILAG 324
Query: 135 VGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 194
G+P PHVE+++ DG IL RG V YW S GE WL TGDIG ID
Sbjct: 325 AGRPHPHVEVRIGDDGE-----ILVRGPQVATSYW----RGRSAVDGEGWLATGDIGRID 375
Query: 195 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 254
GN+++V RR + +GGENV EVE VL HP + VVG+ + E V A V
Sbjct: 376 ADGNLYVVDRRRDIVVTGGENVSSREVEDVLTDHPEVESAAVVGVPDEYWGEAVCAVVVA 435
Query: 255 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 314
E +ES L +H R + LTGFK PR VL+ PLT+ GKI
Sbjct: 436 AEGRHPTES----------------ALVEHVRAR-LTGFKRPR-HVLFVDALPLTTNGKI 477
Query: 315 RRDEVRREVMSHL 327
++ VRR S L
Sbjct: 478 DKNRVRRLARSAL 490
>gi|421466015|ref|ZP_15914701.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
gi|400203526|gb|EJO34512.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
Length = 561
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 49/328 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
MV C VF P S+L+A+EQ T+ VP + +A L + S++ +
Sbjct: 273 MVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLSSLRTGIM 326
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 327 AGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------------- 372
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PHVE+K+ V G++ TRG VML YW+ V
Sbjct: 373 ------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVI 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D G + + GR + GGEN++P+E+E L HP + + VVG+
Sbjct: 427 DQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E + AC+ L SE E++RQ+C+E +++ K PR +
Sbjct: 487 PDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISHQKVPR-Y 528
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + FPLT++GK ++ ++R + L
Sbjct: 529 IRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|255318758|ref|ZP_05359984.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|421855790|ref|ZP_16288165.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255304014|gb|EET83205.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|403188799|dbj|GAB74366.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 561
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 49/328 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
MV C VF P S+L+A+EQ T+ VP + +A L + S++ +
Sbjct: 273 MVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLSSLRTGIM 326
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 327 AGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------------- 372
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PHVE+K+ V G++ TRG VML YW+ V
Sbjct: 373 ------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVI 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D G + + GR + GGEN++P+E+E L HP + + VVG+
Sbjct: 427 DQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E + AC+ L SE E++RQ+C+E +++ K PR +
Sbjct: 487 PDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISHQKVPR-Y 528
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + FPLT++GK ++ ++R + L
Sbjct: 529 IRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|34497235|ref|NP_901450.1| AMP-binding protein [Chromobacterium violaceum ATCC 12472]
gi|34103091|gb|AAQ59454.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 562
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 153/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GA VF + F+ S LE V++ T+L VP + +A L + S+
Sbjct: 262 LCCLCRGAAMVFPGEGFDPLSVLETVQEERCTALHGVPTMF--IAMLDHPRFAEFDLSSL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + A++ YGMTETS P +
Sbjct: 320 RTGIMAGSPCPVEVMRRVIDRMHMAEVTICYGMTETS-------------------PVSL 360
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + Q VG PHVELK+ V G + RG VML YW+
Sbjct: 361 QSATDTPLEQRVST-VGSAHPHVELKIVDAEGGVVPRGQSGELCVRGYSVMLGYWEDEAM 419
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E W+ TGD+ S+ + G+V +VGR + GGENVYP E+E L +HP I +
Sbjct: 420 TRAAIDAEGWMHTGDLASMREDGSVNIVGRVKDMVIRGGENVYPREIEEFLYRHPKIQDV 479
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ +AR E + A +RLR+ +E + +R C + + +K
Sbjct: 480 QVIGVPDARYGEELCAWIRLRDGECATEED----------------IRSFC-QGQIAHYK 522
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR ++ + FP+T TGKI++ +RR ++ L
Sbjct: 523 IPR-YIEFVDSFPMTVTGKIQKYLMRRTMVEKL 554
>gi|357589271|ref|ZP_09127937.1| AMP-binding domain protein [Corynebacterium nuruki S6-4]
Length = 569
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 154/328 (46%), Gaps = 41/328 (12%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F +++ LEA TSL+ VP + MA+L L +++ K D ++ + G P
Sbjct: 274 PVFNAENTLEAAHHGQATSLLGVPTMFMAELQLLDHLEEKGKKLDLSRLRTGVMAGTSCP 333
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
++ M+E + +++ YGMTETS + T+ P+
Sbjct: 334 TKTMREIIDILGISEIGICYGMTETSP-VNHQTM-------------------PDDPVTK 373
Query: 131 QGVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+ VG+ PH+E+K+ V R +L RG VM YWD + W+
Sbjct: 374 RVETVGRVGPHIEVKIVDRDGDAVARGVQGELLVRGYSVMQGYWDMPEKTAEAVDADGWM 433
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+G +DD G V + GR + GGEN+YP EVE L +HP + + V+G+ + +
Sbjct: 434 HTGDLGQMDDDGYVQITGRIKDMVIRGGENIYPREVEEFLYEHPDVADVQVIGVPDEKYG 493
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A + L D++ + L + +V R C K L FK P+ +V
Sbjct: 494 EELMAWIIL----------SDEAREAGRTLTAGDV-RGFCDGK-LARFKVPK-YVHVTDS 540
Query: 306 FPLTSTGKIRRDEVRREVMSHLKSLPSN 333
FP+T +GK+R+ E+R + + L P +
Sbjct: 541 FPMTISGKVRKVEMREKAIGILGMYPMD 568
>gi|397736475|ref|ZP_10503157.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927665|gb|EJI94892.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 545
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ K+ L+AVE TSL VP + +A L S++ + G P E+
Sbjct: 262 PSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS ++ T D T++ +
Sbjct: 320 MKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 359
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 360 TVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 420 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ VR+++ + L + +R+ C K L +K P+ +V FP
Sbjct: 480 LMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFP 522
Query: 308 LTSTGKIRRDEVRREVMS 325
+T TGK+R+ E+R + +
Sbjct: 523 MTVTGKVRKVEMREQSLD 540
>gi|384440097|ref|YP_005654821.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
gi|359291230|gb|AEV16747.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
Length = 548
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 152/332 (45%), Gaps = 54/332 (16%)
Query: 1 MAMLMVGACH-VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M + ++GA V +P+ E K +EA+E+H VT VP + ++ + S+
Sbjct: 258 MNLALLGAAKLVLLPRPEIKPIVEAIEKHGVTLFPGVPTLYVAFNNFPGIEG--RSLKSI 315
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++G LP E + E AKL+ YG+TE S LY P +
Sbjct: 316 RACISGSAPLPLE-VAERFEKLTGAKLVEGYGLTEASPVTHCNPLYGP---------RKL 365
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLA 174
G+V G P P VE KV + VG ++ +G +VM YW+
Sbjct: 366 GSV-------------GLPFPGVEAKVVDEEGKELPPGEVGELILKGPNVMKGYWN---- 408
Query: 175 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+P S + WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QHP +
Sbjct: 409 RPEESQKTLKDGWLFTGDLAKMDPDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAV 468
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
VVG+ + E V A + L++ ++ S D + CR+ NL
Sbjct: 469 QEAAVVGVPDPYRGETVAAFIVLKDEYKGKVSEKD--------------IETFCRQ-NLA 513
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
+K PR+ + +R P +S GKI + E+ +EV
Sbjct: 514 AYKVPRI-LQFRDTLPKSSVGKILKRELAKEV 544
>gi|424851538|ref|ZP_18275935.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666203|gb|EHI46274.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 546
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ K+ L+AVE TSL VP + +A L S++ + G P E+
Sbjct: 263 PSFDPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS ++ T D T++ +
Sbjct: 321 MKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 360
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 361 TVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 421 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ VR+++ + L + +R+ C K L +K P+ +V FP
Sbjct: 481 LMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFP 523
Query: 308 LTSTGKIRRDEVRREVMS 325
+T TGK+R+ E+R + +
Sbjct: 524 MTVTGKVRKVEMREQSLD 541
>gi|108799860|ref|YP_640057.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119868970|ref|YP_938922.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108770279|gb|ABG09001.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695059|gb|ABL92132.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 491
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 140/313 (44%), Gaps = 44/313 (14%)
Query: 15 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 74
+F + + + VT+ P ++ A L ++ T +++ I G +P+EL+
Sbjct: 222 QFRADAIARTINDCAVTACSLAPTMLH--ALLDHLRATGATLPTLRSIAYGSAAIPAELL 279
Query: 75 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 134
+ A YGMTET ++TF+ PG + H
Sbjct: 280 RTALERL-DVDFHQGYGMTETGGNVTFLG--------PGDHRRGLAG------HPAILAG 324
Query: 135 VGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 194
G+P PHVE+++ DG IL RG V YW S GE WL TGDIG ID
Sbjct: 325 AGRPHPHVEVRIGDDGE-----ILVRGPQVATSYW----RGRSAVDGEGWLATGDIGRID 375
Query: 195 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 254
GN+++V RR + +GGENV EVE VL HP + VVG+ + E V A V
Sbjct: 376 ADGNLYVVDRRRDIVVTGGENVSSREVEDVLTDHPEVESAAVVGVPDEYWGEAVCAVVVA 435
Query: 255 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 314
E +ES L +H R + LTGFK PR VL+ PLT+ GKI
Sbjct: 436 AEGRHPTES----------------ALIEHVRAR-LTGFKRPR-HVLFVDALPLTTNGKI 477
Query: 315 RRDEVRREVMSHL 327
++ VRR S L
Sbjct: 478 DKNRVRRLARSAL 490
>gi|148683592|gb|EDL15539.1| mCG63314 [Mus musculus]
Length = 615
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 156/331 (47%), Gaps = 39/331 (11%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M +M GA + P F K ALEA+ + T L P + D+ + + D
Sbjct: 320 MVSMMHGATLLLSFPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFT 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P EL++ N +L+ YG TE +S +TFM + TLE Q
Sbjct: 376 SIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE---QKAG 431
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G + P++ Q V G+ L V G + RG VM YW +
Sbjct: 432 SVGRIMPHTKAQIVNVETGE---LTNLNV-------PGELYIRGYCVMQGYWGEPQKTFE 481
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W TGDI S+D+ G +VGR I GGEN+YP E+E L+HP + VV
Sbjct: 482 TVGQDKWYRTGDIASMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFLKHPQVQEAQVV 541
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+ L+ ++E ++ C+ K ++ FK PR
Sbjct: 542 GVKDKRMGEEICACIPLKSGETT----------------TAEEIKAFCKGK-ISHFKIPR 584
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 585 -YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|150014678|gb|ABR57200.1| Acs [Pseudomonas putida]
Length = 557
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 148/319 (46%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T D LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGPDDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV +DG++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLENKVVDADGNTVPRGEIGELCTRGYSVMLGYWNNLKATADSIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE E LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHTASE----------------EALREWARAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R ++ L S
Sbjct: 538 TGKVQKFRMREISVAELSS 556
>gi|302555107|ref|ZP_07307449.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
gi|302472725|gb|EFL35818.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 147/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ K+ L+AV++ TSL VP + +A L S++ +
Sbjct: 240 GACIVIPAPSFDPKATLDAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 297
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 298 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE--------------- 341
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YWD+
Sbjct: 342 --HRTG--TVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWDEPEKTAEAV 397
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HPGI + +VG+
Sbjct: 398 DAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPGIQDVQIVGV 457
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ E V+ACV R+ + E LR C E L +K P RL
Sbjct: 458 PHEHYGEEVLACVIARDPADPP---------------TLEGLRAFC-EGRLAHYKIPSRL 501
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 502 QLL--DTFPMTVSGKVRKVELR 521
>gi|262378975|ref|ZP_06072132.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|262300260|gb|EEY88172.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 561
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 49/328 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
MV C VF P S+L+A+EQ T+ VP + +A L + S++ +
Sbjct: 273 MVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLSSLRTGIM 326
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 327 AGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET------------- 372
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PHVE+K+ V G++ TRG VML YW+ V
Sbjct: 373 ------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKEVI 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +D G + + GR + GGEN++P+E+E L HP + + VVG+
Sbjct: 427 DQTGWMHTGDLAEMDQEGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVVGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E + AC+ L SE E++RQ+C+E +++ K PR +
Sbjct: 487 PDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISHQKVPR-Y 528
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + FPLT++GK ++ ++R + L
Sbjct: 529 IRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|284989388|ref|YP_003407942.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284062633|gb|ADB73571.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 551
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L S++ + G P E+
Sbjct: 260 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELALPDFGTYDLSSLRTGIMAGSPCPVEV 317
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + ++ YGMTETS T T D L+ +
Sbjct: 318 MKRVVSEMGMTEVTICYGMTETSPVST-QTGADDDLDR-------------------RTS 357
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + G TRG VML YWD+ V W+ T
Sbjct: 358 TVGRVHPHLEVKVIDPETGLTVPRGTPGEFCTRGYSVMLGYWDEPEKTAEVIDAARWMHT 417
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G + +VGR + GGENVYP EVE L HP ++ V+G+ + R E
Sbjct: 418 GDLAVMDAEGYLNIVGRIKDMVIRGGENVYPREVEEFLYTHPDVVDAQVIGVPDERFGEE 477
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VRLRE + L+ E LRQ C + L +K PR +V FP
Sbjct: 478 LMAWVRLREGAE---------------PLTPEALRQFCSGR-LAHYKIPR-YVKIVDGFP 520
Query: 308 LTSTGKIRRDEVR 320
+T TGK+R+ E+R
Sbjct: 521 MTVTGKVRKVEMR 533
>gi|149724572|ref|XP_001502813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Equus caballus]
Length = 615
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 52/323 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLP 70
P F+ K ALEA+ + + L P + D+ + + D + +L G G P
Sbjct: 334 PSFDGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-ISAMLGGVIAGSPAP 388
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
EL++ N +L+ AYG TE +S +TFM + T+ Q
Sbjct: 389 PELIRAIINKLNMKELVVAYGTTE-NSPVTFMNFAEDTV-------------------QE 428
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ VG+ PH E ++ + + + G + RG VML YW + W
Sbjct: 429 KAESVGRVMPHTEAQIVNTETGTLTKLNTPGELWIRGYCVMLGYWGDPQKTVEAVGQDKW 488
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGDI ++D+ G +VGR I GGEN+YP E+E HP + + VVG+ + RL
Sbjct: 489 YRTGDIATMDEKGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDKRL 548
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + AC+RL++ + ++E ++ C+ K + FK PR ++++
Sbjct: 549 GEEICACIRLKKGEK----------------TTAEEIKAFCKGK-IAHFKIPR-YIVFVT 590
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
+PLT +GKI++ ++R ++ HL
Sbjct: 591 EYPLTVSGKIQKFKLREQMEQHL 613
>gi|148652394|ref|YP_001279487.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571478|gb|ABQ93537.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 587
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 156/326 (47%), Gaps = 48/326 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ ML GA V+ F+ S L+A+ + T L VP++ LA L S+
Sbjct: 291 LTMLSHGATLVYPSSSFDPLSVLQAINEEKCTVLHAVPSMF--LAILNHPDFARFDLSSL 348
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++GG P ELM+ ++L AYGMTETS T
Sbjct: 349 RTGVSGGASCPRELMQRIIKQMHMSELTIAYGMTETSPKAT------------------- 389
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQFL 173
P + + + VG PH+E+KV +G + VG ILT+G VM YW+ +
Sbjct: 390 -QTLPTTEFEKRIATVGVVQPHLEVKVVDPLNGQTLPIGEVGEILTKGYAVMQGYWNDPV 448
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
K + + + W+ TGD+GS+D+ G + +VGR I GGEN+YP EVE L +HP I
Sbjct: 449 -KTAEAIVDGWMHTGDLGSMDEHGYITVVGRSKDMIIRGGENIYPIEVENFLYRHPKIAD 507
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ +VG+ +A E++ A W D++ L+ + +R C + + F
Sbjct: 508 VQIVGVPDAHYGEVLAA---------WIIPKADET-------LTEQEVRDFCYNQ-IAHF 550
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEV 319
K P ++ + + +P+T TGKI++ ++
Sbjct: 551 KIPT-YIRFVEQYPMTVTGKIQKFKI 575
>gi|291295976|ref|YP_003507374.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
gi|290470935|gb|ADD28354.1| AMP-dependent synthetase and ligase [Meiothermus ruber DSM 1279]
Length = 561
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 55/337 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E K +EA+E+H VT VP + ++K G +VK +
Sbjct: 272 LAAGYKLVLLPRPEVKPCIEAIEKHGVTHFPGVPTLYIGFINFPGIEKRKVG--TVKVCI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K+ + KL+ YG+TE + +
Sbjct: 330 SGSAALPVEVAKK-FEALTGGKLVEGYGLTEAAPCT---------------------HCN 367
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P S + G +G P P V+ K+ + VG + RG ++ML YW +P
Sbjct: 368 PLSGQRKMG-SIGIPMPGVDAKILDENLHELPPGEVGELAVRGPNIMLGYWQ----RPDE 422
Query: 179 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
++ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL HPG+
Sbjct: 423 TSKTIKIDWLLTGDMARMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLFAHPGVAEAA 482
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ + E V A + + L+ E L ++CRE NL +K
Sbjct: 483 VVGLPDEYRGETVAAFIVPKPGVN----------------LTQEELDKYCRE-NLAAYKV 525
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 332
PR++ +R P ++ GK+ R E+R + + + S
Sbjct: 526 PRIYE-FRSELPKSAVGKVLRRELREAALKERQKVGS 561
>gi|408826805|ref|ZP_11211695.1| AMP-binding domain protein [Streptomyces somaliensis DSM 40738]
Length = 541
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 146/327 (44%), Gaps = 46/327 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GAC V P F+ + L AV+Q TSL VP + +A L S+
Sbjct: 246 LAAVSHGACIVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSL 303
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 304 RTGIMAGSPCPVEVMKRVVTEMNMAEVSICYGMTETSP-VSTQTRRDDDLER-------- 354
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFL 173
+ VG+ PHVE+KV S G + TRG VML YWD+
Sbjct: 355 -----------RTGTVGRVLPHVEVKVVDPASGTTLPRGEAGELCTRGYGVMLGYWDEPE 403
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ + + G + +VGR I GGENVYP E+E L HP +
Sbjct: 404 RTAEAVDRGRWMHTGDLAVMREDGYLQIVGRIKDMIIRGGENVYPREIEEFLYSHPKVAD 463
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + R E V+ACV R+ + E + +CR++ L +
Sbjct: 464 VQVVGVPDERYGEEVLACVIPRDPADPP---------------TYEEIAAYCRDR-LAHY 507
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR + FP+T +GK+R+ E+R
Sbjct: 508 KVPRRVEVL-DAFPMTVSGKVRKVELR 533
>gi|254488273|ref|ZP_05101478.1| acyl-CoA synthase [Roseobacter sp. GAI101]
gi|214045142|gb|EEB85780.1| acyl-CoA synthase [Roseobacter sp. GAI101]
Length = 534
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 146/327 (44%), Gaps = 40/327 (12%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V PKFE L +E +T++ VP ++ + R + S++ +
Sbjct: 231 LAYGTTMVVQPKFEVVDTLRMIEAQKITTMTMVPTMLNMVMNHPRFPEF--DFSSIRVLT 288
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P LM+ A + P YG+TETS L+ LE +P GN
Sbjct: 289 YGASPMPVTLMERAIAAIPGITFCQGYGLTETSPVLS-------VLEPADHIP---GNPM 338
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
+ + VG+P + +L++ + V G I+ RG VM YW++
Sbjct: 339 LDKLS-----TVGRPILYSDLRIVDADDNPVPTGTPGEIVVRGPQVMNGYWNRPQETAHA 393
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G + TGD G +D G + + GR I SGGENVYP E E L +HP + V G
Sbjct: 394 MRGG-FFHTGDAGVMDADGYLTIAGRTKEMIISGGENVYPIETENALSKHPAVAQAAVFG 452
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +A+ EMV A V L + SE L CRE+ + +KAPR
Sbjct: 453 VPHAKWGEMVYAAVALHDGKPASEDE----------------LIAFCRER-IAHYKAPRG 495
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+W+ P PL++T K+ + ++ +V++
Sbjct: 496 MTIWQGPLPLSATNKLDKMTIKAQVLA 522
>gi|423074972|ref|ZP_17063691.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
gi|361853921|gb|EHL06036.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
Length = 528
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 165/343 (48%), Gaps = 61/343 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+ +++ GA V F+ L +EQ VT ++ +P +T +R+ RD
Sbjct: 222 LCVMVTGAQFVICDGFDPVEILRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDV 276
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
SVK + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 277 SSVKVVHTSAGGTSPAIIQKMAEAFPNCEVYYGWGQTETGAG----TVHRITREM----- 327
Query: 117 QAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD 170
++H P+ +G+P P +L++ + VG + +G + Y+
Sbjct: 328 ---------ALHHPEKTQSIGRPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYK 378
Query: 171 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
Q P ++ G + W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +
Sbjct: 379 Q----PELTDGTITDGWTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRK 434
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
HP ++ V+G+ + E V+A V+LR + + ++ +++HC+
Sbjct: 435 HPAVLDCSVIGVPDQTFGEAVMAVVKLRSGYTATAAD----------------IQEHCK- 477
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 327
++L+ +K PR +V + FP+ S GKI++ +R RE+ SH
Sbjct: 478 RDLSSYKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYREIYSHF 519
>gi|390463546|ref|XP_002748483.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Callithrix jacchus]
Length = 704
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ L P + D+ + + D +
Sbjct: 409 MVCLMYGATLILSSPIFNGKKALEAISTERGCFLYGTPTMFVDILN----QPNFSSYD-I 463
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ + +L+SAYG TE +S +TFM+ + T+E +
Sbjct: 464 STVYGGVIAGSPAPPELIRAIIDKINMKELVSAYGTTE-NSPVTFMSFPEDTVEQKAE-- 520
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
VG+ PH E ++ + + + G + RG VML YW
Sbjct: 521 -----------------SVGRVMPHTEARIMNMEAGTLAELNTPGELFIRGYCVMLGYWG 563
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ V + W TGDI +D+ G +VGR I GGEN+YP E+E HP
Sbjct: 564 EPQKTEEVVGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFFHTHPK 623
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL KN E E+ + C+ K +
Sbjct: 624 VQEVQVVGVKDYRMGEEICACIRL---------------KNGEKTTPEEI-KAFCKGK-I 666
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 667 SHFKIPR-YIVFVTDYPLTVSGKVQKFKLREQMERHL 702
>gi|379734139|ref|YP_005327644.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
gi|378781945|emb|CCG01599.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
Length = 551
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 53/324 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L AV+ TSL VP + +A L S++ + G P E+
Sbjct: 260 PGFDPALTLRAVQDERCTSLYGVPTMF--IAELGLPNFAEYDLSSLRTGIMAGSPCPVEV 317
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK ++ YGMTETS T T D LE +
Sbjct: 318 MKRVVAEMGMTEVTICYGMTETSPVST-QTGADDDLER-------------------RTA 357
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV---- 183
VG+ PH+E+KV + G TRG VML YW++ P V+ +
Sbjct: 358 TVGRVHPHLEVKVVDPATGLTVPRGTPGEFCTRGYSVMLGYWEE----PDVTAKSIDSAR 413
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
W+ TGD+ +D+ G + +VGR + GGENVYP E+E L HP I+ V+G+ + R
Sbjct: 414 WMHTGDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREIEEFLYTHPDIVDAQVIGVPDER 473
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E ++A VRLRE + L+++ L+++C K L +K PR +V
Sbjct: 474 YGEELMAWVRLREGAE---------------PLTADALKEYCSGK-LAHYKVPR-YVKVV 516
Query: 304 KPFPLTSTGKIRRDEVRREVMSHL 327
+ FP+T TGKIR+ E+R+ + L
Sbjct: 517 EEFPMTVTGKIRKVEMRQVSVEEL 540
>gi|254776094|ref|ZP_05217610.1| putative acyl-CoA dehydrogenase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 507
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 49/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 219 LAAARLGGASVILPALDLDTLLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGNDVSR 274
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 275 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 316
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
V P+ VG P V+L + D VG ++TRG +V YW++ A
Sbjct: 317 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGGNVTAGYWNRPQATA 373
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 374 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 432
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 433 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 473
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ + P P + GK+ + +R +V
Sbjct: 474 QYVTIADGPLPRNAGGKLLKARLRDQV 500
>gi|46199401|ref|YP_005068.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46197026|gb|AAS81441.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 560
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 151/324 (46%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E K+ +EA+E+H VT VP + ++K + S++ L
Sbjct: 273 LFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICL 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K A+LI YG++E S +T +P L G +
Sbjct: 331 SGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNPVL----------GLIK 375
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSV 178
S+ G P P V+ KV + VG + +G +VM YW++ +
Sbjct: 376 KGSI--------GMPFPSVDAKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQK 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 427 TLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 487 VPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 532 -IQFRESLPKSSVGKILRRELREE 554
>gi|325675420|ref|ZP_08155104.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
gi|325553391|gb|EGD23069.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
Length = 550
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P FE + L AV+ TSL VP + +A L ++ + G P E+
Sbjct: 267 PAFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLSCLRTGIMAGSPCPVEV 324
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS P + +S+ Q +
Sbjct: 325 MKQVIERMGMAEVSICYGMTETS-------------------PVSLQTRRDDSIDQ-RVS 364
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 365 TVGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHT 424
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 425 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 484
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ +R+RE Q L + +R+ C + L +K PR +V FP
Sbjct: 485 LMVWIRMREGAQ---------------PLDVDKVREFCTGR-LAHYKIPR-YVHLVDEFP 527
Query: 308 LTSTGKIRRDEVR 320
+T TGKIR+ E+R
Sbjct: 528 MTVTGKIRKVEMR 540
>gi|170722114|ref|YP_001749802.1| acyl-CoA synthetase [Pseudomonas putida W619]
gi|169760117|gb|ACA73433.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 557
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 48/323 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGAFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS ++ T + LE VT V
Sbjct: 336 RVIDEMHMAQVQIAYGMTETSP-VSLQTGANDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV +DG++ +G + TRG +VML YW+ A GE W+ TGD+
Sbjct: 376 GRTQPRLESKVIDADGNTVPRGDIGELCTRGYNVMLGYWNNPEATAESIDGEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL Q ++S+ LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHQ----------------VASDELREWARAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKSLPSN 333
TGK+++ +R ++SLP
Sbjct: 538 TGKVQKFRMRE---ISIESLPEQ 557
>gi|410697740|gb|AFV76808.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 548
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 51/327 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
L+ GA V +P+ E +EA+E+H VT VP + + +GR+ SV+
Sbjct: 262 LLGGAKLVLLPRPEIGPIVEAIEKHKVTLFPGVPTLYVAFNNFPGI----EGRNLRSVRA 317
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++G LP E + E AKL+ YG+TE S LY + G+
Sbjct: 318 CISGSAPLPLE-VAERFEKLTGAKLVEGYGLTEASPVTHCNPLYG---------KRKLGS 367
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKP 176
VG P P VE KV + VG ++ +G +VM YW++ +
Sbjct: 368 -------------VGLPFPGVEAKVVDEEGKEVPFGEVGELIVKGPNVMKGYWNR-PDET 413
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S + + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + V
Sbjct: 414 SRALKDGWLFTGDLARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAV 473
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + E V A + L+ +Q + D L CRE NL +K P
Sbjct: 474 VGVPDPYRGETVAAFLVLKPEYQGKVTEKD--------------LEAFCRE-NLAAYKVP 518
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
R+ + +R+ P +S GK+ + E+ +EV
Sbjct: 519 RI-IRFRESLPKSSVGKVLKRELTKEV 544
>gi|429215399|ref|ZP_19206561.1| AMP-binding protein [Pseudomonas sp. M1]
gi|428154626|gb|EKX01177.1| AMP-binding protein [Pseudomonas sp. M1]
Length = 556
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 149/329 (45%), Gaps = 48/329 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GA ++ P FE ++ L AV + T+L VP + +A L ++ S++ +
Sbjct: 268 GATMIYPAPSFEPEATLAAVAEERATALYGVPTMF--IAELDHPRRAEFDLSSLRTGIMA 325
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+M+ N A++ AYGMTETS ++ T D LE VT
Sbjct: 326 GATCPIEVMRRVINEMHMAEVQIAYGMTETSP-VSLQTGPDDELEI---------RVT-- 373
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ P +E K+ DG + G + TRG VML YW+ A
Sbjct: 374 --------TVGRTQPQLESKII-DGDGRIVPRGTIGELCTRGYSVMLGYWNNPQATAEAI 424
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD+ +D+ GNV +VGR I GGEN+YP E+E L H + V+GI
Sbjct: 425 SPARWMLTGDLAVMDEAGNVRIVGRSKDMIIRGGENIYPREIEEFLYTHHAVADAQVIGI 484
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E +VA V+ E E LR C+ + + FK PR F
Sbjct: 485 PDDKYGEELVAWVKFHPGHGVDE----------------EELRAFCKAR-IAHFKVPRYF 527
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+ FP+T TGKI++ +R + L+
Sbjct: 528 RFCDE-FPMTVTGKIQKFRMREISIEELR 555
>gi|403279576|ref|XP_003931323.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Saimiri boliviensis boliviensis]
Length = 572
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 157/330 (47%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + L P + D+ + + D
Sbjct: 277 MVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPDFSSYDIS 332
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S+ GG + EL++ N +L AYG TE +S +TFM L + T+E Q +
Sbjct: 333 SMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE---QKAE 388
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G + P++ + + GK A EL G + RG VML YW +
Sbjct: 389 SVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWGEPRKTEE 438
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP + + VV
Sbjct: 439 VVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVV 498
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL+ + + E ++ C+ K ++ FK PR
Sbjct: 499 GVKDDRMGEEICACIRLKSGEES----------------TPEEIKAFCKGK-ISHFKIPR 541
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
++++ +PLT +GK+++ ++R ++ HL
Sbjct: 542 -YIVFVTEYPLTISGKVQKFKLREQMERHL 570
>gi|386360063|ref|YP_006058308.1| acyl-CoA synthetase [Thermus thermophilus JL-18]
gi|383509090|gb|AFH38522.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
thermophilus JL-18]
Length = 548
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 158/327 (48%), Gaps = 47/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ +
Sbjct: 262 LLGGAKLVLLPRPEIKAIVEAIEKHRVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACI 319
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ E + AKL+ YG+TE S +T +P T + G+
Sbjct: 320 SGSAPLPLEVA-ERFMALTGAKLVEGYGLTEASP----VTHCNPLYGT-----RKLGS-- 367
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 178
VG P P VE KV + VG ++ +G +VM YW++ +
Sbjct: 368 -----------VGLPFPGVEAKVVDEEGKEVPIGEVGELVVKGPNVMKGYWNR-PEETEK 415
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 416 ALKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 475
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+E ++ + D + CR+ NL +K PR+
Sbjct: 476 VPDPYRGETVAAFLVLKEEYRGKVTEKD--------------IEAFCRQ-NLAAYKVPRI 520
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 -IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|433635586|ref|YP_007269213.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
gi|432167179|emb|CCK64690.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
Length = 547
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDQSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|54026121|ref|YP_120363.1| AMP-binding protein [Nocardia farcinica IFM 10152]
gi|54017629|dbj|BAD58999.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 555
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 145/326 (44%), Gaps = 47/326 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
P F+ + L AV TSL VP A++A+L T + +++ + G
Sbjct: 265 PSFDPAATLAAVAAEKCTSLYGVPTMFIAVLAELDTELEKSGAAPDLSTLRTGIMAGSPC 324
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
P E+MK + +++ YGMTETS T +
Sbjct: 325 PVEVMKRVIDRLGMSEVCICYGMTETSPVST--------------------QTRRDDDID 364
Query: 130 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ VG+ PH+E+K+ + G + TRG VML YWD+
Sbjct: 365 RRTATVGRVGPHLEVKIVDPATGRTVPRGEPGELCTRGYSVMLGYWDEPEKTAEAIDAAR 424
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
W+ TGDIG +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + R
Sbjct: 425 WMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDER 484
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E ++A +R+RE + L + +R+ C K L FK PR +V
Sbjct: 485 YGEELMAWIRMREGAE---------------PLDAAAVREFCTGK-LAHFKIPR-YVHVV 527
Query: 304 KPFPLTSTGKIRRDEVRREVMSHLKS 329
+ FP+T TGK+R+ E+R L+S
Sbjct: 528 EEFPMTVTGKVRKAEMRELAREMLQS 553
>gi|239831428|ref|ZP_04679757.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
gi|239823695|gb|EEQ95263.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
Length = 571
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 48/335 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + G+C V IP F+ L+ VE+ T L VP + +A L + S
Sbjct: 271 LACVTHGSCMV-IPNDSFDPFLTLQTVEEEQCTGLHGVPTMF--IAMLDHPDFSRFDLSS 327
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + + ++ AYGMTETS P +
Sbjct: 328 LRTGIMAGSPCPIEVMRRVVSEMHQGEITIAYGMTETS-------------------PVS 368
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFL 173
F + T + + + + VG+ PH+E+K+ +DG G +LTRG VM YW+
Sbjct: 369 FQSSTSDPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAE 427
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I
Sbjct: 428 SSAGAIDDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISD 487
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ + GI + + E++ A V+L + Q SE E L ++CR++ + +
Sbjct: 488 VQIFGIPDRKFGEIICAWVKLHKDAQLSE----------------EDLSEYCRQR-IAHY 530
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P + + FP+T TGKI++ +R+ ++ L+
Sbjct: 531 KVP-AHIRFVDQFPMTVTGKIQKFVMRQAMIEELE 564
>gi|153010019|ref|YP_001371234.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
gi|151561907|gb|ABS15405.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
Length = 562
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 160/338 (47%), Gaps = 54/338 (15%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKG 55
+A + G+C V IP F+ L+ VE+ T L VP + M D R T
Sbjct: 262 LACVTHGSCMV-IPNESFDPLLTLQTVEEEQCTGLHGVPTMFIAMLDHPDFSRFNLT--- 317
Query: 56 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 115
S++ + G P E+M+ + ++++ AYGMTETS
Sbjct: 318 --SLRTGIMAGSPCPIEVMRRVVSEMHQSEITIAYGMTETS------------------- 356
Query: 116 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWD 170
P +F + T + + + + VG+ PH+E+K+ +DG G +LTRG VM YW+
Sbjct: 357 PVSFQSSTTDPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWN 415
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP
Sbjct: 416 DAESSAGAIDDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFSHPA 475
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
I + + GI + + E++ A V+L + Q SE E L ++CR++ +
Sbjct: 476 ISDVQIFGIPDRKFGEIICAWVKLHKDGQLSE----------------EELAEYCRQR-I 518
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K P + + FP+T TGKI++ +R+ ++ L+
Sbjct: 519 AHYKVPA-HIRFVDQFPMTVTGKIQKFVMRQVMIEELE 555
>gi|406575797|ref|ZP_11051487.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
gi|404554795|gb|EKA60307.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
Length = 543
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 147/330 (44%), Gaps = 46/330 (13%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV TSL VP + +A L S++ +
Sbjct: 252 GACMVIPAPSFEPAATLRAVVDERCTSLYGVPTMF--IAELGLRDFADYDLSSLRTGIMA 309
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ +YGMTETS ++ MT D L +
Sbjct: 310 GSTCPVEVMKRVVAEMNMAEVAISYGMTETSP-VSTMTHTDDDLARRTE----------- 357
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E KV + G + TRG VML YW Q
Sbjct: 358 --------TVGRSMPHIESKVVDPVTGVTLPRGETGELCTRGYSVMLGYWQQPDKTAEAI 409
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++D+ G V +VGR + GGEN+YP EVE L HP I + V+G+
Sbjct: 410 DDARWMHTGDLATMDEHGYVEIVGRIKDLVIRGGENIYPREVEEFLYTHPSIADVQVIGV 469
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E ++A V LRE L+ + +R+ +K L +K PR +
Sbjct: 470 PDERYGEELMAWVVLREGVA---------------SLTVDDVREFAADK-LAHYKIPR-Y 512
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
V FP+T TGK+R+ E+R + L++
Sbjct: 513 VHVTDAFPMTVTGKVRKVEMREQAGEILRA 542
>gi|452975963|gb|EME75780.1| AMP-binding domain protein [Bacillus sonorensis L12]
Length = 545
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 155/334 (46%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F + L+ VE T+L VP + +A + S++
Sbjct: 251 LACVTVGATMVPVQEFSPREVLKTVESERCTALHGVPTMF--IAEMNDEDFASYNLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+MK +++ AYG TE S +T ++D
Sbjct: 309 TGIMAGSNCPTEVMKGVIEKMGISEITIAYGQTEASPVITQTRVHDSL------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ + VG+ PH+E+K+ D + V G + TRG HVM Y+ A
Sbjct: 357 --------KRRVETVGRALPHIEVKITDPDNNREVERGRQGELCTRGYHVMKGYYKNPQA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E +L TGD+ +DD G + GR I GGEN+YP E+E L QHP I+ +
Sbjct: 409 TAAAIDDEGFLHTGDLAVMDDDGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPKILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + E V A ++L KN E + E+ R++C+ K + +K
Sbjct: 469 QVVGVPDETFGEEVSAWIKL---------------KNGEHATAEEI-REYCKGK-IARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR V++ FP+T++GK+++ ++R + K
Sbjct: 512 IPR-HVVFVDEFPMTASGKVQKFKLREQAHEMFK 544
>gi|386021952|ref|YP_005939977.1| AMP-binding protein [Pseudomonas stutzeri DSM 4166]
gi|327481925|gb|AEA85235.1| AMP-binding domain protein [Pseudomonas stutzeri DSM 4166]
Length = 560
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 45/295 (15%)
Query: 31 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 90
T + VP + +A L ++ S++ + G P E+MK + A++ AY
Sbjct: 293 TGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAY 350
Query: 91 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 150
GMTETS T T D LE VT VG+ PH+E K+ +
Sbjct: 351 GMTETSPVST-QTSADDDLER---------RVT----------SVGRTQPHLESKIVDEH 390
Query: 151 SS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 205
+ +G + TRG VML YW+ A G W+ TGD+ +DD G + +VGR
Sbjct: 391 GAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTGDLAVMDDEGYIKIVGRN 450
Query: 206 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
I GGENVYP E+E L HP + + V+G+ +++ E +VA V+L Q
Sbjct: 451 KDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQ------ 504
Query: 266 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ +EVLR+ C+ + + FK PR + + FP+T +GK+++ +R
Sbjct: 505 ----------VEAEVLREFCKGR-IAHFKTPR-HIKFVDDFPMTISGKVQKFRMR 547
>gi|379059581|ref|ZP_09850107.1| AMP-binding domain protein [Serinicoccus profundi MCCC 1A05965]
Length = 543
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 159/338 (47%), Gaps = 51/338 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKK-TWKGRD 57
+A GAC V P F+ + L AV + TSL VP + +A+L + R + + +
Sbjct: 244 LAATTHGACMVIPGPGFDPAATLRAVREEQCTSLYGVPTMFIAELELIERSDEVSLEDLA 303
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
SV+ + G P+ +M+ ++ + I YGMTETS T
Sbjct: 304 SVRTGIMAGSLCPASVMRTLIDAGVEEMTI-CYGMTETSPVST----------------- 345
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
P+ + VG+ PH+E+++ + V G T+G VML YWD+
Sbjct: 346 ---QTAPDDPFDAKVGTVGRVMPHLEIQIVDPATREVVPRGTPGEFCTKGYSVMLGYWDE 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
K + + W+ TGDIG +D+ G V + GR I GGENVYP EVE L HP +
Sbjct: 403 -PEKTAEVLQDGWMATGDIGVMDEDGYVEITGRIKDLIIRGGENVYPREVEEFLYTHPDV 461
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R E ++A VRLRE + L++E ++ C +L
Sbjct: 462 VDAQVVGVPDERYGEELMAWVRLREGAE---------------PLTAEAVKDFCT-GSLA 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSH 326
+K PR V + FP+T TGK+R+ E+R E++ H
Sbjct: 506 HYKIPR-HVQVIEEFPMTVTGKVRKVELRERGEELLRH 542
>gi|268558570|ref|XP_002637276.1| Hypothetical protein CBG18959 [Caenorhabditis briggsae]
Length = 624
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ + T DS++
Sbjct: 318 ALTHLQTCVFPAPSFDALAALKAIHEEKCTALYGTPTMFIDMIN--HPEYTKYNYDSIRS 375
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 376 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 431
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 432 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 480
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 481 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQAVEDVHIVGVPD 540
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 541 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 584
Query: 302 WRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 585 FKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 624
>gi|384252016|gb|EIE25493.1| acetyl-CoA synthetase-like protein [Coccomyxa subellipsoidea C-169]
Length = 465
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 125/300 (41%), Gaps = 76/300 (25%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR------------ 48
+A+L GA VF P F + S L+ + H VT+ I VPA++ L +
Sbjct: 146 LAVLAAGATQVFQPVFSAASTLDLIAAHNVTAFIAVPAMVVSLNEAAQSRPAAQAHAVNS 205
Query: 49 ------------------------------VKKTWKGRDSVKKILNGGGGLPSELMKEAT 78
V T V++IL GGG LP L +
Sbjct: 206 HGEPSAMVGPAPDLAAQSAGPAHAHPSPRGVCPTGSALTRVQRILLGGGELPEHLQRRLR 265
Query: 79 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ-----AFGNVTPNSVHQPQGV 133
FP+A ++AYGMTE SS+TF ++ E G P A + + +G+
Sbjct: 266 LLFPRAICMTAYGMTEACSSITFRPMHA---EASGPFPDYLRTSAASRGSASQAAVAEGI 322
Query: 134 CVGKPAPHVELKV-CSDGSSH-------------------------VGRILTRGAHVMLR 167
CVG P P +E+ V CS + G +LTRG HVML
Sbjct: 323 CVGHPPPGIEVAVLCSAACAESAVASGGWVGGAEQAVTRIATSAGAAGEVLTRGPHVMLG 382
Query: 168 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
YWD A WL TGD+G+ D GG +WL+GR ++SG ENV VE VLLQ
Sbjct: 383 YWDDPAASGRAFLPGGWLKTGDLGAFDAGGALWLLGRLKDVVRSGSENVNGAAVERVLLQ 442
>gi|323487936|ref|ZP_08093192.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
gi|323398360|gb|EGA91150.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
Length = 547
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 46/332 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + V +FE K L+ V+ T L VP + +A L + + +++
Sbjct: 250 MAAVTHSTTMVIAEQFEPKRVLQMVQDEKCTGLHGVPTMF--IAELNHPEFSTFDTSTLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ N +++ AYG TE+S +T T D +E
Sbjct: 308 TGIMAGSSCPIEVMKKVINEMGASEITIAYGQTESSPVIT-QTRADDDIEK--------- 357
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
+ VGKP VE+K+ + G + TRG HVM Y+ A
Sbjct: 358 ----------RVSTVGKPHAGVEVKIIDPATGDEVELGLPGELCTRGYHVMSGYYKNEDA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGDI D+ G + + GR + GGEN+YP E+E L QHP ++ +
Sbjct: 408 TKMAIDSEGWLHTGDIAVEDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHPSVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ + + E ++A + L+E Q L++E LR +C+ K ++ K
Sbjct: 468 QVIGVPDPKYGEELMAWIILKEGEQ----------------LNAEELRTYCKGK-ISHHK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 511 IPR-YIEFTKEYPMTASGKIQKFKLRELSIEH 541
>gi|392953699|ref|ZP_10319253.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
gi|391859214|gb|EIT69743.1| AMP-binding domain protein [Hydrocarboniphaga effusa AP103]
Length = 582
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 156/335 (46%), Gaps = 50/335 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA ++ P F++ + L+A+E T L VP + +A + + S+
Sbjct: 278 LACITRGATMIYPAPTFDALATLKAIESERCTGLHGVPTMF--IAQVEHPEFKSFDLSSL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M++ + AYGMTETS P +F
Sbjct: 336 RNGVMAGAPCPEEVMRKLIAHMNLRDITIAYGMTETS-------------------PVSF 376
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLA 174
+ +P+S + VG+ PH+E KV SDG G + TRG VML YW+
Sbjct: 377 QS-SPSSPLDRRVSTVGRVQPHLECKVIDSDGKVVAHGERGELCTRGYSVMLGYWNDAEK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ ++ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 436 TAEAIDADGYMHTGDLATIDAEGYCAIVGRIKDLVIRGGENIYPREIEEFLFKHPLIEDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E V V+LR SE+ LR+ CRE+ + +K
Sbjct: 496 QVVGVPDEKYGEEVCVWVKLRAGATMSEAQ----------------LREFCRER-IAHYK 538
Query: 295 APRLFVLWRKPFPLTSTGKIR----RDEVRREVMS 325
PR +V + + FP+T TGKI+ RD + RE+ S
Sbjct: 539 VPR-YVRFVEEFPMTVTGKIQKFMIRDAMTREIAS 572
>gi|355666783|gb|AER93651.1| acyl-CoA synthetase family member 2 [Mustela putorius furo]
Length = 616
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 160/330 (48%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F+ K ALEA+ + + L P + D+ + + D
Sbjct: 321 MVSLMYGATLILSSPTFDGKKALEAISKERGSFLYGTPTMFVDILN----QPDFSSYDIS 376
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P EL++ + +L+ AYG TE +S +TF+ + T+E Q +
Sbjct: 377 SIRGGVIAGASAPPELIRAMIDKLNMKELVVAYGTTE-NSPVTFLNFPEDTVE---QKAE 432
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G V P++ Q V GK VEL G + RG VML YW +
Sbjct: 433 SVGRVMPHTEAQIVNVKTGK---LVELNT-------PGELWIRGYCVMLGYWGEPQKTEE 482
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + W TGDI +D G +VGR I GGEN+YP E+E HP + + VV
Sbjct: 483 IIGQDKWYRTGDIAMMDKQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVV 542
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL++ + +E E ++ C+ K ++ FK PR
Sbjct: 543 GVKDYRMGEEICACIRLKKGEKTTE----------------EEIKAFCKGK-ISHFKIPR 585
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+V++ FPLT +GKI++ ++R ++ HL
Sbjct: 586 -YVVFVTNFPLTVSGKIQKFKLREQMEQHL 614
>gi|443622955|ref|ZP_21107468.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
gi|443343506|gb|ELS57635.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
Length = 530
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 147/324 (45%), Gaps = 48/324 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ K+ LEAV++ TSL VP + +A L S++ +
Sbjct: 243 GACMVIPAPSFDPKATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS T T D LE
Sbjct: 301 GSPCPVEVMKRVVTEMNMAEVSICYGMTETSPVST-QTRRDDDLE--------------- 344
Query: 126 SVHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 345 --HRTG--TVGRVLPHIEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAV 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 401 DPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV R+ L+ E LR C + L +K P RL
Sbjct: 461 PHERYGEEVLACVIPRDPGD---------------PLTLEELRAFC-DGQLAHYKIPSRL 504
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+L FP+T +GK+R+ E+R +
Sbjct: 505 RIL--DAFPMTVSGKVRKVELREK 526
>gi|256393520|ref|YP_003115084.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256359746|gb|ACU73243.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 506
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 143/319 (44%), Gaps = 57/319 (17%)
Query: 12 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 71
+P+FE + L+A+E+H T VP + L+ + +++ +GG +P
Sbjct: 234 LVPRFEIEPVLDAMEKHRCTIFSGVPTMYF---ALLHADTAERDLSALRVGCSGGAPIPG 290
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
E+++ FP ++ YG++E++S+ TF N+ S Q +
Sbjct: 291 EVIRAFEEKFPGVVILEGYGLSESASTTTF-------------------NI---SAEQRK 328
Query: 132 GVCVGKPAPHVELKVCSDGS-------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV- 183
+GKP VE +V D HVG I+ RG ++M YW P + V
Sbjct: 329 VGSIGKPVWGVETRVVDDAGRTLPPRPEHVGEIVIRGHNMMKGYW----GNPEATAEAVR 384
Query: 184 --WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
W TGD+G D+ G ++V R+ + GG NVYP EVE VL HP I V+G A+
Sbjct: 385 DGWFHTGDLGYADEDGYFYIVDRKKDMVIRGGFNVYPREVEEVLYTHPAIAEAAVIGRAD 444
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
RL E VVA V L+ E + + CR++ + +K PR V
Sbjct: 445 ERLGEEVVAYVALKAGAHADEQD----------------VIAFCRDR-MAPYKYPRE-VR 486
Query: 302 WRKPFPLTSTGKIRRDEVR 320
+ P+ TGKI + E+R
Sbjct: 487 FLSALPVGPTGKILKKELR 505
>gi|28898738|ref|NP_798343.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260877268|ref|ZP_05889623.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
gi|260897784|ref|ZP_05906280.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|28806956|dbj|BAC60227.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308087611|gb|EFO37306.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|308090297|gb|EFO39992.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
Length = 513
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 158/330 (47%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 230 ASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|403279572|ref|XP_003931321.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 615
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + L P + D+ + + D
Sbjct: 320 MVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPDFSSYDIS 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S+ GG + EL++ N +L AYG TE +S +TFM L + T+E Q +
Sbjct: 376 SMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE---QKAE 431
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G + P++ + + GK A EL G + RG VML YW +
Sbjct: 432 SVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWGEPRKTEE 481
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP + + VV
Sbjct: 482 VVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVV 541
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL+ ES + E ++ C+ K ++ FK PR
Sbjct: 542 GVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK-ISHFKIPR 584
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
++++ +PLT +GK+++ ++R ++ HL
Sbjct: 585 -YIVFVTEYPLTISGKVQKFKLREQMERHL 613
>gi|448237203|ref|YP_007401261.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
gi|445206045|gb|AGE21510.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
Length = 539
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + +V+
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVALR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
E V A + L++ Q SE + + HCR KNL +K PR+ V
Sbjct: 472 PYRGETVKAIIVLKDGQQASEED----------------ILAHCR-KNLAAYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRAELPKTNVGKILRRALREE 534
>gi|403279574|ref|XP_003931322.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 602
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + L P + D+ + + D
Sbjct: 307 MVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPDFSSYDIS 362
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S+ GG + EL++ N +L AYG TE +S +TFM L + T+E Q +
Sbjct: 363 SMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE---QKAE 418
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G + P++ + + GK A EL G + RG VML YW +
Sbjct: 419 SVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWGEPRKTEE 468
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP + + VV
Sbjct: 469 VVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVV 528
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL+ ES + E ++ C+ K ++ FK PR
Sbjct: 529 GVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK-ISHFKIPR 571
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
++++ +PLT +GK+++ ++R ++ HL
Sbjct: 572 -YIVFVTEYPLTISGKVQKFKLREQMERHL 600
>gi|260903505|ref|ZP_05911900.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
gi|308106743|gb|EFO44283.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
Length = 513
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 158/330 (47%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 230 ASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|254385476|ref|ZP_05000803.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
gi|194344348|gb|EDX25314.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
Length = 546
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 148/325 (45%), Gaps = 46/325 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P FE + L AVE TSL VP + ++ L ++ + G P E+
Sbjct: 262 PSFEPAATLAAVEAESCTSLYGVPTMF--ISALADPGFDSYDLSGLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MKE + ++ YGMTETS T T D ++E +
Sbjct: 320 MKEVIDRMGMTEVSICYGMTETSPVST-QTRADDSVER-------------------RVS 359
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + G + TRG VML YW + W+ T
Sbjct: 360 TVGRVGPHLEVKVVDPATGRTVPRGEPGELCTRGYSVMLGYWGEPERTAEAVDAARWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D+ G + + GR + GGEN+YP E+E L HP ++ + V+G+ + + E
Sbjct: 420 GDLAVMDEDGYLSITGRIKDMVIRGGENLYPREIEEFLHTHPDVLDVQVIGVPDPKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VR+RE + L++E +R +C + L FK PR +V + FP
Sbjct: 480 LMAWVRMREGAE---------------PLTAETVRAYCAGR-LAHFKIPR-YVHVVEEFP 522
Query: 308 LTSTGKIRRDEVRREVMSHLKSLPS 332
+T TGKIR+ E+ RE + L P+
Sbjct: 523 MTVTGKIRKIEM-RETAARLLDPPA 546
>gi|414153677|ref|ZP_11409999.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454698|emb|CCO07903.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 554
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 50/335 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ GA V + F LE +E+ T++ VP + + L + K S++
Sbjct: 251 MTCVVSGATMVPLEVFHPVKVLETIEREKCTAVHGVPTMF--IMELEEMNKRNYDTGSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N ++ YG TE S ++T + DP
Sbjct: 309 TGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRIEDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQF 172
+ + VG+ P+VE K+ C G G I+ RG +VM Y+
Sbjct: 357 --------ELRVTTVGRVIPNVEAKIVDPETGEDCPPGVQ--GEIVARGYNVMKGYYKMP 406
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A E WL TGD+G +D+ G + GR I GGEN+YP E+E L HP I
Sbjct: 407 EATAQAIDREGWLHTGDLGIMDEKGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPAIK 466
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E V+A ++LRE + L+ E ++ +C++K +
Sbjct: 467 DVQVIGVPSLKYGEEVLAYIQLREGYS----------------LTKEEVQAYCKDK-IAK 509
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P +VL+ +P T++GKI++ ++R + +S L
Sbjct: 510 YKIPS-YVLFTDSYPTTASGKIQKFKLREQAISTL 543
>gi|407984492|ref|ZP_11165107.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407373902|gb|EKF22903.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 473
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 147/321 (45%), Gaps = 47/321 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F+ A+E +E+ +T L P + L +R K +++
Sbjct: 198 VASFLRGATMVPMAVFDIDRAVELIERERITMLPGPPTLYHSLLA-VRDKSKLA---TLR 253
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ + P L++ YG+TE + TL PG P+
Sbjct: 254 AAVTGAADIPVELIRRIRDELPFQSLMTGYGLTEAGNV---------TLSRPGDTPEQVA 304
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
G P VE+++ DG +L RG VM Y D +A
Sbjct: 305 T------------TAGLPCDGVEVRIADDGE-----VLVRGYGVMQGYLDDPVATAEAID 347
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G+ DD G + ++GR+ GG N YP E+E L+QHP + V+G+
Sbjct: 348 ADGWLHTGDLGNFDDTGRLRIIGRKKDMFIVGGFNAYPAEIEGFLMQHPAVAQAAVIGVP 407
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A V L K+ +S++ L RE+ + GFK PR +V
Sbjct: 408 DERLGQVGKAFVVL---------------KDGAPAVSADDLIAWSRER-MAGFKVPR-YV 450
Query: 301 LWRKPFPLTSTGKIRRDEVRR 321
+ PL +TGK+ +D++++
Sbjct: 451 EFLDALPLNATGKVMKDQLQK 471
>gi|403279578|ref|XP_003931324.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Saimiri boliviensis boliviensis]
Length = 645
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 158/330 (47%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM GA + P F K ALEA+ + L P + D+ + + D
Sbjct: 350 MVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----QPDFSSYDIS 405
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S+ GG + EL++ N +L AYG TE +S +TFM L + T+E Q +
Sbjct: 406 SMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDTVE---QKAE 461
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
+ G + P++ + + GK A EL G + RG VML YW +
Sbjct: 462 SVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGYWGEPRKTEE 511
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP + + VV
Sbjct: 512 VVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTHPKVQEVQVV 571
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL+ ES + E ++ C+ K ++ FK PR
Sbjct: 572 GVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK-ISHFKIPR 614
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
++++ +PLT +GK+++ ++R ++ HL
Sbjct: 615 -YIVFVTEYPLTISGKVQKFKLREQMERHL 643
>gi|389797499|ref|ZP_10200540.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
gi|388447131|gb|EIM03144.1| acyl-CoA synthetase [Rhodanobacter sp. 116-2]
Length = 557
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 153/334 (45%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + GAC V IP F++ + LE V + T L VP + +A L + +
Sbjct: 263 LACVTHGACMV-IPGEGFDALATLETVAEEKCTGLHGVPTMF--IAELEHPRFAEFDLST 319
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ A++ AYGMTETS ++F T+ D LE
Sbjct: 320 LRTGIMAGSPCPIEVMRRVVGEMHLAEITIAYGMTETSP-VSFQTVPDDPLER------- 371
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
+ VG+ P +E+K+ + V G + TRG VML YW+
Sbjct: 372 ------------RVDSVGRIHPQLEVKLVDERGLIVPRGTPGELCTRGYSVMLGYWEDES 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V W+ TGD+ ID G +VGR I GGENVYP EVE L HP ++
Sbjct: 420 RTREVIDAARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREVEEFLYAHPKVLD 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A VRLRE SE+ ++ +CR +L +
Sbjct: 480 VQVFGVPDTKFGEQVCAWVRLREGAGASEAE----------------IQDYCRH-HLAYY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P +V + FP+T TGK+++ +R ++ L
Sbjct: 523 KVPH-YVRFVDAFPMTVTGKVQKYRMREAMVDEL 555
>gi|433642703|ref|YP_007288462.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
gi|432159251|emb|CCK56555.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
Length = 547
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|289746287|ref|ZP_06505665.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
gi|289686815|gb|EFD54303.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
Length = 547
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|386399261|ref|ZP_10084039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385739887|gb|EIG60083.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 564
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 154/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + +GA V+ + F+ + L +EQ T+L VP + +A L + + S+
Sbjct: 264 LASVTLGATMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHSEFSNFNLTSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 322 RTGIMAGAPCPIEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLDR-------- 372
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 174
+ VG+ PHVE+KV DG G + TRG VML YW++
Sbjct: 373 -----------RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEPEK 421
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGDI IDD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 422 TADVLDANGWMHTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 481
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A+ R E + A +R+R L+ E +R C + + K
Sbjct: 482 QIFGVADTRYGEELCAWIRVRSGET----------------LTMEEVRAFC-DGQIAHNK 524
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + FP+T TGKI++ +R EV L
Sbjct: 525 IPR-YVEFVDEFPMTVTGKIQKFLMRDEVEQRL 556
>gi|217969185|ref|YP_002354419.1| AMP-binding domain-containing protein [Thauera sp. MZ1T]
gi|217506512|gb|ACK53523.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 576
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 47/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE + LE V Q T L VP + +A L + S++ + G P E+MK
Sbjct: 292 FEPLAVLETVAQEKCTGLYGVPTMF--IAALDHPRFAEFDLSSLRTGIMAGSPCPIEVMK 349
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS P +F + T + + + + V
Sbjct: 350 RVIGKMNMSEVTIAYGMTETS-------------------PVSFQSGTDDPIDR-RVSTV 389
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + V G + TRG VML YWD + K ++ G W+ TGD
Sbjct: 390 GRIQPHLEVKIVDNEGRIVPRGQSGELCTRGYSVMLGYWDDEARTKEAIDAGG-WMHTGD 448
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ IDD G +VGR + GGEN+YP E+E L HP ++ + VVGI + + E +
Sbjct: 449 LAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYAHPKVLDVQVVGIPDQKFGEELC 508
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A + RE + +E +R++C+ + + +K PR ++ + FP+T
Sbjct: 509 AWIIPREGERLTEDE----------------VREYCKGQ-IAHYKIPR-YIRFVDSFPMT 550
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R+ + L
Sbjct: 551 VTGKIQKFLIRQRMKEEL 568
>gi|374571689|ref|ZP_09644785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374420010|gb|EHQ99542.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 564
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 154/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + +GA V+ + F+ + L +EQ T+L VP + +A L + + S+
Sbjct: 264 LASVTLGATMVYPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHGEFSNFDLTSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 322 RTGIMAGAPCPIEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLDR-------- 372
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 174
+ VG+ PHVE+KV DG G + TRG VML YW++
Sbjct: 373 -----------RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEAEK 421
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGDI IDD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 422 TADVLDANGWMHTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 481
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A+ R E + A +R+R L+ E +R C + + K
Sbjct: 482 QIFGVADTRYGEELCAWIRVRSGET----------------LTMEEVRAFC-DGQIAHNK 524
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + FP+T TGKI++ +R EV L
Sbjct: 525 IPR-YVEFVDAFPMTVTGKIQKFLMRDEVEQRL 556
>gi|352080679|ref|ZP_08951618.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
gi|351683960|gb|EHA67036.1| AMP-dependent synthetase and ligase [Rhodanobacter sp. 2APBS1]
Length = 557
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 153/334 (45%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + GAC V IP F++ + LE V + T L VP + +A L + +
Sbjct: 263 LACVTHGACMV-IPGEGFDALATLETVAEEKCTGLHGVPTMF--IAELEHPRFVEFDLST 319
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ A++ AYGMTETS ++F T+ D LE
Sbjct: 320 LRTGIMAGSPCPIEVMRRVVGEMHLAEITIAYGMTETSP-VSFQTVPDDPLER------- 371
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
+ VG+ P +E+K+ + V G + TRG VML YW+
Sbjct: 372 ------------RVDSVGRIHPQLEVKLVDERGRIVPRGTPGELCTRGYSVMLGYWEDES 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V W+ TGD+ ID G +VGR I GGENVYP E+E L HP ++
Sbjct: 420 RTREVIDAARWMHTGDLAVIDADGYCRIVGRLKDMIIRGGENVYPREIEEFLYAHPKVLD 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A VRLRE SE+ ++ +CR +L +
Sbjct: 480 VQVFGVPDTKFGEQVCAWVRLREGAGASEAE----------------IQDYCRH-HLAYY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P +V + FP+T TGK+++ +R ++ L
Sbjct: 523 KVPH-YVRFVDAFPMTVTGKVQKYRMREAMVDEL 555
>gi|121638387|ref|YP_978611.1| AMP-binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990881|ref|YP_002645568.1| AMP-binding protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772241|ref|YP_005171974.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449064578|ref|YP_007431661.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494035|emb|CAL72513.1| Probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773994|dbj|BAH26800.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602425|emb|CCC65101.1| probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356594562|gb|AET19791.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449033086|gb|AGE68513.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGEAVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|429197284|ref|ZP_19189190.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
gi|428667012|gb|EKX66129.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
Length = 555
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 144/321 (44%), Gaps = 46/321 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AVEQ TSL VP + +A L S++ +
Sbjct: 270 GACMVIPAPSFDPAATLRAVEQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMA 327
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK +++ YGMTETS ++ T D LE
Sbjct: 328 GSPCPVEVMKRVVAEMHMSEVSICYGMTETSP-VSTQTRRDDDLE--------------- 371
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PHVE+KV + G + TRG VML YW++
Sbjct: 372 --HRTG--TVGRVLPHVEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEEPEKTAEAV 427
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 428 DAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGV 487
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V+ACV R++ L+ E LR C + L +K P
Sbjct: 488 PHERYGEEVLACVIPRDAAD---------------PLTLEELRAFC-DGRLAHYKIPSAL 531
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
+ FP+T +GK+R+ E+R
Sbjct: 532 RIL-DAFPMTVSGKVRKIELR 551
>gi|404213877|ref|YP_006668071.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403644676|gb|AFR47916.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 146/323 (45%), Gaps = 44/323 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++ LEAV ++ TSL VP + + S++ + G P +
Sbjct: 262 PAFDPRATLEAVAEYRCTSLYGVPTMFI-AELGLLDDGLDVDLSSLRTGIMAGSPCPEYV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + ++ YGMTETS T + DP + +
Sbjct: 321 MRQVVDRMHMREVSICYGMTETSPVSTQTRVDDPL--------------------ELRVT 360
Query: 134 CVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G G + TRG VM YW++ + W+ T
Sbjct: 361 TVGRVGPHLEIKIVDPGTGETSGRGETGELCTRGYSVMTGYWNEPEKTAEAIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 421 GDLADMDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VRLR+S +++ LR+ K + K PR +V + FP
Sbjct: 481 LMAWVRLRDSASG---------------FTADDLREFATGK-IARHKIPR-YVHVVEEFP 523
Query: 308 LTSTGKIRRDEVRREVMSHLKSL 330
+T TGK+R+ +R E +S L+ L
Sbjct: 524 MTVTGKVRKVAMRDEAVSILEQL 546
>gi|304311374|ref|YP_003810972.1| AMP-dependent synthetase/ligase [gamma proteobacterium HdN1]
gi|301797107|emb|CBL45323.1| AMP-dependent synthetase and ligase [gamma proteobacterium HdN1]
Length = 516
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 145/327 (44%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + G H +P+F+ L +E+ +T + VP ++ L + ++K SVK
Sbjct: 218 FAVTLAGGSHGIVPRFDVADVLSFMEREKITHTLLVPTMINLLVSSGKIKDF--DVSSVK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++L G +P ++ A P A YG TE S P + G G
Sbjct: 276 RMLYGASPMPEAVLVSAMEQMPDALFAQGYGQTEAS----------PIITALGPEFHVVG 325
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAK 175
S G+ A VE+ + VG I RG +VML YW A
Sbjct: 326 GAKLRSA--------GRAALGVEVAIMDKDDVELPRGEVGEICARGPNVMLGYWGMEQAS 377
Query: 176 P-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
++ +G WL TGD+G +D+ G V++V R I SGGEN++ EVE + HP +
Sbjct: 378 AETLRSG--WLHTGDLGYMDEDGFVFIVDRAKDMIISGGENIFSVEVEGAIYSHPSVREC 435
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + EMV A V L+E +E ELL HCR + G+K
Sbjct: 436 AVVGIPHDEWGEMVHAIVVLKEGHGLNEG---------ELL-------AHCRAL-IAGYK 478
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR +P P++ GKI ++E+R+
Sbjct: 479 LPRSIEFRSEPLPVSGAGKILKNELRK 505
>gi|15609642|ref|NP_217021.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
gi|15842033|ref|NP_337070.1| AMP-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31793685|ref|NP_856178.1| AMP-binding protein [Mycobacterium bovis AF2122/97]
gi|148662341|ref|YP_001283864.1| AMP-binding protein [Mycobacterium tuberculosis H37Ra]
gi|148823702|ref|YP_001288456.1| AMP-binding domain protein [Mycobacterium tuberculosis F11]
gi|167967650|ref|ZP_02549927.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
gi|253798415|ref|YP_003031416.1| AMP-binding protein [Mycobacterium tuberculosis KZN 1435]
gi|254232634|ref|ZP_04925961.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|254366808|ref|ZP_04982850.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551552|ref|ZP_05141999.1| AMP-binding domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289444036|ref|ZP_06433780.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289570665|ref|ZP_06450892.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289575210|ref|ZP_06455437.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289751114|ref|ZP_06510492.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289754614|ref|ZP_06513992.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289758637|ref|ZP_06518015.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|289762673|ref|ZP_06522051.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|294994388|ref|ZP_06800079.1| AMP-binding domain protein [Mycobacterium tuberculosis 210]
gi|297635113|ref|ZP_06952893.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297732104|ref|ZP_06961222.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN R506]
gi|298525977|ref|ZP_07013386.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776778|ref|ZP_07415115.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|306780544|ref|ZP_07418881.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|306785305|ref|ZP_07423627.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|306789659|ref|ZP_07427981.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|306793986|ref|ZP_07432288.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|306798381|ref|ZP_07436683.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|306804261|ref|ZP_07440929.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|306807698|ref|ZP_07444366.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|306968658|ref|ZP_07481319.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|306972889|ref|ZP_07485550.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|307080602|ref|ZP_07489772.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|307085188|ref|ZP_07494301.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|313659438|ref|ZP_07816318.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN V2475]
gi|339632531|ref|YP_004724173.1| fatty-acid-CoA ligase [Mycobacterium africanum GM041182]
gi|340627519|ref|YP_004745971.1| putative fatty-acid-CoA ligase FADD35 [Mycobacterium canettii CIPT
140010059]
gi|375295678|ref|YP_005099945.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 4207]
gi|385991815|ref|YP_005910113.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5180]
gi|385995434|ref|YP_005913732.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5079]
gi|385999285|ref|YP_005917584.1| AMP-binding protein [Mycobacterium tuberculosis CTRI-2]
gi|392387143|ref|YP_005308772.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|392431886|ref|YP_006472930.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 605]
gi|397674409|ref|YP_006515944.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|422813553|ref|ZP_16861925.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|424804843|ref|ZP_18230274.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|424948174|ref|ZP_18363870.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433627640|ref|YP_007261269.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|13882311|gb|AAK46884.1| substrate--CoA ligase [Mycobacterium tuberculosis CDC1551]
gi|31619278|emb|CAD97394.1| PROBABLE FATTY-ACID-COA LIGASE FADD35 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|124601693|gb|EAY60703.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|134152318|gb|EBA44363.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506493|gb|ABQ74302.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis H37Ra]
gi|148722229|gb|ABR06854.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis F11]
gi|253319918|gb|ACT24521.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 1435]
gi|289416955|gb|EFD14195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289539641|gb|EFD44219.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289544419|gb|EFD48067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289691701|gb|EFD59130.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289695201|gb|EFD62630.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289710179|gb|EFD74195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|289714201|gb|EFD78213.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|298495771|gb|EFI31065.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308214839|gb|EFO74238.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|308326610|gb|EFP15461.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|308330032|gb|EFP18883.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|308333876|gb|EFP22727.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|308337676|gb|EFP26527.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|308341357|gb|EFP30208.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|308345886|gb|EFP34737.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|308349149|gb|EFP38000.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|308353773|gb|EFP42624.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|308357716|gb|EFP46567.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|308361656|gb|EFP50507.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|308365268|gb|EFP54119.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|323718913|gb|EGB28067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|326904119|gb|EGE51052.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|328458183|gb|AEB03606.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 4207]
gi|339295388|gb|AEJ47499.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5079]
gi|339299008|gb|AEJ51118.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5180]
gi|339331887|emb|CCC27590.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium africanum
GM041182]
gi|340005709|emb|CCC44875.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140010059]
gi|344220332|gb|AEN00963.1| AMP-binding domain protein [Mycobacterium tuberculosis CTRI-2]
gi|358232689|dbj|GAA46181.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378545694|emb|CCE37972.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|379028808|dbj|BAL66541.1| acyl-CoA synthetase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053295|gb|AFM48853.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 605]
gi|395139314|gb|AFN50473.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|432155246|emb|CCK52492.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|440581981|emb|CCG12384.1| putative FATTY-ACID-CoA LIGASE FADD35 (FATTY-ACID-CoA SYNTHETASE)
(FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis
7199-99]
gi|444896038|emb|CCP45299.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|418049143|ref|ZP_12687230.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
gi|353190048|gb|EHB55558.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
Length = 1045
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AVEQ T+L VP + +A L + S++ + G P E+MK
Sbjct: 763 FDPGATLAAVEQERCTALYGVPTMF--IAMLGHSDLAHRDVSSLRTGIMAGAPCPVEIMK 820
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ TL D LE + V
Sbjct: 821 RCLEQLNMSEVSIAYGMTETSP-VSCQTLIDDDLER-------------------RTATV 860
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+KV + + G TRG VML YW+ E W+ TGD
Sbjct: 861 GRAHPHVEIKVVDPETGALVERGTTGEFCTRGYSVMLGYWNDEAKTAEAIDDEGWMHTGD 920
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ + D G +VGR + GGENVYP E+E L HP I + V+G+ + R E +
Sbjct: 921 LAVMRDDGYCQIVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDVQVIGVPDPRYGEEIC 980
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V++R Q L +K PR +V FP+T
Sbjct: 981 AWVKMRAG----------------AAPLDAAAVQEFAAGKLAHYKIPR-YVRVVDDFPMT 1023
Query: 310 STGKIRRDEVRREVMSHLKS 329
TGK+R+ E+R E++ L S
Sbjct: 1024 VTGKVRKVEMRAEMIRLLDS 1043
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 49/318 (15%)
Query: 11 VFIPK---FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 67
V IP F++++A+ + VTS PA + + R+ + W +++I G
Sbjct: 225 VVIPSSGGFDAEAAVRTIVAERVTSCWMTPAQWQIVCAMDRLAE-WD-LSCLRRIWWGAA 282
Query: 68 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 127
+ L++ T+ FP A++I+A+G TE S +T + D + G
Sbjct: 283 PASTTLLRNMTDVFPGAEIIAAFGQTE-CSPITCLLRGDDAMAKIGS------------- 328
Query: 128 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 182
VG P +VE ++ D + V G I+ +G VM YW++ G
Sbjct: 329 -------VGTPMLNVEARIVDDDMNDVVPGIVGEIVYQGPLVMAGYWNKPAETAEAFRGG 381
Query: 183 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 242
W +GD+ D+ G +++V R+ I SGGEN+Y EVE VL HP I + V+G+ +
Sbjct: 382 -WFHSGDLVRQDEDGYIYVVDRKKDMIISGGENIYSAEVENVLAAHPKIAEVAVIGVPDP 440
Query: 243 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 302
+ E +A + R+ D S ++ + HCRE+ L +K PR +
Sbjct: 441 KWGETPLAVIVPRDP-------ADPPSADE--------IESHCRER-LAAYKRPRRVAI- 483
Query: 303 RKPFPLTSTGKIRRDEVR 320
+ P ++GK+ + +R
Sbjct: 484 VEALPRNASGKVLKTVLR 501
>gi|148683984|gb|EDL15931.1| cDNA sequence BC018371, isoform CRA_a [Mus musculus]
Length = 627
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 157/345 (45%), Gaps = 55/345 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLA----------TLIRV 49
M +M GA + P F K ALEA+ + T L P + D+ T IR
Sbjct: 320 MVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTSIRG 379
Query: 50 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 109
+ + + + G P EL++ N +L+ YG TE +S +TFM + TL
Sbjct: 380 GEVLSKAARLGEGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTL 438
Query: 110 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAH 163
E Q G+V G+ PH E ++ + + + G + RG
Sbjct: 439 E------QKAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYC 479
Query: 164 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 223
VM YW + + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 480 VMQGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELED 539
Query: 224 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 283
L+HP + VVG+ + R+ E + AC+RL+ ++E ++
Sbjct: 540 FFLKHPQVQEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKA 583
Query: 284 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
C+ K ++ FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 584 FCKGK-ISHFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 626
>gi|52080516|ref|YP_079307.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645522|ref|ZP_07999754.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|404489403|ref|YP_006713509.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682474|ref|ZP_17657313.1| AMP-binding protein [Bacillus licheniformis WX-02]
gi|52003727|gb|AAU23669.1| AMP-dependent synthetase and ligase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52348397|gb|AAU41031.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392408|gb|EFV73203.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|383439248|gb|EID47023.1| AMP-binding protein [Bacillus licheniformis WX-02]
Length = 545
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + +F K L AVE T+L VP + +A L S++
Sbjct: 251 LACVTAGATMVPVQEFSPKEVLSAVETEKCTALHGVPTMF--IAELNDPDFASYDLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ ++ +++ AYG TE S +T
Sbjct: 309 TGIMAGSNCPIEVMKKVIDNMGMSEITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + + VG+ P+VE+K+ G++ G + TRG HVM Y+ A
Sbjct: 349 QTRVNDSLKRRVETVGRALPNVEVKITEPGTNREVERGVQGELCTRGYHVMKGYYKNPEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+V + +L TGD+ +D+ G + GR I GGEN+YP E+E L +HP I+ +
Sbjct: 409 TAAVIDEDGFLHTGDLAVMDEEGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPDILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VG+ + E V A ++L+ ++++ L+++C+ K + +K
Sbjct: 469 QIVGVPDETFGEEVSAWIKLKSGAS----------------MTADELKEYCKGK-IARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + + FP+T++GK+++ ++R + + H +
Sbjct: 512 IPR-YIAFVEEFPMTASGKVQKFKLREQALEHFQ 544
>gi|378716736|ref|YP_005281625.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751439|gb|AFA72259.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 561
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 53/331 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++AL AV H TSL VP + +A+LA L + +++ + G P
Sbjct: 269 PTFDPEAALRAVADHKCTSLYGVPTMFIAELALLDSGAEF--DLSTLRTGIMAGSPCPEH 326
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M++ + ++ YGMTETS T + DP G
Sbjct: 327 VMRQVVDRMHMGQVSICYGMTETSPVSTQTRMDDPLELRVG------------------- 367
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ-------FLAKPSVS 179
VG+ PH+E+KV S G TRG VM YW+Q + +P+
Sbjct: 368 -TVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSVMSGYWNQPDKSAEVLIPEPTDP 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+
Sbjct: 427 QGSPWMRTGDLAVMDPNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A +RLR D +S+ L+++ +R+ K + K PR F
Sbjct: 487 PDEKYGEELMAWIRLR----------DGASE-----LTADDVREFATGK-IARHKIPR-F 529
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
V K FP+T TGK+R+ ++R E + L +L
Sbjct: 530 VHVVKEFPMTVTGKVRKVQMREESVEILGTL 560
>gi|302530557|ref|ZP_07282899.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
gi|302439452|gb|EFL11268.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
Length = 546
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 153/328 (46%), Gaps = 46/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ K+ L AV TSL VP + +A L + S++ +
Sbjct: 247 GACMVIPAPAFDPKATLAAVAAERCTSLYGVPTMF--IAELNHPEFETFDLGSLRTGIMA 304
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK+ + ++ YGMTETS T T D ++E
Sbjct: 305 GSPCPVEVMKQVIDRMGMTEVSICYGMTETSPVST-QTRADDSVER-------------- 349
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E KV + G + TRG VML YW++
Sbjct: 350 -----RVSTVGRVGPHLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEEPEKTAEAI 404
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ +DD G + + GR + GGEN+YP E+E L HP ++ V+G+
Sbjct: 405 DAARWMHTGDLAIMDDEGYLNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGV 464
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A +R+RE + L+ E +R+ C+ K L +K PR +
Sbjct: 465 PDVKYGEELMAWIRMREGAE---------------PLTVESVREFCQGK-LAHYKIPR-Y 507
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ + FP+T TGK+R+ E+R++ ++ L
Sbjct: 508 IHVVEEFPMTVTGKVRKVEMRQQSVTLL 535
>gi|386360030|ref|YP_006058275.1| acyl-CoA synthetase [Thermus thermophilus JL-18]
gi|383509057|gb|AFH38489.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
thermophilus JL-18]
Length = 560
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 150/324 (46%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E K+ +EA+E+H VT VP + ++K + S++ L
Sbjct: 273 LFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFPSIEK--RNVKSIRICL 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K A+LI YG++E S +T +P L G +
Sbjct: 331 SGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNPVL----------GLIK 375
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 178
S+ G P P V+ KV + VG + +G +VM YW++ +
Sbjct: 376 KGSI--------GMPFPSVDAKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETEK 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 427 ALKDGWLLTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q + D + CR+ NL +K PR+
Sbjct: 487 VPDPYRGETVAAFIVLKPEYQNKVTEKD--------------IETFCRQ-NLAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 532 -IQFRESLPKSSVGKILRRELREE 554
>gi|303273146|ref|XP_003055934.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462018|gb|EEH59310.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 356
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 41/328 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
A+ VGA HV P FE+ + L +E CVT V + + + +L+ + + + D S+
Sbjct: 61 AVTAVGASHVIQPTFEAFATLRVIETECVT----VMNVASTMISLLVINPSLRDVDVSSL 116
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + GG L +K+A ++F + +YGMTE + M+L + L F
Sbjct: 117 RLVSCGGSPLAEVYIKQAISAF-GCEFFMSYGMTECCGKIA-MSLLSRSQRANCSLETQF 174
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVC-------SDGSSHVGRILTRGAHVMLRYWDQF 172
V + G+P EL+V + G VG I RG V YW +
Sbjct: 175 RTVCTS----------GRPFAPQELRVVDKNGENVTKGDGEVGEIYVRGLTVFDGYWHEL 224
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
K V W TGD+ +ID G + +V R+ + GGENVY EVEAVL HP +
Sbjct: 225 DVKKVVIDENGWFRTGDLATIDMFGYIQIVDRKTDMVLVGGENVYTAEVEAVLCAHPAVN 284
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V G+ N L ++V A V L+ + + L+ VL +H RE L+
Sbjct: 285 QAAVFGVDNELLGQIVHAVVVLKADF--------------DKLIDETVLLKHAREY-LSA 329
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
FK P + + + FP + TGK+ ++ +R
Sbjct: 330 FKVPAVLNIV-EAFPTSGTGKVLKNVLR 356
>gi|433631621|ref|YP_007265249.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
gi|432163214|emb|CCK60616.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
Length = 547
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 148/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL VP + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|242010698|ref|XP_002426097.1| firefly luciferase, putative [Pediculus humanus corporis]
gi|212510130|gb|EEB13359.1| firefly luciferase, putative [Pediculus humanus corporis]
Length = 582
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 156/340 (45%), Gaps = 52/340 (15%)
Query: 5 MVGACH----VFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
M+G H + IP F A+EA+ Q T L+ P + D+ +++ K+ D+
Sbjct: 284 MLGCVHEGLTLVIPTTAFSPTKAVEAIVQEKCTVLVGTPTMFIDVVKIVKQKEL--KIDT 341
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V+ ++GG + L + F ++ S YG+TET ++FM+
Sbjct: 342 VELAISGGAYTSTVLFSDMIEYFKVKRVSSVYGLTETGP-VSFMS--------------- 385
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
N + Q VG HVE KV D + G + RG ++M YW
Sbjct: 386 ----QVNDDREKQLTTVGCLMEHVEAKVVDDNGKTLPWNTPGELWVRGYNIMKGYWSLKE 441
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
T E WL TGD + + G +VGR+ I GGEN+YP ++E L HP I+
Sbjct: 442 KTKETITPERWLKTGDQFVLLENGYGKIVGRKKDLIIRGGENIYPADIEEFLSTHPDILE 501
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + RL E V AC+RL+ + L+ E +++ C+ K + F
Sbjct: 502 AQVVGLPDPRLGEQVCACIRLKPN----------------SFLTEEEVKEFCKGK-IADF 544
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
K P +V + FP+T + K+++ +++++ + H K L SN
Sbjct: 545 KIP-YYVWFVDKFPITPSAKVQKYKLQQDAIKHFK-LESN 582
>gi|297203377|ref|ZP_06920774.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
gi|197711466|gb|EDY55500.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
Length = 528
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 145/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV+Q TSL VP + +A L S++ +
Sbjct: 241 GACMVIPAPSFDPAATLRAVQQEGCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGIMA 298
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 299 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE--------------- 342
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 343 --HRTG--TVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAV 398
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 399 DQGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGV 458
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV R+ + E LR C E L +K P RL
Sbjct: 459 PHERYGEEVLACVIPRDPADPP---------------TLEELRGFC-EGRLAHYKVPSRL 502
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 503 KIL--DAFPMTVSGKVRKVELR 522
>gi|386758568|ref|YP_006231784.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
gi|384931850|gb|AFI28528.1| short-chain acyl-CoA synthetase [Bacillus sp. JS]
Length = 549
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + +P+F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVPEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGVQGELCTRGYHVMKGYYKDKEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ +
Sbjct: 409 TRKVINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +SS+ L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSSDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|111023051|ref|YP_706023.1| AMP-binding protein [Rhodococcus jostii RHA1]
gi|110822581|gb|ABG97865.1| CoA ligase [Rhodococcus jostii RHA1]
Length = 545
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L+AVE TSL VP + +A L S++ + G P E+
Sbjct: 262 PSFDPTATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEV 319
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ A++ YGMTETS ++ T D T++ +
Sbjct: 320 MKQVIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVS 359
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ + G + TRG VML YW+ W+ T
Sbjct: 360 TVGRVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHT 419
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E
Sbjct: 420 GDIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 479
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ VR+++ + L + +R+ C K L +K P+ +V FP
Sbjct: 480 LMVWVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFP 522
Query: 308 LTSTGKIRRDEVRREVMS 325
+T TGK+R+ E+R + +
Sbjct: 523 MTVTGKVRKVEMREQSLD 540
>gi|89097499|ref|ZP_01170388.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
gi|89087795|gb|EAR66907.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
Length = 586
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 155/331 (46%), Gaps = 52/331 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD-- 57
+A + VGA + + +F K L V+ T L VP + +A+L ++ G D
Sbjct: 283 LACVSVGATMLPVREFSPKEVLLTVQNEKCTGLHGVPTMFIAELN-----DPSFGGYDLS 337
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P E+MK A++ AYG TE+S +T DP
Sbjct: 338 SLRTGIMAGSNCPIEVMKAVIEKMGAAEITIAYGQTESSPVITQTRTDDPI--------- 388
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
+ + VGK PHVE+K+ + G+SH G + TRG HVM Y++
Sbjct: 389 -----------ELRVESVGKALPHVEVKIVTPGTSHEVPRGTQGELCTRGYHVMKGYYNN 437
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A E WL TGD+ +D+ G + GR + GGEN+YP E+E L HP +
Sbjct: 438 PDATKEAIDSEGWLHTGDLAVMDENGYCSITGRLKDMVIRGGENIYPREIEEFLYTHPKV 497
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + V G+ + E ++A + L+E + + K E LR CR K ++
Sbjct: 498 LDVQVTGVPDPVFGEELMAWIILKEG--------ETAGK--------EELRSFCRGK-IS 540
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR F + K +P+T++GKI++ ++R +
Sbjct: 541 RHKIPRYFE-FVKEYPMTASGKIQKFKLREK 570
>gi|359765441|ref|ZP_09269267.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317165|dbj|GAB22100.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 561
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 154/331 (46%), Gaps = 53/331 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++AL AV H TSL VP + +A+LA L + +++ + G P
Sbjct: 269 PTFDPEAALRAVADHKCTSLYGVPTMFIAELALLDSGAEF--DLSTLRTGIMAGSPCPEH 326
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M++ + ++ YGMTETS T + DP G
Sbjct: 327 VMRQVVDRMHMGQVSICYGMTETSPVSTQTRMDDPLELRVG------------------- 367
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ-------FLAKPSVS 179
VG+ PH+E+KV S G TRG VM YW+Q + +P+
Sbjct: 368 -TVGRVGPHLEVKVIDPVSGETLRRGETGEFCTRGYSVMSGYWNQPDKSAEVLIPEPTDP 426
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+
Sbjct: 427 QGSPWMRTGDLAVMDPNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGV 486
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A +RLR D +S+ L+++ +R+ K + K PR F
Sbjct: 487 PDEKYGEELMAWIRLR----------DGASE-----LTADDVREFATGK-IARHKIPR-F 529
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
V K FP+T TGK+R+ ++R E + L +L
Sbjct: 530 VHVVKEFPMTVTGKVRKVQMREESVEILGTL 560
>gi|56419565|ref|YP_146883.1| long-chain fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|56379407|dbj|BAD75315.1| long-chain fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
Length = 539
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 151/325 (46%), Gaps = 48/325 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ--YGISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRD-FEAKTGAVILEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + + +
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAAALR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
E V A + L++ Q SE E + HCR KNL +K PR+ V
Sbjct: 472 PYRGETVKAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRREVMSH 326
+R P T+ GKI R +R E SH
Sbjct: 514 FRAELPKTNVGKILRRALREEA-SH 537
>gi|345002934|ref|YP_004805788.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344318560|gb|AEN13248.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 536
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 149/322 (46%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + LEAV++ TSL VP + +A L S++ +
Sbjct: 250 GACIVIPAPAFEPAAVLEAVQRERCTSLYGVPTMF--IAELDLPDFAAYDLSSLRTGIMA 307
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS T T D LE
Sbjct: 308 GSPCPVEVMKRVVAEMHMEEVSICYGMTETSPVST-QTRRDDDLER-------------- 352
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSV 178
+ VG+ PH+E+KV +D + V G + TRG VML YWD+ V
Sbjct: 353 -----RTGTVGRALPHIEVKV-TDPVTGVTLPRGAAGELCTRGYSVMLGYWDEPERTAEV 406
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ + + G V ++GR I GGENVYP E+E L HP I + VVG
Sbjct: 407 VDAGRWMHTGDLAVMREDGYVRIIGRIKDMIIRGGENVYPREIEEFLYGHPKIADVQVVG 466
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+A+ + E ++ACV R D ++ + E + +CRE+ L +K PR
Sbjct: 467 VADEKYGEEILACVIPR----------DPAAPP-----TLEEVTAYCREQ-LAHYKIPRR 510
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+ FP+T +GK+R+ ++R
Sbjct: 511 LRIL-DTFPMTVSGKVRKIDLR 531
>gi|375007986|ref|YP_004981619.1| AMP-dependent synthetase and ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359286835|gb|AEV18519.1| AMP-dependent synthetase and ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 539
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRD-FEAKTGAVILEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + + +
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAAALR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
E V A + L++ Q SE E + HCR KNL +K PR+ V
Sbjct: 472 PYRGETVKAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRAELPKTNVGKILRRALREE 534
>gi|408383162|ref|ZP_11180700.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
gi|407814080|gb|EKF84717.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
Length = 553
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 46/328 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA GA V + F+ L AV++ T+L VP + +A S++
Sbjct: 250 MATFSHGATMVMVELFDPLLVLAAVQKERCTALYGVPTMF--IAEYSHPMFDMFDLSSLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E MK N ++ S YG+TE S T ++ DP
Sbjct: 308 TGIMAGSTPPIEAMKRVVNDMNMTQITSVYGLTEGSPGFTQTSVDDPL------------ 355
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLA 174
+ + VGKP P E+K+ G G I +G +VM Y+
Sbjct: 356 --------EKRVETVGKPLPECEVKIVDPETGETLGPHQTGEICCKGYNVMKGYYKMPDK 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL +GD+ S+D+ G +VGR I GGEN+YP E+E L PG++ +
Sbjct: 408 TREVIDEDGWLHSGDLASVDEEGYYSIVGRIKDMIIRGGENIYPREIEEFLYTMPGVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI++ + E+V AC+ L E + +E + +R + R K + FK
Sbjct: 468 QVVGISDEKYGEIVGACIILEEDAELTEED----------------VRDYARTK-IARFK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRRE 322
P+ V + FPLT++GKI++ +R +
Sbjct: 511 VPK-HVFFVDEFPLTASGKIQKFILREQ 537
>gi|55981399|ref|YP_144696.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55772812|dbj|BAD71253.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
Length = 548
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 155/327 (47%), Gaps = 47/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ +
Sbjct: 262 LLGGAKLVLLPRPEIKAIVEAIEKHQVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACI 319
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ E AKL+ YG+TE S LY G+ + G+
Sbjct: 320 SGSAPLPLEVA-ERFERLTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS-- 367
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 178
VG P P V+ KV + VG + +G +VM YW++ +
Sbjct: 368 -----------VGLPFPGVDAKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQK 415
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 416 TLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 475
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 476 VPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI 520
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 -IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|365866103|ref|ZP_09405729.1| AMP-binding domain protein [Streptomyces sp. W007]
gi|364004493|gb|EHM25607.1| AMP-binding domain protein [Streptomyces sp. W007]
Length = 535
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 141/321 (43%), Gaps = 46/321 (14%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV+Q TSL VP + +A L S++ +
Sbjct: 249 GACIVIPGPSFEPAAVLTAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+E+MK A++ YGMTETS T D G
Sbjct: 307 GSPCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLDRRTGT----------- 355
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E+KV + VG + TRG VML YWDQ
Sbjct: 356 ---------VGRALPHIEIKVVDPVTGVTLPRGSVGELRTRGYGVMLGYWDQPDRTAEAV 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V + GR I GGENVYP E+E L HP + + VVG+
Sbjct: 407 DAGRWMRTGDLAVMREDGYVQVAGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVVGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E ++ACV R+ + E + +CRE+ L +K PR
Sbjct: 467 PDERYGEEILACVIPRDPADPP---------------TLEEIAAYCRER-LAHYKIPRRL 510
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
+ + FP+T +GK+R+ E+R
Sbjct: 511 RIL-ETFPMTVSGKVRKIELR 530
>gi|333915332|ref|YP_004489064.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333745532|gb|AEF90709.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 564
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE+ S L AV+ T+L VP + +A L + +++ + G P E+MK
Sbjct: 279 FEAVSVLRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGSPCPIEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N ++ AYGMTETS + T +TP + + +
Sbjct: 337 RVVNEMHMGEVTIAYGMTETSPASC-----QSTTDTP---------------LEKRVSTI 376
Query: 136 GKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+ELKV S S VG + TRG VM YW+ E W+ +GD
Sbjct: 377 GKVLPHLELKVISPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDAEGWMHSGD 436
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +ID+ G V + GR + GGENVYP EVE L +HP I + V+G+ + + E +
Sbjct: 437 LATIDEDGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHPAIQDVQVIGVPDQKYGEELC 496
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A LR+ SE LR C+ + + +K PR ++ + + FP+T
Sbjct: 497 AWAILRDGATLSEDG----------------LRAFCKGQ-IAHYKIPR-YIRFVESFPMT 538
Query: 310 STGKIRRDEVRREVM 324
TGKI++ V RE+M
Sbjct: 539 VTGKIQK-FVMREMM 552
>gi|333913671|ref|YP_004487403.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
gi|333743871|gb|AEF89048.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
Length = 520
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 151/317 (47%), Gaps = 43/317 (13%)
Query: 10 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
V +P F+ + L V+QH V L VP ++ L R+ + S++ +L G +
Sbjct: 229 QVIVPAFDELAILAGVQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYGAAPI 286
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
+ L++ A + P A AYGMTE S ++ M P PG PQ +
Sbjct: 287 DASLLERAMQALPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ----------RE 331
Query: 130 PQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
G+P E+++ DG VG I RG VM YW++ A+ + + +
Sbjct: 332 RLLRAAGRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNK-PAETAAALKDG 389
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
W+ TGD+G +D G +++V R I SGGENVY EVE + Q P + V+G+ + R
Sbjct: 390 WMHTGDMGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLPQVAMCAVIGVPDER 449
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A + RE +E +EV+ HCRE+ + G+K PR V +R
Sbjct: 450 WGERVHAVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-SVEFR 491
Query: 304 KPFPLTSTGKIRRDEVR 320
PL++ GK+++ ++R
Sbjct: 492 AELPLSAAGKLQKFQLR 508
>gi|443702072|gb|ELU00234.1| hypothetical protein CAPTEDRAFT_220839 [Capitella teleta]
Length = 603
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 148/317 (46%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++ L+++EQ TSL+ P + D+ L DS+ L GG P ++K
Sbjct: 321 FKPEACLKSIEQERCTSLLGTPTMFIDILNLPNFDVY--TIDSLNTGLIGGSPCPINVVK 378
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYG TE +S LTF T D T+E Q +
Sbjct: 379 QIRTKLHMPEVTIAYGTTE-NSPLTFQTCQDDTVER-------------------QVSTI 418
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+P PHVE+KV V G + RG VM Y+ A V + W TGD+
Sbjct: 419 GRPLPHVEVKVVDREGRIVPVNTEGELCIRGYVVMHSYYQDEAATVEVLGSDRWYKTGDL 478
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ +VGR I GGEN+YP EVE VL ++ I + VVG+ + RL E V A
Sbjct: 479 ATMDEHSYAKIVGRIKDLIIRGGENIYPLEVEQVLYENSKIEDVQVVGVPDPRLQEQVCA 538
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++L+E Q++ E +++ C+ K L+ FK P ++ + FPLT
Sbjct: 539 WIKLKEG---------QTATADE-------IKEFCKGK-LSYFKIPH-YIQFVDAFPLTV 580
Query: 311 TGKIRRDEVRREVMSHL 327
+GKI++ ++R L
Sbjct: 581 SGKIQKYKIREMAAEQL 597
>gi|171315762|ref|ZP_02904994.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099061|gb|EDT43841.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 512
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 55/324 (16%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 67
A V P F+ K+AL + +H V + VP ++ L L S++ I+ G
Sbjct: 225 ATQVIHPGFDPKAALRDIAKHQVNEIFIVPTMLKVL--LDEPSFAEHEMSSLRNIIYGAA 282
Query: 68 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 127
+ + L++ A P ++ + AYGMTETS LP A +VT
Sbjct: 283 PIDASLLQSAMERIPSSQFLQAYGMTETSP-------------VSAMLPAAC-HVTGG-- 326
Query: 128 HQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
P+ G+PAP E+++ C G + G I RG VML YW+ KP +
Sbjct: 327 --PKLKAAGRPAPACEIRIVDLATDVDCLTGIA--GEIAVRGPGVMLGYWN----KPEET 378
Query: 180 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ W+ TGDIG +D G +++ R I SGGENVY EVE +L HP + V
Sbjct: 379 AKALRNGWMHTGDIGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLCAV 438
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VGI + E+V A V LR + E LR HCRE ++ +K P
Sbjct: 439 VGIPDETWGEIVHAIVVLRPGHT----------------VGIEDLRTHCRE-SIASYKCP 481
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVR 320
R + +R PL++ GK+ + ++R
Sbjct: 482 R-SIEFRSELPLSAAGKLLKYKLR 504
>gi|418291897|ref|ZP_12903853.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379063336|gb|EHY76079.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 560
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE +AL+A + T + VP + +A L ++ S++ + G P E+MK
Sbjct: 278 FEPLAALQAAAEEKATGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS T T D LE VT V
Sbjct: 336 RVIDDMHLAEMQIAYGMTETSPVST-QTSADDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + + +G + TRG VML YW+ A G W+ TGD+
Sbjct: 376 GRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G + +VGR I GGENVYP E+E L HP + + V+G+ +++ E +VA
Sbjct: 436 AVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+L Q + +E LR+ C+ + + FK PR + + FP+T
Sbjct: 496 WVKLHPGHQ----------------VEAEALREFCKGR-IAHFKTPR-HIRFVDDFPMTI 537
Query: 311 TGKIRRDEVR 320
+GK+++ +R
Sbjct: 538 SGKVQKFRMR 547
>gi|312199209|ref|YP_004019270.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230545|gb|ADP83400.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 506
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 47/322 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A L+ GA + F+ + E VE+ +T L P + L I + GRD S
Sbjct: 230 IASLIKGATMFPLAVFDVATVAEIVEREKITMLPGAPTVYQSLLEAIGSGQI-AGRDLSS 288
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P EL++ P +++ YG+TE ++ T PG +
Sbjct: 289 LRCAVTGSADIPVELIRRMKQELPFQHIMTGYGLTEAGTA---------TASRPGD---S 336
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
F ++ VG P +E+ + D +L RG VM Y++ A
Sbjct: 337 FEDIA---------TTVGAPCDGIEVAIAGDS-----EVLIRGYSVMQGYFENPAATTDT 382
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGD+GS+DD G V ++GR+ GG N YP E+E LL+HP I V+G
Sbjct: 383 IDADGWLHTGDLGSMDDRGYVKIIGRKKDMFIVGGFNAYPAEIEGYLLEHPAIAQAAVIG 442
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +AR+ E+ A + R + + SK + + GFKAPR
Sbjct: 443 VPDARMGEVCKAFLVKRSGAEVTADEIIAWSKER-----------------MAGFKAPR- 484
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
FV + PL +TGK+ +D++R
Sbjct: 485 FVEFLDALPLNATGKVVKDQLR 506
>gi|194014794|ref|ZP_03053411.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
gi|194013820|gb|EDW23385.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
Length = 545
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L G + I F + L+ VE+ T L VP + +A L +++
Sbjct: 251 LACLAKGGTIIPIESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHKYNLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 309 TGIMAGSLCPSHVMKAVIEQMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+ PH+E+K+ + G+ + G + TRG HVM Y+ A
Sbjct: 362 -------------TVGRALPHIEVKITAPGTPYEVPRGEQGELCTRGYHVMKGYYKNEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D+ G V + GR I GGENVYP+E+E VL HP I+
Sbjct: 409 TNEVIDEDGWLHTGDLAEMDEDGYVIITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDA 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + E A +RL++ ++ E L +C+ + + +K
Sbjct: 469 QVVGIPDETYGEEAAAFIRLKQGHA----------------VTIETLTSYCQSQ-MARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ F + + +P+T++GKI++ ++++ + +K
Sbjct: 512 IPKYFFITDE-YPMTASGKIQKFRLKKQALDLIK 544
>gi|334339638|ref|YP_004544618.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
gi|334090992|gb|AEG59332.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
Length = 554
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 56/338 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ GA V + F LE V+Q T+L VP + ++ +++ KG V
Sbjct: 251 MTCVVSGATMVPLEVFNPVRVLEIVDQERCTALHGVPTMF-----IMELEELAKGNYDVS 305
Query: 61 KILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+ G G P E+MK + ++ YG TE S ++T DP
Sbjct: 306 SLRTGIMAGSPCPIEVMKAVVDRMGMKEITITYGQTEASPAITMTRTDDPI--------- 356
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYW 169
+ + VGK P+VE K+ C G G I +RG +VM Y+
Sbjct: 357 -----------ELRVATVGKVIPNVEAKIVDPETGEDCPPGIQ--GEICSRGYNVMKGYY 403
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
A + WL TGD+G +D+ G + GR I GGENVYP E+E L HP
Sbjct: 404 KMPEATAQAIDQDGWLHTGDLGIMDEKGYFKITGRLKDMIIRGGENVYPREIEEFLYTHP 463
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
I + VVG+ + + E V+A V+LRE + L+ E ++ +CR+K
Sbjct: 464 LIKDVQVVGVPSMKYGEEVLAYVQLREG----------------VTLTKEEIQDYCRDK- 506
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ +K P +VL+ +P+T++GKI++ ++R + ++ L
Sbjct: 507 IAKYKIPS-YVLFIDHYPITASGKIQKYKLREQAITAL 543
>gi|146283536|ref|YP_001173689.1| AMP-binding protein [Pseudomonas stutzeri A1501]
gi|145571741|gb|ABP80847.1| probable AMP-binding enzyme [Pseudomonas stutzeri A1501]
Length = 560
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 45/295 (15%)
Query: 31 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 90
T + VP + +A L ++ S++ + G P E+MK + A++ AY
Sbjct: 293 TGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAY 350
Query: 91 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 150
GMTETS T T D LE VT VG+ PH+E K+ +
Sbjct: 351 GMTETSPVST-QTSADDDLER---------RVT----------SVGRTQPHLESKIVDEH 390
Query: 151 SS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 205
+ +G + TRG VML YW+ A G W+ TGD+ +DD G + +VGR
Sbjct: 391 GAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTGDLAVMDDEGYIKIVGRN 450
Query: 206 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
I GGENVYP E+E L HP + + V+G+ +++ E +VA V+L Q
Sbjct: 451 KDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQ------ 504
Query: 266 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ +E LR+ C+ + + FK PR + + FP+T +GK+++ +R
Sbjct: 505 ----------VEAEALREFCKGR-IAHFKTPR-HIRFVDDFPMTISGKVQKFRMR 547
>gi|169631453|ref|YP_001705102.1| AMP-binding domain-containing protein [Mycobacterium abscessus ATCC
19977]
gi|420912039|ref|ZP_15375351.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|420918500|ref|ZP_15381803.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|420923662|ref|ZP_15386958.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|420929323|ref|ZP_15392602.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|420969000|ref|ZP_15432203.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
gi|420979661|ref|ZP_15442838.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|420985045|ref|ZP_15448212.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|421010205|ref|ZP_15473314.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|421015206|ref|ZP_15478281.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|421020303|ref|ZP_15483359.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|421026289|ref|ZP_15489332.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|421031530|ref|ZP_15494560.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|421036336|ref|ZP_15499353.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|169243420|emb|CAM64448.1| Probable fatty-acid-CoA ligase [Mycobacterium abscessus]
gi|392111391|gb|EIU37161.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|392114033|gb|EIU39802.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|392126311|gb|EIU52062.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|392128315|gb|EIU54065.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|392163939|gb|EIU89628.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|392170041|gb|EIU95719.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|392195811|gb|EIV21430.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|392198278|gb|EIV23892.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|392206026|gb|EIV31609.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|392209812|gb|EIV35384.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|392219412|gb|EIV44937.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|392220188|gb|EIV45712.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|392244656|gb|EIV70134.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
Length = 546
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|329940648|ref|ZP_08289929.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
gi|329300709|gb|EGG44606.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
Length = 548
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 148/324 (45%), Gaps = 52/324 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV+ TSL VP + +A L S++ +
Sbjct: 256 GACIVIPAPSFEPAATLRAVQSERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 313
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 314 GSPCPVEVMKRVVTEMHMAEVSICYGMTETSP-VSLQTRRDDDLE--------------- 357
Query: 126 SVHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPS 177
H+ VG+ PH+E+KV G+S G + TRG VML YW++
Sbjct: 358 --HRTG--TVGRVLPHIEVKVVDPVTGVTQPRGTS--GELCTRGYSVMLGYWEEPAKTAE 411
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VV
Sbjct: 412 VVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVV 471
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP- 296
G+ + R E V+ACV RE+ D + + +R C E L +K P
Sbjct: 472 GVPHERYGEEVLACVIPREAG-------DPPTLQE--------VRAFC-EGRLAHYKVPT 515
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVR 320
RL VL FP+T +GK+R+ E+R
Sbjct: 516 RLSVL--DSFPMTVSGKVRKVELR 537
>gi|154250610|ref|YP_001411434.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
gi|154154560|gb|ABS61777.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
Length = 520
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 151/334 (45%), Gaps = 58/334 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK----TWKGRD 57
A + G HVF+P FE S L+ +EQH + + VP ++ L + + +WKG
Sbjct: 220 ATTIYGGSHVFMPSFEPASFLKLIEQHRASYALLVPTMIRMLLDCPAMAQHDLSSWKG-- 277
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQL 115
+ G +P L++EA P YG TE + T + LE P G+L
Sbjct: 278 ----LFYGASPMPEALLREALAKLPGVAFTQGYGQTELAPIATLLGPEFHVLEGPNAGKL 333
Query: 116 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWD 170
A G+P VEL+V DG VG + RG + ML YW+
Sbjct: 334 RSA-----------------GRPGLCVELRVVGPDGKELPRGEVGEVAVRGPNTMLGYWN 376
Query: 171 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
KP + + W+ TGD G +D+ G +++V R I SGGENV+ EVE ++Q
Sbjct: 377 ----KPEQTAATLVDGWVMTGDGGYMDEEGFLYIVDRLKDMIVSGGENVFSAEVENAVMQ 432
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
H + V+G+ + + E V A V +S ++ LS E L HC+
Sbjct: 433 HDAVAECAVIGVPDPKWGERVHAVV------------VPKSGRH----LSEEELFAHCKA 476
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+ G+K PR + +P P ++ GKI + ++RR
Sbjct: 477 L-IAGYKCPRSADIRHEPLPKSAAGKILKTDLRR 509
>gi|88704664|ref|ZP_01102377.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
gi|88700985|gb|EAQ98091.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
Length = 518
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 146/323 (45%), Gaps = 47/323 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILNG 65
G CH F+P F+ ++ +E VT + VP + L L+ GR +++ + G
Sbjct: 224 GLCHTFLPSFDLSKVMDLLEAEKVTHTLMVPTM---LGMLVNHPDFDPGRLSALRSVAYG 280
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNVT 123
+P LM P + YG TE + +T + + TLE P G++ A
Sbjct: 281 ASPMPEGLMHTLLERLPNIGWMQGYGQTEMAPIITLLPAENHTLEGPNAGKMRSA----- 335
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSV 178
G+ AP VE+++C DG + VG I+ R M YW++ +
Sbjct: 336 ------------GRAAPGVEVRICDEDGKDLPNGEVGEIVARAPGSMSGYWNRPEQTEAT 383
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+G W+ TGD DD G +++V R I +GGENV+ EVE + HP + + V+G
Sbjct: 384 LSGG-WVKTGDGAYRDDDGFIFIVDRLKDMIVTGGENVFSAEVENAVSTHPAVAAVSVIG 442
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + R E V A V L+E QS +EL+ +H + +K PR
Sbjct: 443 IPDERWGEAVHAIVILQEG---------QSVTVEELI-------EHTH--TIANYKRPRS 484
Query: 299 FVLWRKPFPLTSTGKIRRDEVRR 321
+PFPL+ GKI + E+R+
Sbjct: 485 ISFRDEPFPLSGAGKILKTELRK 507
>gi|392983887|ref|YP_006482474.1| AMP-binding protein [Pseudomonas aeruginosa DK2]
gi|419753428|ref|ZP_14279832.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|384400550|gb|EIE46909.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392319392|gb|AFM64772.1| AMP-binding domain protein [Pseudomonas aeruginosa DK2]
Length = 564
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDSQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|419708416|ref|ZP_14235886.1| AMP-binding domain protein [Mycobacterium abscessus M93]
gi|382944448|gb|EIC68756.1| AMP-binding domain protein [Mycobacterium abscessus M93]
Length = 546
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|56962365|ref|YP_174090.1| AMP-binding protein [Bacillus clausii KSM-K16]
gi|56908602|dbj|BAD63129.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 545
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 159/329 (48%), Gaps = 48/329 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL-IRVKKTWKGRDSV 59
+A + V A V + +F + L V+ T+L VP + +A L +R T+ S+
Sbjct: 250 LACVSVAATMVPVEEFHPEKVLHTVQAEKCTALHGVPTMF--IAELNLRTFDTYD-LSSL 306
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK+ ++ AYG TE+S +T T D +LE
Sbjct: 307 RTGIMAGSNCPVEVMKDVIEKMGITEITIAYGQTESSPVIT-QTRVDDSLER-------- 357
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFL 173
+ VG+ P+VE+K+ D V G +LTRG HVM Y+ Q
Sbjct: 358 -----------RTDTVGRALPNVEVKIVDPDTQEEVAAGVQGELLTRGYHVMKGYYKQPE 406
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V TG+ WL TGD+ +D+ G + GR I GGEN+YP E+E L HP I+
Sbjct: 407 ETAKVLTGDGWLHTGDLAIMDEDGYCKITGRLKDMIIRGGENIYPREIEEFLYTHPSILD 466
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + E+V A +RL+ D S L++ ++ +C+ + F
Sbjct: 467 VQVVGLPDPKYGEIVSAWIRLK---------ADHS-------LTAAEVQDYCK-GQIAHF 509
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K P++ V + FP+T++GK+++ ++R +
Sbjct: 510 KIPQV-VEFVDHFPMTASGKVQKFKLREQ 537
>gi|419716125|ref|ZP_14243523.1| AMP-binding domain protein [Mycobacterium abscessus M94]
gi|382941331|gb|EIC65650.1| AMP-binding domain protein [Mycobacterium abscessus M94]
Length = 546
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|377575599|ref|ZP_09804589.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
gi|377535715|dbj|GAB49754.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
Length = 500
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 52/331 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV--KKTWKGRDSVKK 61
VGA IP+FE AL+ + + VT VP + L + T G D+++
Sbjct: 211 FAVGATLTLIPRFEPAKALDMLRRDRVTVFFGVPTMYGALLAAAGALPEGTDLGIDALRV 270
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG +P ELM+ F ++ YG++E+S + +F
Sbjct: 271 CISGGASMPVELMRRFEARF-GCMILEGYGLSESSPAASFNQ------------------ 311
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVC---------SDGSSHVGRILTRGAHVMLRYWDQF 172
P++ +P VG P P VE+K+ S + +G I RG ++M YW+
Sbjct: 312 --PHAERKPG--SVGFPVPGVEMKLVPVAVEGDEGSAAAEGLGEIAIRGENIMRGYWNNP 367
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A +V + W TGD+G +D+ G ++V R I GG NVYP EVE VL +HP +
Sbjct: 368 EATAAVLDEDGWFRTGDMGRVDEDGYYYIVDRAKDLIIRGGYNVYPREVEEVLYEHPAVA 427
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ VVG+ + + E V A V R + E LR+ +E+ +
Sbjct: 428 EVAVVGMTHEQYGEEVGAYVVARAGHS----------------IDVEELREFAKER-VAA 470
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
+K PR+ + + P +TGKI + E+ R+V
Sbjct: 471 YKYPRVIRILEE-LPKGATGKILKRELPRDV 500
>gi|357387650|ref|YP_004902489.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
gi|311894125|dbj|BAJ26533.1| putative long-chain fatty-acid--CoA ligase [Kitasatospora setae
KM-6054]
Length = 562
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 158/337 (46%), Gaps = 52/337 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD- 57
+A + GAC V P F++ + L AV TSL VP + +A+LA + G D
Sbjct: 266 LAAVSHGACTVIPAPAFDAATTLAAVAAERCTSLYGVPTMFIAELA-----DPGFDGYDL 320
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
S++ + G P+E+MK ++ YGMTETS T T D ++E
Sbjct: 321 SSLRTGIMAGAPCPTEVMKGVMERMGMTEVSICYGMTETSPVST-QTRADDSVER----- 374
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
+ VG+ PH+E+KV + H G + TRG VML YW
Sbjct: 375 --------------RVSTVGRVGPHLEVKVVDPETGHTVPRGEPGELCTRGYSVMLGYWA 420
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + + W+ TGD+ +D G + + GR + GGENVYP EVE L HP
Sbjct: 421 EPVKTAEAVDPDGWMHTGDLAVMDADGYLSITGRIKDMVIRGGENVYPREVEEFLYAHPD 480
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
++ + V+G+ +A+ E ++A VR+RE + L++E +R C + L
Sbjct: 481 VLDVQVIGVPDAKYGEELMAWVRMREGAR---------------PLTAEAVRAFCTGR-L 524
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR +V FP+T TGK+R+ E+R + L
Sbjct: 525 AHFKIPR-YVHVVDEFPMTVTGKVRKVEMRERAAAIL 560
>gi|358638274|dbj|BAL25571.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 584
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 158/334 (47%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GA ++ FE + LE + + T+ VP + +A L K ++
Sbjct: 284 LGCLTHGATMIYPAESFEPLATLETLAEERCTASYGVPTMF--IAMLDHPKFNEFDLSAL 341
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS P +F
Sbjct: 342 RTGIMAGSPCPIEVMKRVIDKMHMREVTIAYGMTETS-------------------PVSF 382
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ + V G + TRG VML YW D+
Sbjct: 383 QSGTDDPIDR-RVSTVGRVQPHLEVKIVDNEGRIVPRGTPGELCTRGYSVMLGYWGDEAK 441
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ +V G W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I+
Sbjct: 442 TREAVDAGR-WMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILD 500
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + E + A V +RE SE +R+ C+ + + +
Sbjct: 501 VQVVGVPDQKYGEELCAWVIVREGQTLSEDE----------------VREFCKGQ-IAHY 543
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ ++R ++ L
Sbjct: 544 KVPR-YIRFVDTFPMTVTGKIQKFQIREQMKREL 576
>gi|389875794|ref|YP_006373529.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
gi|388530749|gb|AFK55945.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
Length = 557
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 154/329 (46%), Gaps = 47/329 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + FE ++ LEAV+ T+L VP + L K ++
Sbjct: 260 LACITHGATMVFPSEAFEPRATLEAVQAERCTALHGVPTMFITELALPDFKSF--DLSTL 317
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E M+E ++ YGMTETS ++F T D LET +
Sbjct: 318 RTGIMAGAPCPIETMREVIAKMNMREVTICYGMTETSP-VSFQTRADADLETRTE----- 371
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQF 172
VG P VE+++ DG V G + TRG VM YW D+
Sbjct: 372 --------------TVGTIHPFVEVRIV-DGDDRVVPVGTVGELHTRGYSVMAGYWNDEA 416
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ +++ G W+ TGD+G ID+ G +VGR I GGEN+YP E+E L+ HPGI+
Sbjct: 417 RTRDAIAPGG-WMRTGDLGVIDERGRCRIVGRSKDMILRGGENIYPVEIENFLITHPGIL 475
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V GIA+A+ E V A W N D SS + +L C E +
Sbjct: 476 DVAVFGIADAKYGEQVCA-------WIRRADNPDGSSLTEAAVLG------FC-EGRIAH 521
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
FK PR + + + P+T TGKI++ +R+
Sbjct: 522 FKIPRR-IRFVEDMPMTVTGKIQKFLMRQ 549
>gi|227205702|dbj|BAH56668.1| putative acyl-CoA synthetase [Rhodococcus sp. HI-31]
Length = 500
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 155/338 (45%), Gaps = 59/338 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L GAC +P+FE+ + + +E+H VT VP + +L+ + S++
Sbjct: 212 ASLAAGACVSLVPRFEAVAVVRLIERHRVTVFEGVPTMYV---SLLHADLSEADTSSLRI 268
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP E++ +F A ++ YG++ETS + TF
Sbjct: 269 CISGGAALPIEVLNGFQGAF-GAPILEGYGLSETSPTATF-------------------- 307
Query: 122 VTPNSVHQPQGVCVGKPAPHVELK-VCSDGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
N + + + +G P VELK V DG+ VG I+ RG +VM YW +P
Sbjct: 308 ---NRIGKSKPGSIGLPIDGVELKLVARDGTETLPGEVGEIVIRGHNVMKGYWK----RP 360
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + W TGD+ + D+ G ++V R+ I GG NVYP E+E VL +HP +
Sbjct: 361 DATAAAIVDGWFHTGDMATRDEDGFYFIVDRKKDIIIRGGYNVYPREIEEVLYEHPAVRE 420
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ + E V A + LR + + E LRQ+ + + + +
Sbjct: 421 VAVIGLPHPTYGEEVAAAITLRPGAE----------------ATPEELRQYVKSR-VAAY 463
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
K PR L K P +TGKI + E+ + +HL P
Sbjct: 464 KYPRHVWLADK-LPKGATGKILKREI--GIPAHLLEQP 498
>gi|348170337|ref|ZP_08877231.1| AMP-binding domain protein [Saccharopolyspora spinosa NRRL 18395]
Length = 541
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 141/312 (45%), Gaps = 45/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++L +V TSL VP + +A L S++ + G P E+MK
Sbjct: 257 FDPAASLASVAAERCTSLYGVPTMF--IAELDHPDFDSFDLSSLRTGIMAGSPCPVEVMK 314
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + A++ YGMTETS ++ T D +LE + V
Sbjct: 315 QVIDRMGMAEVSICYGMTETSP-VSMQTRADDSLER-------------------RVSTV 354
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + G TRG VML YW Q W+ TGD
Sbjct: 355 GRVGPHLEVKIIDPATGLTVPRGTPGEFCTRGYSVMLGYWQQADTTAEAIDAARWMHTGD 414
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+ + R E ++
Sbjct: 415 LAVMDADGYVSITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDQRYGEELM 474
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A +R+RE + L+ E LR+ C K L +K PR +V FP+T
Sbjct: 475 AWIRMREGAK---------------ALTVEALREFCTGK-LAHYKIPR-YVHVVDEFPMT 517
Query: 310 STGKIRRDEVRR 321
TGKIR+ E+R+
Sbjct: 518 VTGKIRKVEMRQ 529
>gi|289768167|ref|ZP_06527545.1| acyl-CoA synthetase [Streptomyces lividans TK24]
gi|289698366|gb|EFD65795.1| acyl-CoA synthetase [Streptomyces lividans TK24]
Length = 541
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 147/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + LEAV++ TSL VP + +A L S++ +
Sbjct: 253 GACIVIPAPSFEPAATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 311 GSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE--------------- 354
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 355 --HRTG--TVGRVLPHIEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+
Sbjct: 411 DPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV +R++ L+ E LR +C L +K P RL
Sbjct: 471 PHERYGEEVLACVVVRDAAD---------------PLTLEELRAYC-AGQLAHYKVPSRL 514
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 515 QLL--DSFPMTVSGKVRKVELR 534
>gi|421167427|ref|ZP_15625616.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
gi|404534460|gb|EKA44194.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 700888]
Length = 564
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREVSIEEIRLL 557
>gi|313107462|ref|ZP_07793649.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|386066494|ref|YP_005981798.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310880151|gb|EFQ38745.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|348035053|dbj|BAK90413.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 564
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREVSIEEIRLL 557
>gi|420865927|ref|ZP_15329316.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|420870721|ref|ZP_15334103.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|420875166|ref|ZP_15338542.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|420989866|ref|ZP_15453022.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|421041581|ref|ZP_15504589.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|421045520|ref|ZP_15508520.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
gi|392064643|gb|EIT90492.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|392066641|gb|EIT92489.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|392070191|gb|EIT96038.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|392184145|gb|EIV09796.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|392222509|gb|EIV48032.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|392234973|gb|EIV60471.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
Length = 546
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPNSGETVQRRQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|260363738|ref|ZP_05776514.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
gi|308114927|gb|EFO52467.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
Length = 513
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 230 ASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L F
Sbjct: 439 VAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K P+ FV R+ P+++TGKI + E++ E+
Sbjct: 482 KYPK-FVEIREQLPMSATGKILKRELKSEL 510
>gi|416858764|ref|ZP_11913524.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|334839139|gb|EGM17834.1| AMP-binding domain protein [Pseudomonas aeruginosa 138244]
gi|453044975|gb|EME92696.1| AMP-binding domain protein [Pseudomonas aeruginosa PA21_ST175]
Length = 564
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREVSIEEIRLL 557
>gi|424941819|ref|ZP_18357582.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|346058265|dbj|GAA18148.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
Length = 564
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAVDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|291436418|ref|ZP_06575808.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339313|gb|EFE66269.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 541
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 149/325 (45%), Gaps = 54/325 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKI 62
GAC V P F+ ++ LEAV++ TSL VP + +L R T S++
Sbjct: 254 GACIVIPAPSFDPEATLEAVQRERCTSLYGVPTMFIAELNLPGFARYDLT-----SLRTG 308
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK ++ YGMTETS ++ T D +E
Sbjct: 309 IMAGSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRRDDDME------------ 355
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 356 -----HRTG--TVGRVLPHIEVKVVDPATGTTRPRGSTGELCTRGYSVMLGYWNEPERTA 408
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP + + V
Sbjct: 409 EVVDAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLHTHPEVADVQV 468
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + R E V+ACV R+ + E LR CR++ L +K P
Sbjct: 469 VGVPHERYGEEVLACVVPRDPADPP---------------TLEDLRAFCRDR-LAHYKVP 512
Query: 297 -RLFVLWRKPFPLTSTGKIRRDEVR 320
RL +L FP+T +GK+R+ E+R
Sbjct: 513 SRLQIL--DAFPMTVSGKVRKVELR 535
>gi|261419227|ref|YP_003252909.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|319766043|ref|YP_004131544.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261375684|gb|ACX78427.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|317110909|gb|ADU93401.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 539
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ--YGISSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ + + +
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAAALR 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
E V A + L++ Q SE E + HCR KNL +K PR+ V
Sbjct: 472 PYRGETVKAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRAELPKTNVGKILRRALREE 534
>gi|407695854|ref|YP_006820642.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253192|gb|AFT70299.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 523
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 153/325 (47%), Gaps = 41/325 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ ++VG V +P F ++ L A+E+ +T +I VP+++ L +V++ S+
Sbjct: 223 ITQIVVGGTAVMMPSFRVEAVLAAIEREKITDVILVPSMIQMLVDHPKVRE--HDLSSLT 280
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ G + +++ A FP A+ YGMTE S +T ++
Sbjct: 281 RVAYGASPISLPVLERALAVFPDAQFTHTYGMTEASPMITL---------------NSWR 325
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
N +++ + GK +E+++ + V G ++ RG +VML YW+ A
Sbjct: 326 NHRGEALNNGRIRSAGKATWGMEVRIVDEDDREVPRGTVGEVVARGDNVMLGYWNNPDAT 385
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
G WL TGD G +D+ G +++V R I SGGENVY EVE VL +HP +
Sbjct: 386 AETLRGG-WLHTGDGGYMDEDGYIYIVDRIKDMIVSGGENVYCAEVENVLARHPAVASCA 444
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + E V A V + + +S+E L CR+ +L G+K
Sbjct: 445 VIGIPHDTWGESVHAVVVTQSGVE----------------VSAEELTDFCRD-DLAGYKC 487
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V +R PL+ GK+ + E+R
Sbjct: 488 PR-SVEFRDSLPLSGAGKVLKQELR 511
>gi|339495326|ref|YP_004715619.1| AMP-binding domain-containing protein [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338802698|gb|AEJ06530.1| AMP-binding domain protein [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 560
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 45/295 (15%)
Query: 31 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 90
T + VP + +A L ++ S++ + G P E+MK + A++ AY
Sbjct: 293 TGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAY 350
Query: 91 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 150
GMTETS T T D LE VT VG+ PH+E K+ +
Sbjct: 351 GMTETSPVST-QTSADDDLER---------RVT----------SVGRTQPHLESKIVDEH 390
Query: 151 SS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 205
+ +G + TRG VML YW+ A G W+ TGD+ +DD G + +VGR
Sbjct: 391 GAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTGDLAVMDDEGYIKIVGRN 450
Query: 206 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
I GGENVYP E+E L HP + + V+G+ +++ E +VA V+L Q
Sbjct: 451 KDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQ------ 504
Query: 266 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ +E LR+ C+ + + FK PR + + FP+T +GK+++ +R
Sbjct: 505 ----------VEAEALREFCKGR-IAHFKTPR-HIKFVDDFPMTISGKVQKFRMR 547
>gi|159045943|ref|YP_001534737.1| acyl-CoA synthetase [Dinoroseobacter shibae DFL 12]
gi|157913703|gb|ABV95136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Dinoroseobacter shibae DFL 12]
Length = 579
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 150/319 (47%), Gaps = 45/319 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L+ V +H T+L VP + + R + S++ + G P E+
Sbjct: 293 PGFDPITTLDTVSKHRCTALYGVPTMFVGMLEHPRFAE--YDLSSLRTGIMAGAPCPIEI 350
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + +++ AYGMTETS P +F + T + V Q +
Sbjct: 351 MRQVQSRMHMSEVTIAYGMTETS-------------------PVSFQSATDDPV-QKRVS 390
Query: 134 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ PHVE+K+ + S V G +LTRG VM YWD+ + W+ TG
Sbjct: 391 SVGRIQPHVEVKIVDEDSVVVPVGAQGELLTRGYSVMQGYWDEPDKTAEAIDADGWMHTG 450
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ ++D G + GR I GGENVYP E+E L HP I + V GI + + E+V
Sbjct: 451 DLATLDVDGFCKITGRVKDMIVRGGENVYPREIEEFLYTHPAISQVQVFGIPDQKFGEIV 510
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA W ++ D + +E+L CR+ ++ FK P + V ++ P+
Sbjct: 511 VA-------WLVAKPGADPT--------EAEIL-DFCRD-SIAHFKVPAM-VRFKNSLPM 552
Query: 309 TSTGKIRRDEVRREVMSHL 327
T TGK ++ +R +++ L
Sbjct: 553 TVTGKPQKFIMRAQMVEEL 571
>gi|355642303|ref|ZP_09052704.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
gi|354830374|gb|EHF14420.1| hypothetical protein HMPREF1030_01790 [Pseudomonas sp. 2_1_26]
Length = 564
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREVSIEEIRLL 557
>gi|15597753|ref|NP_251247.1| AMP-binding protein [Pseudomonas aeruginosa PAO1]
gi|218891464|ref|YP_002440331.1| AMP-binding protein [Pseudomonas aeruginosa LESB58]
gi|418585097|ref|ZP_13149152.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418590678|ref|ZP_13154586.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420139736|ref|ZP_14647555.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|421160319|ref|ZP_15619389.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
gi|421517066|ref|ZP_15963740.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|9948616|gb|AAG05945.1|AE004683_9 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|218771690|emb|CAW27464.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|375044826|gb|EHS37418.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375050635|gb|EHS43115.1| AMP-binding domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|403247484|gb|EJY61121.1| AMP-binding domain protein [Pseudomonas aeruginosa CIG1]
gi|404346548|gb|EJZ72897.1| AMP-binding domain protein [Pseudomonas aeruginosa PAO579]
gi|404544803|gb|EKA53935.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 25324]
Length = 564
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|77993368|ref|NP_001030123.1| acyl-CoA synthetase family member 2, mitochondrial precursor
[Rattus norvegicus]
gi|123781622|sp|Q499N5.1|ACSF2_RAT RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|71121982|gb|AAH99826.1| Acyl-CoA synthetase family member 2 [Rattus norvegicus]
Length = 615
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 50/323 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPS 71
P F K ALEA+ + T L P + D+ + + D +++ + G P
Sbjct: 334 PSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFTTIRGGVIAGSLAPP 389
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
EL++ + +L+ YG TE +S +TFM + TLE Q G+V
Sbjct: 390 ELIRAIISKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------QKAGSV--------- 433
Query: 132 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
G+ PH E ++ + + + G + RG VM YW + + W
Sbjct: 434 ----GRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWY 489
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGDI S+D+ G +VGR I GGEN+YP E+E +HP + VVG+ + R+
Sbjct: 490 RTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMG 549
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E + AC+RL+ +E E ++ C+ K ++ FK PR ++++ +
Sbjct: 550 EEICACIRLKSGETTTE----------------EEIKAFCKGK-ISHFKIPR-YIVFVEG 591
Query: 306 FPLTSTGKIRRDEVRREVMSHLK 328
+PLT +GKI++ ++R ++ HLK
Sbjct: 592 YPLTVSGKIQKFKLREQMEQHLK 614
>gi|157692555|ref|YP_001487017.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
gi|157681313|gb|ABV62457.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
Length = 545
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 151/334 (45%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L G + I F + L+ VE+ T L VP + +A L +++
Sbjct: 251 LACLTKGGTIIPIESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHKYNLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 309 TGIMAGSLCPSHVMKAVIEQMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLA 174
VG+ PH+E+K+ + G+ G + TRG HVM Y+ A
Sbjct: 362 -------------TVGRALPHIEVKITAPGTPDEVLRGEQGELCTRGYHVMKGYYKNEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D+ G V + GR I GGENVYP+E+E VL HP I+
Sbjct: 409 TNEVIDEDGWLHTGDLAEMDEDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDA 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + E A +RL++ ++ E L +C+ + + +K
Sbjct: 469 QVVGIPDETYGEEAAAFIRLKQGHT----------------VTIETLTSYCQSQ-MARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ F + + +P+T++GKI++ ++++ + +K
Sbjct: 512 IPKYFFITDE-YPMTASGKIQKFRLKKQALDLIK 544
>gi|384440070|ref|YP_005654794.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
gi|359291203|gb|AEV16720.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
Length = 560
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 146/329 (44%), Gaps = 57/329 (17%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
L G V +P+ E K +EA+E+H VT VP + ++ GR+ S++
Sbjct: 273 LFSGYKIVLLPRPEIKPIVEAIEKHGVTHFPGVPTLYVAFNNFPGIE----GRNVKSIRI 328
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
L+G LP E+ K A+LI YG++E S P N
Sbjct: 329 CLSGAAPLPVEVAKR-FEEITGARLIEGYGLSEAS-------------------PVTHSN 368
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 176
V + +G P P VE KV + VG ++ +G +VM YW+ +P
Sbjct: 369 PVEGVVKK---GSIGMPLPSVEAKVVDEEGKELPPGEVGELILKGPNVMKGYWN----RP 421
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
S + WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QHP +
Sbjct: 422 EESQKTLKDGWLFTGDLAKMDPDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQE 481
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + E V A + L+ ++ S D + CR+ NL +
Sbjct: 482 AAVVGVPDPYRGETVAAFIVLKNEYKGKVSEKD--------------IETFCRQ-NLAAY 526
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR+ + +R P +S GKI R E+R E
Sbjct: 527 KVPRI-LQFRDTLPKSSVGKILRRELREE 554
>gi|254240989|ref|ZP_04934311.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451984300|ref|ZP_21932557.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
gi|126194367|gb|EAZ58430.1| hypothetical protein PA2G_01670 [Pseudomonas aeruginosa 2192]
gi|451758229|emb|CCQ85080.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas aeruginosa 18A]
Length = 564
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|410090765|ref|ZP_11287350.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
gi|409761922|gb|EKN46964.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
Length = 557
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 146/326 (44%), Gaps = 46/326 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA ++ P FE + LEAV T L VP + + L + S+
Sbjct: 260 LACLTHGATMIYPAPSFEPLATLEAVASERATFLYGVPTMF--IKELDLPDRQALDLSSL 317
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
K + G P E+M++ + + + AYGMTETS ++ T D LE
Sbjct: 318 KGGIMAGSICPIEVMRQVIDQMHMSGVQIAYGMTETSP-VSLQTSNDDPLEL-------- 368
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA 174
+ VG+ PH+E KV ++ VG + TRG VML YW A
Sbjct: 369 -----------RVTSVGRTQPHLEHKVIDTDANTVERGQVGELCTRGYSVMLGYWQDAEA 417
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E W+ TGD+ +D G V +VGR I GGEN+YP E+E +LLQH I
Sbjct: 418 TARDIDAEGWMHTGDLVQMDADGYVTIVGRSKDMIIRGGENIYPREIEELLLQHSDIAEA 477
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI R E +VA VRL C++ +LR R + + FK
Sbjct: 478 YVVGIPCDRYGEDLVAWVRLHPG-----HVCEEP-----------LLRDFFRSR-VAHFK 520
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR F + FP+T TGK+++ +R
Sbjct: 521 VPRHF-FFVDEFPMTVTGKVQKFRLR 545
>gi|91228657|ref|ZP_01262572.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91187778|gb|EAS74095.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 513
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 159/330 (48%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ GA V +P+FE K LE VE+ VT VP + L + V+ + S++
Sbjct: 230 ASVLGGATLVLVPRFEPKHVLELVEKRRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRV 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E+ + +F ++ YG++ETS F L + PG
Sbjct: 286 AVSGGAPLPTEIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG-------- 334
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 176
VG+P VE++V +G++ G I+ RG +VM Y D +P
Sbjct: 335 ------------SVGQPVQGVEVRVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RP 378
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP +
Sbjct: 379 EVTESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSM 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI N E + A V L K KE + ++ L++ +E+ L F
Sbjct: 439 VAVIGIPNEEYGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASF 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR +V R+ P+++TGKI + E++ E+
Sbjct: 482 KYPR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|297530802|ref|YP_003672077.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|297254054|gb|ADI27500.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
Length = 539
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 47/321 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA ++ +P+FE K LE + T VP + + V++ G +S+K +G
Sbjct: 256 GAENILLPRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQ--YGINSIKTCNSGS 313
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P ELM++ + A ++ YG++E S +T +P P +
Sbjct: 314 APMPLELMRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFA 352
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+P V +G P ++ + G+ VG ++ RG VM YW+ +V
Sbjct: 353 ARKPGTVGIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWNMPEETAAVLR- 411
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ SID+ G V +V R+ I +GG N+YP E+E VL +HP + VG+ +
Sbjct: 412 DGWLYTGDLASIDEEGYVTIVDRKKDLIIAGGYNIYPREIEEVLYEHPAVKEAAAVGVPD 471
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
E V A + L++ Q SE E + HCR KNL +K PR+ V
Sbjct: 472 PYRGETVKAIIVLKDGMQASE----------------EEILAHCR-KNLAAYKVPRI-VE 513
Query: 302 WRKPFPLTSTGKIRRDEVRRE 322
+R P T+ GKI R +R E
Sbjct: 514 FRAELPKTNVGKILRRALREE 534
>gi|290956371|ref|YP_003487553.1| long-chain-fatty-acid-CoA ligase [Streptomyces scabiei 87.22]
gi|260645897|emb|CBG68988.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces scabiei
87.22]
Length = 530
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 143/322 (44%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + LEAV Q TSL VP + +A L S++ +
Sbjct: 243 GACVVIPAPSFDPGATLEAVRQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS T T D LE
Sbjct: 301 GSPCPVEVMKRVVTEMHMREVAICYGMTETSPVST-QTRRDDDLEH-------------- 345
Query: 126 SVHQPQGVCVGKPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 346 -----RTATVGRVLPHIEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAV 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 401 DAGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-L 298
+ R E V+ACV E + L+ E LR +C E L +K P L
Sbjct: 461 PHERYGEEVLACVVPHEGAE---------------PLTLEELRAYC-EGRLAHYKIPSAL 504
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
VL FP+T +GK+R+ E+R
Sbjct: 505 RVL--DSFPMTVSGKVRKIELR 524
>gi|296139574|ref|YP_003646817.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296027708|gb|ADG78478.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 506
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 155/328 (47%), Gaps = 55/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
A + G +P+FE+ + L+ +E+ VT L VP + L + GRD ++
Sbjct: 222 AAVRYGGSVALVPRFEAAAVLDVMERRRVTVLSGVPTMYVAL-----LGAGPGGRDLSAL 276
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++GG +P +++ +F ++ YG++ET+S+ TF
Sbjct: 277 RAAVSGGASIPGGVLRGFEEAFGGIAVLEGYGLSETASTATF------------------ 318
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQF 172
N+ S Q + + +GKP V++++ G +HVG +L RG +VM Y+ +
Sbjct: 319 -NI---SADQRKVLSIGKPIWGVQMRIVDPDGVELPPGDAHVGEVLVRGHNVMKGYYKRP 374
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A + + WL TGD+G D+ G ++V R + GG NVYP E+E VL HP ++
Sbjct: 375 EATAE-ALRDGWLHTGDLGYRDEDGYFFIVDRLKDLVIRGGYNVYPREIEEVLYTHPDVV 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VVG + RL E V A V LR S D +E L RE+ L
Sbjct: 434 EAAVVGRPDERLGEEVEAFVVLRPG-----SATD-----------TEALTAFARER-LAA 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR FV+ + P +TGKI + E+R
Sbjct: 477 YKYPRSFVILPE-LPKGATGKILKRELR 503
>gi|254235546|ref|ZP_04928869.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
gi|126167477|gb|EAZ52988.1| hypothetical protein PACG_01473 [Pseudomonas aeruginosa C3719]
Length = 564
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|421180309|ref|ZP_15637876.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
gi|404545989|gb|EKA55058.1| AMP-binding domain protein [Pseudomonas aeruginosa E2]
Length = 564
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|107102005|ref|ZP_01365923.1| hypothetical protein PaerPA_01003052 [Pseudomonas aeruginosa PACS2]
gi|116050501|ref|YP_790680.1| AMP-binding protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|421174299|ref|ZP_15632030.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
gi|115585722|gb|ABJ11737.1| putative acyl-CoA synthetases (AMP-forming) [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404534503|gb|EKA44236.1| AMP-binding domain protein [Pseudomonas aeruginosa CI27]
Length = 564
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|134099340|ref|YP_001105001.1| feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133911963|emb|CAM02076.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 497
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 150/329 (45%), Gaps = 51/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+ L+ G V + FE ALE + +H VT L VP + +A + +W+ D S
Sbjct: 213 LPTLLKGGTVVLMESFEPAVALELIARHRVTLLFGVPTMYDAIAA----QPSWESADLSS 268
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP----TLETPGQ 114
V+ +L GG +P ++ + + YGMTETS + + DP T
Sbjct: 269 VRTLLCGGSPVPDATIRRYLDR--GLVFVQGYGMTETSPGVLIL---DPDAVRTKAGTAG 323
Query: 115 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
+P F +V SV P G V + G I+ RG +VML YW+Q A
Sbjct: 324 VPSFFTDV---SVVDPSGNPVA--------------AGERGEIVVRGPNVMLGYWNQPDA 366
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+G W+ +GD+ ++D+ G + +V R I SGGENVYP EVE+ L +HP +
Sbjct: 367 TDEALSGG-WMHSGDVATVDEDGYITIVDRIKDLIISGGENVYPAEVESALYEHPAVELC 425
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E+ A V LR + + D+ LR H R ++L +K
Sbjct: 426 AVVGVPDPKWGEVPRAAVVLRPG---AGATADE-------------LRDHLR-RHLAAYK 468
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREV 323
P+ W P T GKIR+ VR +
Sbjct: 469 VPKQVDFWDD-LPRTGAGKIRKQAVRERL 496
>gi|384103854|ref|ZP_10004818.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383838685|gb|EID78055.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 490
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 150/331 (45%), Gaps = 49/331 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA +V + KF + LEA +++ TS VP + +A L+ T +++++
Sbjct: 204 LVKGAPNVIVSKFSPGAFLEAGQKYRATSTFMVPTM---IAMLLEDPATAAADLALERLC 260
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG + + +++ + YG E ++T + P T +L A
Sbjct: 261 YGGAPIATSVLQRGIDIL-GPVFAQLYGQAEAPLAITCLQ---PWEHTSDRLTSA----- 311
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
GKP VE++V S G VG +LTRG H M RYW + +A
Sbjct: 312 ------------GKPYTFVEVQVRSTDGTVLGPGEVGEVLTRGPHTMSRYWRRPVATAET 359
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG DD G + L+ RR+ I SGG NVYP EVE LL HP ++ VVG
Sbjct: 360 IEPDGWLHTGDIGRWDDDGYLHLLDRRHDVIISGGFNVYPREVEDALLTHPAVVEAAVVG 419
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V R + + E + + C ++ L GFK PR
Sbjct: 420 LPDDKWGERVAAAVVTRSAAEPDE------------------ILEFCADR-LAGFKRPRS 460
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
+W P + GK R EVR +++ ++
Sbjct: 461 LEIWPN-IPTSPVGKSLRREVRDRMVAAARA 490
>gi|359424226|ref|ZP_09215348.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358240500|dbj|GAB04930.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 515
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 156/332 (46%), Gaps = 55/332 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A +VGA V +P F+ + + ++ H +T + VP ++ A L K S++
Sbjct: 221 VAAALVGATQVVLPAFDPVAVMRLIQDHRITRAVLVPTMLH--AVLNHPKAGDFDLSSLE 278
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-F 119
++ GG + + A P A + YGMTE ++ +T + LP+
Sbjct: 279 TVVYGGSPIAQATLDHAREFLPAAGFLQVYGMTEMAAVVTTL------------LPEDHV 326
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFL 173
G++T ++ G+ APH ++V GS VG ++ +GA++M YW
Sbjct: 327 GDLTKSA---------GRAAPHALIRVLDPGSGRELPIGSVGEVVVQGANMMTEYWR--- 374
Query: 174 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+P + G + WL TGD G +D+ G +++V R I SGGENVY EVE + +HP
Sbjct: 375 -RPEETAGVIRGGWLHTGDAGYLDERGYLFIVDRVKDMIVSGGENVYSVEVENAVAKHPA 433
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + V+G+ + + E V A V LR E+ L L+ CR+ +
Sbjct: 434 VSQVAVIGVPDDKWGERVHAIVVLR----------------PEMSLELGELQNSCRQ-TI 476
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
G+K PR + P++ GKI + ++R+E
Sbjct: 477 AGYKCPRSMTVV-DSLPISPAGKILKRDLRKE 507
>gi|71994694|ref|NP_001023938.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
gi|351063225|emb|CCD71311.1| Protein ACS-1, isoform b [Caenorhabditis elegans]
Length = 597
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ + DS++
Sbjct: 291 ALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMIN--HPEYANYNYDSIRS 348
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 349 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 404
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 405 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 453
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 454 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPD 513
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 514 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 557
Query: 302 WRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 558 FKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 597
>gi|291007274|ref|ZP_06565247.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 477
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 150/329 (45%), Gaps = 51/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+ L+ G V + FE ALE + +H VT L VP + +A + +W+ D S
Sbjct: 193 LPTLLKGGTVVLMESFEPAVALELIARHRVTLLFGVPTMYDAIAA----QPSWESADLSS 248
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP----TLETPGQ 114
V+ +L GG +P ++ + + YGMTETS + + DP T
Sbjct: 249 VRTLLCGGSPVPDATIRRYLDR--GLVFVQGYGMTETSPGVLIL---DPDAVRTKAGTAG 303
Query: 115 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
+P F +V SV P G V + G I+ RG +VML YW+Q A
Sbjct: 304 VPSFFTDV---SVVDPSGNPVA--------------AGERGEIVVRGPNVMLGYWNQPDA 346
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+G W+ +GD+ ++D+ G + +V R I SGGENVYP EVE+ L +HP +
Sbjct: 347 TDEALSGG-WMHSGDVATVDEDGYITIVDRIKDLIISGGENVYPAEVESALYEHPAVELC 405
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E+ A V LR + + D+ LR H R ++L +K
Sbjct: 406 AVVGVPDPKWGEVPRAAVVLRPG---AGATADE-------------LRDHLR-RHLAAYK 448
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREV 323
P+ W P T GKIR+ VR +
Sbjct: 449 VPKQVDFWDD-LPRTGAGKIRKQAVRERL 476
>gi|430804861|ref|ZP_19431976.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429502988|gb|ELA01291.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 515
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 59/326 (18%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNG 65
A V +P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+ G
Sbjct: 225 ATQVILPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNIIYG 280
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
+ L++ A P ++ + AYGMTETS + +
Sbjct: 281 AAPIDGALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------ADCH 322
Query: 126 SVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
V P+ G+PAP E+++ C G+ VG + RG VML YW+ KP
Sbjct: 323 VVASPRLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----KPE 376
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W+ TGD G +D G +++ R I SGGENVY EVE +L HP +
Sbjct: 377 ETARALRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLC 436
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI + + E V A + +R + LS + + HCRE+ + +K
Sbjct: 437 AVIGIPDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IASYK 479
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V +R PL++ GK+ + ++R
Sbjct: 480 CPR-SVEFRADMPLSAAGKLLKYKLR 504
>gi|55981432|ref|YP_144729.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55772845|dbj|BAD71286.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus HB8]
Length = 560
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E K+ +EA+E+H VT VP + +++ + SV+ +
Sbjct: 273 LFSGYKIVLLPRPEIKAIVEAIEKHQVTHFPGVPTLYVAFNNFPGIER--RDLKSVRACI 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E + E AKL+ YG+TE S LY G+ + G+
Sbjct: 331 SGSAPLPLE-VAERFERLTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS-- 378
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 178
VG P P V+ KV + VG + +G +VM YW++ +
Sbjct: 379 -----------VGLPFPGVDAKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQK 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 427 TLKDGWLFTGDLAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 487 VPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 532 -IQFRESLPKSSVGKILRRELREE 554
>gi|416872613|ref|ZP_11916817.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|416872754|ref|ZP_11916934.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845741|gb|EGM24301.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
gi|334845851|gb|EGM24410.1| AMP-binding domain protein [Pseudomonas aeruginosa 152504]
Length = 564
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRTFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|333369906|ref|ZP_08461993.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
gi|332969073|gb|EGK08112.1| AMP-binding domain protein [Psychrobacter sp. 1501(2011)]
Length = 599
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 160/336 (47%), Gaps = 52/336 (15%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A+L G C ++ P FE S L+AVE+ T+L VP + +A L +
Sbjct: 305 LAILTHGGCIIY-PNDGFEPLSVLKAVEEEKCTALHGVPTMF--IAELEHPDFDQYDLST 361
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + +++ AYGMTETS
Sbjct: 362 LRTGIMAGSSCPIEVMRRVIDEMHMSEVTIAYGMTETSP--------------------V 401
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQ 171
N+ Q VG P++E+K+ + V G +LTRG VM YW +
Sbjct: 402 SCQTNKNTPLDKQVSTVGLVQPNLEVKIVDTETGEVVPIGETGELLTRGYSVMKGYWGSR 461
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
F + S+ G W+ TGD+ ++D+ G + +VGR + GGEN+YP E+E L +HP I
Sbjct: 462 FKTRESIKDG--WMHTGDLATMDEEGYIKVVGRSKDMVIRGGENIYPVEIENYLYRHPKI 519
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ +VG+ + + E++ A W ++ N + L+ E ++Q C+E N+
Sbjct: 520 SDVQIVGVPDQKYGEVLAA-------WIIAKQNVE---------LTEEEVKQFCKE-NIA 562
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P+ F ++ +P+T TGKI++ ++ ++ L
Sbjct: 563 HYKIPKYFRFVQE-YPMTITGKIQKYKITEMMIEEL 597
>gi|71994690|ref|NP_001023937.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
gi|351063224|emb|CCD71310.1| Protein ACS-1, isoform a [Caenorhabditis elegans]
Length = 623
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ + DS++
Sbjct: 317 ALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMIN--HPEYANYNYDSIRS 374
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 375 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 430
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 431 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 479
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 480 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPD 539
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 540 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 583
Query: 302 WRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 584 FKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 623
>gi|418422601|ref|ZP_12995772.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993674|gb|EHM14896.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 544
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D LE +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLER-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEVKIVDPDSGETVQRGQPGELCTRGYSVMLGYWNDEEHTQEVLDADGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G ++GR + GGENVYP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMREDGYCTIIGRLKDMVIRGGENVYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+ K +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRM---------------KADRVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|404320688|ref|ZP_10968621.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi CTS-325]
Length = 562
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 162/335 (48%), Gaps = 48/335 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + G+C V IP F+ L+ VE+ T L VP + +A L + + S
Sbjct: 262 LACVTHGSCMV-IPNDSFDPLLTLQTVEEEQCTGLHGVPTMF--IAMLDHPEFSRFNLTS 318
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + ++++ AYGMTETS P +
Sbjct: 319 LRTGIMAGSPCPIEVMRRVVSEMHQSEITIAYGMTETS-------------------PVS 359
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFL 173
F + T + + + + VG+ PH+E+K+ +DG G +LTRG VM YW+
Sbjct: 360 FQSSTTDPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAE 418
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I
Sbjct: 419 SSAGAIDDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFTHPAISD 478
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ + GI + + E++ A V+L +K+ LS E L ++CR++ + +
Sbjct: 479 VQIFGIPDRKFGEIICAWVKL----------------HKDGELSEEELIEYCRQR-IAHY 521
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P + + FP+T TGKI++ +R+ ++ L+
Sbjct: 522 KVPA-HIRFVDQFPMTVTGKIQKFVMRQVMIEELE 555
>gi|262369650|ref|ZP_06062978.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
gi|262315718|gb|EEY96757.1| long-chain fatty-acid-CoA ligase [Acinetobacter johnsonii SH046]
Length = 562
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F L+A++Q T+ VP + +A L + S++ + G P E+M+
Sbjct: 280 FNPLETLKAIQQEKCTAAYGVPTMF--IAILEHEQFDDFDLSSLRTGIMAGSPCPREIMQ 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ YGMTET+ P + + T +SV Q G V
Sbjct: 338 RVIDRMHMSEITICYGMTETA-------------------PVSAQSSTSDSVEQRVGT-V 377
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + +G + RG VML YW+ V W+ TGDI
Sbjct: 378 GRVHPHLEIKIVDEQGKVVPRGQLGELCVRGYSVMLGYWEDHEKSQEVIDSARWMHTGDI 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V + GR + GGEN++P+E+E L HP + + V+G+ +AR E + A
Sbjct: 438 AEMDEAGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVIGLPDARYGEELCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ L E + +E E +RQ+C E +++ K PR +V + FP+T+
Sbjct: 498 CIILHEHHEITE----------------ESIRQYCAE-HISHNKVPR-YVRFFNEFPMTA 539
Query: 311 TGKIRR 316
+GK ++
Sbjct: 540 SGKAQK 545
>gi|388566015|ref|ZP_10152492.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
gi|388266745|gb|EIK92258.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
Length = 517
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 153/334 (45%), Gaps = 59/334 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRD 57
A+ + G HV +PKF++ A EA++ H V ++ VP + M + R T
Sbjct: 217 FALTLAGGTHVCLPKFDAVLAFEAIQTHQVNYVLFVPTMINMMLNHPDFDRYDLT----- 271
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS---SLTFMTLYDPTLETPGQ 114
SV+ G +P ++ A + P + I YGMTET++ SL + +D
Sbjct: 272 SVRYCEYGASPIPDAVLAAAIDKLPSWEFIQGYGMTETAALTVSLPWRYHFD-------- 323
Query: 115 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 169
G P+ H G+ A V++++ + G I RGA VML YW
Sbjct: 324 -----GEHGPHKRH-----AAGRAAYGVDVRIVDPDGKELPRGTPGEIAVRGAQVMLGYW 373
Query: 170 DQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 226
+ KP + + W+ TGD +D+ G + +V R I SGGEN+Y EVE +
Sbjct: 374 N----KPEATAAAIRDGWMHTGDGAWMDEDGFITIVDRVKDMIISGGENIYSREVENAVH 429
Query: 227 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 286
HP + V+G+ + + E V+A V L++ QS +E++ HCR
Sbjct: 430 AHPAVRECAVIGVPDEKWGEAVMAVVALKDG---------QSVSEQEII-------DHCR 473
Query: 287 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ + +K PR V +R+ PL+ GKI ++ +R
Sbjct: 474 -RLIANYKCPRR-VEFREALPLSGAGKIMKNVLR 505
>gi|357021891|ref|ZP_09084122.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
gi|356479639|gb|EHI12776.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
Length = 493
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 42/320 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F+++ ++ VE+ +T L P + L +R K +++
Sbjct: 216 IASFLRGATMVPVAVFDAEQVVDLVERERITMLPGPPTLYHSLLA-VRDKDKLA---TLR 271
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ + P L++ YG+TE + TL PG P+
Sbjct: 272 AAVTGAADIPVELIRRIRDELPFRSLMTGYGLTEAGNV---------TLSRPGDTPEQVA 322
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
G P VE+++ +DG +L RG VM Y D
Sbjct: 323 T------------TAGLPCEDVEVRIAADGE-----VLVRGYGVMQGYLDDPAGTAQAID 365
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+GS DD G + +VGR+ GG N YP E+E L++HP + V+G+
Sbjct: 366 PDGWLHTGDLGSFDDTGRLRIVGRKKDMFIVGGFNAYPAEIEGFLMEHPAVAQAAVIGVP 425
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A + L S + ++ +S+E + + R++ + G+K PR V
Sbjct: 426 DERLGQVGKAFIVLDASARRADGPT----------VSAEDIIEWSRQR-MAGYKVPR-HV 473
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+R PL +TGK+ ++++R
Sbjct: 474 EFRDALPLNATGKVVKEQLR 493
>gi|421154052|ref|ZP_15613578.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
gi|404522671|gb|EKA33148.1| AMP-binding domain protein [Pseudomonas aeruginosa ATCC 14886]
Length = 564
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEDI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFRFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|381196620|ref|ZP_09903962.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
lwoffii WJ10621]
Length = 562
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 45/306 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F L+A++Q T+ VP + +A L + S++ + G P E+M+
Sbjct: 280 FNPLETLKAIQQEKCTAAYGVPTMF--IAILEHEQFDDFDLSSLRTGIMAGSPCPREIMQ 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ YGMTET+ P + + T +SV Q G V
Sbjct: 338 RVIDRMHMSEITICYGMTETA-------------------PVSAQSSTSDSVEQRVGT-V 377
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + +G + RG VML YW+ V W+ TGDI
Sbjct: 378 GRVHPHLEIKIVDEQGKVVPRGQLGELCVRGYSVMLGYWEDHEKSQEVIDSARWMHTGDI 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V + GR + GGEN++P+E+E L HP + + V+G+ +AR E + A
Sbjct: 438 AEMDEAGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVIGLPDARYGEELCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ L E + +E E +RQ+C E +++ K PR +V + FP+T+
Sbjct: 498 CIILHEHHEITE----------------ESIRQYCAE-HISHNKVPR-YVRFFNEFPMTA 539
Query: 311 TGKIRR 316
+GK ++
Sbjct: 540 SGKAQK 545
>gi|46199367|ref|YP_005034.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46196992|gb|AAS81407.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 548
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 154/327 (47%), Gaps = 47/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +P+ E K+ +EA+E+H VT VP + +++ + SV+ +
Sbjct: 262 LLGGAKLVLLPRPEIKAIVEAIEKHQVTLFPGVPTLYVAFNNFPGIER--RDLKSVRACI 319
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E + E AKL+ YG+TE S LY G+ + G+
Sbjct: 320 SGSAPLPLE-VAERFERLTGAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS-- 367
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSV 178
VG P P V+ KV + VG + +G +VM YW++ +
Sbjct: 368 -----------VGLPFPGVDAKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETQK 415
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 416 TLKDGWLFTGDLAKMDQDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 475
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ +Q S D + + CR+ NL +K PR+
Sbjct: 476 VPDPYRGETVAAFLVLKPEYQGKVSEKD--------------IERFCRQ-NLAAYKVPRI 520
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +R+ P +S GKI + E+++EV +
Sbjct: 521 -IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|226365555|ref|YP_002783338.1| AMP-binding domain protein [Rhodococcus opacus B4]
gi|226244045|dbj|BAH54393.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 545
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 147/316 (46%), Gaps = 45/316 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ K+ L+AVE TSL VP + +A L S++ + G P E+MK
Sbjct: 264 FDPKATLQAVEAEKCTSLYGVPTMF--IAELADHDFDSYDLSSLRTGIMAGSPCPVEVMK 321
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ YGMTETS P + + +++ Q + V
Sbjct: 322 HVIELMGMAEVSICYGMTETS-------------------PVSLQTRSNDTIDQ-RVSTV 361
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + G + TRG VML YW+ W+ TGD
Sbjct: 362 GRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGD 421
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
IG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++
Sbjct: 422 IGVMDCDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELM 481
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
VR++E + E L +++V R+ C K L +K P+ +V FP+T
Sbjct: 482 VWVRMKE--------------DTEPLDAAKV-REFCTGK-LAHYKIPK-YVHVVDEFPMT 524
Query: 310 STGKIRRDEVRREVMS 325
TGK+R+ E+R + +S
Sbjct: 525 VTGKVRKVEMREQSLS 540
>gi|138895109|ref|YP_001125562.1| AMP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196248309|ref|ZP_03147010.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|134266622|gb|ABO66817.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|196212034|gb|EDY06792.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 544
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 151/329 (45%), Gaps = 52/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K LE V T+L VP + +A L S++
Sbjct: 248 LACVTVGATMVPVVEFHPKRVLETVAAERCTALHGVPTMF--IAELNDPDFDQYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK N + AYG TE+S +T DP +ET
Sbjct: 306 TGIMAGSPCPVEVMKAVINKMGMTDITIAYGQTESSPVITQTRTDDPIELRVET------ 359
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ P VE+K+ G+ + G + TRG HVM Y++
Sbjct: 360 -----------------VGRALPGVEVKIVEPGTCNEVPRGVQGELCTRGYHVMKGYYNN 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A + WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I
Sbjct: 403 PEATNEAIDEDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKI 462
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + R E V+A + L++ ++E +R+ CR N++
Sbjct: 463 LDVQVVGVPDERYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNIS 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR ++ + +P+T++GKI++ ++R
Sbjct: 506 RHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|289448150|ref|ZP_06437894.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
gi|289421108|gb|EFD18309.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
Length = 547
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 47/322 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AV+ TSL P + +A L T S++ + G P E+
Sbjct: 263 PGFDPAATLRAVQDERCTSLYGAPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + + YGMTETS P + +SV + G
Sbjct: 321 MRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT 361
Query: 134 CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + VG TRG VM YW+ V + W+ T
Sbjct: 362 -VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 421 GDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPF 306
++A V+LR N L+ E LR++C + + FK PR LW F
Sbjct: 481 LMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEF 522
Query: 307 PLTSTGKIRRDEVRREVMSHLK 328
P+T TGK+R+ E+R++ + +L+
Sbjct: 523 PMTVTGKVRKVEMRQQALEYLR 544
>gi|386058544|ref|YP_005975066.1| AMP-binding protein [Pseudomonas aeruginosa M18]
gi|347304850|gb|AEO74964.1| AMP-binding domain protein [Pseudomonas aeruginosa M18]
Length = 564
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 144/322 (44%), Gaps = 45/322 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L AV + T+L VP + +A L ++ S++ + G P E+
Sbjct: 276 PSFDAEATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ A++ AYGMTETS ++ T D LE VT
Sbjct: 334 MRRVIGDMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT---------- 373
Query: 134 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ P +E K+ +G + TRG VML YW+ A W+ TG
Sbjct: 374 TVGRTQPRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMRTG 433
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +DD G V +VGR I GGEN+YP E+E HP + + V+GI + R E +
Sbjct: 434 DLAVMDDDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEI 493
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
VA ++L + E LR C+ + + FK PR F + FP+
Sbjct: 494 VAWIKLHPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPM 535
Query: 309 TSTGKIRRDEVRREVMSHLKSL 330
T TGKI++ +R + ++ L
Sbjct: 536 TVTGKIQKFRMREISIEEIRLL 557
>gi|302522672|ref|ZP_07275014.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
gi|302431567|gb|EFL03383.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
Length = 538
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 249 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 350
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 351 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 407 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 467 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 510
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
VL FP+T +GK+R+ E+R
Sbjct: 511 EVL--GTFPMTVSGKVRKIELR 530
>gi|398310927|ref|ZP_10514401.1| AMP-binding domain protein [Bacillus mojavensis RO-H-1]
Length = 548
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 47/339 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +FE + L+ VE T+L VP + +A L S++
Sbjct: 251 LACVSVGAAMVPVVEFEPATVLKTVENEKCTALHGVPTMF--IAELHHQNFDSYDLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSSCPSEVMKAVIEKMGMTDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N Q + G+ P VE+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFQRRVETTGRALPEVEVKIVEPGTFQEVQRGVQGELCTRGYHVMKGYYKDKDA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP I+ +
Sbjct: 409 TQKAINPDGWLFTGDLAVMDEDGYCRVTGRLKDMLIRGGENIYPREIEEFLYRHPNILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E A ++L+E S E L+ +C+ K + K
Sbjct: 469 QVVGVPDEKYGEEAAAWIKLKEGKT----------------ASPEELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
PR F+ + +P+T++GKI++ ++R + + L LPS+
Sbjct: 512 IPRYFI-FTDEYPMTASGKIQKYKLREKTI-QLFHLPSS 548
>gi|367470281|ref|ZP_09469993.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
gi|365814636|gb|EHN09822.1| Acetoacetyl-CoA synthetase [Patulibacter sp. I11]
Length = 543
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A L GAC V IP F+ + L A TSL VP + +A L +
Sbjct: 242 LAALAHGAC-VVIPAQAFDPAATLRAAAAERCTSLYGVPTMF--IAMLADPSFDEHDLST 298
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P+E+M++ + ++ YGMTETS T DP L Q
Sbjct: 299 LRTGIMAGSPCPAEVMRQVIDRMHMGEVTICYGMTETSPVSTQTAADDP-------LEQR 351
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQF 172
G V G+ PHVE+KV + G + TRG VM YW+
Sbjct: 352 VGTV-------------GRVHPHVEVKVVDPATGETVPRGETGELCTRGYSVMRGYWNDP 398
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
G+ W+ TGD+ +ID+ G + +VGR I GGENVYP E+E L HP +
Sbjct: 399 GKTAEAIDGDGWMHTGDLATIDEQGYLRIVGRSKDMIIRGGENVYPREIEEFLYTHPDVA 458
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + R E ++A V R + L E +R+ CR +
Sbjct: 459 DVQVIGVPDERFGEEIMAWVIPRAG----------------VALDGERIREFCR-GTIAH 501
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K PR +V FP+T TGK+++ +R + + L
Sbjct: 502 YKVPR-YVHVTDEFPMTVTGKVQKYLMREQAIEQL 535
>gi|71994703|ref|NP_001023939.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
gi|351063226|emb|CCD71312.1| Protein ACS-1, isoform c [Caenorhabditis elegans]
Length = 578
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ + DS++
Sbjct: 272 ALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMIN--HPEYANYNYDSIRS 329
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 330 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 385
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 386 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 434
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 435 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPD 494
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 495 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 538
Query: 302 WRK--PFPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 539 FKKEYEFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 578
>gi|149053895|gb|EDM05712.1| hypothetical protein LOC619561, isoform CRA_b [Rattus norvegicus]
Length = 520
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 50/323 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPS 71
P F K ALEA+ + T L P + D+ + + D +++ + G P
Sbjct: 239 PSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPDFSSYDFTTIRGGVIAGSLAPP 294
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
EL++ + +L+ YG TE +S +TFM + TLE Q G+V
Sbjct: 295 ELIRAIISKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------QKAGSV--------- 338
Query: 132 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
G+ PH E ++ + + + G + RG VM YW + + W
Sbjct: 339 ----GRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFETVGQDRWY 394
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGDI S+D+ G +VGR I GGEN+YP E+E +HP + VVG+ + R+
Sbjct: 395 RTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVVGVKDDRMG 454
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E + AC+RL+ +E E ++ C+ K ++ FK PR ++++ +
Sbjct: 455 EEICACIRLKSGETTTE----------------EEIKAFCKGK-ISHFKIPR-YIVFVEG 496
Query: 306 FPLTSTGKIRRDEVRREVMSHLK 328
+PLT +GKI++ ++R ++ HLK
Sbjct: 497 YPLTVSGKIQKFKLREQMEQHLK 519
>gi|348522504|ref|XP_003448764.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 576
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 46/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
++ K+ L A+E T + P + D+ + K SV+ + G P EL+K
Sbjct: 297 YDGKANLAAIESERCTFIYGTPTMYVDMVNQPDLAKY--DLSSVEGGIMAGSPCPQELVK 354
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ ++ YG TE +S +TF+ +P + + V
Sbjct: 355 KVASNLGVKEITIGYGTTE-NSPVTFLA-------------------SPLDNVERKTETV 394
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E K+ + V G I+ RG VML YWD T + W TGD
Sbjct: 395 GYITDHLEAKIVDPTTGMVVPLGTSGEIMIRGYCVMLEYWDDKAKTDECITKDRWYKTGD 454
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
IG +D G + GR I GGENVYP E+E L HP + VVG+ + R+ E +
Sbjct: 455 IGRMDAYGYCRIDGRIKDLIIRGGENVYPAEIEQFLHTHPKVKEAQVVGVKDERMGEEIC 514
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC++L + ++C ++E ++ +C+ + ++ FK PR ++L+ +PLT
Sbjct: 515 ACIKLVDG-----ADC-----------TAEEIKAYCKGQ-ISHFKIPR-YILFVTSYPLT 556
Query: 310 STGKIRRDEVRREVMSHLK 328
TGKI+++++R +V LK
Sbjct: 557 ITGKIQKNKLREQVEKQLK 575
>gi|318057799|ref|ZP_07976522.1| AMP-binding domain protein [Streptomyces sp. SA3_actG]
gi|318080550|ref|ZP_07987882.1| AMP-binding domain protein [Streptomyces sp. SA3_actF]
Length = 544
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 255 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 312
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 412
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 413 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 472
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 473 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 516
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
VL FP+T +GK+R+ E+R
Sbjct: 517 EVL--GTFPMTVSGKVRKIELR 536
>gi|94314357|ref|YP_587566.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358209|gb|ABF12297.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 515
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 59/326 (18%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNG 65
A V +P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+ G
Sbjct: 225 ATQVILPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNIIYG 280
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
+ L++ A P ++ + AYGMTETS + +
Sbjct: 281 AAPIDGALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------ADCH 322
Query: 126 SVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
V P+ G+PAP E+++ C G+ VG + RG VML YW+ KP
Sbjct: 323 VVGSPRLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----KPE 376
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W+ TGD G +D G +++ R I SGGENVY EVE +L HP +
Sbjct: 377 ETARALRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLC 436
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI + + E V A + +R + LS + + HCRE+ + +K
Sbjct: 437 AVIGIPDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IASYK 479
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V +R PL++ GK+ + ++R
Sbjct: 480 CPR-SVEFRADMPLSAAGKLLKYKLR 504
>gi|333023626|ref|ZP_08451690.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
gi|332743478|gb|EGJ73919.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
Length = 544
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE+++ LEAVE+ T+L VP + +A L S++ +
Sbjct: 255 GACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMA 312
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVV 412
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 413 DPGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGV 472
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 473 PDARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRV 516
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
VL FP+T +GK+R+ E+R
Sbjct: 517 EVL--GTFPMTVSGKVRKIELR 536
>gi|291228112|ref|XP_002734032.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 621
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 146/332 (43%), Gaps = 61/332 (18%)
Query: 16 FESKSALEAVEQ----------HCV---TSLITVPAIMADLATLIRVKKTWKGRDSVKKI 62
FE + L+A+E HC+ TS P + DL K S+
Sbjct: 328 FEPEETLKAIENERLISCLYVCHCLFRCTSQYGTPTMFIDLLHHPHFDKY--DMSSLFTG 385
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT-LYDPTLETPGQLPQAFGN 121
+ GG P E MK+ ++ YG+TETS +TF T +DP
Sbjct: 386 IMGGSPCPIETMKQVITKMNMKEVTICYGLTETSP-ITFQTSRFDPI------------- 431
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 175
+ + +GKP H E K+ S H+ G + TRG ML YW
Sbjct: 432 -------ELRVSTIGKPVSHTEAKIIDPESGHIKAVETPGEMCTRGFSTMLGYWGDEEKT 484
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
S+ + WL GDI +D+ G +VGR N I GGEN+YP E+E L +HP I +
Sbjct: 485 KSIIGSDRWLHNGDIAVMDETGYCRIVGRMNDMIIRGGENIYPVEIEKFLYKHPKIEDVQ 544
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ + RL E+V A ++L+ + SE ++ C + + FK
Sbjct: 545 VIGVPDERLGEVVCAWIKLKAAQTASEHE----------------IKDFC-QGQIAYFKI 587
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
P+ ++ + FP+T +GKI++ ++R E + L
Sbjct: 588 PQ-YICFVDSFPMTISGKIKKLQMREESLGML 618
>gi|119899356|ref|YP_934569.1| AMP-binding protein [Azoarcus sp. BH72]
gi|119671769|emb|CAL95683.1| Long-chain fatty-acid-CoA ligase [Azoarcus sp. BH72]
Length = 562
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 152/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GA V+ + FE ++ L+ + + T+ VP + +A L ++
Sbjct: 262 LGCLTHGATMVYPAEAFEPQAVLKTLAEERCTAAYGVPTMF--IAVLDHPDFAAADLSAL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS ++F + D LE
Sbjct: 320 RTGIMAGSPCPIEVMKRVVDKMHMKEVTIAYGMTETSP-VSFQSGTDDPLER-------- 370
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ PH E+K+ + V G + TRG VML YWD
Sbjct: 371 -----------RVSTVGRIQPHCEVKIIDNDGRIVPRGMPGELCTRGYSVMLGYWDDEAK 419
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I+ +
Sbjct: 420 TREALDAAGWMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYRHPQILDV 479
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E + A + LRE + LS+ +R +C + + +K
Sbjct: 480 QVVGVPDQKYGEELCAWIILREGAE----------------LSANDVRAYC-QGQIAHYK 522
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR ++ + FP+T TGKI++ ++R ++ L
Sbjct: 523 IPR-YIKFVDSFPMTVTGKIQKFQIREQMKREL 554
>gi|375139821|ref|YP_005000470.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820442|gb|AEV73255.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 541
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 142/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L+A+E+ T + VP + +A L + + S++ + G P E+
Sbjct: 255 PAFDPALTLDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK N ++ AYGMTETS ++ TL D LE +
Sbjct: 313 MKRCVNDMNMTEVAIAYGMTETSP-VSCQTLIDDDLER-------------------RTG 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + + G TRG VML YW+ E W+ T
Sbjct: 353 SIGRAHPHVEIKIVDPDTGDIVERGQTGEFCTRGYSVMLGYWEDRAKTDEAIDPEGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G +VGR + GGEN+YP E+E L HP + V+G+ + + E
Sbjct: 413 GDLAVMRDDGYCNVVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
V A VR+ K L ++ LR +K L +K PR +V FP
Sbjct: 473 VCAWVRM---------------KPGRTPLDAQALRDFASDK-LAHYKIPR-YVHVVDEFP 515
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ ++R + + L
Sbjct: 516 MTVTGKVRKVDMRADTVRLL 535
>gi|149053894|gb|EDM05711.1| hypothetical protein LOC619561, isoform CRA_a [Rattus norvegicus]
Length = 532
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 152/331 (45%), Gaps = 54/331 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLA----------TLIRVKKTWKGRDSVKKIL 63
P F K ALEA+ + T L P + D+ T IR + + + + +
Sbjct: 239 PSFNGKKALEAISREKGTLLYGTPTMFVDILNQPDFSSYDFTTIRGGEVPSKAERLGEGV 298
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P EL++ + +L+ YG TE +S +TFM + TLE Q G+V
Sbjct: 299 IAGSLAPPELIRAIISKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE------QKAGSV- 350
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 177
G+ PH E ++ + + + G + RG VM YW +
Sbjct: 351 ------------GRIMPHTEAQIVNMETGELTKLNMPGELCIRGYCVMQGYWGEPQKTFE 398
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W TGDI S+D+ G +VGR I GGEN+YP E+E +HP + VV
Sbjct: 399 TVGQDRWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEAQVV 458
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + R+ E + AC+RL+ +E E ++ C+ K ++ FK PR
Sbjct: 459 GVKDDRMGEEICACIRLKSGETTTE----------------EEIKAFCKGK-ISHFKIPR 501
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 502 -YIVFVEGYPLTVSGKIQKFKLREQMEQHLK 531
>gi|374607539|ref|ZP_09680340.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555375|gb|EHP81945.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 1055
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ LEA+E+ T+L VP + +A L K + S++ + G P ELMK
Sbjct: 775 FDPAVTLEAIEKERCTALYGVPTMF--IAMLGHPKLGQRDLSSLRTGIMAGATCPMELMK 832
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++L AYGMTETS ++ TL D L+ + V
Sbjct: 833 RCVDELNMSELAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTATV 872
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+++ + G TRG VML YW+ + W+ TGD
Sbjct: 873 GRAHPHVEIRIVDPDTGKTVKRGEPGEFCTRGYSVMLGYWNDDDRTREAVDADGWMHTGD 932
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ + D G ++GR + GGENVYP EVE L HP I V+G+ + + E +
Sbjct: 933 LAVMRDDGYCMVIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDAQVIGVPDEKYGEEIC 992
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A +R+R + L ++ +R K L +K PR +V FP+T
Sbjct: 993 AWIRMR---------------SGRTPLDADAVRAFASGK-LAHYKIPR-YVRVVDEFPMT 1035
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+R+ ++R E + L
Sbjct: 1036 VTGKVRKVDMRTETVRLL 1053
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 48/329 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+ M + G V P F+ + ++ + VTS PA + L ++ R
Sbjct: 225 LPMFLNGGTAVIPPSGGFDPAAIVDTIVDEHVTSCWMTPAQWQTVCALPDLQSRDLSR-- 282
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++++ G + L++ ++F A++I+A+G TE S +T + + + G
Sbjct: 283 LRRVWWGAAPASTALLRSMIDAFGHAEIIAAFGQTE-CSPITCLLRGEDAIRKIGS---- 337
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 173
VG P +VE ++ D VG I+ G VM YW++
Sbjct: 338 ----------------VGTPMLNVETRIVDDQMNDVAKGEVGEIVYLGPLVMKEYWEKEA 381
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
G W +GD+ D G +++V R+ I SGGEN+Y EVE L +
Sbjct: 382 ETAEAFRGG-WFHSGDLVRQDSDGYIYVVDRKKDMIISGGENIYCAEVENALATCAKVAE 440
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ ++G+ + + E +A V R+ D + ++ + HCR+ +L +
Sbjct: 441 VAIIGVPDPKWGETPMAVVVPRDP-------ADPPTDDE--------IEAHCRQ-HLARY 484
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR + P ++GK+ + +R+E
Sbjct: 485 KHPRRLAIV-DALPRNASGKVLKTRLRQE 512
>gi|224825723|ref|ZP_03698827.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601947|gb|EEG08126.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 562
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L G +F + FE + L+ V + T+L VP + ++ L + + ++
Sbjct: 262 LACLTHGTTMIFPSEAFEPLAVLQTVAEEKCTALHGVPTMF--ISVLDHPRFSEFDLSTL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK ++ ++ AYGMTETS P +F
Sbjct: 320 RTGIMAGSPCPIEVMKRVVDTMHMKEVTIAYGMTETS-------------------PVSF 360
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ T V + VG PH+E+K+ DG + G +LTRG VML YWD
Sbjct: 361 QSATDTPVERKVST-VGLIHPHLEVKIV-DGEGRIVPRGETGELLTRGYSVMLGYWDDEP 418
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ ID+ G +VGR + GGENVYP E+E L +HP I
Sbjct: 419 KTREAIDPAGWMHTGDLAVIDEAGYCNIVGRAKDMVIRGGENVYPREIEEFLYRHPKIQD 478
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ + R E + A +RLR+ S++ +R C + + +
Sbjct: 479 VQVIGVPDDRFGEELCAWIRLRDGET----------------ASADEIRAFC-QGQIAHY 521
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ +R+++ L
Sbjct: 522 KIPR-YIEFVDSFPMTITGKIQKFMMRQQMKEKL 554
>gi|359425223|ref|ZP_09216323.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239311|dbj|GAB05905.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 551
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 44/326 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++ L AVE+H TSL VP + +A+L L S++ + G P
Sbjct: 263 PAFDPEATLRAVERHRCTSLYGVPTMFIAELDLLDHAGSAAYDLSSLRTGIMAGSPCPEA 322
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M+ + +++ YGMTETS ++ T D LE +
Sbjct: 323 VMRRVVDEMHMSQVSICYGMTETSP-VSMQTRTDDPLEL-------------------RV 362
Query: 133 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH+E+K+ + VG TRG VM YWDQ + W+
Sbjct: 363 GTVGRVGPHLEIKMIDPVTGETVPRGRVGEFCTRGYSVMKGYWDQPDKTAEAIDADGWMR 422
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+ + + G V + GR + GGEN+YP E+E L HP I+ V+G+ + E
Sbjct: 423 TGDLAVMRENGYVEITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDDSYGE 482
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A +RLR D +S L+ E +R+ K + K PR +V + F
Sbjct: 483 ELMAWIRLR----------DGASG-----LTVEQVREFATGK-IARHKIPR-YVHIVEAF 525
Query: 307 PLTSTGKIRRDEVRREVMSHLKSLPS 332
P+T TGKIR+ +R E M L PS
Sbjct: 526 PMTVTGKIRKVAMREESMGLLGDPPS 551
>gi|341880983|gb|EGT36918.1| hypothetical protein CAEBREN_11693 [Caenorhabditis brenneri]
Length = 597
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ DS++
Sbjct: 291 ALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMINHPEYGNY--NYDSIRS 348
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 349 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 404
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 405 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 453
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 454 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPD 513
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 514 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 557
Query: 302 WRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 558 FKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 597
>gi|226187505|dbj|BAH35609.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 515
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 156/323 (48%), Gaps = 47/323 (14%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-VKKTWKGRDSVKKILN 64
VGA V P FE +AL +EQH VTS++ VP + + LIR +T + S+ +
Sbjct: 224 VGATLVIQPSFEPATALRLIEQHKVTSMLLVPTM---IQMLIRHPDRTNRDLSSILAVQY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + L+++A +FP+A + YGMTE LT ++ D
Sbjct: 281 GASPISETLLRQAQQAFPQAAFMQGYGMTEAGPGLTSLSAED------------------ 322
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
V + G+P HVE++V + + VG I+ RG ++M YW++ S +
Sbjct: 323 -HVDATRLKSAGRPMGHVEIQVVDENGNELPRGEVGEIIARGGNIMCGYWNRPEETRS-A 380
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL TGD G +D+ G +++V R I SGGENVY EVE L HP +I V+G+
Sbjct: 381 LRDGWLYTGDGGYMDEAGYLFVVDRLKDMIISGGENVYSTEVENALATHPDVISCAVIGV 440
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A + +R + L+ E +R H + + G+K+PR
Sbjct: 441 PDDQYGERVHAVLVVRPG----------------VSLTCEEVRAHSKTL-IAGYKSPRSI 483
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
+ + P++ GKI + E+RR+
Sbjct: 484 TIVEQ-MPVSPAGKILKRELRRQ 505
>gi|392419993|ref|YP_006456597.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
gi|390982181|gb|AFM32174.1| AMP-binding domain protein [Pseudomonas stutzeri CCUG 29243]
Length = 560
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE +AL+A + T + VP + +A L ++ S++ + G P E+MK
Sbjct: 278 FEPLAALQAAAEEKATGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS T T D L+ VT V
Sbjct: 336 RVIDDMHLAEMQIAYGMTETSPVST-QTSADDDLDR---------RVT----------SV 375
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + + +G + TRG VML YW+ A G W+ TGD+
Sbjct: 376 GRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G + +VGR I GGENVYP E+E L HP + + V+G+ +++ E +VA
Sbjct: 436 AVMDDEGYIKIVGRNKDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+L Q + +E LR+ C+ + + FK PR + + FP+T
Sbjct: 496 WVKLHPGHQ----------------VEAEALREFCKGR-IAHFKTPR-HIKFVDDFPMTI 537
Query: 311 TGKIRRDEVR 320
+GK+++ +R
Sbjct: 538 SGKVQKFRMR 547
>gi|365897486|ref|ZP_09435486.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
gi|365421742|emb|CCE08028.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
Length = 536
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 147/335 (43%), Gaps = 58/335 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRD 57
+ L G HV P F++ L +E+ T VP + M D L R +
Sbjct: 243 LGALQTGGTHVLPPGFDADLMLRLIEEERGTISGGVPTMLGRMLDSPALDRHDLS----- 297
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S +K++ GG +P EL++ A ++ +G TE S +T
Sbjct: 298 SWRKVMLGGAPVPPELVRRAQAR--GLTVVIGFGQTEASPYVT----------------- 338
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
+ P+ H VG+P P E+K+ S +G I RG VM Y++
Sbjct: 339 ---HTLPDDPHPDWITTVGRPLPQTEIKIIDPDSGETLPRGRIGEICARGYSVMKDYFND 395
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
S + WL TGD+GS+DD G + GRR I GGEN+YP E+E VL HP +
Sbjct: 396 PQGTASAIDADGWLHTGDLGSLDDYGYCRVQGRRRDLIIRGGENIYPREIEDVLHTHPAV 455
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVGI +A E+ V V L+ +Q EL+ Q CR + L
Sbjct: 456 LDASVVGIPDADWGEVPVGFVILKP---------NQQGDADELM-------QFCRAR-LA 498
Query: 292 GFKAPRLFVLWR--KPFPLTSTGKIRRDEVRREVM 324
+K PR WR FP T++GKI++ ++R + +
Sbjct: 499 SYKVPR---TWRFVAQFPQTASGKIQKFKLRDDYL 530
>gi|403725356|ref|ZP_10946493.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403205107|dbj|GAB90824.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 528
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 41/326 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + + + L+ + + VT VPA+ RV + +V+
Sbjct: 229 LAGISVGAQTIVVRDVDPSAVLDEIVERKVTHAFFVPAVFGFFLEEPRVAD--RDYSAVR 286
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ GG +P M+ ++P A YGMTE S + + D
Sbjct: 287 CLGYGGSPMPLPTMRACLETWPDADFYQVYGMTEMSGVFSVLGPEDHR------------ 334
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAK 175
+ H + V G+P P V + V DG++ +G + ML YW A
Sbjct: 335 ----DLAHPERLVSAGRPLPGVTVTVVDRDGNALAPGSIGEFWVQSKQHMLGYWGNPEAT 390
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
G+ WL TGD G +DD G +++ R I SGGEN+YP EVE V++++P + +
Sbjct: 391 SKTLVGDDWLRTGDAGLLDDDGYLYISDRVKDMIISGGENIYPAEVERVIIENPAVADVA 450
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ + + E V A V L + D S+ + EL+ +CRE+ L G+K
Sbjct: 451 VIGVPDEKWGETVKAVVVLAD---------DASTTDVELI-------AYCRER-LAGYKT 493
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
P+ V + P STGKI + E+R+
Sbjct: 494 PKS-VEFLSALPRNSTGKILKRELRK 518
>gi|118465556|ref|YP_882835.1| acyl-CoA dehydrogenase [Mycobacterium avium 104]
gi|118166843|gb|ABK67740.1| putative acyl-CoA dehydrogenase [Mycobacterium avium 104]
Length = 510
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 149/327 (45%), Gaps = 49/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A +G V +P + + L AV V+ ++TVPAI A L+ K + G +
Sbjct: 222 LAAARLGGASVILPALDLDTLLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTNVSR 277
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 278 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 319
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
V P+ VG P V+L + D VG ++TRG +V YW++ A
Sbjct: 320 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGGNVTAGYWNRPQATA 376
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 377 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 435
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 436 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 476
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ + P P + GK+ + +R +V
Sbjct: 477 QYITVVDGPLPRNAGGKLLKARLRDQV 503
>gi|398841820|ref|ZP_10599027.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
gi|398107306|gb|EJL97309.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM102]
Length = 564
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 45/321 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSLP 331
TGKI++ +R + LK++P
Sbjct: 544 TGKIQKFRMREISIEVLKAIP 564
>gi|375141237|ref|YP_005001886.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821858|gb|AEV74671.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 545
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ +AL AVE+ T+L VP + +A L S++ + G P ELMK
Sbjct: 263 FDPAAALAAVEKERCTALYGVPTMF--IAMLGHPDLGEHDLSSLRTGIMAGATCPMELMK 320
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++L AYGMTETS ++ TL D L+ + V
Sbjct: 321 RCVSELNMSELAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTATV 360
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+++ + + G TRG VML YWD + W+ TGD
Sbjct: 361 GRAHPHVEIRIVDPETGRITKRGEPGEFCTRGYSVMLGYWDDDDRTREAVDSDGWMRTGD 420
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ + D G ++GR + GGENVYP EVE L HP I + V+G+ + + E +
Sbjct: 421 LAVMRDDGYCMIIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDVQVIGVPDTKYGEEIC 480
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A +R+R + C L ++ +R + L +K PR +V FP+T
Sbjct: 481 AWIRMR-------AGCTP--------LDADGVRAFASGR-LAHYKIPR-YVHIVDEFPMT 523
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+R+ ++R E + L
Sbjct: 524 VTGKVRKVDMRTETVRLL 541
>gi|254517286|ref|ZP_05129343.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
gi|219674124|gb|EED30493.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
Length = 519
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 40/320 (12%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
G CH F+P F+ ++ +E +T + VP ++ LA + +++ + G
Sbjct: 224 GLCHTFLPAFDPVKVMDLIEGEQITHTLMVPTMLGMLANHPDFDP--QRLRTLRSVAYGA 281
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P LM P + YG TE + +T + + TLE P
Sbjct: 282 SPMPEGLMLNLLEVLPWIGWMQGYGQTEMAPIITLLAAENHTLEGP-------------- 327
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
H + G+ P VE+++C D + VG I+ R ML YW++ + + +
Sbjct: 328 -HAGKLRSAGRAGPGVEIRICDDQGNDLPNGEVGEIVARSPGSMLGYWNR-PEQTADTLK 385
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W++TGD DD G +++V R I +GGENV+ EVE + HP + + V+GI +
Sbjct: 386 DGWVNTGDGAYRDDDGFIFIVDRLKDMIVTGGENVFSAEVENAVSTHPAVAAVSVIGIPD 445
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
+ E V A V L E Q++ +ELL +H + +K PR
Sbjct: 446 EKWGEAVHAIVILHEG---------QTATAEELL-------EHTVPV-IANYKRPRSISF 488
Query: 302 WRKPFPLTSTGKIRRDEVRR 321
+PFPL+ GKI + E+R+
Sbjct: 489 RTEPFPLSGAGKILKTELRK 508
>gi|398938415|ref|ZP_10667818.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398165963|gb|EJM54073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 564
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 45/321 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L AV + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLTAVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKFVDE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSLP 331
TGKI++ +R + LK++P
Sbjct: 544 TGKIQKFRMREISIEELKAIP 564
>gi|341891057|gb|EGT46992.1| hypothetical protein CAEBREN_25008 [Caenorhabditis brenneri]
Length = 633
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + C P F++ +AL+A+ + T+L P + D+ DS++
Sbjct: 327 ALTHLQTCVFPAPSFDALAALQAIHEEKCTALYGTPTMFIDMINHPEYGNY--NYDSIRS 384
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + + YG TETS ++FM+ D + P Q ++ G+
Sbjct: 385 GFIAGAPCPITLCRRLVQDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGH 440
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ + A V+ + C G ++ RG VM YW+ T
Sbjct: 441 IMDHL-----------EAAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQ 489
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ W TGDI + D G + +VGR I GGEN+YP EVE L +H + + +VG+ +
Sbjct: 490 DRWYHTGDIAVMHDNGTISIVGRSKDMIVRGGENIYPTEVEQFLFKHQSVEDVHIVGVPD 549
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
R E+V A VRL ES E + E ++ C+ K + FK PR ++L
Sbjct: 550 ERFGEVVCAWVRLHES--------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YIL 593
Query: 302 WRKP--FPLTSTGKIRRDEVR---------REVMSHLKSL 330
++K FPLT TGK+++ E+R ++V+SH L
Sbjct: 594 FKKEHQFPLTVTGKVKKFEIREMSKIELGLQQVVSHFSEL 633
>gi|377568916|ref|ZP_09798091.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533823|dbj|GAB43256.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 547
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 44/323 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++ L+AV ++ TSL VP + + S++ + G P +
Sbjct: 262 PAFDPRATLDAVAEYRCTSLYGVPTMFI-AELDLLDDGLDIDLSSLRTGIMAGSPCPEYV 320
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + ++ YGMTETS T + DP + +
Sbjct: 321 MRQVVDRLHMREVSICYGMTETSPVSTQTRVDDPL--------------------ELRVT 360
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ G+ G + TRG VM YW++ + W+ T
Sbjct: 361 TVGRVGPHLEIKIVDPGTGETSGRGVTGELCTRGYSVMTGYWNEPEKTAEAIDADGWMHT 420
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 421 GDLADMDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEE 480
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VRLR D +++ +++ LR+ K + K PR +V + FP
Sbjct: 481 LMAWVRLR----------DTATE-----FTADDLREFATGK-IARHKIPR-YVHVVEEFP 523
Query: 308 LTSTGKIRRDEVRREVMSHLKSL 330
+T TGK+R+ +R E +S L+ L
Sbjct: 524 MTVTGKVRKVAMRDEAVSILEQL 546
>gi|108798485|ref|YP_638682.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119867586|ref|YP_937538.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108768904|gb|ABG07626.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119693675|gb|ABL90748.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 515
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 146/329 (44%), Gaps = 51/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A +VG HV +P F + AVE++ +T + P ++ + S+K
Sbjct: 219 LARNLVGGTHVILPSFTPDAVAVAVERYQITDMFLAPTMIQMFVDSPAAAQ--HDLSSLK 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQ 117
++ G + +++ A P+ KL+ AYGMTE S + T +T DP L
Sbjct: 277 HLIYGASPISQAVLERAMRLLPQVKLLQAYGMTELSPTTTVLTGEEHLDPALLR------ 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 172
G+ P E+K+ + + V G + RG HVML YW++
Sbjct: 331 ----------------SAGRAVPIAEVKIVDEDDNEVPRGTVGEVAARGPHVMLGYWNRP 374
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
G W+ TGD G +DD G +++V R I +GGENVY EVE L QH +
Sbjct: 375 EETAQALRGG-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHASVA 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ +A E V A V L+E + +++ LR HC +
Sbjct: 434 TCAVIGVPDADWGERVHAVVVLQEG----------------MTATAQELRDHCGSL-IAR 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+KAPR V + PLT+ K+ + ++R+
Sbjct: 477 YKAPRT-VDFVDSLPLTAAAKVSKVDLRQ 504
>gi|294633739|ref|ZP_06712297.1| feruloyl-CoA synthetase [Streptomyces sp. e14]
gi|292830381|gb|EFF88732.1| feruloyl-CoA synthetase [Streptomyces sp. e14]
Length = 512
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 148/319 (46%), Gaps = 43/319 (13%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
VG V +P S +A+ ++ L+TVPA+ + L +T V+ +L G
Sbjct: 229 VGGASVIMPALHLPSVAKALTAERISFLVTVPAVYSLLLRQPEFART--DVSGVRSVLYG 286
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G + L++ +FP+A LI+ YGMTET+S +T + PGQ + +
Sbjct: 287 GAPIAPSLVRSLKRAFPQATLINGYGMTETASLITLL---------PGQDAEEHAD---- 333
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS-HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG P V+L V G VG ++ RGA+V YWD+ A + W
Sbjct: 334 --------SVGYAVPSVDLGVVPTGDDPTVGELVVRGANVATGYWDRPKATAETIV-DGW 384
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
L TGDI +DD G V +V R I GGEN+ EVEA LL PG+ V+ + + +
Sbjct: 385 LHTGDIVRVDDAGRVHVVDRIKDIINRGGENISSVEVEAALLCAPGVADAAVLAVPDEVM 444
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E V A + S ++E+ +++ + HCRE +L FK P+ + +
Sbjct: 445 GEKVGAVL---------------FSAHEEIDVAAVI--AHCRE-HLADFKVPQYAAVVTE 486
Query: 305 PFPLTSTGKIRRDEVRREV 323
P + GK+ + +R ++
Sbjct: 487 ALPRNAGGKLLKGRLREQI 505
>gi|381190931|ref|ZP_09898445.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
gi|380451277|gb|EIA38887.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
Length = 560
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E +EA+E+H VT VP + ++K + S++ L
Sbjct: 273 LFSGYKIVLLPRPEIXXIVEAIEKHXVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICL 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K A+LI YG++E S +T +P L G +
Sbjct: 331 SGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNPVL----------GLIK 375
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
S+ G P P VE KV + V G ++ +G +VM YW++ +
Sbjct: 376 KGSI--------GMPFPSVEAKVVDEEGKEVPMGEVGELIVKGPNVMKGYWNR-PEETEK 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 427 ALKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ ++ + D + CR+ NL +K PR+
Sbjct: 487 VPDPYRGETVAAFLVLKXEYRGKVTEKD--------------IEAFCRQ-NLAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 532 -IQFRESLPKSSVGKILRRELREE 554
>gi|313233611|emb|CBY09782.1| unnamed protein product [Oikopleura dioica]
Length = 566
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 48/334 (14%)
Query: 3 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ C + IP F ++ L+A + T P + DL R ++ ++
Sbjct: 270 FMLTRGCKLVIPAPTFNAEVGLDAAQAEGATVWYGTPTMFVDLLASPRRSSFVAPQEGIR 329
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ G P +L+++ + K+ AYG TE +S +TFMT
Sbjct: 330 GLM-AGSICPEQLLRDLDQHY-NCKVFVAYGTTE-NSPITFMT----------------- 369
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
T S + + VG PH E K+ G I RG V Y+++
Sbjct: 370 --TNESTFKQRTTTVGCVMPHTEAKLVDTEHGKTVEMGEKGEICIRGPCVFKGYFNEPEK 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + W TGD+ ++D+ G V +VGR I GGEN+YP EVE+ LL+HP ++
Sbjct: 428 TAEVVDEDGWYHTGDLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVDA 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + RL E V A VRL + L+++ L+Q+ E N+T +K
Sbjct: 488 QVVGVPSKRLGEEVAAYVRLASGAE----------------LTADELKQYGFE-NMTHWK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + +PLT TGKIR+ E+R + K
Sbjct: 531 VPK-YIKVVEEYPLTVTGKIRKVELRENAKNDFK 563
>gi|444430996|ref|ZP_21226167.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443888045|dbj|GAC67888.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 548
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 47/321 (14%)
Query: 14 PKFESKSALEAV-EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ + L AV ++HC TSL VP + +A L T S++ + G P E
Sbjct: 262 PAFDPAATLRAVADEHC-TSLYGVPTMF--IAMLNDPVLTDLDTSSLRTGIMAGSPCPIE 318
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
MK+ ++ ++ YGMTETS P + T +S+H+ +
Sbjct: 319 TMKQVIDTMGIEEISICYGMTETS-------------------PVSAQTRTDDSIHR-RT 358
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG PH+E+ + + + G + TRG VML YW+Q + W+
Sbjct: 359 ATVGAAGPHIEISIVDPVTREILPRGEAGELCTRGYSVMLGYWEQPDKTAEAIDADRWMH 418
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGDI +DD G + + GR + GGEN+YP E+E L+ HP + + V+G+ + + E
Sbjct: 419 TGDIAVMDDDGYLSITGRIKDMVIRGGENLYPREIEEFLITHPDVQDVQVIGVPDEKYGE 478
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A +++R L +R C + L K PR +V F
Sbjct: 479 ELMAWIQMRAG---------------TTALDVHTVRAFC-DGRLARHKIPR-YVHVVDAF 521
Query: 307 PLTSTGKIRRDEVRREVMSHL 327
P+T TGK+R+ E+R + + L
Sbjct: 522 PITITGKVRKVEMRAQAATML 542
>gi|110833045|ref|YP_691904.1| long-chain-fatty-acid-CoA ligase [Alcanivorax borkumensis SK2]
gi|110646156|emb|CAL15632.1| long-chain-fatty-acid-CoA ligase, putative [Alcanivorax borkumensis
SK2]
Length = 516
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 49/328 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ + H +P+F+ L +E+ +T + VP ++ LA+ R+ S++
Sbjct: 218 FAVTLAAGTHGIVPRFDVDEVLAFIEREKITDALLVPTMVNLLASSGRIAN--YDVSSIR 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQA 118
++L G +P ++ A PKA YG TE S +T + P G +L A
Sbjct: 276 RMLYGASPMPEAVLISAMEQMPKASFAQGYGQTEASPIITTLA---PEFHVAGGEKLRSA 332
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD-QF 172
G+ A VE+ V ++ V G I RG +VM YW +
Sbjct: 333 -----------------GRAALGVEVMVVNENDEEVPRGTVGEICVRGGNVMRGYWGMES 375
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ ++ G WL TGD+ +D+ G V++V R + SGGEN++ EVE + H +
Sbjct: 376 TTEETLRNG--WLHTGDLAYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHSAVQ 433
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+GI + + E V A V L E SE++ + HCREK + G
Sbjct: 434 ECAVIGIPDEKWGESVHAIVVLCEGSSASETD----------------IIDHCREK-IAG 476
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR +P P++ GK+ ++E+R
Sbjct: 477 YKVPRSIEFRSEPLPISGAGKVLKNELR 504
>gi|441518306|ref|ZP_21000030.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454840|dbj|GAC57991.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 507
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 144/335 (42%), Gaps = 79/335 (23%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-----------ADLATLIRVKKTWKGR 56
+ HV +P F +EA+E+H V + VP ++ ADL++LI
Sbjct: 226 STHVIVPMFTPSGVIEAIERHRVVGALLVPTMIQMLVDSPEAADADLSSLIH-------- 277
Query: 57 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPG 113
I+ G + L++ P+ +L AYGMTE + T +T DP L
Sbjct: 278 -----IIYGASPIAESLLERTFALLPEVRLTQAYGMTELAPIATLLTADDHLDPALRR-- 330
Query: 114 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRY 168
G+PA H +L++ G VG I+ RG H+M Y
Sbjct: 331 --------------------SCGRPAVHSDLRIVGADGQELGRGEVGEIIVRGDHLMSGY 370
Query: 169 WDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 225
W+ KP + V W+ TGD G +D G V+L R I +GGENVY EVE +
Sbjct: 371 WN----KPDATADAVRDGWMHTGDAGHMDANGYVFLADRLKDMIITGGENVYSVEVENAI 426
Query: 226 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 285
+HPG+ V+G+ +A+ E V A V Q +E LR+ C
Sbjct: 427 AKHPGVAQTAVIGVPDAQWGERVHAVVVRAPGAQVTEDE----------------LREFC 470
Query: 286 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
RE ++ +K PR V + + P++ GKI + +R
Sbjct: 471 RE-HIANYKLPR-SVAFIEELPVSGAGKILKRNLR 503
>gi|357402331|ref|YP_004914256.1| Acyl-CoA synthetase member 2 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337768740|emb|CCB77453.1| Acyl-CoA synthetase family member 2, mitochondrial [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 544
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 147/325 (45%), Gaps = 54/325 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ + L AV T+L VP + +A+L + G D S++
Sbjct: 249 GACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSSLRTG 303
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK A++ YGMTETS T T D LE
Sbjct: 304 IMAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSPVST-QTRRDDDLER----------- 351
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 352 --------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTA 403
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I + V
Sbjct: 404 EVIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQV 463
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + R E V+ACV R+ D + E + HCR + L FK P
Sbjct: 464 VGVPDERYGEEVLACVIPRDP-------ADPPTL--------EEVTAHCRGR-LAHFKIP 507
Query: 297 RLFVLW-RKPFPLTSTGKIRRDEVR 320
RL LW FP+T +GK+R+ E+R
Sbjct: 508 RL--LWVLDSFPMTVSGKVRKVELR 530
>gi|452747632|ref|ZP_21947425.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
gi|452008376|gb|EME00616.1| AMP-binding domain protein [Pseudomonas stutzeri NF13]
Length = 560
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 31 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 90
T + VP + +A L ++ S++ + G P E+MK + ++ AY
Sbjct: 293 TGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLVEMQIAY 350
Query: 91 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 150
GMTETS T T D LE VT VG+ PH+E K+ +
Sbjct: 351 GMTETSPVST-QTSADDDLER---------RVT----------SVGRTQPHLESKIVDEH 390
Query: 151 SS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 205
+ +G + TRG VML YW+ A G W+ TGD+ +DD G + +VGR
Sbjct: 391 GAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGARWMHTGDLAVMDDEGYIKIVGRN 450
Query: 206 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
I GGENVYP E+E L HP + + V+G+ +++ E +VA V+L Q
Sbjct: 451 KDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHQ------ 504
Query: 266 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+E LR+ C+ + + FKAPR + + FP+T +GK+++ +R
Sbjct: 505 ----------AEAEELREFCKGR-IAHFKAPR-HIKFVDEFPMTISGKVQKFRMR 547
>gi|375266073|ref|YP_005023516.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
gi|369841394|gb|AEX22538.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
Length = 512
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 150/330 (45%), Gaps = 57/330 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ GA V +P+FE LE +E+H VT VP + + + + S++
Sbjct: 229 ASVLSGATLVLVPRFEPSHVLELIEKHKVTIFAGVPTMYIGM---LHADADYD-ISSLRV 284
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 285 AASGGSSLPTEVFRAFEEKF-NVPILEGYGLSETSPIACFNHLDQERI--PG-------- 333
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
VG+P VE+K+ + V G I+ RG +VM Y L +P
Sbjct: 334 ------------SVGQPIQGVEVKLVDLEGNQVPVGEEGEIIVRGHNVMKGY----LGRP 377
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 378 EVTESVLKNGWFHTGDVGRFDEAGNLYIVDRIKDLIIRGGFNVYPREIEEVFMTHPAVAM 437
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+GI + E + A V L+ DQ + +L Q ++L F
Sbjct: 438 VAVIGIPHQEYGEEIKAYVVLKP---------DQDLEAADL--------QAWGREHLAAF 480
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
K PR FV R P+++TGKI + E++ E+
Sbjct: 481 KYPR-FVEIRDQLPMSATGKILKRELKSEL 509
>gi|408678782|ref|YP_006878609.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
gi|328883111|emb|CCA56350.1| Long-chain-fatty-acid--CoA ligase [Streptomyces venezuelae ATCC
10712]
Length = 616
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 143/324 (44%), Gaps = 41/324 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A++ G V + K+++ ALE + +H VT VP L L R T G DS+
Sbjct: 319 YAVMAAGGTLVMMRKWDAGRALELIREHRVTHYAGVPTTALQLLDLARA--TGDGLDSLT 376
Query: 61 KILNGGGGLPSELMKEATNSF-PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ GG P ++ T + + + + YG+TETS +
Sbjct: 377 LLSTGGAAAPPGIVAGITAGYGERLEPRNGYGLTETSGGV-------------------L 417
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
NV P VG+P+P E+++ + G+ VG + RG ++ YW A +
Sbjct: 418 SNVGAEYRAHPG--SVGRPSPVTEVRIEAPGAEGVGELWLRGQSLVRGYWGNEEATRAAF 475
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
T + W TGD+ +D GG V +V R + GGENVY EVE VL QHP ++ V+G+
Sbjct: 476 TEDGWFRTGDLARVDAGGRVSIVDRLTDMVIRGGENVYCVEVEGVLQQHPDVVDAAVLGV 535
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ L E V A VRLR + E LR H + L FK P
Sbjct: 536 PHPLLGEEVAAVVRLRPG----------------AAVGVEELRAHVGAR-LAAFKVPAHV 578
Query: 300 VLWRKPFPLTSTGKIRRDEVRREV 323
++ + P TGKI + ++R +V
Sbjct: 579 LVREEELPRNPTGKILKRQLRDDV 602
>gi|220913513|ref|YP_002488822.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
gi|219860391|gb|ACL40733.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
Length = 558
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +ALEAV+ TSL VP + +A L +++ + G P E+M
Sbjct: 278 FSPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMN 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ YGMTETS T MT TL+ H+ + V
Sbjct: 336 HVIADMNMTDVAICYGMTETSPVST-MTRKGDTLQ-----------------HRTE--TV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E K+ S V G + TRG VM YW+Q E W+ TGD
Sbjct: 376 GRTMPHLESKIVDPVSGDVAERGEIGELCTRGYAVMDGYWNQPEKTAEAIDAEGWMHTGD 435
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G V + GR + GGEN+YP E+E L HP + + V+G+ + + E ++
Sbjct: 436 LARMDADGYVLVEGRIKDMVIRGGENIYPREIEEFLYTHPAVQDVQVIGVPDEKYGEELM 495
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ L+ + L + + CR K L +K PR +V R FP+T
Sbjct: 496 ACIILKPGAE---------------PLDAAAVADFCRGK-LAHYKVPR-YVEIRSSFPMT 538
Query: 310 STGKIRRDEVRREVMSHL 327
+GKIR+ E+R+E ++ L
Sbjct: 539 VSGKIRKVEMRQEAVARL 556
>gi|386358405|ref|YP_006056651.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808913|gb|AEW97129.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 570
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 149/336 (44%), Gaps = 54/336 (16%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 62
GAC V P F+ + L AV T+L VP + +A+L + G D S++
Sbjct: 275 GACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSSLRTG 329
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 330 IMAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSP-VSTQTRRDDDLER----------- 377
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 176
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 378 --------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTA 429
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I + V
Sbjct: 430 EVIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQV 489
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + R E V+ACV R+ + E + HCR + L FK P
Sbjct: 490 VGVPDERYGEEVLACVIPRDPADPP---------------TLEEVTAHCRGR-LAHFKIP 533
Query: 297 RLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
RL LW FP+T +GK+R+ E+R S P
Sbjct: 534 RL--LWVLDSFPMTVSGKVRKVELRERFAGPDHSGP 567
>gi|407007059|gb|EKE22823.1| hypothetical protein ACD_6C00713G0002 [uncultured bacterium]
Length = 562
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 45/311 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F L+A++Q T+ VP + +A L + S++ + G P E+M+
Sbjct: 280 FNPLETLKAIQQEKCTAAYGVPTMF--IAILEHEQFDEFDLSSLRTGIMAGSPCPQEIMQ 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ YGMTET+ P + + T +SV Q V
Sbjct: 338 RVIERMHMSEITICYGMTETA-------------------PVSAQSSTADSVEQRVST-V 377
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + +G + RG VML YW+ V W+ TGDI
Sbjct: 378 GRVHPHLEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEVIDAARWMHTGDI 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V + GR + GGEN++P+E+E L HP + + V+G+ + + E + A
Sbjct: 438 AEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIGVPDHKYGEELCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ L E+ +E E +RQ+C+E +++ K PR +V + + FP+T+
Sbjct: 498 CIILHENDPCTE----------------ETIRQYCKE-HISHNKVPR-YVRFFQEFPMTA 539
Query: 311 TGKIRRDEVRR 321
+GK ++ ++R
Sbjct: 540 SGKAQKFKLRE 550
>gi|384179904|ref|YP_005565666.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325988|gb|ADY21248.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 496
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 152/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE AL +E+H VT ++ VP I L + + T +V+
Sbjct: 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQAVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E ++ + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRLDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 AIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHGKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ V + FP +TGKI++ ++ ++ S
Sbjct: 468 KEIVFLEE-FPKNATGKIQKAQLANQLKS 495
>gi|431926248|ref|YP_007239282.1| acyl-CoA synthetase [Pseudomonas stutzeri RCH2]
gi|431824535|gb|AGA85652.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
stutzeri RCH2]
Length = 560
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 31 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 90
T + VP + +A L ++ S++ + G P E+MK + A++ AY
Sbjct: 293 TGMYGVPTMF--IAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMKRVIDDMHLAEMQIAY 350
Query: 91 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 150
GMTETS T T D LE VT VG+ PH+E K+ +
Sbjct: 351 GMTETSPVST-QTSADDDLER---------RVT----------SVGRTQPHLESKIVDEH 390
Query: 151 SS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 205
+ +G + TRG VML YW+ A G W+ TGD+ +DD G + +VGR
Sbjct: 391 GAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDGARWMHTGDLAVMDDEGYIKIVGRN 450
Query: 206 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 265
I GGENVYP E+E L HP + + V+G+ +++ E +VA V+L +
Sbjct: 451 KDMIIRGGENVYPREIEEFLFTHPAVADVQVIGVPDSKFGEEIVAWVKLHPGHE------ 504
Query: 266 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ E LR+ C+ + + FK PR + + FP+T +GK+++ +R
Sbjct: 505 ----------VEGEALREFCKGR-IAHFKTPR-HIKFVDDFPMTISGKVQKFRMR 547
>gi|404259662|ref|ZP_10962970.1| putative acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401831|dbj|GAC01380.1| putative acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 499
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 43/323 (13%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
V +P F+++ LE V + ++S VP ++A + + +++ I GG LP
Sbjct: 209 VHLPDFDAREWLELVARESISSATVVPTMLARIVDAL--DGDLAETPALRLISYGGARLP 266
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
+++ A +FP A +AYG+TETSS+L + P QA + P +
Sbjct: 267 LPVLERAMQAFPDAGFCNAYGLTETSSTLALLG--------PDDHAQAVASDDPLIRRRL 318
Query: 131 QGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+ VG+P P +E+++ G VG + RGA V Y L K SV + W
Sbjct: 319 E--SVGRPVPGMEIEIRDADGRPVGPGDVGSLFVRGAQVSGSY----LGKGSVLDAQGWF 372
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
T D +DD G +++ GR + I GGEN+ P E+E VLL HP + V+G+ +
Sbjct: 373 PTNDQAWVDDEGYLFIAGRADDTIIRGGENIGPAEIEDVLLTHPAVRETAVIGLPDEEWG 432
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
+ +VA + + + +S E +R H R + L G + P V+W
Sbjct: 433 QRLVAVI----------------VADPQAGISEEEVRSHVRAR-LRGSRTPDE-VIWVDE 474
Query: 306 FPLTSTGKIRRDEVRREVMSHLK 328
P T+TGK+ +RR++++ +
Sbjct: 475 LPQTATGKV----LRRQLVAQFE 493
>gi|383818352|ref|ZP_09973644.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
gi|383339072|gb|EID17424.1| AMP-dependent synthetase and ligase [Mycobacterium phlei
RIVM601174]
Length = 497
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 43/334 (12%)
Query: 1 MAMLMVGACHVFIPKFESKS--ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
++ L G V++ +F++ + L AVE+ VT+ VP ++ + ++ + T G +
Sbjct: 197 LSNLYAGRRMVYLREFDADAWVRLAAVER--VTTATVVPTMLDRIVGVLEDRPT--GLPA 252
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + GG +P L++ A P ++AYG+TETSS++ +T P A
Sbjct: 253 LRNLAYGGAKVPLPLVRRALRLLPDVGFVNAYGLTETSSTVAVLT--------PEDHRTA 304
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 173
P +V + G VG+ P VEL++ G G + RGA V RY
Sbjct: 305 LAATDP-AVARRLG-SVGRAVPGVELQIRGQDGRVLGPGETGELYVRGAQVSGRY----T 358
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
SV + W T D+ S+D+GG +++ GR + I GGEN+ P E+E VL++HPG+
Sbjct: 359 GLGSVLDDDGWFPTRDVASMDEGGYLYIAGRSDDTIIRGGENIAPAEIEDVLVEHPGVRE 418
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + + +VA V Q + + E LR R + L G
Sbjct: 419 VAVVGVDDDQWGQAIVAVV------------VPQPGTSPQ----PEELRNFVR-RTLRGS 461
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ P V +R P+T TGK+ R E+R +V L
Sbjct: 462 RTPDRIV-FRDALPVTPTGKVLRREIRLDVAGEL 494
>gi|345010053|ref|YP_004812407.1| AMP-dependent synthetase/ligase [Streptomyces violaceusniger Tu
4113]
gi|344036402|gb|AEM82127.1| AMP-dependent synthetase and ligase [Streptomyces violaceusniger Tu
4113]
Length = 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 147/335 (43%), Gaps = 52/335 (15%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP F+ + L AVE+ TSL VP + +A L S++ +
Sbjct: 259 GAC-VVIPAGTFDPVATLAAVERERCTSLYGVPTMF--IAELALPDFATFDLSSLRTGIM 315
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+M+ A++ YGMTETS P
Sbjct: 316 AGSPCPVEVMRRVVAEMHMAEVSICYGMTETSP--------------------VSAQTRP 355
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
+ + VG+ PH+E+K+ + G + TRG VML YW +
Sbjct: 356 DDDLVRRTSTVGRVLPHIEVKIVDPVTGATVPRGTRGELCTRGYSVMLGYWQEPERTAEA 415
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ +D G V +VGR I GGENVYP E+E L HP + + VVG
Sbjct: 416 IDSARWMHTGDLAVMDGEGYVQIVGRIKDMIVRGGENVYPREIEEFLHTHPKVADVQVVG 475
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V+ACV LRE + L+ + L + CR + L +K PR
Sbjct: 476 VPDEKYGEEVLACVILREGAK---------------TLTRDELARFCRGR-LAHYKVPRY 519
Query: 299 FVLWRKPFPLTSTGKIRRDEVR----REVMSHLKS 329
L FP+T +GK+R+ E+R RE++ +S
Sbjct: 520 LRLM-DGFPMTVSGKVRKVELREAAARELLPETRS 553
>gi|405976077|gb|EKC40598.1| Acyl-CoA synthetase family member 2, mitochondrial [Crassostrea
gigas]
Length = 606
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 49/313 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 73
F++ L+A Q TS+ VP + D+ + D S+ + G P E
Sbjct: 322 FDAGKTLKAAAQERCTSMYGVPTMFIDMLN----HHDFDSFDLSSLYTGVMAGSPCPIET 377
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
+K+ + ++ YG+TETS P Q+F P + +
Sbjct: 378 LKQVISRMNMDRVTVCYGLTETS----------PVTH------QSF----PTDPAEKRVA 417
Query: 134 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VGKP HVE KV ++ G + TRG + ML YWD+ + + W TG
Sbjct: 418 TVGKPHSHVECKVIAENGEICPIGTPGELCTRGYNTMLYYWDEPTKTKEAISLDRWYHTG 477
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
DI +D+ G +VGR I GGENVYP E+E ++ +HP + + VVG+ + RL E +
Sbjct: 478 DIAQMDEDGFCKIVGRIKDMIIRGGENVYPTEIEQLIYKHPKVKDVQVVGVPDERLGEEI 537
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
A ++++E+ SE ++ +C+EK L +K P+ ++ FPL
Sbjct: 538 CAWIQVKENQSISEDE----------------IKSYCKEK-LARYKVPK-YISIVTEFPL 579
Query: 309 TSTGKIRRDEVRR 321
T TGK+++ +++
Sbjct: 580 TVTGKVQKYKIQE 592
>gi|317129858|ref|YP_004096140.1| AMP-dependent synthetase and ligase [Bacillus cellulosilyticus DSM
2522]
gi|315474806|gb|ADU31409.1| AMP-dependent synthetase and ligase [Bacillus cellulosilyticus DSM
2522]
Length = 572
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 149/329 (45%), Gaps = 50/329 (15%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+G + +PKFE K L+A+E+H T P + L + K S+K ++G
Sbjct: 277 MGFKMIIMPKFEPKDILKAIEKHKATLYPGAPTMYIGLLNHPDITK--HDLSSIKACISG 334
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
LP E+ + + K +L+ YG+TETS P A N+ +
Sbjct: 335 SAPLPLEV-QTSFEEKTKGRLVEGYGLTETS-------------------PVAAANLIWS 374
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
S + +G P P ++ V S ++ +G I+ +G VM YW++ +
Sbjct: 375 S---RKNGSIGIPWPDTDMAVLSVENADIAEPNEIGEIMIKGPQVMKGYWNRPEDTQATF 431
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
GE WL TGD+G +D+ G ++V R+ I +GG N+YP E+E VL +H I +G+
Sbjct: 432 KGE-WLLTGDMGYMDEDGFFYIVDRKKDMIIAGGFNIYPREIEEVLYEHEDIQEACAIGV 490
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ E V A + L+E Q SE L ++CR K L +K PR+F
Sbjct: 491 PDPYRGETVKAFIVLKEGRQVSEVE----------------LEEYCR-KQLAAYKIPRIF 533
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+R P T GKI R + E S LK
Sbjct: 534 E-FRDELPKTMVGKILRRVLVEEEKSKLK 561
>gi|386001613|ref|YP_005919912.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
gi|357209669|gb|AET64289.1| AMP-dependent acyl-CoA synthetase and ligase [Methanosaeta
harundinacea 6Ac]
Length = 569
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA + GA V + F+ S L AVE+ T+L VP + +A L S+
Sbjct: 265 MACMTHGAAMVLPAEYFDPASTLAAVERERCTALHGVPTMF--VAELEHPDFDKYDLSSL 322
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P+E MK+ ++ +++ YG TE S +T +
Sbjct: 323 RTGIMAGSPCPTEYMKKVSSLMNMREVVITYGQTEASPGITMSS---------------- 366
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
T +S+ + + VGKP PH E+K+ + + G I RG +M Y++
Sbjct: 367 ---TSDSLDR-RVSTVGKPMPHTEVKITDPKTGKIMHRGETGEICARGYAIMRCYYNNPG 422
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A E WL TGD+G +DD + GR + GGEN+YP E+E L HP I
Sbjct: 423 ATEKAIDKEGWLHTGDLGILDDEDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPDISD 482
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ +AR E ++A ++L+E L++E + CR + + F
Sbjct: 483 VQVIGVPDARYGEELMAWIKLKEGRT----------------LTAEEVLAFCRGR-IAHF 525
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ ++R E + L
Sbjct: 526 KIPR-YIKFVDGFPMTVTGKIQKYKMREESIKEL 558
>gi|430807645|ref|ZP_19434760.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429500076|gb|EKZ98462.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 518
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 145/334 (43%), Gaps = 59/334 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + ++G H +P F+ LE +E+ V ++ VP ++ A L + S+K
Sbjct: 218 VGVFVIGGTHTMVPTFDPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I G + ++ A + P + AYG+TE S ++
Sbjct: 276 RINYGASPINGAVLDAALAAMPNVEFSHAYGLTEASPVVS-------------------- 315
Query: 121 NVTPNSVHQPQGVC------VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 169
V P + H P+G G+P V +KV V G I+ RG ++M YW
Sbjct: 316 -VNPPANHGPEGRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIVVRGPNIMQGYW 374
Query: 170 DQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 226
+ KP + + WL TGD +DD G +++V R I +GGENVY EVE L
Sbjct: 375 N----KPEETRQALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALA 430
Query: 227 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 286
QHP + V+G+ + R E V A V LR Q E LR HCR
Sbjct: 431 QHPAVHSCAVIGVPHERWGEAVHAVVVLRPGLQAGEDE----------------LRTHCR 474
Query: 287 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ +K P+ V +R PL++ GKI + E+R
Sbjct: 475 AL-IASYKCPK-SVEFRTEMPLSAAGKILKRELR 506
>gi|359148032|ref|ZP_09181274.1| AMP-binding domain protein [Streptomyces sp. S4]
Length = 541
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 144/325 (44%), Gaps = 54/325 (16%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKI 62
GAC V P F+ + L AV Q TSL VP + +LA T S++
Sbjct: 255 GACIVIPGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLRTG 309
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK A++ YGMTETS P +
Sbjct: 310 IMAGSPCPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQTR 350
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
+S+ G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 351 RDDSLAHRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTA 409
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I + V
Sbjct: 410 EAVDPAGWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQV 469
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + + E V+ACV K L+ E LR CR++ L +K P
Sbjct: 470 VGVPDGKYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYKVP 513
Query: 297 -RLFVLWRKPFPLTSTGKIRRDEVR 320
RL +L FP+T +GK+R+ E+R
Sbjct: 514 SRLQLL--DAFPMTVSGKVRKIELR 536
>gi|123914455|sp|Q0P4F7.1|ACSF2_DANRE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|112418669|gb|AAI22099.1| Acyl-CoA synthetase family member 2 [Danio rerio]
Length = 606
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
++ ++ L A+E+ T + P + D+ + K SV+ + G P E+M+
Sbjct: 327 YDGRANLRAIEKEKCTFVYGTPTMYIDMLGQPDLAKF--DLSSVRGGIAAGSPCPPEVMR 384
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N +++ YG TE S P F +S + + V V
Sbjct: 385 KILNVMGIKEMVIGYGTTENS-------------------PVTFCGFPVDSAER-KIVTV 424
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G +PH E KV + + G ++ RG VML YW T + W TGD
Sbjct: 425 GCISPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGD 484
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
I S+D + GR I GGEN+YP E+E L HP I+ VVG+ + R+ E V
Sbjct: 485 IASLDQFAYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVC 544
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+RL+E + + E ++ +C+ K + +K PR ++L+ + +PLT
Sbjct: 545 ACIRLKEGQE----------------CTVEEIKAYCKGK-IAHYKVPR-YILFVQDYPLT 586
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ ++R L
Sbjct: 587 ITGKIQKHKLRERTEKQL 604
>gi|418532534|ref|ZP_13098437.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
gi|371450393|gb|EHN63442.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
Length = 518
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 45/332 (13%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ G CHV +P+F+ + L+A+ VT + VP ++ L V K S+++
Sbjct: 219 ALFAAGGCHVMVPRFDPIAVLQAIASTGVTDTLLVPTMIQMLVDHPDVHK--YDLSSLRQ 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE-TPGQL---PQ 117
+ G + L+ A + P + AYGMTE S T ++ P + PG+ +
Sbjct: 277 MAYGASPISEGLLDRAMRTIPDVGFVQAYGMTEVSPIATILS---PEMHREPGRARGRHR 333
Query: 118 AFGNVTPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
+ G T + + P+G + P E VG I+ RG VML YW++ A
Sbjct: 334 SAGRATACTEVRIVDPEG----REVPRGE----------VGEIVVRGPGVMLGYWNK-PA 378
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP +
Sbjct: 379 ETEAAIRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASC 438
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI + E V + L+ QS + +EL+ C+E+ + G+K
Sbjct: 439 AVIGIPHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYK 481
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR V + + PL+ GKI + +R +H
Sbjct: 482 CPR-DVSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|328718816|ref|XP_001945665.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 595
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 149/333 (44%), Gaps = 44/333 (13%)
Query: 5 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 62
M+ V +P FE K+A++ + + T L P + D+ ++ + +K
Sbjct: 299 MITKSTVVLPSAHFEPKAAVDVLTKEKCTILFGTPTVFVDIMSVFENLSPTLQDNDLKFG 358
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
L+GG LM + N FP+AK++S +GMTETS P +F +
Sbjct: 359 LSGGATCSPILMTKFNNMFPRAKILSLFGMTETS-------------------PCSFQSF 399
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 177
T +S + + +G HVE KV + V G +L RG VM Y++
Sbjct: 400 TDDSDERVKST-MGFIQDHVEAKVVDTNGNMVPFGTPGELLIRGYLVMNGYFNDEEKTKE 458
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
WL TGD + + G VGR I GGEN++P+E+E L HP I + V
Sbjct: 459 TIDSNGWLHTGDQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVY 518
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + R+ E V A V ++E +E++ SK K ++ FK P+
Sbjct: 519 GIPDDRMGEEVCASVIVKEGAAVTEADIKAYSKGK-----------------ISHFKIPK 561
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
+ + FP+T+TGK++++ + M + SL
Sbjct: 562 YIFIEKDGFPMTATGKVQKNRLSEIAMQRISSL 594
>gi|291454988|ref|ZP_06594378.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|421742720|ref|ZP_16180829.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
gi|291357937|gb|EFE84839.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|406688858|gb|EKC92770.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
Length = 541
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 144/325 (44%), Gaps = 54/325 (16%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKI 62
GAC V P F+ + L AV Q TSL VP + +LA T S++
Sbjct: 255 GACIVIPGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLRTG 309
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ G P E+MK A++ YGMTETS P +
Sbjct: 310 IMAGSPCPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQTR 350
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKP 176
+S+ G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 351 RDDSLAHRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTA 409
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I + V
Sbjct: 410 EAVDPAGWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQV 469
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + + E V+ACV K L+ E LR CR++ L +K P
Sbjct: 470 VGVPDGKYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYKVP 513
Query: 297 -RLFVLWRKPFPLTSTGKIRRDEVR 320
RL +L FP+T +GK+R+ E+R
Sbjct: 514 SRLQLL--DAFPMTVSGKVRKIELR 536
>gi|384107460|ref|ZP_10008360.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383832407|gb|EID71881.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 521
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 146/329 (44%), Gaps = 61/329 (18%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 62
++G VF+P F + L A+++H VT VPA++ + + D S++ I
Sbjct: 223 LLGGTLVFLPTFTPEGVLSAIDEHRVTGCALVPAMIQRICE----HPDFGTYDVSSLEFI 278
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
G G P L+ A FP I YGMTET G L V
Sbjct: 279 GYGASGTPQSLLDRALEHFPSVNFIHVYGMTET-----------------GVL-----TV 316
Query: 123 TPNSVHQPQGV---CVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 174
+ H+ G G+ P VE+ V + DG VG ++TRG HVM YW
Sbjct: 317 LGGAEHRAGGARLRSTGRATPIVEIAVIAPDGHPLPPGQVGEVVTRGDHVMAGYW----G 372
Query: 175 KP---SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
KP + + + W+ TGD G +DD G +++V R I +GGENVY EVE L HP +
Sbjct: 373 KPEDTATALRDGWMHTGDGGYLDDAGYLYIVDRLKDMIITGGENVYSAEVENALAAHPAV 432
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
V+G+ + E V A V R +++E LR H + +
Sbjct: 433 ASCAVIGVPDPDWGERVHAVVVPRPGHS----------------VTAEELRAHAKTL-IA 475
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+KAPR V + P++ TGKI + E+R
Sbjct: 476 GYKAPRT-VDFVGALPVSGTGKILKRELR 503
>gi|398844830|ref|ZP_10601884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398254189|gb|EJN39292.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 557
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 144/310 (46%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDALATLRAVAEEKATALYGVPTMF--IAELDHPQRRDFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS ++ T + LE VT V
Sbjct: 336 RVIDEMHMAEVQIAYGMTETSP-VSLQTGANDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV DG++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLENKVVDGDGNTVPCGEIGELCTRGYSVMLGYWNNPKATAQSIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ +R E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSRYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHVASEDE----------------LREWARAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVR 320
TGK+++ +R
Sbjct: 538 TGKVQKFRMR 547
>gi|333368094|ref|ZP_08460313.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
gi|332977877|gb|EGK14627.1| long-chain-fatty-acid-CoA ligase [Psychrobacter sp. 1501(2011)]
Length = 579
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 152/327 (46%), Gaps = 50/327 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ ML +G V+ FE + L+A+ T L VP++ LA L + + S+
Sbjct: 283 LTMLSIGGTVVYPSTSFEPLTVLQAISDERCTLLHGVPSMF--LAMLNHPEFSTFDLSSL 340
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ L+GG PSELM+ N +L AYGMTETS T
Sbjct: 341 RGGLSGGASCPSELMQRVINDMHMKELSIAYGMTETSPKST------------------- 381
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYW-DQF 172
P + + + VG PH+E+K+ + VG +LT+G VM YW D+
Sbjct: 382 -QTLPTTEFKKRISTVGVVQPHLEVKIVDTETGETLPIGEVGEVLTKGYAVMQGYWNDKV 440
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+V G W+ TGD+GS+++ G + +VGR I GGEN+YP EVE L +HP I
Sbjct: 441 KTDEAVVDG--WMHTGDLGSMNEQGYISIVGRSKDMIIRGGENIYPIEVENFLYRHPKIS 498
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ +VG+ + + E++ A + R +E +R C + +
Sbjct: 499 DVQIVGVPDKQYGEVLAAWIIPRAGETITEQE----------------IRDFCYNQ-IAH 541
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEV 319
FK P ++ + + +P+T TGKI++ ++
Sbjct: 542 FKIPT-YIRFVEQYPMTVTGKIQKFKI 567
>gi|443476927|ref|ZP_21066807.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
gi|443018020|gb|ELS32344.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
Length = 534
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 45/327 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G +PKF+ + LEA+ VT + VP ++ L W+ ++ IL
Sbjct: 243 IYGTKLTLLPKFDEREVLEAIASERVTLISLVPTMLTRLLE----HSLWQNLQQLRGILL 298
Query: 65 GGGGLPSELMKEATN-SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG EL+ + P ++ YGMTET+S +T + + L+ GN
Sbjct: 299 GGAPASPELIAHGQQLNLP---IMPTYGMTETASQITTLRTEEIALKQGSSGLPLLGNSL 355
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW-----DQFLAKPSV 178
V EL S +G+IL +GA VM Y D+ + S
Sbjct: 356 R---------IVDLDDAQRELP-----SGEIGQILVQGASVMSGYLHTDHTDRTDRQQSQ 401
Query: 179 STG--EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
G + WL TGD+G +D G +++V RR+ I SGGEN+YP E+E +LL HP I V
Sbjct: 402 FQGIADGWLHTGDMGYLDRDGYLYVVSRRSDLIISGGENIYPTEIETILLSHPAIAEACV 461
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VGI + E V A + + N +L L+ +R C +K+L +K P
Sbjct: 462 VGILDREWGEFVAAILV-------------TNHNNNQLTLTE--IRDFCEQKSLARYKLP 506
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ +W K P T++GK+ R ++R ++
Sbjct: 507 KEIYVW-KSLPKTASGKLLRQQIRNQI 532
>gi|359777990|ref|ZP_09281264.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
gi|359304844|dbj|GAB15093.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
Length = 557
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 143/317 (45%), Gaps = 44/317 (13%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +ALEAV+ T+L VP + +A L +++ + G P E+M
Sbjct: 278 FTPAAALEAVQDFGGTALYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMN 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT TL+ H+ + V
Sbjct: 336 RVISEMNMKDVAICYGMTETSPVST-MTRGGDTLQ-----------------HRTE--TV 375
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ V G + TRG VM YW+Q + W+ TGD+
Sbjct: 376 GRTMPRLESKIVDLAGEVVERGVIGELCTRGYAVMQGYWNQPDKTAEAIDADGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V + GR + GGEN+YP E+E L HP I + V+G+ +AR E ++A
Sbjct: 436 ARMDDDGYVVIEGRMKDMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDARYGEELMA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ L+ + L + + + CR K L +K PR +V R FP+T
Sbjct: 496 CIILKPGAE---------------PLDAAAVAEFCRGK-LAHYKVPR-YVDVRDSFPMTV 538
Query: 311 TGKIRRDEVRREVMSHL 327
+GK+R+ E+R E ++ L
Sbjct: 539 SGKVRKVEMREEAVARL 555
>gi|456388153|gb|EMF53643.1| long-chain-fatty-acid-CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 530
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 146/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F++++ LEAV++ TSL VP + +A L S++ +
Sbjct: 243 GACVVIPAPSFDARATLEAVQRERCTSLYGVPTMF--IAELNLPDFGAYDLSSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS T T D LE
Sbjct: 301 GSPCPVEVMKRVVTEMHMREVSICYGMTETSPVST-QTRRDDDLEH-------------- 345
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 346 -----RTATVGRVLPHIEVKVVDPVTGVTRPRGTAGELCTRGYSVMLGYWEEPEKTAEAV 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 401 DPGRWMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-L 298
+ R E V+ACV E + L+ E LR +C + L +K P L
Sbjct: 461 PHERYGEEVLACVIPHEGAE---------------PLTLEELRAYC-DGQLAHYKIPSAL 504
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
VL FP+T +GK+R+ E+R
Sbjct: 505 RVL--DSFPMTVSGKVRKIELR 524
>gi|386714460|ref|YP_006180783.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
gi|384074016|emb|CCG45509.1| long-chain-fatty-acid--CoA ligase [Halobacillus halophilus DSM
2266]
Length = 546
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 159/338 (47%), Gaps = 50/338 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK-KTWKGRDSV 59
+A + GA V + +FE L+AV++ T+L VP + +A L + + WK ++
Sbjct: 250 LAAVSKGATMVILEQFEPLQVLKAVKEEACTALHGVPTMF--IAELNHSEFENWKPT-TL 306
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK ++ AYG TE+S +T DP
Sbjct: 307 RTGIMAGSTCPMEVMKSVIEDMGAQEITIAYGQTESSPVITQTKADDPI----------- 355
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-----DGSSHV-GRILTRGAHVMLRYWDQFL 173
+ + VGK P+VE+K+ + + + G + TRG VM Y+
Sbjct: 356 ---------ELRVSSVGKAHPNVEVKIIDPAIGDEAEAGIPGELCTRGYLVMEGYYKNQE 406
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A + E WL TGDI +D+ G + + GR I GGENVYP E+E L QHP ++
Sbjct: 407 ATETAIDPEGWLHTGDIAVMDEDGYIEITGRMKDMIIRGGENVYPREIEEFLYQHPDVLD 466
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + E ++A + +E E++ +R C E ++
Sbjct: 467 VQVVGVPDQKYGEEIMAWIIPKEGKSIEEND----------------IRDFC-EGQISKH 509
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREV--MSHLKS 329
K PR ++++ +P+T++GKI++ ++R + M LKS
Sbjct: 510 KIPR-YIMFTDEYPMTASGKIQKFKLREDALDMMDLKS 546
>gi|300783387|ref|YP_003763678.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384146618|ref|YP_005529434.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399535272|ref|YP_006547934.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299792901|gb|ADJ43276.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340524772|gb|AEK39977.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398316042|gb|AFO74989.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 548
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 44/313 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++ LEAV++ TSL VP ++ +A L K S++ + G P E+MK
Sbjct: 258 FDPEATLEAVQRERCTSLYGVPTMLF-IAELNHPKFAAYDLSSLRTGIMAGSPCPVEVMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++ YGMTETS T T D +L+ + V
Sbjct: 317 QVVSRMGMEQVTICYGMTETSPVST-QTRMDDSLDL-------------------RVSTV 356
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + G + TRG VML YW+ W+ TGD
Sbjct: 357 GRVHPHLEIKLVDPATGLTVPRGEAGELCTRGYSVMLGYWNDPGKTAEAIDAARWMHTGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E +
Sbjct: 417 LAVMDADGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDVKYGEELC 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR D +++ +++E LR K L +K PR +VL FP+T
Sbjct: 477 AWVKLR----------DHAAE-----VTAETLRAFATGK-LAHYKIPR-YVLVVDEFPMT 519
Query: 310 STGKIRRDEVRRE 322
TGK+R+ E+R +
Sbjct: 520 VTGKVRKIEMREK 532
>gi|397680629|ref|YP_006522164.1| acyl-CoA synthetase YngI [Mycobacterium massiliense str. GO 06]
gi|414582915|ref|ZP_11440055.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|418251261|ref|ZP_12877458.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|420880763|ref|ZP_15344130.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|420886457|ref|ZP_15349817.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|420891999|ref|ZP_15355346.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|420895610|ref|ZP_15358949.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|420900054|ref|ZP_15363385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|420905599|ref|ZP_15368917.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|420933639|ref|ZP_15396913.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|420937662|ref|ZP_15400931.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|420943901|ref|ZP_15407156.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|420947586|ref|ZP_15410836.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|420954009|ref|ZP_15417251.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|420958183|ref|ZP_15421417.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|420963887|ref|ZP_15427111.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|420973839|ref|ZP_15437030.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|420994126|ref|ZP_15457272.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|420999902|ref|ZP_15463037.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|421004424|ref|ZP_15467546.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|353449086|gb|EHB97485.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|392079259|gb|EIU05086.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|392082220|gb|EIU08046.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|392085672|gb|EIU11497.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|392094922|gb|EIU20717.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|392097415|gb|EIU23209.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|392103503|gb|EIU29289.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|392118067|gb|EIU43835.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|392133502|gb|EIU59245.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|392143177|gb|EIU68902.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|392145507|gb|EIU71231.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|392152922|gb|EIU78629.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|392154616|gb|EIU80322.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|392161722|gb|EIU87412.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|392178684|gb|EIV04337.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|392180228|gb|EIV05880.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|392193127|gb|EIV18751.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|392246800|gb|EIV72277.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|392247909|gb|EIV73385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|395458894|gb|AFN64557.1| Putative acyl-CoA synthetase YngI [Mycobacterium massiliense str.
GO 06]
Length = 546
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E+ + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMREDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPG---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|334346140|ref|YP_004554692.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102762|gb|AEG50186.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 561
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 143/317 (45%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ + L AVE L VP + +A L + +++ + G P E+M+
Sbjct: 278 FDAGAVLSAVENERCGFLYGVPTMF--IAALSHPEFARFDLSTLRGGIMAGSPCPVEIMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
E A + AYGMTETS ++F + T+E VT V
Sbjct: 336 ETIERMHMAGITIAYGMTETSP-VSFQSDMGDTIER---------RVT----------TV 375
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + V G + TRG VM+ YW + E W+ +GD+
Sbjct: 376 GRIQPHLESKIIDEAGEIVPRGQPGELCTRGYSVMIGYWGDPEQTAAAIDSEGWMHSGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G +VGR I GGENVYP E+E L HP + + V+G+ + R E V A
Sbjct: 436 AVLDDEGYCKIVGRSKDMIIRGGENVYPREIEEFLHTHPAVQDVQVIGVPDDRYGEEVCA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+R E SE E LR CR + + +K PR ++ + + FP+T
Sbjct: 496 WIRCHEGAALSE----------------EELRIFCRGR-IAHYKVPR-YIRFVRDFPMTV 537
Query: 311 TGKIRRDEVRREVMSHL 327
TGKI++ +R ++ L
Sbjct: 538 TGKIQKFAMRDAMVEEL 554
>gi|399910718|ref|ZP_10779032.1| AMP-binding domain protein [Halomonas sp. KM-1]
Length = 567
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++ L+AV T+L VP + +A L +++ + G P E+M+
Sbjct: 287 FDPEATLKAVSDEKATALYGVPTMF--IAELEHPNFAQYDLSTLRTGIMAGSICPIEVMR 344
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + + YGMTETS T T D LE + V
Sbjct: 345 KVIDKMHMEDVTICYGMTETSPVST-QTKTDAPLEK-------------------RVTTV 384
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G PH+E+K+ S + V G + TRG VML YW+ A W+ TGD
Sbjct: 385 GTIHPHLEVKLVSPETGAVVPRGETGELCTRGYSVMLGYWNNEEATAKSIDSAGWMHTGD 444
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR I GGEN+YP E+E L HP I + V+G+ + + E V+
Sbjct: 445 LATMDEEGYIAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQVIGVPDEKYGEEVM 504
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+L E + L+++ L++ C+ K + +K PR +V + FP+T
Sbjct: 505 AWVKLGEGQK----------------LNADELKEFCKGK-IAHYKIPR-YVKFVDEFPMT 546
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ ++R E L
Sbjct: 547 VTGKIQKFKMREEATHEL 564
>gi|432331437|ref|YP_007249580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
gi|432138146|gb|AGB03073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
Length = 566
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 149/316 (47%), Gaps = 48/316 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+++ L+ VE+ T+L VP + +A+LA K + S++ + G P E
Sbjct: 276 PTFDAEEVLKTVEKEHCTALHGVPTMFIAELAHPNFAKYDLR---SLRTGIMAGSPCPIE 332
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+MKE ++++ YG TET+ +T T DP +
Sbjct: 333 VMKEVNTRMNMSEIVIVYGQTETAPGVTMTTTKDPL--------------------DRRV 372
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH ELK+ + + G I RG VM Y++ A + + W
Sbjct: 373 TTVGRAFPHTELKIIDPNTGKIVPTGAIGEICARGYCVMKCYYNNPAATHATLDKDRWNH 432
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+G++DD G +VGR + GGEN+YP E+E L H I + + G+ + + E
Sbjct: 433 TGDLGTMDDEGYFKIVGRLKDMVIRGGENIYPREIEEFLHHHEKISDVYITGVPDVKYGE 492
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
+ A V+L+ + ++ + ++ +C+ K + +K PR +VL+ + F
Sbjct: 493 ELCAWVKLKPG----------------VTMTEQEVKDYCKGK-IARYKIPR-YVLFVQEF 534
Query: 307 PLTSTGKIRRDEVRRE 322
P+T +GKI++ ++R E
Sbjct: 535 PITISGKIQKFKMREE 550
>gi|441518909|ref|ZP_21000618.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454220|dbj|GAC58579.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 522
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 151/331 (45%), Gaps = 49/331 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A+ VG HV I F+ + LE VE+ VT + VP ++ L + + RD +
Sbjct: 220 VALTWVGGTHVIIGGFDRELWLETVEREGVTRAMLVPTMLTML-----LSEPLGDRDLST 274
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ +L G +P+ L++ A + YGMTE + +TF+T D P+A
Sbjct: 275 LQSVLYGASPMPTALLRTAIQTL-GCDFCQVYGMTEAAPIVTFLTHEDHRDGIAATSPEA 333
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 173
Q + G+P V++ + S VG I RG +VM Y L
Sbjct: 334 ----------QARLRSAGRPIVGVDVVIRDPQGSPLPTGDVGEITVRGMNVMQGY----L 379
Query: 174 AKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP T +V W TGD+G +D G +++V R I +GGENVY EVE L +HP
Sbjct: 380 NKPD-ETADVLIDGWFHTGDMGYLDGSGYLYVVDRLKDMIITGGENVYSTEVENALYRHP 438
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+I + V G + R E V A V LR EL+ E LR HCR+
Sbjct: 439 DVIEVAVFGTPDPRWGEAVTAAVVLRR-------------DGDELV---EELRDHCRDL- 481
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ G+K PR+ + + P + GKI + +R
Sbjct: 482 IAGYKVPRVIHIVDEALPKSGAGKILKRNLR 512
>gi|324506941|gb|ADY42950.1| Acyl-CoA synthetase family member 2 [Ascaris suum]
Length = 634
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 46/326 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + + C P FE +AL+A+ + T++ P + D+ R + S+
Sbjct: 289 ACIHLQTCVFPAPSFEPLAALQAIHEERCTTVYGTPTMFIDMLNHPRYSEF--DYSSIFS 346
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G P L + L YG TETS +++M++ D + P + ++ G+
Sbjct: 347 GFVAGAPCPIALCRRLVQELGMRDLQVCYGTTETSP-VSYMSVRD---DPPEERIKSVGH 402
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKP 176
+ H+E + +DG+ G +L RG VM YWD
Sbjct: 403 IMD----------------HLESAIVGNDGTVLPRGERGEVLVRGYSVMRCYWDSEDMTK 446
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ T + W TGDIG + + G V +VGR+ I GGEN+YP EVE L +HP I + +
Sbjct: 447 TEITPDRWYHTGDIGVMHENGTVSIVGRKKDMIVRGGENIYPTEVEQYLFRHPMIEDVQI 506
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + R E+V A +RL E +KN ++ + +R C+ + + FK P
Sbjct: 507 VGVPDERYGEVVCAWIRLNE-----------EAKN----ITEQDIRDFCKGR-IAHFKIP 550
Query: 297 RLFVLWR--KPFPLTSTGKIRRDEVR 320
R ++L++ K FPLT +GK+++ E+R
Sbjct: 551 R-YILFKGEKDFPLTVSGKVKKYEMR 575
>gi|262376316|ref|ZP_06069546.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262308917|gb|EEY90050.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 562
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 45/311 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F L+A++Q T+ VP + +A L + S++ + G P E+M+
Sbjct: 280 FNPLETLKAIQQERCTAAYGVPTMF--IAVLEHEQFDEFDLSSLRTGIMAGSPCPQEIMQ 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ YGMTET+ P + + T +SV Q V
Sbjct: 338 RVIERMHMSEITICYGMTETA-------------------PVSAQSSTADSVEQRVST-V 377
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + +G + RG VML YW+ V W+ TGDI
Sbjct: 378 GRVHPHLEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEVIDAARWMHTGDI 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V + GR + GGEN++P+E+E L HP + + V+G+ + + E + A
Sbjct: 438 AEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIGVPDHKYGEELCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ L E+ +E E +RQ+C+E +++ K PR +V + + FP+T+
Sbjct: 498 CIILHENDPCTE----------------ETIRQYCKE-HISHNKVPR-YVRFFQEFPMTA 539
Query: 311 TGKIRRDEVRR 321
+GK ++ ++R
Sbjct: 540 SGKAQKFKLRE 550
>gi|221213085|ref|ZP_03586061.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221167298|gb|EED99768.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 564
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 149/318 (46%), Gaps = 49/318 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ S L AV+ T+L VP + +A L + +S++ G P E+MK
Sbjct: 279 FDPVSVLTAVQDERCTALYGVPTMF--IAMLSHPRFAEFDLNSLRTGCMAGSPCPIEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T++TP L + G V
Sbjct: 337 RVVDDMHMKEVTIAYGMTETSPVSC-----QSTVDTP--LERRVGTV------------- 376
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTG 188
G+ PH+E+K+ + G + TRG VM YW D+ + ++ E W+ TG
Sbjct: 377 GQVHPHLEIKLVDPDTGRTVDIGETGELCTRGYSVMNGYWNDEKRTREAIDEDE-WMHTG 435
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ ++D G V +VGR + GGENVYP E+E L HP I + VVG+ + + E +
Sbjct: 436 DLATMDAKGYVNIVGRIKDMVIRGGENVYPREIEEFLYGHPAIRDVQVVGVPDPKYGEEL 495
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
A V LR + L+ E LR HC+ + + +K PR +V + FP+
Sbjct: 496 CAWVVLR----------------PDHTLTEEELRAHCKGQ-IAHYKVPR-YVRFVDEFPM 537
Query: 309 TSTGKIRRDEVRREVMSH 326
T TGKI++ + RE+M H
Sbjct: 538 TITGKIQKYRI-REIMQH 554
>gi|264677845|ref|YP_003277751.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208357|gb|ACY32455.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 518
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 156/332 (46%), Gaps = 45/332 (13%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ G CHV +P+F+ + L+A+ VT + VP ++ L + K S+++
Sbjct: 219 ALFAAGGCHVMVPRFDPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQ 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE-TPGQLP---Q 117
+ G + L+ A + P + AYGMTE S T ++ P + PG+ +
Sbjct: 277 MAYGASPISEGLLDRAMRTIPDVDFVQAYGMTEVSPIATILS---PEMHREPGRAKGRHR 333
Query: 118 AFGNVTPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
+ G T + + P+G + P E VG I+ RG VML YW++ A
Sbjct: 334 SAGRATACTEVRIVDPEG----REVPRGE----------VGEIVVRGPGVMLGYWNK-PA 378
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP +
Sbjct: 379 ETEAAIRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASC 438
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI + E V + L+ QS + +EL+ C+E+ + G+K
Sbjct: 439 AVIGIPHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYK 481
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR V + + PL+ GKI + +R +H
Sbjct: 482 CPR-DVSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|221067818|ref|ZP_03543923.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220712841|gb|EED68209.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 518
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 59/333 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+L G CHV +P+F+ + L+A+ VT L+ VP ++ L V + S++
Sbjct: 219 ALLAAGGCHVMVPRFDPVAVLQAISTESVTDLLLVPTMIQMLVDHPDVHQ--YDLSSLQN 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+L G + L+ A + P AYGMTE + T ++ P+
Sbjct: 277 MLYGASPISEGLLDRAMKTIPSVGFTQAYGMTELAPVATVLS------------PE---- 320
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-------DGSS----HVGRILTRGAHVMLRYWD 170
+H+ +G G+ VC+ DG VG ++ RG VML YW+
Sbjct: 321 -----MHRQEGWAQGRHRSAGRATVCTEVRIVDPDGQEVARGEVGEVVVRGPGVMLGYWN 375
Query: 171 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
KP+ + + W+ TGD G +DD G V++V R I +GGENVY EVE+V+
Sbjct: 376 ----KPAETAAAIRNGWMHTGDGGRMDDEGYVFIVDRLKDMIVTGGENVYSVEVESVITT 431
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
HPG+ V+G+ S QW E + +L ++ L Q C+
Sbjct: 432 HPGVASCAVIGV----------------PSEQWGELVHVFIVRKTGAMLEADELIQFCKN 475
Query: 288 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ + +K PR V + PL+ GKI + +R
Sbjct: 476 R-IAHYKCPRE-VSFIDAMPLSGAGKILKTTLR 506
>gi|167628230|ref|YP_001678729.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
gi|167590970|gb|ABZ82718.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
Length = 558
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F +K LEAV++ T L VP + +A L S++
Sbjct: 255 LACVCKGATMVPLEYFTAKGVLEAVQRERCTVLYGVPTMF--IAELDHPDFDKYDLSSLR 312
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+M++ + ++ AYG TE S +T T D +LE
Sbjct: 313 TGIMAGSPCPIEVMRKVIDRMGIGEITIAYGQTEFSPVIT-QTRTDDSLE---------- 361
Query: 121 NVTPNSVHQPQGVC-VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFL 173
+ VC VGK PHVE+K+ + G + RG M Y++
Sbjct: 362 ----------RRVCTVGKALPHVEVKIVHPDTGLEIPRGTQGELCARGFGTMKGYYNNPE 411
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A + E WL TGD+ ++D+ G + GR I GGEN+YP EVE L HP +
Sbjct: 412 ATEAAIDAEGWLHTGDLATMDEEGYCRITGRAKDMIIRGGENIYPREVEEFLFTHPKVKD 471
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + E +AC+ L++ + +E E +R CR K ++ +
Sbjct: 472 VQVVGVPDPKYGEEALACIILKDGEEATE----------------EEIRYFCRGK-ISRY 514
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P+ +V + FP+T++GKI++ ++R + L
Sbjct: 515 KIPK-YVRFVDHFPMTASGKIQKFKLREIFIKEL 547
>gi|440700609|ref|ZP_20882849.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
gi|440276798|gb|ELP65015.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
Length = 510
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 49/326 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ +L G V KF++ L A+E+H VT+ P +M + + ++++ S++
Sbjct: 222 LPVLYAGGGVVLQRKFDAPGVLRAIEEHRVTNAWLAP-VMVNAVLEVPDRESYD-TTSMR 279
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ GG P +++ N+FP A AYG+TET S TF+ + L G
Sbjct: 280 FIVGGGEKTPEPVLRRIMNAFPNAWFADAYGLTETVSGDTFLD-REHGLSKLG------- 331
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYW-DQFLA 174
VG+P PH +++ D + +G I RG V YW D+
Sbjct: 332 -------------SVGRPVPHTRIRIVDDTGEEAPAGELGEITLRGPKVFAGYWRDEKAT 378
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
++ G W TGDIG +D+ G +++ R+ I SGGEN+ EVE VL +HP ++
Sbjct: 379 AAALRDG--WFHTGDIGHVDEEGFLYIDDRKKDMIVSGGENIATPEVERVLYEHPAVLEA 436
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+A+ R E+ A V R +++ D+ LR C+E+ L FK
Sbjct: 437 AVVGLAHPRWGEVPRAFVVFRPG---TDAGTDE-------------LRGFCQER-LAKFK 479
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
P F + + P T +GK+ + +R
Sbjct: 480 VPARFDIVDE-LPRTPSGKVLKRTLR 504
>gi|384214527|ref|YP_005605691.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
gi|354953424|dbj|BAL06103.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
Length = 564
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 145/317 (45%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AVEQ T+L VP + +A L + S++ + G P E+MK
Sbjct: 280 FDPLATLRAVEQEKCTALYGVPTMF--IAELDHPEFPKFDLTSLRTGIMAGAPCPIEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ AYGMTETS P +F + T + + + + V
Sbjct: 338 RVNTEMNMREVTIAYGMTETS-------------------PVSFQSATDDPLER-RVSTV 377
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PHVE+KV V G + TRG +ML YW++ V W+ TGD+
Sbjct: 378 GRIHPHVEVKVVDLEGRIVKRGERGELCTRGYSIMLGYWEEKEKTADVLDANGWMHTGDL 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R E + A
Sbjct: 438 ATIDDEGYCNIVGRIKDLVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYGEELCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+R+R L++E +R C + + K PR +V + FP+T
Sbjct: 498 WIRVRPGET----------------LTAEEVRAFC-DGQIAHNKIPR-YVEFVDEFPMTV 539
Query: 311 TGKIRRDEVRREVMSHL 327
TGKI++ +R V L
Sbjct: 540 TGKIQKFVMRDAVEQRL 556
>gi|295835793|ref|ZP_06822726.1| AMP-binding enzyme [Streptomyces sp. SPB74]
gi|295825696|gb|EFG64403.1| AMP-binding enzyme [Streptomyces sp. SPB74]
Length = 544
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 152/323 (47%), Gaps = 50/323 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F++++ LEAVE+ TSL VP + +A L S++ +
Sbjct: 255 GACVVIPAPAFDARATLEAVEKERCTSLYGVPTMF--IAELNLPDFASFDLTSLRTGIMA 312
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK +++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMSEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSV 178
H+ VG+ PH+E+KV S G + TRG VML YW D +V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEAV 412
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG
Sbjct: 413 DPGR-WMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLHTHPKISDVQVVG 471
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 297
+ +AR E V+ACV R+ + + + +R CR++ L +K P R
Sbjct: 472 VPDARYGESVLACVIPRDPAEAP---------------TLDEIRAFCRDR-LASYKIPSR 515
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
L VL FP+T +GK+R+ E+R
Sbjct: 516 LEVL--GSFPMTVSGKVRKIELR 536
>gi|408528321|emb|CCK26495.1| Putative acyl-CoA synthetase YngI [Streptomyces davawensis JCM
4913]
Length = 529
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 142/321 (44%), Gaps = 46/321 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE K+ LEAV+Q TSL VP + +A L S++ +
Sbjct: 243 GACIVIPAPSFEPKATLEAVQQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK + ++ YGMTETS T T D LE
Sbjct: 301 GSPCPVEVMKRVVSEMNMTEVSICYGMTETSPVST-QTRRDDDLE--------------- 344
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PHVE+K+ + G + TRG VML YW++
Sbjct: 345 --HRTG--TVGRVLPHVEVKIVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPERTDEAV 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + V+G+
Sbjct: 401 DPARWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVIGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V+ACV R+ + E +R C E L +K P
Sbjct: 461 PHERYGEEVLACVIPRDPADPP---------------TLEDVRAFC-EGQLAHYKVPAGV 504
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
+ FP+T +GK+R+ E+R
Sbjct: 505 RVLDN-FPMTVSGKVRKIELR 524
>gi|384431644|ref|YP_005641004.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333967112|gb|AEG33877.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 560
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E +EA+E+H VT VP + ++K + S++ L
Sbjct: 273 LFSGYKIVLLPRPEIGPIVEAIEKHRVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICL 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K A+LI YG++E S +T +P L G +
Sbjct: 331 SGAAPLPVEVAKR-FEELTGARLIEGYGLSEASP----VTHSNPVL----------GLIK 375
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
S+ G P P VE KV + V G ++ +G +VM YW++ +
Sbjct: 376 KGSI--------GMPFPSVEAKVVDEEGKEVPMGEVGELIVKGPNVMKGYWNR-PEETEK 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QH + VVG
Sbjct: 427 ALKDGWLYTGDMAKMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+ ++ + D + CR+ NL +K PR+
Sbjct: 487 VPDPYRGETVAAFLVLKPEYRGKVTEKD--------------IEAFCRQ-NLAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 532 -IQFRESLPKSSVGKILRRELREE 554
>gi|347540717|ref|YP_004848142.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643895|dbj|BAK77728.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 562
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 153/334 (45%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L G +F FE + L+ V + T+L VP + ++ L + + ++
Sbjct: 262 LACLTHGTTMIFPCEAFEPLAVLQTVAEEKCTALHGVPTMF--ISVLDHPRFSEFDLSTL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK ++ ++ AYGMTETS P +F
Sbjct: 320 RTGIMAGSPCPIEVMKRVVDTMHMKEVTIAYGMTETS-------------------PVSF 360
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ T V + VG PH+E+K+ DG + G +LTRG VML YWD
Sbjct: 361 QSATDTPVERKVST-VGLIHPHLEVKIV-DGEGRIVPRGETGELLTRGYSVMLGYWDDEP 418
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
W+ TGD+ ID+ G +VGR + GGENVYP E+E L +HP I
Sbjct: 419 KTREAIDPAGWMHTGDLAVIDETGYCNIVGRAKDMVIRGGENVYPREIEEFLYRHPKIQD 478
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ + R E + A +RLR+ + D+ +R C + + +
Sbjct: 479 VQVIGVPDDRFGEELCAWIRLRDG---ETATADE-------------IRAFC-QGQIAHY 521
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ +R+++ L
Sbjct: 522 KIPR-YIEFVDSFPMTITGKIQKFMMRQQMKEKL 554
>gi|440699134|ref|ZP_20881436.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
gi|440278386|gb|ELP66431.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
Length = 527
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 151/323 (46%), Gaps = 50/323 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV + TSL VP + +A L S++ +
Sbjct: 240 GACVVIPAPSFEPAATLRAVAEERCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGIMA 297
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 298 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE--------------- 341
Query: 126 SVHQPQGVCVGKPAPHVELKVC--SDGSSH----VGRILTRGAHVMLRYWDQ-FLAKPSV 178
H+ VG+ PH+E+KV ++G++ G + TRG VML YW + SV
Sbjct: 342 --HRTG--TVGRVLPHIEVKVVDPANGTTQPRGTAGELCTRGYSVMLGYWQEPEKTAESV 397
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG
Sbjct: 398 DPGR-WMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVG 456
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 297
+ + R E V+ACV E + E L +E L+ C E L +K P R
Sbjct: 457 VPHERYGEEVLACVIPHE--------------DTEPLTLAE-LQAFC-EGRLAHYKIPSR 500
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
L VL FP+T +GK+R+ E+R
Sbjct: 501 LRVL--DAFPMTVSGKVRKVELR 521
>gi|359771954|ref|ZP_09275394.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310909|dbj|GAB18172.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 547
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 142/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ + L AVE++ TSL VP + +A L +++ + G P ++
Sbjct: 264 PAFDPAATLSAVEKYQCTSLYGVPTMF--IAELSLPNFDDYDLTTLRTGIMAGSPCPEQV 321
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ +++ YGMTETS T T D LE +
Sbjct: 322 MRQVVERMHMSEVSICYGMTETSPVST-QTRADDELEL-------------------RVT 361
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + G TRG VM YW+Q V E W+ T
Sbjct: 362 TVGRVGPHLEIKVVDPVTGETVPRGTPGEFCTRGYSVMQGYWNQPEKTAEVLDAEGWMHT 421
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI + D G V + GR + GGEN+YP E+E L HP I+ V+G+ +A+ E
Sbjct: 422 GDIAVLADNGYVQITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEE 481
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A VRLR+ D + ++ ++ R K PR +V FP
Sbjct: 482 LMAWVRLRDGV------ADFTVEDLRTFADGQIARH----------KIPR-YVRVVDEFP 524
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ ++R E + L
Sbjct: 525 MTVTGKVRKVQMRTEAVELL 544
>gi|358455929|ref|ZP_09166154.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
gi|357080580|gb|EHI90014.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
Length = 501
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 142/320 (44%), Gaps = 48/320 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L+ GA + + F+ E VE+ +T L P I L S++
Sbjct: 230 VASLIRGATILPLAVFDVDKVGELVEREKITMLPGAPTIYHSLLE----AGGKHDLSSLR 285
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ P +++ YG+TE ++ T PG +F
Sbjct: 286 CAVTGSADIPVELIRRMKAELPFQHIMTGYGLTEAGTA---------TASRPGD---SFE 333
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ VG P +E+ V DG +L RG VM Y+D LA
Sbjct: 334 SIA---------TTVGAPCDGIEVAVAGDG-----EVLIRGYSVMQGYFDDPLATAETVD 379
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+GS+D+ G + +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 380 ADGWLHTGDLGSLDERGYLKIVGRKKDMFIVGGFNAYPAEIEGYLLEHPAVAQAAVIGVP 439
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ARL E+ A + R + + SK + + GFKAPR FV
Sbjct: 440 DARLGEVCKAFIVRRAGAEVTAEEVMSWSKER-----------------MAGFKAPR-FV 481
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ PL +TGK+ +D++R
Sbjct: 482 EFLDALPLNATGKVMKDQLR 501
>gi|365872354|ref|ZP_09411892.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|421051469|ref|ZP_15514463.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363993499|gb|EHM14722.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392240072|gb|EIV65565.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898]
Length = 546
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ LEA+E + VP + +A L + +++ + G P E+
Sbjct: 255 PGFDPGRTLEAIETERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + A + AYGMTETS ++ TL+D L+ +
Sbjct: 313 MKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+K+ S G + TRG VML YW+ V + W+ T
Sbjct: 353 TVGRAHPHIEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E
Sbjct: 413 GDLAVMREDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+R +++ + +R + L +K PR +V + FP
Sbjct: 473 LCAWVRMRPG---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFP 515
Query: 308 LTSTGKIRRDEVRREVM 324
+T TGK+R+ E+R++ +
Sbjct: 516 MTVTGKVRKIEMRQQTI 532
>gi|320450973|ref|YP_004203069.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
gi|320151142|gb|ADW22520.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
Length = 560
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 145/317 (45%), Gaps = 47/317 (14%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
V +P+ E + +EA+E+H VT VP + ++K + S++ L+G LP
Sbjct: 280 VLLPRPEIHAIVEAIEKHQVTHFPGVPTLYVAFNHFPGIEK--RNVKSIRICLSGAAPLP 337
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+ K A+LI YG++E S T P Q G + S+
Sbjct: 338 VEVAKR-FEEITGARLIEGYGLSEASPV---------THSNPVQ-----GEIKKGSI--- 379
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
G P P V+ KV + V G ++ +G ++M YW++ + + + WL
Sbjct: 380 -----GMPLPSVDAKVVDEEGKEVPMGEVGELVVKGPNIMKGYWNR-PEETQKALKDGWL 433
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +D G ++V R+ I +GG N+YP EVE VL QH + VVG+ +
Sbjct: 434 FTGDMARMDQDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGVPDPYRG 493
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E V A + L+E ++ + D + CR+ NL +K PR+ + +R
Sbjct: 494 ETVAAFLVLKEGYKGKVTEKD--------------IEAFCRQ-NLAAYKVPRI-IQFRDS 537
Query: 306 FPLTSTGKIRRDEVRRE 322
P TS GKI R E+R E
Sbjct: 538 LPKTSVGKILRRELREE 554
>gi|410582941|ref|ZP_11320047.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermaerobacter subterraneus DSM 13965]
gi|410505761|gb|EKP95270.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermaerobacter subterraneus DSM 13965]
Length = 567
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 146/322 (45%), Gaps = 47/322 (14%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
VGA VF+ K++ + ++A+E+H VT ++ +P + +L V++ + SV++ L
Sbjct: 281 VGATAVFLRKYDVRDVMDALERHRVTHVLLLPMMWQELLQQPGVRE--RDFSSVRRCLYA 338
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
+ E + E FP A ++ G TE + F P+
Sbjct: 339 MAPMAPERIAEIQALFPNADVVLGSGQTEFTPPTVFQR--------------------PH 378
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVST 180
H + G P ++++ D VG I+ RG M YW+ A +
Sbjct: 379 HQHT-KPASWGLPTVMTDVRIMDDQGRLLPRGQVGEIVYRGPQCMTAYWNNPEATAE-AF 436
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
W +GD+G +D+ G VW R+ +K+GGENV EVE LL HP + VVG+
Sbjct: 437 RHGWFHSGDVGWMDEEGVVWFTDRKKDMVKTGGENVASIEVERALLAHPAVAECAVVGLP 496
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R E V A V L+ Q +E E L HCRE+ L GFK P+ V
Sbjct: 497 HDRWGEAVTAFVLLKPGSQATE----------------EELIAHCRER-LAGFKVPKR-V 538
Query: 301 LWRKPFPLTSTGKIRRDEVRRE 322
++ FP T TGKI++ +R++
Sbjct: 539 VFATEFPRTGTGKIQKHVLRQQ 560
>gi|357039287|ref|ZP_09101081.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358186|gb|EHG05954.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 547
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 46/329 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ GA V + KF+ LE VE T++ VP + +A L +K S++ +
Sbjct: 257 VTGAAMVPVEKFDPAKVLETVEVEKCTAVHGVPTMF--IAELEEMKNKKYNTASLRTGVM 314
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P+E+MK N+ +++ YG TE S +T DP
Sbjct: 315 AGAPCPTEVMKAVVNTMGASEICITYGQTEASPGITMTRTDDPI---------------- 358
Query: 125 NSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
+ + VG+ P+VE+KV D V G + TRG HVM Y++ A S
Sbjct: 359 ----ELRVSSVGRALPNVEVKVVDPDTGREVPPGIQGELCTRGYHVMKGYYNMPEATESA 414
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGD+ +D+ G + GR I GGEN+YP E+E L H + + +VG
Sbjct: 415 IDKDNWLHTGDLAIMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHTKVRDVQIVG 474
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A ++L+ D +S + E ++ C K ++ FK P+
Sbjct: 475 VPSQKYGEEVAAFIQLK----------DGTSA------TVEEFKEFCTGK-ISRFKIPKF 517
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
F+ + +P T++GKI++ +R + + L
Sbjct: 518 FIFVDE-YPTTASGKIQKFRLREQALEAL 545
>gi|218295731|ref|ZP_03496527.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
gi|218243890|gb|EED10417.1| AMP-dependent synthetase and ligase [Thermus aquaticus Y51MC23]
Length = 557
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 47/324 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G V +P+ E + +EA+E+H VT VP + ++K + S++ L
Sbjct: 271 LYSGYKIVLLPRPEIHAVVEAIEKHGVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICL 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ K A+L+ YG++E S +T +P L G V
Sbjct: 329 SGAAPLPVEVAKR-FEEITGARLLEGYGLSEASP----VTHSNPVL----------GPVK 373
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
S+ G P P VE KV + V G ++ +G +VM YW++ +
Sbjct: 374 KGSI--------GMPLPSVEAKVVDEEGKEVPLGEVGELIVKGPNVMKGYWNR-PEETQK 424
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL H + VVG
Sbjct: 425 ALKDGWLFTGDLARMDEDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYGHEAVQEAAVVG 484
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A + L+E+++ + D + CR NL +K PR+
Sbjct: 485 VPDPYRGETVAAFIVLKEAYRGKVTEKD--------------IEAFCR-ANLAAYKVPRI 529
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+ +R+ P +S GKI R E+R E
Sbjct: 530 -IQFREGLPKSSVGKILRRELRDE 552
>gi|302557512|ref|ZP_07309854.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
gi|302475130|gb|EFL38223.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 146/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + LEAV++ TSL VP + +A L S++ +
Sbjct: 250 GACIVVPAPSFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPGFASYDLTSLRTGIMA 307
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 308 GSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE--------------- 351
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 352 --HRTG--TVGRVLPHIEVKVVDPATGVTLPRGAAGELCTRGYSVMLGYWNEPEKTAEAV 407
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I I VVG
Sbjct: 408 DAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADIQVVGT 467
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
A+ R E V+ACV R+ D + E LR C ++ L +K P RL
Sbjct: 468 AHERYGEEVLACVVPRDP-------ADPPTL--------EELRAFCADR-LAHYKIPSRL 511
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 512 QLL--DTFPMTVSGKVRKVELR 531
>gi|443686109|gb|ELT89489.1| hypothetical protein CAPTEDRAFT_222402 [Capitella teleta]
Length = 577
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F ++ L+A+EQ TSL P + D+ L DS+ + G P E+MK
Sbjct: 296 FNPEACLKAIEQEKCTSLYGTPTMFIDILHLPNFDDY--KIDSLNTGVMAGSPCPIEVMK 353
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYG TE +S +TF T D T+E Q +
Sbjct: 354 QVRTKLHMPEVTIAYGTTE-NSPVTFQTYQDDTIER-------------------QVSTI 393
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+P HVE+KV V G + RG VM Y+ A V + W TGD+
Sbjct: 394 GRPLHHVEVKVVDREGRIVPVNTPGELCIRGHVVMHSYYQDEAATAEVIGPDRWYKTGDL 453
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ +VGR I GGEN+YP +VE +L ++ I + VVG+ + RL E V A
Sbjct: 454 ATLDEHSYAKIVGRIKDMIIRGGENIYPLDVEQILYENSKIEDVQVVGVPDPRLQEQVCA 513
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++L+E Q++ E +++ C+ K ++ FK P ++ + + FPLT
Sbjct: 514 WIKLKEG---------QTATADE-------IKEFCKGK-ISHFKIPH-YIQFVEEFPLTV 555
Query: 311 TGKIRRDEVRREVMSHL 327
TGK+++ ++R L
Sbjct: 556 TGKVQKYKIREMATEQL 572
>gi|398974125|ref|ZP_10684862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
gi|398142009|gb|EJM30914.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM25]
Length = 565
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ +++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPQRAEFDLSTLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPNATAEAIDAAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFAHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+S
Sbjct: 544 TGKIQKFRMREISIEELRS 562
>gi|383642924|ref|ZP_09955330.1| AMP-binding domain protein [Streptomyces chartreusis NRRL 12338]
Length = 532
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 143/321 (44%), Gaps = 46/321 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ K+ LEAV+Q TSL VP + +A L S++ +
Sbjct: 243 GACMVIPAPSFDPKATLEAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 301 GSPCPVEVMKRVVAEMHMQQVSICYGMTETSP-VSLQTRMDDDLE--------------- 344
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+K+ + G + TRG VML YW++
Sbjct: 345 --HRTG--TVGRVLPHIEVKIVDPATGVTRPRGTAGELCTRGYSVMLGYWNEPEKTAEAV 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 401 DAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIQDVQVVGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V+ACV + L+ + LR C+ + L +K P
Sbjct: 461 PHDRYGEEVLACV---------------IPHDPADPLTLDELRTFCQGR-LAHYKIPTGL 504
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
L FP+T +GK+R+ E+R
Sbjct: 505 QLLDS-FPMTVSGKVRKVELR 524
>gi|167564616|ref|ZP_02357532.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167571758|ref|ZP_02364632.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 575
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF FE + L AV T+L VP + +A L ++
Sbjct: 276 LACMSVGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSKMHMSEVTIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 375 QSSTTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 433 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR +E LR+ CR + +K
Sbjct: 493 QVFGVPDSKYGEEVCAWIVLRAGETMTEDE----------------LREFCR-GQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 536 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 567
>gi|51245054|ref|YP_064938.1| acyl-CoA synthetase [Desulfotalea psychrophila LSv54]
gi|50876091|emb|CAG35931.1| probable long-chain fatty-acid-CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 568
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 158/326 (48%), Gaps = 51/326 (15%)
Query: 4 LMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK-KTWKGRDSVK 60
L VGAC + IP F++ + L+A+E+ T++ VP + +A L K +
Sbjct: 274 LSVGAC-IVIPAEHFDALATLKAIEEESCTAIHGVPTMF--IAELEHPDFKNFDMSTLRT 330
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ G LP +LMK +++ YG TE +S +T +T ++E +
Sbjct: 331 GIMAGAPCLP-QLMKRVMEDMHCPEILIGYGETE-ASPITHLTTRADSMELRTE------ 382
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSS----HVGRILTRGAHVMLRYWDQFLA 174
VGK PH E+K+ + G++ +G I RG H+M Y+ Q
Sbjct: 383 -------------TVGKNLPHQEVKIVHLATGATVPLGEIGEICFRGYHIMQGYYGQADK 429
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V WL +GD+G++D G V + GR I GGEN+YP+E+E L HPG+I +
Sbjct: 430 TAEVIDKNGWLYSGDLGTMDAHGYVRITGRCKEMIIRGGENIYPKEIEDFLFSHPGVIQV 489
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + E ++A ++LR + + S E +R +CR+K ++ FK
Sbjct: 490 AVFGVPDEYYGEEIMAWIQLR----------------PDEICSEEEIRNYCRDK-ISHFK 532
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
P+ ++ + FP+T TGK+++ +R
Sbjct: 533 IPK-YIRFVDEFPMTVTGKLQKFRMR 557
>gi|77459877|ref|YP_349384.1| AMP-binding protein [Pseudomonas fluorescens Pf0-1]
gi|77383880|gb|ABA75393.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens
Pf0-1]
Length = 565
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ +++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPQRAEFDLSTLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPNATAEAIDAAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+S
Sbjct: 544 TGKIQKFRMREISIEELRS 562
>gi|403718190|ref|ZP_10943189.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208635|dbj|GAB97872.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 552
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 147/323 (45%), Gaps = 46/323 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC + P FE + + AV+ TSL VP + +A L S++ +
Sbjct: 253 GACMIIPAPSFEPAATMRAVQDERATSLYGVPTMF--IAELALPDFADYDVSSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK+ + ++ YGMTETS ++ MT D L +
Sbjct: 311 GSPCPVEVMKQVVSQMHMREVAICYGMTETSP-VSTMTRRDDDLRRRTE----------- 358
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 179
VG+ PH+E+K+ + G + TRG VML YW+
Sbjct: 359 --------TVGRVMPHLEVKIVDPVTEQETPRGVSGELCTRGYSVMLGYWESPEKTAEAI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD+ ++DD G +VGR + GGEN+YP E+E L HPGI + VVG+
Sbjct: 411 DADGWMHTGDLATMDDDGYCAIVGRIKDMVIRGGENIYPREIEEFLYSHPGISDVQVVGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A W ++ + L ++ +R+ C K L +K PR +
Sbjct: 471 PDVKYGEELMA-------WIIAKPGSEG--------LDADDIREFCSGK-LAHYKIPR-Y 513
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
V FP+T TGKIR+ ++R E
Sbjct: 514 VHVVDSFPMTVTGKIRKVQMRAE 536
>gi|389817941|ref|ZP_10208454.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
gi|388464231|gb|EIM06564.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
Length = 547
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 151/332 (45%), Gaps = 46/332 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + + +FE K L+ V+ T L VP + +A L + + +++
Sbjct: 250 MAAVTHSTTMIIAEQFEPKRVLQMVQDEKCTGLHGVPTMF--IAELNHPEFSSFDTSTLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ + + AYG TE+S +T T D +E
Sbjct: 308 TGIMAGSSCPIEVMKKVITDMGASDITIAYGQTESSPVIT-QTRADDDIE---------- 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
+ VGKP VE+K+ + V G + TRG HVM Y+ A
Sbjct: 357 ---------KRVSTVGKPHTEVEVKIIDPATGEVVEIGIPGELCTRGYHVMKGYYKNEEA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL TGDI D+ + + GR + GGEN+YP E+E L QHP I +
Sbjct: 408 TKTAVDREGWLHTGDIAVQDEEDYIAITGRIKDMVIRGGENIYPREIEEFLYQHPSIQDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E ++A V L++ Q LS E L+ +C+ K ++ K
Sbjct: 468 QVVGVPDPKYGEELMAWVILKKGEQ----------------LSVEELKAYCKGK-ISRHK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR ++ + K +P+T++GKI++ ++R + H
Sbjct: 511 IPR-YIEFTKEYPMTASGKIQKFKLRELSVEH 541
>gi|374620358|ref|ZP_09692892.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374303585|gb|EHQ57769.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 560
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 147/320 (45%), Gaps = 47/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L+ V+ T+L VP + + L S++ + G P E+MK
Sbjct: 280 FDPEQTLQTVQDEQCTALHGVPTMF--ITELDHPNFGHFDLSSLRTGIMAGAPCPVEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYG TE S + MTL D +L+ + V
Sbjct: 338 RVISEMHMQDILIAYGQTELSP-INNMTLPDDSLKRRTE-------------------TV 377
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ P VE+K+ D + HV G I TRG VM YW+ WL +GD
Sbjct: 378 GRAMPWVEIKII-DEAGHVVPVGQKGEICTRGYSVMQGYWNDPEKTAETIDASGWLHSGD 436
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
I ++D G V +VGR I GGEN+YP EVE L QHP I + V GI + ++ E V
Sbjct: 437 IATMDASGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAITEVQVFGIPDEKMGEEVC 496
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L E L+++ ++ +C+++ +T FK PR + + +P+T
Sbjct: 497 AWIQLNEGAD----------------LTADDVKAYCKDQ-ITHFKVPR-HIRFVSEYPMT 538
Query: 310 STGKIRRDEVRREVMSHLKS 329
TGKI++ +R E+++ L
Sbjct: 539 VTGKIQKFVMRDEMLALLSD 558
>gi|149179825|ref|ZP_01858330.1| acyl-CoA synthase [Bacillus sp. SG-1]
gi|148852017|gb|EDL66162.1| acyl-CoA synthase [Bacillus sp. SG-1]
Length = 547
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 155/331 (46%), Gaps = 52/331 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + VGA V + +F+ + L+ V+ T L VP + +A L S++
Sbjct: 252 MACVSVGAAMVPVQEFDPGTVLQTVQDEKCTGLHGVPTMF--IAELNHPGFDQFDLSSLR 309
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK + ++ AYG TE+S +T DP +ET
Sbjct: 310 TGIMAGSNCPIEVMKGVIDRMGADEITIAYGQTESSPVITQTRTDDPIELRVET------ 363
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ P+VE+KV G+ G + TRG VM Y+
Sbjct: 364 -----------------VGRALPNVEVKVVQPGTDEEVPFGVQGELCTRGYLVMKGYYKN 406
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A + + WL TGD+ +D+ G + GR I GGEN+YP E+E L HP +
Sbjct: 407 EEATAAAIDSDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYTHPKV 466
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVGI + E V+A V L+E Q++ S++ LR++C+ K ++
Sbjct: 467 LDVQVVGIPDKVYGEEVMAWVILKEG---------QTA-------SADELREYCKGK-IS 509
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K PR ++ + +P+T++GKI++ ++R+E
Sbjct: 510 RHKVPR-YIEFTDAYPMTASGKIQKYKLRKE 539
>gi|108801400|ref|YP_641597.1| AMP-binding domain-containing protein [Mycobacterium sp. MCS]
gi|119870553|ref|YP_940505.1| AMP-binding domain-containing protein [Mycobacterium sp. KMS]
gi|108771819|gb|ABG10541.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119696642|gb|ABL93715.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 540
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 142/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++ L A+E+ T + VP + +A L S++ + G P E+
Sbjct: 255 PGFDAGLTLAAIEKERCTGVYGVPTMF--IAMLGHPDFAGTDLSSLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK N ++ AYGMTETS ++ TL D L+ +
Sbjct: 313 MKRCINEMHMTEVAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + G TRG VML YW+ + W+ T
Sbjct: 353 TIGRAHPHVEVKIVDPDTGETVERGEPGEFCTRGYSVMLGYWNDPDKTAQAIDADGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G +VGR + GGEN+YP EVE L HP I V+G+ + + E
Sbjct: 413 GDLAVMRDDGYCNVVGRIKDMVIRGGENIYPREVEEFLHTHPDIDDAQVIGVPDDKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R+R L++E +R+ R+K L +K PR +V FP
Sbjct: 473 ICAWIRMRPG---------------RPPLTAEAVREFARDK-LAHYKIPR-YVHVVDEFP 515
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ ++R E + L
Sbjct: 516 MTVTGKVRKVDMRAETVRLL 535
>gi|343962485|dbj|BAK62830.1| hypothetical protein [Pan troglodytes]
Length = 615
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 320 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKVPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|330808606|ref|YP_004353068.1| long-chain-fatty-acid--CoA ligase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376714|gb|AEA68064.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 565
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLKAVAEEKATALYGVPTMF--IALLDQPQRGDFDVSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N A++ AYGMTETS +L+T P + + V
Sbjct: 342 RVINEMHMAEVQIAYGMTETSPV---------SLQT-----------GPTDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + VG + TRG VML YW+ + W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNNPKGSTDAIDPDGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G V +VGR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ATMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHSASEQE----------------LQAWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELRD 562
>gi|407982490|ref|ZP_11163166.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376002|gb|EKF24942.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 562
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 141/320 (44%), Gaps = 47/320 (14%)
Query: 11 VFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 68
+ IP FE + L A+E T++ VP + +A L + S++ + G
Sbjct: 275 IVIPAAGFEPAATLTAIETERCTAVYGVPTMF--IAMLADPDLPHREVSSLRTGIMAGAT 332
Query: 69 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 128
P ELMK N A L AYGMTETS ++ T D L+
Sbjct: 333 CPMELMKRCINELNMAGLAIAYGMTETSP-VSCQTRVDDDLDR----------------- 374
Query: 129 QPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGE 182
+ VG+ PHVE+K+ + G TRG VM YW+ +
Sbjct: 375 --RTATVGRVHPHVEIKIVDPVTGKTLPRGATGEFCTRGYSVMTGYWNDAERTREAIDPD 432
Query: 183 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 242
WL TGD+ + + G +VGR + GGENVYP E+E L HP I + VVG+ +
Sbjct: 433 GWLHTGDLAVMREDGYCQIVGRIKDMVIRGGENVYPREIEEFLHTHPDIEDVQVVGVPDE 492
Query: 243 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 302
R E + A +++R L + +R + R+K L FK PR +V+
Sbjct: 493 RYGEEICAWIKMRPG---------------RPPLDAAAVRAYARDK-LAHFKIPR-YVVV 535
Query: 303 RKPFPLTSTGKIRRDEVRRE 322
FP+T TGK+R+ ++R E
Sbjct: 536 VDEFPMTVTGKVRKVQMRDE 555
>gi|378951790|ref|YP_005209278.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
gi|359761804|gb|AEV63883.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
Length = 565
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLKAVAEEKATALYGVPTMF--IALLDQPQRGDFDVSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N A++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMAEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + VG + TRG VML YW+ + W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNIVSRGAVGELCTRGYSVMLGYWNNPKGTTDAIDPDGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G V +VGR I GGEN+YP E+E HP + + V+GI +R E ++A
Sbjct: 442 ATMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIIA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHSASEQE----------------LQAWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSL 330
TGKI++ +R + L+ +
Sbjct: 544 TGKIQKFRMREISIEELREV 563
>gi|379737945|ref|YP_005331451.1| putative fatty-acid--CoA ligase [Blastococcus saxobsidens DD2]
gi|378785752|emb|CCG05425.1| Putative fatty-acid--CoA ligase [Blastococcus saxobsidens DD2]
Length = 502
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM---ADLATLIRVKKTWKGRD 57
+ L GA V +P FE L + + + + TVPAI + A R+ +
Sbjct: 213 LPTLQCGAAAVIMPTFEVGRFLRVIPEERIAIVTTVPAIFWLAINQAEFPRIDVS----- 267
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
V+ GG + +L++ SFP+A++ + +G++ETSS TF LP
Sbjct: 268 GVRYTTYGGAPIAPDLVQAIQRSFPEARVGNGFGLSETSSISTF-------------LPH 314
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
+ + +SV G PAP V+L + +D + VG +L RGA V+ YW++ A
Sbjct: 315 EYASTHADSV--------GFPAPVVDLDLADADPETGVGELLIRGAQVVQGYWNKPEATV 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
T + WL +GD+ IDD G V++V R I GGENVY EVE VL PG+ + V
Sbjct: 367 QAFT-DGWLHSGDLARIDDDGFVYIVDRAKDMINRGGENVYCVEVENVLAAAPGVFEVAV 425
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + + E V A V + + + D+ R + L FKAP
Sbjct: 426 VGVPDQMMGEKVGAVVVPQPGIDF---DVDE-------------FLGFVRTR-LADFKAP 468
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRRE 322
+ V+ P GK+ + +R E
Sbjct: 469 QYVVVRSAALPRNPGGKVLKPVLRTE 494
>gi|114669320|ref|XP_511878.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan troglodytes]
Length = 572
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 277 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 331
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 332 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 372
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 373 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 431
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 432 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 491
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 492 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 534
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 535 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 570
>gi|397780243|ref|YP_006544716.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
gi|396938745|emb|CCJ36000.1| AMP-dependent synthetase/ligase [Methanoculleus bourgensis MS2]
Length = 566
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA + GA + P F +++ L AV+ T+L VP + +A L + D++
Sbjct: 262 MACVTHGAAMILPSPVFNAEAVLRAVQDERCTALHGVPTMF--IAELCHPDFSKYRLDTL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P+E+M+E + ++ YG TETS +T T+ DP
Sbjct: 320 RTGIMAGSPCPTEVMREVNREMHMSDIVIVYGQTETSPGVTMTTIDDPL----------- 368
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ + VG+P PH E+K+ + + G I RG VM Y++
Sbjct: 369 ---------ELRVSTVGRPFPHTEIKIVDPNTKRIVPRGETGEICARGYCVMRCYYNNPN 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A + W TGD+G +D+ V +VGR + GGEN+YP E+E L HP I
Sbjct: 420 ATRATIDENGWNHTGDLGVMDEEDYVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIAD 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E ++A W +E+ + L+ +++ CR + + F
Sbjct: 480 AYVIGVPDKKYGEELMA-------WIKTENGAE---------LTEAAVKEFCRGR-IAHF 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + FP+T +GKI + ++R + L
Sbjct: 523 KIPR-YVKFVDEFPMTVSGKIMKFKMREMAIEEL 555
>gi|299533478|ref|ZP_07046858.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298718535|gb|EFI59512.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 518
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ G CHV +P+F+ + L+A+ VT + VP ++ L + K S+++
Sbjct: 219 ALFAAGGCHVMVPRFDPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQ 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP---QA 118
+ G + L+ A + P + AYGMTE S T ++ PG+ ++
Sbjct: 277 MAYGASPISEGLLDRAMRTIPDVDFVQAYGMTEVSPIATILSA--EMHREPGRAKGRHRS 334
Query: 119 FGNVTPNS---VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 175
G T + + P+G + P E VG I+ RG VML YW++ A+
Sbjct: 335 AGRATACTEVRIVDPEG----REVPRGE----------VGEIVVRGPGVMLGYWNK-PAE 379
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HP +
Sbjct: 380 TEAAIRDGWMHTGDGGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCA 439
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + E V + L+ QS + +EL+ C+E+ + G+K
Sbjct: 440 VIGIPHEHWGEQVHVFIVLKPG---------QSLEAQELI-------HFCKER-IAGYKC 482
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
PR V + + PL+ GKI + +R +H
Sbjct: 483 PR-DVSFVEAMPLSGAGKILKTSLRAPFWAH 512
>gi|423719772|ref|ZP_17693954.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367260|gb|EID44540.1| acyl-CoA synthetase, AMP-binding [Geobacillus thermoglucosidans
TNO-09.020]
Length = 544
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 52/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V I +F K L+ V+ T+L VP + +A L S++
Sbjct: 248 LACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 306 TGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET------ 359
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ P+VE+K+ ++ G + TRG HVM Y+
Sbjct: 360 -----------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKN 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L +HP I
Sbjct: 403 PGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKI 462
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + + E V+A + L+E Q++ ++E +R+ CR K ++
Sbjct: 463 LDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFCRGK-IS 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR ++ + +P+T++GKI++ ++R
Sbjct: 506 RHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|403722609|ref|ZP_10945108.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206504|dbj|GAB89439.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 543
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 137/317 (43%), Gaps = 45/317 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPS 71
P F+ + L AV ++ TSL VP + L+ D S++ + G P
Sbjct: 257 PAFDPAATLRAVSEYRCTSLYGVPTMFIAELALLDSHGDASDYDLSSLRTGIMAGSPCPE 316
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
M++ + ++ YGMTETS T + DP G
Sbjct: 317 HTMRQVVDRMHMREVSICYGMTETSPVSTQTRIDDPLELRVG------------------ 358
Query: 132 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+KV + G TRG VM YW+Q + W+
Sbjct: 359 --TVGRVGPHLEIKVVDPATGETLRRGETGEFCTRGYSVMKGYWNQPEKTAEAIDTDGWM 416
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ +A+
Sbjct: 417 HTGDLAVMDDNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYG 476
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A VRLR+ D + + + ++ R K PR +V K
Sbjct: 477 EELMAWVRLRDGVS------DFTEDDLREFATGKIARH----------KIPR-YVHVVKD 519
Query: 306 FPLTSTGKIRRDEVRRE 322
FP+T TGK+R+ ++R E
Sbjct: 520 FPMTVTGKVRKVQMRAE 536
>gi|313213478|emb|CBY40446.1| unnamed protein product [Oikopleura dioica]
Length = 540
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 151/334 (45%), Gaps = 48/334 (14%)
Query: 3 MLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ C + IP F ++ L+A + T P + DL R ++ ++
Sbjct: 244 FMLTRGCKLVIPAPTFNAEVGLDAAQAEGATVWYGTPTMFVDLLASPRRSSFVAPQEGIR 303
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ G P +L+++ + K+ AYG TE +S +TFMT
Sbjct: 304 GLM-AGSICPEQLLRDLDQHY-NCKVFVAYGTTE-NSPITFMT----------------- 343
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
T S + + VG PH E K+ G + RG V Y+++
Sbjct: 344 --TNESTFKQRTTTVGCVMPHTEAKLVDTEHGKTVEMGEKGEMCIRGPCVFKGYFNEPEK 401
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + W TGD+ ++D+ G V +VGR I GGEN+YP EVE+ LL+HP ++
Sbjct: 402 TAEVVDEDGWYHTGDLATMDESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVDA 461
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + RL E V A VRL + L+++ L+Q+ E N+T +K
Sbjct: 462 QVVGVPSKRLGEEVAAYVRLASGAE----------------LTADELKQYGFE-NMTHWK 504
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + +PLT TGKIR+ E+R + K
Sbjct: 505 VPK-YIKVVEEYPLTVTGKIRKVELREYAKNDFK 537
>gi|312110768|ref|YP_003989084.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311215869|gb|ADP74473.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 544
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 52/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V I +F K L+ V+ T+L VP + +A L S++
Sbjct: 248 LACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 306 TGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET------ 359
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ P+VE+K+ ++ G + TRG HVM Y+
Sbjct: 360 -----------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKN 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L +HP I
Sbjct: 403 PGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKI 462
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + + E V+A + L+E Q++ ++E +R+ CR K ++
Sbjct: 463 LDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFCRGK-IS 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR ++ + +P+T++GKI++ ++R
Sbjct: 506 RHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|397493196|ref|XP_003817498.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Pan paniscus]
Length = 572
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 277 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 331
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 332 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 372
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 373 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 431
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 432 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 491
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 492 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 534
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 535 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 570
>gi|194374009|dbj|BAG62317.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 160 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 214
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 215 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 255
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 256 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 314
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 315 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 374
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 375 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 417
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 418 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 453
>gi|428223073|ref|YP_007107243.1| o-succinylbenzoate--CoA ligase [Synechococcus sp. PCC 7502]
gi|427996413|gb|AFY75108.1| O-succinylbenzoate-CoA ligase [Synechococcus sp. PCC 7502]
Length = 511
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 37/319 (11%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
G V +P+F+ EA+ +T + VP ++ + + ++ IL GG
Sbjct: 223 GIPMVLLPRFDIAEVCEAIANQAITFISLVPTMLVRILYSPEFQANLLAWQKLQGILLGG 282
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+L+ + + ++ YG+TE SS +T + D L+ G +A G
Sbjct: 283 AAASPDLLDKCLKY--QLPIMPTYGLTEASSQVTTLLTKDILLKN-GSSGKALG------ 333
Query: 127 VHQPQGVCVGKPA-PHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+Q + VC+ P E+ G +G+I+ RG +VM Y L P + G WL
Sbjct: 334 CNQVRIVCLDDPTGDQTEM-----GIGAIGQIMVRGENVMKGY----LHHPDL--GINWL 382
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
+TGD+G +D G ++++ RR+ I SGGEN+YP E+EA+L +HP I VVGIA+
Sbjct: 383 NTGDVGYLDADGFLYVLNRRSDLIISGGENIYPTEIEAILAKHPQIQTACVVGIADKEWG 442
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRK 304
E+VVA ++L +S N E+ L +R+ C + L +K P +L+++
Sbjct: 443 EIVVAVLQLI-----------KSETNLEINLGE--VRKFCEDAGLARYKLPQKLYIV--N 487
Query: 305 PFPLTSTGKIRRDEVRREV 323
T+ GK+ R VR +
Sbjct: 488 AMTTTANGKVSRKLVREAI 506
>gi|21224520|ref|NP_630299.1| AMP-binding domain-containing protein [Streptomyces coelicolor
A3(2)]
gi|4455741|emb|CAB36604.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces coelicolor
A3(2)]
Length = 541
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 146/322 (45%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P E + LEAV++ TSL VP + +A L S++ +
Sbjct: 253 GACIVIPAPSSEPAATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 311 GSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE--------------- 354
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 355 --HRTG--TVGRVLPHIEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAI 410
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+
Sbjct: 411 DPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGV 470
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV +R++ L+ E LR +C L +K P RL
Sbjct: 471 PHERYGEEVLACVVVRDAAD---------------PLTLEELRAYC-AGQLAHYKVPSRL 514
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 515 QLL--DSFPMTVSGKVRKVELR 534
>gi|404424017|ref|ZP_11005628.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403652493|gb|EJZ07537.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 538
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L VE T+L VP + +A L S++ + G P E+
Sbjct: 253 PGFDPGITLATVESERCTALYGVPTMF--IAMLGHPDFAQFDLSSLRTGIMAGSVCPVEV 310
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK A++ YGMTETS ++ TL D LE +
Sbjct: 311 MKRVVADMHMAEVAICYGMTETSP-VSCQTLVDDDLER-------------------RTA 350
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PH+E+K+ + G TRG VML YWD+ + W+ T
Sbjct: 351 TIGRAHPHIEVKIVDPDTGETVERGQPGEFCTRGYSVMLGYWDEPAKTAEAIDADGWMHT 410
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G +VGR + GGENVYP E+E L HP I V+G+ +A+ E
Sbjct: 411 GDLAVMREDGYCAVVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDAQVIGVPDAKYGEE 470
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
V A VR+ K L +E LR K L +K PR +V+ FP
Sbjct: 471 VCAWVRM---------------KPGRAPLDAESLRAFATGK-LAHYKIPR-YVVVVDEFP 513
Query: 308 LTSTGKIRRDEVRRE 322
+T TGKIR+ ++R E
Sbjct: 514 MTVTGKIRKVDMRDE 528
>gi|336235213|ref|YP_004587829.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362068|gb|AEH47748.1| Long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 544
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 52/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V I +F K L+ V+ T+L VP + +A L S++
Sbjct: 248 LACVSVGATMVPIQEFNPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 306 TGIMAGSPCPIEVMKAVMEKMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET------ 359
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ P+VE+K+ ++ G + TRG HVM Y+
Sbjct: 360 -----------------VGRALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKN 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A V + WL TGD+ +D+ G + GR I GGEN+YP E+E L +HP I
Sbjct: 403 PGATKEVIDEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKI 462
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + + E V+A + L+E Q++ ++E +R+ CR K ++
Sbjct: 463 LDVQVVGVPDEKYGEEVMAWIILKEG---------QTA-------TAEEIREFCRGK-IS 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR ++ + +P+T++GKI++ ++R
Sbjct: 506 RHKIPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|410980755|ref|XP_003996741.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Felis catus]
Length = 615
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 41/331 (12%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F+ K ALEA+ + T L P + D+ + + D +
Sbjct: 320 MVSLMYGATLILPCPTFDGKKALEAISKERGTILYGTPTMFVDILN----QPDFSSYD-I 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ + +L+ AYG TE +S +TFM + T+E Q
Sbjct: 375 SSMCGGVIAGSPAPPELIRAIIDKLNMKELVVAYGTTE-NSPVTFMNFAEDTVE---QKA 430
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
++ G + P++ Q + G A EL G + RG VML YW +
Sbjct: 431 ESVGRIMPHTEAQIVDMKTGTLA---ELNTS-------GELCIRGYCVMLGYWGEPQKTE 480
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ W TGDI +D+ G +VGR I GGEN+YP E+E HP + + V
Sbjct: 481 EAIGQDKWYHTGDIAVMDNQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQV 540
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + R+ E + AC+RL++ + ++E ++ C+ K ++ FK P
Sbjct: 541 VGVKDDRMGEEICACIRLKKGEK----------------TTAEEIKAFCKGK-ISHFKIP 583
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
R +V++ +PLT +GKI++ ++R+++ HL
Sbjct: 584 R-YVVFVTNYPLTVSGKIQKFKLRQQMEQHL 613
>gi|350530832|ref|ZP_08909773.1| long-chain-fatty-acid--CoA ligase [Vibrio rotiferianus DAT722]
Length = 521
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 158/326 (48%), Gaps = 49/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK
Sbjct: 226 ASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKH 283
Query: 62 IL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
L +GG +P E++++ F + ++ YG++ET+ TF +
Sbjct: 284 SLRLGVSGGASMPVEVIRQFEQRF-ELPVLEGYGLSETAPVATFNHID------------ 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G+ P SV QP V K A ++K +G + + VM Y+ +P
Sbjct: 331 --GDRLPGSVGQPLCGYVIKIA---DVKGHGQAIGELGEVCIKSPSVMKGYY----GRPE 381
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + +
Sbjct: 382 ATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMV 441
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG + RL E V A V L + +++C S+VL CRE+ L +K
Sbjct: 442 AVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------KSDVLIAWCREQ-LADYK 484
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V RK P+T+TGKI + E+
Sbjct: 485 YPRR-VFIRKALPMTATGKILKRELH 509
>gi|218782705|ref|YP_002434023.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218764089|gb|ACL06555.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 516
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 50/333 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
A GA + +PKF+ L A+E++ ++ VP + LI D SV
Sbjct: 226 AQFYAGATGILMPKFDPMETLAAIEKYGISYFGGVPT----MYRLIFKNADVTAHDLSSV 281
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G EL+++ + +FP ++++++GM+ET+ TF T DP
Sbjct: 282 RLAVLSGEPSSQELVQQVSQAFPNGRIVASFGMSETAGFFTFTTPDDP------------ 329
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLA 174
P + +G KPAP E+K+ G+ VG + RG V+ Y D
Sbjct: 330 ----PERAEKTEG----KPAPGFEMKIVDLHGADLPVGEVGEMFVRGDSVINGYMDPEDD 381
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K +V G+ W+ TGD+G +D+ G + +GR SGG NVYP+E+EA L +PG+
Sbjct: 382 K-NVFMGDGWMATGDLGRLDEQGYLIFMGRIKEMYISGGYNVYPQEIEAFLNAYPGVNTS 440
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+ + E+ VA V E D L E L+ HC+ K+L +K
Sbjct: 441 AVMETPDEVWGEIGVAFV-------IPEPGVD---------LDIEALKAHCK-KHLADYK 483
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR F++ P + GK+ + E+++ + +L
Sbjct: 484 RPRKFIVTDD-VPRSLIGKVVKKELKKNLDKYL 515
>gi|397493192|ref|XP_003817496.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Pan paniscus]
Length = 615
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 320 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|397493194|ref|XP_003817497.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan paniscus]
Length = 602
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 307 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 361
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 362 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 402
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 403 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 461
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 462 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 564
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 565 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 600
>gi|320449640|ref|YP_004201736.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
gi|320149809|gb|ADW21187.1| long-chain-fatty-acid--CoA ligase [Thermus scotoductus SA-01]
Length = 548
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 50/332 (15%)
Query: 1 MAMLMVGACH-VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M + ++GA V +P+ E K +EA+E+H VT VP + ++K + S+
Sbjct: 258 MNLALLGAAKLVLLPRPEIKPIVEAIEKHRVTLFPGVPTLYVAFNNFPGIEK--RNLRSI 315
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++G LP E+ + AKL+ YG+TE S P
Sbjct: 316 RACISGSAPLPLEV-ADRFERLTGAKLVEGYGLTEAS----------PVTHC-------- 356
Query: 120 GNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFL 173
N +H + + VG P P VE KV + VG ++ +G ++M YW++
Sbjct: 357 -----NPLHGVRKLGSVGLPFPGVEAKVVDEEGKEVPMGEVGELVVKGPNIMKGYWNR-P 410
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + + WL TGD+ +D G ++V R+ I +GG N+YP EVE VL QH +
Sbjct: 411 EETQKALKDGWLFTGDMARMDQDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQE 470
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + E V A + L+E ++ + D + CR+ NL +
Sbjct: 471 AAVVGVPDPYRGETVAAFIVLKEGYKGKVTEKD--------------IEAFCRQ-NLAAY 515
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
K PR+ + +R P TS GKI + E+ +E+ +
Sbjct: 516 KVPRI-IEFRDSLPKTSVGKILKRELTKEIAA 546
>gi|395005400|ref|ZP_10389282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394316643|gb|EJE53356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 564
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 150/331 (45%), Gaps = 48/331 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA V+ FE S L AV+ T+L VP + +A L + ++
Sbjct: 263 LAALTHGATIVYPNDAFEPVSVLRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTL 320
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK + ++ AYGMTETS + T +TP
Sbjct: 321 RTGVMAGSPCPIEVMKRVVSEMHMGEVTIAYGMTETSPASC-----QSTTDTP------- 368
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFL 173
+ + +GK PH+ELKV + S VG + TRG VM YW+
Sbjct: 369 --------LEKRVSTIGKVLPHLELKVIAPESGEILPVGAVGELCTRGYSVMRGYWEDAA 420
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
E W+ +GD+ +ID G V + GR + GGENVYP EVE L +H I
Sbjct: 421 KTSEAIDAEGWMHSGDLATIDGNGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHSAIQD 480
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ + + E + A V LR+ SE LR CR + + +
Sbjct: 481 VQVIGVPDQKYGEELCAWVVLRDGATLSEDE----------------LRSFCRGQ-IAHY 523
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
K PR ++ + + FP+T TGKI++ V RE+M
Sbjct: 524 KIPR-YIRFVESFPMTVTGKIQK-FVMREMM 552
>gi|418472696|ref|ZP_13042408.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
gi|371546689|gb|EHN75137.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
Length = 536
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 144/321 (44%), Gaps = 46/321 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + LEAV++ TSL VP + +A L S++ +
Sbjct: 249 GACIVIPAPSFDPVATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE--------------- 350
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 351 --HRTG--TVGRVLPHIEVKVVDPVTGVTVPRGAAGELRTRGYSVMLGYWEEPGKTAEAI 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP EVE L HP I + VVG+
Sbjct: 407 DPGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V+ACV R++ L+ E LR +C + L +K P
Sbjct: 467 PHERYGEEVLACVVPRDAAD---------------PLTLEELRAYC-DGQLAHYKVPSRL 510
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
L FP+T +GK+R+ E+R
Sbjct: 511 QLVDS-FPMTVSGKVRKVELR 530
>gi|332262429|ref|XP_003280265.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Nomascus leucogenys]
Length = 721
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D+
Sbjct: 426 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFMDILN----QPDFSSYDTS 481
Query: 60 KKI--LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+ G P EL++ N L+ AYG TE S P
Sbjct: 482 TMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------PV 522
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 523 TFANFPEDTVEQ-KAESVGRVMPHTEARIMNMEAGTLAELNTPGELCIRGYCVMLGYWGE 581
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGD+ ++++ G +VGR I GGEN+YP E+E HP +
Sbjct: 582 PQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKV 641
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL++ + + E ++ C+ K ++
Sbjct: 642 QEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-VS 684
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 685 HFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 719
>gi|114669318|ref|XP_001169992.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Pan troglodytes]
gi|410209622|gb|JAA02030.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410249930|gb|JAA12932.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410297578|gb|JAA27389.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
gi|410331767|gb|JAA34830.1| acyl-CoA synthetase family member 2 [Pan troglodytes]
Length = 615
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 320 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|229489261|ref|ZP_04383127.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229324765|gb|EEN90520.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 510
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 158/331 (47%), Gaps = 57/331 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A ++G VF+ +F LEAV++H T++ VP ++ L + KT SV+
Sbjct: 219 LAQSLMGGTQVFLSRFSPGVFLEAVDRHRPTTVGLVPTMLQMLIS--HENKTSYDLTSVR 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQA 118
+ G + L+ + + FP + YGMTET+ +++ P LE G+L ++
Sbjct: 277 VLRYGASPISPTLLGQVMHMFPNSAFAQGYGMTETA----HISVLSPADHLEG-GELLRS 331
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFL 173
G + P H E+++ + +G I+T G+H+ML YW+
Sbjct: 332 AGRILP----------------HCEVRIVDPAGTELPPGEIGEIVTFGSHIMLGYWN--- 372
Query: 174 AKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP+ T EV W+ TGD G +D+ G +++V R I +GGENVY EVE L +H
Sbjct: 373 -KPT-ETAEVLRDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARHE 430
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ V+G+ ++R E V A V LR +ES D ++ LR H +
Sbjct: 431 SVAACSVIGLPDSRWGERVHAVVVLR-----AESTVD-----------ADALRAHVKTL- 473
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ G+K PR F + P+ GK+ + ++R
Sbjct: 474 IAGYKVPRTF-QFVDALPVNGAGKVLKRDLR 503
>gi|226362388|ref|YP_002780166.1| fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226240873|dbj|BAH51221.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 491
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 147/327 (44%), Gaps = 49/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA +V + KF + LEA +++ TS VP + +A L+ +++++
Sbjct: 206 LVKGAPNVIVSKFSPAAFLEAAQKYRATSTFMVPTM---IAMLLENPAAATADLALERLC 262
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG + + +++ YG E ++T + P TP +L A
Sbjct: 263 YGGAPIATSVLQRGIVILGPV-FAQLYGQAEAPLAITCL---QPWEHTPERLTSA----- 313
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
GKP VE++V S G VG +LTRG H M RYW + A
Sbjct: 314 ------------GKPYTFVEVQVRSTDGTVLGPGEVGEVLTRGPHTMSRYWRRPDATAET 361
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG D+ G + L+ RR+ I SGG NVYP EVE LL HP ++ VVG
Sbjct: 362 IEPDGWLHTGDIGRWDEDGYLHLLDRRHDVIISGGFNVYPREVEDALLTHPAVVEAAVVG 421
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V R ++ E+L + C ++ L GFK PR
Sbjct: 422 LPDEKWGERVAAAVVTR-----------SAAAPDEIL-------EFCSDR-LAGFKRPRS 462
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+W P + GK R EVR +++
Sbjct: 463 LEIWPN-IPTSPVGKSLRREVRDRMVA 488
>gi|308179067|ref|YP_003918473.1| fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
gi|307746530|emb|CBT77502.1| putative fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 147/323 (45%), Gaps = 51/323 (15%)
Query: 14 PKFESKSALEAV-EQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F++++ L V E+HC T L VP + + +K D +++ + G P
Sbjct: 255 PGFDAETTLRVVAEEHC-TGLYGVPTMFIAMQN----HPNFKDYDLSALRTGIMAGSICP 309
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+M+ + + AYGMTETS ++ T D LE
Sbjct: 310 VEVMRRCVEEMGMSAVSIAYGMTETSP-VSCQTRSDDDLER------------------- 349
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ +G+ PHVE+KV S G TRG VML YW+ + E W
Sbjct: 350 RTSTIGRVHPHVEIKVVDPVSGETLERGETGEYCTRGYSVMLGYWNDEEKTRAAIDDEGW 409
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGD+ + + G +VGR + GGEN+YP E+E L +HP I + V+G+ +++
Sbjct: 410 MHTGDLAVMREDGYCTIVGRIKDMVIRGGENIYPAEIEEFLYKHPDIEDVSVIGVPDSKF 469
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E+V AC+R++ Q L+ + +R++ L +K P +V +
Sbjct: 470 GEVVCACIRMKAGRQ---------------PLTVDAIREYS-AGQLAHYKVP-AYVRILE 512
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
FP T TGKIR++++R + L
Sbjct: 513 EFPTTVTGKIRKNQLREDAARSL 535
>gi|326331582|ref|ZP_08197872.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
gi|325950838|gb|EGD42888.1| substrate--CoA ligase [Nocardioidaceae bacterium Broad-1]
Length = 542
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 144/320 (45%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++ L+ V+ T+L VP + +A + +++ + G P E+
Sbjct: 260 PGFDPRTTLQTVQDEKCTALYGVPTMF--IAMQDDPEFASFDLSTLRTGIMAGALCPIEV 317
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + +++ AYGMTETS ++ T D LE +
Sbjct: 318 MKRCVSEMHMSEVAIAYGMTETSP-VSCQTRTDDDLERRTE------------------- 357
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ APHVE+K+ + V G TRG VML YWD + W+ T
Sbjct: 358 TIGRAAPHVEIKIVDPATGAVVPRGTAGEFCTRGYSVMLGYWDDDTKTAEAIDADGWMHT 417
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G +VGR + GGEN+YP E+E L HP I VVG+ + R E
Sbjct: 418 GDLAVMREDGYCVVVGRIKDMVIRGGENIYPREIEEFLFTHPDIAEAQVVGVPDERYGEE 477
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R+R + L + +R K L +K+PR +VL FP
Sbjct: 478 LCAWIRMRPGAE---------------PLDAAAVRAFADGK-LAHYKSPR-YVLIVDEFP 520
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ ++R + ++ L
Sbjct: 521 MTVTGKVRKIDMREQSVALL 540
>gi|332848510|ref|XP_003315662.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 602
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 307 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 361
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 362 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 402
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 403 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 461
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 462 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 564
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 565 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 600
>gi|421521513|ref|ZP_15968167.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|402754665|gb|EJX15145.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 557
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV ++G++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE E LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAVSE----------------EALREWARAR-IAHFKVPRYF-RFVDAFPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + L +
Sbjct: 538 TGKVQKFRMREISVEELSA 556
>gi|374607457|ref|ZP_09680258.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555293|gb|EHP81863.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 518
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 143/328 (43%), Gaps = 47/328 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +GA + +P+ + ++ L +EQH VT+ P I L + +++K
Sbjct: 229 IYLGATSIILPRPDPEAVLRGIEQHQVTNYFAPPTIWISLLRSPLFDQV--DLSTLRKGY 286
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P+E++ E P+ +L + YG TE + L A G
Sbjct: 287 YGASAMPTEILHEIRERLPELQLWNFYGQTEMAP-----------------LASALGPTE 329
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
Q G+PA +VE + D ++ V G I RG H+ML Y D
Sbjct: 330 ----QQDHAGAAGRPAVNVETVILDDTNTQVSPGTVGEIAHRGPHLMLGYLDDPEKTAEA 385
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W +GD+G D+ G + +V R+ IK+GGENV EVE L QHPG+ + V G
Sbjct: 386 FLGG-WFHSGDLGYYDEHGLLHVVDRKKDMIKTGGENVASREVEEALYQHPGVQEVAVFG 444
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ ++ E VV+ V R ++L + L HCR + L GFK P+
Sbjct: 445 LPHSTWVETVVSAVITRAG----------------VVLDEDELIGHCRAR-LAGFKTPKQ 487
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSH 326
V + + P +GK+ + E+R H
Sbjct: 488 -VFFVESLPKNPSGKLLKRELRLRFAGH 514
>gi|126437383|ref|YP_001073074.1| AMP-binding domain-containing protein [Mycobacterium sp. JLS]
gi|126237183|gb|ABO00584.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 540
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 142/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++ L A+E+ T + VP + +A L S++ + G P E+
Sbjct: 255 PGFDAGLTLAAIEKERCTGVYGVPTMF--IAMLGHPDFPGTDLSSLRTGIMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK N ++ AYGMTETS ++ TL D L+ +
Sbjct: 313 MKRCINEMHMTEVAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + G TRG VML YW+ + W+ T
Sbjct: 353 TIGRAHPHVEVKIVDPDTGETVERGEPGEFCTRGYSVMLGYWNDPDKTAQAIDADGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G +VGR + GGEN+YP EVE L HP I V+G+ + + E
Sbjct: 413 GDLAVMRDDGYCNVVGRIKDMVIRGGENIYPREVEEFLHTHPDIDDAQVIGVPDDKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R+R L++E +R+ R+K L +K PR +V FP
Sbjct: 473 ICAWIRMRPG---------------RPPLTAEAVREFARDK-LAHYKIPR-YVHVVDEFP 515
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ ++R E + L
Sbjct: 516 MTVTGKVRKVDMRAETVRLL 535
>gi|444309582|ref|ZP_21145217.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
gi|443487034|gb|ELT49801.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium M86]
Length = 504
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 48/335 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + G+C V IP F+ L+ VE+ T L VP + +A L + S
Sbjct: 204 LACVTHGSCMV-IPNDSFDPFLTLQTVEEEQCTGLHGVPTMF--IAMLDHPDSSRFDLSS 260
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + + ++ A G TETS P +
Sbjct: 261 LRTGIMAGSPCPIEVMRRVVSEMHQGEITIACGKTETS-------------------PVS 301
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFL 173
F + T + + + + VG+ PH+E+K+ +DG G +LTRG VM YW+
Sbjct: 302 FQSSTADPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAE 360
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I
Sbjct: 361 SSAGAIDDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISD 420
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ + GI + + E++ A V+L + Q SE E L ++CR++ + +
Sbjct: 421 VQIFGIPDRKFGEIICAWVKLHKDAQLSE----------------EDLSEYCRQR-IAHY 463
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P + + FP+T TGKI++ +R+ ++ L+
Sbjct: 464 KVPA-HIRFVDQFPMTVTGKIQKFVMRQAMIEELE 497
>gi|156151445|ref|NP_079425.3| acyl-CoA synthetase family member 2, mitochondrial precursor [Homo
sapiens]
gi|166198367|sp|Q96CM8.2|ACSF2_HUMAN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|10436885|dbj|BAB14930.1| unnamed protein product [Homo sapiens]
gi|15082296|gb|AAH12053.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
gi|37182442|gb|AAQ89023.1| AVYV493 [Homo sapiens]
gi|119615018|gb|EAW94612.1| hypothetical protein FLJ20920 [Homo sapiens]
Length = 615
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 320 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|397493198|ref|XP_003817499.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Pan paniscus]
Length = 640
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 345 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 399
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 400 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 440
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 441 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 499
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 500 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 602
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 603 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 638
>gi|15559516|gb|AAH14123.1| Acyl-CoA synthetase family member 2 [Homo sapiens]
Length = 615
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 320 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|226187497|dbj|BAH35601.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 42/321 (13%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+ G+ HV + F + +E + + VT + VP ++ + L +T DS+ I
Sbjct: 223 VTGSVHVLMGDFTVEKLVETIAEKEVTQSLLVPTMVQTM--LEYADRTGLPIDSLTSITY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G +P L++ P +L YGMTE + + T + D
Sbjct: 281 GASPMPEPLVRRLIERSPDLRLRQGYGMTELAPAATLLRDDDHR---------------- 324
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
N H + VG+ APH E+++ + +G ++ RG++VM+ YW+ A+ + +
Sbjct: 325 NPDHPERLRSVGRAAPHTEVRIVDATGTELPRGDIGEVVVRGSNVMMGYWNNE-AETAHA 383
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+G +D+ G V+LV R I SGGENVY EVEA L QHPG+ V+G+
Sbjct: 384 VRSGWMHTGDLGFMDEHGYVFLVDRLKDMIISGGENVYSAEVEAALSQHPGVSSCAVIGV 443
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A V + E+N S + LR E+ + +KAPR
Sbjct: 444 PDDKWGERVHAVV-----VRTPENNS-----------SGDELRDFVGER-IARYKAPR-S 485
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
V + PL+ GKI + +R
Sbjct: 486 VDFVDALPLSPVGKILKRTLR 506
>gi|426347594|ref|XP_004041434.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Gorilla gorilla gorilla]
Length = 652
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D +
Sbjct: 357 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-I 411
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 412 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 452
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 453 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 511
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 512 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 571
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 572 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 614
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 615 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 650
>gi|126436245|ref|YP_001071936.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. JLS]
gi|126236045|gb|ABN99445.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 483
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 141/320 (44%), Gaps = 46/320 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V +P F+ ++ + +T L P + L ++ K R V
Sbjct: 210 IASFIRGATMVPVPVFDVDRVVDLIAAERITMLPGPPTLYHSLLSVADKSKLATLRAGV- 268
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
G +P EL++ P L + YG+TE ++ TL PG +F
Sbjct: 269 ---TGAADIPVELVRRVLEELPFQTLATGYGLTEAGTA---------TLSRPGD---SFA 313
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ VG VE+++ DG +L RG VM Y D A
Sbjct: 314 DIA---------TTVGTACDGVEVRIADDGE-----VLVRGYSVMQGYLDDPAATAEAID 359
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
WL TGD+G++DD G + +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 360 PHGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPDVAQAAVIGVP 419
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R+ ++ A V RE LS+E L RE+ + GFK PR +V
Sbjct: 420 DERMGQVGKAFVVRREGHAEP--------------LSAEGLIAWSRER-MAGFKVPR-YV 463
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ PL +TGK+ +D++R
Sbjct: 464 EFLDELPLNATGKVMKDQLR 483
>gi|116671612|ref|YP_832545.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
gi|116611721|gb|ABK04445.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
Length = 558
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +ALEAV+ TSL VP + +A L +++ + G P E+M
Sbjct: 278 FTPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMN 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT D TL Q + V
Sbjct: 336 RVISDMNMKDVAICYGMTETSPVST-MTRADDTL-------------------QQRTETV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ P +E +V + V G + TRG VM YW+Q + W+ TGD
Sbjct: 376 GRTMPQLESQVVDPATGEVLERGEIGELCTRGYAVMKGYWNQPDKTAEAIDPDGWMHTGD 435
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G V + GR + GGEN+YP E+E L HP I + V+G+ +A+ E ++
Sbjct: 436 LARMDADGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDAKYGEELM 495
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ ++ L + + + CR K L +K PR +V R FP+T
Sbjct: 496 ACIIVKPGAD---------------PLDAADVAEFCRGK-LAHYKIPR-YVEVRDSFPMT 538
Query: 310 STGKIRRDEVRREVMSHL 327
+GKIR+ E+R+E ++ L
Sbjct: 539 VSGKIRKVEMRQEAVARL 556
>gi|84502505|ref|ZP_01000641.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
gi|84389317|gb|EAQ02114.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
Length = 517
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 146/330 (44%), Gaps = 50/330 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
AM + C VF+ F+ ++ +E VT LI VP ++ +I +K + D S
Sbjct: 221 FAMTLGAGCCVFMRAFDPLEVMQTIESRGVTHLILVPTMI----RMIIDRKDLEDYDLSS 276
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+K + G + + E P L +YG TE S ++ + + + G+
Sbjct: 277 IKVLSYGASPMTEGQIAETLEKLPGVNLQQSYGQTELSPYISKLAMEQHVSDANGE---- 332
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFL 173
+ VG E+ + D VG IL RG H M YW
Sbjct: 333 -----------ARLTSVGHAGIMAEVIIADDDLREMPRREVGEILVRGPHTMTGYW---- 377
Query: 174 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
KP + + W+ TGD+G +D+ G +++V R+ I +GGENVY EVE L HP
Sbjct: 378 RKPDETAATLVNGWVRTGDVGWMDEEGFIYIVDRKKDMIVTGGENVYSSEVENALSAHPA 437
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ VV+GI + R E V A + R+ ++++ KEL+ +HCR + +
Sbjct: 438 VAIAVVIGIPDDRWGEAVHAIIVCRD---------ERTATEKELI-------EHCRSR-I 480
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+K PR PL++ GKI + ++R
Sbjct: 481 AGYKCPRSVEFRSDALPLSAAGKILKRDLR 510
>gi|91975613|ref|YP_568272.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
gi|91682069|gb|ABE38371.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 518
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 141/325 (43%), Gaps = 47/325 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
++G HV IP+F LEA+ +H VT VP ++ + L + S+K I
Sbjct: 222 IMGGRHVVIPRFAPTEVLEAISRHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITY 279
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G +P +++E FP K +YGMTE S T + D LP A P
Sbjct: 280 GASPMPEAVLQECLRRFPSIKFGQSYGMTELSPVATILAPDD-------HLPSA-----P 327
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ G+P E+KV VG I+ RG VM+ YW KP ++
Sbjct: 328 RRRLR----SAGRPIVSAEVKVVDAEDRELKRGEVGEIVVRGPMVMMGYWR----KPELT 379
Query: 180 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ W+ TGD GS D G +++ R I SGGENVY EVE +L HP ++ V
Sbjct: 380 AEALRGGWMHTGDSGSFDADGYLYISDRIKDMIISGGENVYSIEVENAVLTHPEVMQCAV 439
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+GI + + E V A V R LS+E L CR + +K+P
Sbjct: 440 IGIPHPKWGEAVHAVVVRRPGSS----------------LSAEELIAFCRSA-IADYKSP 482
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRR 321
R P PL+S K+ + +R+
Sbjct: 483 RSVEFRDDPLPLSSVNKVNKAALRQ 507
>gi|94309555|ref|YP_582765.1| AMP-binding domain protein [Cupriavidus metallidurans CH34]
gi|93353407|gb|ABF07496.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
metallidurans CH34]
Length = 570
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 49/338 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F + + AV + T+L VP + +A L + S+
Sbjct: 272 LACVSTGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLDDPDFSKYDFSSL 329
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK A++ AYGMTETS P +F
Sbjct: 330 RTGIMAGAPCPVEVMKRVMADMHLAEITIAYGMTETS-------------------PVSF 370
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWD-QFL 173
+ T + + + + VG+ PH+E KV DG + G + TRG VML YWD +
Sbjct: 371 QSATDDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEER 429
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP +
Sbjct: 430 TREAIRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQS 487
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ QS+ ++E +R +CR++ + +
Sbjct: 488 VQVFGVPDEKYGEEVCAWIVLKPG---------QSATDEE-------IRNYCRDQ-IAHY 530
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
K PR ++ + P+T TGK+++ +R ++ L P
Sbjct: 531 KIPR-YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|410611684|ref|ZP_11322777.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
gi|410168723|dbj|GAC36666.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
Length = 519
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 149/325 (45%), Gaps = 40/325 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A+ + HV IP F L A+E+H + ++ VP ++ + ++ +T S+++
Sbjct: 219 AVTFMAGTHVVIPMFTPDGTLAAIEKHKPSQVLLVPVMLQMVMQSDKLAQT--DVSSLRQ 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAF 119
I G + ++ +A FP I A+G TE S + ++ LE P G+L
Sbjct: 277 IAYGASPITQSVLVDAFKKFPNTSFIQAFGQTELSPIASVLSEEYHVLEGPKAGKL---- 332
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
S +P VC + V+ + VG+I +G ML YW+ KP V+
Sbjct: 333 -----RSAGRPTRVCEVRI---VDANMLEVPRGDVGQITVKGPTTMLGYWN----KPEVT 380
Query: 180 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ W+ TGD G +D+ G ++L+ R I SGGENVY EVE + QHP + V
Sbjct: 381 AETIRDGWVLTGDAGYMDEDGFIFLMDRVKDMIVSGGENVYSAEVENAIGQHPAVATSAV 440
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+GI + + E V A V L + ++++ L+ HC + G+K P
Sbjct: 441 IGIPSEQWGESVHALVILHPGIE----------------VTAQALQSHCHTL-IAGYKCP 483
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRR 321
+PFPL+ K+ + E+R+
Sbjct: 484 HSIEFTTEPFPLSGANKVLKTELRK 508
>gi|344173641|emb|CCA88810.1| long-chain-fatty-acid-CoA ligase [Ralstonia syzygii R24]
Length = 571
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 55/338 (16%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC VF + F+ + L V + T+L VP + + ++ GR V
Sbjct: 272 LACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDV 326
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P E+MK ++ AYGMTETS P
Sbjct: 327 SSLRGGIMAGSPCPIEVMKRVVAEMSLCEITIAYGMTETS-------------------P 367
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
+F + + + + + VG+ PH+E+K+ DG+ V G + T+G VML YWD
Sbjct: 368 VSFQSAVTDPLDK-RVTTVGRIQPHLEVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWD 425
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP
Sbjct: 426 D-EAKTAESIRDGWMRTGDLATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPK 484
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + V G+ + + E V A + L+ Q +E E +R+ C+++ +
Sbjct: 485 VQAVNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIREFCKDQ-I 527
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 528 AHYKIPR-YIRFVTEMPMTVTGKVQKFVMRERMIEALK 564
>gi|332848513|ref|XP_003315663.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial [Pan
troglodytes]
Length = 640
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D V
Sbjct: 345 MMCLMYGATLILASPIFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-V 399
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 400 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 440
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 441 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 499
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 500 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 602
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 603 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 638
>gi|262275654|ref|ZP_06053463.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
gi|262219462|gb|EEY70778.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
Length = 980
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 153/331 (46%), Gaps = 53/331 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++VGA V +P+FE + L+ ++ H V+ VP + + +R D +K
Sbjct: 689 ACILVGASMVLVPRFEPGAVLQLMKDHRVSVFAGVPTMYIGILNYLRDNDV--SLDGIKG 746
Query: 62 IL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+L +GG LP ++ + +F L+ YG++ETS +F + L PG
Sbjct: 747 VLKMAMSGGSSLPVAILTQFDETF-NVPLLEGYGLSETSPIASFNHVDSDRL--PG---- 799
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVC-----SDGSSHVGRILTRGAHVMLRYWDQF 172
VG+P VE+KV + +G I RG +VM Y+++
Sbjct: 800 ----------------SVGQPVTGVEMKVVDVERNTVAVGELGEIAIRGPNVMRGYYNRP 843
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A V + W +GDIG D+ N ++V R+ I GG NVYP E+E VL++H +
Sbjct: 844 EATDEVLDIDGWFFSGDIGRRDERNNYFIVDRKKELIIRGGMNVYPREIEEVLIRHEKVA 903
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+A+ E V A V + + ++ L +C+ + L
Sbjct: 904 MVAVLGVADDTYGEEVKAYVVAHDGFD-----------------DADALIAYCKSQ-LAD 945
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 323
+K PR + +R P+T+TGK+ + E++ EV
Sbjct: 946 YKYPR-HIEFRAQLPMTATGKLLKRELKAEV 975
>gi|430806585|ref|ZP_19433700.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
gi|429501182|gb|EKZ99525.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
Length = 570
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 49/338 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F + + AV + T+L VP + +A L + S+
Sbjct: 272 LACVSTGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLDDPDFSKYDFSSL 329
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK A++ AYGMTETS P +F
Sbjct: 330 RTGIMAGAPCPVEVMKRVMADMHLAEITIAYGMTETS-------------------PVSF 370
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWD-QFL 173
+ T + + + + VG+ PH+E KV DG + G + TRG VML YWD +
Sbjct: 371 QSATDDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGYSVMLGYWDDEER 429
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP +
Sbjct: 430 TREAIRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQS 487
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ QS+ ++E +R +CR++ + +
Sbjct: 488 VQVFGVPDEKYGEEVCAWIVLKPG---------QSATDEE-------IRNYCRDQ-IAHY 530
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
K PR ++ + P+T TGK+++ +R ++ L P
Sbjct: 531 KIPR-YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|126179036|ref|YP_001047001.1| AMP-dependent synthetase/ligase [Methanoculleus marisnigri JR1]
gi|125861830|gb|ABN57019.1| AMP-dependent synthetase and ligase [Methanoculleus marisnigri JR1]
Length = 566
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 151/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA + GA V P F ++ L+AV+ T+L VP + +A L D++
Sbjct: 262 MASVTHGAAMVLPAPVFSPEAVLKAVQDEKCTALHGVPTMF--IAELSHPDFAKYRLDTL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P+E+M+E ++++ YG TETS +T T DP
Sbjct: 320 RTGIMAGSPCPTEVMREVNKKMNMSEIVIVYGQTETSPGVTMTTTADPL----------- 368
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ + +GKP PH E+K+ + + G I RG VM Y++
Sbjct: 369 ---------ERRVSTIGKPFPHTEIKIIDPNTQRIVPRGETGEICARGYCVMRCYYNNPN 419
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A + W TGD+G++D+ V +VGR + GGEN+YP E+E L HP +
Sbjct: 420 ATRATIDESHWNHTGDLGTMDEEDYVKIVGRLKDMVIRGGENIYPREIEEYLHNHPKVAD 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + + E ++A ++ + N L EV ++ CR + + F
Sbjct: 480 AYVIGVPDRKYGEELMAWIK---------------TDNGATLTEDEV-KEFCRGR-IAHF 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + FP+T +GKI + ++R + L
Sbjct: 523 KIPR-YVKFVDDFPMTVSGKIMKFKMREMAIEEL 555
>gi|73541161|ref|YP_295681.1| AMP-binding protein [Ralstonia eutropha JMP134]
gi|72118574|gb|AAZ60837.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 578
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GAC VF + FE + + AV + T+L VP + +A L + + ++
Sbjct: 279 LACVSTGACMVFPGEAFEPVATMSAVSEERCTALHGVPTMF--IAQLDHPEFSRFDFSTL 336
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK A++ AYGMTETS P +F
Sbjct: 337 RTGIMAGSPCPIEVMKRVVADMHMAEVTIAYGMTETS-------------------PVSF 377
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ T + + + + VG+ PH+E KV D + + G + TRG VML YWD
Sbjct: 378 QSSTNDPLDK-RVSTVGRVQPHLECKVV-DATGQIVPVGETGELCTRGYSVMLGYWDD-E 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A+ S + + W+ TGD+ +ID G +VGR + GGENVYP E+E L +HP +
Sbjct: 435 ARTSEAIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQA 494
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E + A V L+ Q++ E +R CR++ + +
Sbjct: 495 VQVFGVPDQKYGEEICAWVVLKPG---------QTATEDE-------IRAFCRDQ-IAHY 537
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR ++ + P+T TGK+++ +R + L
Sbjct: 538 KIPR-YIRFVDEMPMTITGKVQKFVMRERMTKELN 571
>gi|407685098|ref|YP_006800272.1| AMP-binding protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246709|gb|AFT75895.1| AMP-binding domain protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 579
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF F+ ++ L VE+ T L VP + L K ++
Sbjct: 278 LVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + V G I RG VM YW +
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + + E V ++ +E+ E DQ +R + + K L FK
Sbjct: 496 AVFGIPDNKYGEQVCLWIKAKENRHIDE---DQ-------------IRDYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ K +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YISVVKEYPMTVTGKLQKFKMREYMIETLK 571
>gi|389574151|ref|ZP_10164220.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
gi|388426340|gb|EIL84156.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
Length = 545
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L G + + F + L+ VE+ T L VP + +A L +++
Sbjct: 251 LACLTKGGTIIPLESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHSYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 309 TGIMAGSLCPSHVMKAVIEKMGLKELTIAYGQTESSPVIT-QTRTDDSFERRVQ------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
VG+ P +E+K+ G+S G + TRG HVM Y+ A
Sbjct: 362 -------------TVGRALPQIEVKITLPGTSEEVPRGQQGELCTRGYHVMKGYYKNEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D G V + GR I GGENVYP+E+E VL HP I+
Sbjct: 409 TNEVIDEDGWLHTGDLAEMDHDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDA 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + E A +RL++ +S E L +C+ + + +K
Sbjct: 469 QVVGIPDETYGEEAAAFIRLKQGKS----------------VSIETLTSYCQSQ-MARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ F + + +P+T++GKI++ ++++ + +K
Sbjct: 512 IPKYFFITDE-YPMTASGKIQKFRLKKQALDLIK 544
>gi|383825038|ref|ZP_09980193.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
gi|383335754|gb|EID14178.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
Length = 496
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 59/325 (18%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
G V +P+F+ K+ +E + H T VP + L++ +++ ++GG
Sbjct: 219 GGTLVLVPRFDPKTVIEELALHRCTIFSGVPTMYF---ALLQADTHGHDLSALRVGISGG 275
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P E+++ FP ++ YG++ET+S+ TF N+ S
Sbjct: 276 AAIPGEVIRAFEEKFPGVVILEGYGLSETASTTTF-------------------NI---S 313
Query: 127 VHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
Q + + +GKP V++ V + G +VG I+ RG +VM Y++ KP +
Sbjct: 314 AEQRKVLSIGKPIWGVQVSVVDENDHELPPGPDNVGEIVIRGHNVMKGYYN----KPE-A 368
Query: 180 TGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
T E W TGD+ D+ G ++V R+ + GG NVYP E+E VL H G+
Sbjct: 369 TAEAFRNGWFHTGDLAYRDEDGYFFIVDRKKDLVIRGGYNVYPREIEEVLFDHHGVAAAA 428
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G + +L + V+A V +E + L+SE L HC+E+ L +K
Sbjct: 429 VIGKPDEKLGQEVLAFVVAKEGVE----------------LTSEELIAHCKER-LAAYKY 471
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR + + P TGK+ + E+R
Sbjct: 472 PREIRIVDE-LPTGPTGKVLKKELR 495
>gi|194379790|dbj|BAG58247.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 307 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 361
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 362 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 402
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 403 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 461
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 462 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 521
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 522 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 564
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 565 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 600
>gi|317126641|ref|YP_004100753.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315590729|gb|ADU50026.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 502
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 148/326 (45%), Gaps = 57/326 (17%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
++ G IP+F+ ALE V + VT VP + A A L S++ +
Sbjct: 222 VLRGCTLTLIPRFDPAKALEVVGRDHVTIFQGVPTMYA--AMLNHPDADAAETSSLRTCV 279
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+GG LP +M+ F A+++ YG++ETS +F PT PG
Sbjct: 280 SGGSALPEAVMRNFEQKF-DAQILEGYGLSETSPVASFNMPDRPT--KPG---------- 326
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
+G+ P E+K+ + DG+ +G I RG +VM YW KP
Sbjct: 327 ----------TIGRAIPGCEMKLVNLDGTDTAPGEIGEIAIRGENVMKGYW----GKPEA 372
Query: 179 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + W TGD+ ++D+ G +V R+ I GG NVYP EVE VL HP ++
Sbjct: 373 TAEAIPDGWFRTGDLATVDEDGYFTIVDRKKDMIIRGGMNVYPREVEEVLYTHPDVLEAA 432
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVGI + + E + A V L+ SE+ D+ ++++ +E+ + +K
Sbjct: 433 VVGIPDDVMGEEIGAAVALKPG---SETTLDE-------------VQEYVKER-IAAYKY 475
Query: 296 PRLFVLWR-KPFPLTSTGKIRRDEVR 320
PR LWR P TGKI R EVR
Sbjct: 476 PRR--LWRLDELPKGPTGKILRREVR 499
>gi|108800621|ref|YP_640818.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MCS]
gi|119869760|ref|YP_939712.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. KMS]
gi|108771040|gb|ABG09762.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695849|gb|ABL92922.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 483
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 142/320 (44%), Gaps = 46/320 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V +P F+ ++ + +T L P + L ++ K R V
Sbjct: 210 IASFIRGATMVPVPVFDVDRVVDLIAAERITMLPGPPTLYHSLLSVADKSKLATLRAGV- 268
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
G +P EL++ P L + YG+TE ++ TL PG +F
Sbjct: 269 ---TGAADIPVELVRRVLEELPFQTLATGYGLTEAGTA---------TLSRPGD---SFA 313
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ VG VE+++ DG +L RG VM Y D A
Sbjct: 314 DIA---------TTVGTACDGVEVRIADDGE-----VLVRGYSVMQGYLDDPAATAEAID 359
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G++DD G + +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 360 PDGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPDVAQAAVIGVP 419
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R+ ++ A V R+ LS+E L RE+ + GFK PR +V
Sbjct: 420 DERMGQVGKAFVVRRDGHAGP--------------LSAEGLIAWSRER-MAGFKVPR-YV 463
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ PL +TGK+ +D++R
Sbjct: 464 EFLDELPLNATGKVMKDQLR 483
>gi|426237737|ref|XP_004012814.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Ovis aries]
Length = 455
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + + L P + D+ + + D
Sbjct: 160 MVSLMHGVTLILCSPVFEGKKTLEAISRERGSFLYGTPTMFVDVLN----QPDFSSYDIS 215
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 216 TIRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 256
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 257 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGE 315
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 316 PRKTEEAIGQDKWYRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 375
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 376 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 418
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 419 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 453
>gi|339326069|ref|YP_004685762.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338166226|gb|AEI77281.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
necator N-1]
Length = 574
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + FE ++ ++AV + T+L VP + +A L + S+
Sbjct: 275 LACVSSGAAMVFPGQAFEPEATMQAVSEERCTALHGVPTMF--IAQLDHPNFSQYDFSSL 332
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 333 RTGIMAGSPCPIETMKRVVSQMHMSEVTIAYGMTETS-------------------PVSF 373
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+++ + V G + TRG VML YWD A
Sbjct: 374 QSSTTDPLDK-RTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EA 431
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + + W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP + +
Sbjct: 432 RTAEAIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAV 491
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E V A + L+ +E +R CR++ + +K
Sbjct: 492 QVFGVPDQKYGEEVCAWIVLKPGASATEDE----------------IRDFCRDQ-IAHYK 534
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R + LK
Sbjct: 535 IPR-YIRFVDEMPMTITGKVQKFVMRERMTRDLK 567
>gi|398812778|ref|ZP_10571492.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398076492|gb|EJL67552.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 564
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 142/315 (45%), Gaps = 47/315 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE S L++V+ T+L VP + +A L + +++ + G P E+MK
Sbjct: 279 FEPVSVLQSVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGSPCPIEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS + T +TP + + +
Sbjct: 337 RVVSEMHMSEVTIAYGMTETSPASC-----QSTTDTP---------------LEKRVSTI 376
Query: 136 GKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+ELKV S VG + TRG VM YW + W+ +GD
Sbjct: 377 GKVLPHLELKVIDPISGEILPAGKVGELCTRGYSVMRGYWADAAKTAEAIDADAWMHSGD 436
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ID+ G V + GR + GGENVYP E+E L +HP I + V+G+ + + E +
Sbjct: 437 LAVIDEDGYVNIAGRIKDMVIRGGENVYPREIEEFLYRHPAIQDVQVIGVPDQKYGEELC 496
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V LR SE E LR C + + FK PR ++ + FP+T
Sbjct: 497 AWVVLRNGASLSE----------------EDLRAFC-QGQIAHFKVPR-YIRFVNGFPMT 538
Query: 310 STGKIRRDEVRREVM 324
TGKI++ V RE+M
Sbjct: 539 VTGKIQK-FVMREMM 552
>gi|170740558|ref|YP_001769213.1| AMP-binding domain-containing protein [Methylobacterium sp. 4-46]
gi|168194832|gb|ACA16779.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 565
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 150/334 (44%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ + L AVE T+L VP + LA L ++ S+
Sbjct: 265 LAAVTSGAAMVYPGEGFDPLATLRAVEAERCTALYGVPTMF--LAQLDHLEFARFDLSSL 322
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P +M+ A + +L YGMTETS ++F + D LE
Sbjct: 323 RTGIMAGSPCPIAVMQRAVDRMHLRELTICYGMTETSP-VSFQSAVDDPLER-------- 373
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ VG+ PH E+K+ D + G + TRG VM YWD
Sbjct: 374 -----------RVSTVGRIHPHTEVKIV-DAEGRIVPRGTPGELCTRGYSVMRGYWDDPE 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V W+ TGD+ ++DD G +VGR + GGENVYP EVE L +HP I
Sbjct: 422 KTAEVRDAAGWMHTGDLATLDDQGFCNIVGRIKDLVIRGGENVYPREVEEFLYRHPAIQE 481
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + R E + A V+LR L++E LR HC +
Sbjct: 482 VQVFGVPDPRYGEELCAWVKLRPG----------------ATLTAEELRAHC-GGQIAHQ 524
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + FP+T TGK+++ +R ++ L
Sbjct: 525 KIPR-YVEFVDAFPMTVTGKMQKYLMREAMIERL 557
>gi|398864574|ref|ZP_10620107.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398244873|gb|EJN30407.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 565
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 145/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+S
Sbjct: 544 TGKIQKFRMREISIEELRS 562
>gi|33772189|gb|AAQ54531.1| hypothetical protein [Malus x domestica]
Length = 78
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 62/78 (79%)
Query: 160 RGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 219
RG H+MLRYW SVS EVW DTGD+GS+DD GNVWL+GR NGRIKSGGEN+YPE
Sbjct: 1 RGQHMMLRYWHGSPPNESVSGNEVWFDTGDVGSVDDSGNVWLIGRANGRIKSGGENIYPE 60
Query: 220 EVEAVLLQHPGIIGIVVV 237
EVE LLQHPG+ G+VVV
Sbjct: 61 EVERTLLQHPGVTGVVVV 78
>gi|403070303|ref|ZP_10911635.1| long-chain fatty acid CoA ligase (AMP-binding) protein
[Oceanobacillus sp. Ndiop]
Length = 565
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
G+ + +PKF + L+A+E+ T P I L +KK S++ L+G
Sbjct: 276 GSKMILMPKFNTLDVLKAIEKQKPTLFPGAPTIYVGLLNHPDIKKY--DLSSIEACLSGS 333
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN-VTPN 125
LP E+ +E KL+ YG+TE+S P N V N
Sbjct: 334 APLPLEV-QEQFEEITGGKLVEGYGLTESS-------------------PVTHANFVWEN 373
Query: 126 SVHQPQGVCVGKPAPHVELKVC---SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
V+ +G P P + K+ SDG+ VG I +G +M YW+ +V
Sbjct: 374 RVNG----SIGVPWPDTDCKIFKMDSDGTEAEVGEVGEIAVKGPQIMQGYWNNKEETENV 429
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGD+G +D+ G ++V R+ I +GG N+YP EVE VL +H + VV G
Sbjct: 430 -LKDGWLFTGDLGYMDEEGYFFVVDRKKDMIIAGGYNIYPREVEEVLYEHEAVQEAVVAG 488
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + E V A + L+E + ++S EVL +CR+ L +K PR+
Sbjct: 489 IPDPYRGETVKAFIVLKEGF----------------MISEEVLNDYCRQA-LAAYKVPRI 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
+ +R P T+ GKI R ++ E L++
Sbjct: 532 YE-FRDELPKTAVGKILRRKLVDEETKKLEA 561
>gi|378715634|ref|YP_005280523.1| putative long-chain-fatty-acid-CoA ligase [Gordonia
polyisoprenivorans VH2]
gi|375750337|gb|AFA71157.1| putative long-chain-fatty-acid-CoA ligase [Gordonia
polyisoprenivorans VH2]
Length = 499
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 49/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ G V + KF ++ ++A +H T+ VP + ++ LI + + +++++
Sbjct: 209 LVKGGASVILEKFSPQNFIDAAVRHRATATFMVPTM---ISMLIEDAVIDRDQLALRRLC 265
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG + L+ YG E ++T + P TP +L A
Sbjct: 266 YGGAPIAPALLARGIEKLGPV-FAQLYGQAEAPLAITCLQ---PVEHTPDRLASA----- 316
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
GKP VE+ + S V G ++TRG H M YW + A
Sbjct: 317 ------------GKPYTFVEVDIVDAQGSPVPAGTAGEVVTRGPHTMKGYWQRPEATAET 364
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG +DD G ++L+ RR+ I SGG NVYP EVE LL+HP + VVG
Sbjct: 365 LGPDGWLRTGDIGQVDDSGFLYLLDRRHDVIISGGFNVYPREVEDALLEHPAVREAAVVG 424
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + + + V A V +R+ +S++ + +HC + L GFK PR
Sbjct: 425 IDDPKWGQRVAAAVVVRDP------------------VSADEIHEHCTTR-LAGFKRPRH 465
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
W + P + GK R VR + S
Sbjct: 466 IEFWDE-LPKSPVGKSLRRAVRDTMHS 491
>gi|397694374|ref|YP_006532255.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|298682215|gb|ADI95281.1| putative acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|397331104|gb|AFO47463.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
Length = 557
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVVQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV ++G++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE E LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAVSE----------------EALREWARAR-IAHFKVPRYF-RFVDAFPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + L +
Sbjct: 538 TGKVQKFRMREISVEELSA 556
>gi|218563680|ref|NP_001038884.2| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
gi|218749805|ref|NP_001132910.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Danio
rerio]
Length = 606
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
++ ++ L A+E+ T + P + D+ + K SV+ + G P E+M+
Sbjct: 327 YDGRANLRAIEKEKCTFVYGTPTMYIDMLGQPDLAKF--DLSSVRGGIAAGSPCPPEVMR 384
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N +++ YG TE S P F +S + V
Sbjct: 385 KILNVMGIKEMVIGYGTTENS-------------------PVTFCGFPVDSAERKIET-V 424
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G +PH E KV + + G ++ RG VML YW T + W TGD
Sbjct: 425 GCISPHTEAKVVDPTTGEIVPLGAQGELMIRGYCVMLEYWQDEEKTRECITKDRWYKTGD 484
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
I S+D + GR I GGEN+YP E+E L HP I+ VVG+ + R+ E V
Sbjct: 485 IASLDQFAYCKIEGRIKDLIIRGGENIYPAEIEQFLHTHPKILEAQVVGVKDERMGEEVC 544
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+RL+E + + E ++ +C+ K + +K PR ++L+ + +PLT
Sbjct: 545 ACIRLKEGQE----------------CTVEEIKAYCKGK-IAHYKVPR-YILFVQDYPLT 586
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ ++R L
Sbjct: 587 ITGKIQKHKLRERTEKQL 604
>gi|149185931|ref|ZP_01864246.1| acyl-CoA synthase [Erythrobacter sp. SD-21]
gi|148830492|gb|EDL48928.1| acyl-CoA synthase [Erythrobacter sp. SD-21]
Length = 516
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 143/312 (45%), Gaps = 46/312 (14%)
Query: 15 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 74
+F L+ EQ +T L VPA + + R K T ++K +L G +P +L+
Sbjct: 233 EFTPDGVLDGFEQG-ITRLFIVPAALQMVVQHPRAKTT--DMSAIKYVLYGAAPIPLDLL 289
Query: 75 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 134
+EA + P A + YGMTET+ ++ + D L+ ++ A
Sbjct: 290 REAVKTIPDAGFLQCYGMTETTGTIAALPPEDHDLDGNQRMKSA---------------- 333
Query: 135 VGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK P VELKV + + VG ++ R M YW+ A S S + W+ TGD
Sbjct: 334 -GKAVPGVELKVIGEDDAELPRGEVGELICRSPSNMAGYWNLPEATES-SLVDGWMHTGD 391
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+D+ G V++ R I SGGENVYP +VE+ + HP I + V+G+ + E V
Sbjct: 392 AAYMDEDGYVYIQDRMKDMIISGGENVYPAQVESAIYGHPQIAEVAVIGVPDETWGETVK 451
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRKPFPL 308
AC+ L+ + E++ +K + L GFK PR + VL P
Sbjct: 452 ACIVLKPGEELDEASVIAWTKER-----------------LAGFKVPRSIDVL--DVMPR 492
Query: 309 TSTGKIRRDEVR 320
++GKI R ++R
Sbjct: 493 NASGKILRKDLR 504
>gi|284041712|ref|YP_003392052.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
gi|283945933|gb|ADB48677.1| AMP-dependent synthetase and ligase [Conexibacter woesei DSM 14684]
Length = 545
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 149/329 (45%), Gaps = 49/329 (14%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP F+ + L AV Q TSL VP + +A L S++ +
Sbjct: 248 GACMV-IPSAGFDPLATLRAVAQERCTSLYGVPTMF--IAELEHPSFAEHDLSSLRTGIM 304
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+MK+ + ++ YGMTETS T DP G
Sbjct: 305 AGSPCPIEVMKQVIDKMHMREVSICYGMTETSPVSTQTRTDDPLELRVGS---------- 354
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
VG+ PHVE+KV + + G + TRG VML YW +
Sbjct: 355 ----------VGRVGPHVEVKVVEPDTGMIVKRGETGELRTRGYSVMLGYWGELEKTAEA 404
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ ++DD G V +VGR + GGENVYP E+E +L H ++ + VVG
Sbjct: 405 IDAAGWMHTGDLATMDDAGYVAIVGRIKDMVIRGGENVYPRELEELLHLHDDVVDVQVVG 464
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +A+ E + A VRLR+ E + +R CRE+ + FK PR
Sbjct: 465 VPDAKYGEELCAWVRLRDGAAVGEDD----------------VRAFCRER-VAHFKVPR- 506
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
VL+ FP+T TGK+++ ++R + L
Sbjct: 507 HVLFVDEFPMTVTGKVQKYKMREATIERL 535
>gi|383320319|ref|YP_005381160.1| acyl-CoA synthetase/AMP-acid ligase [Methanocella conradii HZ254]
gi|379321689|gb|AFD00642.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Methanocella conradii HZ254]
Length = 583
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 47/327 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA + GA V + F+ S L AVE+ T+L VP + +A L S+
Sbjct: 279 MACVTHGATMVLPAEYFDPVSTLSAVEKERCTALHGVPTMF--IAELEHPDFKKFDLSSL 336
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + ++ YG TE S LT + DP
Sbjct: 337 RTGIMAGSPCPIEYMKKVSTLMNMRDVVITYGQTEASPGLTMSSTADPL----------- 385
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ + VGKP PH E+K+ + + G I RG +M Y++
Sbjct: 386 ---------ERRVSTVGKPMPHAEIKIVDPKTGKMVPRGQPGEICARGYMIMKGYYNNPE 436
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A + WL TGD+G +DD G + GR + GGEN+YP EVE L +HP I
Sbjct: 437 ATSLAIDKDGWLHTGDLGILDDEGYCKITGRLKDMVIRGGENIYPREVEEFLYEHPSISD 496
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V+G+ + + E ++A ++L+ + C+ ++ E +++ CR K + +
Sbjct: 497 VQVIGVPDLKYGEELMAWIKLK-------NGCN---------VTPEEIKEFCRGK-IAHY 539
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR ++ + FP+T TGKI++ ++R
Sbjct: 540 KIPR-YIKFVDEFPMTVTGKIQKYKMR 565
>gi|386811464|ref|ZP_10098690.1| long-chain-fatty-acid--CoA ligase [planctomycete KSU-1]
gi|386406188|dbj|GAB61571.1| long-chain-fatty-acid--CoA ligase [planctomycete KSU-1]
Length = 483
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 51/322 (15%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-VKKTWKGRDSVKKILN 64
VGA V++ +F LE +E++ +T + +P++ L+R V T S++ +
Sbjct: 207 VGATVVYLERFSGPKVLEVIEKYKITCISAIPSMYR---MLVRAVTSTKHNVSSLRLCTS 263
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
GG LP E++ +FP +L+ YG+TE ++ ++ T P+ + P
Sbjct: 264 GGEHLPGEILAAFNKAFP-VRLMEGYGLTEATAVVSVNT------------PEKY---KP 307
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
NS+ G P ++E+K+ + ++ G I +G ++M Y+
Sbjct: 308 NSI--------GAPLDNLEVKIAGESGQCLPANKEGEIWVKGPNIMKGYYKLPNETEKTI 359
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
T + WL TGD G +D G +W+ GR+ I GENV P E+E V+ +H + + VVG+
Sbjct: 360 TSDNWLKTGDYGKVDTEGFLWITGRKKDLIIISGENVSPREIEQVIGEHEKVFEVAVVGV 419
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ E+ AC+ L E SE E +R HC ++ L +K P+ F
Sbjct: 420 PDKVRGEVPKACIVLHEHAMCSE----------------EEIRDHCMQR-LPNYKVPKYF 462
Query: 300 VLWRKPFPLTSTGKIRRDEVRR 321
+ K P + TGKI + +R+
Sbjct: 463 E-FLKELPHSPTGKILKRVLRQ 483
>gi|194390324|dbj|BAG61931.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 277 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 331
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 332 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 372
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 373 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 431
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 432 EPQKTEEAVDQDKWYWTGDVATMNEQGLCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 491
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 492 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 534
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 535 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 570
>gi|325964235|ref|YP_004242141.1| acyl-CoA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470322|gb|ADX74007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Arthrobacter
phenanthrenivorans Sphe3]
Length = 558
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +ALEAV+ TSL VP + +A L +++ + G P E+M
Sbjct: 278 FNPAAALEAVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSPCPVEVMN 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T MT + TL + V
Sbjct: 336 RVISEMNMKDVAICYGMTETSPVST-MTRHGDTLRQRTE-------------------TV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E KV S V G + TRG VM YW+Q + W+ TGD
Sbjct: 376 GRAMPHLESKVVDPASGEVLERGQIGELCTRGYAVMAGYWNQPDKTIEAIDPDGWMHTGD 435
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G V + GR + GGEN+YP E+E L HP + + V+G+ +A E ++
Sbjct: 436 LARMDGDGYVVIEGRIKDMVIRGGENIYPREIEEFLYTHPSVQDVQVIGVPDATYGEELM 495
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ L+ + DQ++ + CR K L +K PR +V R FP+T
Sbjct: 496 ACIILKPGAE----PLDQAA-----------VAGFCRGK-LAHYKIPR-YVEVRDSFPMT 538
Query: 310 STGKIRRDEVRREVMSHL 327
+GKIR+ E+R + ++ L
Sbjct: 539 VSGKIRKVEMREQAVARL 556
>gi|309791565|ref|ZP_07686062.1| acyl-CoA synthase [Oscillochloris trichoides DG-6]
gi|308226386|gb|EFO80117.1| acyl-CoA synthase [Oscillochloris trichoides DG6]
Length = 564
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ + L+AVE T+L VP + +A L + S++ + G P E+MK
Sbjct: 276 FDALAVLQAVEAERATALYGVPTMF--IAELEHPEFANFDLKSLRTGVMAGSPCPIEVMK 333
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + YGMTETS T + P + G V
Sbjct: 334 RVQSQMHMRDVEICYGMTETSPVSTQTRMGTPLDKQVG--------------------TV 373
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+K+ + + + G + TRG VML YWD A W+ TGD
Sbjct: 374 GQVHPHVEVKIINPLTGRMVPVGETGELCTRGYSVMLGYWDNESATRGAIDPGRWMHTGD 433
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++DD G V +VGR I GGENVYP E+E L HP + + V+G+ + + E ++
Sbjct: 434 LATMDDEGYVNIVGRIKDMIIRGGENVYPREIEEFLYSHPKVSDVQVIGVPDIKYGEEIM 493
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L+ +S+ ++E +R CR + + +K PR ++ + FP+T
Sbjct: 494 AWIKLKPG---------ESADDEE-------IRTFCRGQ-IAHYKIPR-YIKFVDAFPMT 535
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R++ + L
Sbjct: 536 VTGKIQKFLMRQQSIQDL 553
>gi|261419843|ref|YP_003253525.1| AMP-binding protein [Geobacillus sp. Y412MC61]
gi|297530199|ref|YP_003671474.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|319766657|ref|YP_004132158.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261376300|gb|ACX79043.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|297253451|gb|ADI26897.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|317111523|gb|ADU94015.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 544
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K LE VE T+L VP + +A L S++
Sbjct: 248 LACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK + AYG TE S +T DP LE +
Sbjct: 306 TGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE------ 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 359 -------------TVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEA 405
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ +
Sbjct: 406 TNEAIDADGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDV 465
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + E V+A + L++ ++E +R+ CR N++ K
Sbjct: 466 QVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNISRHK 508
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR ++ + +P+T++GKI++ ++R
Sbjct: 509 IPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|73538583|ref|YP_298950.1| AMP-dependent synthetase/ligase [Ralstonia eutropha JMP134]
gi|72121920|gb|AAZ64106.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 518
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 53/331 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + + GA H IP F++K L+ + + V ++ VP ++ A L ++
Sbjct: 218 VTLFVAGATHALIPAFDAKEVLDTMVREQVNEILLVPTMLQ--AVLSHPDFASHDLSGLQ 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I G + + L+ A + P+ + AYG+TE + ++
Sbjct: 276 RINYGASPISAGLLDAALAALPQVQFFHAYGLTEAAPVVS-------------------- 315
Query: 121 NVTPNSVHQPQGVC------VGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYW 169
V P H P+G G+ V +K+ + + VG I+ RG +VM YW
Sbjct: 316 -VNPPVNHGPEGRASGLYRSAGRAGYGVTVKIVDEQGVEVPRNTVGEIIVRGPNVMQGYW 374
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
++ A+ + + + WL TGD +D+ G +++V R I SGGENVY EVE VL +HP
Sbjct: 375 NK-PAETAATLRDGWLHTGDGAYMDENGYLFIVDRLKDMIVSGGENVYSAEVENVLSRHP 433
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ V+G+ +AR E V A + L+ Q E+ LR+HCR+
Sbjct: 434 AVASCAVIGVPDARWGEAVHAVIVLKPGAQADEAG----------------LREHCRQF- 476
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ G+K P+ + +R PL++ GKI + ++R
Sbjct: 477 IAGYKCPK-SIEFRAEMPLSAAGKILKRDLR 506
>gi|443632447|ref|ZP_21116626.1| AMP-binding domain-containing protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347270|gb|ELS61328.1| AMP-binding domain-containing protein [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 549
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFEAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIEKMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHAEVKIVEPGTCQEVQRGVQGELCTRGYHVMKGYYKDEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP I+ +
Sbjct: 409 TRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S E L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPEELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +V++ +P+T++GKI++ ++R + + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTIEMYR 544
>gi|441519811|ref|ZP_21001483.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441460564|dbj|GAC59444.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 550
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 154/337 (45%), Gaps = 47/337 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD- 57
+A + G V P F+ K+ L AVE++ TSL VP + +A+LA L D
Sbjct: 247 LAAIAFGCAMVIPAPAFDPKATLAAVEKYRCTSLYGVPTMFIAELALLDSSADEGTTFDL 306
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
S++ + G P ++M+ + +++ YGMTETS T + D L
Sbjct: 307 SSLRTGIMAGSPCPEQVMRRVIDEMNMSQVSICYGMTETSPVSTQTRMDD-------DLD 359
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
G V G+ PH+E+K+ + G TRG VM YW+
Sbjct: 360 LRVGTV-------------GRVGPHLEIKIADPLTGETLPRGETGEFRTRGYSVMKGYWN 406
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
V + W+ TGD+G + D G V + GR + GGEN+YP E+E L HP
Sbjct: 407 DPEKTAEVLDADGWMATGDLGVMADNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPD 466
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
II V+G+ + + E ++A +R+RE D+ L+++ +R+ ++
Sbjct: 467 IIDAQVIGVPDEKYGEELMAWIRVRE-------GADE--------LTADSIREFAT-GHI 510
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ K P+ +V FP+T TGK+R+ E+R + L
Sbjct: 511 SRHKIPK-YVQIVDEFPMTVTGKVRKVEMRERAIEVL 546
>gi|194376742|dbj|BAG57517.1| unnamed protein product [Homo sapiens]
Length = 640
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + T L P + D+ + + D +
Sbjct: 345 MMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILN----QPDFSSYD-I 399
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE S P
Sbjct: 400 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------------------P 440
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 441 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWG 499
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 500 EPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 559
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 560 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 602
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK P+ ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 603 SHFKIPK-YIVFVTNYPLTISGKIQKFKLREQMERHL 638
>gi|332142719|ref|YP_004428457.1| AMP-binding domain-containing protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552741|gb|AEA99459.1| AMP-binding domain protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 579
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF F ++ L VE+ T+L VP + L K+ ++
Sbjct: 278 LVCLASGACAVFPGESFAPETTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFNMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + + G I +G VM YW
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +DD G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + R E V ++ +E+ E E +R++ + K L FK
Sbjct: 496 AVFGIPDDRYGEQVCLWIKAKENRHIDE----------------EKIREYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YINVVQDYPMTVTGKLQKFKMREHMIETLK 571
>gi|94314746|ref|YP_587955.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358598|gb|ABF12686.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 518
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 144/334 (43%), Gaps = 59/334 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + ++G H +P F+ LE +E+ V ++ VP ++ A L + S+K
Sbjct: 218 VGVFVIGGTHTMVPTFDPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I G + ++ A + P + AYG+TE S ++
Sbjct: 276 RINYGASPINGAVLDAALAAMPNVEFSHAYGLTEASPVVS-------------------- 315
Query: 121 NVTPNSVHQPQGVC------VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 169
V P + H P G G+P V +KV V G I+ RG ++M YW
Sbjct: 316 -VNPPANHGPVGRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIIVRGPNIMQGYW 374
Query: 170 DQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 226
+ KP + + WL TGD +DD G +++V R I +GGENVY EVE L
Sbjct: 375 N----KPEETRQALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALA 430
Query: 227 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 286
QHP + V+G+ + R E V A V LR Q E LR HCR
Sbjct: 431 QHPAVHSCAVIGVPHERWGEAVHAVVVLRPGLQAGEDE----------------LRTHCR 474
Query: 287 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ +K P+ V +R PL++ GKI + ++R
Sbjct: 475 AL-IASYKCPK-SVEFRTELPLSAAGKILKRDLR 506
>gi|433459238|ref|ZP_20417071.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432191472|gb|ELK48421.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 545
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F + L+AV+ H TSL VP + +A L +++ + G P E+MK
Sbjct: 265 FSAADTLQAVQDHRGTSLYGVPTMF--IAELALEDFADYDLSTLRTGVMAGSPCPVEIMK 322
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ YGMTETS P + + +S+ + + V
Sbjct: 323 RVISDMNMGEVAICYGMTETS-------------------PVSTMTRSEDSISR-RTSTV 362
Query: 136 GKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E ++ + +G + TRG VM YW++ + W+ TGD
Sbjct: 363 GRTMPHLESRIVDTQTGETTERGVIGELHTRGYSVMQGYWNEPEKTALAVDQDGWMHTGD 422
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ S+D+ G + + GR + GGEN+YP E+E L QHP I + V+G+ + + E ++
Sbjct: 423 LASMDEDGYITIEGRMKDMVIRGGENIYPREIEDFLYQHPDIQDVQVIGVPDEKYGEELM 482
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
AC+ LR L++E + C+ + L FK P+ V R FP+T
Sbjct: 483 ACIVLRPGAPE---------------LTAEDIAAFCQGR-LAHFKIPKC-VEVRADFPMT 525
Query: 310 STGKIRRDEVRREVMSHLK 328
+GK+R++++R E L+
Sbjct: 526 VSGKVRKEQMREEAAEKLR 544
>gi|348562585|ref|XP_003467090.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Cavia porcellus]
Length = 618
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 147/321 (45%), Gaps = 46/321 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F K ALEA+ + T L P + D+ L + + S++ L G P EL
Sbjct: 337 PSFNGKKALEAISREKGTILYGTPTMFVDV--LNQPDFSSYDLSSIRGGLIAGSPAPPEL 394
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
++ N +++ YG TE +S +TFM D TLE +
Sbjct: 395 IRAMINKMNMKEMVVVYGTTE-NSPVTFMNFPDDTLEQKAE------------------- 434
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH E ++ + + + G + RG VM YW + + W T
Sbjct: 435 SVGRVMPHTEAQIVNVETGQLVALNTPGELCIRGYCVMQGYWAEPEKTFEAVGQDKWYRT 494
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI ++D G +VGR I GGEN+YP E+E HP + + VVG+ + R+ E
Sbjct: 495 GDIATMDKEGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDPRMGEE 554
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ AC+RL+ +E E ++ C+ K ++ FK PR +V++ +P
Sbjct: 555 ICACIRLKSGETITE----------------EEIKAFCKGK-ISHFKIPR-YVVFVADYP 596
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
LT +GKI++ ++R ++ HLK
Sbjct: 597 LTISGKIQKFKLREQMEQHLK 617
>gi|374621345|ref|ZP_09693879.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374304572|gb|EHQ58756.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 517
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + A +V + F+ + E + +T + VPA++ L L S++
Sbjct: 219 MAATLSAARNVVMQSFDPTAVYETIADEEITHALLVPAMIKML--LDHPNAATADMSSME 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KI+ G +P+ ++ +P L+ AYG TE + T ++ D +A G
Sbjct: 277 KIMYGASPMPAATLERCMELWPHIGLVQAYGQTELAPIATMLSPEDH---------RAGG 327
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
+ ++ G+P P +++V SD G ++ RG H M+ YW++ A+
Sbjct: 328 QILKSA---------GRPTPINDVRVVSDEGDDCAVGESGEVVVRGPHTMMGYWNK-PAE 377
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + W+ TGD G D+ G +++V R + +GGENV+ EVE L+ H + +
Sbjct: 378 TEKALKDGWVYTGDAGLFDENGYLYIVDRLKDMVVTGGENVFTTEVENALISHDAVQDVS 437
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + E V A V L + +S+ +EL+ HCR ++ G+K
Sbjct: 438 VIGIPHEEWGEAVHAIVIL---------HAGESAGEEELV-------AHCR-ASIAGYKV 480
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
P+ F +P PL+ GK+ + E+R+
Sbjct: 481 PKGFTFRNEPMPLSGAGKVLKTELRK 506
>gi|113867951|ref|YP_726440.1| AMP-binding domain protein [Ralstonia eutropha H16]
gi|113526727|emb|CAJ93072.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Ralstonia
eutropha H16]
Length = 574
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 156/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + FE ++ ++AV + T+L VP + +A L S+
Sbjct: 275 LACVSSGAAMVFPGQAFEPEATMQAVSEERCTALHGVPTMF--IAQLDHPNFASYDFSSL 332
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 333 RTGIMAGSPCPIETMKRVVSQMHMSEVTIAYGMTETS-------------------PVSF 373
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+++ + V G + TRG VML YWD A
Sbjct: 374 QSSTTDPLDK-RTTTVGRIQPHLEVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EA 431
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + + W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP + +
Sbjct: 432 RTAEAIRDGWMHTGDLATIDAEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAV 491
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E V A + L+ +E +R CR++ + +K
Sbjct: 492 QVFGVPDQKYGEEVCAWIVLKPGASATEDE----------------IRDFCRDQ-IAHYK 534
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R + LK
Sbjct: 535 IPR-YIRFVDEMPMTITGKVQKFVMRERMTQDLK 567
>gi|398906734|ref|ZP_10653576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
gi|398172501|gb|EJM60362.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM50]
Length = 565
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGENVYP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISVEELR 561
>gi|220918306|ref|YP_002493610.1| AMP-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956160|gb|ACL66544.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 154/335 (45%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA+ GA V + F+ + + V+Q T+L VP + +A L + S+
Sbjct: 242 MAITTHGAAMVIPLDNFDPLTVMRTVQQERCTALYGVPTMF--IAELDHPEFQAFDFSSL 299
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK+ ++ YGMTETS T DP
Sbjct: 300 RTGIMAGSPCPVEVMKKVQKDMHMPEVTICYGMTETSPVSTQSRTDDPL----------- 348
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQF 172
+ + VG+ PHVE+K+ + + G + TRG VML YW D
Sbjct: 349 ---------EKRVTTVGQVHPHVEIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPH 399
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ ++ G W+ TGD+ +ID+ G V +VGR + GGEN++P EVE L PG+
Sbjct: 400 ATREAIDDGR-WMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVS 458
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E ++A V+LR + L+ E +R +C+ K T
Sbjct: 459 DVQVIGVPDVKYGEELMAWVKLRPG----------------VTLTGEEVRAYCKGKIAT- 501
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K PR + + FP+T +GK+++ ++R + L
Sbjct: 502 YKIPRYY-KFVDGFPMTVSGKVQKYKMRETAIQEL 535
>gi|148557266|ref|YP_001264848.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148502456|gb|ABQ70710.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 539
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 144/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ S LEAV T+L VP + + + G +++ + G P +M+
Sbjct: 256 FDPGSTLEAVAAEGCTALYGVPTMFVAMLEYPDFDRHDLG--TLRTGIMAGSLCPISVMR 313
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS ++F + D +E + V
Sbjct: 314 AVLDRMNMREVTIAYGMTETSP-VSFQSAMDDAIEL-------------------RVSTV 353
Query: 136 GKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E KV +DG G + TRG VML YW V E W+ TGD+
Sbjct: 354 GQVQPHLEAKVVDADGKVVPLGEPGELCTRGYSVMLGYWGDPEKTADVIDAEGWMHTGDL 413
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G +VGR I GGEN+YP E+E LL HP I+ + G+ +A+ E V A
Sbjct: 414 ATLDEQGYGRIVGRIKDMIIRGGENIYPREIEEHLLTHPDIVDAQIFGVPDAKFGEEVCA 473
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W S S LS E + HCR++ + +K PR L + FPLT
Sbjct: 474 -------WVISRSGA----------LSVEAVIAHCRDR-IAHYKVPRHVRLVEQ-FPLTV 514
Query: 311 TGKIRRDEVRREVMSHLK 328
TGK+++ +R +++ L
Sbjct: 515 TGKVQKFAMREIMVAELS 532
>gi|393199978|ref|YP_006461820.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
gi|406665757|ref|ZP_11073528.1| Long-chain-fatty-acid--CoA ligase [Bacillus isronensis B3W22]
gi|327439309|dbj|BAK15674.1| acyl-CoA synthetase/AMP-acid ligase II [Solibacillus silvestris
StLB046]
gi|405386276|gb|EKB45704.1| Long-chain-fatty-acid--CoA ligase [Bacillus isronensis B3W22]
Length = 563
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 50/329 (15%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
V +PKF+++ AL+ +++ T P + L + K S+K L+G LP
Sbjct: 279 VLLPKFDAEQALKTIDKQKPTLFPGAPTMYIGLLNHPDLAKY--DLSSIKACLSGSAALP 336
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+ +E +L+ YG+TETS ++D H+
Sbjct: 337 LEV-QEKFEELTGGRLVEGYGLTETSPVTHANPIWD---------------------HRI 374
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
G +G P P+ E + G S V G I +G VM YW++ + +++ + W
Sbjct: 375 NG-SIGLPWPNTEAVILRSGESEVLPVGEIGEIAVKGPQVMKGYWNR-PEETAMTFADGW 432
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGD+G +D+ G ++V R+ I +GG N+YP EVE VL +H + +V GI +
Sbjct: 433 FLTGDLGYMDEKGYFYVVDRKKDMIIAGGFNIYPREVEEVLYEHEAVQECIVAGIPDPYR 492
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E V A + L+E +S +KE L ++CR KNL +K PR F +R+
Sbjct: 493 GETVKAYIVLKEG---------KSVTDKE-------LNEYCR-KNLAAYKVPR-FYEFRQ 534
Query: 305 PFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
P T+ GKI R + E + +N
Sbjct: 535 ELPKTAVGKILRRTLIEEEKQKMAQQEAN 563
>gi|160900258|ref|YP_001565840.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160365842|gb|ABX37455.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 520
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 149/317 (47%), Gaps = 43/317 (13%)
Query: 10 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
V +P F+ + L ++QH V L VP ++ L R+ + S++ +L G +
Sbjct: 229 QVIVPAFDELAILAGIQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYGAAPI 286
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
+ L++ A P A AYGMTE S ++ M P PG PQ +
Sbjct: 287 DATLLERAMQLLPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ----------RE 331
Query: 130 PQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
G+P E+++ DG VG I RG VM YW++ A+ + + +
Sbjct: 332 RLLRAAGRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNR-PAETAAALKDG 389
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
W+ TGD+G +D G +++V R I SGGENVY EVE + Q + V+G+ + R
Sbjct: 390 WMHTGDMGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLSQVAMCAVIGVPDER 449
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A + RE +E +EV+ HCRE+ + G+K PR V +R
Sbjct: 450 WGERVHAVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-SVEFR 491
Query: 304 KPFPLTSTGKIRRDEVR 320
PL++ GK+++ ++R
Sbjct: 492 AELPLSAAGKLQKFQLR 508
>gi|26990171|ref|NP_745596.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985110|gb|AAN69060.1|AE016539_1 long-chain-fatty-acid-CoA ligase, putative [Pseudomonas putida
KT2440]
Length = 562
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV ++G++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAVSEVE----------------LREWARAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + LK+
Sbjct: 538 TGKVQKFRMREISVEELKA 556
>gi|333371631|ref|ZP_08463576.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
gi|332975849|gb|EGK12727.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
Length = 568
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + G+ V + +F+ + L VE T+L VP + +A L + + S++
Sbjct: 270 LACVNAGSTMVPVIQFDPLTVLRTVEAERCTALHGVPTMF--IAELNHPQFSSFDLSSLR 327
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N +++ AYG TE+S + DP
Sbjct: 328 TGIMAGSNCPMEVMKRVMNDMGASEITIAYGQTESSPVIGQTRTDDPI------------ 375
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + VGK PHVE+K+ + G + TRG HVM Y+ A
Sbjct: 376 --------ERRVSTVGKKLPHVEVKIIDPATGEEVETGEQGELCTRGYHVMKGYYRMPEA 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ ++D+ G + + GR I GGEN+YP E+E L HP I+ +
Sbjct: 428 TRQAIDEEGWLHTGDLATLDEEGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPKILDV 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VG+ + + E V+A +R +E ES L+ + +R++C K + +K
Sbjct: 488 QIVGVPDEKYGEEVMAFIRPKE----GES------------LTIDEIREYCIGK-IARYK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR L +P+T++GKI++ ++R + + L
Sbjct: 531 IPRYMHLV-DAYPMTASGKIQKFKLREQAIQVL 562
>gi|187921091|ref|YP_001890123.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
gi|187719529|gb|ACD20752.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 542
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 47/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M GAC V + +F +++AL + VT + T PA + + ++ T S++ ++
Sbjct: 253 VMAGACTVLLERFSARAALARIASERVTYIPTAPAAIVAMLNAPELRDT--DCSSLRVMV 310
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG +++KE +FP A+LI YGM ET ++ L D + G
Sbjct: 311 TGGASASLDMIKEFETAFPLARLIELYGMLETGFH-SYTRLDDDPVRVIG---------- 359
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
VG+ +E+ V D V G + RG V L Y D A
Sbjct: 360 ----------TVGRCVDELEIGVLDDHGRLVEHGQTGELSARGPSVHLGYLDNAQANVES 409
Query: 179 STGEVWLDTGDIGSIDDG-GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
T + W TGD+G I DG GN+ + GR+ I GG+ +P E+E +L +H + I +V
Sbjct: 410 FTSDGWFRTGDLGEIVDGRGNIRISGRKKEIINRGGKKYFPREIEDLLYEHHVFLQIAIV 469
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI +ARL E C L+ Q + + K++ + +K P
Sbjct: 470 GIPDARLGERNCLCAILKPGAQITLNEVIALLKDR-----------------VADYKLPE 512
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREV 323
V+ + FP+T +GKIRR E+ +++
Sbjct: 513 ELVVMDE-FPMTPSGKIRRAELLKQL 537
>gi|406596826|ref|YP_006747956.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406598074|ref|YP_006749204.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406374147|gb|AFS37402.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
gi|406375395|gb|AFS38650.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
Length = 579
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF F+ ++ L VE+ T L VP + L K ++
Sbjct: 278 LVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + V G I RG VM YW +
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + + E V ++ +E+ E DQ +R + + K L FK
Sbjct: 496 AVFGIPDNKYGEQVCLWIKEKENRHIDE---DQ-------------IRDYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ K +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YISVVKEYPMTVTGKLQKFKMREYMIETLK 571
>gi|119478013|ref|ZP_01618113.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
gi|119448926|gb|EAW30168.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
Length = 517
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 146/328 (44%), Gaps = 49/328 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M L+ G H F+ F++ L+ VT + VPA++ L K R ++
Sbjct: 219 MNTLLAGGSHAFVAGFDAGLVLKIFSDWKVTHTLIVPAMVKMLLAHPDAGKADLSR--LE 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
KI G +P+ L+ +A +P+ AYG TE + +T + D + G
Sbjct: 277 KITYGASPMPAALLSDAMRLWPQVGFTQAYGQTEMAPVITTLNAEDH---------RKGG 327
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
++ ++ G+P P E+++ + V G ++ +G H ML YW+ K
Sbjct: 328 DILKSA---------GRPTPVSEVRLLDSDDNDVELGVQGEVVVKGPHAMLGYWN----K 374
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W+ TGD G D G +++V R I +GGENV+ EVE L+ H +
Sbjct: 375 PDETAKALVDGWVYTGDAGIFDASGYLYIVDRVKDMIITGGENVFTTEVENALISHDAVQ 434
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+GI + EMV V L + SE+ L HCR K++ G
Sbjct: 435 DVAVIGIPHDEWGEMVHGIVILVAGMEVSEA----------------ALIGHCR-KSIAG 477
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K P+ +P PL+ GK+ + E+R
Sbjct: 478 YKCPKSISFREQPLPLSGAGKVLKTELR 505
>gi|410862984|ref|YP_006978218.1| AMP-binding protein [Alteromonas macleodii AltDE1]
gi|410820246|gb|AFV86863.1| AMP-binding domain protein [Alteromonas macleodii AltDE1]
Length = 579
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF F ++ L VE+ T+L VP + L K+ ++
Sbjct: 278 LVCLASGACAVFPGESFAPETTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFNMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + + G I +G VM YW
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +DD G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDDEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + R E V ++ +E+ E E +R++ + K L FK
Sbjct: 496 AVFGIPDDRYGEQVCLWIKAKENRHIDE----------------EKIREYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YINVVQDYPMTVTGKLQKFKMREHMIETLK 571
>gi|148653865|ref|YP_001280958.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572949|gb|ABQ95008.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 596
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 50/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A+L G C V+ FE S L+AV+ T+L VP + +A L ++
Sbjct: 302 LAILTHGGCIVYPNDGFEPLSVLQAVQDEKCTALHGVPTMF--IAELDHPDFGKYDLSTL 359
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + +++ AYGMTETS + P
Sbjct: 360 RTGIMAGSSCPIEVMRRVIDEMHMSEVTIAYGMTETSPVSCQTNKHTPL----------- 408
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQF 172
Q VG P++E+K+ + V G +LTRG VM YW +F
Sbjct: 409 ---------DKQVSTVGLVQPNLEVKIVDTQTGEVVPIGETGELLTRGYSVMKGYWGSRF 459
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ ++ G W+ TGD+ ++D+ G + +VGR + GGEN+YP E+E L +HP I
Sbjct: 460 KTREAIQDG--WMHTGDLATMDEDGYIKVVGRSKDMVIRGGENIYPVEIENYLYRHPKIS 517
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ VVG+ + + E++ A + R+ Q +E ++Q C++ N+
Sbjct: 518 DVQVVGVPDKKYGEVLAAWIIARKGEQLTEDE----------------VKQFCKD-NIAH 560
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P+ F + + +P+T TGKI++ ++ ++ L
Sbjct: 561 YKVPQYF-RFVEEYPMTITGKIQKYKITEMMIEEL 594
>gi|423696441|ref|ZP_17670931.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
gi|388003967|gb|EIK65294.1| long-chain-fatty-acid--CoA ligase Acs [Pseudomonas fluorescens
Q8r1-96]
Length = 565
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLKAVAEEKATALYGVPTMF--IALLDQPQRGDFDVSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N A++ AYGMTETS +L+T P + + V
Sbjct: 342 RVINEMHMAEVQIAYGMTETSPV---------SLQT-----------GPTDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + VG + TRG VML YW+ + W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNIVPRDAVGELCTRGYSVMLGYWNNPKGSTDAIDPDGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G V +VGR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ATMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPVVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHSASEQE----------------LQAWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELRD 562
>gi|288931421|ref|YP_003435481.1| AMP-dependent synthetase and ligase [Ferroglobus placidus DSM
10642]
gi|288893669|gb|ADC65206.1| AMP-dependent synthetase and ligase [Ferroglobus placidus DSM
10642]
Length = 552
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 149/332 (44%), Gaps = 53/332 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M + V P FE+ L AVE++ +T + VP + + VK+ + SV+
Sbjct: 257 MNVFYNAGTVVLFPYFEAGEFLRAVERYRITQIHCVPTHLVAIVNHPEVKR--RDLSSVR 314
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I G +P EL+++ P A +I +G+TE + G
Sbjct: 315 VISVGSAPVPIELLRKVKELMPDATVIEQWGLTEAA---------------------IIG 353
Query: 121 NVTPNSVHQPQGV-CVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYW-D 170
T N VH V G P P VE+K+ G +VG I+ R ++ YW D
Sbjct: 354 --TSNPVHGVIKVGSAGMPVPSVEIKIVDPETGKDLPPGEENVGEIVLRSKKIIREYWND 411
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
K ++ G WL TGDIG +D+ G +++V R+ I G NVYP EVE VL +HP
Sbjct: 412 PERTKEAIRDG--WLYTGDIGYMDEDGYIYIVDRKKDMIIVSGYNVYPSEVEEVLYRHPA 469
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
++ V+G+ + E+ A + L+ ++ ++ E + + R K+L
Sbjct: 470 VLECAVIGVPDEYRGEVPKAFIVLKPEYKGK--------------VTEEEIIEFAR-KHL 514
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
+K PR+ V +R P ++ GKI R +R E
Sbjct: 515 AAYKIPRI-VEFRDELPKSAVGKILRRVLREE 545
>gi|294632131|ref|ZP_06710691.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835464|gb|EFF93813.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 541
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 147/323 (45%), Gaps = 48/323 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V F+ + LEAV++ TSL VP + +A L +++ +
Sbjct: 246 GACLVVPAASFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPGFAEYDLSTLRTGIMA 303
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 304 GSPCPVEVMKRVVAEMHMAEVAICYGMTETSP-VSLQTRMDDDLE--------------- 347
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 348 --HRTG--TVGRVLPHLEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEQPEKTAEAI 403
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 404 DAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGV 463
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ + E V+ACV D + L+ E LR C ++ L +K P RL
Sbjct: 464 PHEKYGEEVLACV----------IPLDPADP-----LTLEELRAFCADR-LAHYKIPSRL 507
Query: 299 FVLWRKPFPLTSTGKIRRDEVRR 321
VL FP+T +GK+R+ E+R+
Sbjct: 508 SVL--DAFPMTVSGKVRKIELRQ 528
>gi|426237739|ref|XP_004012815.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Ovis aries]
Length = 572
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + + L P + D+ + + D
Sbjct: 277 MVSLMHGVTLILCSPVFEGKKTLEAISRERGSFLYGTPTMFVDVLN----QPDFSSYDIS 332
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 333 TIRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 373
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 374 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGE 432
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 433 PRKTEEAIGQDKWYRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 492
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 493 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 535
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 536 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 570
>gi|404442480|ref|ZP_11007659.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
gi|403657052|gb|EJZ11842.1| AMP-binding domain protein [Mycobacterium vaccae ATCC 25954]
Length = 545
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L+A+E T++ VP + +A + S++ + G P E+
Sbjct: 256 PSFDPAQTLQAIESERCTAVYGVPTMF--IAMQNHADFAERDLSSLRTGIMAGAVCPVEV 313
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK +++ AYGMTETS ++ TL D LE +
Sbjct: 314 MKRCVEDMHMSEIAIAYGMTETSP-VSCQTLIDDDLER-------------------RTS 353
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + + G TRG VML YWD + W+ T
Sbjct: 354 SIGRAHPHVEVKIVDPETGEIVERGAAGEFCTRGYSVMLGYWDDDDKTREAVDADGWMHT 413
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + G +VGR + GGEN+YP E+E L HP I V+G+ + R E
Sbjct: 414 GDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREIEEFLYTHPDIEDAQVIGVPDERYGEE 473
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
V A +R+R L ++ +R+ K L +K PR +V FP
Sbjct: 474 VCAWIRMRPG---------------RAALDADAVREFAAGK-LAHYKIPR-YVHVVDEFP 516
Query: 308 LTSTGKIRRDEVR 320
+T TGK+R+ E+R
Sbjct: 517 MTVTGKVRKVEMR 529
>gi|284992142|ref|YP_003410696.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284065387|gb|ADB76325.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 514
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 142/317 (44%), Gaps = 45/317 (14%)
Query: 9 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 68
V IP F+ + L AV++H VT ++ VP ++ + RV + +V++++ G
Sbjct: 226 TQVAIPVFDPVAVLTAVQEHGVTDVLLVPTMIQLVVDHPRVDEF--DLTTVRRLMYGASP 283
Query: 69 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 128
+ L+ P A+ + AYGMTE + T +T D Q P+ H
Sbjct: 284 MSDALLGRTMKVLPNARFLQAYGMTELAPVATLLTADD------HQDPR----------H 327
Query: 129 QPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ VG+ APH E++V VG ++ RG VML YW++ G
Sbjct: 328 RR---SVGRAAPHAEVRVVGPDDVELPRGEVGEVVVRGGSVMLGYWNRPEETAEALRGG- 383
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
W+ TGD G +DD G ++L R I SGGENVY EVE+VL QHP + V+G+ +
Sbjct: 384 WMHTGDAGRMDDEGYLYLTDRLKDMIISGGENVYSVEVESVLAQHPAVATCAVIGVPDDT 443
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A V ++ E LR C + L +K PR +
Sbjct: 444 WGERVHAVV----------------VPAAGATVTLEELRASCTGR-LASYKVPRSMDVV- 485
Query: 304 KPFPLTSTGKIRRDEVR 320
PL+ GK+ + E+R
Sbjct: 486 DALPLSPAGKVLKRELR 502
>gi|407689016|ref|YP_006804189.1| AMP-binding protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292396|gb|AFT96708.1| AMP-binding domain protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 579
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF F+ ++ L VE+ T L VP + L K ++
Sbjct: 278 LVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFYMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + V G I RG VM YW +
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEIK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + + E V ++ +E+ E DQ +R + + K L FK
Sbjct: 496 AVFGIPDNKYGEQVCLWIKAKENRHIDE---DQ-------------IRDYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ K +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YISVVKEYPMTVTGKLQKFKMRECMIETLK 571
>gi|398857242|ref|ZP_10612943.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398241091|gb|EJN26750.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 568
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 141/319 (44%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHNATEQE----------------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L S
Sbjct: 544 TGKIQKFRMREISIEELAS 562
>gi|407701339|ref|YP_006826126.1| AMP-binding protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250486|gb|AFT79671.1| AMP-binding domain protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 579
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ L GAC VF + F+ ++ L VE+ T L VP + L + ++
Sbjct: 278 LVCLASGACAVFPGESFDPETTLRTVEEEKCTGLHGVPTMFIAELELPNFRDF--DLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ELM++ + F +++ YG TE S + +T D E
Sbjct: 336 RTGVMAGSTCPEELMRKVHSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
Q VG+ PH E+K+ + V G I RG VM YW +
Sbjct: 387 -----------QVKTVGRAMPHTEVKIIDAQGNTVSIGEPGEICARGYCVMKGYWGDEVK 435
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ E WL +GD+G +D+ G V +VGR I GGEN+YP E+E VL QH +
Sbjct: 436 TKATIDDEGWLHSGDLGEMDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHQDVSDA 495
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V GI + + E V ++ +E+ E E +R + + K L FK
Sbjct: 496 AVFGIPDNKYGEQVCLWIKAKENRHIDE----------------EQIRDYLKSK-LAYFK 538
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ K +P+T TGK+++ ++R ++ LK
Sbjct: 539 VPK-YISVVKEYPMTVTGKLQKFKMREYMIETLK 571
>gi|194289655|ref|YP_002005562.1| amp-binding domain protein [Cupriavidus taiwanensis LMG 19424]
gi|193223490|emb|CAQ69495.1| putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
[Cupriavidus taiwanensis LMG 19424]
Length = 574
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 157/333 (47%), Gaps = 51/333 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ ++ + AV + T+L VP + +A L + S+
Sbjct: 275 LACVSTGAAMVFPGEAFDPEATMRAVSEERCTALHGVPTMF--IAQLDHPRFADYDFSSL 332
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 333 RTGIMAGSPCPIETMKRVVAQMHMSEVTIAYGMTETS-------------------PVSF 373
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ + V G + TRG VML YWD A
Sbjct: 374 QSSTTDPLDK-RTTTVGRIQPHLEVKIVDASGAIVPVGEKGELCTRGYSVMLGYWDD-EA 431
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + + W+ TGD+ +ID+ G +VGR + GGEN+YP E+E L +HP + +
Sbjct: 432 RTAEAIRDGWMHTGDLATIDEEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAV 491
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E V A + L+ +E +R CR++ + +K
Sbjct: 492 QVFGVPDPKYGEEVCAWIVLKPGENATEDE----------------IRAFCRDQ-IAHYK 534
Query: 295 APRLFVLWRKPFPLTSTGKIR----RDEVRREV 323
PR ++ + PLT TGK++ RD++ RE+
Sbjct: 535 IPR-YIRFVDEMPLTVTGKVQKFVMRDQMVREL 566
>gi|148547532|ref|YP_001267634.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|395449760|ref|YP_006390013.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|148511590|gb|ABQ78450.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|388563757|gb|AFK72898.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 557
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV ++G++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE + LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAVSE----------------DALREWARAR-IAHFKVPRYF-RFVDAFPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + L +
Sbjct: 538 TGKVQKFRMREISIEELSA 556
>gi|407790159|ref|ZP_11137255.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
gi|407205174|gb|EKE75150.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
Length = 558
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 143/327 (43%), Gaps = 46/327 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GA VF F++ S L+AV + T+L VP + +A L + S++ +
Sbjct: 267 GATAVFPAEAFDADSTLKAVSEERCTALHGVPTMF--IAELEHPQFDQFDLTSLRTGVMA 324
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P ELMK+ +++ AYG TE SS + +TL D LE + G V
Sbjct: 325 GATCPVELMKKVIGKLHMEEVLIAYGQTE-SSPINHITLRDDPLE------KRIGTV--- 374
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 180
GK H E+K+ V G I R VML YWD
Sbjct: 375 ----------GKAGAHQEVKIVDAFGDEVPLGERGEICNRAYSVMLGYWDDPQKSAETVD 424
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL +GD+G +D G V +VGR I GGEN+YP E+E +HP + I V GI
Sbjct: 425 QDGWLHSGDLGVMDQDGYVQVVGRIKDMIIRGGENIYPREIEEFYYRHPKVQDIQVFGIP 484
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ + E V A V LR Q +E +R E L+ FK PR F
Sbjct: 485 DDKYGEQVCAWVMLRSGQQ----------------ADAEEMRAFA-EGELSHFKIPRHF- 526
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ +P+T TGKI++ +R ++ L
Sbjct: 527 HFVDNYPMTVTGKIQKFRMRELMLQSL 553
>gi|455641051|gb|EMF20249.1| AMP-binding domain protein [Streptomyces gancidicus BKS 13-15]
Length = 530
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 142/322 (44%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV+Q TSL VP + +A L S++ +
Sbjct: 243 GACMVIPAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMA 300
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS P + +
Sbjct: 301 GSPCPVEVMKRVVAEMHMEQVSICYGMTETS-------------------PVSLQTRMED 341
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ G VG+ PH+E+K+ + G + TRG VML YWD+
Sbjct: 342 DLEHRTGT-VGRVLPHIEVKIVDPATGVTVPRGTSGELCTRGYSVMLGYWDEPEKTAEAI 400
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + D G V +VGR I GGEN+YP E+E L HP + + VVG+
Sbjct: 401 DRGRWMHTGDLAVMRDDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKVADVQVVGV 460
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV R+ L L+ L +C + L +K P RL
Sbjct: 461 PHERYGEEVLACVIPRD-------------PADPLTLAE--LHAYC-DGQLAHYKVPSRL 504
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L + FP+T +GK+R+ E+R
Sbjct: 505 ELL--ETFPMTVSGKVRKIELR 524
>gi|426237733|ref|XP_004012812.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Ovis aries]
Length = 615
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + + L P + D+ + + D
Sbjct: 320 MVSLMHGVTLILCSPVFEGKKTLEAISRERGSFLYGTPTMFVDVLN----QPDFSSYDIS 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 376 TIRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 416
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 417 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGE 475
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 476 PRKTEEAIGQDKWYRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 535
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 536 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 578
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 579 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 613
>gi|297583689|ref|YP_003699469.1| AMP-dependent synthetase and ligase [Bacillus selenitireducens
MLS10]
gi|297142146|gb|ADH98903.1| AMP-dependent synthetase and ligase [Bacillus selenitireducens
MLS10]
Length = 566
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 141/324 (43%), Gaps = 60/324 (18%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +G + +PKF+ K L+A+E+H T P + L + K S+K +
Sbjct: 275 IRLGYKMIIMPKFDPKGILKAIEKHRATLYPGAPTMYIGLLNHPDISK--HDLSSIKACI 332
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ + + K KL+ YG+TETS P A N+
Sbjct: 333 SGSAPLPVEVQSQFED-ITKGKLVEGYGLTETS-------------------PVAIANLI 372
Query: 124 -----PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQF 172
P S+ G P P E+ + S G + VG I RG VM YW
Sbjct: 373 WGKRKPGSI--------GLPWPDTEIMILSAETGEAAGPNEVGEICIRGPQVMKGYW-HL 423
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
S + W +GD+G +D+ G ++V R+ I +GG N+YP EVE VL +H +
Sbjct: 424 PEATQASFRDDWFLSGDMGYMDEEGYFYIVDRKKDMIIAGGFNIYPREVEEVLYEHDAVQ 483
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + E V A V L++ + +E + D+ ++ K L
Sbjct: 484 EVCVIGVPDPYRGETVKAFVVLKDGSKVTEDDLDEFAR-----------------KQLAS 526
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRR 316
FK PRL+ +R P T GKI R
Sbjct: 527 FKVPRLYE-FRDELPKTMVGKILR 549
>gi|421749451|ref|ZP_16186888.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
gi|409771687|gb|EKN53910.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
Length = 563
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 161/339 (47%), Gaps = 49/339 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA +F + F+ + ++AV + T+L VP + +A L T S+
Sbjct: 264 LACVSVGARMIFPGEAFDPLATMQAVHEERCTALHGVPTMF--IAQLDHPDFTKFDFTSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK A++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPIEVMKRVVKDMHMAEVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH++ K+ + V G + TRG VML YW D
Sbjct: 363 QSATDDPLEK-RVATVGRVQPHLQCKIVDETGQVVPVGATGELCTRGYSVMLGYWEDDAR 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ +ID+ G +VGR + GGEN+YP E+E L +HP +
Sbjct: 422 TREAIRDG--WMHTGDLATIDEQGYCNIVGRVKDMVIRGGENLYPREIEEFLFRHPKVQA 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E + A + L+ QS+ E +R+ CR++ + +
Sbjct: 480 VQVFGVPDPKYGEELCAWIVLKPG---------QSATEDE-------IREFCRDQ-IAHY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 332
K PR +V + P+T TGK+++ +R ++ L P+
Sbjct: 523 KIPR-YVRFVDDMPMTVTGKVQKFVMRETMIRELGLEPA 560
>gi|333920952|ref|YP_004494533.1| feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483173|gb|AEF41733.1| Feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 513
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 52/325 (16%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+G HV +P F+ + L A+++H VT + +P ++ LA S++ + G
Sbjct: 223 LGGTHVIVPAFDPPAVLAAIQEHRVTETVLIPIMIQLLAD--HPAAAEHDLSSMRHLFYG 280
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G + ++ A +FP A+ + AYGMTE ++ T +T D T G
Sbjct: 281 GAPISRAVLDRAVAAFPHARFVQAYGMTEVAAIATMLTPGDHTDTLLG------------ 328
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVST 180
G+ PH E+++ VG I+ G HVML Y L KP +
Sbjct: 329 --------TAGRALPHSEVRIVDAEDLEVPRGTVGEIVVCGGHVMLGY----LNKPEETA 376
Query: 181 G---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W+ TGD G +DD G V +V R I +GGENVY EVE + HP + V+
Sbjct: 377 AVLRDGWMHTGDGGFMDDAGYVHVVDRLKDMIITGGENVYSAEVENAISAHPAVALCAVI 436
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + E V A + R ++ E +R+H + + G+K PR
Sbjct: 437 GIPDPTWGERVHAVIVCRAGRT----------------VTFEEIREHTKAL-IAGYKVPR 479
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
+ + PL+ GKI + +R++
Sbjct: 480 SIEI-TESLPLSGAGKILKRALRKQ 503
>gi|269963119|ref|ZP_06177454.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832083|gb|EEZ86207.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 521
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 49/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK
Sbjct: 226 ASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKH 283
Query: 62 IL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
L +GG +P E++++ + F + ++ YG++ET+ TF +
Sbjct: 284 SLRLGVSGGASMPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHID------------ 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G+ P SV QP V K A ++K + +G + + VM Y+ +P
Sbjct: 331 --GDRLPGSVGQPLCGYVIKIA---DVKGHARAIGELGEVCIKSPSVMKGYY----GRPE 381
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + +
Sbjct: 382 ATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMV 441
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG + RL E V A V L + +++C S + L CRE+ L +K
Sbjct: 442 AVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTLIAWCREQ-LADYK 484
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V RK P+T+TGKI + E+
Sbjct: 485 YPRR-VFIRKALPMTATGKILKRELH 509
>gi|212638029|ref|YP_002314549.1| AMP-binding domain-containing protein [Anoxybacillus flavithermus
WK1]
gi|212559509|gb|ACJ32564.1| Acyl-CoA synthetase/AMP-acid ligase II [Anoxybacillus flavithermus
WK1]
Length = 546
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 148/330 (44%), Gaps = 52/330 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K L+ V+ T+L VP + +A L S++
Sbjct: 248 LACVTVGATMVPLEQFHPKQVLQTVQDEKCTALHGVPTMF--IAELNDPDFASYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQ 117
+ G P E+MK ++ AYG TE+S +T DP +ET
Sbjct: 306 TGIMAGSNCPIEVMKAVIEKMGAKEITIAYGQTESSPVITQTRTDDPIELRVET------ 359
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQ 171
VG+ PHVE+K+ ++ G + TRG HVM Y++
Sbjct: 360 -----------------VGRALPHVEVKIVDPVTNQEVPPGVQGELCTRGYHVMKGYYNN 402
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A E WL TGD+ +D+ G + GR I GGEN+YP E+E L +HP +
Sbjct: 403 PSATQEAIDEEGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKV 462
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + VVG+ + E V+A + L+E + E +R C E +++
Sbjct: 463 LDVQVVGVPDETYGEEVMAWIILKEGEH----------------ATPEDIRSFC-EGHIS 505
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
K PR ++ + +P+T++GKI++ ++R
Sbjct: 506 RHKIPR-YIEFTTAYPMTASGKIQKFKLRE 534
>gi|377560199|ref|ZP_09789718.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377522649|dbj|GAB34883.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 498
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 145/332 (43%), Gaps = 50/332 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ G V + +F + ++A ++ TS VP + +A LI + R + ++
Sbjct: 209 LVKGGSSVILDRFTPQGFVDAAVEYGATSTFMVPTM---IAMLIEDAVIDRDRLGLTRLC 265
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG + L++ + YG E ++T + P TP +L A
Sbjct: 266 YGGAPIAPALLRRGIDKLGPV-FAQLYGQAEAPLAITCLQ---PHEHTPERLASA----- 316
Query: 124 PNSVHQPQGVCVGKPAPHVELKV-CSDGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
GK VE+ + + G+S G + TRG H M YW + A
Sbjct: 317 ------------GKAYTFVEVDIRDAQGNSLPAGAAGEVCTRGPHTMSGYWQRPEATAET 364
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG +DD G ++L+ RR+ I SGG NVYP EVE VLL HP + VVG
Sbjct: 365 VGADGWLRTGDIGQLDDDGYLYLLDRRHDVIISGGFNVYPREVEDVLLTHPAVREAAVVG 424
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R + V A V +RE ++ + + HC L GFK PR
Sbjct: 425 VDDERWGQRVSAAVVVRED------------------VTEQEIVDHC-STQLAGFKRPRH 465
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
W + P +S GK R V RE M+H K +
Sbjct: 466 IEFWDE-LPKSSVGKSLRRTV-REAMAHHKEV 495
>gi|197099966|ref|NP_001125938.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Pongo
abelii]
gi|75061807|sp|Q5R9G9.1|ACSF2_PONAB RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|55729725|emb|CAH91591.1| hypothetical protein [Pongo abelii]
Length = 615
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M LM GA + P F K ALEA+ + + L P + D+ + + D +
Sbjct: 320 MMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN----QPDFSSYD-I 374
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TP P
Sbjct: 375 STMCGGVIAGSPAPPELIRAIINKINMKDLVVAYG-------------------TPENSP 415
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
F + ++V Q + VG+ PH E ++ + + + G + RG VML YW
Sbjct: 416 VTFAHFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGTLAELNTPGELCIRGYCVMLGYWG 474
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGD+ ++++ G +VGR I GGEN+YP E+E HP
Sbjct: 475 EPQKTEEAVDQDKWYRTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPK 534
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL++ + + E ++ C+ K +
Sbjct: 535 VQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTVEEIKAFCKGK-I 577
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 578 SHFKIPR-YIVFVTNYPLTISGKIQKFKLREQMERHL 613
>gi|426237735|ref|XP_004012813.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Ovis aries]
Length = 602
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 155/336 (46%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + + L P + D+ + + D
Sbjct: 307 MVSLMHGVTLILCSPVFEGKKTLEAISRERGSFLYGTPTMFVDVLN----QPDFSSYDIS 362
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 363 TIRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 403
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 404 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNMETGTLTELHTPGELCIRGYCVMLGYWGE 462
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI ++D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 463 PRKTEEAIGQDKWYRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 522
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 523 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 565
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 566 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 600
>gi|113869452|ref|YP_727941.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113528228|emb|CAJ94573.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16]
Length = 557
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 159/333 (47%), Gaps = 50/333 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGAC VF + F+ + ++A + T+L VP + +A L + + ++
Sbjct: 264 LACVSVGACMVFPGEAFDPLATMQAASEERCTALHGVPTMF--IAQLDHPEFSRFDFSAL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK +++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPIEVMKRVVADMHMSEVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E KV + G + TRG VM YW D
Sbjct: 363 QSATDDPLDK-RVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDER 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP +
Sbjct: 422 TREAIRDG--WMHTGDLATIDDEGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQA 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ QS+ +E +R+ CR++ + +
Sbjct: 480 VQVFGVPDQKYGEEVCAWIVLKPG---------QSATEEE-------IRKFCRDQ-IAHY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
K PR ++ + P+T TGK+++ V R+ M H
Sbjct: 523 KIPR-YIRFVSEMPMTVTGKVQK-FVMRDTMIH 553
>gi|56697375|ref|YP_167743.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
gi|56679112|gb|AAV95778.1| AMP-binding enzyme [Ruegeria pomeroyi DSS-3]
Length = 571
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 47/327 (14%)
Query: 7 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GA VF + F+ L+ VE T+L VP + +A L + T + S++ +
Sbjct: 279 GAAMVFPGEAFDPAQTLDTVEAERCTALYGVPTMF--VAMLQELATTSRDLSSLRTGIMA 336
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P ++MK+ + ++ YGMTETS ++F + D + E +
Sbjct: 337 GSPCPVDVMKQVNDRMHMGEVTICYGMTETSP-VSFQSFVDDSTEKRCE----------- 384
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 180
VG+ PH+E+K+ D + V G + TRG VM YWD + + +
Sbjct: 385 --------TVGRIHPHLEVKIVDDTGNTVPVGVQGELCTRGYSVMQGYWDD-PERTAEAI 435
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ W+ TGD+ +D G + GR I GGEN+YP E+E L HP I + V GI
Sbjct: 436 RDGWMHTGDLAVLDADGFCTITGRVKDMIIRGGENIYPREIEEFLFGHPDIKEVQVFGIP 495
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+AR+ E V A W ++ C+ +S+E +R +CR + + FK PR V
Sbjct: 496 DARMGEEVCA-------WVVAKPGCE---------ISAEDVRTYCRGQ-IAHFKVPR-HV 537
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHL 327
P+T TGK ++ +R ++ L
Sbjct: 538 RIVTELPMTITGKPQKFIMRDRMVEML 564
>gi|448237839|ref|YP_007401897.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
gi|445206681|gb|AGE22146.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
Length = 544
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K LE VE T+L VP + +A L S++
Sbjct: 248 LACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK + AYG TE S +T DP LE +
Sbjct: 306 TGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE------ 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 359 -------------TVGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEA 405
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ +
Sbjct: 406 TNEAIDQDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDV 465
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + E V+A + L++ ++E +R+ CR N++ K
Sbjct: 466 QVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNISRHK 508
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR ++ + +P+T++GKI++ ++R
Sbjct: 509 IPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|288922476|ref|ZP_06416661.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288346175|gb|EFC80519.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 525
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 143/317 (45%), Gaps = 52/317 (16%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN-- 64
GA V +P+F ++ AL+ +E+ VT + VP + A L V T +V+ L
Sbjct: 236 GATLVLLPRFTAEKALDLIERENVTVFVGVPTMY--WALLNHVATTGYDASAVRANLRLA 293
Query: 65 --GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
GG LP E++ F ++ YG++ETS TF L P PG
Sbjct: 294 VAGGSSLPMEVLTSFEERF-GVPVLEGYGLSETSPVATFNRLDRP--RRPGS-------- 342
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 177
+G P VE+++ D S+ G I RG +VM Y ++ A
Sbjct: 343 ------------IGLPVWGVEIRISRDDSTEAAVDEPGEICVRGHNVMKGYLNRPEATAE 390
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W TGDIG+ D G +++V R+ I GG NVYP EVE VLL HP + V+
Sbjct: 391 AIDPQQWFHTGDIGTRDADGYIYVVDRKKDMIIRGGFNVYPREVEEVLLTHPAVSLAAVI 450
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + E V A V LR D + KEL+ CRE + +K PR
Sbjct: 451 GVPHPSHGEEVKAFVVLR---------ADAEATEKELV-------DWCREV-MAAYKYPR 493
Query: 298 LFVLWRKPFPLTSTGKI 314
+ V + + P+T+TGKI
Sbjct: 494 I-VEFMESLPMTATGKI 509
>gi|197123507|ref|YP_002135458.1| AMP-binding domain-containing protein [Anaeromyxobacter sp. K]
gi|196173356|gb|ACG74329.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 546
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 154/335 (45%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA+ GA V + F+ + + V+Q T+L VP + +A L + S+
Sbjct: 242 MAITTHGAAMVIPLDNFDPLTVMRTVQQERCTALYGVPTMF--IAELDHPEFQAFDFSSL 299
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK+ ++ YGMTETS T DP
Sbjct: 300 RTGIMAGSPCPVEVMKKVQKDMHMPEVTICYGMTETSPVSTQSRTDDPL----------- 348
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQF 172
+ + VG+ PHVE+K+ + + G + TRG VML YW D
Sbjct: 349 ---------EKRVTTVGQVHPHVEIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPH 399
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ ++ G W+ TGD+ +ID+ G V +VGR + GGEN++P EVE L PG+
Sbjct: 400 ATREAIDDGR-WMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVS 458
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E ++A V+LR + L+ + +R +C+ K T
Sbjct: 459 DVQVIGVPDVKYGEELMAWVKLRPG----------------VSLTGDEMRAYCKGKIAT- 501
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K PR + + FP+T +GK+++ ++R + L
Sbjct: 502 YKIPRYY-KFVDAFPMTVSGKVQKYKMRETAIQEL 535
>gi|398991917|ref|ZP_10694998.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
gi|399015364|ref|ZP_10717637.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398108615|gb|EJL98568.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM16]
gi|398136210|gb|EJM25304.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM24]
Length = 565
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 144/320 (45%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+ V + T L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLQTVAEEKATGLYGVPTMF--IAMLDQPQRAQFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T PN + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPNDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQATAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S+++ G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNEEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHNASELE----------------LQTWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSL 330
TGKI++ +R + LK++
Sbjct: 544 TGKIQKFRMREISIEELKTI 563
>gi|444379507|ref|ZP_21178686.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676381|gb|ELT83083.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 516
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 39/319 (12%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDSV 59
A ++ GA V +P+FE S +E + + VT VP + L A+ +K K R S+
Sbjct: 225 ASILTGATVVLVPRFEPASVIEQIIEQRVTVFAGVPTMYIALQRASEACAEKAEKVRQSL 284
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++GG LP E++++ +F + ++ YG++ET+ TF + L
Sbjct: 285 RLGISGGASLPVEVLRQFEAAF-ELPILEGYGLSETAPVATFNHIDSDRL---------- 333
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
P SV QP +C G ++L S + G + + VM Y+++ A
Sbjct: 334 ----PGSVGQP--LC-GHMIKIIDLAGNSVPTGERGEVCIKSPSVMKGYYNRPEATEETF 386
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W +GDIG +D+ N+++V R I GG NVYP E+E V++ HP I + VVG
Sbjct: 387 V-DGWFKSGDIGYLDEHCNLFIVDRVKDMILRGGYNVYPREIEEVMMCHPAIEMVAVVGE 445
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ RL E + A V L++ + E+ +E++ C+E+ L +K PR
Sbjct: 446 PHERLGEEIHAHVLLKQ--------------DAEVCEEAEIIAW-CKEQ-LADYKYPRR- 488
Query: 300 VLWRKPFPLTSTGKI-RRD 317
V+ R FP+T+TGKI +RD
Sbjct: 489 VIIRSSFPMTATGKILKRD 507
>gi|296330516|ref|ZP_06872994.1| AMP-binding domain protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674565|ref|YP_003866237.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|6449061|gb|AAF08801.1|AF184956_8 YngI [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|296152198|gb|EFG93069.1| AMP-binding domain protein [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412809|gb|ADM37928.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 549
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGATMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFNAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T D L
Sbjct: 309 TGIMAGSPCPSEVMKAVIEKMGMKDITIAYGQTEASPVITQTRANDSFLR---------- 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 359 ----------RVETTGRALPHAEVKIVEPGTYQEVQRGGQGELCTRGYHVMKGYYKDEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP I+ +
Sbjct: 409 TRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPDILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ S E L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKT----------------ASPEELKDYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDEYPMTASGKIQKYKLREKTI 540
>gi|392417372|ref|YP_006453977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390617148|gb|AFM18298.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 487
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 49/321 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSV 59
+A + GA V + F+ ++ V + +T L P + L T+ KGR ++
Sbjct: 211 VASFLRGATMVPVAAFDVDRVVDLVARESITMLPGPPTLYHSLLTVAD-----KGRLATL 265
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G +P EL++ + P L++ YG+TE + TL PG P+
Sbjct: 266 RAAVTGAADIPVELIRRIRDELPFQTLMTGYGLTEAGNV---------TLSRPGDSPE-- 314
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
NV + G P VE+ + DG +L RG +VM Y D LA
Sbjct: 315 -NVARTA---------GLPCEDVEVDIADDGE-----VLVRGYNVMQGYLDDPLATAEAI 359
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL TGD+G+ D G + +VGR+ GG N YP E+E LL+HPGI V+G+
Sbjct: 360 DEDGWLHTGDLGTFTDEGRLCIVGRKKDMFIVGGFNAYPAEIEGFLLEHPGIAQAAVIGV 419
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ RL ++ A + S+ QS LS++ + R + + GFK PR
Sbjct: 420 PDERLGQVGKAFL--------VRSDAAQS-------LSADEVIDWSRAR-MAGFKVPR-S 462
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
V + PL +TGK+ +D ++
Sbjct: 463 VEFLDELPLNATGKVMKDRLQ 483
>gi|348509256|ref|XP_003442166.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 609
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 155/334 (46%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M+M + G VF + S + LEA++ + P + DL + K SV
Sbjct: 315 MSMAVHGITLVFPSAAYNSFANLEAIQSEKCNFVYGTPTMFTDLLSQDLQKYDL---SSV 371
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + GG P E+++ T ++ YG TE +S LTF+ P+
Sbjct: 372 EAGVMGGSPCPPEIVRRLTTDMNMKEITLCYGTTE-NSPLTFLGF-----------PEDN 419
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ N+V G +G H E KV + + G +L RG+ VM YWD+
Sbjct: 420 EELKINTV----GCVLG----HTEAKVVDPTTGEIVPLGASGELLIRGSCVMHGYWDEPE 471
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V + + W TGD S++ G + GR I GGEN+YP E+E L +HP +
Sbjct: 472 KTREVISQDRWYRTGDTASLNSLGYCSIEGRIKDMIIRGGENIYPAEIEQFLYKHPKVKE 531
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + RL E V AC++L+E QSS S+E +R C+ + L+ F
Sbjct: 532 VQVVGVKDERLGEQVCACIKLKEG---------QSS-------SAEEIRAFCKGQ-LSHF 574
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P +VL+ +PLT +GKI+++ ++ V L
Sbjct: 575 KIPH-YVLFVDSYPLTVSGKIKKNILKETVEKKL 607
>gi|119718356|ref|YP_925321.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119539017|gb|ABL83634.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 554
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 142/320 (44%), Gaps = 48/320 (15%)
Query: 10 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
V +P+FE L+ +E ++TVP I+ +A L + + S++ I+ GG +
Sbjct: 264 QVVVPQFEPGLVLDLIENEGGNLIVTVPTIL--IALLDHPDRPSRDLSSMRTIMCGGAKV 321
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
P +L++ TN +G E LT P Q
Sbjct: 322 PEDLVRR-TNEIVGCDFSILFGQAEMHGVLT--------------------QSLPTDSPQ 360
Query: 130 PQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
Q +G P HVE+KV + G I RG M Y+ A + +
Sbjct: 361 DQATTLGIPLVHVEVKVADPVTGEPVPIGQPGEICARGYQTMREYFRMDEATAATIDRDG 420
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL +GD+G++D+ G + + GR I GGEN++P E+E +L+ HPGI + V+GI ++
Sbjct: 421 WLRSGDVGTMDERGYLQIAGRIKDIIIRGGENIHPLEIEELLIHHPGIAEVAVIGIPDSH 480
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A VR + ++E L +CR +L FK P+L+
Sbjct: 481 WGEQVAAVVRANGAPP-----------------TAEELHAYCR-ASLAPFKTPKLWYFVD 522
Query: 304 KPFPLTSTGKIRRDEVRREV 323
+ FP+T +GKIR+ E+R V
Sbjct: 523 E-FPMTPSGKIRKVELRSGV 541
>gi|29828572|ref|NP_823206.1| AMP-binding domain protein [Streptomyces avermitilis MA-4680]
gi|29605676|dbj|BAC69741.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 540
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 143/324 (44%), Gaps = 48/324 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV++ TSL VP + +A L S++ +
Sbjct: 249 GACIVLPAPSFDPAATLAAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 306
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE--------------- 350
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ VG+ PH+E+KV G + TRG VML YWD+
Sbjct: 351 --HRTG--TVGRVLPHIEVKVVDPAGGVTVPRGTAGELCTRGYSVMLGYWDEPEKTAEAV 406
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 407 DAGRWMHTGDLAVMRENGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGV 466
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV R+ + E L C + L +K P RL
Sbjct: 467 PHERYGEEVLACVIPRDPADPP---------------TLEELWAFC-DGQLAHYKIPSRL 510
Query: 299 FVLWRKPFPLTSTGKIRRDEVRRE 322
+L FP+T +GK+R+ E+R +
Sbjct: 511 RIL--DSFPMTVSGKVRKIELREQ 532
>gi|402300945|ref|ZP_10820380.1| long-chain-fatty-acid--CoA ligase [Bacillus alcalophilus ATCC
27647]
gi|401723932|gb|EJS97344.1| long-chain-fatty-acid--CoA ligase [Bacillus alcalophilus ATCC
27647]
Length = 569
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 49/318 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V +P+F K L+ +++ VT P + A L+ K S+K +
Sbjct: 274 VMNGFTSVLLPRFNVKDVLKTIDKQKVTLFPGAPTMYR--AILLDPTKDNYDLSSIKACI 331
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP + +E KL+ YG+TET+ P A N+
Sbjct: 332 SGAAALPLD-TQEKFEKVTGGKLVEGYGLTETA-------------------PVALANLI 371
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
+ + +G P P E+ + DG VG + RG VM YW+ +
Sbjct: 372 WG---KRKSGSIGVPWPDTEVAIIKPDGEQADVKEVGEVAVRGPQVMKGYWNHPVETEKT 428
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G+ WL TGD+G +D+ G ++V R+ I +GG N+YP E+E VL +H + + ++G
Sbjct: 429 FLGD-WLLTGDMGYMDEEGFFYIVDRKKDMIIAGGFNIYPREIEEVLFEHEAVGDVAIIG 487
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+A+ E V A V ++ + +E D +HCR K+L +K PR+
Sbjct: 488 VADEYRGETVKAFVVKKDGYNPTEKELD----------------EHCR-KHLAAYKVPRI 530
Query: 299 FVLWRKPFPLTSTGKIRR 316
+ +R P T GK+ R
Sbjct: 531 YE-FRDELPKTLIGKVLR 547
>gi|228914550|ref|ZP_04078159.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228844869|gb|EEM89911.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 496
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P+ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPAELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP + + + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLAKVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IIFLKELPKNATGKIQKAQLTNQLKS 495
>gi|221069244|ref|ZP_03545349.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220714267|gb|EED69635.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 587
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LEAV+ T L VP + +A L + +++ + G P E+MK
Sbjct: 302 FDPITVLEAVQAEKCTGLHGVPTMF--IAELDHPRFAEFDLSTLRTGIMAGSPCPIEVMK 359
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ + D LE + V
Sbjct: 360 RVVRDMHLSEITIAYGMTETSP-VSCQSDADTPLEK-------------------RVATV 399
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+E+K+ + + G + TRG VM YWD E W+ TGD
Sbjct: 400 GKVQPHLEVKIVDPSTGEIMAPGQSGELCTRGYSVMHGYWDDEARTREAIDAEQWMHTGD 459
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR + GGEN+YP E+E L +HP + + VVG+ + R E +
Sbjct: 460 LATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEELC 519
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V ++ + E +R C+ + + +K PR ++ + + FP+T
Sbjct: 520 AWVIVKPGLELGEDE----------------VRDFCKGQ-IAHYKVPR-YIRFVQAFPMT 561
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R E++ L
Sbjct: 562 VTGKIQKFRIRDEMIELL 579
>gi|52143488|ref|YP_083341.1| acyl-CoA synthetase [Bacillus cereus E33L]
gi|51976957|gb|AAU18507.1| AMP-binding protein [Bacillus cereus E33L]
Length = 496
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E ++ + + VG +L RG +VM YW++ A +
Sbjct: 319 ------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG + + E+ +A + K+ +L+ +V+ +HCR L +K P
Sbjct: 425 VGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K FP +TGKI++ ++ ++ S
Sbjct: 468 KE-IVFLKEFPKNATGKIQKAQLTNQLKS 495
>gi|239820536|ref|YP_002947721.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805389|gb|ACS22455.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 545
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 145/328 (44%), Gaps = 50/328 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + G+ +V FE ++ + A+ VP + +A L K+ +++
Sbjct: 248 LGCVTTGSTYVLPLLFEPETLMRAIALERCDVFYGVPTM--QIAMLDHPKRDQYDLSTLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++GG +P EL+ F L++ YG TE S +++
Sbjct: 306 VAISGGAPVPPELLHRIETGF-HCDLLTLYGQTECSPTISM------------------- 345
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
V PN + + VG+P P VE+++ S G I RG ML Y++
Sbjct: 346 -VGPNDNQEDKATTVGQPLPQVEIRIADPASGKTQSVGAEGEIEVRGPQCMLGYFEMPEE 404
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+G++D G + + GR I GGEN+YP EVEA L++H +
Sbjct: 405 TAQTMRPDGWLRTGDLGTLDRRGYLRVTGRLKDMIIRGGENIYPAEVEARLMEHATVAMA 464
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VV GI +AR E+V A V++R L ++E LR HC L+
Sbjct: 465 VVFGIPDARWGEVVGAAVQIRAGMP---------------LPAAEALRAHC----LSMLA 505
Query: 295 APRLFVLWR--KPFPLTSTGKIRRDEVR 320
+L +W FPLT++GK+++ +R
Sbjct: 506 PQKLPTVWFSCDAFPLTASGKVQKFRLR 533
>gi|381187508|ref|ZP_09895072.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
gi|379650636|gb|EIA09207.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Flavobacterium frigoris PS1]
Length = 559
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 48/319 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++++ L+A+ + T+L VP + A L + S++ + G P+ELMK
Sbjct: 278 FDAETTLKAISEEKATALYGVPTMF--FAELDHPNRKKYDLSSLRTGIMAGSLCPTELMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++ YGMTETS L+ T +D + E + V
Sbjct: 336 KVQSEMNLTEMGIGYGMTETSP-LSTQTRHDTSFEK-------------------RVSTV 375
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTG 188
GK PH E+K+ + V G + TRG VML YW D K S+ + W+ +G
Sbjct: 376 GKILPHTEIKIIHPETHQVVPIGETGELCTRGYCVMLGYWNDPVRTKESIDSAG-WMHSG 434
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +D+ G + +VGR I GGEN+YP+ +E L H I + V GI + +L E V
Sbjct: 435 DLAIMDNEGYINIVGRIKDMIIRGGENIYPKVIEEFLYTHENIKEVSVFGIPDEKLGEQV 494
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
++++++++ +E ++++CR K + + P +V + FP+
Sbjct: 495 CVWIQMQDNYKLTELE----------------VKEYCRGK-IAHYTIP-YYVKFVHEFPM 536
Query: 309 TSTGKIRRDEVRREVMSHL 327
T TGKIR+ E+R + L
Sbjct: 537 TVTGKIRKVEMREAMKEEL 555
>gi|389784070|ref|ZP_10195267.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
gi|388433827|gb|EIL90786.1| acyl-CoA synthetase [Rhodanobacter spathiphylli B39]
Length = 558
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 149/334 (44%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A + GAC V IP F++ + L+ V + T L VP + +A L + S
Sbjct: 264 LACVTHGACMV-IPGEGFDALTTLQCVAEERCTGLHGVPTMF--IAELEHPRFGEFDLSS 320
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ A + AYGMTETS ++F T+ D LE
Sbjct: 321 LRTGIMAGSPCPIEVMRRVVGEMHMADVTIAYGMTETSP-VSFQTVPDDPLER------- 372
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
+ VG+ P +E+K+ + V G + TRG VML YWD
Sbjct: 373 ------------RVDSVGRIHPQLEVKLVDEAGQVVPRGTPGELCTRGYSVMLGYWDDPA 420
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V W+ TGD+ ID G +VGR I GGENVYP E+E L HP +
Sbjct: 421 RTAEVIDEARWMHTGDLAVIDADGYCSIVGRLKDMIIRGGENVYPREIEEFLYGHPKVRD 480
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + LR+ S + ++ HCR +L +
Sbjct: 481 VQVFGVPDPKFGEQVCAWIVLRDGVSASVAE----------------IQDHCRH-HLAYY 523
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P +V + FP+T TGKI++ +R + + L
Sbjct: 524 KVPH-YVRFVDAFPMTVTGKIQKYLMRDAMAAEL 556
>gi|357040353|ref|ZP_09102141.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356706|gb|EHG04490.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 516
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 158/328 (48%), Gaps = 42/328 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M GA ++ + KF +S LE +++ VT+ P ++ L + S++
Sbjct: 218 MCHFYSGATNIIMEKFNPQSILETIQKEKVTNFWAAPTMINMLIKYPEFARY--DLSSLR 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I G +P L+KE + K I YG+TE LT + D E P + + G
Sbjct: 276 QIAYSGAPMPVPLLKECL-ALIGPKFIQMYGLTEAGPHLTSLAQEDHVAEGPPEKVRRLG 334
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+V GK + +++V ++ VG I+ +G ++M YW+ L K
Sbjct: 335 SV-------------GKEVLNTQVRVVNERGEDVAPGEVGEIIGKGDNIMQGYWN--LPK 379
Query: 176 PSV-STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + WL TGD+ ++D+ G +++V + I SGGEN+YP+E+E V+ +HP ++
Sbjct: 380 ATAEALRDGWLYTGDLATVDEDGYIYIVDCKKDMIISGGENIYPKELENVIYEHPAVLEA 439
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ + E+V+A + L++ Q +E E + ++C+ KNL +K
Sbjct: 440 AVIGLPDTHWGELVMALIVLKQGQQVTE----------------EEIIEYCK-KNLASYK 482
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRRE 322
P+ V + P +GK+ + +R++
Sbjct: 483 KPKR-VKFIDELPKNPSGKVLKTVLRQK 509
>gi|407797844|ref|ZP_11144760.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
gi|407017844|gb|EKE30600.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
Length = 544
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 46/326 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA V I +FE K L+AV+ T+L VP + +A L + D+++
Sbjct: 251 ATVAKGATMVVIEQFEPKLVLQAVKDEACTALHGVPTMF--IAELNHPEFENLKPDTLRT 308
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ G P E+MK N ++ AYG TE+S +T
Sbjct: 309 GIMAGSTCPMEVMKSVINEMGVEEITIAYGQTESSPVIT--------------------Q 348
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 175
P+ + VG+ P+VE+KV + G + TRG VM Y+ +
Sbjct: 349 TRPDDPIDLRVKSVGRAHPNVEVKVVEPATGEEAERGMPGELCTRGYLVMEGYYKDEEST 408
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + WL TGDI +D+ G V + GR I GGEN+YP E+E L QHP ++ +
Sbjct: 409 ETAIDPDGWLHTGDIAEMDENGYVEITGRMKDMIIRGGENIYPREIEEFLYQHPDVLDVQ 468
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVGI +A E ++A W + + + S K+ E+ + K
Sbjct: 469 VVGIPDATYGEEIMA-------WIIPKEDSEVSEKDIRAFFEGEISKH----------KI 511
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
P ++ + +P+T++GKI++ ++R
Sbjct: 512 P-AYIYFTDEYPMTASGKIQKFKLRE 536
>gi|379707710|ref|YP_005262915.1| putative fatty-acid-CoA ligase [Nocardia cyriacigeorgica GUH-2]
gi|374845209|emb|CCF62273.1| Putative fatty-acid-CoA ligase [Nocardia cyriacigeorgica GUH-2]
Length = 513
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 143/325 (44%), Gaps = 55/325 (16%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMA------DLATLIRVKKTWKGRDSV 59
+G V +P + + + AV ++ ++TVPA+ A D AT W G
Sbjct: 230 LGGTSVIMPGRDVPAMIAAVPAERISFIVTVPAMYALMLRQPDFATTDVSVVRWVGY--- 286
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
GG + L++ +FP A + + YGMTET+S +T +
Sbjct: 287 -----GGAPIAPSLVRAVQAAFPAATVFNGYGMTETASLMTLL----------------- 324
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P++ VG P V L V DG VG +L RGA+V YWD+ A S
Sbjct: 325 ----PDADAVDHADSVGYAVPSVRLAVAPIDGDPSVGELLARGANVTGGYWDRPEATESA 380
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
WL TGD+ +D+ G V +V R I GGENV EVEA LL P + V+
Sbjct: 381 RMAG-WLRTGDVVRVDEAGRVHIVDRIKDIINRGGENVSSVEVEAALLAAPQVADAAVLA 439
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A + D S + E +L+ HCRE+ L FK P+
Sbjct: 440 VPDDVMGEKVGAVL-----------FSDDSEIDIEAVLA------HCREQ-LADFKVPQY 481
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREV 323
+ +P P + GK+ + ++R++V
Sbjct: 482 VTVVDEPLPRNAGGKLLKAQLRQQV 506
>gi|184201926|ref|YP_001856133.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183582156|dbj|BAG30627.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 540
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 145/321 (45%), Gaps = 45/321 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++AL AV Q TSL VP + +A L +++ + G P E+
Sbjct: 256 PGFDPRAALRAVAQERATSLYGVPTMF--IAELELPDFGDYDLSTLRTGVMAGSPCPMEV 313
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + +++ YGMTETS P +F + +S+ + G
Sbjct: 314 MRKVISEMHMSEVAICYGMTETS-------------------PVSFQTRSDDSLDRRVG- 353
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PHVE+K+ + G TRG VM YW Q E WL T
Sbjct: 354 TVGRVHPHVEVKIVDPSTGETVPRGQAGEFCTRGYSVMKGYWGQEEKTREAIDPEGWLHT 413
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI +D+ G + GR + GGEN+YP EVE L HP ++ V+G+ + + E
Sbjct: 414 GDIAVMDEDGYAQITGRIKDMVIRGGENIYPREVEEFLYTHPDVVDAQVIGVPSEKYGEE 473
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++ +RLR+ L++E + + K ++ K PR +V + FP
Sbjct: 474 LMVWLRLRDGAP---------------ALTAEAILEFADGK-ISRHKIPR-YVHVVEEFP 516
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
+T TGK+R+ E+R E + L
Sbjct: 517 MTVTGKVRKVEMREEALKLLD 537
>gi|339327543|ref|YP_004687236.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
gi|338167700|gb|AEI78755.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
Length = 557
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 50/333 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGAC VF + F+ + ++A + T+L VP + +A L + + ++
Sbjct: 264 LACVSVGACMVFPGEAFDPLATMQAASEERCTALHGVPTMF--IAQLDHPEFSRFDFSTL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK +++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPIEVMKRVVADMHMSEVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E KV + G + TRG VM YW D
Sbjct: 363 QSATDDPLDK-RVATVGRVQPHLECKVVDALGEVVPTGATGELCTRGYSVMQGYWEDDER 421
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP +
Sbjct: 422 TREAIRDG--WMHTGDLATIDDKGYCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQA 479
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ QS+ E +R CR++ + +
Sbjct: 480 VQVFGVPDQKYGEEVCAWIVLKPG---------QSATEDE-------IRTFCRDQ-IAHY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
K PR ++ + P+T TGK+++ V R+ M H
Sbjct: 523 KIPR-YIRFVSEMPMTVTGKVQK-FVMRDTMIH 553
>gi|299529445|ref|ZP_07042882.1| AMP-binding domain protein [Comamonas testosteroni S44]
gi|298722308|gb|EFI63228.1| AMP-binding domain protein [Comamonas testosteroni S44]
Length = 582
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LEAV+ T L VP + +A L + +++ + G P E+MK
Sbjct: 297 FDPITVLEAVQAEKCTGLHGVPTMF--IAELDHPRFAEFDLSTLRTGIMAGSPCPIEVMK 354
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ + D LE + V
Sbjct: 355 RVVRDMHLSEITIAYGMTETSP-VSCQSDADTPLEK-------------------RVATV 394
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+E+KV + + G + TRG VM YW+ E W+ TGD
Sbjct: 395 GKVQPHLEVKVVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTGD 454
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR + GGEN+YP E+E L +HP + + VVG+ + R E +
Sbjct: 455 LATMDGEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPNVQDVQVVGVPDVRYGEELC 514
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A + ++ + E +R+ C+ + + +K PR ++ + + FP+T
Sbjct: 515 AWIIVKPGLELGEDE----------------IREFCKGQ-IAHYKVPR-YIRFVQAFPMT 556
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R E++ L
Sbjct: 557 VTGKIQKFRIRDEMIELL 574
>gi|429335406|ref|ZP_19216036.1| AMP-binding domain protein [Pseudomonas putida CSV86]
gi|428759890|gb|EKX82174.1| AMP-binding domain protein [Pseudomonas putida CSV86]
Length = 557
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 143/319 (44%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L + ++ ++ + G P E+M+
Sbjct: 278 FDPALTLQAVAEERATALYGVPTMF--IAVLDQPQRADHDLSCLRTGIMAGAICPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS ++ T D LE VT V
Sbjct: 336 RVINELHMSEVQIAYGMTETSP-VSLQTGPDDELEL---------RVT----------TV 375
Query: 136 GKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ C +G + TRG VML YW A W+ TGD+
Sbjct: 376 GRTQPQLESKIIDEHGCVVPRGQIGELCTRGYSVMLGYWGNPAATAEAIDPAGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S+D+ G V + GR I GGEN+YP E+E HP + + V+GI + R E +VA
Sbjct: 436 ASMDEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ + E L+ C+ + + FK PR F + FP+T
Sbjct: 496 ---------WIKFHPGHSATDVE-------LQAWCKNR-IAHFKTPRHFRFVEE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + L+
Sbjct: 538 TGKVQKFRMREISIEELRQ 556
>gi|440695436|ref|ZP_20877976.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
gi|440282494|gb|ELP69941.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
Length = 475
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 145/320 (45%), Gaps = 50/320 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L+ GA + +P F+ LE VE+ VT L P + L + S++
Sbjct: 206 IASLIRGATILPVPVFDVDRVLELVEREKVTVLPGPPTLYHSLLA----AGDRRDLSSLR 261
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ + P +++ YG+TE + T PG +F
Sbjct: 262 VAVTGSADIPVELIRRIVHDLPFQHIMTGYGLTEAGTV---------TASRPGD---SFE 309
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ VG P VE+ V DG +L RG VM Y D A
Sbjct: 310 DIA---------TTVGTPCDGVEVSVADDGE-----VLVRGYSVMRGYLDDPAATAETID 355
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G++D+ G++ +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 356 ADGWLHTGDLGTLDERGHLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVP 415
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A V + + D EL+ S + GFKAPR FV
Sbjct: 416 DERLGQVGKAFV-----VRAGDVTAD------ELIAWSRA--------RMAGFKAPR-FV 455
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ + PL +TGK+ +D++R
Sbjct: 456 EFLEELPLNATGKVMKDQLR 475
>gi|399003457|ref|ZP_10706121.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
gi|398122936|gb|EJM12517.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM18]
Length = 564
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 145/320 (45%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLTTVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCPRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSL 330
TGKI++ +R + LK++
Sbjct: 544 TGKIQKFRMREISIEELKAM 563
>gi|410455900|ref|ZP_11309772.1| AMP-binding domain protein [Bacillus bataviensis LMG 21833]
gi|409928720|gb|EKN65820.1| AMP-binding domain protein [Bacillus bataviensis LMG 21833]
Length = 545
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 148/335 (44%), Gaps = 46/335 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA + VGA V + +F K L+ V+ T L VP + +A L +++
Sbjct: 251 MASVSVGATMVPVQEFSPKRVLQTVQDEKCTGLHGVPTMF--IAELNDPDFDKFDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK ++ AYG TE+S + DP
Sbjct: 309 TGIMAGSNCPIEVMKAVIEKMGATEITIAYGQTESSPVIMQTRTNDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ + VGK P+VE+K+ G+ G + TRG HVM Y+ A
Sbjct: 357 --------ELRVETVGKALPNVEVKIVEPGTDREVGYGVQGELCTRGYHVMKGYYKNITA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ +D+ G + GR I GGEN+YP E+E L HP ++ I
Sbjct: 409 TNEAIDAEGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYSHPKVLDI 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+GI + E V+A + L+E ++E L++ C + ++ K
Sbjct: 469 QVIGIPDEVYGEEVMAWIILKEGET----------------ATAEELKEFCLGR-ISKHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
PR ++ + +P+T++GKI++ +R + + +K+
Sbjct: 512 IPR-YIKFTDAYPMTASGKIQKFRLREKAIEMVKN 545
>gi|430756205|ref|YP_007209465.1| hypothetical protein A7A1_0713 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020725|gb|AGA21331.1| Hypothetical protein YngI [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 549
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP I+ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|331699394|ref|YP_004335633.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326954083|gb|AEA27780.1| Long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 554
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++ L AV Q TSL VP + +A L S++ + G P E+MK
Sbjct: 265 FDPEATLRAVAQERCTSLYGVPTMF--IAELNHPDFASYDLSSLRTGIMAGSPCPVEVMK 322
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++ YGMTETS ++ T D ++E + V
Sbjct: 323 QVVDRMGMTEVTICYGMTETSP-VSTQTRADDSVER-------------------RVSTV 362
Query: 136 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+KV + G + TRG VML YW+Q W+ TGD
Sbjct: 363 GRVHPHVEVKVVDPETGLTVPRGQAGELCTRGYSVMLGYWEQPDKTAESIDAARWMHTGD 422
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D G + + GR + GGENVYP E+E L HP ++ V+G+ + + E +
Sbjct: 423 LAVMDSDGYLNITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDIKYGEELC 482
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR+ + L++E +R+ K L +K PR +V+ FP+T
Sbjct: 483 AWVKLRDGVEG---------------LTAEQVREFATGK-LAHYKIPR-YVIVVDEFPMT 525
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+R+ E+R + + L
Sbjct: 526 VTGKVRKVEMREKSVELL 543
>gi|212638410|ref|YP_002314930.1| acyl-CoA synthetase [Anoxybacillus flavithermus WK1]
gi|212559890|gb|ACJ32945.1| Acyl-CoA synthetase [Anoxybacillus flavithermus WK1]
Length = 558
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 147/325 (45%), Gaps = 49/325 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G + +PKF+ ++ L+ +E+ T P I L +KK S+K +
Sbjct: 271 IMEGYKMILLPKFDVETTLKTIEKQRPTLFPGAPTIYIALLNHPNLKKY--DLSSIKICI 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + K+I YG+TE S ++D G
Sbjct: 329 SGSAPLPVEV-QEQFETVTGGKIIEGYGLTEASPVTHSNFIWD-------------GKRI 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS------DGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
S +G P P E + S + +G I+ RG VM YW++ + +
Sbjct: 375 KGS--------IGVPWPDTEAMIVSLETGEKANVNEIGEIVVRGPQVMKGYWNR-PEETA 425
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + WL TGD+G +++ G ++V R+ I + G NVYP EVE VL +HP + VV+
Sbjct: 426 ATLRDGWLYTGDLGYMNEEGYFFVVDRKKDMIIASGYNVYPREVEEVLYEHPKVQEAVVI 485
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ +A E V A + L+E Q +E DQ ++K L +K PR
Sbjct: 486 GVPDAYRGETVKAFIVLKEGEQCTEEELDQFMRSK-----------------LAAYKVPR 528
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
++ +RK P T+ GKI R + E
Sbjct: 529 IYE-FRKELPKTAVGKILRRALVEE 552
>gi|153005842|ref|YP_001380167.1| AMP-binding domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152029415|gb|ABS27183.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 546
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 143/318 (44%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE ++ + V++ TSL VP + +A L + S++ + G P E+MK
Sbjct: 258 FEPRAVMRTVQEERCTSLYGVPTMF--IAELEHPEFASFDFSSLRTGIMAGSPCPIEVMK 315
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS T + DP + V
Sbjct: 316 RVQRDMHMPEVTICYGMTETSPVSTQSRVNDPL--------------------DKRVSTV 355
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PHVE+K+ + V G + TRG VML YWD A + W+ TGD
Sbjct: 356 GQVHPHVEIKIVDPTTGRVVPRGAPGELCTRGYSVMLGYWDDAAATRAAIDAGRWMHTGD 415
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR + GGENV+P EVE L PGI + V+G+ +A+ E ++
Sbjct: 416 LATLDAEGYVKIVGRIKDMVLRGGENVFPREVEEFLYTIPGISDVQVIGVPDAKYGEELM 475
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+LR + L E +R+ CR K T +K PR + + FP+T
Sbjct: 476 AWVKLRPG----------------VTLDGEAIRRLCRGKIAT-YKIPRYY-KFVDAFPMT 517
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+++ +R + L
Sbjct: 518 VTGKVQKFRMRELAIREL 535
>gi|354478459|ref|XP_003501432.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Cricetulus griseus]
gi|344252178|gb|EGW08282.1| Acyl-CoA synthetase family member 2, mitochondrial [Cricetulus
griseus]
Length = 615
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 46/321 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F K ALEA+ + T L P + D+ L + + S++ + G P EL
Sbjct: 334 PSFNGKKALEAISREKGTLLYGTPTMFVDV--LNQPDFSSYDFSSIRGGVIAGSPAPPEL 391
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
++ N +L+ YG TE +S +TFM + TLE +
Sbjct: 392 IRAIINKMNMKELVVVYGTTE-NSPVTFMNYPEDTLEQKAE------------------- 431
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH E ++ + + + G + RG VM YW + + W T
Sbjct: 432 SVGRIMPHTEAQIVNMETGELTKLNTPGELYIRGYCVMQGYWGEPQKTFETVGQDKWYRT 491
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI ++D+ G +VGR I GGEN+YP E+E +HP + + VVG+ + R+ E
Sbjct: 492 GDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEVQVVGVKDQRMGEE 551
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ AC+RL+ +E E ++ C+ K ++ FK PR ++++ +P
Sbjct: 552 ICACIRLKSGETTTE----------------EEIKAFCKGK-ISHFKIPR-YIVFVDNYP 593
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
LT +GKI++ +R ++ HLK
Sbjct: 594 LTISGKIQKFRLREQMEQHLK 614
>gi|120402570|ref|YP_952399.1| AMP-binding domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955388|gb|ABM12393.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 538
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L+ +E T++ VP + +A + S++ + G P E+
Sbjct: 256 PGFDPGQTLKTIETERCTAVYGVPTMF--IAMQNHADFAERDLSSLRTGIMAGAVCPVEV 313
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK +++ AYGMTETS ++ TL D LE +
Sbjct: 314 MKRCVEEMNMSEISIAYGMTETSP-VSCQTLIDDDLER-------------------RTS 353
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + HV G TRG VML YW + W+ T
Sbjct: 354 SIGRVHPHVEIKIVDPDTGHVVERGTPGEFCTRGYSVMLGYWRDEEKTAQAVDADGWMHT 413
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + G +VGR + GGEN+YP EVE L HP I VVG+ +AR E
Sbjct: 414 GDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREVEEFLYTHPDIEDAQVVGVPDARYGEE 473
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R+R + L + +R+ K L +K PR +V FP
Sbjct: 474 ICAWIRMRPGRR---------------ALDAAAVREFAAGK-LAHYKIPR-YVHVVDEFP 516
Query: 308 LTSTGKIRRDEVR 320
+T TGKIR+ E+R
Sbjct: 517 MTVTGKIRKVEMR 529
>gi|398996416|ref|ZP_10699273.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398126947|gb|EJM16368.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 565
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + K+ S++ + G P E+M+
Sbjct: 284 FDPLLTLATVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N ++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMNEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGENVYP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVNIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|170720998|ref|YP_001748686.1| AMP-binding domain-containing protein [Pseudomonas putida W619]
gi|169759001|gb|ACA72317.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 560
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 147/322 (45%), Gaps = 45/322 (13%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+++ L AV + + L VP + +A L + +++ + G P E+M+
Sbjct: 278 FDAELTLRAVAEERASILYGVPTMF--IAMLDHPSRQHLDLSTLRSGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS ++ T D LE VT V
Sbjct: 336 RVIDQLHMAQVQIAYGMTETSP-VSLQTGPDDDLEL---------RVT----------TV 375
Query: 136 GKPAPHVELK-VCSDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K V +DG +G + TRG VML YWD A W+ +GD+
Sbjct: 376 GRTQPHLETKLVNADGCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D G+V +VGR I GGEN+YP E+E HP + V+GI R E VVA
Sbjct: 436 AVMDADGHVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCDRYGEEVVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++L ++E L+ C+ + + +K PR F + FP+T
Sbjct: 496 WIKLHPGHS----------------ATAEELQGWCKAR-IAHYKVPRHFCFVDE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKSLPS 332
TGK+++ ++R + L ++P+
Sbjct: 538 TGKVQKFKMREISAATLSAVPA 559
>gi|2266424|emb|CAA74222.1| yngI [Bacillus subtilis subsp. subtilis str. 168]
Length = 523
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T L VP + +A L +++
Sbjct: 225 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTVLHGVPTMF--IAELHHPDFDAYDLSTLR 282
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 283 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 322
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 323 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDA 382
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L QHP ++ +
Sbjct: 383 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 442
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 443 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 485
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 486 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 514
>gi|350266151|ref|YP_004877458.1| hypothetical protein GYO_2194 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599038|gb|AEP86826.1| YngI [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 549
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 149/336 (44%), Gaps = 46/336 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T +D L
Sbjct: 309 TGIMAGSPCPSEVMKAVIEKMGMKDITIAYGQTEASPVITQTRAHDSFLR---------- 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+ G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 359 ----------RVETTGRALPHAEVKIVEPGTCQEVQRGVQGELCTRGYHVMKGYYKDEEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E E L +HP I+ +
Sbjct: 409 TRKAINPDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPRETEEFLYRHPYILDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ S E ++ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKT----------------ASPEEIKDYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
PR +V++ +P+T++GKI++ ++R + + L
Sbjct: 512 IPR-YVIFTDEYPMTASGKIQKYKLREKTIEMFNLL 546
>gi|423606283|ref|ZP_17582176.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
gi|401241839|gb|EJR48217.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
Length = 496
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALMNCEKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARCKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E ++ + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 AIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ V + P +TGKI++ ++ ++ S
Sbjct: 468 KEIVFLEE-LPKNATGKIQKAQLANQLKS 495
>gi|407642609|ref|YP_006806368.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
gi|407305493|gb|AFT99393.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
Length = 515
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 145/329 (44%), Gaps = 57/329 (17%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
+V A HVF+P F L+A+ H VT+++ VP ++ L V V+ +
Sbjct: 223 LVNASHVFVPMFTPGGVLQAIGAHGVTNMLLVPTMIQLLVDDPAVADF--DLSGVRTVTY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM---TLYDPTLETPGQLPQAFGN 121
G + ++ A FP A AYGMTE + T + DP L
Sbjct: 281 GASPISEAVLGRARKVFPMAGFTQAYGMTELAPVATLLGPAEHDDPVLRR---------- 330
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
G+ PHVE+++ + V G ++ RG +VML YW+ +P
Sbjct: 331 ------------SAGRATPHVEVRIVDADDNEVPRGEVGEVVVRGDNVMLGYWN----RP 374
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ V W+ TGD G +D+ G V++V R I +GGENVY EVE L H +
Sbjct: 375 EDTAAAVRDGWMHTGDGGRMDEHGYVFIVDRLKDMIITGGENVYSAEVENALAAHAAVAS 434
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + E V A V L Q +E E LR HC+ + G+
Sbjct: 435 CAVIGVPDDEWGERVHAVVVLLPGAQAAE----------------EELRAHCKSL-IAGY 477
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
KAPR V + + P++ GKI + E+RR+
Sbjct: 478 KAPRT-VEFAEALPVSGAGKILKRELRRK 505
>gi|440910486|gb|ELR60280.1| Acyl-CoA synthetase family member 2, mitochondrial [Bos grunniens
mutus]
Length = 635
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + + L P + D+ + + D
Sbjct: 340 MVSLMHGVTLILCSPVFEGKKTLEAISRERGSFLYGTPTMFVDVLN----QPDFSSYDIS 395
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 396 TMRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 436
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 437 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGE 495
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI +D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 496 PQKTEEAIGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 555
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 556 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 598
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 599 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 633
>gi|56476570|ref|YP_158159.1| ADP-producing CoA ligase, feruloyl-CoA synthetase [Aromatoleum
aromaticum EbN1]
gi|56312613|emb|CAI07258.1| putative ADP-producing CoA ligase,similar to feruloyl-CoA
synthetase [Aromatoleum aromaticum EbN1]
Length = 510
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 144/327 (44%), Gaps = 53/327 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
L GA V PKF++ + +A+EQ +T + VPA + ++ + W+ D S++
Sbjct: 221 LSAGATVVLHPKFDADATFDAIEQERITLTVLVPAQL----EMMIARPRWQSADLSSLRM 276
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
I G +P L++E L+ YG TET +
Sbjct: 277 ITTGSTIVPERLIREVHRR--GVPLVQIYGSTETCPIAAY-------------------- 314
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
V P + G G+ APH L++ D V G IL RG +VM YW+ A
Sbjct: 315 VKPADAQRKAG-SAGRAAPHCSLRIVGDDGHDVKPGATGEILVRGPNVMNAYWNDLQASA 373
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+V + W TGD+G D G +W+ GR+ I SGGEN+YP E+E +L + P I + V
Sbjct: 374 AV-LKDGWFRTGDMGHQDGEGYLWVDGRKKEMIISGGENIYPAEIENLLGESPDIAEVAV 432
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG RL E W + + L + VL+ E + +K P
Sbjct: 433 VG--------------RLDERWGEVVVAVVVPLEGRT-LDAGHVLQ--LLEGRIARYKLP 475
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ V + P T+ GK+R+D+VR+ V
Sbjct: 476 KEVVFLDE-LPRTALGKVRKDDVRQLV 501
>gi|418033002|ref|ZP_12671480.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351470206|gb|EHA30365.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 549
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTVLHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L QHP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|410452868|ref|ZP_11306831.1| long-chain-fatty-acid--CoA ligase [Bacillus bataviensis LMG 21833]
gi|409934036|gb|EKN70954.1| long-chain-fatty-acid--CoA ligase [Bacillus bataviensis LMG 21833]
Length = 549
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 150/331 (45%), Gaps = 53/331 (16%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
G + IP+FE+K+ LE +++ VP + + +V+ G + + G
Sbjct: 258 GYKQIIIPRFETKTVLELIQKQPPFLFFGVPTMFTAMLHFPKVESY--GIEKITGFFCGS 315
Query: 67 GGLPSELMKEATNSFPKAKLIS-AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
LP E+ + IS YG++E +S TL +P T G+V
Sbjct: 316 SPLPQEIYDKFKKLMGAGTYISDGYGLSEATSG----TLSNPYTRT------KLGSV--- 362
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV--------GRILTRGAHVMLRYWDQFLAKPS 177
G P P E+ + + + + G IL RG VM YW+ + +
Sbjct: 363 ----------GIPIPKTEVMIGIEQDTGIVEAPVGMRGEILVRGPQVMKGYWNN-SEETA 411
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ E WL TGDIG +D+ G ++V R+ I + G NVYP E+E V+ Q P + +VV+
Sbjct: 412 AALKEGWLHTGDIGYMDEEGYFYVVDRKKDMIIASGYNVYPREIEDVIYQIPDVREVVVI 471
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + E V A + L+ KE +L+ + Q CRE NL +K P+
Sbjct: 472 GIPDEYRGETVKAYISLK----------------KEQMLTEADIIQFCRE-NLAAYKVPK 514
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+ + +R P ++ GK+ + E+R + ++ ++
Sbjct: 515 M-IEFRDELPKSAVGKLLKRELRDQELAKMQ 544
>gi|126436701|ref|YP_001072392.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126236501|gb|ABN99901.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 497
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 159/333 (47%), Gaps = 43/333 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ +F+ + + V VT+ VP ++ + ++ + S++
Sbjct: 199 LSNLYAGRTIVYLRRFDPREWVRLVRTEKVTTATVVPTMLDRIVAVLEEEPVEL--PSLR 256
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
GG + L+++A + P+ ++AYG+TETSS++ +T D L G +A
Sbjct: 257 NFAYGGSKVAQPLVRKALDLLPQVGFVNAYGLTETSSTIAVLTPEDHRLAH-GARDEAVA 315
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+ VG+P P +E+++ ++ G + G + RG V RY +
Sbjct: 316 R---------RLSSVGRPVPGIEVQIRAEDGTVLGPNETGELFVRGPQVSGRYAEIG--- 363
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV E W T DI ++DD G +++ GR + I GGEN+ P E+E VL++HP + +V
Sbjct: 364 -SVLDAEGWFPTRDIATLDDDGYLFIGGRSDDTIIRGGENIAPSEIEEVLVEHPHVREVV 422
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ + +++VA V E + +E LR R K L G +
Sbjct: 423 VVGMDDPEWGQIIVAVV-------VPEPGAEP---------MAEELRDFAR-KTLRGSRT 465
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P V +R P T+TGK+ +RRE++ LK
Sbjct: 466 PDRIV-FRDQVPTTATGKV----LRREILDDLK 493
>gi|16078886|ref|NP_389707.1| AMP-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|221309716|ref|ZP_03591563.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. 168]
gi|221314038|ref|ZP_03595843.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221318960|ref|ZP_03600254.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221323234|ref|ZP_03604528.1| acyl-CoA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402776071|ref|YP_006630015.1| acyl-CoA synthetase [Bacillus subtilis QB928]
gi|452913908|ref|ZP_21962535.1| AMP-binding enzyme family protein [Bacillus subtilis MB73/2]
gi|81669033|sp|O31826.1|YNGI_BACSU RecName: Full=Putative acyl-CoA synthetase YngI
gi|2634208|emb|CAB13708.1| putative acetoacetyl-CoA synthetase [Bacillus subtilis subsp.
subtilis str. 168]
gi|402481252|gb|AFQ57761.1| Putative acyl-CoA synthetase [Bacillus subtilis QB928]
gi|407959240|dbj|BAM52480.1| AMP-binding protein [Bacillus subtilis BEST7613]
gi|407964817|dbj|BAM58056.1| AMP-binding protein [Bacillus subtilis BEST7003]
gi|452116328|gb|EME06723.1| AMP-binding enzyme family protein [Bacillus subtilis MB73/2]
Length = 549
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTVLHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L QHP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYQHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|409391789|ref|ZP_11243447.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
gi|403198390|dbj|GAB86681.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
Length = 503
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 151/314 (48%), Gaps = 39/314 (12%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
+++P F++++ +E V + TS + VP ++ + ++ ++ +++ + GG +P
Sbjct: 211 IYLPNFDARAWVELVRREGATSAMVVPTMLDRIVDVLAGERA--DVPTLRSLSYGGARMP 268
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
++ A +FP+A ++AYG+TETSS++ + P A + P V Q
Sbjct: 269 RPTLEAALRAFPEAGFVNAYGLTETSSTIALLG--------PEDHRAALDSDDP--VVQA 318
Query: 131 QGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+ +G+P P +E+++ S S G + RG V +++ SV E W
Sbjct: 319 RLGSIGRPVPGIEIQLRSPEGLPVASGEQGELWVRGPQVS----GEYMGAGSVLDAEGWF 374
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
T D+ D G +++VGR + I GGEN+ P E+E VL+ HP + +VVVGI +
Sbjct: 375 PTKDLAYTDTEGFLYIVGRNDDTIIRGGENIAPAEIEDVLVHHPMVRSVVVVGIPDDHWG 434
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E + A V + + E LR + RE+ L G + P V++
Sbjct: 435 EAIAAAVVVEPGMS----------------VDPEELRTYVRER-LRGSRTPDR-VIFLDD 476
Query: 306 FPLTSTGKIRRDEV 319
P T+TGKI R +V
Sbjct: 477 LPATATGKILRKDV 490
>gi|239820433|ref|YP_002947618.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805286|gb|ACS22352.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 500
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 43/328 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKI 62
L+VG V + +F + ++A+E+H + ++ VP++ L +L+ GR S+ +I
Sbjct: 210 LIVGGGCVTMAQFRPAAVIDAIEEHRIGDIVVVPSM---LQSLLDDAAFTPGRVRSLTRI 266
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
G +P +L+ A ++P A+ AYG+TET+ ++ + E +A G +
Sbjct: 267 AFGAAPMPPDLLDRALEAWPHAEFFQAYGLTETAGAVCINLPSNHRAEA-----RALGRL 321
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPS 177
VG+ E+ + + VG +L RG VM YW A +
Sbjct: 322 N----------SVGRAGLGAEIIIADESGRELPRGEVGEVLARGPMVMQGYWRNPEAT-A 370
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + WL TGD G + G++++V R I SGGENVY EVEA L HP + V+
Sbjct: 371 AALRDGWLRTGDAGRMLPDGHLFIVDRLKDMIISGGENVYCAEVEAALRSHPQVRQAAVI 430
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ +AR E V A V L + + LR CRE+ L G+K PR
Sbjct: 431 GVPDARWGEAVHAAVVLADDARADADE----------------LRAWCRER-LAGYKCPR 473
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMS 325
R+ PL++ GK+ ++ +R + +
Sbjct: 474 GISFLRE-LPLSAAGKVLKNVLRERLQA 500
>gi|397732318|ref|ZP_10499053.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396931892|gb|EJI99066.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 542
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 47/329 (14%)
Query: 10 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
+V +P F++ LE +E + T + VP ++ +A L + S++ +L+G +
Sbjct: 248 YVVLPAFDAAQTLEMIETYNGTHSLMVPTML--IALLEHPDLATRDISSLRTVLSGAATV 305
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
P L+ + + +G TE ++ + D ++
Sbjct: 306 PESLIHRVIDRL-DCRFTILFGQTEMHGVISQTRVTDDPVD------------------- 345
Query: 130 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
Q VG+P P +E+K+ + G I RG ML Y++ A + E
Sbjct: 346 -QATTVGQPLPELEVKIADPLTGEALPIGEQGEICCRGYQNMLGYYEMPDATAATIDAEG 404
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL GD+G+ID G + + GR I GG N+YP E+E +L QHP I ++VVG+ + R
Sbjct: 405 WLHMGDLGTIDTRGFIKVTGRLTEVIIRGGVNLYPREIEELLFQHPSIADVIVVGVPDER 464
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A +RL + D S+ L+ CRE+ ++ KAP L+
Sbjct: 465 WGEQVGAVIRLHD----GHDRPDPSA-----------LKSWCRER-ISAHKAPSLWYFTD 508
Query: 304 KPFPLTSTGKIRRDEVRREVMS-HLKSLP 331
+ FP+T +GKI++ +R +++ L S P
Sbjct: 509 Q-FPMTPSGKIQKFRLRDRIIAGELASAP 536
>gi|163942257|ref|YP_001647141.1| long-chain-fatty-acid--CoA ligase [Bacillus weihenstephanensis
KBAB4]
gi|163864454|gb|ABY45513.1| AMP-dependent synthetase and ligase [Bacillus weihenstephanensis
KBAB4]
Length = 561
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 150/326 (46%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P S +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------SGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|300692553|ref|YP_003753548.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|299079613|emb|CBJ52291.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|344168821|emb|CCA81133.1| long-chain-fatty-acid-CoA ligase [blood disease bacterium R229]
Length = 571
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 157/338 (46%), Gaps = 55/338 (16%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC VF + F+ + L V + T+L VP + + ++ GR V
Sbjct: 272 LACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDV 326
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P E+MK ++ AYGMTETS P
Sbjct: 327 SSLRGGIMAGSPCPIEVMKRVVAEMSLREITIAYGMTETS-------------------P 367
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 170
+F + + + + + VG+ PH+++K+ DG+ V G + T+G VML YWD
Sbjct: 368 VSFQSAVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWD 425
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP
Sbjct: 426 D-EAKTAESIRDGWMRTGDLATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPK 484
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + V G+ + + E V A + L+ Q +E E +R+ C+++ +
Sbjct: 485 VQAVNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIREFCKDQ-I 527
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 528 AHYKIPR-YIRFVTEMPMTVTGKVQKFVMRERMIEALK 564
>gi|344344713|ref|ZP_08775573.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
gi|343803647|gb|EGV21553.1| Long-chain-fatty-acid--CoA ligase [Marichromatium purpuratum 984]
Length = 562
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA L+ G+ V+ P F+ + LEAV T+L VPA+ + R + GR +
Sbjct: 264 MACLLHGSAMVYPGPGFDPLATLEAVAAESCTALYGVPAMFKAMLEHPRAETFDPGR--L 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E M + A++ AYGMTE SS ++FM+ D +E Q
Sbjct: 322 RTGIMAGAPCPPETMDQVRRRLGMAEVTIAYGMTE-SSPVSFMSAPDDPVERRLQ----- 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLA 174
VG+ PH+E KV D G + RG +M YWD
Sbjct: 376 --------------TVGRIGPHLEAKVIDDAGRIRPVGEPGELCVRGYSLMRGYWDDPEL 421
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V WL TGD+ +D G +VG I GGEN++PEEVE L HP +
Sbjct: 422 TARVIDEAGWLHTGDLAVLDAEGYCRIVGGVKDTIIRGGENIHPEEVERFLETHPAVRAA 481
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVVG+ +ARL E+V ACV L+ L+ E LR++C+++ + FK
Sbjct: 482 VVVGVPDARLGEVVCACVELQPGAS----------------LAPEALREYCKDQ-IAYFK 524
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR L+ P STG+ + +R + ++ L
Sbjct: 525 VPRYVRLY--PQLPRSTGRALKTMLREQSIAAL 555
>gi|351713573|gb|EHB16492.1| Acyl-CoA synthetase family member 2, mitochondrial [Heterocephalus
glaber]
Length = 578
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 149/321 (46%), Gaps = 46/321 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F K ALEA+ + + L P + D+ L + + S++ + G P EL
Sbjct: 297 PSFSGKKALEAISREKGSILYGTPTMFVDI--LNQPDFSSYDLSSIRGGVIAGSPAPPEL 354
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
++ N +L AYG TE +S +TFM + +LE +
Sbjct: 355 IRAIVNKMNMKELAVAYGTTE-NSPVTFMNFPEDSLEQKAE------------------- 394
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH E ++ S + + G + RG +M YW + V + W T
Sbjct: 395 SVGRVMPHTEAQIVSMETGELAALNTPGELCIRGYCIMQGYWGEPDKTSEVVGQDKWYRT 454
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GDI ++D+ G +VGR I GGEN+YP E+E +HP + + VVG+ + R+ E
Sbjct: 455 GDIATMDEEGFCRIVGRSKDMIIRGGENIYPAELEDFFHKHPQVQEVQVVGVKDQRMGEE 514
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ AC+RL+ +E E ++ C+ K ++ FK PR ++++ +P
Sbjct: 515 ICACIRLKSGETTTE----------------EEIKAFCKGK-ISHFKIPR-YIVFVTDYP 556
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
LT +GK+++ ++R + HLK
Sbjct: 557 LTISGKVQKFKLRERMEEHLK 577
>gi|104782428|ref|YP_608926.1| AMP-binding domain-containing protein [Pseudomonas entomophila L48]
gi|95111415|emb|CAK16135.1| putative long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila
L48]
Length = 557
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 139/306 (45%), Gaps = 45/306 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+++ L AV + + L VP + +A L + +++ + G P E+M+
Sbjct: 278 FDAELTLRAVAEERASILYGVPTMF--IALLDHPSRAALDLSTLRSGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + A++ AYGMTETS ++ T D LE VT V
Sbjct: 336 KVIDQLHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT----------TV 375
Query: 136 GKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ DG +G + TRG VML YWD A W+ TGD+
Sbjct: 376 GRTHPQLETKLVDVDGRIVARGEIGELCTRGYSVMLGYWDNLQATHDALDPAGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V +VGR I GGEN+YP E+E HP + VVGI ++ E VVA
Sbjct: 436 AVMDDDGYVRIVGRNKDMIIRGGENIYPRELEEFFHTHPAVAEAQVVGIPCSKYGEEVVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+RL ++E L+Q C+ + L FK PR F + FP+T
Sbjct: 496 WIRLHPGHS----------------ATAEELQQWCKAR-LAHFKTPRHF-RFVDEFPMTV 537
Query: 311 TGKIRR 316
TGK+++
Sbjct: 538 TGKVQK 543
>gi|440778325|ref|ZP_20957089.1| FadD13 [Mycobacterium avium subsp. paratuberculosis S5]
gi|436721301|gb|ELP45444.1| FadD13 [Mycobacterium avium subsp. paratuberculosis S5]
Length = 507
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 49/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 219 LAAARLGGASVILPALDLDALLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTDVSR 274
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 275 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 316
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
V P+ VG P V+L + D VG ++TRGA+V YW++ A
Sbjct: 317 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGANVTAGYWNRPQATA 373
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 374 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 432
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 433 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 473
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ + P P + GK+ + +R +V
Sbjct: 474 QYVTVVDGPLPRNAGGKLLKARLRDQV 500
>gi|381167211|ref|ZP_09876419.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
gi|380683519|emb|CCG41231.1| Acyl-CoA synthetase family member 2, mitochondrial [Phaeospirillum
molischianum DSM 120]
Length = 564
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 50/330 (15%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP F+++ L+ V+Q TSL VP + +A L S++ +
Sbjct: 270 GACMV-IPGEGFDAERVLQTVQQERCTSLYGVPTMF--VALLNHPDFNRYDVSSLRTGIM 326
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+M++ + ++ AYGMTETS P +F
Sbjct: 327 AGSPCPIEVMRQVMDRLHMPQITIAYGMTETS-------------------PVSFQCAVD 367
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSV 178
+SV + + VG+ PHVE KV V G +L RG VM YW ++ L + ++
Sbjct: 368 DSVDR-RVSTVGRIHPHVEAKVVDPQGRIVPRGVSGELLARGYSVMRGYWGEEDLTRQAI 426
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+G W+ TGD+ ID G +VGR + GGEN+YP EVE L +HP I I V G
Sbjct: 427 DSGR-WMHTGDLAVIDAEGYCNIVGRIKDMVIRGGENIYPREVEEFLYRHPKIRDIQVFG 485
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
I + + E + A V L++ +E++ L+S V + +K P++
Sbjct: 486 IPDRQYGEQLCAWVVLKDDEDMTEAD----------LISFCV-------GEIAHYKIPKV 528
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+ + + FP+T+TGKI++ +R+ ++ L+
Sbjct: 529 -IRFVEAFPMTATGKIQKFVMRKMMIEELQ 557
>gi|403727062|ref|ZP_10947447.1| putative acid--CoA ligase, partial [Gordonia rhizosphera NBRC
16068]
gi|403204118|dbj|GAB91778.1| putative acid--CoA ligase, partial [Gordonia rhizosphera NBRC
16068]
Length = 391
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 162/340 (47%), Gaps = 49/340 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
++ L G + + +F + L V VT+ + VP ++A R+ ++ +D +
Sbjct: 89 ISNLYAGRRTMVLEQFTPEQWLSTVRDEAVTNALVVPTMLA------RIVESEADKDIPT 142
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + GG +PS +++ A +P+ ++AYG+TETSS++ + P +A
Sbjct: 143 LRNLAYGGAPMPSRVIERALELWPQVGFVNAYGLTETSSTIAVLG--------PDDHREA 194
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 173
V+ ++ + + VG+P P V +++ ++ G VGRI G V Y
Sbjct: 195 M--VSDDASIRARLGSVGRPLPGVVIQIRAEDGELLGPLEVGRICVAGEQVSAEY----A 248
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V+ + + DT D G +D G +++ GR + I G EN+ P E+E V+L+HP ++
Sbjct: 249 GIGRVTDEQGFFDTRDKGYLDADGFLFVGGRADDTIIRGAENIAPAEIEDVILRHPDVLD 308
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + + + A V LR + + S VLR H R K L
Sbjct: 309 VAVVGVPDDEWGQRIEAAVVLRPGAE----------------VDSHVLRDHVR-KTLRSS 351
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
K P FV W + P T TGK+ VRR V+ L ++P +
Sbjct: 352 KTPDRFVYWNE-VPRTETGKL----VRRHVVDRLVNVPES 386
>gi|427783845|gb|JAA57374.1| Putative acyl-coa synthetase family member 2 [Rhipicephalus
pulchellus]
Length = 594
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 149/314 (47%), Gaps = 51/314 (16%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 73
+++K L+++ + + + P ++AD+ +K D S+ +++ GG + E+
Sbjct: 316 YDTKEILKSIHNYRCSQVAGAPTMIADMIN----HPDFKSFDLSSLNRVVMGGNVVTPEM 371
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
K A F KA + YG TET+++ T +T DP Q
Sbjct: 372 RKLAKEKF-KAHVWVGYGATETTTASTLVTERDP--------------------ESKQAT 410
Query: 134 CVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+P +VE+KV + + G + RG +V + Y++ V W T
Sbjct: 411 TVGRPVGYVEVKVADPATGKETAINEPGEVWVRGHNVFIGYYNDEEKTKEVKGPAGWYKT 470
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+G +D+ G + ++GR + GGEN+YP E+E VL HP I V+G+ ++R+ E
Sbjct: 471 GDLGKMDEDGYLSIIGRLKDMVIRGGENIYPLEIEEVLETHPAIQECHVIGVPDSRMGEE 530
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A V L + ++S L+Q+C+ K L+ FK P+ F L+ +P
Sbjct: 531 LCAWVLLNPGSKVTDSE----------------LQQYCKGK-LSHFKIPKYF-LYETDYP 572
Query: 308 LTSTGKIRRDEVRR 321
T+ GK +++++R
Sbjct: 573 KTAIGKAQKNKMRE 586
>gi|339321983|ref|YP_004680877.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
gi|338168591|gb|AEI79645.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
Length = 527
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 43/322 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +F+ ++ L+ +E+ ++ L VPA M + R ++ R +K +L
Sbjct: 232 LLSGAKGVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPRARQVDYSR--LKYLL 289
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 290 YGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHTTE------------- 335
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P+ GKP P VE+KV VG ++ R H M YW Q
Sbjct: 336 ----EVPRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQHNMAGYWKQPEETART 391
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
E WL TGD G +D G +++ R I SGGENVYP EVE+ + HP + + V+G
Sbjct: 392 IDAEGWLRTGDAGYMDADGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPQVADVAVIG 451
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V L+ ++ ++ + L GFK P+
Sbjct: 452 VPDEKWGEAVKAIVVLKPGQAPDQAGIIAWTRQR-----------------LAGFKVPK- 493
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+ + + P +GK+ R ++R
Sbjct: 494 SIEFVEALPRNPSGKLLRRKLR 515
>gi|321311472|ref|YP_004203759.1| AMP-binding domain-containing protein [Bacillus subtilis BSn5]
gi|320017746|gb|ADV92732.1| AMP-binding domain protein [Bacillus subtilis BSn5]
Length = 549
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGVQGELCTRGYHVMKGYYKDKEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|47568327|ref|ZP_00239029.1| fadD13 [Bacillus cereus G9241]
gi|47555020|gb|EAL13369.1| fadD13 [Bacillus cereus G9241]
Length = 496
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCEKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP + + + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IIFLKELPKNATGKIQKVQLANQLKS 495
>gi|344174659|emb|CCA86464.1| putative o-succinylbenzoate--CoA ligase [Ralstonia syzygii R24]
Length = 497
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 144/327 (44%), Gaps = 46/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A+L+VG +F+ AL A+ +T P +++ + L K G S++
Sbjct: 210 VAVLLVGGMLCIQREFDPAQALLAIGAERLTGAWLAPVMLSRI--LASAKSQEFGISSLR 267
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ GG P + + +FP A+ I AYG+TET S T M PG+ Q G
Sbjct: 268 WVIGGGERTPEARILDFAEAFPVARYIDAYGLTETCSGDTMME--------PGRERQKIG 319
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV----GRILTRGAHVMLRYWDQFLAK 175
+ G+P P+V +++ S DG + + G I RG V YW +
Sbjct: 320 ST-------------GRPVPYVAIEIRSEDGRTLLPGEHGEICIRGPKVTPGYWKEPERT 366
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV W TGD+G +D+ G ++L R I SGGEN+ EVE VL P I V
Sbjct: 367 ASVFYPNGWFRTGDVGYLDEDGFLYLTDRLKDMIISGGENIASSEVERVLYLLPQISEAV 426
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
+G+ + R E V A V LR SE + HCR L GFK
Sbjct: 427 AIGLPDERWGEQVAAVVVLRPGATLSEQE----------------MMSHCRSL-LAGFKV 469
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR ++ P T +GK+ + +R +
Sbjct: 470 PRRLII-TDTLPRTPSGKVLKRVLREQ 495
>gi|336326225|ref|YP_004606191.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
gi|336102207|gb|AEI10027.1| acyl-CoA synthetase [Corynebacterium resistens DSM 45100]
Length = 549
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 144/321 (44%), Gaps = 44/321 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSVKKILNGGGGLPSE 72
P F ++ LEAV TSL VP + + K +++ + G P++
Sbjct: 261 PVFSPRATLEAVHHGEATSLYGVPTMFIAELQELEELGEGKLDLSTLRTGIMAGTSCPTK 320
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
M+ + ++ YGMTETS ++ TL D L+ +
Sbjct: 321 TMRAVIDILGMEEVGICYGMTETSP-VSIQTLPDDPLDKRVE------------------ 361
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+P PH+E+K+ + + + G I RG VM YWD + E W+
Sbjct: 362 -TVGRPGPHIEVKIINPDTGEILPRGEQGEICVRGYSVMKGYWDMPVKTAEAIDKEGWMH 420
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+G +DDG V + GR + GGEN+YP E+E L HP I ++G+ + + E
Sbjct: 421 TGDLGLMDDGDYVQITGRIKDMVIRGGENLYPREIEEFLYSHPDISDAQIIGVPDEKYGE 480
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A + + + L+ E LR+ C E +L K PR +V + +
Sbjct: 481 ELMAWIIMNPGAK---------------PLTVEALREFC-EGHLARHKVPR-YVHLVEEY 523
Query: 307 PLTSTGKIRRDEVRREVMSHL 327
P+T +GK+R+ E+R + + L
Sbjct: 524 PMTLSGKVRKVEMREKAIEIL 544
>gi|421075462|ref|ZP_15536475.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
gi|392526460|gb|EIW49573.1| AMP-dependent synthetase and ligase [Pelosinus fermentans JBW45]
Length = 546
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA ++ GA V I F LE +E+ T++ VP + + L ++K S++
Sbjct: 251 MACVVSGATMVPIVVFNPIKVLETIEKESCTAVHGVPTMF--IMELEEMEKNKYDTSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ + ++ YG TE S +T MT D LE
Sbjct: 309 TGIMAGSPCPIEVMKKVVDKMGVKEITITYGQTEASPGIT-MTRTDDPLEL--------- 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ P+VE+K+ S+ V G + +RG + M Y+ A
Sbjct: 359 ----------RVTTVGRALPNVEVKIIDSETGKEVPRNTQGELCSRGYNTMKGYYKMIEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+ +D+ G + GR I GGEN+YP E+E + HP + +
Sbjct: 409 TAAAIDNDGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHPKVKDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E V+A ++++ +E E L+++CREK + +K
Sbjct: 469 QVVGVPSEKYGEEVMAFIQIKPGNSITE----------------EELKEYCREK-IARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
P+ ++ + +P+T++GKI++ ++R M L
Sbjct: 512 IPK-YIAFVDGYPITASGKIQKYKLRELAMELL 543
>gi|423692301|ref|ZP_17666821.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
gi|387999829|gb|EIK61158.1| long-chain-fatty-acid--CoA ligase [Pseudomonas fluorescens SS101]
Length = 543
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 144/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L AV + T L VP + +A L ++ S++ + G P E+M+
Sbjct: 264 FDPLLTLSAVAEEKATGLYGVPTMF--IALLDHPRRAEFEVSSLRTGIMAGATCPIEVMR 321
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ A++ AYGMTETS ++ T D +E VT V
Sbjct: 322 RVIHELHMAEVQIAYGMTETSP-VSLQTGADDDIER---------RVT----------TV 361
Query: 136 GKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V R + TRG VML YW+ W+ TGD+
Sbjct: 362 GRTQPQLETKIVDEAGNTVARGVIGELCTRGYSVMLGYWNNPEGTREAIDDAGWMHTGDL 421
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G V + GR I GGENVYP E+E HP + + +VGI + R E +VA
Sbjct: 422 ATMDEEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQIVGIPDERYGEEIVA 481
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + Q + ELL C+++ + FK PR F + + FP+T
Sbjct: 482 ---------WIKFHPGQVANELELL-------SWCKDR-IAHFKTPRYFKIVDE-FPMTV 523
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L++
Sbjct: 524 TGKIQKFRMREISIQELQA 542
>gi|384175592|ref|YP_005556977.1| YngI [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349594816|gb|AEP91003.1| YngI [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 549
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERIGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|229196171|ref|ZP_04322921.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|423576312|ref|ZP_17552431.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
gi|228587329|gb|EEK45397.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|401207308|gb|EJR14087.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
Length = 496
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALMNCEKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E ++ + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 AIQDG--WLYTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ V + P +TGKI++ ++ ++ S
Sbjct: 468 KEIVFLEE-LPKNATGKIQKAQLANQLKS 495
>gi|398894512|ref|ZP_10646722.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398182332|gb|EJM69852.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 564
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 146/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLNTVAEEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R ++ LK+
Sbjct: 544 TGKIQKFRMREISVAELKA 562
>gi|410722625|ref|ZP_11361894.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanobacterium sp. Maddingley MBC34]
gi|410595956|gb|EKQ50644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanobacterium sp. Maddingley MBC34]
Length = 553
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 46/335 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA GA V + F+ L AV++ T+L VP + +A S++
Sbjct: 250 MATFSHGATMVMVELFDPLMVLAAVQKERCTALYGVPTMF--IAEYSHPMFDMFDLSSLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E MK N ++ S YG+TE S T ++ DP
Sbjct: 308 TGIMAGSTPPIEAMKRVVNDMNMTQITSVYGLTEGSPGFTQTSVDDPL------------ 355
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLA 174
+ + VGKP P E+K+ G G I +G +VM Y+
Sbjct: 356 --------EKRVETVGKPLPECEVKIVDPETGETLGPHQTGEICCKGYNVMKGYYKMPEK 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V E WL +GD+ S+D+ G +VGR I GGEN+YP E+E L PG++ +
Sbjct: 408 TREVIDDEGWLHSGDLASVDEEGYYSIVGRIKDMIIRGGENIYPREIEEFLYTMPGVLDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + + E+V AC+ L E + +E + +R + R K + FK
Sbjct: 468 QVVGIPDEKYGEIVGACIILEEEAELTEED----------------VRDYARTK-IARFK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
P+ V + FPLT++GKI++ +R + LK
Sbjct: 511 VPK-HVFFVDEFPLTASGKIQKFILREQAEKLLKE 544
>gi|41408972|ref|NP_961808.1| FadD13 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|417749516|ref|ZP_12397911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
gi|41397331|gb|AAS05191.1| FadD13 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336458971|gb|EGO37925.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
Length = 510
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 49/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A +G V +P + + L AV V+ ++TVPAI A L+ K + G D
Sbjct: 222 LAAARLGGASVILPALDLDALLNAVVAERVSVMVTVPAIYA----LLLRHKDFAGTDVSR 277
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
V+ + GG + L++ ++FP A + + YGMTET+S +T
Sbjct: 278 VRWVGYGGAPIAPSLVRTVKDAFPHATVFNGYGMTETASLMT------------------ 319
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVC--SDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
V P+ VG P V+L + D VG ++TRGA+V YW++ A
Sbjct: 320 ---VLPDREAVEHADSVGYAVPSVDLGLIPFGDNEPGVGELVTRGANVTAGYWNRPQATA 376
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
S G WL TGD+ +DD G V ++ R I GGENV EVEAVLL PG+ V
Sbjct: 377 STFAGG-WLHTGDVVRVDDAGRVHIIDRLKDIINRGGENVSSVEVEAVLLGAPGVADACV 435
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V A + + + + D + + +HCR + L FK P
Sbjct: 436 LGVPDDVMGEKVGAVL-------FGDDDIDVPA-----------VLEHCRGR-LADFKVP 476
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
+ + P P + GK+ + +R +V
Sbjct: 477 QYVTVVDGPLPRNAGGKLLKARLRDQV 503
>gi|295697204|ref|YP_003590442.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295412806|gb|ADG07298.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 525
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 147/333 (44%), Gaps = 48/333 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +GA V + + +E V + VT L P + L R + S++K
Sbjct: 234 IYLGAWGVIVEGAAPELVMETVSRERVTQLFCPPTVWISLLRHPRFDEY--DLSSLQKCY 291
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P E++KE T P A+ +AYG TE + L + + L PG
Sbjct: 292 YGAAIMPVEVLKELTRRLPGARFWNAYGQTEVAP-LAMILRPEDQLRKPG---------- 340
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
GKP +VE K+ D V G I+ R H M+ Y++ K +
Sbjct: 341 ----------AAGKPCINVESKIVDDEGREVPPGTVGEIVHRTPHAMIGYYND-PEKTAA 389
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + W +GD+G +D+ G +V R+ IK+GGENV EVE + QHPG+ + V+G
Sbjct: 390 AFEDGWFHSGDLGVMDEDGYFTVVDRKKDMIKTGGENVASREVEEAIYQHPGVAEVAVIG 449
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A V + + L+ E L CRE+ L GFK P+
Sbjct: 450 VPHPYWIEAVTAVVVPKAGSR----------------LTEEELIAFCRER-LAGFKVPK- 491
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
FV+ + P +GKI + ++ R+V HL P
Sbjct: 492 FVVITEALPKNPSGKILKRQL-RDVYQHLGERP 523
>gi|385207668|ref|ZP_10034536.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385180006|gb|EIF29282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 576
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 155/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGANMVFPGEGFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPDFATYDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + ++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YWD A
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K S + W+ TGD+ + D G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 434 KTRESIVDGWMHTGDLATFDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A V LR Q S+E ++Q C + + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWVVLRSGEQ----------------ASAEEIQQFC-QGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + P+T TGK+++ +R ++S LK
Sbjct: 537 VPK-YIRFVDELPMTVTGKVQKFIMRERMISELK 569
>gi|428279483|ref|YP_005561218.1| acyl-CoA synthetase [Bacillus subtilis subsp. natto BEST195]
gi|291484440|dbj|BAI85515.1| acyl-CoA synthetase [Bacillus subtilis subsp. natto BEST195]
Length = 549
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERMGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|183984656|ref|YP_001852947.1| long-chain-fatty-acid--CoA ligase [Mycobacterium marinum M]
gi|183177982|gb|ACC43092.1| fatty-acid-CoA ligase FadD3_2 [Mycobacterium marinum M]
Length = 479
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 47/320 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L+ GA + + F ++ LE +E +T L P + L + + + S++
Sbjct: 207 IASLIRGATIIPVRVFVLENVLELIEHERITMLPGPPTLYHSLLS----ARGQRDLSSLR 262
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ P +++ YG+TE + +TL P +F
Sbjct: 263 AGVTGAADIPVELIRRVRTELPFQTIMTGYGLTEAGT----VTLSKPE--------DSFE 310
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ + G +EL DG IL RG +VM Y D +A
Sbjct: 311 DIATTA---------GLACDGIELATADDGE-----ILVRGYNVMKGYLDDPVATAEAID 356
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
GE WL TGD+G+ID+ G + +VGR+ GG N YP E+E L++H + + V+G+
Sbjct: 357 GEGWLHTGDLGTIDETGRLRVVGRKKDMFIVGGFNAYPAEIEGFLMEHEAVAQVAVIGVP 416
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A V QS K+ LS+E L CRE+ + GFK PR V
Sbjct: 417 DERLGQVGKAFV------------VRQSGKSA---LSAEDLLGWCRER-MAGFKVPRS-V 459
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ PL +TGK+ +D +R
Sbjct: 460 RFVDALPLNATGKVVKDLLR 479
>gi|83719308|ref|YP_443798.1| AMP-binding domain-containing protein [Burkholderia thailandensis
E264]
gi|167620972|ref|ZP_02389603.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
gi|83653133|gb|ABC37196.1| AMP-binding enzyme domain protein [Burkholderia thailandensis E264]
Length = 576
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSVGAKMVFPGEAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSSTTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E V A + LR ++ LR+ CR + + +K
Sbjct: 494 QVFGVPDPKYGEEVCAWIVLRAGETMTDDE----------------LREFCRGQ-IAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|403236357|ref|ZP_10914943.1| AMP-binding domain protein [Bacillus sp. 10403023]
Length = 551
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 50/333 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GAC V + FE K A++ +++ V+ + A+ D+ + +++++
Sbjct: 253 AACIKGACIVLMDSFEPKKAIQLIKEEKVSIMYGFDAMYLDM-----MNHPDYNQEAIQT 307
Query: 62 I----LNGGGGLPSELMKEATNSFPKAKLISAYGMTETS--SSLTFMTLYDPTLETPGQL 115
+ +G G+ L K N+F K+I++YGMTE++ +SLTF+ T+ +
Sbjct: 308 LRVCMCSGTRGI---LEKVVQNNF---KVINSYGMTESTGVTSLTFLEDSKETIISTNGF 361
Query: 116 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAK 175
P A G+ V P + V + G I +G VML Y+ +
Sbjct: 362 PLA-------------GLSVNIVDPQTKQAV---STGEYGEICVKGHSVMLGYYKKPEET 405
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
V T + WL TGD G ID+ G + L GR I+ GGENV P EV+AVL+ HP +
Sbjct: 406 KEVLTEDGWLYTGDKGYIDESGYLHLSGRIKDIIRVGGENVDPLEVDAVLISHPDVFKAY 465
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V + RLTE+ A V+L N ++ E L +C+ K + FK
Sbjct: 466 TVAAPDERLTEVCAAFVQLH---------------NHVADINEEDLIAYCKTK-IASFKV 509
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + FP+T+TGK++R +++ + L+
Sbjct: 510 PK-YLFITESFPMTTTGKVQRFALKQTALKRLE 541
>gi|91785731|ref|YP_560937.1| AMP-binding protein [Burkholderia xenovorans LB400]
gi|91689685|gb|ABE32885.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia xenovorans
LB400]
Length = 576
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ ++L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGANMVFPGEGFDPAASLAAVAEEQCTALHGVPTMF--IAELDHPDFATYDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + ++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YWD A
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K S + W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 434 KTRESIVDGWMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A V LR Q ++E ++Q C + + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWVVLRAGEQ----------------ATAEEIQQFC-QGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ ++ + P+T TGK+++ +R ++S LK
Sbjct: 537 VPK-YIRFVDELPMTVTGKVQKFIMRERMISELK 569
>gi|386011894|ref|YP_005930171.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498600|gb|ADR59966.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 557
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 145/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAQEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGAADDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV ++G++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE LR+ R + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAVSEVE----------------LREWARAR-IAHFKVPRYF-RFVDAFPMTV 537
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGK+++ +R + L +
Sbjct: 538 TGKVQKFRMREISVEELSA 556
>gi|226361776|ref|YP_002779554.1| fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226240261|dbj|BAH50609.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 506
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 152/327 (46%), Gaps = 51/327 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+++G HV IP F+ + L A+ H VT + VP ++ T+ + S++ I+
Sbjct: 221 MLLGGTHVMIPAFDPVTTLTAIADHGVTDALLVPTMIQ--MTVDHPRLAEFDLSSLRHIM 278
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G + L+ A +FP AK + YGMTE + + L+D P + A
Sbjct: 279 YGASPISESLLDRARTAFPSAKFLQGYGMTELAPVASL--LHDEDHHHPIRRRSA----- 331
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 178
G+ APH +K+ DG+ H G I+ G HVML YW+ KP
Sbjct: 332 ------------GRAAPHTLIKIVDPDGNEVPRGHFGEIIVTGDHVMLGYWN----KPDE 375
Query: 179 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + W+ TGD G++D G V++ R I SGGENVY EVE VL +HP +
Sbjct: 376 TAAALRNGWMHTGDGGTMDGDGYVFVADRIKDMIISGGENVYSIEVENVLAKHPAVTQCA 435
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+ + + R E V A V L+ L+ + LR+H + + + G+K
Sbjct: 436 VIAVPDDRWGERVHAVVTLKPGTT----------------LTLDELREHSK-REIAGYKV 478
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR + FP++ GKI + E+R++
Sbjct: 479 PRSLEIV-DSFPMSGAGKILKRELRKQ 504
>gi|167582832|ref|ZP_02375706.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 576
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 153/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSVGAKMVFPGEAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSSTTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E V A + LR ++ LR+ CR + + +K
Sbjct: 494 QVFGVPDPKYGEEVCAWIVLRAGETMTDDE----------------LREFCRGQ-IAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|383451058|ref|YP_005357779.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
gi|380502680|emb|CCG53722.1| AMP-dependent synthetase and ligase [Flavobacterium indicum
GPTSA100-9]
Length = 547
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 150/325 (46%), Gaps = 53/325 (16%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP FE+ AL+AV+ TSL VPA+ + K S++ +
Sbjct: 249 GACMV-IPSESFEANQALKAVQIEKCTSLYGVPAMFIAMLQTPEFDKF--DLKSLRTGVM 305
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+MK+ + ++ YGMTETS T + P
Sbjct: 306 AGSPCPVEIMKQVQSKMYMREVSICYGMTETSPVSTQTKIGVPL---------------- 349
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
+ Q VG H+E+K+ + + + G + TRG VML+YW+ A V
Sbjct: 350 ----EKQVSTVGTIQDHLEIKIINPDTGEIVPKGTSGELCTRGYSVMLKYWNNPEATHQV 405
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ TGD+ +D+ G + + GR I GGEN+ P E+E L H I + V+G
Sbjct: 406 LDDAGWMHTGDLAQMDEEGYINITGRIKDVIIRGGENISPREIEEFLYTHEWIEDVQVIG 465
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + +L E ++A V+L+ K ++S+ L Q C+++ + +K P+
Sbjct: 466 VPDEKLGEAIMAWVKLK----------------KNAPVTSDDLLQFCQDQ-IAHYKIPK- 507
Query: 299 FVLWR--KPFPLTSTGKIRRDEVRR 321
W+ + FP+T +GK+R+ E+R
Sbjct: 508 --YWKFVESFPMTVSGKVRKVEMRE 530
>gi|262201331|ref|YP_003272539.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
gi|262084678|gb|ACY20646.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
Length = 542
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 147/325 (45%), Gaps = 49/325 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++ L AV ++ TSL VP + +A+LA L S++ + G P
Sbjct: 257 PAFDPEATLRAVAEYRCTSLYGVPTMFIAELALLD--GGASHDLSSLRTGIMAGSPCPEH 314
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M++ + ++ YGMTETS T + DP + +
Sbjct: 315 VMRQVIDRMNMGQVSICYGMTETSPVSTQTRVDDPL--------------------ELRV 354
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH+E+KV + G TRG VM YW+Q G+ W+
Sbjct: 355 TTVGRVGPHLEIKVVDPVTGETLPRGETGEFCTRGYSVMKGYWNQPEKTAEAIDGDGWMH 414
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+ + G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 415 TGDLAVMAPDGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGE 474
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A VRLR+ L++E +R+ K + K PR +V K F
Sbjct: 475 ELMAWVRLRK---------------PATDLTAEDVREFATGK-IAHHKIPR-YVHVVKEF 517
Query: 307 PLTSTGKIRRDEVRR---EVMSHLK 328
P+T TGK+R+ +R E++ HL+
Sbjct: 518 PMTVTGKVRKVAMREEAAEILEHLR 542
>gi|258654979|ref|YP_003204135.1| AMP-binding domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258558204|gb|ACV81146.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
Length = 549
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 143/318 (44%), Gaps = 51/318 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F+ + L AV TSL VP + +A+LA + G D S++ + G P
Sbjct: 258 PGFDPAATLRAVAAERCTSLYGVPTMFIAELA-----DPGFDGYDLSSLRTGIMAGSPCP 312
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+MK+ ++ YGMTETS ++ T +LE
Sbjct: 313 VEVMKQVVQRMGMTEVTICYGMTETSP-VSTQTRAGDSLER------------------- 352
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+ VG+ PHVE+KV + G + TRG VML YWD+ W
Sbjct: 353 RVSTVGRVHPHVEVKVIDPATGRTLPRGEPGELCTRGYSVMLGYWDEPDKTAQAIDAARW 412
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGD+ ++DD G + + GR + GGEN+YP E+E L HP ++ VVG+ + R
Sbjct: 413 MHTGDLAAMDDEGYLTITGRIKDMVIRGGENIYPREIEEFLHTHPDVLDAQVVGVPDQRY 472
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + A + +R L++E + + + L FK PR +VL
Sbjct: 473 GEELCAWITMRAGAP---------------ALTAEAVHEFATGR-LAHFKIPR-YVLVVP 515
Query: 305 PFPLTSTGKIRRDEVRRE 322
FP+T TGK+R+ E+R +
Sbjct: 516 EFPMTVTGKVRKVEMREK 533
>gi|260806739|ref|XP_002598241.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
gi|229283513|gb|EEN54253.1| hypothetical protein BRAFLDRAFT_164673 [Branchiostoma floridae]
Length = 551
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 143/318 (44%), Gaps = 59/318 (18%)
Query: 14 PKFESKSALEAVEQ----------HCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
P FE + L+A+++ + T++ P + D I + D S+
Sbjct: 273 PSFEPEPCLQAIQEERQLFQLFCTYFCTAIYGTPTMFID----ILHHSNFDNYDLTSLNT 328
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ G P E+MK+ + ++ AYG TE +S +TFM +LE + G
Sbjct: 329 GIMAGSPCPIEIMKQVVSKMHCPEVCIAYGTTE-NSPVTFMGYMADSLE------RKVGT 381
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKP 176
+ G+P PHVE+K+ +DG + G + TRG ML YWD
Sbjct: 382 I-------------GQPFPHVEVKIVDTDGRVTPVNTPGELCTRGPGTMLGYWDDPEKTA 428
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V + W TGDI +D+ G +VGR I GGEN+YP E+E L HP I + V
Sbjct: 429 EVIGPDRWYMTGDIAVLDEEGYGQIVGRIKDMIIRGGENIYPREIEEFLYTHPKIEDVQV 488
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + R+ E V A ++LRE E +R C+ + ++ FK P
Sbjct: 489 IGVPDERMGEEVCAWIKLREGENMEEDE----------------IRAFCKGE-ISHFKIP 531
Query: 297 RLFVLWRKPFPLTSTGKI 314
R ++ + FPLT TGK+
Sbjct: 532 R-YIRFVSEFPLTVTGKV 548
>gi|319950960|ref|ZP_08024832.1| AMP-binding domain protein [Dietzia cinnamea P4]
gi|319435382|gb|EFV90630.1| AMP-binding domain protein [Dietzia cinnamea P4]
Length = 549
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 147/328 (44%), Gaps = 46/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
G+C V P F+ ++L+AVEQ TSL VP + +A L +++ +
Sbjct: 258 GSCMVIPAPAFDPVASLKAVEQEKCTSLYGVPTMF--IAELALEDFDSYDLSTLRTGIMA 315
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P M++ + ++ YGMTETS T T D +L+
Sbjct: 316 GSPCPEATMRQVIDRMNMEEVSICYGMTETSPVST-QTRADDSLDR-------------- 360
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+K+ + G TRG VML YW+Q
Sbjct: 361 -----RVATVGRVGPHLEIKIIDPSTGETLPRGEAGEFCTRGYSVMLGYWEQPDKTAEAI 415
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGDIG +D G V + GR + GGEN+YP EVE L HP I+ V+G+
Sbjct: 416 DEAGWMHTGDIGEMDADGYVKITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGV 475
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++A VRL+ ++ L + EV R+ K L K P+ +
Sbjct: 476 PDPKYGEELMAWVRLK--------------PGRDDLTADEV-REFATGK-LARHKIPK-Y 518
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
V FP+T TGK+R+ ++R+ + L
Sbjct: 519 VHVVDEFPMTVTGKVRKVDMRKTAVEIL 546
>gi|449094516|ref|YP_007427007.1| AMP-binding domain protein [Bacillus subtilis XF-1]
gi|363747665|gb|AEW31026.1| short-chain acyl-CoA synthetase [Bacillus subtilis subsp. subtilis]
gi|449028431|gb|AGE63670.1| AMP-binding domain protein [Bacillus subtilis XF-1]
Length = 549
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + + +F+ + L+ VE+ T+L VP + +A L +++
Sbjct: 251 LACVSVGAAMIPVQEFDPVTVLKTVEKEKCTALHGVPTMF--IAELHHPDFDAYDLSTLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PSE+MK + AYG TE S +T
Sbjct: 309 TGIMAGSPCPSEVMKAVIERVGMKDITIAYGQTEASPVIT-------------------- 348
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
N + G+ PH E+K+ G+ G + TRG HVM Y+ A
Sbjct: 349 QTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGAQGELCTRGYHVMKGYYKDKEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D+ G + GR + GGEN+YP E+E L +HP ++ +
Sbjct: 409 TRKAINHDGWLFTGDLAVMDEDGYCRITGRLKDMLIRGGENIYPREIEEFLYRHPAVLDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ +A+ E A ++L++ +S + L+ +C+ K + K
Sbjct: 469 QVVGVPDAKFGEEAAAWIKLKDGKS----------------VSPDELKAYCKGK-IARHK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
PR +V++ +P+T++GKI++ ++R + +
Sbjct: 512 IPR-YVIFTDDYPMTASGKIQKYKLREKTI 540
>gi|373487663|ref|ZP_09578330.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
gi|372008738|gb|EHP09363.1| AMP-dependent synthetase and ligase [Holophaga foetida DSM 6591]
Length = 546
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 150/338 (44%), Gaps = 55/338 (16%)
Query: 1 MAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
MA+ GAC + +P F+ L+ V++ T+L VP + +A S
Sbjct: 242 MAVTTHGAC-IVVPGEAFDPGVVLKVVQEEKCTALYGVPTMF--IAEFDHPDFKTTDFSS 298
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E MK ++ YGMTETS + DP L +
Sbjct: 299 LRTGIMAGSPCPVEAMKRVQQDMNMTEVTICYGMTETSPVSAQSRVDDP-------LDKR 351
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQ 171
V S+H PHVE+K+ + + G I TRG VML YW D
Sbjct: 352 VSTV--GSIH-----------PHVEVKIIDPSNGRILPRGETGEICTRGYSVMLGYWEDT 398
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
S+ G W+ TGD+G +DD G + +VGR + GGEN+YP EVE L P +
Sbjct: 399 HSTHQSIDAGR-WMHTGDLGIMDDDGYLKIVGRIKDMVLRGGENIYPREVEEFLYTKPEV 457
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ V+G+ + + E V+A ++LR Q +E LR C+ K T
Sbjct: 458 ADVQVIGVPDIKYGEEVMAWIKLRPGAQVTEDE----------------LRTFCKGKIAT 501
Query: 292 GFKAPRLFVLWR--KPFPLTSTGKIRRDEVRREVMSHL 327
+K PR W+ FP+T +GKI++ ++R ++ L
Sbjct: 502 -YKIPR---YWKFVDEFPMTVSGKIQKFKMREAAIAEL 535
>gi|339501874|ref|YP_004689294.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338755867|gb|AEI92331.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
Length = 565
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++++ LEAV Q T+L VP + + L S++ + G P E+M+
Sbjct: 286 FDARATLEAVTQEKCTALYGVPTMFVNALELADFDTF--DLSSLRTGIMAGAPCPIEVMR 343
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + AYGMTETS ++F + D LE + V
Sbjct: 344 QVQARMHMQGVTIAYGMTETSP-VSFQSNMDDPLEK-------------------RVSSV 383
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PHVE+K+ D + V G +LTRG VM YW+ + + W+ TGD+
Sbjct: 384 GRIHPHVEVKIVDDTGNTVKTGEQGELLTRGYSVMQGYWEDDAQTAASIDAQGWMHTGDL 443
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D G + GR I GGEN+YP E+E L HP I+ V GI + +L E V A
Sbjct: 444 ARLDADGFCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDNKLGEAVCA 503
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+ R +E++ ++ CR + FK P +V ++ P+T
Sbjct: 504 WIVARAGSDLAETD----------------VQDFCRSA-IAHFKVPA-YVSFKDELPMTV 545
Query: 311 TGKIRRDEVRREVMSHL 327
TGK ++ +R ++ L
Sbjct: 546 TGKPQKFVMRDRMIKEL 562
>gi|73537400|ref|YP_297767.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha JMP134]
gi|72120737|gb|AAZ62923.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 526
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 43/322 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +F+ ++ L+ +E ++ L VPA M + R + R +K +L
Sbjct: 231 LLSGAKGVVAREFDPRAVLDFIEYERISKLFMVPAAMQIVLRDPRARSVDYSR--LKYLL 288
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 289 YGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTVVALPPEDHTTE------------- 334
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P+ GKP P VELKV VG ++ R AH M YW Q
Sbjct: 335 ----EVPRMRAAGKPLPGVELKVVDYEGRELAPGEVGEVVVRSAHNMSGYWKQPEETART 390
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGD G +D G +++ R I SGGENVYP EVE+ + HP + + V+G
Sbjct: 391 IDADGWLRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPIVADVAVIG 450
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V L+ + ++E +++ + L GFK P+
Sbjct: 451 VPDEKWGEAVKAIVVLKAG----------QAADRESIVA-------WTRQRLAGFKVPK- 492
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+ + P +GK+ R ++R
Sbjct: 493 SIDFVDALPRNPSGKLLRRKLR 514
>gi|407980554|ref|ZP_11161337.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
gi|407412687|gb|EKF34460.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
Length = 544
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L G + + F + L+ VE+ T L VP + +A L +++
Sbjct: 250 LACLTKGGTIIPLESFHPERVLQTVEKEKCTVLHGVPTMF--IAELDHPNFHSYDLSTLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G PS +MK +L AYG TE+S +T T D + E Q
Sbjct: 308 TGIMAGSLCPSHVMKAVIEKMGLRELTIAYGQTESSPVIT-QTRTDDSFERRVQ------ 360
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+ P +E+K+ G+S G + TRG HVM Y+ A
Sbjct: 361 -------------TVGRALPQIEVKIVLPGTSEEVPRGEQGELCTRGYHVMKGYYKNEEA 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + WL TGD+ +D G V + GR I GGENVYP+E+E VL HP I+
Sbjct: 408 TNEVIDEDGWLHTGDLAEMDQDGYVKITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDA 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVGI + E A +RL++ +S + L +C+ + + +K
Sbjct: 468 QVVGIPDETYGEEAAAFIRLKQGQT----------------VSIDKLTSYCQSQ-MARYK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P+ F + + +P+T++GKI++ ++++ + +K
Sbjct: 511 IPKYFFITDE-YPMTASGKIQKFRLKKQALDLIK 543
>gi|118151292|ref|NP_001071580.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Bos
taurus]
gi|122142559|sp|Q17QJ1.1|ACSF2_BOVIN RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|109658304|gb|AAI18332.1| Hypothetical protein LOC768237 [Bos taurus]
gi|296476507|tpg|DAA18622.1| TPA: acyl-CoA synthetase family member 2, mitochondrial precursor
[Bos taurus]
Length = 615
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 153/336 (45%), Gaps = 51/336 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
M LM G + P FE K LEA+ + L P + D+ + + D
Sbjct: 320 MVSLMHGVTLILCSPVFEGKKTLEAISRERGCFLYGTPTMFVDVLN----QPDFSSYDIS 375
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
+++ + G P EL++ N +L+ AYG TE S P
Sbjct: 376 TMRGGVIAGSPAPPELIRAIINKLNMKELVVAYGTTENS-------------------PV 416
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
F N T ++V Q + VG+ PH E ++ + + + G + RG VML YW +
Sbjct: 417 TFMNFTEDTVEQ-KAESVGRVMPHTEAQIVNTETGTLTELNTPGELCIRGYCVMLGYWGE 475
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ W TGDI +D+ G +VGR I GGEN+YP E+E HP +
Sbjct: 476 PQKTEEAIGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQV 535
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG+ + R+ E + AC+RL+E + ++E ++ C+ K ++
Sbjct: 536 QEVQVVGVKDDRMGEEICACIRLKEGEK----------------TTAEEIKAFCKGK-IS 578
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 579 HFKIPR-YIVFVTNYPLTVSGKIQKFKLREQMEQHL 613
>gi|453364097|dbj|GAC80184.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 548
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 50/323 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F+ +AL AVE++ TSL VP + +A+LA L T D +++ + G P
Sbjct: 263 PAFDPATALAAVEKYGCTSLYGVPTMFIAELALL----DTGASYDLSTLRTGIMAGSPCP 318
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
+M+ + A++ YGMTETS T T +L G V
Sbjct: 319 EAVMRRVIDEMNMAEVSICYGMTETSPVST-------QTRTDDELDLRVGTV-------- 363
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
G+ PH+E+K+ + V G TRG VM YW++ + W
Sbjct: 364 -----GRVGPHLEIKIVDPVTREVLPRGETGEFCTRGYSVMQGYWNEPEKTADAIDADGW 418
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
+ TGD+G + D G + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 419 MRTGDLGVMGDDGYARITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKY 478
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E ++A VR+R+ L ++ +R+ +++ K PR +V +
Sbjct: 479 GEELMAWVRVRDG---------------AAPLDADAVREFA-TGHISRHKIPR-YVHVVE 521
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
FP+T TGK+R+ E+R + + L
Sbjct: 522 EFPMTVTGKVRKVEMREKSIEFL 544
>gi|332882818|ref|ZP_08450429.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679320|gb|EGJ52306.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 545
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 52/315 (16%)
Query: 16 FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 74
F++ LEAVE+ TSL VP + +++L TL R S++ + G P E+M
Sbjct: 262 FDATKTLEAVERERCTSLYGVPTMFISELYTLDRHPYDLS---SLRTGVMAGALCPPEIM 318
Query: 75 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 134
K ++ YGMTETS P G +H
Sbjct: 319 KRVKEQMNMHEITICYGMTETS---------------PVSTQTRIGVPFEKQIHS----- 358
Query: 135 VGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG H+E+K+ + + + G + TRG VML+YW+ A V + W+ +G
Sbjct: 359 VGTIQDHIEIKIINPETKAIVPRGESGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSG 418
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V
Sbjct: 419 DLAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEV 478
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPF 306
+A ++ N+ + L+ E LR C+++ + +K PR W+ F
Sbjct: 479 MAWIK----------------PNEGVTLTEEELRNFCKDR-IAHYKVPR---YWKFVNEF 518
Query: 307 PLTSTGKIRRDEVRR 321
P+T +GKIR+ E+R
Sbjct: 519 PMTISGKIRKVEMRE 533
>gi|433443936|ref|ZP_20409059.1| AMP-dependent synthetase/ligase [Anoxybacillus flavithermus
TNO-09.006]
gi|432001910|gb|ELK22777.1| AMP-dependent synthetase/ligase [Anoxybacillus flavithermus
TNO-09.006]
Length = 558
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 49/325 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G + +PKF+ ++ L+ +E+ T P I L +KK S+K +
Sbjct: 271 IMEGYKMILLPKFDVETTLKTIEKQRPTLFPGAPTIYIALLNHPNLKKY--DLSSIKICI 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + K++ YG+TE S ++D G
Sbjct: 329 SGSAPLPVEV-QEQFETVTGGKVVEGYGLTEASPVTHSNFIWD-------------GKRI 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS------DGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
S +G P P E + S + +G I+ RG VM YW++ + +
Sbjct: 375 KGS--------IGVPWPDTEAMIVSLETGEKANVNEIGEIVVRGPQVMKGYWNR-PEETA 425
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ + WL TGD+G +++ G ++V R+ I + G NVYP EVE VL +HP + VV+
Sbjct: 426 ATLRDGWLYTGDLGYMNEEGYFFVVDRKKDMIIASGYNVYPREVEEVLYEHPKVQEAVVI 485
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ +A E V A + L+E Q +E DQ ++K L +K PR
Sbjct: 486 GVPDAYRGETVKAFIVLKEGEQCTEEELDQFMRSK-----------------LAAYKVPR 528
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
++ +RK P T+ GKI R + E
Sbjct: 529 IYE-FRKELPKTAVGKILRRALVEE 552
>gi|386849494|ref|YP_006267507.1| AMP-binding protein [Actinoplanes sp. SE50/110]
gi|359836998|gb|AEV85439.1| AMP-binding domain protein [Actinoplanes sp. SE50/110]
Length = 544
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 137/312 (43%), Gaps = 44/312 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L AV + TSL VP + +A L S++ + G P E
Sbjct: 257 PGFDPALTLRAVAEEKCTSLYGVPTMF--IAMLHHPDFAGYDLSSLRTGIMAGSPCPVET 314
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ + ++ YGMTETS ++ T D +L +
Sbjct: 315 MKQVIDRMGMTEVSICYGMTETSP-VSCQTRPDDSLTR-------------------RVS 354
Query: 134 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 188
VG+ PH+++KV + V G + TRG VML YW Q + W+ TG
Sbjct: 355 TVGRVGPHLQVKVVDPAGATVPIGESGELCTRGYSVMLGYWGQPEKTAEAVDADGWMHTG 414
Query: 189 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 248
D+ +D G + + GR + GGENVYP EVE LL HP ++ + V+G+ + + E V
Sbjct: 415 DLAEMDADGYLRITGRIKDMVIRGGENVYPREVEEFLLTHPDVVDVQVIGVPDEKFGEEV 474
Query: 249 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 308
+A +R+R L + +R C + L FK PR +V FP
Sbjct: 475 MAWIRMRPG---------------ATPLDAANVRAFCAGR-LAHFKIPR-YVRLVDEFPT 517
Query: 309 TSTGKIRRDEVR 320
T TGK+R+ E+R
Sbjct: 518 TVTGKVRKVEMR 529
>gi|357039422|ref|ZP_09101216.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358321|gb|EHG06089.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 559
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 46/329 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ GA + F +K+ LE VE++ T+L VP + +A L ++K ++++
Sbjct: 256 MLCVVSGAAMAPVESFNAKNVLETVERNSCTALHGVPTMF--IAELEEMEKNKYNTNALR 313
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N +++ YG TE S +T DP
Sbjct: 314 TGIMAGSPCPIEVMKSVVNKMGASEICITYGQTEASPGITMTRATDPI------------ 361
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
Q + VG+ P+VE+K+ + G + TRG HVM Y+ A
Sbjct: 362 --------QLRVSTVGRALPNVEVKIVDPETGEELLPGMQGELCTRGYHVMKGYYKMPEA 413
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ +D+ G + GR I GGEN+YP E+E L +P I +
Sbjct: 414 TAQTVDREAWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTNPKIKDV 473
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + R E VVA V+L+ E+ + K + +H K
Sbjct: 474 QVVGVPSERYGEEVVAFVQLKPGEIAEEAEIKEFCNGK--------IARH---------K 516
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREV 323
P F+L+ +P T++GKI++ ++R V
Sbjct: 517 IPA-FILFIGEYPSTASGKIQKYKLREMV 544
>gi|399053605|ref|ZP_10742404.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|433546213|ref|ZP_20502546.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
gi|398048382|gb|EJL40854.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|432182483|gb|ELK40051.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
Length = 552
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 52/334 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD-- 57
+A + GA V + F+ L VE T+L VP + +A+L T++ RD
Sbjct: 249 LACVATGATMVPVIAFDPGLVLSIVEAERCTALYGVPTMFIAELN-----HPTFEQRDLS 303
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P E+MK+ + + AYG TE+S +T
Sbjct: 304 SLRTGIMAGSLCPIEVMKKVVDKMGIRDITIAYGQTESSPVIT----------------- 346
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
P + + VG+ VE K+ + + + G + TRG VM Y++
Sbjct: 347 ---QTRPEDSIERKVSTVGRLHEGVEAKIINPATGEIVPPGVQGELCTRGYLVMKGYYNM 403
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
E WL TGD+ ++D+ G + GR I GGEN+YP EVE L HP I
Sbjct: 404 PDQTAKAIDEEGWLHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKI 463
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + +VG+ +A+ E V+AC+R+ K E L EVL +C E +
Sbjct: 464 LDVQIVGVPDAKYGEQVLACIRV---------------KPGETLTEEEVL-AYC-EGKIA 506
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
FK PR ++ + +P+T++GKI++ ++R + ++
Sbjct: 507 RFKTPR-YIQFVDEYPMTASGKIQKFKLREQALA 539
>gi|383826927|ref|ZP_09982042.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
gi|383331505|gb|EID10001.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
Length = 475
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 50/320 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L+ GA + + FE LE VE+ VT L P + L R K+ S++
Sbjct: 206 IASLIRGATMIPVAVFEVDRVLELVERERVTMLPGPPTLYHSLLA-ARGKRDLS---SLR 261
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ + P +++ YG+TE + T + +F
Sbjct: 262 AAVTGAADIPVELVRRIRSDLPFQSIMTGYGLTEAGTV------------TASRRGDSFE 309
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ + G+P +E+++ DG +L RG VM Y D +A
Sbjct: 310 DIATTA---------GRPCDGLEVRIADDGE-----VLVRGYSVMQGYLDDPVATAEAID 355
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WL TGD+G++D G + +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 356 DEGWLHTGDLGNLDAHGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVP 415
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A + + + ++ L CRE+ + GFK PR V
Sbjct: 416 DERLGQVGKAFI------------------VRNAAVEADDLLSWCRER-MAGFKVPRA-V 455
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ + P+ +TGK+ +D++R
Sbjct: 456 QFVEALPVNATGKVMKDDLR 475
>gi|153832529|ref|ZP_01985196.1| long-chain-fatty-acid--CoA ligase [Vibrio harveyi HY01]
gi|148871324|gb|EDL70196.1| long-chain-fatty-acid--CoA ligase [Vibrio harveyi HY01]
Length = 521
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 157/326 (48%), Gaps = 49/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK
Sbjct: 226 ASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKH 283
Query: 62 IL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
L +GG +P E++++ F + ++ YG++ET+ TF +
Sbjct: 284 SLRLGVSGGASMPVEVIRQFEQRF-ELPVLEGYGLSETAPVATFNHID------------ 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G+ P SV QP V K A ++K + +G + + VM Y+ +P
Sbjct: 331 --GDRLPGSVGQPLCGYVIKIA---DVKGHAQAVGELGEVCIKSPSVMKGYY----GRPE 381
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ HP + +
Sbjct: 382 ATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMV 441
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG + RL E V A V L + +++C + L CRE+ L +K
Sbjct: 442 AVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------CPDTLIAWCREQ-LADYK 484
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V RK P+T+TGKI + E+
Sbjct: 485 YPRR-VFIRKALPMTATGKILKRELH 509
>gi|91974734|ref|YP_567393.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
BisB5]
gi|91681190|gb|ABE37492.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 564
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ + L+ + T+L VP + +A L + S+
Sbjct: 264 LAAVTSGATMVYPGEGFDPLATLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + ++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPVEVMRRVNDQMNMREVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ + Q + VG+ PHVE+KV V G + TRG +ML YWD+
Sbjct: 363 QSAVDDP-EQRRVSTVGRIHPHVEVKVVDLEGRIVPRGQRGELCTRGYSIMLGYWDEAEK 421
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 422 TADVLDRTGWMHTGDLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 481
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A+ R E + A VR+R + L+++ +R C + + K
Sbjct: 482 QIFGVADNRYGEELCAWVRVRSGEK----------------LTADDIRAFC-QGQIAHNK 524
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR ++ + FP+T TGKI++ +R +V S L
Sbjct: 525 IPR-YIEFVDEFPMTVTGKIQKFVMREKVESKL 556
>gi|116694665|ref|YP_728876.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha H16]
gi|113529164|emb|CAJ95511.1| 4-Coumarate-CoA ligase [Ralstonia eutropha H16]
Length = 527
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 43/322 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L+ GA V +F+ ++ L+ +E+ ++ L VPA M + R ++ R +K +L
Sbjct: 232 LLSGAKGVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPRARQVDYSR--LKYLL 289
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 290 YGAAPIPAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHTTE------------- 335
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P+ GKP P VE+KV VG ++ R H M YW Q
Sbjct: 336 ----EVPRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQHNMAGYWKQPEETART 391
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
E WL TGD G +D G +++ R I SGGENVYP EVE+ + HP + + VVG
Sbjct: 392 IDAEGWLRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPQVADVAVVG 451
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V L+ ++ ++ + L GFK P+
Sbjct: 452 VPDEKWGEAVKAIVVLKPGQVPDQAGIIAWTRQR-----------------LAGFKVPK- 493
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+ + + P +GK+ R ++R
Sbjct: 494 SIEFVEALPRNPSGKLLRRKLR 515
>gi|374370611|ref|ZP_09628612.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373097896|gb|EHP39016.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 578
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 153/329 (46%), Gaps = 52/329 (15%)
Query: 5 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GAC +F + F+ + + AV + T+L VP + +A L S++ +
Sbjct: 283 ITGACMIFPGEAFDPVATMAAVSEERCTALHGVPTMF--IAQLDHPAFATYDFSSLRTGI 340
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G P E+MK ++ AYGMTETS P +F + T
Sbjct: 341 MAGAPCPIEVMKRVVADMHMTEITIAYGMTETS-------------------PVSFQSAT 381
Query: 124 PNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWD-QFLAKPS 177
+ + + + VG+ PH+E KV +DG G + TRG VML YWD + + S
Sbjct: 382 DDPLDK-RVATVGRVQPHLECKVVDTDGQIVPVGATGELCTRGYSVMLGYWDDETRTRES 440
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ G W+ TGD+ +ID G +VGR + GGENVYP EVE L +HP + + V
Sbjct: 441 IRDG--WMHTGDLATIDTEGYCNIVGRVKDMLIRGGENVYPREVEEFLFRHPKVQSVQVF 498
Query: 238 GIANARLTEMVVACVRLRESWQWSESN-CDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
G+ + + E + A V L++ +E CD CR++ + +K P
Sbjct: 499 GVPDPKYGEEICAWVVLKQGQGATEEEICD-----------------FCRDQ-IAHYKIP 540
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
R ++ + P+T TGK+++ V RE M+
Sbjct: 541 R-YIRFVNEMPMTITGKVQK-FVMRESMT 567
>gi|298245487|ref|ZP_06969293.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552968|gb|EFH86833.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 582
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L+AV++ T+L VP + +A L S++ + G P E+M+
Sbjct: 294 FDPLAVLQAVQEEQCTALYGVPTMF--IAELEHPDFHTFDLVSLRTGVMAGSPCPIEVMR 351
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ YGMTET+ ++ + D E + V
Sbjct: 352 NVINRMHMSQVEICYGMTETAP-VSVQSRLDSPFEK-------------------RVATV 391
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+K+ + S + G + TRG VML YWD A + W+ TGD
Sbjct: 392 GQIHPHLEIKIVNPESGQIVPQGIPGELCTRGYSVMLGYWDNPEATQAAIDQARWMHTGD 451
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D+ G + +VGR I GGEN+YP E+E L HP + + V+G+ + R E +
Sbjct: 452 LATMDEEGYINIVGRIKDMIIRGGENIYPREIEEFLYTHPQVSDVQVIGVPDERYGEEIA 511
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L+ +S E LR C K + +K PR ++ + +P+T
Sbjct: 512 AWIKLKPGAS----------------VSQEDLRAFCLGK-IAHYKIPR-YIKFVDAYPMT 553
Query: 310 STGKIRRDEVRREVMSHL 327
+GKI++ +R++ ++ L
Sbjct: 554 ISGKIQKYLMRQQAIAEL 571
>gi|407364067|ref|ZP_11110599.1| AMP-binding domain protein [Pseudomonas mandelii JR-1]
Length = 565
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLTTVAEEKATALYGVPTMF--IAMLDHPQRADFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
N +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVINEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGENVYP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|228985053|ref|ZP_04145221.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774741|gb|EEM23139.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 496
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP + + + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IIFLKELPKNATGKIQKAQLANQLKS 495
>gi|296140997|ref|YP_003648240.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296029131|gb|ADG79901.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 541
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 143/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F + AL AV TSL VP + +A L + S++ + G P E+
Sbjct: 257 PAFVPQDALAAVAAEKCTSLYGVPTMF--IAELALAEFDSYDLSSLRTGIMAGSPCPEEV 314
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + ++ YGMTETS T T D LE +
Sbjct: 315 MRKVVDRMGMTEVSICYGMTETSPVST-QTRIDDALEL-------------------RVG 354
Query: 134 CVGKPAPHVELKVCS--DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E++V DG+ VG + TRG VM YW+ E W+ T
Sbjct: 355 TVGRVGPHLEIRVIDPIDGTVMPRGEVGELCTRGYSVMKGYWNNEEKTAEAIDAEGWMHT 414
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ ++DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 415 GDLATMDDAGYVRVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEE 474
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A ++LRE D + E L+ E + K PR +V FP
Sbjct: 475 LMAWIQLRE-------GVDS--------FTVEDLKAFA-EGKIARHKIPR-YVHVVTEFP 517
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T +GKIR+ ++R E + L
Sbjct: 518 MTVSGKIRKVQMREESVELL 537
>gi|56420133|ref|YP_147451.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|375008623|ref|YP_004982256.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379975|dbj|BAD75883.1| fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|359287472|gb|AEV19156.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 544
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 46/326 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA V + +F K LE VE T+L VP + +A L S++
Sbjct: 248 LACVTVGATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLR 305
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK + AYG TE S +T DP LE +
Sbjct: 306 TGIMAGSPCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE------ 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 359 -------------TVGRALPGVEVKIVEPGTNKEVPPGVQGELCTRGYHVMKGYYNNPEA 405
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ +
Sbjct: 406 TNEAIDQDGWLHTGDLATMDENGYFRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDV 465
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + E V+A + L++ ++E +R+ CR +++ K
Sbjct: 466 QVVGVPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GHISRHK 508
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR ++ + +P+T++GKI++ ++R
Sbjct: 509 IPR-YIEFTDSYPMTASGKIQKFKLR 533
>gi|254389444|ref|ZP_05004671.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294815818|ref|ZP_06774461.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326444162|ref|ZP_08218896.1| AMP-binding domain protein [Streptomyces clavuligerus ATCC 27064]
gi|197703158|gb|EDY48970.1| acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294328417|gb|EFG10060.1| Acyl-CoA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 563
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 143/322 (44%), Gaps = 48/322 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L AV TSL VP + +A L S++ +
Sbjct: 271 GACMVIPAPSFDPAATLRAVADERCTSLYGVPTMF--IAELALPDFAAYDLGSLRTGIMA 328
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS T D G
Sbjct: 329 GSPCPVEVMKRVVTEMHMAEVSICYGMTETSPVSTQTRREDDLERRTGT----------- 377
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ-FLAKPSV 178
VG+ PHVE+KV + V G + TRG VM+ YW + + +V
Sbjct: 378 ---------VGRVLPHVEVKVIDPDTGTVLPRGRAGELCTRGYGVMIGYWGEPERSAEAV 428
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
TG W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I + VVG
Sbjct: 429 DTGR-WMHTGDLAVMRPDGYVQIVGRIKDMIIRGGENIYPREIEEFLHAHPKISDVQVVG 487
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + R E ++ACV R+ D ++++ + CR++ L FK PR
Sbjct: 488 VPDERYGEEILACVIPRDP-------ADPPTQDE--------VTAFCRDR-LAHFKIPRR 531
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+ FP+T +GK+R+ E+R
Sbjct: 532 VEIL-DAFPMTVSGKVRKVELR 552
>gi|332666556|ref|YP_004449344.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332335370|gb|AEE52471.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 514
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L A V +P+F++++ + +H VT VP + L K + G + +
Sbjct: 231 AGLYRAATSVLLPRFDAEAVFGLMAKHKVTVFAGVPTMYWGLLNYREEKFDYPGIAAQLR 290
Query: 62 I-LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I ++GG LP +++K+ F +I YGM+E S +TF
Sbjct: 291 IAVSGGASLPVQVLKDFEARF-NVPIIEGYGMSEGSPVVTFNH----------------- 332
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
P+ +P +G P VE+K+ D V G++L RG +VM Y+ + A
Sbjct: 333 ---PDRPRKPG--SIGTPVWGVEVKLIDDKGQTVPVGEKGQLLYRGHNVMKGYYRK-PAA 386
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ S + WL +GD+ D G ++V R I GG NVYP EVE V++QHP I +
Sbjct: 387 TAESLKDGWLHSGDVAIEDADGYFYIVDRTKDMIIRGGFNVYPREVEEVMIQHPAISMVA 446
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ + E + ACV L++ S + +K + + G+K
Sbjct: 447 VIGVPDDEYGEEIKACVVLKDGVSASPEEIIEWTKER-----------------IAGYKY 489
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR+ L P+++TGKI + E+R+
Sbjct: 490 PRVVELLAA-LPMSATGKILKKELRK 514
>gi|84495288|ref|ZP_00994407.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
gi|84384781|gb|EAQ00661.1| putative acyl-CoA synthetase [Janibacter sp. HTCC2649]
Length = 550
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 148/328 (45%), Gaps = 48/328 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ L A + TSL VP + L + +V+ +
Sbjct: 253 GACMVIPAPGFDPNLTLTATAEEKCTSLYGVPTMFIAEWALPNLGD--YDLSTVRTGIMA 310
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P+ELMK+ S I AYGMTETS P + +T +
Sbjct: 311 GSPCPAELMKKLIASGIDEMTI-AYGMTETS-------------------PVSTQTLTDD 350
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ G VG+ PH+E+K+ + G T+G VML YW Q K + +
Sbjct: 351 DFDRKVGT-VGQVGPHLEVKIVDPVTLETLPHGEPGEFWTKGYSVMLGYWGQD-DKTAEA 408
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD+ +DD G + + GR + GGEN+YP E+E L HP I+ V+G+
Sbjct: 409 LVDGWMRTGDLAVMDDAGFLQITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGV 468
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E + A +R+R+ Q L++E +R K L +K PR +
Sbjct: 469 PDEKYGEELAAWIRMRDGAQ---------------PLTAETVRAFATGK-LAHYKVPR-Y 511
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
V + FP+T TGK+R+ E+R ++ L
Sbjct: 512 VRIVEDFPMTVTGKVRKVEMREITVAEL 539
>gi|312136259|ref|YP_004003596.1| amp-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
gi|311223978|gb|ADP76834.1| AMP-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
Length = 552
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A+L G V + F+ L AVE+ T+L VP + ++ L S++
Sbjct: 250 LAILTHGGTLVMLEYFDPLLVLAAVEKEKCTALYGVPTMF--ISELSHPMFDMFDLSSLR 307
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P ELMK+ ++ YG+TE S +T ++ DP
Sbjct: 308 TGIMAGAPCPKELMKKVIEKMHMKEITIVYGLTEASPGITQTSVDDPI------------ 355
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLA 174
+ VGKP P +E+K+ G VG I RG +VM Y+
Sbjct: 356 --------DKRVETVGKPLPEIEVKIVDPKTGKKLGPGEVGEICCRGYNVMKGYYKMPKE 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ WL TGD+ +D G +VGR I GGEN+YP E+E L + PGI +
Sbjct: 408 TKEAIDEDGWLHTGDLAMMDKDGYYRIVGRIKEMIIRGGENIYPREIEEFLHKMPGIKDV 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VG+ + + E V A V + E + +K +N+ +K
Sbjct: 468 QIVGVPDEKYGEEVAAFVIKEDGADIREEDVIDYAK-----------------ENIARYK 510
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
AP+ +V + FPLT++GK+++ ++R+ L+ +N
Sbjct: 511 APK-YVFFVDKFPLTASGKVQKFKLRKIATEMLEKRKNN 548
>gi|296169603|ref|ZP_06851223.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895869|gb|EFG75564.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 467
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 144/317 (45%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + +P F+ ++ +E+ VT L P + L T+ K S++ +
Sbjct: 201 FLRGATMLPVPVFDVGEVVDLIERERVTMLPGPPTLYHSLLTVPDKAKL----SSLRAGV 256
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 257 TGAADIPVELVRRIHGELPFQTLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 304
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG +L RG VM Y D + +
Sbjct: 305 TTA---------GLPCDGVEVRIADDGE-----VLVRGYGVMQGYLDDPEGTAAAIDADG 350
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+G++DD G + +VGR+ GG N YP E+E L+ HP + V+G+ + R
Sbjct: 351 WLHTGDLGNLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLMHHPAVAQAAVIGVPDER 410
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
L ++ A V +++ +++E L CRE+ + GFK PR V +
Sbjct: 411 LGQVGKAFVVAKDA------------------VTAEELIAWCRER-MAGFKVPRS-VEFL 450
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D +R
Sbjct: 451 DVLPLNATGKVVKDLLR 467
>gi|374366830|ref|ZP_09624904.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101697|gb|EHP42744.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 519
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 149/326 (45%), Gaps = 40/326 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M M G H IP F + L+ +E+ VT ++ VP ++ + +KK + +++
Sbjct: 218 MPQWMEGNTHAIIPAFNPELVLDTLERDRVTHMLLVPTMIQMMVDHPAMKKP-RDLSALQ 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ G + +++ A + P + AYGMTE S T + T E Q G
Sbjct: 277 AIIYGASPISEAVLERAMAALPGVGFVQAYGMTELSPLATINPAWYHTAEGRAQ-----G 331
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAK 175
+ G+ + E+++ C VG + RG VM YW++ A+
Sbjct: 332 KLR----------AAGRASYTSEVRIVDGEGCEVPRGTVGEVAVRGPTVMQGYWNK-PAE 380
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + + W+ TGD G +D+ G +++V R I SGGENVY EVE L QHP ++
Sbjct: 381 NAAAVRDGWMHTGDGGYMDEDGFIFIVDRLKDMIVSGGENVYSAEVENALAQHPAVVASA 440
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ +A E V A V R S+ EL+ HC+ + G+K
Sbjct: 441 VIGVPSAEWGEAVHAVVVGRPG---------TSATAGELI-------DHCKTL-IAGYKC 483
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRR 321
PR V +R PL+ GKI + E+R+
Sbjct: 484 PR-SVEFRDALPLSGAGKILKIELRK 508
>gi|406575314|ref|ZP_11051021.1| AMP-dependent synthetase and ligase [Janibacter hoylei PVAS-1]
gi|404555291|gb|EKA60786.1| AMP-dependent synthetase and ligase [Janibacter hoylei PVAS-1]
Length = 499
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 58/329 (17%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + GA IP+F+ ALE + + VT VP + + V +T S++
Sbjct: 215 AAVRQGATLTLIPRFDPGKALEVIARDKVTIFEGVPTMYGAMLHHPAVSET--DTSSLRT 272
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP E ++E +F K L+ YG++ETS +F L PT PG
Sbjct: 273 CVSGGSSLPGETLREFEETF-KVSLLEGYGLSETSPVASFNMLDQPT--KPG-------- 321
Query: 122 VTPNSVHQPQGVCVGKPAPHVELK-VCSDGSS-----HVGRILTRGAHVMLRYWDQFLAK 175
+G+ P E+K + DG + VG I RG +VM YW +
Sbjct: 322 ------------TIGRAIPGCEMKLIGEDGQTVGPGEGVGEIAIRGDNVMKGYW----GR 365
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W TGDI S+D+ G +V R+ I GG N+YP E+E VL HP ++
Sbjct: 366 PEATEAAIPDGWFRTGDIASVDEDGYYTIVDRKKDLIIRGGMNIYPREIEEVLYTHPDVL 425
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VV + + L E V A V LRE + +L E ++Q+ +++ +
Sbjct: 426 ECAVVSVPHPELGEDVGAAVSLRE------------GASGDL----EEIKQYVKDR-VAA 468
Query: 293 FKAPRLFVLW-RKPFPLTSTGKIRRDEVR 320
+K PR +W P TGKI + E+
Sbjct: 469 YKYPR--TIWVLDELPKGPTGKILKREIH 495
>gi|167921063|ref|ZP_02508154.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
Length = 576
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSVGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|330815048|ref|YP_004358753.1| AMP-binding protein [Burkholderia gladioli BSR3]
gi|327367441|gb|AEA58797.1| AMP-binding domain protein [Burkholderia gladioli BSR3]
Length = 588
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 152/335 (45%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF F+ L AVE T+L VP + +A L + ++
Sbjct: 289 LASVSVGAKMVFPGAAFDPLVTLAAVEAERCTALQGVPTMF--IAELDHPEFKRFDLGTL 346
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK A++ AYGMTETS ++F + D TLE
Sbjct: 347 RTGIMAGSPCPIETMKRVVAEMHMAEVTIAYGMTETSP-VSFQSTTDDTLEK-------- 397
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ VG+ PH+E K+ + V G + TRG VM YW D+ L
Sbjct: 398 -----------RTTTVGRIQPHLEAKIVDAEGAIVPVGATGELCTRGYAVMAGYWGDEAL 446
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ ++ G W+ TGD+ + D+ G +VGR + GGEN+YP E+E L +HP I
Sbjct: 447 TRRAIVDG--WMHTGDLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 504
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V G+ + + E V A + LR E E LR CR + + +
Sbjct: 505 AQVFGVPDPKYGEEVCAWIVLRAGEAMDE----------------EELRDFCRGQ-IAHY 547
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR +V + + P+T TGK+++ +R ++ L+
Sbjct: 548 KVPR-YVRFVEALPMTVTGKVQKFVMRDAMIDELR 581
>gi|264676637|ref|YP_003276543.1| AMP-dependent synthetase/ligase [Comamonas testosteroni CNB-2]
gi|262207149|gb|ACY31247.1| AMP-dependent synthetase and ligase [Comamonas testosteroni CNB-2]
Length = 587
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LEAV+ T L VP + +A L + +++ + G P E+MK
Sbjct: 302 FDPITVLEAVQAEKCTGLHGVPTMF--IAELDHPRFAEFDLSTLRTGIMAGSPCPIEVMK 359
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ + D LE + V
Sbjct: 360 RVVRDMHLSEITIAYGMTETSP-VSCQSDADTPLEK-------------------RVATV 399
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+E+K+ + + G + TRG VM YW+ E W+ TGD
Sbjct: 400 GKVQPHLEVKIVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTGD 459
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR + GGEN+YP E+E L +HP + + VVG+ + R E +
Sbjct: 460 LATMDGEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEELC 519
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A + ++ + L E +R C+ + + +K PR ++ + + FP+T
Sbjct: 520 AWIIVKPGQE----------------LGEEEVRDFCKGQ-IAHYKVPR-YIRFVQAFPMT 561
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R E++ L
Sbjct: 562 VTGKIQKFRIRDEMIELL 579
>gi|167838422|ref|ZP_02465281.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424901542|ref|ZP_18325058.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390931917|gb|EIP89317.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 576
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLGTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSSTTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR E++ E LR+ CR + + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLR---------------TGEVMTDDE-LREFCRGQ-IAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|453070184|ref|ZP_21973436.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761830|gb|EME20129.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 53/331 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKGRDSVK 60
A + VGA V +P+F++ +ALE +E+ ++ VP + L L V K+ ++V
Sbjct: 236 AGICVGATLVLMPRFDATAALEIMEREKISVFAGVPTMYWGLLGVLDEVVKSGVDIETVA 295
Query: 61 K----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ ++GG LP E++ + F +++ YG++ETS F
Sbjct: 296 QNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFSA------------- 341
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWD 170
P S P+ +G P VE ++ D G VG + RG +VM Y++
Sbjct: 342 -------PES--DPRPGSIGVPIWGVEARLVDDSWHTIAGPDEVGELAIRGHNVMKGYFN 392
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ A V + W TGD+ +D GN ++V R I GG NVYP E+E VLL HP
Sbjct: 393 RPEATAEVMC-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEVLLTHPA 451
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + L E VVA V S + SES+ L + RE+ +
Sbjct: 452 VSLVAVVGVPDTSLGEEVVAFVIREPSEEISESD----------------LVEWTREQ-M 494
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+K PR + + P+T+TGKI + E+ +
Sbjct: 495 AAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|145223112|ref|YP_001133790.1| long-chain-fatty-acid--CoA ligase [Mycobacterium gilvum PYR-GCK]
gi|145215598|gb|ABP45002.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length = 478
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 43/319 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA +P F+ +E + +T L P + +L+ VK + +++
Sbjct: 198 IASFIRGATMFPVPVFDVDRVVELIAAERITMLPGPPTLYH---SLLAVKDKSR-LATLR 253
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ P L + YG+TE ++ TL PG +F
Sbjct: 254 AGVTGAADIPVELIRRVHEELPFQTLATGYGLTEAGTA---------TLSRPGD---SFD 301
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
++ + G VEL++ DG +L RG VM Y D A
Sbjct: 302 DIATTA---------GVACDGVELRIAEDGE-----VLIRGYTVMQGYLDDPDATAEAID 347
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G++D+ G + +VGR+ GG N YP E+E LL+HPG+ VVG+
Sbjct: 348 PDGWLHTGDLGTLDEAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPGVAQAAVVGVP 407
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R+ ++ A V + + D S+ + L + L CRE+ + GFK PR +V
Sbjct: 408 DERMGQVGKAFV-------VAAAPADGSAGS----LDAHALIAWCRER-MAGFKVPR-YV 454
Query: 301 LWRKPFPLTSTGKIRRDEV 319
+ PL +TGK+ +D +
Sbjct: 455 EFLDELPLNATGKVMKDRL 473
>gi|378549663|ref|ZP_09824879.1| hypothetical protein CCH26_06240 [Citricoccus sp. CH26A]
Length = 552
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GA V P F+ + L AV TSL VP + +A L S+
Sbjct: 246 LAATTHGAAMVIPAPGFDPAATLHAVATEKCTSLYGVPTMF--IAELGLPDFESYDLSSL 303
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P +M++ + YGMTETS P +
Sbjct: 304 RTGVMAGSPCPESVMRQVIEQMNMTDVTICYGMTETS-------------------PVSI 344
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ T +S+ + + VG+ H+ ++V + V G + T+G VM YW+
Sbjct: 345 QSSTSDSLER-RVSTVGRVGAHLRIRVVDPATGEVVPRGQAGELQTQGYAVMKGYWNDPE 403
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
E W+ TGD+G +D+ G V + GR + GGEN+YP E+E L HP II
Sbjct: 404 RTAEAIDAEGWMHTGDLGVMDEEGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIID 463
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + + E ++A +R+RE ++E LR++C + + +
Sbjct: 464 AQVVGVPDEKYGEELIAWIRIREGADAP---------------TAESLREYCSGR-IAHY 507
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + FP+T TGK+R+ ++R + M L
Sbjct: 508 KIPR-YVRVIEEFPMTVTGKVRKVDLREQAMELL 540
>gi|319652843|ref|ZP_08006949.1| long-chain fatty-acid-CoA ligase [Bacillus sp. 2_A_57_CT2]
gi|317395420|gb|EFV76152.1| long-chain fatty-acid-CoA ligase [Bacillus sp. 2_A_57_CT2]
Length = 537
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 47/321 (14%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
+ +P+F+ + L ++ + VP + + R ++ G DS++ +G +P
Sbjct: 259 ILLPRFDLEEVLNTIKNEQPSVFPGVPTMYVAITNHPRAEEY--GIDSIETCNSGSAPMP 316
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
EL+++ AK++ YG++E S +T +P P S +P
Sbjct: 317 VELLRDFEQK-TGAKILEGYGLSEASP----VTHCNP----------------PFSERKP 355
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
V +G P+ ++ + G+ V G ++ +G +M YW+ + +V+ + WL
Sbjct: 356 GSVGIGFPSTDYKVVDLATGTEEVPNGELGEVIIKGPQIMRGYWN-MPEETAVTLRDGWL 414
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGDI +DD G +++V R+ I + G N+YP ++E VL +HP + VV+G+ +A
Sbjct: 415 YTGDIARMDDDGFLYIVDRKKDLIIASGYNIYPRDIEEVLYEHPAVQEAVVIGVPDAYRG 474
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E V A + L+ +SS K+++ +C++ NL +K P V +R+
Sbjct: 475 ETVKAFIVLK---------AGKSSSEKDII-------SYCKQ-NLAAYKIPSA-VEFRQE 516
Query: 306 FPLTSTGKIRRDEVRREVMSH 326
P T+ GKI R +R EV SH
Sbjct: 517 LPKTNVGKILRRALRDEVRSH 537
>gi|417411937|gb|JAA52387.1| Putative acyl-coa synthetase family member 2 mitochondrial
precursor, partial [Desmodus rotundus]
Length = 613
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 143/321 (44%), Gaps = 46/321 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F K ALEA+ + T L P + D+ S I GG P +L
Sbjct: 332 PVFNGKQALEAISRERGTFLYGTPTMYVDILNQPDFSSYDISAMSAGAI--GGAPAPPDL 389
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
++ N L+ AYG TE +S +TFM + TLE
Sbjct: 390 IRAIVNKLNAKDLVIAYGTTE-NSPVTFMHFPEDTLEQKSH------------------- 429
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH E K+ + + G + RG VML YW+ V + W T
Sbjct: 430 SVGRVMPHTEAKIMNTETGATAELNTPGELCIRGYCVMLGYWNDPQKTEEVIGLDKWYRT 489
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD ++D+ G +VGR I GGEN+YP E+E L HP + + VVG+ + R+ E
Sbjct: 490 GDTATMDEQGLCKIVGRSRDMIIRGGENIYPVELENFLHTHPQVQEVQVVGVKDNRMGEE 549
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ AC+RL+ + + E ++ C+ K ++ FK PR ++++ +P
Sbjct: 550 ICACIRLKNGEE----------------ATPEEIKAFCKGK-ISHFKIPR-YIVFVTNYP 591
Query: 308 LTSTGKIRRDEVRREVMSHLK 328
LT TGKI++ ++R ++ HL
Sbjct: 592 LTVTGKIQKFKLREQMERHLN 612
>gi|17545161|ref|NP_518563.1| AMP-binding protein [Ralstonia solanacearum GMI1000]
gi|17427452|emb|CAD13970.1| putative fatty-acid--coa ligase transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 571
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 156/335 (46%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC VF + F+ + L AV + T+L VP + +A L + S+
Sbjct: 272 LACAATGACMVFPGEAFDPLATLRAVAEERCTALHGVPTMF--IAQLDHPEFPSFDVSSL 329
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK ++ AYGMTETS P +F
Sbjct: 330 RGGIMAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSF 370
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ + + + + VG+ PH+++K+ DG+ V G + TRG VML YWD
Sbjct: 371 QSAVTDPLDK-RVTTVGRVQPHLQVKLV-DGAGEVVPVGEKGELCTRGYSVMLGYWDD-E 427
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP +
Sbjct: 428 AKTAESIQDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQA 487
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ Q ++ E +R+ C + + +
Sbjct: 488 VNVFGVPDPKYGEEVCAWIVLKPGQQATQ----------------EEIREFC-QGQIAHY 530
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR ++ + P+T TGK+++ +R ++ L+
Sbjct: 531 KIPR-YIRFVTEMPMTVTGKVQKFVMRERMIEELR 564
>gi|75910191|ref|YP_324487.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
gi|75703916|gb|ABA23592.1| AMP-dependent synthetase and ligase [Anabaena variabilis ATCC
29413]
Length = 662
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 141/313 (45%), Gaps = 53/313 (16%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ ++ L + ++ +T VP L+ K + + DSV+ + GLP E+ K
Sbjct: 231 FDPETVLTTISEYNITIFFGVPTTF----ILLCDKASIRDLDSVRYYFSAAAGLPVEIAK 286
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ F K + YG+TETS P +L G++
Sbjct: 287 RWQDKFGKV-INQGYGLTETS----------PLASYNHELRYKLGSI------------- 322
Query: 136 GKPAPHVELKV------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G P +VE+K+ C +G I+ RG +VML YW++ A+ + + W TGD
Sbjct: 323 GSPIENVEMKIVSLDDGCEVAPGELGEIVIRGVNVMLGYWNR-PAETAKAMKNGWFHTGD 381
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
IG ID+ G ++V R I +GG VYP EVE V+ QHPGI + V G+ ++ L E V
Sbjct: 382 IGQIDELGYFYIVDRLKDMINNGGLKVYPAEVENVIYQHPGIAEVAVYGVPDSVLGEQVK 441
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A + L+ DQ+ E++ C +K L +K P V + P
Sbjct: 442 ASIVLKP---------DQAVTEAEII-------AFCYQK-LAQYKVPSA-VEFVSSIPKN 483
Query: 310 STGKIRRDEVRRE 322
TGKI + +R+E
Sbjct: 484 PTGKILKRLLRQE 496
>gi|295395646|ref|ZP_06805838.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971462|gb|EFG47345.1| possible long-chain-fatty-acid--CoA ligase [Brevibacterium
mcbrellneri ATCC 49030]
Length = 575
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 141/315 (44%), Gaps = 45/315 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F + LE V H TSL VP + L G +++ + G P E+
Sbjct: 292 PGFNPQKTLETVTAHKATSLYGVPTMFIAELELENFGDYDLG--TLRTGVMAGSTCPVEV 349
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M + + A++ YGMTETS ++ MT D ++E Q
Sbjct: 350 MNKVIDRMNMAEVAICYGMTETSP-VSTMTRADDSIERRTQ------------------- 389
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PHVE+KV + G + TRG VM YW++ W+ T
Sbjct: 390 TVGRVMPHVEVKVADPVTGLPLPRGQKGELCTRGYSVMRGYWNEPDKTAEAIDDAGWMHT 449
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ +D+ G + + GR + GGEN+YP E+E L HP I + VVG+ ++ E
Sbjct: 450 GDLAIMDEDGYLDISGRIKDMVIRGGENIYPREIEEFLYTHPAIRDVQVVGVPDSTYGEE 509
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V LR+ L++E ++ + K L +K PR +V R FP
Sbjct: 510 LLAWVILRDPTD---------------TLTAEDVKAFAQGK-LAHYKIPR-YVEVRTEFP 552
Query: 308 LTSTGKIRRDEVRRE 322
+T +GKIR+ E+R E
Sbjct: 553 MTVSGKIRKVELRAE 567
>gi|452910897|ref|ZP_21959574.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
gi|452834069|gb|EME36873.1| Long-chain-fatty-acid--CoA ligase [Kocuria palustris PEL]
Length = 497
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 144/323 (44%), Gaps = 47/323 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A + VGAC +P F+ ++ L+ + +H VT +I VP++ L ++ ++ + S+
Sbjct: 214 APVAVGACISLVPSFQPRAVLQQLGEHGVTRVIGVPSMHMALCQ-VQARQPLE-LPSLDS 271
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
L+GG LP E+++ F L YG++ETS + F D + PG
Sbjct: 272 ALSGGAALPVEVLRRFEQLF-GITLYEGYGLSETSPVVAFNQPVDQRV--PG-------- 320
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKP 176
+G P + + D +G + G +VM YW Q
Sbjct: 321 ------------SIGTPVEEARVAILDDDGRELPRGEIGELAVAGRYVMAGYWKQPELTA 368
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ GE + TGD+ D+ +W+V R+ I G NVYP E+E ++ +HPG+ V
Sbjct: 369 AAFAGE-YFRTGDMARQDEDDRLWIVDRKKDTILRNGYNVYPREIEELIYEHPGVEEAAV 427
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG A + VVAC+ LR+ Q +E E LR RE +L +K P
Sbjct: 428 VGRGGATTDQQVVACLVLRDGAQEAE--------------VIEQLRATMRE-SLASYKRP 472
Query: 297 RLFVLWRKPFPLTSTGKIRRDEV 319
+ + + P STGKI + E+
Sbjct: 473 QAYKVV-DALPKGSTGKILKREI 494
>gi|326383718|ref|ZP_08205403.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197482|gb|EGD54671.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 558
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 155/349 (44%), Gaps = 63/349 (18%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD- 57
+A + G+ V P F+ K+AL AVE++ TSL VP + +A+LA L + G +
Sbjct: 247 LAAIAFGSAMVIPGPAFDPKTALAAVEKYRCTSLYGVPTMFIAELALL----DSGAGSEA 302
Query: 58 -------------SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 104
S++ + G P ++M+ +++ YGMTETS T T
Sbjct: 303 SGPSAHGETFDLSSLRTGIMAGSPCPEQVMRRVIGEMNMSQVSICYGMTETSPVST-QTR 361
Query: 105 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRIL 158
D L+ + VG+ PH+E+K+ + G
Sbjct: 362 MDDDLDL-------------------RVATVGRVGPHLEIKIADPITGETLPRGETGEFR 402
Query: 159 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 218
TRG VM YW+ + W+ TGD+ + D G V + GR + GGEN+YP
Sbjct: 403 TRGYSVMKGYWNDPEKTADALDADGWMATGDLAVMGDDGYVRITGRIKDMVIRGGENIYP 462
Query: 219 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 278
E+E L HP I+ V+G+ + + E ++A +R+RE Q +++
Sbjct: 463 REIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWIRVREGAQ---------------PMTA 507
Query: 279 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
E +R+ N++ K PR +V FP+T TGK+R+ E+R + L
Sbjct: 508 ETIREFA-AGNISRHKIPR-YVHVVDEFPMTVTGKVRKVEMRERSIEFL 554
>gi|402699063|ref|ZP_10847042.1| AMP-binding domain protein [Pseudomonas fragi A22]
Length = 560
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV Q T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 281 FDPGLTLQAVAQERATALYGVPTMF--IAMLDHPQRAEFDLSSLRTGIMAGATCPIEVMR 338
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS +++T P + + V
Sbjct: 339 RVISEMHMGEVQIAYGMTETSPV---------SIQT-----------APADDLELRVTTV 378
Query: 136 GKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ ++G+ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 379 GRTQPQLENKLIDAEGNVVVRGAIGELCTRGYSVMLGYWNNPQATREAIDSEGWMHTGDL 438
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + VVGI +AR E +VA
Sbjct: 439 AQMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVVGIPDARYGEEIVA 498
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ +E L+ C+ + + FK PR F + FP+T
Sbjct: 499 WIKFHPGHTANELE----------------LQTWCKSR-IAHFKTPRYFK-FVDVFPMTV 540
Query: 311 TGKIRRDEVR 320
TGKI++ ++R
Sbjct: 541 TGKIQKFKMR 550
>gi|56478075|ref|YP_159664.1| AMP-binding protein [Aromatoleum aromaticum EbN1]
gi|56314118|emb|CAI08763.1| putative long chain fatty-acid CoA ligase [Aromatoleum aromaticum
EbN1]
Length = 562
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
FE + LE + + T+ VP + + R R ++ + G P E+MK
Sbjct: 278 FEPVAVLETLAEERCTAAYGVPTMFIAMLDHPRFGDFDLSR--LRTGIMAGSPCPIEVMK 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS P +F + T + V + V
Sbjct: 336 RVIDRMNMREVTIAYGMTETS-------------------PVSFQSGTGDPVERRVST-V 375
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + V G + TRG VML YW+ W+ TGD+
Sbjct: 376 GRVQPHLEVKIVDNDGRIVPRGVAGELCTRGYSVMLGYWNDVDRTRDAIDAAGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+IDD G +VGR + GGEN+YP E+E L +HP I+ + VVG+ + + E + A
Sbjct: 436 ATIDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGVPDQKYGEELCA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+ +RE LS++ +R C + + K PR ++ + FP+T
Sbjct: 496 WIIVREGEA----------------LSADEVRAFC-QGQIAHHKVPR-YIKFVDSFPMTV 537
Query: 311 TGKIRRDEVRREVMSHL 327
TGKI++ ++R ++ L
Sbjct: 538 TGKIQKFQIREQMKREL 554
>gi|323527839|ref|YP_004229992.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
gi|323384841|gb|ADX56932.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
Length = 576
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFASYDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 435 TRESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ +A+ E V A V LR Q ++E ++Q C + + +
Sbjct: 493 VQVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFC-QGQIAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 536 KVPR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|312198562|ref|YP_004018623.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311229898|gb|ADP82753.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 542
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 149/333 (44%), Gaps = 45/333 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L+VGA V P F+ + + VE +T L PA+ T++ T S +
Sbjct: 248 LASLLVGATLVPYPVFDVPAVMRLVETEKITMLPGPPAVYQ---TILNSDLTGYDLSSWR 304
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ +++ YG+TET+ ++ D
Sbjct: 305 LAVTGSAAVPVELVRRLRADLGLRTVVTGYGLTETTGTVAMCRHTD-------------- 350
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
P V + G + +E++V D + V G I+ RG ++M Y D A
Sbjct: 351 --DPELVSRTSGRALDG----IEVRVVDDAGTEVPRGEPGEIIVRGFNIMTGYLDNPAAT 404
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ WL TGDIG +DDGGN+ + R+ GG N YP E+E++L +HP I +
Sbjct: 405 AETIDADGWLKTGDIGVMDDGGNIAITDRKKDMFIVGGFNAYPAEIESMLAEHPAIAQVA 464
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ + RL E+ +A V R + +E++ R++ + +KA
Sbjct: 465 VVGVPDERLGEVGMAYVIPR--------------TGQPRPTPAEII-AWSRDR-MANYKA 508
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR +V PL +TGK+ R E+R + L+
Sbjct: 509 PR-YVEVVDALPLNATGKVVRYELRDRAAATLR 540
>gi|119718156|ref|YP_925121.1| AMP-binding domain-containing protein [Nocardioides sp. JS614]
gi|119538817|gb|ABL83434.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 539
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 140/322 (43%), Gaps = 49/322 (15%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPS 71
P F+ + L + T + VP + + T+ D S++ + G P
Sbjct: 255 PGFDPEITLRTIAAERCTGVYGVPTMFIAMQN----HPTFAEHDLSSLRTGIMAGSICPV 310
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
E+MK + A++ AYGMTETS ++ T D LE +
Sbjct: 311 EVMKRCVDDMHMAEVAIAYGMTETSP-VSCQTRADDDLER-------------------R 350
Query: 132 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+G+ P+VE+K+ S G TRG VML YWD + W+
Sbjct: 351 TATIGRVHPYVEIKIVDPVSGETVERGRTGEFCTRGYSVMLGYWDDPEKTAEAVDADGWM 410
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ + + G +VGR + GGEN+YP E+E L QHP I + V+G+ + R
Sbjct: 411 HTGDLAEMREDGYCNIVGRITDMVIRGGENIYPREIEEFLYQHPDIEDVQVIGVPDERYG 470
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E + A VR+R + L ++ +R + L+ +K PR +VL
Sbjct: 471 EELCAWVRMRAGAE---------------PLDADAVRAFATGR-LSHYKIPR-YVLVVDE 513
Query: 306 FPLTSTGKIRRDEVRREVMSHL 327
FP+T TGKIR+ ++R E L
Sbjct: 514 FPMTVTGKIRKVQMREESAKRL 535
>gi|398852244|ref|ZP_10608909.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
gi|398244606|gb|EJN30150.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM80]
Length = 565
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+ V + T L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLQTVAEEKATGLYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T PN + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPNDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWSNPQATAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S+++ G V + GR I GGENVYP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNEEGYVNIAGRNKDMIIRGGENVYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHNASELE----------------LQTWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSL 330
TGKI++ +R + +K++
Sbjct: 544 TGKIQKFRMREISIEEIKTI 563
>gi|398816032|ref|ZP_10574690.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
gi|398033379|gb|EJL26682.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
Length = 552
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 147/339 (43%), Gaps = 46/339 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F+ L VE T+L VP + +A L + S++
Sbjct: 249 LACVATGATMVPVIAFDPGVVLAVVEAERCTALYGVPTMF--IAELNHPMFADRDLSSLR 306
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ + + AYG TE S +T
Sbjct: 307 TGIMAGSLCPIEVMKKVVDQMGIRDITIAYGQTEASPVIT-------------------- 346
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLA 174
P + + VG+ VE K+ + + G + TRG VM Y++
Sbjct: 347 QTVPEDSLERKVSTVGRLHAEVEAKIIDPATGDILPPGVQGELCTRGYLVMKGYYNMPEE 406
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ ++D+ G + GR I GGEN+YP EVE L HP ++ +
Sbjct: 407 TVKAIDHEGWLHTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKVLDV 466
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VGI +A+ E V+AC+R+ K E L EV R +C E + +K
Sbjct: 467 QIVGIPDAKYGEQVLACIRV---------------KPHETLTEDEV-RDYC-EGKIAHYK 509
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
PR ++ + +P+T++GKI++ ++R + + + N
Sbjct: 510 VPR-YIQFVDEYPMTASGKIQKFKLREQALELFRQSNPN 547
>gi|186477771|ref|YP_001859241.1| AMP-binding domain-containing protein [Burkholderia phymatum
STM815]
gi|184194230|gb|ACC72195.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 576
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 154/334 (46%), Gaps = 49/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + FE + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGAAMVFPGEAFEPGATLRAVSEEKCTALHGVPTMF--IAELDHPDFATFDLTRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + A++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVSQMHLAEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGDIVPVGETGELCTRGYSVMKGYWGDEAK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 435 TQESIVDG--WMHTGDLATIDADGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V G+ +A+ E V A V LR + L++E L++ CR + +
Sbjct: 493 AQVFGVPDAKYGEEVCAWVVLRSGER----------------LTAEDLQEFCR-GQIAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P+ ++ + P+T TGK+++ +R ++ L
Sbjct: 536 KIPK-YIRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|297566016|ref|YP_003684988.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
gi|296850465|gb|ADH63480.1| AMP-dependent synthetase and ligase [Meiothermus silvanus DSM 9946]
Length = 559
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 55/333 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L +G V +P+ E + +EA+E+H VT VP + ++ + +++
Sbjct: 271 LALGYKIVLLPRPEVAACVEAIEKHGVTHFPGVPTLYTAFNHFPGIQN--RKIHTIRVCN 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+M E K++ YG+TE + P N
Sbjct: 329 SGSAPLPLEVM-ERFEQLTGGKVLEGYGLTEAA-------------------PVTHSN-- 366
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSV 178
P S + +G VG P P V+ K+ VG + RG ++M YW+ +P
Sbjct: 367 PVSGLRKKG-SVGLPFPGVDAKILGPDMQELPPGEVGELAVRGPNIMKGYWN----RPEE 421
Query: 179 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL HP I
Sbjct: 422 TAKTLVIDWLLTGDMAKMDEDGYFYIVDRKKDVIIAGGYNIYPREVEEVLYAHPAIQEAC 481
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ ++ E V A V L+ +E+ L ++CRE NL FK
Sbjct: 482 VVGVPDSYRGETVAAYVVLKPGANLTEAE----------------LEKYCRE-NLAAFKI 524
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR+ + +RK P ++ GKI R ++R E + K
Sbjct: 525 PRI-IEFRKELPKSAVGKILRRQLREEAIQAQK 556
>gi|118353005|ref|XP_001009773.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291540|gb|EAR89528.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 589
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 143/324 (44%), Gaps = 43/324 (13%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F + ++++V ++ +T++ VP + + +++K + G P LM
Sbjct: 296 FNPQHSMQSVGEYQITTMYGVPTMFYEYIKEYEHNPKLYNISTLRKGIMAGALCPQSLMS 355
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N + L AYGMTETS P +F + +++ G V
Sbjct: 356 KLINEWKMTDLQIAYGMTETS-------------------PISFQTESSDNLEDKCGT-V 395
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
GK PH E K+ + G + RG VM +YW WL TGD+
Sbjct: 396 GKIFPHTEAKIINSKGKILERGQSGELCIRGYPVMQKYWADIRNTNKTIDTNGWLKTGDV 455
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+DD G V +VGR I GGEN+YP+E+E L HP I+ + VVG+ N + E A
Sbjct: 456 AVMDDRGYVKIVGRIKEMIIRGGENIYPKEIEEFLRTHPSIMDVQVVGVPNQKFGEETFA 515
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+RL+ Q+ + K L ++ + C+ + + +K P+ +V + FPLT
Sbjct: 516 LIRLK-----------QNQEVKPLDIA-----EFCKGQ-IAHYKVPK-YVKFVDSFPLTI 557
Query: 311 TGKIRRDEVRREVMSHLKSLPSNL 334
TGK ++ ++ + + NL
Sbjct: 558 TGKPQKFKMVASIKEEMNGSEQNL 581
>gi|229105149|ref|ZP_04235800.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-28]
gi|228678330|gb|EEL32556.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-28]
Length = 582
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 291 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 348
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 349 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 401
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 402 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 447
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 448 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 507
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 508 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 550
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 551 -FRDELPKTTVGKILRRVLIDEEKRK 575
>gi|392961068|ref|ZP_10326531.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|421055058|ref|ZP_15518022.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|421061347|ref|ZP_15523690.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|421065469|ref|ZP_15527215.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
gi|421071938|ref|ZP_15533051.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392440161|gb|EIW17849.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B4]
gi|392446526|gb|EIW23811.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A11]
gi|392450033|gb|EIW27088.1| AMP-dependent synthetase and ligase [Pelosinus fermentans B3]
gi|392454319|gb|EIW31156.1| AMP-dependent synthetase and ligase [Pelosinus fermentans DSM
17108]
gi|392458841|gb|EIW35326.1| AMP-dependent synthetase and ligase [Pelosinus fermentans A12]
Length = 546
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA ++ GA V I F LE +E+ T++ VP + + L ++K S++
Sbjct: 251 MACVVSGATMVPIVAFNPIKVLEIIEKERCTAVHGVPTMF--IMELEEMEKNKYDTSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK+ + ++ YG TE S +T MT D LE
Sbjct: 309 TGIMAGSPCPIEVMKKVVDQMGVREITITYGQTEASPGIT-MTRTDDPLEL--------- 358
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ P+VE+K+ + V G + RG + M Y+ A
Sbjct: 359 ----------RVTTVGRALPNVEVKIIDPENGKEVPVNTQGELCCRGYNTMKGYYKMIEA 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + WL TGD+ +D+ G + GR I GGEN+YP E+E + HP + +
Sbjct: 409 TAAAIDNDGWLHTGDLAVMDENGYCKITGRLKDMIIRGGENIYPREIEEFIYTHPKVKDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + + E V+A ++++ +E E L+++CRE N+ +K
Sbjct: 469 QVVGVPSEKYGEEVMAFIQIKPGNSITE----------------EELKEYCRE-NIARYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
P+ ++ + + +P+T++GKI++ ++R M L
Sbjct: 512 IPK-YIAFVEDYPITASGKIQKYKLRELAMELL 543
>gi|374607766|ref|ZP_09680566.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373554328|gb|EHP80907.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 542
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 141/320 (44%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L+A+E+ T + VP + +A L + + S++ + G P E+
Sbjct: 255 PAFDPALTLDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSLRTGVMAGSVCPVEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK + ++L AYGMTETS ++ T D LE +
Sbjct: 313 MKRCVSDMNASELAIAYGMTETSP-VSCQTRIDDDLER-------------------RTS 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + V G TRG VM+ YW+ + W+ T
Sbjct: 353 SIGRAHPHVEIKIVDAETGEVVERGQTGEFCTRGYSVMIGYWEDEAKTAESIDDDGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + D G +VGR + GGEN+YP E+E L HP + V+G+ + + E
Sbjct: 413 GDLAVMRDDGYCNIVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A VR+ K + + + LR K L +K PR +V FP
Sbjct: 473 ICAWVRM---------------KPGKGPVDARALRDFATGK-LAHYKIPR-YVHVVDEFP 515
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGK+R+ E+R E + L
Sbjct: 516 MTVTGKVRKVEMRAETVKLL 535
>gi|302383139|ref|YP_003818962.1| AMP-dependent synthetase and ligase [Brevundimonas subvibrioides
ATCC 15264]
gi|302193767|gb|ADL01339.1| AMP-dependent synthetase and ligase [Brevundimonas subvibrioides
ATCC 15264]
Length = 577
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 148/340 (43%), Gaps = 44/340 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A L VG V KF+ ++ L AVE+H VT L+ +P + LA L + T S+K
Sbjct: 268 LAALFVGGAIVPHLKFDPRATLRAVERHRVTDLLLIPTMT--LAVLDALVDTPVDTTSLK 325
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LET------- 111
+L+ GG P L +F ++ + YGM+E ++S T DPT L+T
Sbjct: 326 GMLSSGGRTPPGLWDRILATFNGIEITTGYGMSECTASTTVTRPDDPTDRLQTTNGRLRD 385
Query: 112 --PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW 169
P P + V PQ V P VG ++ RG V Y+
Sbjct: 386 VGPAGDPAIGHRIVDYRVVDPQSGAVLPPG-------------EVGELMARGPGVTAGYY 432
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
D+ A E WL TGD+G ID G + LVGR + GGE V P E+E VL+ HP
Sbjct: 433 DKPEATAEAFDAEGWLHTGDLGRIDADGYLSLVGRVKESYRCGGEQVTPSEIEDVLMVHP 492
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
++ V + + R+ E+ VA V +R L + L C +
Sbjct: 493 SVLQAHVAPVPDDRMGEVGVAFVVVRAGQA----------------LDPQALIDWCAGR- 535
Query: 290 LTGFKAPR-LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
L FK PR + + + PLT +G+ R+ + R + L
Sbjct: 536 LARFKVPRHILPIGAEDVPLTPSGRPRKFLLSRMAIERLD 575
>gi|119503808|ref|ZP_01625890.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460316|gb|EAW41409.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 558
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 140/319 (43%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+ VE T+L VP + + L + S++ + G P E+MK
Sbjct: 280 FDPLETLQTVEAEGCTALHGVPTMF--ITELDHPRFGEFDLSSLRTGIMAGAPCPVEIMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ YG TE S L MTL PN + + V
Sbjct: 338 RVISEMHMEDILIGYGQTEVSP-LNHMTL-------------------PNDSLERRTETV 377
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P VE+KV + V G I TRG VM YW+ WL +GD+
Sbjct: 378 GRAVPWVEIKVIDQSNRVVAIGEKGEICTRGYSVMREYWNDPERTAETIDEAGWLHSGDL 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++D+ G V +VGR I GGEN+YP EVE L QHP I + V GI + ++ E V A
Sbjct: 438 ATMDEEGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAISEVQVFGIPHEKMGEEVCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+L E +E L+ C ++ +T FK PR V + +P+T
Sbjct: 498 WVQLNEGQSMTEDE----------------LKAFCNDQ-ITHFKIPR-HVRFVTEYPMTV 539
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R ++++ L
Sbjct: 540 TGKIQKFVMRDQMVAALNE 558
>gi|86159431|ref|YP_466216.1| AMP-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775942|gb|ABC82779.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 546
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 50/326 (15%)
Query: 11 VFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 68
+ IP F+ + + V+Q TSL VP + +A L + S++ + G
Sbjct: 251 IVIPLDNFDPVTVMRTVQQERCTSLYGVPTMF--IAELDHPEFHTFDFSSLRTGVMAGSP 308
Query: 69 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 128
P E+MK ++ YGMTETS T DP
Sbjct: 309 CPIEVMKRVQKDMHMPEVTICYGMTETSPVSTQSRTDDPI-------------------- 348
Query: 129 QPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTG 181
+ + VG+ PHVE+K+ + V G + TRG VML YW D + ++ G
Sbjct: 349 EKRVTTVGQVHPHVEIKIVDPTTGRVMPRGTPGELCTRGYSVMLGYWNDPHATRGAIDDG 408
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
W+ TGD+ +ID+ G V +VGR + GGEN++P EVE L PG+ + V+G+ +
Sbjct: 409 R-WMHTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPD 467
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
+ E ++A V+LR + L+ E +R +C+ K T +K PR +
Sbjct: 468 VKYGEELMAWVKLRPG----------------VSLTGEEIRAYCKGKIAT-YKIPRYY-K 509
Query: 302 WRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FP+T +GK+++ ++R + L
Sbjct: 510 FVDGFPMTVSGKVQKYKMRETAIQEL 535
>gi|407707040|ref|YP_006830625.1| acetate-CoA ligase [Bacillus thuringiensis MC28]
gi|407384725|gb|AFU15226.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis MC28]
Length = 577
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 546 -FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|330509006|ref|YP_004385434.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
gi|328929814|gb|AEB69616.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
Length = 569
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ S L AVE+ T++ VP + +A L + S++ + G P E MK
Sbjct: 281 FDPVSTLSAVEKERCTAVHGVPTMF--VAELEHPDFSKFDLSSLRTGIMAGSPCPIEFMK 338
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + +++ YG TE+S +T M+ D +L+ + V
Sbjct: 339 KVSTLMNMREVVITYGQTESSPGIT-MSSTDDSLDL-------------------RVSTV 378
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GKP PH E+K+ + + G I RG +M Y++ +A E WL TGD
Sbjct: 379 GKPMPHTEMKIVDPKTGKIVPRGETGEICARGYMIMREYYNNPVATEQCIDEEGWLHTGD 438
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+G++D+ + GR + GGEN+YP E+E L HP I + V+G+ + + E ++
Sbjct: 439 LGTLDENDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPAISDVQVIGVPDKKYGEELM 498
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L+ + +S N+ E ++ C+ + + FK PR ++ + FP+T
Sbjct: 499 AWIKLK----------NGASANQ------EEIKAFCKGR-IAHFKIPR-YIKFVDDFPMT 540
Query: 310 STGKIRRDEVRREVMSHL 327
+GKI++ ++R + + L
Sbjct: 541 VSGKIQKYKMREDSIKEL 558
>gi|229098982|ref|ZP_04229917.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-29]
gi|228684480|gb|EEL38423.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-29]
Length = 582
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 291 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 348
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 349 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 401
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 402 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 447
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 448 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 507
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 508 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 550
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 551 -FRDELPKTTVGKILRRVLIDEEKRK 575
>gi|209514969|ref|ZP_03263838.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504595|gb|EEA04582.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 564
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 145/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++K+ LE VE T+L VP + +A L + G +++ + G P E+MK
Sbjct: 279 FDAKAVLETVEAEKCTALHGVPTMF--IALLSHPEFGRYGLGTLRTGIMAGSPCPVEVMK 336
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ AYGMTET+ ++F + D P + T V
Sbjct: 337 RVMERMNMQQVTIAYGMTETAP-ISFQSALDD--------PPEYRVST-----------V 376
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ + V G +LTRG VM YW+ E W+ TGD+
Sbjct: 377 GRVQPHLEVKIVDEWGRTVLRGAMGELLTRGYSVMCGYWNDPEKTSEAIDQEGWMHTGDL 436
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+ID+ G +VGR I GGEN+ P +VE L ++ I + VG+ + + E + A
Sbjct: 437 ATIDEDGYCRIVGRSKDLIIRGGENICPRDVEEFLYRYSKIQDVQCVGVPDPKYGEELCA 496
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ LR +E +R CR + + +K PR +V + FP+T
Sbjct: 497 CIILRPGAA----------------ADAEEIRSFCRGR-IAHYKIPR-YVAFLDRFPMTV 538
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R+++ K
Sbjct: 539 TGKIQKFVLRKQMTEAFK 556
>gi|410895361|ref|XP_003961168.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 590
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 151/330 (45%), Gaps = 49/330 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+ M + GA VF +++ K L+ ++ T L P I D+ + K SV
Sbjct: 292 ITMAVHGASLVFPSAEYKLKVLLDTLQDERCTILFGTPTIFVDIINYQHLNKY--DLSSV 349
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ GG ELMK+ + ++ YG TE S P AF
Sbjct: 350 YGGVIGGSPCAPELMKDIIFTLGIKEISIGYGCTELS-------------------PCAF 390
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQF 172
N P + + VG PH E K+ + + V G I+ RG VM YW D+
Sbjct: 391 SN-HPKDSQERRTQTVGYILPHTEAKIVNPSTGEVAPLGETGDIMVRGYCVMQGYWGDED 449
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A+ SVS + W TGD GS+D G + + GR I GGEN+YP E+E L HP +
Sbjct: 450 KAEESVSE-DGWYRTGDSGSLDAYGYLQIKGRAKDLIIRGGENIYPAEIEKTLHTHPKVQ 508
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VVG+ + R+ E + A ++L + Q S +E +R +CR K +
Sbjct: 509 EAQVVGVEDFRMGEEICAFIKLGDG---------QDSAVQE-------IRDYCRGK-IAS 551
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
+K PR +VL+ FP++S+GKI + E+R++
Sbjct: 552 YKIPR-YVLFVNRFPISSSGKILKSELRKQ 580
>gi|379746120|ref|YP_005336941.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|379753366|ref|YP_005342038.1| feruloyl-CoA synthetase [Mycobacterium intracellulare MOTT-02]
gi|378798484|gb|AFC42620.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
gi|378803582|gb|AFC47717.1| feruloyl-CoA synthetase [Mycobacterium intracellulare MOTT-02]
Length = 499
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 43/333 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ +F+ + V VT+ VP +++ + ++ ++ +++
Sbjct: 199 LSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVPTMLSRIVAVL--EQQSAELPTLR 256
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
GG + L++ A + P+ ++AYG+TETSS++ +T D L +
Sbjct: 257 NFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSSTIAVLTPEDHRLAHEARDDAVAR 316
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+T VG+P P +E+++ ++ G G + RG V RY +
Sbjct: 317 RLT----------SVGRPVPGIEVQIRAEDGTVLGPGETGELFVRGPQVSGRYTE----I 362
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV + W T D+ +D+ G +++ GR + I GGEN+ P EVE VL++HP + +V
Sbjct: 363 GSVLDAQGWFATRDVAMLDEDGYLFIGGRSDDTIIRGGENIAPSEVEDVLIEHPDVREVV 422
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ +A + +VA + ES+ + E LR+ R K L G +
Sbjct: 423 VVGLDDAEWGQAIVAVI-------VPESDTAP---------APEQLREFARSK-LRGSRT 465
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P V +R P T TGK+ +RRE++ LK
Sbjct: 466 PDRIV-FRDELPTTPTGKV----LRREILEDLK 493
>gi|355571892|ref|ZP_09043100.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
gi|354824988|gb|EHF09223.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 46/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F + L+ +E+ T+L VP + +A L + ++++ + G P E+
Sbjct: 276 PTFNAGEVLQCIEKERCTALHGVPTMF--IAELSHPDFSRYSMETLRTGIMAGSPCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MKE ++++ YG TET+ +T T DP + +
Sbjct: 334 MKEVNRKMHMSEIVIVYGQTETAPGITMTTTRDPL--------------------ERRVS 373
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH E+K+ + VG I RG VM Y++ A + + W T
Sbjct: 374 TVGRVFPHTEIKIIDPKTGRIVPRGEVGEICARGYCVMKCYYNNPSATHATLDADRWNHT 433
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+G++D G V +VGR + GGEN+YP E+E L HP I + V+G+ + + E
Sbjct: 434 GDLGTMDAEGYVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIADVYVIGVPDEKYGEE 493
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A W E K ++ E +R+ CR K + +K PR +V + FP
Sbjct: 494 LMA-------WIMVE---------KGETMTGEEVREFCRGK-IAHYKIPR-YVKFVTEFP 535
Query: 308 LTSTGKIRRDEVR 320
+ +GKI++ ++R
Sbjct: 536 MNISGKIQKYKMR 548
>gi|407696003|ref|YP_006820791.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253341|gb|AFT70448.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 51/322 (15%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGG 68
V IP FE + L A++Q + VP ++ ++ + D S++ +L G
Sbjct: 228 VIIPMFEPLAVLRAIQQERILEAFLVPTMI----RMVLSHPDFAQYDLSSLQHLLYGASP 283
Query: 69 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 128
+ S L+ A + P+A+ + AYGMTE S +++ +T P T
Sbjct: 284 IDSTLLNRAREALPQARFLQAYGMTELSPTVSILT---PDWHTE------------EGFR 328
Query: 129 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ + G+P P VE+++ D + V G I+ RG VM YW+ KP + +
Sbjct: 329 SGKMMSAGRPLPMVEMRIVDDNDNPVPAHTHGEIVVRGPVVMQGYWN----KPEQTDDAL 384
Query: 184 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
W+ TGD G +D+ G V++V R I +GGENVY EVE +LQ P + V+GI
Sbjct: 385 RGGWMHTGDAGYMDEDGFVYVVDRIKDMIVTGGENVYSAEVEEAVLQLPQVAQCAVIGIP 444
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L++ S D+ L HC+ + +K PR
Sbjct: 445 DDDWGERVHAAVVLQDG---SALELDE-------------LMAHCKTL-IANYKIPRSLE 487
Query: 301 LWRKPFPLTSTGKIRRDEVRRE 322
+ R PL+ GK+ + ++R E
Sbjct: 488 V-RSELPLSPAGKLLKYKLREE 508
>gi|424922517|ref|ZP_18345878.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
gi|404303677|gb|EJZ57639.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
fluorescens R124]
Length = 565
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+ V + T L VP + +A L + + S++ + G P E+M+
Sbjct: 284 FDPLLTLQTVAEEQATGLYGVPTMF--IAMLDQPLRGEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T PN + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPNDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNSQATAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHNASELE----------------LQAWCKER-IAHFKTPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|398916882|ref|ZP_10657938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
gi|398173935|gb|EJM61749.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM49]
Length = 565
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 144/319 (45%), Gaps = 45/319 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVADEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKS 329
TGKI++ +R + L+S
Sbjct: 544 TGKIQKFRMREISIEELRS 562
>gi|423440742|ref|ZP_17417648.1| hypothetical protein IEA_01072 [Bacillus cereus BAG4X2-1]
gi|423449090|ref|ZP_17425969.1| hypothetical protein IEC_03698 [Bacillus cereus BAG5O-1]
gi|423463806|ref|ZP_17440574.1| hypothetical protein IEK_00993 [Bacillus cereus BAG6O-1]
gi|423533159|ref|ZP_17509577.1| hypothetical protein IGI_00991 [Bacillus cereus HuB2-9]
gi|423541578|ref|ZP_17517969.1| hypothetical protein IGK_03670 [Bacillus cereus HuB4-10]
gi|401128539|gb|EJQ36228.1| hypothetical protein IEC_03698 [Bacillus cereus BAG5O-1]
gi|401171422|gb|EJQ78652.1| hypothetical protein IGK_03670 [Bacillus cereus HuB4-10]
gi|402418515|gb|EJV50810.1| hypothetical protein IEA_01072 [Bacillus cereus BAG4X2-1]
gi|402421013|gb|EJV53280.1| hypothetical protein IEK_00993 [Bacillus cereus BAG6O-1]
gi|402464200|gb|EJV95898.1| hypothetical protein IGI_00991 [Bacillus cereus HuB2-9]
Length = 561
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|409359014|ref|ZP_11237371.1| fatty-acyl-CoA synthase [Dietzia alimentaria 72]
Length = 549
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 144/314 (45%), Gaps = 47/314 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ +++L AVEQ TSL VP + +A L +++ + G P
Sbjct: 266 PAFDPEASLRAVEQETCTSLYGVPTMF--IAELALEDFDSYDLSTLRTGIMAGSPCPEST 323
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M++ + ++ YGMTETS T T D +++ +
Sbjct: 324 MRQVIDKMNMDEVSICYGMTETSPVST-QTRSDDSMDR-------------------RVA 363
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV-WLD 186
VG+ P++E+K+ + G TRG VML YW++ AK + + E W+
Sbjct: 364 TVGRVGPNLEIKIVDPSTGETLPRGEAGEFCTRGYSVMLGYWNE-PAKTADAVDEAGWMR 422
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGDIG +DD G V + GR + GGEN+YP EVE L HP I+ V+G+ + + E
Sbjct: 423 TGDIGVMDDDGYVTITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGVPDTKYGE 482
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A VRL K L++E L + K L K PR +V F
Sbjct: 483 ELMAWVRL---------------KPGRDDLTAEQLHEFATGK-LARHKIPR-YVHVVDEF 525
Query: 307 PLTSTGKIRRDEVR 320
P+T TGK+R+ ++R
Sbjct: 526 PMTVTGKVRKVDMR 539
>gi|407697759|ref|YP_006822547.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255097|gb|AFT72204.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 148/329 (44%), Gaps = 48/329 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
+ L+ G +V IP F ++ AVE+H VT ++ VP ++ L V SV++
Sbjct: 218 SQLLSGGANVIIPGFSPEALTAAVERHGVTDMLLVPTMIQMLVDSEAVVSA--DLSSVRR 275
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+L G + ++ A P A + YGMTE S TF P + G
Sbjct: 276 VLYGASPISEAVLDRALARLPDAGFVQLYGMTELSPIATF---------NPPE--NHLGE 324
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKP 176
+H+ G+ VE+++ D ++ VG ++ RG +M YW+ +P
Sbjct: 325 ARERGLHK----AAGRATLGVEVRIVGDDNNELPPGQVGEVVVRGDTLMQGYWN----RP 376
Query: 177 SVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
TG+ W+ TGD G +D G +++V R I SGGENVY EVE + +HP +
Sbjct: 377 E-ETGKAIVDGWMHTGDGGYLDADGYLFVVDRVKDMIISGGENVYSVEVENTIAEHPAVA 435
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+GI + E V A V K E + E++ C+ + + G
Sbjct: 436 QCAVIGIPDDHWGEAVHAVVL---------------PKPGEAIGGDELI-TFCKAR-IAG 478
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+K PR + +P P++ GKI + E+RR
Sbjct: 479 YKCPRSVEVRDQPLPMSGAGKILKTELRR 507
>gi|229118011|ref|ZP_04247371.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock1-3]
gi|228665460|gb|EEL20942.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock1-3]
Length = 577
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 546 -FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|423377634|ref|ZP_17354918.1| hypothetical protein IC9_00987 [Bacillus cereus BAG1O-2]
gi|423547811|ref|ZP_17524169.1| hypothetical protein IGO_04246 [Bacillus cereus HuB5-5]
gi|423622402|ref|ZP_17598180.1| hypothetical protein IK3_01000 [Bacillus cereus VD148]
gi|401178248|gb|EJQ85428.1| hypothetical protein IGO_04246 [Bacillus cereus HuB5-5]
gi|401261122|gb|EJR67286.1| hypothetical protein IK3_01000 [Bacillus cereus VD148]
gi|401638002|gb|EJS55754.1| hypothetical protein IC9_00987 [Bacillus cereus BAG1O-2]
Length = 561
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|254819980|ref|ZP_05224981.1| feruloyl-CoA synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 491
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 157/333 (47%), Gaps = 43/333 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ +F+ + V VT+ VP +++ + ++ ++ +++
Sbjct: 191 LSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVPTMLSRIVAVL--EQQSAELPTLR 248
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
GG + L++ A + P+ ++AYG+TETSS++ +T D L +
Sbjct: 249 NFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSSTIAVLTPEDHRLAHEARDDAVAR 308
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+T VG+P P +E+++ ++ G G + RG V RY +
Sbjct: 309 RLT----------SVGRPVPGIEVQIRAEDGTVLGPGETGELFVRGPQVSGRYTE----I 354
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV + W T D+ +D+ G +++ GR + I GGEN+ P EVE VL++HP + +V
Sbjct: 355 GSVLDAQGWFATRDVAMLDEDGYLFIGGRSDDTIIRGGENIAPSEVEDVLIEHPDVREVV 414
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ +A + +VA + ES+ + E LR+ R K L G +
Sbjct: 415 VVGLDDAEWGQAIVAVI-------VPESDTAP---------APEQLREFARSK-LRGSRT 457
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P V +R P T TGK+ +RRE++ LK
Sbjct: 458 PDRIV-FRDELPTTPTGKV----LRREILEDLK 485
>gi|407715183|ref|YP_006835748.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
gi|407237367|gb|AFT87566.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
Length = 576
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFASYDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + ++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWGDEEK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ S+ G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 435 TRESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ +A+ E V A V LR Q ++E ++Q C + + +
Sbjct: 493 VQVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFC-QGQIAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 536 KVPR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|187925861|ref|YP_001897503.1| AMP-binding domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717055|gb|ACD18279.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 576
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGAKMVFPGEGFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFATYDFSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGAIVPVGETGELCTRGYSVMQGYWGDEAK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ S+ G W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I
Sbjct: 435 TRESIVDG--WMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A V LR Q +++E ++Q C + +
Sbjct: 493 VQVFGVPDTKYGEEVCAWVVLRSGEQ----------------VTAEEIQQFCH-GQIAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P+ ++ + P+T TGK+++ +R +++S LK
Sbjct: 536 KVPK-YIRFVDELPMTVTGKVQKFIMREQMISELK 569
>gi|406029174|ref|YP_006728065.1| acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
gi|405127721|gb|AFS12976.1| Acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
Length = 467
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 201 FLRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAV 256
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 257 TGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 304
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG ++ RG VM Y D A E
Sbjct: 305 TTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEG 350
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R
Sbjct: 351 WLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDER 410
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 411 MGQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFL 450
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 451 DSLPLNATGKVMKDQLR 467
>gi|238025755|ref|YP_002909986.1| AMP-binding domain-containing protein [Burkholderia glumae BGR1]
gi|237874949|gb|ACR27282.1| AMP-binding domain protein [Burkholderia glumae BGR1]
Length = 590
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 61/343 (17%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF F+ + LEAV+ T+L VP + + + GR +
Sbjct: 285 LACVSAGAKMVFPGAAFDPLATLEAVQAERCTALHGVPTMF-----IAELDHPEFGRFDL 339
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ + G G P E+M+ A++ AYGMTETS P
Sbjct: 340 RTLRTGIMAGSPCPIEIMRRVVAEMHMAEVTIAYGMTETS-------------------P 380
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-- 169
+F + T +S+ + + VG+ PH+E K+ + V G + TRG VM YW
Sbjct: 381 VSFQSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMSGYWCD 439
Query: 170 -----DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 224
L + ++ G W+ TGD+ + D+ G +VGR + GGEN+YP E+E
Sbjct: 440 GAGDGGDALTRAAIVDG--WMHTGDLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEF 497
Query: 225 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 284
L +HP I V G+ +A+ E V A V LR L +E LR+
Sbjct: 498 LFRHPKIQSAQVFGVPDAKYGEEVCAWVVLRAGET----------------LDAEALREF 541
Query: 285 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
CR + + +K PR +V + + P+T TGK+++ +R ++ L
Sbjct: 542 CRGQ-IAHYKVPR-YVRFVEALPMTVTGKVQKFVMREAMIDEL 582
>gi|167033483|ref|YP_001668714.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859971|gb|ABY98378.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 557
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTCATDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV +DG + +G + TRG VML YW+ A + W+ TGD+
Sbjct: 376 GRTQPRLENKVIDNDGGTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDEDGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE E LR+ + + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAASE----------------EELREWAKAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVR 320
TGK+++ +R
Sbjct: 538 TGKVQKFRMR 547
>gi|332285893|ref|YP_004417804.1| acyl-CoA synthetase [Pusillimonas sp. T7-7]
gi|330429846|gb|AEC21180.1| acyl-CoA synthetase [Pusillimonas sp. T7-7]
Length = 500
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 53/334 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A+ VG + F++ AL+A+EQ +T P ++ L L K S+K
Sbjct: 209 FALFEVGGSLTILRDFDAGEALQAIEQGKLTGAWLAPIMLNRLLALPESKDY--DLSSLK 266
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ GG P++ ++ + FP + + AYG+TET S T M G+ + G
Sbjct: 267 WVVGGGERTPAQRIEAFGSLFPNGRYVDAYGLTETCSGDTMMQ--------AGREIEKIG 318
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDG------SSHVGRILTRGAHVMLRYW--DQF 172
+ G+ HV +++ DG + H+G I G V YW DQ
Sbjct: 319 SA-------------GRALSHVRIQI-RDGEGRLQSAGHIGEICLWGPKVTRGYWKDDQ- 363
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ S + W +GD+G +D+ G ++LV R+ + SGGEN+ EVE VL Q P I
Sbjct: 364 --RTEESFFDDWFRSGDMGYLDEDGFLFLVDRKKDMVISGGENIASSEVERVLYQLPDIE 421
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
V+G+ +A+ E VVA LRE L+ + L+ HCR K + G
Sbjct: 422 EAAVIGLPDAKWGERVVAVAVLREG----------------ATLTLDALQAHCRGK-IGG 464
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 326
FK PR V+ + P +GK+ + +R E+ +
Sbjct: 465 FKIPRQLVVL-EALPRNPSGKVLKRVLRDELAAQ 497
>gi|192288893|ref|YP_001989498.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192282642|gb|ACE99022.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 564
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 152/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ L+ + T+L VP + +A L + S+
Sbjct: 264 LASVTSGAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ ++ ++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPVEVMRRVNDAMNMREVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLA 174
+ + + + VG+ PHVE+KV DG G + TRG VML YWD+
Sbjct: 363 QSAVDDP-EERRVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDEAEK 421
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 422 TADVLDAAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 481
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A+ R E + A VR R L+++ +R C + + K
Sbjct: 482 QIFGVADDRYGEELCAWVRPRPGET----------------LTADDVRAFC-QGQIAHNK 524
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR ++ + FP+T TGKI++ +R +V S L
Sbjct: 525 IPR-YIEFVDEFPMTVTGKIQKFIMREKVESKL 556
>gi|379760289|ref|YP_005346686.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
gi|378808231|gb|AFC52365.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
Length = 467
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 201 FLRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAV 256
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 257 TGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 304
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG ++ RG VM Y D A E
Sbjct: 305 TTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEG 350
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R
Sbjct: 351 WLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDER 410
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 411 MGQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFL 450
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 451 DSLPLNATGKVMKDQLR 467
>gi|379745564|ref|YP_005336385.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|379752849|ref|YP_005341521.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
gi|378797928|gb|AFC42064.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|378803065|gb|AFC47200.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
Length = 467
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ + +E +E+ +T L P + L ++ K +++ +
Sbjct: 201 FLRGATMLPVAVFDIDTVVELIERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAV 256
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 257 TGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 304
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG ++ RG VM Y D A E
Sbjct: 305 TTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEG 350
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R
Sbjct: 351 WLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDER 410
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 411 MGQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFL 450
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 451 DSLPLNATGKVMKDQLR 467
>gi|374613671|ref|ZP_09686432.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373545653|gb|EHP72460.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 517
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 149/323 (46%), Gaps = 46/323 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L GA V + + + L +V +H +T+L+ VPA++ + V+ SV+ I+
Sbjct: 223 LYEGATTVVLRDVDPVAILNSVVRHRITNLLLVPAVIQMMLDAPGVEAA--DFSSVRAIV 280
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G + +++ + + F + + YG+TET+ S+T + +DP
Sbjct: 281 YGASPITDDVLMKGLDRF-GCEFLQVYGLTETTGSVTQLDEHDP---------------- 323
Query: 124 PNSVHQPQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 177
V +P + GKP P VEL + D V G + TR A M YW+ A +
Sbjct: 324 ---VGRPDLLRSCGKPYPWVELCIVDDDGREVPIGTVGEVWTRSAQNMRGYWNNPDATAA 380
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
T + WL TGD G ID G V+L R+ I SGGENVYP EVE VL+ HP + + ++
Sbjct: 381 TVTDDGWLKTGDAGYIDRDGFVYLNDRKKDMIVSGGENVYPTEVENVLMTHPAVGDVAII 440
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + + E V A + + EL+ + RE+ L GFK P+
Sbjct: 441 GIPDEKWGEAVKAVIV---------PTAGTAPTEAELI-------AYARER-LAGFKLPK 483
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
V + + P +GK+ + +R
Sbjct: 484 -SVDFAEVLPRNPSGKLLKRTLR 505
>gi|339487838|ref|YP_004702366.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838681|gb|AEJ13486.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 602
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 323 FDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 380
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 381 RVIGEMHMAEVQIAYGMTETSP-VSLQTGASDDLER---------RVT----------SV 420
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV +DG++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 421 GRTQPRLENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAESIDEEGWMHTGDL 480
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 481 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 540
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL S+E LR + + + FK PR F + FP+T
Sbjct: 541 WVRLHPGHT----------------ASAEELRDWAKAR-IAHFKVPRYFRFVDE-FPMTV 582
Query: 311 TGKIRRDEVR 320
TGK+++ +R
Sbjct: 583 TGKVQKFRMR 592
>gi|307352961|ref|YP_003894012.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
gi|307156194|gb|ADN35574.1| AMP-dependent synthetase and ligase [Methanoplanus petrolearius DSM
11571]
Length = 565
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 46/313 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F++++ L+ +++ T++ VP + +A L D+++ + G P E+
Sbjct: 275 PAFDAETVLKTIDEEKCTAVHGVPTMF--IAELKHPNFNKYRYDTLRTGIMAGSPCPIEV 332
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
M+ ++ YG TETS +T T DP + +
Sbjct: 333 MRAVNQKMHMTDIVIVYGQTETSPGVTMTTTNDPL--------------------EKRVA 372
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PHVELK+ + + G I RG VM Y++ A + W T
Sbjct: 373 TVGRVFPHVELKIVDPVTQKIVSRGEPGEICARGYVVMKCYYNNPSATRQTIDSDRWNHT 432
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+G +DD G +VGR + GGEN+YP E+E L +P I + ++G+ + + E
Sbjct: 433 GDLGIMDDDGYFRIVGRLKEMVIRGGENIYPREIEEFLHTNPKIEDVYIIGVPDEKYGEE 492
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V+++++ Q L+ + +++ C K + +K PR + + FP
Sbjct: 493 LMAWVKVKDNQQ----------------LTGDEIKEFCNGK-IARYKIPRYY-KFVDDFP 534
Query: 308 LTSTGKIRRDEVR 320
+T GKIR+ E++
Sbjct: 535 MTVAGKIRKHEMQ 547
>gi|332534272|ref|ZP_08410116.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036268|gb|EGI72740.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 577
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 151/317 (47%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++K+ L+ V+Q T+L VP + ++ L T +++ + G P ++M+
Sbjct: 295 FDAKTTLDVVQQEGCTALHGVPTMF--ISELELSNFTDYDLSTLRTGVMAGSTCPEQVMR 352
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYG TE S + +T D ++E Q V
Sbjct: 353 KVQTQMNMHQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTV 392
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ H E+K+ + + G + ++GA +M YW+ + GE WL +GD+
Sbjct: 393 GRALAHTEVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKTKATIDGEGWLHSGDL 452
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
G +D G V +VGR I GGEN+YP E+E VL +PGI + GI + + E V A
Sbjct: 453 GVMDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEVCA 512
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ +E + +L+ + +R+ ++K L FK PR + + + +P+T
Sbjct: 513 WIQPKE----------------DAVLNEQAIREFLKDK-LAYFKMPR-HIRFVENYPMTV 554
Query: 311 TGKIRRDEVRREVMSHL 327
TGK+++ ++R ++ L
Sbjct: 555 TGKLQKFKMREQMQEEL 571
>gi|423615093|ref|ZP_17590927.1| hypothetical protein IIO_00419 [Bacillus cereus VD115]
gi|401261949|gb|EJR68100.1| hypothetical protein IIO_00419 [Bacillus cereus VD115]
Length = 561
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E S KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFESVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTESIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|431802842|ref|YP_007229745.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793607|gb|AGA73802.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 557
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRDEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
A++ AYGMTETS ++ T LE VT V
Sbjct: 336 RVIGEMHMAEVQIAYGMTETSP-VSLQTGASDDLER---------RVT----------SV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV +DG++ +G + TRG VML YW+ A E W+ TGD+
Sbjct: 376 GRTQPRLENKVIDADGNTLPRGEIGELCTRGYSVMLGYWNNPKATAESIDEEGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL S+E LR + + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHT----------------ASAEELRDWAKAR-IAHFKVPRYFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVR 320
TGK+++ +R
Sbjct: 538 TGKVQKFRMR 547
>gi|358368603|dbj|GAA85219.1| AMP-binding enzyme [Aspergillus kawachii IFO 4308]
Length = 594
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 155/344 (45%), Gaps = 52/344 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 58
MA GA F F +K+AL V++ T+L VP + + +L+ L +G
Sbjct: 281 MATATHGAAIAFPTEAFNAKAALRTVQEEKCTALYGVPTMFIEELSLLDEGVIPNEGFQY 340
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK +L YGMTETS T DP
Sbjct: 341 LRTGIAAGSSIPAELMKRLHKVLNLTELTICYGMTETSPVSAMTTTDDPV---------- 390
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHVGRILTRGAH------VMLRYWDQ 171
+ VGK PHVE KV S D +++ I TRG +M YW+
Sbjct: 391 ----------DKRINTVGKLLPHVEAKVVSLDDHNNILPINTRGELAVSGYLLMKEYWND 440
Query: 172 FLAKPSV----STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
+ V + G+VW+ TGD S+ G + + GR I GGEN++P E+E LL
Sbjct: 441 PVKTAEVMVADNDGKVWMHTGDEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLT 500
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
+PG+I VG+ + R E V + RE ES K +RQ RE
Sbjct: 501 YPGVIDASAVGVPDERYGEAVAVFIIHRE----PESEAADEDK----------IRQWVRE 546
Query: 288 KNLTGFKAPRLFVLWRKP---FPLTSTGKIRRDEVRREVMSHLK 328
K L+ P+ +V + +P FP T++GK+++ ++R + + LK
Sbjct: 547 K-LSNHLVPK-YVFFLQPSELFPKTASGKVQKFKLREDAVKMLK 588
>gi|288553658|ref|YP_003425593.1| long-chain-fatty-acid--CoA ligase [Bacillus pseudofirmus OF4]
gi|288544818|gb|ADC48701.1| long-chain fatty-acid-CoA ligase [Bacillus pseudofirmus OF4]
Length = 567
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 144/330 (43%), Gaps = 51/330 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V +PKFE K L+ +E+ VT P + L +++ S++ L
Sbjct: 274 IMGGLTTVILPKFEVKDVLKTIEKQKVTLFPGAPTMYVALINDPNIQEY--DLSSIETCL 331
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ ++ KL+ YG+TETS P A N+
Sbjct: 332 SGAAPLPLEV-QQKFEKLSGGKLVEGYGLTETS-------------------PVAISNLI 371
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 177
+ + +G P P + + S + VG I RG VM YW++
Sbjct: 372 WG---ERKTGSIGLPWPDTDAAIISAETGEKADFGEVGEIAIRGPQVMKGYWNRPEETAK 428
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGD+G +D+ G ++V R+ I +GG N+YP E+E VL +H I V++
Sbjct: 429 VFKDD-WFLTGDMGYMDEEGYFYIVDRKKDMIIAGGFNIYPREIEEVLYEHDAIQEAVII 487
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G + E V A + L++ +E D Q+CR K+L FK PR
Sbjct: 488 GAPDEYRGETVKAFIVLKQGKSVTEEELD----------------QYCR-KHLAAFKVPR 530
Query: 298 LFVLWRKPFPLTSTGKI-RRDEVRREVMSH 326
L+ +R+ P T GKI RR V E H
Sbjct: 531 LYE-FREELPKTLVGKILRRVLVEEENKKH 559
>gi|398961392|ref|ZP_10678700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
gi|398152596|gb|EJM41112.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM30]
Length = 565
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 142/320 (44%), Gaps = 45/320 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+ V + T L VP + +A L + + S++ + G P E+M+
Sbjct: 284 FDPLLTLQTVAEEQATGLYGVPTMF--IAMLDQPLRGEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T PN + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPNDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW A W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNPVPRGTIGELCTRGYSVMLGYWSNPQATAEAIDEAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVNIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++ SE L+ C+E+ + FK PR F + FP+T
Sbjct: 502 WIKFHPGHTASELE----------------LQTWCKER-IAHFKMPRHFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLKSL 330
TGKI++ +R + LK++
Sbjct: 544 TGKIQKFRMREISIEELKTV 563
>gi|387900866|ref|YP_006331205.1| long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
gi|387575758|gb|AFJ84474.1| Long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
Length = 575
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 153/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV T+L VP + +A L + ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ G V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLIDGWMHTGDLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E + A + LR Q +E + +R C + + +K
Sbjct: 493 QVFGLPDAKYGEELCAWIVLRAGEQMTEDD----------------VRAFC-QGQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|220920334|ref|YP_002495635.1| AMP-binding domain-containing protein [Methylobacterium nodulans
ORS 2060]
gi|219944940|gb|ACL55332.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
Length = 564
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 148/334 (44%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ + L AVE T+L VP + LA L S+
Sbjct: 264 LAAVSSGAAMVYPGEGFDPLATLRAVEAERCTALYGVPTMF--LAELDHPDFARFDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P +M+ A + +L YGMTETS ++F + D LE
Sbjct: 322 RTGIMAGSPCPIAVMQRAVDRMHLTQLTICYGMTETSP-VSFQSAVDDPLER-------- 372
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ VG+ PH E+KV D + G + TRG VM YW
Sbjct: 373 -----------RVSTVGRIHPHTEVKVV-DAEGRIVPRGTPGELCTRGYSVMQGYWGDPE 420
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V W+ TGD+ ++D+ G +VGR + GGENVYP EVE L +HP I
Sbjct: 421 KTAEVRDAAGWMHTGDLATLDEDGFCNIVGRIKDLVIRGGENVYPREVEEFLYRHPAIQE 480
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + R E + A VRLR L++E LR HC +
Sbjct: 481 VQVFGVPDPRYGEELCAWVRLRPG----------------AALTAEGLRAHC-AGQIAHQ 523
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR +V + + FP T TGK+++ +R+ ++ L
Sbjct: 524 KIPR-YVEFVEEFPTTVTGKMQKYRMRQAMVEKL 556
>gi|375141128|ref|YP_005001777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821749|gb|AEV74562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 484
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 47/320 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F+ +E VE +T L P + L T+ K +++
Sbjct: 212 VASFLRGATMVPVAVFDVDRVVELVEAERITMLPGPPTLYHSLLTVADKTKLA----TLR 267
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL++ P L++ YG+TE + TL PG P+
Sbjct: 268 AAVTGAADIPVELIRRIREDLPFESLMTGYGLTEAGNV---------TLSRPGDSPEDVA 318
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
G P VE+++ DG +L RG +VM Y D +A
Sbjct: 319 T------------TAGLPCEDVEVRIADDGE-----VLVRGYNVMQGYLDDPVATAEAID 361
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G+ D G + +VGR+ GG N YP E+E LL+HP + V+G+
Sbjct: 362 PDGWLHTGDLGTFDAAGRLKIVGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVP 421
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R+ ++ A + +K+ +S + L R + + GFK PR
Sbjct: 422 DERMGQVGKAFI---------------VTKDDGPSISGDDLIDWSR-RRMAGFKVPRSVE 465
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
K PL +TGK+ +D +R
Sbjct: 466 FLDK-LPLNATGKVMKDHLR 484
>gi|418050096|ref|ZP_12688183.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353191001|gb|EHB56511.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 46/337 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ L VG V + ++++ AL + + VT+ + VPA++ DL ++ + G SV
Sbjct: 239 LGALGVGGTLVIMERWDASEALALIRREGVTTALLVPAMLDDL---VQAARRASGSYSVP 295
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
IL G +P+EL++ A + F + + YG TE S+ LT D +
Sbjct: 296 TILAGASTVPAELIRTAQDVF-GGSVFNVYGQTEVSAPLTATRRGDSADDIAN------- 347
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLA 174
+G+P P VE ++ + +G I RG ML Y+ A
Sbjct: 348 -------------TIGRPLPQVECRIADPRTGRTVDVGVIGEICARGYQQMLGYYRDPDA 394
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ W+ TGD+G++++ G + + GR I GGEN+ P EV LL H + +
Sbjct: 395 TAGTVDADGWVHTGDLGTMNERGYLTITGRLKELIIRGGENISPTEVSQCLLDHDSVQNV 454
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG+ + RL E+V A V + DQ + + L HC + L +K
Sbjct: 455 AVVGLPDDRLGELVAAVV-------VAGDGADQRALAAK-------LHDHCAAR-LARYK 499
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 331
P+ + + LT++GK+R +R+ ++ + S P
Sbjct: 500 IPQQW-FFTDELALTASGKVRSLVIRQMILDGVISSP 535
>gi|291405797|ref|XP_002719337.1| PREDICTED: acyl-CoA synthetase family member 2 [Oryctolagus
cuniculus]
Length = 615
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 35/328 (10%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M +M GA + P F+ K ALEA+ + + L P + D+ L + + +V
Sbjct: 320 MVCMMHGATLLLSSPSFDGKKALEAISREKGSYLYGTPTMFVDI--LNQPDFSTYDISTV 377
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ G P EL++ +L+ YG TE +S +TFM + TLE Q ++
Sbjct: 378 SGGVIAGSPAPPELIRAIIKKMDMKELVVVYGTTE-NSPVTFMNFPEDTLE---QKAESV 433
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 179
G V P++ Q GK A + G + RG VM YWD+
Sbjct: 434 GRVMPHTEAQILNTETGKLAK----------LNTPGELCIRGYCVMQGYWDEPQKTLEAV 483
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ + W TGDI S+D+ G +VGR I GGEN+YP E+E HP + + VVG+
Sbjct: 484 SQDKWYRTGDIASMDEQGFCRIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGV 543
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R+ E + AC+RL+ +E E ++ C+ K ++ FK PR +
Sbjct: 544 KDHRMGEEICACIRLKSGQTVTE----------------EEIKAFCKGK-ISHFKIPR-Y 585
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+++ +PLT +GKI++ ++R ++ L
Sbjct: 586 IVFVNDYPLTISGKIQKFKLREQMERRL 613
>gi|350635657|gb|EHA24018.1| hypothetical protein ASPNIDRAFT_121695 [Aspergillus niger ATCC
1015]
Length = 545
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 155/344 (45%), Gaps = 52/344 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 58
MA GA F F +K+AL V++ T+L VP + + +L L + +G
Sbjct: 232 MATATHGAAIAFPTEAFNAKAALRTVQEEKCTALYGVPTMFLEELNLLDEGEIPNEGFQY 291
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK +L YGMTETS T DP
Sbjct: 292 LRTGIAAGSSIPAELMKRLHKVLNLTELTICYGMTETSPVSAMTTTDDPI---------- 341
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHVGRILTRGAH------VMLRYWDQ 171
+ VG+ PHVE KV S D +++ I TRG +M YW+
Sbjct: 342 ----------DKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWND 391
Query: 172 FLAKPSV----STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
+ V G+VW+ TGD S+ G + + GR I GGEN++P E+E LL
Sbjct: 392 PVKTAEVMIADDDGKVWMHTGDEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLT 451
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
+PG+I VG+ + R E V + RE ES K +RQ RE
Sbjct: 452 YPGVIDASAVGVPDERYGEAVAVFIIHRE----PESEAADEDK----------IRQWVRE 497
Query: 288 KNLTGFKAPRLFVLWRKP---FPLTSTGKIRRDEVRREVMSHLK 328
K L+ P+ +V + +P FP T++GK+++ ++R + ++ LK
Sbjct: 498 K-LSNHLVPK-YVFFLQPTESFPKTASGKVQKFKLREDALTILK 539
>gi|395826678|ref|XP_003786543.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 572
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 52/323 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLP 70
P F+ K ALEA+ + + L P + D+ + + D + + G G P
Sbjct: 291 PVFDGKKALEAISKERGSILYGTPTMYVDILN----QPDFSSYD-ISSMCGGVIAGSPAP 345
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
EL++ N +L+ AYG TE +S +TFM + T+E +
Sbjct: 346 PELVRAIINKMNMKELVVAYGTTE-NSPVTFMNFPEDTVEQKAE---------------- 388
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG+ PH E ++ + + + G + RG VML YW + V + W
Sbjct: 389 ---SVGRIMPHTEAQILNKDAGTLAELNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKW 445
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGDI ++D+ G +VGR I GGEN+YP E+E HP + + VVG+ + R+
Sbjct: 446 YRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRM 505
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + AC+RL KN E + E+ + C+ K ++ FK PR ++++
Sbjct: 506 GEEICACIRL---------------KNGEKTTAEEI-KAFCKGK-ISHFKIPR-YIVFVT 547
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
+PLT +GK+++ ++R ++ HL
Sbjct: 548 NYPLTVSGKVQKFKLREQMERHL 570
>gi|418528737|ref|ZP_13094681.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
gi|371454214|gb|EHN67222.1| AMP-binding domain protein [Comamonas testosteroni ATCC 11996]
Length = 582
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + LEAV+ T L VP + +A L + +++ + G P E+MK
Sbjct: 297 FDPLTVLEAVQAEKCTGLHGVPTMF--IAELDHPRFAEFDLSTLRTGIMAGSPCPIEVMK 354
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS ++ + D LE + V
Sbjct: 355 RVVRDMHLSEITIAYGMTETSP-VSCQSDADTPLEK-------------------RVATV 394
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
GK PH+E+K+ + + G + TRG VM YW+ E W+ TGD
Sbjct: 395 GKVQPHLEVKIVDPSTGEIMPPGQSGELCTRGYSVMHGYWEDEARTREAIDAEQWMHTGD 454
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR + GGEN+YP E+E L +HP + + VVG+ + R E +
Sbjct: 455 LATMDAEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQDVQVVGVPDVRYGEELC 514
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A + ++ + E +R C+ + + +K PR ++ + + FP+T
Sbjct: 515 AWIIVKPGQELGEDE----------------VRDFCKGQ-IAHYKVPR-YIRFVQAFPMT 556
Query: 310 STGKIRRDEVRREVMSHL 327
TGKI++ +R E++ L
Sbjct: 557 VTGKIQKFRIRDEMIELL 574
>gi|395826676|ref|XP_003786542.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Otolemur garnettii]
Length = 615
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 52/323 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLP 70
P F+ K ALEA+ + + L P + D+ + + D + + G G P
Sbjct: 334 PVFDGKKALEAISKERGSILYGTPTMYVDILN----QPDFSSYD-ISSMCGGVIAGSPAP 388
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
EL++ N +L+ AYG TE +S +TFM + T+E +
Sbjct: 389 PELVRAIINKMNMKELVVAYGTTE-NSPVTFMNFPEDTVEQKAE---------------- 431
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG+ PH E ++ + + + G + RG VML YW + V + W
Sbjct: 432 ---SVGRIMPHTEAQILNKDAGTLAELNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKW 488
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGDI ++D+ G +VGR I GGEN+YP E+E HP + + VVG+ + R+
Sbjct: 489 YRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRM 548
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + AC+RL KN E + E+ + C+ K ++ FK PR ++++
Sbjct: 549 GEEICACIRL---------------KNGEKTTAEEI-KAFCKGK-ISHFKIPR-YIVFVT 590
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
+PLT +GK+++ ++R ++ HL
Sbjct: 591 NYPLTVSGKVQKFKLREQMERHL 613
>gi|395826680|ref|XP_003786544.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 3 [Otolemur garnettii]
Length = 602
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 52/323 (16%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLP 70
P F+ K ALEA+ + + L P + D+ + + D + + G G P
Sbjct: 321 PVFDGKKALEAISKERGSILYGTPTMYVDILN----QPDFSSYD-ISSMCGGVIAGSPAP 375
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
EL++ N +L+ AYG TE +S +TFM + T+E +
Sbjct: 376 PELVRAIINKMNMKELVVAYGTTE-NSPVTFMNFPEDTVEQKAE---------------- 418
Query: 131 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
VG+ PH E ++ + + + G + RG VML YW + V + W
Sbjct: 419 ---SVGRIMPHTEAQILNKDAGTLAELNAPGELCIRGYCVMLGYWGEREKTEEVVGQDKW 475
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGDI ++D+ G +VGR I GGEN+YP E+E HP + + VVG+ + R+
Sbjct: 476 YRTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQVQEVQVVGVKDNRM 535
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + AC+RL KN E + E+ + C+ K ++ FK PR ++++
Sbjct: 536 GEEICACIRL---------------KNGEKTTAEEI-KAFCKGK-ISHFKIPR-YIVFVT 577
Query: 305 PFPLTSTGKIRRDEVRREVMSHL 327
+PLT +GK+++ ++R ++ HL
Sbjct: 578 NYPLTVSGKVQKFKLREQMERHL 600
>gi|39933535|ref|NP_945811.1| AMP-binding protein [Rhodopseudomonas palustris CGA009]
gi|39647381|emb|CAE25902.1| possible fatty acid-CoA ligases [Rhodopseudomonas palustris CGA009]
Length = 517
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 52/336 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ L+ + T+L VP + +A L + S+
Sbjct: 217 LASVTSGAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSL 274
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ ++ ++ AYGMTETS P +F
Sbjct: 275 RTGIMAGAPCPVEVMRRVNDAMNMREVTIAYGMTETS-------------------PVSF 315
Query: 120 GNVTPNSVHQPQG---VCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQ 171
++V P+ VG+ PHVE+KV DG G + TRG VML YWD+
Sbjct: 316 ----QSAVDDPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDE 371
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I
Sbjct: 372 AEKTADVLDAAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 431
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + G+A+ R E + A VR R L+++ +R C + +
Sbjct: 432 QDVQIFGVADDRYGEELCAWVRPRPGET----------------LTADDVRAFC-QGQIA 474
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ +R +V S L
Sbjct: 475 HNKIPR-YIEFVDEFPMTVTGKIQKFIMREKVESKL 509
>gi|333977920|ref|YP_004515865.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821401|gb|AEG14064.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 554
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 46/327 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA V + F LE VE+ T+L VP + + L ++K S++ + G
Sbjct: 257 GATMVPLESFNPVRVLETVEKERCTALHGVPTMF--ITELEVLEKQPFDTSSLRTGIMAG 314
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
P E+MK + +++ YG TE S +T MT D LE
Sbjct: 315 APCPIEVMKAVVDRMGMKEIVITYGQTEASPGIT-MTRTDDPLEI--------------- 358
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVST 180
+ VG+ P VE+KV + + G I RG +VM Y+ A S
Sbjct: 359 ----RVSTVGRALPGVEVKVVDPATGEEVPRGYQGEICARGYNVMKGYYKMPEATASTID 414
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WL TGD+G +D+ G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 415 REGWLHTGDLGIMDEQGYVRITGRIKDMIIRGGENIYPREIEEFLHTHPKIKDVQVVGVP 474
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+++ E V+A ++L+E C ++E +R+ C K + +K P+ ++
Sbjct: 475 SSKYGEEVMAFIQLKEG-------CTA---------TAEEIREFCNGK-IARYKIPQ-YI 516
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ +P T+ GK+++ ++R + + L
Sbjct: 517 QFVSSYPTTANGKVQKFKLREQAIREL 543
>gi|340357346|ref|ZP_08679964.1| long-chain-fatty-acid-CoA ligase [Sporosarcina newyorkensis 2681]
gi|339617794|gb|EGQ22408.1| long-chain-fatty-acid-CoA ligase [Sporosarcina newyorkensis 2681]
Length = 567
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 151/343 (44%), Gaps = 64/343 (18%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V +PKF+ K+AL+ +++ T P I L + K S+K +
Sbjct: 271 VMKGHRMVLVPKFDFKTALKEIDKQKPTLFPGAPTIYIGLLNHPDLSKY--DLSSIKACI 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TETS P A N
Sbjct: 329 SGSASLPIEV-QEKFEQVTGGKLVEGYGLTETS-------------------PVALANFV 368
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 177
+ + + +G +G P P + + GSS +G I +G VM YW+ +P
Sbjct: 369 WDGLEK-RG-SIGVPWPDTDACILGPGSSESLPVGEIGEIAVKGPQVMTGYWN----RPD 422
Query: 178 VSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
T E W TGD+G +D+ G ++V R+ I + G N+YP E+E VL +HP I
Sbjct: 423 -DTAEAFRDGWFLTGDLGYMDEDGYFYIVDRKKDMIIASGFNIYPREIEEVLYEHPAIQE 481
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+V G+ + E V A + L++ +E + D +CR K L F
Sbjct: 482 CIVAGVPDPYRGETVKAYIVLKDGQSVTEKDLD----------------TYCR-KQLAAF 524
Query: 294 KAPRLFVLWRKPFPLTSTGKIRR----DEVRR---EVMSHLKS 329
K P+ + +R P T+ GKI R +E R+ EV LKS
Sbjct: 525 KVPKKYE-FRDDLPKTAVGKILRRSLVEEERKKQTEVQDTLKS 566
>gi|420149135|ref|ZP_14656316.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754197|gb|EJF37638.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 542
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS P G +H V
Sbjct: 317 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +DD G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDDDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|229492633|ref|ZP_04386436.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
gi|229320619|gb|EEN86437.1| long-chain-fatty-acid--CoA ligase [Rhodococcus erythropolis SK121]
Length = 529
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 155/332 (46%), Gaps = 55/332 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKGRDSVK 60
A + VGA V +P+F++ +ALE +E+ ++ VP + L L V K+ ++V
Sbjct: 236 AGICVGATLVLMPRFDATAALEIMEREKISVFAGVPTMYWGLLGVLDEVVKSGVDIETVA 295
Query: 61 K----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ ++GG LP E++ + F +++ YG++ETS F DP
Sbjct: 296 QNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFS---DPE-------- 343
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-------VGRILTRGAHVMLRYW 169
P+ +G P VE ++ DGS H VG + RG +VM Y+
Sbjct: 344 -----------SDPRPGSIGVPIWGVEARLV-DGSWHTIAGPDEVGELAIRGHNVMKGYF 391
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
++ A V + W TGD+ +D GN ++V R I GG NVYP E+E VLL HP
Sbjct: 392 NRPEATAEVMR-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEVLLTHP 450
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ + VVG+ + L E VVA V S + SES+ + S+ +
Sbjct: 451 AVSLVAVVGVPDTSLGEEVVAFVIREPSEEISESDLVEWSREQ----------------- 493
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+ +K PR + + P+T+TGKI + E+ +
Sbjct: 494 MAAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|254516352|ref|ZP_05128411.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
gi|219674775|gb|EED31142.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR5-3]
Length = 569
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 147/328 (44%), Gaps = 46/328 (14%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GA VF F+ + LE V+ T L VP + +A L + S++ +
Sbjct: 271 GATAVFPGESFDPLATLETVQAERCTVLHGVPTMF--IAELDHPQFDGFDLTSLRTGIMA 328
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P +M + ++ AYG TE S ++ +T D L+ +
Sbjct: 329 GAPCPVAVMNKVIERMHMHDVLIAYGQTELSP-ISHVTEIDDPLDKRVE----------- 376
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 180
VGKP PH+E K+ + + V G I TRG VM YWD+
Sbjct: 377 --------TVGKPGPHLETKIVDENNQLVPINERGEICTRGYSVMSAYWDEPERTAETID 428
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WL +GDIG +D+ G V +VGR I GGEN+YP EVE L HP I + V GI
Sbjct: 429 SEGWLHSGDIGIMDEDGYVRVVGRTKDMIIRGGENIYPREVEEFLHTHPAIQDVQVFGIP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ + E V A ++L+E L ++LR+ E+ +T FK P +
Sbjct: 489 HEKYGEEVCAWIQLQEGAD----------------LDEKLLREFSHEQ-ITHFKIPTK-I 530
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+ + FP+T TGK ++ +R ++ + L+
Sbjct: 531 RFVQEFPMTVTGKAQKFVMREQMEAELE 558
>gi|433650012|ref|YP_007295014.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433299789|gb|AGB25609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 537
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L +E+ C T + VP + + T S++ + G P E+
Sbjct: 255 PGFDPAVTLATIEKECCTGVYGVPTMFIAMQNYPDFANT--DLSSLRTGIMAGSVCPIEV 312
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK N +++ AYGMTETS ++ T + LE +
Sbjct: 313 MKHCVNDMNMSEVAIAYGMTETSP-VSCQTRIEDDLER-------------------RTA 352
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PH+E+KV + + G TRG +ML YW+ E W+ T
Sbjct: 353 SVGRAHPHIEVKVVDPDTGDIVERGQPGEFCTRGYSLMLGYWNDNEKTREAIDAEGWMHT 412
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G +VGR + GGENVYP E+E L HP I V+G+ + + E
Sbjct: 413 GDLAVMREDGYCNIVGRIKDMVIRGGENVYPREIEEFLYTHPDIEDAQVIGVPDEKYGEE 472
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R++ +++ ++ N + L +K PR +V FP
Sbjct: 473 LCAWIRMKPGRPALDADAIKAFANGK----------------LAHYKIPR-YVHVVDDFP 515
Query: 308 LTSTGKIRRDEVRRE 322
+T TGK+R+ E+R E
Sbjct: 516 MTVTGKVRKVEMREE 530
>gi|429216436|ref|YP_007174426.1| acyl-CoA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429132965|gb|AFZ69977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caldisphaera
lagunensis DSM 15908]
Length = 558
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 149/316 (47%), Gaps = 33/316 (10%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+GA ++ +PK + + +E++E++ S+ P + + KK S++KI G
Sbjct: 264 IGATNIILPKGDIQLIMESIEKYKANSMFAPPTVWIGIINHPDFKKY--DLSSIEKIYYG 321
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
+P E++ + FP AK ++ YG TE + + T + D + PG + N+
Sbjct: 322 AAIMPVEILNKLRKEFPNAKFVNYYGQTELAPAHTALLPEDHE-KKPGTAGKELLNMI-T 379
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+ G + +P G I+ RG H ML Y K + W
Sbjct: 380 ELMDDNGNIINEPY-------------KPGEIVGRGPHTMLGYLKN-EEKTLEAFAYGWF 425
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
+GDIG D +++V R+ IK+GGENV EVE V+ +HP + + V+G+ + +
Sbjct: 426 HSGDIGMWDSDHYLYVVDRKKDMIKTGGENVSSREVEEVIYKHPAVKEVAVIGLPDEKWI 485
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E V A V L++ ++ S+ L +E++ ++ R NL FKAP+ V++
Sbjct: 486 EKVTAIVVLKDGYEKSDK------------LKNEII-EYSRN-NLAHFKAPKD-VIFVDS 530
Query: 306 FPLTSTGKIRRDEVRR 321
P + +GKI + E+R
Sbjct: 531 LPKSPSGKILKRELRE 546
>gi|429749086|ref|ZP_19282231.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169054|gb|EKY10839.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 543
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 50/313 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + + S++ + G P E+MK
Sbjct: 258 FDATRTLEAVEKERCTSLYGVPTMF--ISELYVLDRHPYDLSSLRTGVMAGALCPPEIMK 315
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS P G +H V
Sbjct: 316 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 355
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 356 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSGD 415
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +DD G V + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 416 LAMMDDDGYVHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEVM 475
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 476 AWIKPKEG----------------VTLTEEELHNFCKGR-IAHYKVPR---YWKFVQEFP 515
Query: 308 LTSTGKIRRDEVR 320
+T +GKIR+ E+R
Sbjct: 516 MTISGKIRKVEMR 528
>gi|392392571|ref|YP_006429173.1| acyl-CoA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523649|gb|AFL99379.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 522
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 162/341 (47%), Gaps = 57/341 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+ ++ GA V F+ L +++ VT ++ +P +T +R+ D
Sbjct: 222 LCVMATGAQFVICDGFDPVEILRQIQKERVTYMLLLPP-----STYLRLIDAPAFGDYDV 276
Query: 58 -SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
SVK + GG ++++ +FP ++ +G TET + T++ T E
Sbjct: 277 SSVKVVHTSAGGTSPAIVQKMVEAFPNCEVYYGWGQTETGAG----TVHRITREM----- 327
Query: 117 QAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWD 170
++H P+ VG+P P +L++ + VG + +G + Y+
Sbjct: 328 ---------ALHHPEKTQSVGRPMPFFQLRIVDEAGKDVPQGEVGEGIAKGPAIFSGYYK 378
Query: 171 Q-FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
Q L +++ G W TGD+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP
Sbjct: 379 QPELTDETIADG--WTRTGDMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHP 436
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
++ V+G+ + E V+A ++LR + ++E +++HC+ ++
Sbjct: 437 AVLDCSVIGVPDKTFGEAVMAVIKLRAGYT----------------AAAEDIQEHCK-RD 479
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---REVMSHL 327
L+ +K PR +V + FP+ S GKI++ +R R + HL
Sbjct: 480 LSSYKKPR-YVEFLDEFPVDSAGKIQKFRLRKKYRGIYGHL 519
>gi|311107966|ref|YP_003980819.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
gi|310762655|gb|ADP18104.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
Length = 510
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 47/323 (14%)
Query: 5 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
V V IP+ F+ ++ L+A++ VT ++ VP+++ L + W G V++++
Sbjct: 210 FVAGASVAIPRGFQPRAVLQALQDDGVTEVLLVPSMIQMLLDEPGFAQYWLG--GVQRVI 267
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G + L+ A +FP+A+ + AYGMTET++++ + + G ++
Sbjct: 268 WGASPISRALLDRALAAFPQAEFVHAYGMTETAATVAI----NAEVREGGARTES----- 318
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSV 178
G+PA VE ++ + DGS VG + RG VM YW++ +
Sbjct: 319 -----------AGRPAIGVETRILAPDGSEAAPGAVGELAVRGPMVMQGYWNR-PEETQR 366
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGD D+ G +++V R I SGGEN+Y EVE VL +HP + V+G
Sbjct: 367 AFDHGWLLTGDAARQDEDGYLYIVDRLKDMIVSGGENIYGAEVEGVLARHPLVARCAVIG 426
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ +AR E V A + R + + ++ L +HCR+ L FK P+
Sbjct: 427 VVHARWGEAVHAVIVPRPG----------------MGVDADSLDRHCRQL-LAAFKCPKT 469
Query: 299 FVLWRKPFPLTSTGKIRRDEVRR 321
+ + P+++ GK+ + +R+
Sbjct: 470 YEFLNE-LPMSAAGKVLKSALRQ 491
>gi|302387340|ref|YP_003823162.1| AMP-dependent synthetase and ligase [Clostridium saccharolyticum
WM1]
gi|302197968|gb|ADL05539.1| AMP-dependent synthetase and ligase [Clostridium saccharolyticum
WM1]
Length = 527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ + GA ++S +E ++++ T L VP++ LA + +++ S+
Sbjct: 231 LSAVHAGAAMYVNQYYKSIGVMENIQKNSCTILNGVPSMF--LAMVKNSRRSEYDLSSLN 288
Query: 61 K-ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
I+ G PSE + L +YG TE+S ++T DP
Sbjct: 289 SGIIAGSAIHPSEYIN-ICKELKMEHLQPSYGQTESSPAITMTGYRDPICR--------- 338
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKV------CSDGSSHVGRILTRGAHVMLRYWDQFL 173
+ + GK P+ EL++ C + VG I +RG H+M Y+++
Sbjct: 339 -----------KALTAGKKIPYTELRIWDDERKCEAETGRVGEIQSRGYHIMKGYYNREK 387
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V E WL TGD G +D+ G +++ GR+ I GGEN+ P E+E +L P I
Sbjct: 388 ETERVLDEEGWLHTGDCGYLDEDGCLYMTGRKKELIIRGGENIAPVEIENCILDLPEIKD 447
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+A L E + AC+ + ++SE E +R+ R+ NL +
Sbjct: 448 VKVVGVAAQVLQEEIAACIIMEPGAEFSE----------------ERVREQVRQ-NLADY 490
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P+ +V FP ++ GK+ E+R+EV L
Sbjct: 491 KVPK-YVCRFDSFPFSNNGKVIIHELRQEVEKRL 523
>gi|398885459|ref|ZP_10640370.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
gi|398192488|gb|EJM79640.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
Length = 565
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLTTVAEEKATALYGVPTMF--IAMLDQPQRAQFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMNEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R ++ L+
Sbjct: 544 TGKIQKFRMREISIAELR 561
>gi|443468114|ref|ZP_21058351.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442897184|gb|ELS24180.1| Acetoacetyl-CoA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 566
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 45/310 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLTTLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+++ AYGMTETS +L+T P + + V
Sbjct: 336 RVIKEMHMSEVQIAYGMTETSPV---------SLQT-----------GPEDELELRVTTV 375
Query: 136 GKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ ++G +G + TRG VML YW+ A W+ TGD+
Sbjct: 376 GRTQPHLESKIVDAEGRIVPRGTIGELCTRGYSVMLGYWNNPQATAEAIDAGRWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S+D+ G V +VGR I GGEN+YP E+E HP + + V+GI ++ E +VA
Sbjct: 436 ASMDENGYVCIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
V+ +E E L+ +E+ + FK PR F + FP+T
Sbjct: 496 WVKFHPGHSATE----------------EELKAWAKER-IAHFKVPRHF-RFVDAFPMTV 537
Query: 311 TGKIRRDEVR 320
TGKI++ +R
Sbjct: 538 TGKIQKFRMR 547
>gi|374628530|ref|ZP_09700915.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
gi|373906643|gb|EHQ34747.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
Length = 566
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 46/314 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ ++ L +++ T++ VP + +A L DS++ + G P E+
Sbjct: 276 PAFDPEAVLRTIDKEKCTAVHGVPTMF--IAELKHPNFNKYKYDSLRTGIMAGSPCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK ++ YG TETS +T T DP + +
Sbjct: 334 MKAVNQKMNMRDIVIVYGQTETSPGVTMTTTDDPI--------------------EMRVS 373
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
VG+ PHVE+K+ + + G I RG VM Y++ A + W T
Sbjct: 374 TVGRTFPHVEIKIVDPVTQKIVLRGEPGEICARGYVVMKCYYNNPSATRQTIDADKWNHT 433
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+G +D G V +VGR + GGEN+YP E+E L +P ++ V+G+ + + E
Sbjct: 434 GDLGIMDGEGFVKIVGRLKEMVIRGGENIYPREIEEFLHTNPKVLDAYVIGVPDEKYGEE 493
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
++A V+L E L ++ E L++ C + + +K P+ +V + FP
Sbjct: 494 LMAWVKLHEG----------------LTMAGEELKEFC-DGQIARYKIPK-YVKFVDDFP 535
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 536 MTVSGKIRKGEMRE 549
>gi|221214286|ref|ZP_03587258.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
gi|221165941|gb|EED98415.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
Length = 575
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 153/338 (45%), Gaps = 55/338 (16%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV + T+L VP + +A L + ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ G V G + T+G VML YWD
Sbjct: 375 QSSTDDPLEK-RTTTVGRVQPHLEVKIVDPGGEIVPVGVTGELCTKGYSVMLGYWDD--- 430
Query: 175 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP
Sbjct: 431 --DAKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPK 488
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
I V G+ + + E + A + LR Q +E + +R C + +
Sbjct: 489 IQSAQVFGVPDPKYGEELCAWIVLRADEQMTEDD----------------VRAFC-QGQI 531
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 532 AHYKIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|300776376|ref|ZP_07086234.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
gi|300501886|gb|EFK33026.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
Length = 541
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 58/333 (17%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKK 61
GAC V IP F+ + L+AV + TSL VP + +A+LA K + D S++
Sbjct: 247 GACMV-IPNDSFDPEITLKAVSEEKCTSLYGVPTMFIAELAV-----KDFDSYDFSSLRT 300
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ G P E+MK+ N ++ YGMTETS T TL LE
Sbjct: 301 GVMAGSVCPPEIMKKVENLMNIKEMSICYGMTETSPVST-QTLIGTPLE----------- 348
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
Q VG H+E+K+ + + G + TRG VML+YW+
Sbjct: 349 --------KQVSTVGTVQDHLEIKIIDENGRTLKRGEHGELCTRGYSVMLKYWNDPENTK 400
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +D G + + GR I GGEN+ P+E+E L + I+ + +
Sbjct: 401 KVLDDARWMHTGDMAVMDKDGYITISGRIKDLIIRGGENISPKEIEDFLYTYTNILDVQI 460
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V+A V++R K +++E L+++C+ + + +K P
Sbjct: 461 IGVPSEKFGEEVMAWVKVR----------------KGFTITAEELQEYCKGR-IAHYKVP 503
Query: 297 RLFVLWR--KPFPLTSTGKIRRDEVRREVMSHL 327
+ W+ FP+T +GKIR+ E+R M L
Sbjct: 504 K---YWKFVDEFPMTISGKIRKVEMREISMREL 533
>gi|423521592|ref|ZP_17498065.1| hypothetical protein IGC_00975 [Bacillus cereus HuA4-10]
gi|401176840|gb|EJQ84033.1| hypothetical protein IGC_00975 [Bacillus cereus HuA4-10]
Length = 561
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ RG +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------PGEIGEIVVRGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGVECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|386843340|ref|YP_006248398.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103641|gb|AEY92525.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796631|gb|AGF66680.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 530
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 143/322 (44%), Gaps = 48/322 (14%)
Query: 7 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V + F+ + LEAV++ TSL VP + +A L S++ +
Sbjct: 244 GACMVIPARSFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMA 301
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK ++ YGMTETS ++ T + LE
Sbjct: 302 GSPCPVEVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRIEDDLEH-------------- 346
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 347 -----RTATVGRVLPHLEVKVVDPATGVTQPRGAAGELCTRGYSVMLGYWNEPEKTAEAI 401
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
W+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+
Sbjct: 402 DAGRWMHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGV 461
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RL 298
+ R E V+ACV + L+ E LR C + L +K P RL
Sbjct: 462 PHERYGEEVLACV---------------IPSDPADPLTLEELRDFCAGR-LAHYKIPSRL 505
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
+L FP+T +GK+R+ E+R
Sbjct: 506 QLL--DAFPMTVSGKVRKVELR 525
>gi|340795049|ref|YP_004760512.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340534959|gb|AEK37439.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 570
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 153/322 (47%), Gaps = 41/322 (12%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 70
P F +++ LEA TSL+ VP + MA+L L + + K D ++ + G P
Sbjct: 273 PVFNAENTLEAAHHGQATSLLGVPTMFMAELQLLDHLAEKGKKLDLSRLRTGVMAGTSCP 332
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
++ M+E + ++ YGMTETS + T+ D +E +
Sbjct: 333 TKTMREIIDILGIEEIGICYGMTETSP-VNHQTMPDDPVEKRVE---------------- 375
Query: 131 QGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E+K+ +DGS+ G + RG VM YWD E W+
Sbjct: 376 ---TVGRIGPHLEVKIVDADGSTVSRGTQGELPVRGYSVMQGYWDMPEKTAEAIDAEGWM 432
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
+GD+ ++D G V + GR + GGEN+YP E+E L +HP I + V+G+ + +
Sbjct: 433 HSGDLATMDTEGYVQITGRIKDMVIRGGENIYPREIEEFLYEHPDIADVQVIGVPDEKYG 492
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E ++A + L D+ + L+++ +R K L FK P+ ++ +
Sbjct: 493 EELMAWIIL-----------DEDAVADGRTLTADDIRTFSDGK-LAKFKIPK-YIHITEV 539
Query: 306 FPLTSTGKIRRDEVRREVMSHL 327
FP+T +GK+R+ E+R + + L
Sbjct: 540 FPMTISGKVRKVEMREKAIGIL 561
>gi|398866547|ref|ZP_10622035.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398240252|gb|EJN25938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 49/331 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
A+ G HV +P F ++ LE +EQ ++ ++ P ++ L + S+
Sbjct: 219 ALFFSGGTHVVLPSFIPQTVLETIEQERISEILLAPTMIQMLLDCRDKHPQLASLELGSL 278
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
I G + L+ A +FP A YGMTE + T ++ E Q
Sbjct: 279 TAIGYGASPITPVLLDRAREAFPAAGFFQGYGMTELAPMATSLSA-----EYHCQAHHDS 333
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
G + G+PA VE+++ + V G I+ RG +VML Y L
Sbjct: 334 GKM----------YSAGRPAICVEVRIVDVHDNEVPRGTVGEIIVRGPNVMLGY----LN 379
Query: 175 KPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
KP T E W+ TGD G +D+ G +++ R I SGGEN+Y EVE + HP
Sbjct: 380 KPQ-ETAEALRNGWMHTGDGGYMDEDGFIYVCDRLKDMIVSGGENIYSAEVETAIASHPA 438
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ I +GI ++ E V A + L+ +++ ++++ HCRE+ +
Sbjct: 439 VAQIAAIGIPCSKWGETVHAVIVLKPG---------EAATGEDII-------AHCRER-I 481
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
G+K PR V +R PL+S GK+ + E+R+
Sbjct: 482 AGYKCPR-SVEFRDALPLSSVGKVLKTELRK 511
>gi|254298706|ref|ZP_04966157.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
gi|157808515|gb|EDO85685.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
Length = 570
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 271 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 328
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 329 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 369
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 370 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 428 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ LR+ C + +K
Sbjct: 488 QVFGVPDSKYGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 531 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 562
>gi|167740791|ref|ZP_02413565.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|217423840|ref|ZP_03455340.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
gi|217392903|gb|EEC32925.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
Length = 576
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|226187518|dbj|BAH35622.1| probable fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 158/332 (47%), Gaps = 59/332 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSV 59
+A ++G VF+ +F LEAV++H T++ VP + L LI + T SV
Sbjct: 219 LAQSLMGGTQVFLSRFSPGIFLEAVDRHRPTTVGLVPTM---LQMLISHEDTASYDLTSV 275
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQ 117
+ + G + L+ + FP + YGMTET+ +++ P+ LE G+L +
Sbjct: 276 RVLRYGASPISPTLLGQVMQMFPNSAFAQGYGMTETA----HISVLSPSDHLEG-GELLR 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQF 172
+ G + P H E+++ + VG I+T G+H+ML YW+
Sbjct: 331 SAGRILP----------------HCEVRIVDPAGTELPPGEVGEIVTFGSHIMLGYWN-- 372
Query: 173 LAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 228
KP + T EV W+ TGD G +D+ G +++V R I +GGENVY EVE L +H
Sbjct: 373 --KP-IETAEVLRDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARH 429
Query: 229 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 288
+ V+G+ +++ E V A V LR ++SN D + LR H +
Sbjct: 430 ESVAACSVIGLPDSQWGERVHAVVVLR-----ADSNVD-----------VDALRAHVKTL 473
Query: 289 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ G+K PR F + P+ GK+ + ++R
Sbjct: 474 -IAGYKVPRSF-QFVDALPVNGAGKVLKRDLR 503
>gi|167826369|ref|ZP_02457840.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|226193138|ref|ZP_03788748.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225934738|gb|EEH30715.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 150/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|254184020|ref|ZP_04890611.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
gi|184214552|gb|EDU11595.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
Length = 570
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 271 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 328
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 329 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 369
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 370 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 428 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 488 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 531 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 562
>gi|121603384|ref|YP_980713.1| AMP-binding domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120592353|gb|ABM35792.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 579
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 147/334 (44%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA V+ F++ S L+ V+ T L VP + +A L + ++
Sbjct: 278 LACLTHGATIVYPNDGFDALSVLQTVQDERCTGLHGVPTMF--IAELDHPRFAEFDLSTL 335
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P+E+MK NS ++ AYGMTETS ++ P +
Sbjct: 336 RTGIMAGSPCPTEVMKRVVNSMNLGQITIAYGMTETSPVSCQSSIDTPLAK--------- 386
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ VG PH+E+K+ S + G TRG VM YWD
Sbjct: 387 -----------RVSTVGLVQPHLEIKIIDPESGEIVLPGVSGEFCTRGYSVMHGYWDDPA 435
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ W+ TGD+ ++D G V +VGR + GGEN+YP E+E L +HP +
Sbjct: 436 RTAESIDADGWMHTGDLATMDFEGYVNIVGRIKDMVIRGGENIYPREIEEFLYRHPKVQD 495
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + R E + A + R SE +R C+ + + +
Sbjct: 496 VQVVGLPDKRYGEELCAWIVTRPGETLSEDE----------------IRAFCKGQ-IAHY 538
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ +R E+ + L
Sbjct: 539 KVPR-YIRFVPGFPMTVTGKIQKFRIRDEMKTQL 571
>gi|53724018|ref|YP_104464.1| AMP-binding protein [Burkholderia mallei ATCC 23344]
gi|121601336|ref|YP_994632.1| AMP-binding protein [Burkholderia mallei SAVP1]
gi|126448872|ref|YP_001082538.1| AMP-binding protein [Burkholderia mallei NCTC 10247]
gi|167000139|ref|ZP_02265962.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
gi|52427441|gb|AAU48034.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 23344]
gi|121230146|gb|ABM52664.1| AMP-binding enzyme domain protein [Burkholderia mallei SAVP1]
gi|126241742|gb|ABO04835.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10247]
gi|243063942|gb|EES46128.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|404441742|ref|ZP_11006925.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403657859|gb|EJZ12613.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 502
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 159/337 (47%), Gaps = 43/337 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ F+++ + V + VTS VP ++ + ++ + +++
Sbjct: 198 LSNLYAGRKMVYLTHFDAERWVRLVAEEGVTSATVVPTMLDRIVAVLEAQGIPL--PTLR 255
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ GG +P L+++A + P ++AYG+TETSS++ +T D G
Sbjct: 256 TLAYGGSKVPLPLVRKALSLLPDVGFVNAYGLTETSSTIAVLTPDDHRAALAG------- 308
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
T + + G VG+P P +E+++ ++ G G + RG V +Y D
Sbjct: 309 --TDEGITRRLG-SVGQPVPGIEVQIRAEDGTVLGPGETGELFVRGEQVSGKYTDIG--- 362
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV + W T D+ S+D+ G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 363 -SVLDEQGWFPTRDVASLDEDGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPHVRDCA 421
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG + +++VA V + Q +E LR H R + L G +
Sbjct: 422 VVGADDPEWGQIIVAVVVAQPGQQP----------------DAEQLRSHVRAQ-LRGSRT 464
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPS 332
P V++R P +TGK+ +RRE++ L PS
Sbjct: 465 PDR-VVFRDELPTNATGKV----LRRELVDELNQDPS 496
>gi|254186486|ref|ZP_04893003.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194656|ref|ZP_04901087.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403520675|ref|YP_006654809.1| AMP-binding protein [Burkholderia pseudomallei BPC006]
gi|157934171|gb|EDO89841.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|169651406|gb|EDS84099.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403076317|gb|AFR17897.1| AMP-binding domain protein [Burkholderia pseudomallei BPC006]
Length = 570
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 271 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 328
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 329 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 369
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 370 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 428 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 488 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 531 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 562
>gi|296270005|ref|YP_003652637.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092792|gb|ADG88744.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 551
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 46/329 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ G V + K++ + ALE +E+ +T L VP L + R+ + S+
Sbjct: 262 MGTMLSGGGLVLMYKWDPQRALELIEREKITVLSGVPTNAWQLLSHPRLHE--YDISSLT 319
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I GG P +L++ T P + YGMTETS+ + +Y
Sbjct: 320 SISYGGAPAPPKLLERITELLPNRTPANGYGMTETSA----LAIY--------------- 360
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAK 175
N + +P VG+P P +++KVC + VG + RG V++ YW++ A
Sbjct: 361 NSGDDYRRKPD--SVGRPLPVIDVKVCDPAGNELPRGEVGELHIRGPIVIMGYWNRPDAT 418
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+G W+ TGD+ ID+ G V++V R + GGENVY EVEA + +HP +
Sbjct: 419 AETFSGG-WVRTGDLARIDEEGFVYIVDRAKDMVIRGGENVYCAEVEAAIFEHPAVDDAA 477
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+GI + L E V A VRL+ ++E L++ R + L FK
Sbjct: 478 VIGIPDEELGEQVGAVVRLKPG----------------ATATAEELQEFLRGR-LAAFKV 520
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVM 324
P P + GKI + ++ E +
Sbjct: 521 PTKIWFRDAELPRNAAGKILKTRLKEETL 549
>gi|239827965|ref|YP_002950589.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
gi|239808258|gb|ACS25323.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
Length = 557
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 147/327 (44%), Gaps = 49/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M + +PKF++++ L+ +E+ T P + +A L + S+K +
Sbjct: 271 IMQAYKMILLPKFDAETTLKTIEKLRPTLFPGAPTMY--IALLNHPNLSRYDLSSIKVCI 328
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KLI YG+TE S ++D G
Sbjct: 329 SGSAPLPVEV-QEKFEKLTGGKLIEGYGLTEASPVTHSNFVWD-------------GERV 374
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPS 177
S +G P P E K+ S + + +G ++ RG VM YW+Q +
Sbjct: 375 KGS--------IGVPWPDTEAKIISLETGEEAKVNEIGELVVRGPQVMKGYWNQPHETEN 426
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + WL TGD+G +D+ G ++V R+ I + G N+YP EVE VL +HP + VVV
Sbjct: 427 V-LRDGWLYTGDVGYMDERGYFYIVDRKKDMIIASGYNIYPREVEEVLYEHPKVQEAVVV 485
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + E V A V L++ Q +E DQ +++ L +K PR
Sbjct: 486 GVPHEYRGETVKAFVVLKQGEQCTEEELDQFMRSR-----------------LAAYKVPR 528
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVM 324
++ +RK P T+ GKI R + E M
Sbjct: 529 IYE-FRKELPKTAVGKILRRALLEEEM 554
>gi|149370391|ref|ZP_01890080.1| acyl-CoA synthase [unidentified eubacterium SCB49]
gi|149355942|gb|EDM44499.1| acyl-CoA synthase [unidentified eubacterium SCB49]
Length = 540
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 53/331 (16%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
GAC V IP F++ AL+AVE+ TSL VP + +L K S++ +
Sbjct: 251 GACMV-IPSEGFDAALALKAVEEEKCTSLYGVPTMFIAELSLENFKDY--NLSSLRTGVM 307
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P E+MK + + YGMTETS P L G TP
Sbjct: 308 AGATCPEEIMKRVQSEMNMKDVTVCYGMTETS---------------PVSLQTTIG--TP 350
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 178
Q VG H+E+K+ + + ++ G + RG VML YW+ V
Sbjct: 351 ---LDKQVSTVGTVMEHLEVKIINPENGNIQPIGEEGELCVRGYSVMLGYWNNIETTQEV 407
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
W+ +GD+ +DD G V + GR I GGEN+ P+ +E L HP ++ I ++G
Sbjct: 408 IDNARWMHSGDLAVMDDEGYVCISGRIKDLIIRGGENISPKSIEDFLYTHPKVLDIQIIG 467
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E ++A V+L Q S+S KN+ + +C K
Sbjct: 468 VPSEKYGEEIMAWVKLHHGVQCSDSELLAFCKNQ--------IAHYCVPK---------- 509
Query: 299 FVLWR--KPFPLTSTGKIRRDEVRREVMSHL 327
W+ +P+T +GKIR+ E+R + L
Sbjct: 510 --YWKFVNEYPMTVSGKIRKVEMRETAIKEL 538
>gi|237814343|ref|YP_002898794.1| AMP-binding domain protein [Burkholderia pseudomallei MSHR346]
gi|237505976|gb|ACQ98294.1| acyl-CoA synthetase family member 2 [Burkholderia pseudomallei
MSHR346]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGARMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|453078814|ref|ZP_21981540.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452755967|gb|EME14385.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 475
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 50/320 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A ++ GA + + + + L+ VE+ +T L P + L + R + S++
Sbjct: 206 VASMIRGATVLPVAVLDVEDVLDLVEREKITMLPGPPTLYQSLLSASRDRDL----SSLR 261
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P EL+K N P +++ YG++E ++ T PG
Sbjct: 262 AAVTGSADIPVELIKRIKNELPFETIMTGYGLSEGGTA---------TASRPGD------ 306
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
+ VG P +++++ DG +L RG +VM Y D A
Sbjct: 307 ------TFEQIATTVGTPCDGIDVRIADDGE-----VLIRGYNVMQGYLDDPGATAEAID 355
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D GG + + GR+ GG N YP E+E L+HP + + V+G+
Sbjct: 356 ADGWLHTGDLGELDAGGRLRINGRKKDMFIVGGFNAYPAEIEGFFLEHPDVDQVAVIGVP 415
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ RL ++ A V + +++E L RE+ + GFKAPR FV
Sbjct: 416 DERLGQVGKAFVVPKRP------------------VAAEDLIAWGRER-MAGFKAPR-FV 455
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ PL +TGK+ +D++R
Sbjct: 456 EFLDALPLNATGKVMKDQLR 475
>gi|423460128|ref|ZP_17436925.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
gi|401141696|gb|EJQ49249.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
Length = 496
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E + + + VG +L RG +VM YW++ A +
Sbjct: 319 ------------IGKPVLFCEYVLIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLAKVDEDGFVYIVGRKKDMIISGGENIYPLEVEQVINKISEVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E KN L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGEIPIAFIVKNSSSELTEKEVIEHCR-LFLAKYKLP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ V + P +TGKI++ ++ ++ S
Sbjct: 468 KEIVFLEE-LPKNATGKIQKAQLANQLKS 495
>gi|154150313|ref|YP_001403931.1| AMP-dependent synthetase/ligase [Methanoregula boonei 6A8]
gi|153998865|gb|ABS55288.1| AMP-dependent synthetase and ligase [Methanoregula boonei 6A8]
Length = 566
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 46/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+++ L+ +E+ T++ VP + +A L + S++ + G P E+
Sbjct: 276 PTFDAEEVLKTIEKERCTAVHGVPTMF--IAELSHPNFSKYNLSSLRTGIMAGSPCPIEV 333
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK+ ++ YG TETS +T T DP + +
Sbjct: 334 MKQVNTKMNMRDIVIVYGQTETSPGVTMTTTKDPL--------------------ERRVT 373
Query: 134 CVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PH ELK+ + VG I RG VM Y++ A + + W T
Sbjct: 374 TIGRAFPHTELKIIDPKTGKIVPMGEVGEICARGYCVMKCYYNNPAATHATLDKDHWNHT 433
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ ++D+ G +VGR + GGEN+YP E+E L H + + VVG+ + + E
Sbjct: 434 GDLATMDEEGYFKVVGRLKDMVIRGGENIYPREIEEFLHHHEKVSDVYVVGVPDIKYGEE 493
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A V+++ +E +++ C+ K + FK PR +VL+ FP
Sbjct: 494 LCAWVKVKAGQALTEDE----------------VKEFCKGK-IAHFKIPR-YVLFVDDFP 535
Query: 308 LTSTGKIRRDEVRREVMSHL 327
++ TGKI++ +R E + L
Sbjct: 536 MSVTGKIQKFVMREESIKRL 555
>gi|423403479|ref|ZP_17380652.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|423475873|ref|ZP_17452588.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
gi|401648576|gb|EJS66171.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|402434705|gb|EJV66742.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
Length = 496
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIIPRKFEPTTALSMIEKHKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS P F
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETS-------------------PTVFMLS 308
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
++ H+ + GKP E + + + VG +L RG +VM YW++ A +
Sbjct: 309 EEDARHKVGSI--GKPVLFCEYVLIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V+++GR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLAKVDEDGFVYIIGRKKDMIISGGENIYPLEVEQVINKISEVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG + + E+ +A + + S + +E KE++ +HCR L +K P
Sbjct: 425 VGRQHVKWGEIPIAFIVKKSSSELTE---------KEVI-------EHCR-LFLAKYKLP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ V + P +TGKI++ ++ ++ S
Sbjct: 468 KEIVFLEE-LPKNATGKIQKAQLANQLKS 495
>gi|311032883|ref|ZP_07710973.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. m3-13]
Length = 546
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 147/333 (44%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V + F+ L+AVEQ T+L VP + +A L S++
Sbjct: 251 LAAVAKGATMVPLVMFDPLLVLKAVEQEKCTALYGVPTMF--IAELNHPDFEKYDLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+MK + ++ AYG TE S +T YD + A
Sbjct: 309 TGIMAGSPCPTEIMKRVVHDMGAKEITIAYGQTEASPVITQTRPYDSIERRVSTVGSALD 368
Query: 121 NVTPNSV------HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
NV + H P GV G + TRG VM Y++
Sbjct: 369 NVDVKIIDPATGEHVPNGV--------------------QGELCTRGYLVMKGYYNMKDQ 408
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
E WL TGD+ ++DD G V + GR I GGEN+YP E+E L HP I +
Sbjct: 409 TKDAIDSEGWLHTGDLATMDDDGYVVITGRLKDMIIRGGENIYPREIEEFLYSHPKIFDV 468
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VG+ + + E V A ++++ ES L+S+ ++ +C K ++ +K
Sbjct: 469 QIVGVPDEKFGEQVAAFIKVKP----GES------------LNSQEVKDYCTGK-ISKYK 511
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
P +V +P+T++GKI++ ++R ++ L
Sbjct: 512 IP-YYVEIVDEYPMTASGKIQKFKLREHAVNTL 543
>gi|192289994|ref|YP_001990599.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
gi|192283743|gb|ACF00124.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 519
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
++G HV IP+F L A+ QH VT VP ++ + L + S+K I
Sbjct: 223 IMGGRHVVIPRFSPNDVLAAISQHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G +P +++ FP + +YGMTE S T ++ D LP A N
Sbjct: 281 GASPMPEAVLQACLRRFPSIRFGQSYGMTELSPVATILSPAD-------HLPSAPQNRLR 333
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVS 179
++ G+P E+++ VG ++ RG VM+ YW Q V
Sbjct: 334 SA---------GRPIVSAEVRIVDAEDRELKPGEVGEVVVRGPMVMMGYWKQPELTAHVL 384
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W+ TGD G D G +++ R I +GGENVY EVE + HP ++ V+GI
Sbjct: 385 RGG-WMHTGDSGRFDADGYLYISDRIKDMIITGGENVYSIEVEHAIAAHPDVLQCAVIGI 443
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+A+ E V A V R L+++ L CR + +K+PR
Sbjct: 444 PHAKWGEAVHAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSI 486
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
P PL+S KI + +R
Sbjct: 487 EFRDDPLPLSSVNKINKAALR 507
>gi|441505167|ref|ZP_20987157.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441427268|gb|ELR64740.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 571
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 49/330 (14%)
Query: 6 VGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
VGAC + IP F+ K+ L+A++ T++ VP + +A L S++ +
Sbjct: 277 VGAC-IVIPAEHFDPKAVLKAIDSEKCTAVHGVPTMF--IAELEHPDFADYDMSSLRTGI 333
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G PS LM +++ YG TE +S LT +T D +LE +
Sbjct: 334 MAGAPCPSPLMMRVMKDMHCREILIGYGETE-ASPLTHLTSRDDSLERRTE--------- 383
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPS 177
VGK PH E+K+ + VG + RG H+M Y+ L
Sbjct: 384 ----------TVGKNLPHQEVKIVDLKTGATVPLGVVGEVCFRGYHIMQEYYGNELGTRD 433
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
WL +GD+G++D G V + GR I GGEN+YP E+E L HP I + V
Sbjct: 434 AIDEYGWLHSGDLGTMDADGYVKITGRIKEMIIRGGENIYPREIEEFLFAHPKIQQVAVF 493
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + E V A ++L ++S LR +C + LT FK P
Sbjct: 494 GVPDEYYGEQVAAWIQLHSGEAMTDSE----------------LRAYC-QGQLTHFKIPA 536
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
++ + FP+T TGK+++ +R + + L
Sbjct: 537 -YIRFVDSFPMTVTGKLQKFRMREQEVEKL 565
>gi|357021951|ref|ZP_09084182.1| acyl-CoA synthetase [Mycobacterium thermoresistibile ATCC 19527]
gi|356479699|gb|EHI12836.1| acyl-CoA synthetase [Mycobacterium thermoresistibile ATCC 19527]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 137/322 (42%), Gaps = 47/322 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +GA V +PK + + L A+E+H VT P + L R S++K
Sbjct: 237 IYLGATSVVLPKPDPVAILTAIERHGVTKFFAPPTVWISLLRSPRFSDF--DLTSLRKGY 294
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P E++ E P+ +L + YG TE S T +
Sbjct: 295 YGASSMPIEVLNEIRTRLPELRLWNLYGQTEMSPVATILG-------------------- 334
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
P G G PA +VE V + S V G I+ R H+ L YW L K
Sbjct: 335 PEEQESKAG-SAGYPALNVETAVVDEAGSSVPPGTVGEIVHRSPHLTLGYWRDDL-KTVE 392
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ + W +GD+G DD G + +V R+ IK+GGENV EVE V+ QHPG+ + V G
Sbjct: 393 AFRDGWFHSGDLGFFDDDGCLTVVDRKKDMIKTGGENVASREVEEVIYQHPGVAEVAVFG 452
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V R+ L E + HC + L GF+ P+
Sbjct: 453 VPHPKWIEAVCAAVVPRQG----------------ATLDEETVAAHCSGR-LAGFQTPK- 494
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
V + P +GKI + E+R
Sbjct: 495 HVFIVETLPKNPSGKILKRELR 516
>gi|67643093|ref|ZP_00441842.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
gi|124383885|ref|YP_001027564.1| AMP-binding protein [Burkholderia mallei NCTC 10229]
gi|254175161|ref|ZP_04881822.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|254201539|ref|ZP_04907903.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|254206875|ref|ZP_04913226.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|254357430|ref|ZP_04973704.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|124291905|gb|ABN01174.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10229]
gi|147747433|gb|EDK54509.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|147752417|gb|EDK59483.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|148026494|gb|EDK84579.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|160696206|gb|EDP86176.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|238524342|gb|EEP87775.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
Length = 570
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 271 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 328
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 329 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 369
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 370 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 427
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 428 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 487
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 488 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 530
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 531 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 562
>gi|87199233|ref|YP_496490.1| long-chain-fatty-acid--CoA ligase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134914|gb|ABD25656.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 47/329 (14%)
Query: 1 MAMLMVGAC--HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+ ++ +GA + + +FE ++ +AVEQ VT VPA + L R
Sbjct: 227 LGVMAIGAGLPGIVLAEFEPRAVFDAVEQKGVTRFFIVPAALQMLLNHPDCASVDFSR-- 284
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
VK I+ G +P L++E F A+ I AYGMTET+ ++ LP
Sbjct: 285 VKYIIYGASPIPLVLLRECIAMF-SAEFIQAYGMTETTGTICM-------------LPPE 330
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFL 173
+V N + GKP P VE++V + G + +G I TR ++ ML YW+
Sbjct: 331 DHDVNGNQRMR----SAGKPLPGVEVRVIDENGRSLGPNEIGEIQTRSSNNMLGYWNLPE 386
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A T + W+ TGD G +D+ G V++ R I SGGENVYP +VE+ + HP +
Sbjct: 387 ATAKTMTPDGWISTGDAGYLDEDGYVYMHDRIKDMIISGGENVYPAQVESAIYGHPDVQE 446
Query: 234 IVVVGIANARLTEMVVA-CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E V A CV + + + RE+ L G
Sbjct: 447 VAVIGVPDEKWGEAVKAVCV-----------------PKPGHTIDPQSIIDWTRER-LAG 488
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
FK P+ V P +GKI R +R
Sbjct: 489 FKVPKS-VDVIDALPRNPSGKILRRTLRE 516
>gi|399022746|ref|ZP_10724815.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
gi|398084166|gb|EJL74862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
Length = 539
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 58/333 (17%)
Query: 7 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKK 61
GAC + IP F+ L+ V TSL VP + +A+LA K ++ D S++
Sbjct: 247 GAC-IVIPNDSFDPDITLKVVSDEKCTSLYGVPTMFIAELAV-----KDFETYDFSSLRT 300
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ G P E+MK+ N ++ YGMTETS T TL +LE
Sbjct: 301 GVMAGSVCPPEIMKKVENLMNIKEMSICYGMTETSPVST-QTLIGTSLE----------- 348
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 176
Q VG H+E+K+ ++ V G + TRG VML+YW+
Sbjct: 349 --------KQVSTVGTVQDHLEIKIINENGKVVNRGEHGELCTRGYSVMLKYWNDPENTG 400
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V W+ TGD+ +DD G + + GR I GGEN+ P+E+E L + I+ + +
Sbjct: 401 KVLDDARWMHTGDLAVMDDEGYITISGRIKDLIIRGGENISPKEIEDFLYTYRNILDVQI 460
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + + E V+A V++R+ ++ +E+ ELL +C+ + + +K P
Sbjct: 461 IGVPSEKFGEEVMAWVKIRKGFEITEN---------ELL-------DYCKGR-IAHYKVP 503
Query: 297 RLFVLWR--KPFPLTSTGKIRRDEVRREVMSHL 327
+ W+ FP+T +GKIR+ E+R M L
Sbjct: 504 K---YWKFVDEFPMTISGKIRKVEMREISMKEL 533
>gi|229155539|ref|ZP_04283647.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
gi|228627857|gb|EEK84576.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
Length = 496
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE +AL +E+H VT ++ VP I L + SV+
Sbjct: 213 LFAGGVIIVPRKFEPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETA--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E N + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP + + + + VG +L RG +VM YW++ A K
Sbjct: 319 ------------IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLYTGDLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG R+ +W E+ K +L+ + + +HCR L +K P
Sbjct: 425 VG----------------RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IIFLKELPKNATGKIQKAQLANQLKS 495
>gi|167721819|ref|ZP_02405055.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|209696106|ref|YP_002264036.1| AMP-binding enzyme, long chain fatty acid Co-A ligase, acetyl-CoA
synthetase [Aliivibrio salmonicida LFI1238]
gi|208010059|emb|CAQ80383.1| AMP-binding enzyme, putative long chain fatty acid Co-A ligase,
acetyl-CoA synthetase [Aliivibrio salmonicida LFI1238]
Length = 514
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 148/324 (45%), Gaps = 56/324 (17%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD---SVK 60
++ G+ V I +F K+ L+ + +H VT L VP + L K ++ ++K
Sbjct: 231 ILAGSALVLISRFVPKTVLQQIHEHKVTHLAGVPTMFIGLLAYAEKNKGDYLKEIAQTLK 290
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++GG +P E++K+ + +I YG++E+S F L PG
Sbjct: 291 VAISGGASMPIEVLKQFEEKL-QVPVIEGYGLSESSPVAAFNHL--EFQRKPG------- 340
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
+G+P P + +KV + G ++ RG +VM Y+ K
Sbjct: 341 -------------SIGQPLPGITMKVIDKNGHELPVGQEGELVIRGHNVMKGYYK----K 383
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + WL TGDI DD G +++V R I SGG NVYP EVE V ++HP +
Sbjct: 384 PQETAKTIIDGWLHTGDIVRFDDEGYIYVVDRLKELIISGGYNVYPREVEEVYMKHPSVH 443
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+GI + R E V A V L+E SE KEL+ S +QH L
Sbjct: 444 LVAVIGIEHPRFGEEVKAFVILKEGHSISE---------KELIKWS---KQH-----LAD 486
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRR 316
+K P+ + + P+T+TGKI +
Sbjct: 487 YKCPKHLDIV-EALPMTATGKILK 509
>gi|444517741|gb|ELV11759.1| Acyl-CoA synthetase family member 2, mitochondrial [Tupaia
chinensis]
Length = 620
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 157/337 (46%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M +M GA + P F+ K ALEAV + + L P + D+ + + D +
Sbjct: 325 MVCVMHGATLILSSPIFDGKKALEAVSKERGSFLYGTPTMFVDILN----QPDFSSYD-I 379
Query: 60 KKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ G G P EL++ N L+ AYG TE +S +TFM+ + T+E +
Sbjct: 380 STMCGGVIAGSPAPPELIRAIINKLNMRDLVVAYGTTE-NSPVTFMSFPEDTVEQKAE-- 436
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS--DGS----SHVGRILTRGAHVMLRYWD 170
VG+ PH E K+ + DG + G + RG VML YW
Sbjct: 437 -----------------SVGRIMPHTEAKIVNVEDGKLLELNTPGELCIRGYCVMLGYWG 479
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ + W TGDI ++D+ G +VGR I GGEN+YP E+E HP
Sbjct: 480 EPEKTQEAVGQDKWYWTGDIATMDEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPQ 539
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + R+ E + AC+RL+ + ++E ++ C+ K +
Sbjct: 540 VQEVQVVGVKDDRMGEEICACIRLKSGEE----------------TTAEEIKAFCKGK-I 582
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ FK PR +V++ +PLT +GK+++ ++R ++ HL
Sbjct: 583 SHFKIPR-YVVFVTNYPLTISGKVQKFKLREQMERHL 618
>gi|404445193|ref|ZP_11010337.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403652587|gb|EJZ07618.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 518
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 150/325 (46%), Gaps = 43/325 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
A L GA V + + + L+A+ +H VT+++ VPA++ L ++ +++
Sbjct: 220 FAGLWQGATTVVLRDVDPGAILDALARHRVTNMLLVPAVIQFLLDADGIEHV--DLSALR 277
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ G + +++ + F YGMTET+ S+T L+ P LP+
Sbjct: 278 VIVYGASPISDDVLIRGIDRF-GGVFAQVYGMTETTGSIT-------QLDGPDHLPELLR 329
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAK 175
+ C GKP P V+L+V D + VG + TR ML YW+ A
Sbjct: 330 S------------C-GKPYPWVQLRVVGDDGADAAPGTVGEVWTRSPQNMLGYWNNPDAS 376
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ T + WL TGD G +D G ++L R I SGGENVYP EVE VL+ HP + +
Sbjct: 377 AATLTADGWLRTGDAGFVDADGYLYLHDRIKDMIVSGGENVYPAEVENVLMTHPAVADVA 436
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ + R E V A V R + + + EL+ R++ L GFK
Sbjct: 437 VIGVPDRRWGEAVKAIVVARVVARGA------APTEAELI-------AFARDR-LAGFKL 482
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
P+ V + P +GK+ + +R
Sbjct: 483 PK-SVDFVDALPRNPSGKLLKRALR 506
>gi|170694322|ref|ZP_02885476.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170140745|gb|EDT08919.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L AV + T+L VP + +A L +
Sbjct: 277 LACVSVGANMVFPGEAFDPAATLAAVTEEQCTALHGVPTMF--IAELDHPDFASYDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK+ + +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+K+ + V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ S+ G W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 435 TRESIVDG--WMHTGDLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ +A+ E V A V LR Q ++E ++Q C + + +
Sbjct: 493 VQVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATAEEIQQFCHGQ-IAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P+ ++ + P+T TGK+++ +R+ ++ LK
Sbjct: 536 KVPK-YIRFVDELPMTVTGKVQKFVMRQRMIDELK 569
>gi|53721001|ref|YP_109987.1| AMP-binding domain-containing protein [Burkholderia pseudomallei
K96243]
gi|126453323|ref|YP_001068259.1| AMP-binding protein [Burkholderia pseudomallei 1106a]
gi|167847888|ref|ZP_02473396.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167896446|ref|ZP_02483848.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167904847|ref|ZP_02492052.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167913125|ref|ZP_02500216.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|242318046|ref|ZP_04817062.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|386863694|ref|YP_006276643.1| AMP-binding protein [Burkholderia pseudomallei 1026b]
gi|418394740|ref|ZP_12968837.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|418537313|ref|ZP_13102953.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|418554847|ref|ZP_13119609.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|52211415|emb|CAH37406.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
pseudomallei K96243]
gi|126226965|gb|ABN90505.1| AMP-binding domain protein [Burkholderia pseudomallei 1106a]
gi|242141285|gb|EES27687.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|385350022|gb|EIF56574.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|385369739|gb|EIF75049.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|385374682|gb|EIF79520.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|385660822|gb|AFI68245.1| AMP-binding domain protein [Burkholderia pseudomallei 1026b]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|86747706|ref|YP_484202.1| AMP-binding protein [Rhodopseudomonas palustris HaA2]
gi|86570734|gb|ABD05291.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 576
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ + L+ T+L VP + +A L S+
Sbjct: 276 LASVTCGAAMVYPGEGFDPLATLQTASSEKCTALYGVPTMF--IAELDHPDFASFDLSSL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + ++ AYGMTETS ++F + D E
Sbjct: 334 RTGIMAGAPCPVEVMRRVNDQMNMREVTIAYGMTETSP-VSFQSAVDDPEER-------- 384
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ PHVE+KV V G + TRG +ML YWD+
Sbjct: 385 -----------RVSTVGRIHPHVEVKVVDLEGRIVPRGVRGELCTRGYSIMLGYWDEAEK 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 434 TADVLDAAGWMHTGDLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+ G+A++R E + A VR+R L+++ +R C + + K
Sbjct: 494 QIFGVADSRYGEELCAWVRVRPGET----------------LTADDIRGFC-QGQIAHNK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + FP+T TGKI++ +R +V + L
Sbjct: 537 IPR-YVEFVDEFPMTVTGKIQKFVMREKVEAKL 568
>gi|443693463|gb|ELT94820.1| hypothetical protein CAPTEDRAFT_20304 [Capitella teleta]
Length = 533
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 146/328 (44%), Gaps = 47/328 (14%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A L+ G V +P+FE LE ++++ V SL+ VP I+ LA V + SVKK
Sbjct: 242 ATLLQGNRLVTLPRFEPTLFLETIQKYKVNSLLLVPPIVLFLAKHPMVSEY--DLSSVKK 299
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
G LP E+M++ + AYGMTET+ T +P
Sbjct: 300 AGCGAAPLPEEVMQQFVKRLKVPQSKQAYGMTETTLVST--------------MPPQTSP 345
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAK 175
V P S G P P+VE++V G+ G + RG +VM Y +Q A
Sbjct: 346 VRPGSS--------GPPVPNVEIQVVDPETGAVLGTHQRGELWIRGPNVMKGYLNQPEAT 397
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
S E WL TGDIG DD ++V R IK G V P E+EA+L +HP I
Sbjct: 398 HSTKDDEGWLHTGDIGYYDDDSYFYIVDRMKELIKFKGFQVAPAELEALLQEHPKIADAA 457
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ +A E+ A V L+ C+ S + + ++ ++ R FK
Sbjct: 458 VIGVPDAEAGELPKAYVVLK-------PKCEMSVDDVKNFVAGKMAR----------FKQ 500
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREV 323
R V + P + +GKI R E+R ++
Sbjct: 501 LRGGVDFVASVPKSPSGKILRKELRAQL 528
>gi|402555350|ref|YP_006596621.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus FRI-35]
gi|401796560|gb|AFQ10419.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus FRI-35]
Length = 561
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|134281418|ref|ZP_01768126.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
gi|134247085|gb|EBA47171.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
Length = 576
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|76811858|ref|YP_331592.1| AMP-binding protein [Burkholderia pseudomallei 1710b]
gi|167818006|ref|ZP_02449686.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|254258460|ref|ZP_04949514.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|418542357|ref|ZP_13107796.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|418548842|ref|ZP_13113940.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
gi|76581311|gb|ABA50786.1| AMP-binding enzyme domain protein [Burkholderia pseudomallei 1710b]
gi|254217149|gb|EET06533.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|385355749|gb|EIF61910.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|385357060|gb|EIF63139.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
Length = 576
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGARMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDEL 568
>gi|39934486|ref|NP_946762.1| fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
gi|39648335|emb|CAE26855.1| putative fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
Length = 519
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 41/321 (12%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
++G HV IP+F K L A+ H VT VP ++ + L + S+K I
Sbjct: 223 IMGGRHVVIPRFAPKDVLAAISHHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G +P +++E FP + +YGMTE S T ++ D LP A P
Sbjct: 281 GASPMPEAVLQECLRRFPSIRFGQSYGMTELSPVATILSPDD-------HLPSA-----P 328
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ + G+P E+++ VG ++ RG VM+ YW Q V
Sbjct: 329 R--HRLR--SAGRPVVSAEVRIVDAEDRQLKPGEVGEVVVRGPMVMMGYWKQPELTAHVL 384
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W+ TGD G D G +++ R I +GGENVY EVE + HP ++ V+G+
Sbjct: 385 RGG-WMHTGDSGRFDTEGYLYISDRIKDMIITGGENVYSIEVENAIAAHPDVLQCAVIGV 443
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+A+ E V A V R L+++ L CR + +K+PR
Sbjct: 444 PHAKWGEAVHAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSI 486
Query: 300 VLWRKPFPLTSTGKIRRDEVR 320
P PL+S KI + +R
Sbjct: 487 EFRDDPLPLSSVNKINKAALR 507
>gi|328718820|ref|XP_003246586.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
isoform 2 [Acyrthosiphon pisum]
Length = 596
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 144/333 (43%), Gaps = 44/333 (13%)
Query: 5 MVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 62
+V V++P F+ K+ ++ + + T + P + D + + +K
Sbjct: 300 LVTKSTVYLPSAHFDPKATVDVLTEEKCTFIFGTPTVHVDTMSAFEKLPPELQHNDLKIA 359
Query: 63 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
+ GG LM + N FP+AK++S +GMTETS P +F N
Sbjct: 360 ITGGAPCSPILMSKFKNMFPRAKILSLFGMTETS-------------------PCSFQNF 400
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 177
T +S + + +G HVE KV V G +L RG M Y++
Sbjct: 401 TDDSDERIKST-MGFIQDHVEAKVIDTNGDMVPFGTPGELLIRGYLNMNGYFNDEEKTKE 459
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
WL TGD + + G VGR I GGEN++P+E+E L HP I + V
Sbjct: 460 TIDSNGWLHTGDQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVY 519
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + R+ E V A V ++E +E++ SK K ++ FK P+
Sbjct: 520 GIPDHRMGEEVCASVIVKEGATITEADIKAYSKGK-----------------ISHFKIPK 562
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 330
+ + FP+T+TGK++++ + M + SL
Sbjct: 563 YIFIEKDGFPMTATGKVQKNRLSEIAMQRISSL 595
>gi|334345488|ref|YP_004554040.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102110|gb|AEG49534.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 555
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 48/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L GA V+ + ++ L+A+E T+L VP + +A L R ++
Sbjct: 250 LAALTSGAAMVYPGEAYDPTLVLQAIEAEGCTALYGVPTMF--IAILARTDLDSYNVSTL 307
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P+ M++ + ++ YGMTETS T DP E G
Sbjct: 308 RTGIMAGAPCPATTMRQVMDQLNMREITIGYGMTETSPLTTQTATDDPLEERAG------ 361
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLA 174
VG+ PH E K+ DG + G +RG VM YWD+
Sbjct: 362 --------------TVGRVHPHAEAKIVGPDGKTLPIGEQGEYCSRGYAVMQGYWDEPER 407
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ W+ +GD+ +D+ G + + GR + GGEN+YP E+E LL HP I
Sbjct: 408 TAEAIDADGWMHSGDLAVMDEKGYIRITGRIKDMVIRGGENIYPREIEEFLLTHPQIQDA 467
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+A+ +L E V A W ++ + LS + + HCR N+ +K
Sbjct: 468 QVFGVADEKLGEEVCA-------WVIAKPGAE---------LSVDGVLAHCR-GNIAHYK 510
Query: 295 APR-LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR + V+ R FP+T TGK ++ ++R+ + + L+
Sbjct: 511 VPRHVRVVPR--FPMTVTGKAQKFQMRKMMETELR 543
>gi|134076081|emb|CAK39440.1| unnamed protein product [Aspergillus niger]
Length = 546
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 155/344 (45%), Gaps = 52/344 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 58
MA GA F F +++AL V++ T+L VP + + +L L + +G
Sbjct: 233 MATATHGAAIAFPTEAFNARAALRTVQEEKCTALYGVPTMFLEELNLLDEGEIPNEGFQY 292
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK +L YGMTETS T DP
Sbjct: 293 LRTGIAAGSSIPAELMKRLHKVLNLTELTICYGMTETSPVSAMTTTDDPI---------- 342
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHVGRILTRGAH------VMLRYWDQ 171
+ VG+ PHVE KV S D +++ I TRG +M YW+
Sbjct: 343 ----------DKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWND 392
Query: 172 FLAKPSV----STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
+ V G+VW+ TGD S+ G + + GR I GGEN++P E+E LL
Sbjct: 393 PVKTAEVMIADDDGKVWMHTGDEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLT 452
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
+PG+I VG+ + R E V + RE ES K +RQ RE
Sbjct: 453 YPGVIDASAVGVPDERYGEAVAVFIIHRE----PESEAADEDK----------IRQWVRE 498
Query: 288 KNLTGFKAPRLFVLWRKP---FPLTSTGKIRRDEVRREVMSHLK 328
K L+ P+ +V + +P FP T++GK+++ ++R + ++ LK
Sbjct: 499 K-LSNHLVPK-YVFFLQPTESFPKTASGKVQKFKLREDALTILK 540
>gi|316931557|ref|YP_004106539.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315599271|gb|ADU41806.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 564
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 155/336 (46%), Gaps = 52/336 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA V+ + F+ L+ + T+L VP + +A L + S+
Sbjct: 264 LASVTCGAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFAGFDLSSL 321
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ ++ ++ AYGMTETS P +F
Sbjct: 322 RTGIMAGAPCPVEVMRRVNDAMNMREVTIAYGMTETS-------------------PVSF 362
Query: 120 GNVTPNSVHQPQG---VCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQ 171
++V P+ VG+ PHVE+KV DG G + TRG VML YWD+
Sbjct: 363 ----QSAVDDPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGTRGELCTRGYSVMLGYWDE 418
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I
Sbjct: 419 PEKTADVLDAAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 478
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ + G+A+ R E + A VR R ES L+++ +R C + +
Sbjct: 479 QDVQIFGVADDRYGEELCAWVRPRP----GES------------LTADDVRAFC-QGQIA 521
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K PR ++ + FP+T TGKI++ +R +V + L
Sbjct: 522 HNKIPR-YIEFVDEFPMTVTGKIQKFIMREKVEAKL 556
>gi|206977731|ref|ZP_03238622.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus H3081.97]
gi|217962009|ref|YP_002340579.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH187]
gi|423355009|ref|ZP_17332634.1| hypothetical protein IAU_03083 [Bacillus cereus IS075]
gi|423570756|ref|ZP_17547001.1| hypothetical protein II7_03977 [Bacillus cereus MSX-A12]
gi|206744032|gb|EDZ55448.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus H3081.97]
gi|217062994|gb|ACJ77244.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH187]
gi|401085588|gb|EJP93827.1| hypothetical protein IAU_03083 [Bacillus cereus IS075]
gi|401203383|gb|EJR10222.1| hypothetical protein II7_03977 [Bacillus cereus MSX-A12]
Length = 561
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|410697496|gb|AFV76564.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 565
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 145/325 (44%), Gaps = 55/325 (16%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILN 64
G + +P+ E + L+ +E H VT VP + L + RD S+K ++
Sbjct: 283 GGKLILVPRPEPRELLDLIEDHKVTLFPGVPTLYVGLMQ----APNFGHRDLTSLKFCIS 338
Query: 65 GGGGLPSELMK--EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
G LP E+ + EA A L+ YG+TE S + L FG
Sbjct: 339 GAAPLPVEVARRFEAETG---ALLVEGYGLTEASPVVHSNPL--------------FGQR 381
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 177
SV G P P VE KV + V G ++ RG +VM YW++
Sbjct: 382 KVGSV--------GLPLPGVEAKVVDERGQEVPVGEVGELIVRGPNVMKGYWNRPTETSE 433
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
G WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL HP ++ VV
Sbjct: 434 ALKGG-WLFTGDMARMDEEGYFYIVDRKKDLIIAGGYNIYPREVEEVLYAHPAVMEAAVV 492
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + E V A V L+ ++ + ++ L +HCR +NL +K PR
Sbjct: 493 GVPDPYRGETVKAFVVLKPEYRGT--------------VTERELEEHCR-RNLAAYKVPR 537
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRRE 322
L+ +R+ P + GK+ R +R E
Sbjct: 538 LWE-FREELPKSLVGKVLRRVLREE 561
>gi|229090943|ref|ZP_04222167.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
gi|228692344|gb|EEL46079.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
Length = 496
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 53/329 (16%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L G + KFE AL +E+H VT ++ VP I L + + T SV+
Sbjct: 213 LFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFY 270
Query: 64 NGGGGLPSELMKEATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 122
NGG P ELM+E + + L +GMTETS ++ ++ D +
Sbjct: 271 NGGAPCPEELMREFID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------- 318
Query: 123 TPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KP 176
+GKP E ++ + + VG +L RG +VM YW++ A +
Sbjct: 319 ------------IGKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEE 366
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ G WL TGD+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V
Sbjct: 367 TIQDG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAV 424
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG + + E+ +A + K+ +L+ +V+ +HCR L +K P
Sbjct: 425 VGRQHVKWGEIPIAFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIP 467
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+ +++ K P +TGKI++ ++ ++ S
Sbjct: 468 KE-IVFLKELPKNATGKIQKAQLTNQLKS 495
>gi|398878775|ref|ZP_10633883.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
gi|398198250|gb|EJM85209.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
Length = 565
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V + T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLTTVAEEKATALYGVPTMF--IAMLDQPQRAQFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMNEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|424855471|ref|ZP_18279772.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663223|gb|EHI43349.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 502
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 57/327 (17%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+A L G + KF++ L +EQ VT++ VP+++ TL+ + G D S
Sbjct: 214 VATLHKGGTVILDSKFDAGRCLRQIEQFAVTTMFAVPSML----TLMAQDPGFAGADTAS 269
Query: 59 VKKILNGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
++ IL GG +P EL+ A+ P ++++YG+TE S++F D L++
Sbjct: 270 LRWILGGGAPMPPELVASWASRGVP---VLASYGLTEAGPSVSFRRSSDAALKS------ 320
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQF 172
G PA +L++ SD S VG +L RG H+ YW
Sbjct: 321 ---------------ASSGTPALLTDLRIVSDDGSDLPPGQVGEVLVRGPHIASGYWGNE 365
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A + + + WL +GD G ID G++ + GR I +GGENV P E+E +++Q+PGI
Sbjct: 366 TAT-AETFRQGWLASGDRGFIDVDGDLCITGRSKEIIITGGENVDPAEIEHLVVQYPGIR 424
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
VVG + E++ A V CD + + +EL Q L
Sbjct: 425 DAAVVGRPDPVWGEIITAVV-----------VCDDTVELEEL--------QQFLRPQLAK 465
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEV 319
FK PR+ R+ P + GK+ R E+
Sbjct: 466 FKIPRILE-RRESLPRSPVGKLLRREL 491
>gi|298247014|ref|ZP_06970819.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297549673|gb|EFH83539.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 517
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA + +P F+ + L VE+ T+L VP ++ L + RV + +SVK+I+ G
Sbjct: 224 GAANAILPGFQPEEYLATVERLRATTLNLVPTMIVMLLSHARVVQ--YSLNSVKRIIYGA 281
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
+P E+++ + K I YG TE LT + D + P
Sbjct: 282 SPMPREVLRRGLELW-GPKFIQYYGQTEAPLILTLLEAQDHLGDDP-------------- 326
Query: 127 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ-FLAKPSVST 180
+ Q + G+P P V L++ + V G I M+ YW L ++
Sbjct: 327 LRQERLFSCGRPVPGVALRIVDEDGQEVPQGTIGEITVSTNQAMVGYWKSPELTNATLRN 386
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
G W+ T D+G ID+ G V+LV R+ I SGG N+YP EVE VL QHP + V+GI
Sbjct: 387 G--WVHTRDMGYIDEQGYVFLVDRKADMIISGGFNIYPREVEEVLYQHPAVQEAAVIGIP 444
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V + + SE E L C+E+ L +K PR +
Sbjct: 445 DEIWGESVKAFVVCKPDYPSSE----------------EELIDFCKER-LASYKKPRT-I 486
Query: 301 LWRKPFPLTSTGKIRRDEVR 320
+ + P +TGK+ R +R
Sbjct: 487 EFMETLPKNATGKVVRRVLR 506
>gi|229141256|ref|ZP_04269795.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST26]
gi|375286523|ref|YP_005106962.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus NC7401]
gi|228642297|gb|EEK98589.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST26]
gi|358355050|dbj|BAL20222.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus NC7401]
Length = 563
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 532 -FRDELPKTTVGKILRRVLIDEEKRK 556
>gi|433649233|ref|YP_007294235.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433299010|gb|AGB24830.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 497
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 39/327 (11%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ +F++ V VTS VP ++ + +++ + G +++
Sbjct: 199 LSNLYAGRKMVYLRQFDAHEWTRLVRDEGVTSATVVPTMLDRIVSVLEAEPV--GLPTLR 256
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ GG + L++ A P ++AYG+TETSS++ +T D +A
Sbjct: 257 NLAYGGSKVALPLIRRALGLLPDVGFVNAYGLTETSSTIAVLTPDDH---------RAAL 307
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
T +V + G VG+P P +E+++ D G G + RG V RY D
Sbjct: 308 AATDEAVARRLG-SVGQPVPSIEVQIRGDDGSVLGPGETGELFVRGEQVSGRYTDIG--- 363
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV + W T D+ +D+GG +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 364 -SVLDADGWFPTKDVAMLDEGGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPAVRDCA 422
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG + +++VA V D ++ + + LR+H R +L G +
Sbjct: 423 VVGPEDPEWGQIIVAVV----------VPADGATPDP------DELREHVR-AHLRGSRT 465
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
P V++R P +TGK+ R E+ E
Sbjct: 466 PDR-VVFRDELPTNATGKVLRRELVDE 491
>gi|395776250|ref|ZP_10456765.1| AMP-binding domain protein [Streptomyces acidiscabies 84-104]
Length = 496
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 149/323 (46%), Gaps = 50/323 (15%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P FE + L AV++ TSL VP + +A L +++ +
Sbjct: 210 GACIVVPAPSFEPAATLHAVQRERCTSLYGVPTMF--IAELNLPDFAAYDLTTLRTGIMA 267
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 268 GSPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLEH-------------- 312
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ-FLAKPSV 178
+ VG+ PHVE+K+ + G + TRG VML YW++ S+
Sbjct: 313 -----RTATVGRVLPHVEVKIVDPATGVTQPRGRAGELCTRGYSVMLGYWNEPSRTAESI 367
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W+ TGD+G + + G V +VGR I GGEN+YP E+E L HP I + +VG
Sbjct: 368 DAGR-WMHTGDLGVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQIVG 426
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 297
+ + E V+ACV ++ D + ++ +R +C + L +K P R
Sbjct: 427 VPHETYGEEVLACVIPHDAG-------DPPTLDE--------IRGYCAGR-LAHYKIPSR 470
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
+ +L FP+T +GK+R+ E+R
Sbjct: 471 VRIL--DAFPMTVSGKVRKIELR 491
>gi|374365200|ref|ZP_09623293.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373103335|gb|EHP44363.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 573
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 158/333 (47%), Gaps = 52/333 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GAC VF + FE + + AV + T+L VP + +A L + ++
Sbjct: 275 LACVSTGACMVFPGEAFEPAATMAAVSEERCTALHGVPTMF--IAQLDHPDFSKYDFSTL 332
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + A++ AYGMTETS P +F
Sbjct: 333 RTGIMAGSPCPIETMKRVIANMHMAEVTIAYGMTETS-------------------PVSF 373
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD-QF 172
+ T + + + + VG PH+E+K+ DG+ + G + TRG VM YWD +
Sbjct: 374 QSSTTDPLDK-RVTTVGLIQPHLEVKLV-DGTGEIVPVGEKGELCTRGYSVMQGYWDDEP 431
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
+ ++ G W+ TGD+ +ID+ G +VGR + GGENVYP E+E L +HP +
Sbjct: 432 RTREAIRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQ 489
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V G+ + + E V A + L+ +E + +R CR++ +
Sbjct: 490 AVQVFGVPDPKYGEEVCAWIVLKPGETATEDD----------------IRAFCRDQ-IAH 532
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
+K PR ++ + P+T TGK+++ V RE M+
Sbjct: 533 YKIPR-YIRFVDEMPMTITGKVQK-FVMRERMT 563
>gi|313679823|ref|YP_004057562.1| amp-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
gi|313152538|gb|ADR36389.1| AMP-dependent synthetase and ligase [Oceanithermus profundus DSM
14977]
Length = 546
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 47/315 (14%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
GA V +P++++K LE +++ T VP + + T + G S++ ++G
Sbjct: 270 GARLVLLPRWDTKLTLETIQRERPTLFPGVPTMYVAINTSPLTPRYRLG--SIRACISGS 327
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
LP E+ + AKL+ YG+TE+S P N P
Sbjct: 328 APLPVEV-AQTFEKITGAKLVEGYGLTESS-------------------PVTHAN--PIY 365
Query: 127 VHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
+ +G +G P P VE ++ DG VG ++ +G +VM YW++ + + +
Sbjct: 366 GRRKKG-AIGLPLPGVEARIVDPDGQPLPPGEVGELVVKGPNVMKGYWNR-PEETAQTLK 423
Query: 182 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
+ WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL QHP + VVG+ +
Sbjct: 424 DGWLFTGDVARMDEEGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVKEAAVVGVPD 483
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
A E V A V L+E ++ +S E L+Q +E+ L +K P+L+
Sbjct: 484 AYRGETVKAFVVLKEGYEGQ--------------VSEEELKQFAKER-LAAYKVPKLWE- 527
Query: 302 WRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 528 FRDDLPKTAVGKILR 542
>gi|42783699|ref|NP_980946.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 10987]
gi|42739628|gb|AAS43554.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 10987]
Length = 561
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|333924075|ref|YP_004497655.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749636|gb|AEF94743.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 554
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 144/335 (42%), Gaps = 50/335 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ GA V + F LE +EQ T++ VP + + L + K S++
Sbjct: 251 MTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELNKKKYDTSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N ++ YG TE S ++T DP
Sbjct: 309 TGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQF 172
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 --------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYKMP 406
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A WL TGD+G +D G + GR I GGEN+YP E+E L HP +
Sbjct: 407 EATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVK 466
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 467 DVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-IAK 509
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 510 YKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|442318693|ref|YP_007358714.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
gi|441486335|gb|AGC43030.1| AMP-binding protein [Myxococcus stipitatus DSM 14675]
Length = 594
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 144/318 (45%), Gaps = 46/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ + LEAV+ TSL VP + +A L + +++ + G P E+MK
Sbjct: 306 FDALAVLEAVQAERCTSLYGVPTMF--IAELEHPRFGEFNLSTLRTGVMAGSPCPVEVMK 363
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++ YGMTETS T L DP + V
Sbjct: 364 QVQSRMHMREVTICYGMTETSPVSTQSALDDPL--------------------DKRVSTV 403
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+KV + V G + TRG VML YW A W+ TGD
Sbjct: 404 GRVHPHLEVKVVEPETGAVVPRGSAGEMCTRGYSVMLGYWANPEATAKAVDAAGWMHTGD 463
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ ++D G V +VGR I GGEN+ P EVE L HPG+ V+G+ +A+ E V+
Sbjct: 464 LATMDADGYVRIVGRIKDLIIRGGENISPREVEEFLHTHPGVSEAQVIGVPSAKYGEEVM 523
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A V+ + + L+ E L +HC + T FK PR + L + FP+T
Sbjct: 524 AWVKPKPG----------------VTLTPEQLTRHCSGRIAT-FKIPRYWKL-VEAFPMT 565
Query: 310 STGKIRRDEVRREVMSHL 327
TGK+++ +R ++ L
Sbjct: 566 VTGKVQKFRMREVSVAEL 583
>gi|315224019|ref|ZP_07865860.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|420159021|ref|ZP_14665831.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314945990|gb|EFS97998.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|394762888|gb|EJF45063.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 542
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS P G +H V
Sbjct: 317 RVKEQMNMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----V 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATEQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + LS E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLSEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|71064885|ref|YP_263612.1| AMP-binding protein [Psychrobacter arcticus 273-4]
gi|71037870|gb|AAZ18178.1| putative long-chain fatty acid acyl-CoA ligase [Psychrobacter
arcticus 273-4]
Length = 584
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 155/336 (46%), Gaps = 52/336 (15%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A+L G C V+ P FE S L+AVE T L VP + +A L + +
Sbjct: 290 LAILTHGGCIVY-PNDGFEPLSVLQAVEAEKCTGLHGVPTMF--IAELDHPEFKNFDLST 346
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + ++ AYGMTETS + +T P
Sbjct: 347 LRTGIMAGSSCPIEVMRRVIDEMHMKEVTIAYGMTETSPV---------SCQTNEHTPL- 396
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQ 171
Q VG P +E+KV + + G +LTRG VM YW +
Sbjct: 397 ----------DKQVSTVGLVQPALEVKVVDAETGEIVPLGETGELLTRGYSVMKGYWGSR 446
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
F + ++ G W+ TGD+ ++D+ G V +VGR + GGEN+YP E+E L +HP I
Sbjct: 447 FKTREAIQDG--WMHTGDLATMDEDGYVKIVGRSKDMVIRGGENIYPVEIENYLYRHPKI 504
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ +VGI + R E++ A + +E+ L+ E +RQ C E ++
Sbjct: 505 RDVQIVGIPDKRYGEVLAAWIIPKEAGS----------------LTEEEVRQFCSE-HIA 547
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P + + +P+T TGKI++ ++ ++ L
Sbjct: 548 HYKVPTYYRFVTE-YPMTITGKIQKYKIIEQMKEEL 582
>gi|90411458|ref|ZP_01219469.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
gi|90327671|gb|EAS44014.1| putative long-chain-fatty-acid-CoA ligase [Photobacterium profundum
3TCK]
Length = 515
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 49/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A +++GA V +P+FE+ L+ +E+H V+ VP + L ++ S++
Sbjct: 230 AGILIGATLVMVPRFEAADVLQLIEKHNVSIFAGVPTMYIGLNHC----QSDSDVSSLRL 285
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++GG LP+E++ + F ++ YG++ETS F L +
Sbjct: 286 AISGGASLPTEVIHTFESKF-DVPILEGYGLSETSPIACFNHLDAERI------------ 332
Query: 122 VTPNSVHQP-QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
P SV QP QGV + ++L+ G ++ RG +VM Y L +P +
Sbjct: 333 --PGSVGQPVQGVEI----QLMDLQGNKAKQGDTGEVVIRGHNVMKGY----LNRPDATE 382
Query: 181 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
+ W TGDIG D+ GN+++V R I GG NVYP E+E V + HP + + V+
Sbjct: 383 ASIVNGWFYTGDIGKFDEEGNLFIVDRVKDLIIRGGFNVYPREIEEVFMTHPDVAMVAVI 442
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
GI + E + A V L+E ++ ++ L + + + FK PR
Sbjct: 443 GIPSEEYGEEIKAYVVLKEGS----------------VIEADALHEWGKVQ-FAAFKYPR 485
Query: 298 LFVLWRKPFPLTSTGKIRRDEVRREV 323
V R+ P+++TGKI + +++ E+
Sbjct: 486 S-VEIRQQLPMSATGKILKKDLKAEM 510
>gi|219851671|ref|YP_002466103.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
gi|219545930|gb|ACL16380.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
Length = 566
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 148/336 (44%), Gaps = 49/336 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
MA + GA V P F+S++ L AV+ T+L VP + K + G ++
Sbjct: 262 MASVTHGATMVIPSPAFDSEAVLRAVQDEHCTALHGVPTMFIAELAHPNFKNYYLG--TL 319
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MKE ++ YG TE S +T T D + QAF
Sbjct: 320 RTGIMAGSPCPIEKMKEVATLMNMRDIVIVYGQTELSPGVTMTTTKDSLERRVSTIGQAF 379
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-------VGRILTRGAHVMLRYWDQF 172
PH ELK+ D ++H +G I RG VM Y++
Sbjct: 380 --------------------PHTELKIV-DPNTHRIVSRGEIGEICARGYMVMKGYYNNP 418
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A + W+ TGD+GS+D G + + GR + GGENVYP E+E L HP I
Sbjct: 419 AATRAALDANGWVHTGDLGSMDREGFLKVEGRLKDMVIRGGENVYPREIEEYLHHHPKIS 478
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ V+G+ + + E ++A V + K L+ + +R+ C+ + +
Sbjct: 479 DVYVIGVPDKKYGEELMAWVSIM----------------KGETLTPDEIREFCKNR-IAR 521
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR + + FP++ TGKI++ E+R+ + L
Sbjct: 522 YKIPRYY-KFVDTFPMSVTGKIQKFEMRKIAIEELN 556
>gi|88603692|ref|YP_503870.1| AMP-dependent synthetase/ligase [Methanospirillum hungatei JF-1]
gi|88189154|gb|ABD42151.1| AMP-dependent synthetase and ligase [Methanospirillum hungatei
JF-1]
Length = 517
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 148/336 (44%), Gaps = 44/336 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+++L G +V + ++ + ++ +T L +P ++ L T SV+
Sbjct: 216 LSVLRAGGTYVIMERYNLDEYISLTREYQITILAGMPPVIHALTE--TPPGTEDNFTSVR 273
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+I++GGG + S K+ F K +I+AYG++ET + L T+ P P A
Sbjct: 274 RIISGGGPMHSPTWKKFNERF-KIPVINAYGLSET------IVLGCGTVIRPEDYPTA-- 324
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDG-------SSHVGRILTRGAHVMLRYWDQFL 173
+ VGKP + E+K+ G S H G I RG V L YW+Q
Sbjct: 325 ---------DEYNSVGKPVGYAEVKIVEVGNPAKELTSPHAGEIALRGPGVALGYWNQPE 375
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
V + W TGDIG IDD G + + R+ I G VYP EVE VL+ HP I
Sbjct: 376 ETKEVFMEDGWFLTGDIGYIDDHGMLVITDRKKDMIIMSGWKVYPTEVENVLINHPKISD 435
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
I + G + E+ A V LR NKE L+ E L RE+ L G+
Sbjct: 436 IAIFGCPDEEKGEIPAAAVVLR---------------NKEDTLTLEELSGWSREQ-LAGY 479
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 329
K PR V+ + P K+ R E+R + S +S
Sbjct: 480 KIPRRLVILNQ-LPRVGGWKLLRRELRESLCSEKRS 514
>gi|375138239|ref|YP_004998888.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359818860|gb|AEV71673.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 517
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 46/323 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L GA V + + + L+++ QH +T+L+ VPA++ + V SV+ I+
Sbjct: 223 LYEGATTVVLRDVDPIAILDSIVQHRITNLLLVPAVIQMMLNSPAVDDA--DFSSVRAIV 280
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G + +++ F + + YG+TET+ S+T + +DP
Sbjct: 281 YGASPITDDVLIRGLERF-GCEFLQVYGLTETTGSVTQLDEHDPA--------------- 324
Query: 124 PNSVHQPQGV-CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPS 177
+P+ + GKP P VEL++ +G VG + TR A M YW+ A +
Sbjct: 325 ----GRPELLRSCGKPYPWVELRIVDNGGRTVPVGTVGEVWTRSAQNMRGYWNNPDATAA 380
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
T + WL TGD G +D G V+L R+ I SGGENVYP EVE VL+ H G+ + ++
Sbjct: 381 TVTDDGWLKTGDAGYVDRDGYVYLHDRKKDMIVSGGENVYPIEVENVLMTHAGVDDVAII 440
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + + E V A V + EL+ + RE+ L GFK P+
Sbjct: 441 GVPDEKWGEAVKAIVV---------PTAGTAPTEAELI-------AYARER-LAGFKLPK 483
Query: 298 LFVLWRKPFPLTSTGKIRRDEVR 320
V + P +GK+ + +R
Sbjct: 484 -SVDFTDVLPRNPSGKLLKRVLR 505
>gi|134294240|ref|YP_001117975.1| AMP-binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134137397|gb|ABO53140.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 575
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV T+L VP + +A L + ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ G V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLIDGWMHTGDLATLDGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E + A + LR Q ++ + +R C + + +K
Sbjct: 493 QVFGLPDAKYGEELCAWIVLRAGEQMTDDD----------------VRAFC-QGQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|441509013|ref|ZP_20990935.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441447018|dbj|GAC48896.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 547
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++AL AV + TSL VP + +A+LA L + S++ + G P
Sbjct: 261 PTFDPEAALRAVADYRCTSLYGVPTMFIAELALLDHAEPDQFDLSSLRTGIMAGSPCPEH 320
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M++ ++ YGMTETS ++ T D LE +
Sbjct: 321 VMRQVVERMHMGEVSICYGMTETSP-VSCQTRVDDPLEL-------------------RV 360
Query: 133 VCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH+E+KV + G TRG VM YW++ + W+
Sbjct: 361 GTVGRVGPHLEIKVIDPITGDTLPRGETGEFCTRGYSVMDGYWNEPEKTAEALDADGWMH 420
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+ +D V + GR + GGEN+YP E+E L HP I+ V+G+ + R E
Sbjct: 421 TGDLAVMDPNSYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGE 480
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A V+LR+ D ++ + + ++ R K PR +V K F
Sbjct: 481 ELMAWVQLRDGV------ADLTADDIREFATGKIARH----------KIPR-YVHVVKEF 523
Query: 307 PLTSTGKIRRDEVRREVMSHL 327
P+T TGK+R+ +R E + L
Sbjct: 524 PMTVTGKVRKVAMREESVDLL 544
>gi|229163513|ref|ZP_04291464.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus R309803]
gi|228620082|gb|EEK76957.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus R309803]
Length = 576
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 285 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 342
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 343 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 395
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 396 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 441
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 442 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 501
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 502 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 544
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R+ P T+ GKI R DE +R+
Sbjct: 545 -FREELPKTTVGKILRRVLIDEEKRK 569
>gi|226311685|ref|YP_002771579.1| acyl-CoA synthetase [Brevibacillus brevis NBRC 100599]
gi|226094633|dbj|BAH43075.1| long-chain-fatty-acid--CoA ligase [Brevibacillus brevis NBRC
100599]
Length = 521
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 49/305 (16%)
Query: 22 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 81
L+ VE + T L P + +A L + S++K G +P E++KE
Sbjct: 252 LQTVETYKATQLFCPPTVW--IALLRSPDFAARNLSSLQKCYYGAAIMPVEVLKELGKRL 309
Query: 82 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 141
P A+ + YG TE + T + D + PG GKPA +
Sbjct: 310 PNAQFYNFYGQTEVAPLATVLQPKD-QMRKPG--------------------SAGKPALN 348
Query: 142 VELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDD 195
VE K+ D + V G I+ R +H ML Y+ D+ + + G W +GD+G +DD
Sbjct: 349 VETKIVDDDGNEVPRGSVGEIVHRTSHAMLGYFRDEEKTQAAFQGG--WFHSGDLGIMDD 406
Query: 196 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 255
G + +V R+ IKSGGENV EVE ++ QHP + + V+G+ + E V A V
Sbjct: 407 EGYITVVDRKKDMIKSGGENVASREVEELIYQHPKVSEVAVIGVPHPFWIEAVTAVV--- 463
Query: 256 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 315
K ELL + E+L C+++ L+ FKAP+ +V+ P +GKI
Sbjct: 464 ------------VPKAGELLTADEML-AFCKDR-LSSFKAPK-YVVIADNLPRNPSGKIL 508
Query: 316 RDEVR 320
+ E+R
Sbjct: 509 KRELR 513
>gi|323702368|ref|ZP_08114033.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323532674|gb|EGB22548.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 554
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 144/335 (42%), Gaps = 50/335 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
M ++ GA V + F LE +EQ T++ VP + + L + K S++
Sbjct: 251 MTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELDKKKYDTSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK N ++ YG TE S ++T DP
Sbjct: 309 TGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI------------ 356
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQF 172
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 --------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYKMP 406
Query: 173 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
A WL TGD+G +D G + GR I GGEN+YP E+E L HP +
Sbjct: 407 EATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVK 466
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 467 DVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-IAK 509
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 510 YKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|317029446|ref|XP_001391604.2| AMP-binding enzyme [Aspergillus niger CBS 513.88]
Length = 613
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 155/344 (45%), Gaps = 52/344 (15%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 58
MA GA F F +++AL V++ T+L VP + + +L L + +G
Sbjct: 300 MATATHGAAIAFPTEAFNARAALRTVQEEKCTALYGVPTMFLEELNLLDEGEIPNEGFQY 359
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK +L YGMTETS T DP
Sbjct: 360 LRTGIAAGSSIPAELMKRLHKVLNLTELTICYGMTETSPVSAMTTTDDPI---------- 409
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHVGRILTRGAH------VMLRYWDQ 171
+ VG+ PHVE KV S D +++ I TRG +M YW+
Sbjct: 410 ----------DKRINTVGRLLPHVEAKVVSLDNHNNILPINTRGELAVSGYLLMKEYWND 459
Query: 172 FLAKPSV----STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
+ V G+VW+ TGD S+ G + + GR I GGEN++P E+E LL
Sbjct: 460 PVKTAEVMIADDDGKVWMHTGDEASMSPDGYITITGRVKDLIIRGGENIHPLEIENCLLT 519
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
+PG+I VG+ + R E V + RE ES K +RQ RE
Sbjct: 520 YPGVIDASAVGVPDERYGEAVAVFIIHRE----PESEAADEDK----------IRQWVRE 565
Query: 288 KNLTGFKAPRLFVLWRKP---FPLTSTGKIRRDEVRREVMSHLK 328
K L+ P+ +V + +P FP T++GK+++ ++R + ++ LK
Sbjct: 566 K-LSNHLVPK-YVFFLQPTESFPKTASGKVQKFKLREDALTILK 607
>gi|448301120|ref|ZP_21491115.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
gi|445584634|gb|ELY38949.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
Length = 523
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 143/320 (44%), Gaps = 41/320 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
+ L VGAC+V +F+ + LE +E +T++ VP + L + + + RD
Sbjct: 231 LPALNVGACNVVQHEFDPATTLERIESEGITTMWGVPTHVRALVD----EPSIEDRDIEH 286
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE-TSSSLTFMTLYDPTLETPGQL-P 116
V+ I G +P+ + K A + + ++AYG TE +L + +D L + GQ P
Sbjct: 287 VRMIQYSGAAMPAAVAKRARDHVSDCEFVNAYGTTEIVFGTLIYPEFHDDKLGSIGQAAP 346
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
A V + P V + VG +L + ML YW A
Sbjct: 347 NAAVRVVDSENPVPNAVV---------------DTDEVGELLVNASTCMLEYWRDPEAT- 390
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
V+ + W TGD+G D+ G ++ V R++ I SGGEN+YP EVE +L HP ++ V
Sbjct: 391 DVAIVDGWYRTGDLGRRDEDGFLYFVDRKDDMIVSGGENIYPAEVEDLLHGHPDVVSGAV 450
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
VG+ + E+V A V + D SS + E + L FK P
Sbjct: 451 VGVPDDEWGEVVTAFV--------VPATEDLSSDDLEAFFVA--------SDELESFKRP 494
Query: 297 RLFVLWRKPFPLTSTGKIRR 316
R +V + + P TS+ KI R
Sbjct: 495 RQYV-FEQELPKTSSDKIDR 513
>gi|383790511|ref|YP_005475085.1| acyl-CoA synthetase [Spirochaeta africana DSM 8902]
gi|383107045|gb|AFG37378.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Spirochaeta
africana DSM 8902]
Length = 470
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 150/325 (46%), Gaps = 48/325 (14%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+G+ V IP++ LE + + T LI VP + L + +V+KT + S+ ++G
Sbjct: 179 MGSTMVIIPQYTPSVLLETIARTKATMLIAVPTMYMHLLQIAKVRKTAIPQ-SLHTCISG 237
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G L + ++E ++F + YG+TET+S++ L ++ + P
Sbjct: 238 GAPLAAATLQEFEDAFDTV-IAEGYGLTETTSAVC--------------LNKSGEDYKPG 282
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 180
+ +G PAP +E+KV D + V G I+ RG + YW+ A + S
Sbjct: 283 A--------IGIPAPGIEMKVVDDDGNEVPDGTEGEIIIRGGVLTPGYWND-TASTAESI 333
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
WL TGD+G D G ++ R+ I GG N+ P E+E VL HPGI V +
Sbjct: 334 RNGWLHTGDLGYRDHDGVFFITDRKKDLIIRGGFNISPREIEEVLYGHPGIHEAAVAAVH 393
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ R EMV A V E +E +VL +CR NL +K P+ V
Sbjct: 394 DKRDREMVKAFVVPAEGVSLTE---------------QQVL-DYCR-ANLADYKTPKR-V 435
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMS 325
+ + P ++TGK+ R E+R E +
Sbjct: 436 EFMEALPKSATGKVLRKELRGEAVD 460
>gi|398874629|ref|ZP_10629833.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
gi|398194509|gb|EJM81580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM74]
Length = 565
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVADEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAQAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|300705200|ref|YP_003746803.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
gi|299072864|emb|CBJ44220.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
Length = 571
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
+A GAC VF + F+ + L V + T+L VP + +A L + ++G D
Sbjct: 272 LACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPE--FRGFDVS 327
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P E+MK ++ AYGMTETS P
Sbjct: 328 SLRGGIMAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PV 368
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
+F + + + + + VG+ PH+++K+ DG+ V G + T+G VML YWD
Sbjct: 369 SFQSAVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD 426
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP +
Sbjct: 427 -EAKTAESIHDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKV 485
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ V G+ + + E V A + L+ Q +E E +R C + +
Sbjct: 486 QAVNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIA 528
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 529 HYKIPR-YIRFVPEMPMTVTGKVQKFIMRERMIEELK 564
>gi|340500544|gb|EGR27412.1| hypothetical protein IMG5_195940 [Ichthyophthirius multifiliis]
Length = 496
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 43/324 (13%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F ++ LEA+ ++ T+L VP + + +S+ K + G P LM+
Sbjct: 203 FSAQKTLEAITKYKCTTLYGVPTMFYEYIKEYEAYPHQYNINSLNKGVMAGSLCPQVLME 262
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ N + L YGMTETS ++F T +LE V
Sbjct: 263 KLKNQWNIKDLQICYGMTETSP-VSFQTSKTDSLEDSCS-------------------TV 302
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + +G I RG VM +YWD W+ TGD+
Sbjct: 303 GQILPHLESKLINKKGKIVPRGEIGEIYIRGYSVMQKYWDDIKKTNETIDINSWIKTGDL 362
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
G +D+ G + +VGR I GGEN+YP+E+E L + P I+ + +VGI N + E +
Sbjct: 363 GKMDERGYMQIVGRSKDIIIRGGENIYPKEIEEYLRKIPKIMDVQIVGIPNKKYGEEIFC 422
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+ L N + + + + C K + FK P+ +V FPLT
Sbjct: 423 LIIL----------------NPNVYFDKQEVYEFCNRK-IAYFKVPK-YVKIVDQFPLTV 464
Query: 311 TGKIRRDEVRREVMSHLKSLPSNL 334
TGK ++ + +++ + NL
Sbjct: 465 TGKPQKFIIVNDLIKEMDGNEHNL 488
>gi|307108953|gb|EFN57192.1| hypothetical protein CHLNCDRAFT_21648 [Chlorella variabilis]
Length = 541
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 150/330 (45%), Gaps = 51/330 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAI-MADLA--TLIRVKKTWKGR-DSVKKILNGGGGLPS 71
F ++AL AV+ TSL VP + +A+LA T + V R DS++ + G P
Sbjct: 250 FSPEAALAAVQAEGCTSLYGVPTMFIAELALPTWVVVVVCCAYRLDSLRTGVMAGSPCPV 309
Query: 72 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 131
E+MK+ + AYGMTETS P +F + + V + +
Sbjct: 310 EVMKKVRTEMHMGDVTIAYGMTETS-------------------PVSFQSSVEDPVDR-R 349
Query: 132 GVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
VG+ PH+E +V G+ VG + RG VML YW + E W+
Sbjct: 350 VSTVGRIHPHLEARVVDPGTCKTLPHGSVGELQVRGYSVMLGYWGDAASTAQAIDQEGWM 409
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+ +ID G +VGR I GGEN+YP EVE HP + + V G+ +
Sbjct: 410 RTGDLATIDAQGYCNIVGRIKDMILRGGENIYPREVEEFQHTHPAVADVQVFGVPSRLYG 469
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR-- 303
E V A V+LR+ + S+ ++ LR+ CR K + +K PR W+
Sbjct: 470 EQVCAWVKLRDGF----SHVGRAE-----------LREFCRGK-IARYKVPR---YWKMV 510
Query: 304 KPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
FP+T +GK ++ +R + + L P+
Sbjct: 511 DSFPMTVSGKPQKYLMREQAVQDLALPPAR 540
>gi|282164394|ref|YP_003356779.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
gi|282156708|dbj|BAI61796.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
Length = 569
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ S L A+E+ T++ VP + +A L +++ + G P E M+
Sbjct: 281 FDPISTLTAIEKERCTAVHGVPTMF--IAELEHPDFNKFNLKTLRTGIMAGSPCPIEYMR 338
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++++ YG TE+S LT + +DP + + V
Sbjct: 339 KVSTLMNMSEIVITYGQTESSPGLTMSSTHDPL--------------------EKRVSTV 378
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+P PH ELK+ + + G I RG +M Y+ A E WL TGD
Sbjct: 379 GQPMPHCELKIVDPKTGKMVPRGQPGEICARGYMIMRGYYKNKEATDLAVDEEGWLHTGD 438
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+G++DD + GR + GGEN+YP EVE L +HP I + V+G+ + + E +
Sbjct: 439 LGTLDDEDYCKITGRLKDMVIRGGENIYPREVEEFLYEHPAISDVQVIGVPDMKYGEELC 498
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A ++L KN ++ E+ + C+ K + +K PR ++ + FP+T
Sbjct: 499 AWIKL---------------KNGSVMTPDEI-KAFCKGK-IAHYKIPR-YIKFADEFPMT 540
Query: 310 STGKIRRDEVRR 321
+GKI++ ++R
Sbjct: 541 ISGKIQKYKMRE 552
>gi|409728140|ref|ZP_11271011.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|448723110|ref|ZP_21705635.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
gi|445788065|gb|EMA38787.1| long-chain acyl-CoA synthetase [Halococcus hamelinensis 100A6]
Length = 524
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 150/322 (46%), Gaps = 30/322 (9%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L GA + +P ++++ AL +E +T + VPA+ D+ + + S++ +
Sbjct: 220 LFSGAAYYPLPSWDAQQALSLIESEEITIMQGVPAMYNDIVNQPNLDEF--DCSSLRFVN 277
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
GG LP E+++ F +L YG+TETS F + P PG + Q V
Sbjct: 278 AGGSSLPMEVLRRFEEEF-DIELYEGYGLTETSPVTHFNS---PDARRPGSIGQTLPGVE 333
Query: 124 PNSV-HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST-- 180
V H+ + V P E + DG + G ++ G +VM Y D+ A SV T
Sbjct: 334 AKIVDHEFEPVRKVDRGPVDEGETDLDGIT--GELVVSGPNVMKGYHDRPEANESVFTEE 391
Query: 181 -GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
G W TGD+G D ++V R I +GG NVYP E+E +L +HP + VVGI
Sbjct: 392 GGNRWFHTGDVGYWDAEDFFYIVDREKHMIVTGGYNVYPREIEELLFEHPDVADAAVVGI 451
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ R E V A V + SE E ++++C + +L +K PR
Sbjct: 452 PDERRGETVKAFVVPTPDSETSE----------------EEIKEYCLD-SLAAYKHPRE- 493
Query: 300 VLWRKPFPLTSTGKIRRDEVRR 321
V + + P T+TGK+++ E+R
Sbjct: 494 VEFVEELPRTTTGKVQKFELRE 515
>gi|385206541|ref|ZP_10033411.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385186432|gb|EIF35706.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 518
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 45/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ + G HV IP F++ L A+ + V+ + VP ++ + +T S+K
Sbjct: 218 LVQFIAGEAHVVIPAFDAGDVLRAIGEERVSDTLLVPTMIQAVLNHPDFART--DLSSLK 275
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ G +P L+ + P +L +YGMTE S++ +P +A
Sbjct: 276 RLTYGASPIPETLLDRLIEALPGIQLAHSYGMTEACPSIS--------ANSPSNHDEA-- 325
Query: 121 NVTPNSVHQPQGV--CVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFL 173
+ G+ +G+ P + +KV SDG VG I+ RG +VM YW +
Sbjct: 326 -------GRKSGLYRSIGRGLPGLMVKVVGSDGEEVPRGTVGEIVVRGPNVMAGYWRK-P 377
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + + E WL TGD +D G +++V R I SGGENVY EVE+V+ +HP +
Sbjct: 378 EETAQAVREGWLHTGDGAYMDAQGYLYIVDRIKDMIVSGGENVYSAEVESVIARHPAVAA 437
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+GI + E V A V C + L+ E +R+HCR+ + G+
Sbjct: 438 CAVIGIPHDTWGEAVHAVV-----------VCKPGAT-----LAEEEIREHCRQV-IAGY 480
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K P+ V +R+ PL+ GK+ + +R
Sbjct: 481 KCPK-SVEFREQLPLSGAGKVLKRAIR 506
>gi|443304175|ref|ZP_21033963.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
gi|442765739|gb|ELR83733.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
Length = 479
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ + +E +++ +T L P + L + K +++ +
Sbjct: 213 FLRGATMLPVAVFDIDTVVELIDRERITMLPGPPTLYHSLLGVGDKSKL----STLRAAV 268
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 269 TGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 316
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG ++ RG VM Y D A E
Sbjct: 317 TTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEG 362
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R
Sbjct: 363 WLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDER 422
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 423 MGQVGKAFVVRKGE------------------VSADELIAWCRDR-MAGFKVPRA-VQFL 462
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 463 DSLPLNATGKVMKDQLR 479
>gi|254281943|ref|ZP_04956911.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
gi|219678146|gb|EED34495.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
Length = 517
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 147/331 (44%), Gaps = 55/331 (16%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
MA ++ ACHV +P FE L+ + + ++ + VPA++ L T ++
Sbjct: 219 MASVIEAACHVMLPGFEPSVVLKTLAKERISHSLMVPAMIKMLMNHPEASST--DVSHLQ 276
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+L G +P+ +++ ++P+ LI AYG TE + ++ M
Sbjct: 277 YVLYGASPMPAATLQQFMATWPEVDLIQAYGQTELAPVVSLMA----------------- 319
Query: 121 NVTPNSVHQPQGVCV---GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQF 172
H+ G + GKP ++++ + + G I+ G H ML YW+
Sbjct: 320 ----ADAHRRGGHLLKSAGKPTVVSDVRIVDESGQDLPLGGRGEIIVTGPHTMLGYWN-- 373
Query: 173 LAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + W+ TGD G +DD G +++V R + +GGENV+ EVE ++ H
Sbjct: 374 --KPEETAKALRDGWVYTGDAGYLDDEGFLYIVDRVKDMVVTGGENVFTTEVENAVISHD 431
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ + V+GI + E V A V L+ +E + HCR++
Sbjct: 432 AVQDVAVIGIPHPEWGEAVHAVVVLQPGAAVTEDE----------------IIAHCRDQ- 474
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+ G+K P+ +P PL+ GK+ + E+R
Sbjct: 475 IAGYKLPKSVSFRDEPLPLSGAGKVLKRELR 505
>gi|421889438|ref|ZP_16320475.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
gi|378965202|emb|CCF97223.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
Length = 571
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 53/337 (15%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 57
+A GAC VF + F+ + L V + T+L VP + +A L + ++G D
Sbjct: 272 LACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPE--FRGFDVS 327
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
S++ + G P E+MK ++ AYGMTETS P
Sbjct: 328 SLRGGIMAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PV 368
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
+F + + + + + VG+ PH+++K+ DG+ V G + T+G VML YWD
Sbjct: 369 SFQSAVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD 426
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP +
Sbjct: 427 -EAKTAESIHDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKV 485
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ V G+ + + E V A + L+ Q +E E +R C + +
Sbjct: 486 QAVNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIA 528
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
+K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 529 HYKIPR-YICFVPEMPMTVTGKVQKFIMRERMIEALK 564
>gi|56964438|ref|YP_176169.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
gi|56910681|dbj|BAD65208.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 566
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 52/315 (16%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 66
A V +PKF+ + L +E+ +T P + L R+ + S+K ++G
Sbjct: 276 AATMVLLPKFKPEEVLRTIEKQRITLFPGAPTMYVALVNNERIHQY--DLTSIKACISGA 333
Query: 67 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 126
LP E+ ++ + K +++ YG+TETS V N
Sbjct: 334 SALPLEV-QQKFEAQTKGRIVEGYGLTETSPV-----------------------VCANP 369
Query: 127 VHQPQGV-CVGKPAPHVELKVCS---DGSS---HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ + + VG P P ++ V S DG + VG + RG VM YW +
Sbjct: 370 IWEKRKTGSVGIPWPDTDVMVYSLEKDGEAEIGEVGELFVRGPQVMKGYWMRPEETAQTF 429
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
GE WL TGD+ +D+ G V++V R+ I +GG N+YP EVE VL +H ++ V+G+
Sbjct: 430 HGE-WLKTGDMARMDEEGYVYIVDRKKEIIIAGGFNIYPREVEEVLFEHEAVVQAAVIGV 488
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ E V A + L+ SE + +CR+K L +K PRL+
Sbjct: 489 PDEYRGETVKAFIVLKAGETISEKE----------------MEAYCRQK-LAAYKIPRLY 531
Query: 300 VLWRKPFPLTSTGKI 314
+R P T TGKI
Sbjct: 532 E-FRDELPTTLTGKI 545
>gi|384044693|ref|YP_005492710.1| AMP-dependent synthetase and ligase [Bacillus megaterium WSH-002]
gi|345442384|gb|AEN87401.1| AMP-dependent synthetase and ligase [Bacillus megaterium WSH-002]
Length = 563
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
V +PKF++K+ L+ + + T P I L + K S+ ++G LP
Sbjct: 281 VLLPKFDAKTTLKTIHKQQPTLFPGAPTIYIALLNHPDLAKY--NLSSIDSCMSGSAPLP 338
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+ +E KL+ YG+TETS L++ ++P + G P++ +
Sbjct: 339 VEV-QEQFEKLTGGKLVEGYGLTETSPVTHANFLWEE------RIPGSIGVPWPDTDAKI 391
Query: 131 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
GK A S VG I +G VM YW Q +V + WL TGD+
Sbjct: 392 LSFETGKEA----------AVSEVGEIAVKGPQVMKGYWKQPEETEAVMR-DGWLLTGDV 440
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
G +DD G ++V R+ I +GG N+YP EVE VL +H I VVVG+ + E V A
Sbjct: 441 GYMDDKGYFYVVDRKKDIIIAGGYNIYPREVEEVLYEHEKIQEAVVVGVPDPYRGETVKA 500
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+ L+ + +E ++ S+ K L +K PRL+ +R P T+
Sbjct: 501 YIVLKNGVRCTEEELNEFSR-----------------KYLAAYKVPRLYE-FRNELPKTA 542
Query: 311 TGKI-RRDEVRREVMSHLKS 329
GKI RR + E H K+
Sbjct: 543 VGKILRRALIEEENEKHKKA 562
>gi|388569103|ref|ZP_10155510.1| FadD3 protein [Hydrogenophaga sp. PBC]
gi|388263662|gb|EIK89245.1| FadD3 protein [Hydrogenophaga sp. PBC]
Length = 564
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+S + L V+ T+L VP + +A L +++ + G P E+MK
Sbjct: 280 FDSAAVLRTVQAERCTALYGVPTMF--IAALDHPDFASTDLRTLRTGIMAGSPCPIEVMK 337
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS T + DP + + V
Sbjct: 338 RVQSQMNMGEVTIAYGMTETSPVSTQSAVDDPL--------------------ERRVSTV 377
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E+K+ +DG + VG TRG VM YW E W+ TGD+
Sbjct: 378 GRVQPHLEIKIVDADGRTVPRGTVGEFCTRGYSVMQGYWGDAEKTAEAIDAEGWMHTGDL 437
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
++DD G V +VGR + GGENVYP EVE +HP + + VVG+ +A+ E++ A
Sbjct: 438 ATMDDEGFVNIVGRLKDMVIRGGENVYPREVEEFYYRHPKVQDVQVVGVPDAKYGEVLCA 497
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
C+ ++ L +++ LR + + +K P F + + P+T
Sbjct: 498 CIVVKPG----------------LRCTADELRAFA-QGQIAHYKVPAYFE-FVEALPMTI 539
Query: 311 TGKIRRDEVRREVMSHL 327
TGKI++ +R ++ L
Sbjct: 540 TGKIQKFVLREQMTKKL 556
>gi|119474942|ref|ZP_01615295.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119451145|gb|EAW32378.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 557
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 146/328 (44%), Gaps = 49/328 (14%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
MV C F P+ S L+AV+ T+L VP + LA L + S++ +
Sbjct: 271 MVLPCEAFDPR----SVLQAVQDEKCTALHGVPTMF--LAELDLADFSDFDLSSLRTGII 324
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G P LMK +++ YG TE S + MT + T E
Sbjct: 325 AGSTCPVGLMKRLIGEMALTEIVIGYGQTE-CSPINSMTAIEDTFER------------- 370
Query: 125 NSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+P + E+K+ DGS+ G + RG VM YW+
Sbjct: 371 ------RVTTVGRPHTNWEMKIIREDGSTAATEETGEVCARGYGVMQGYWEDAERTADTI 424
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ WL +GD+G +D G V + GR I GGEN+YP EVE HP I + V G+
Sbjct: 425 DSDGWLHSGDLGEMDAEGFVKITGRIKDMIIRGGENIYPREVEEFFYSHPAIQEVQVFGV 484
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E V A ++L+E QS +S+E L+Q+C + +T +K P+
Sbjct: 485 PDEKYGEQVAAWIQLKEG---------QS-------MSAEALQQYCAGQ-ITHYKVPKHI 527
Query: 300 VLWRKPFPLTSTGKIRRDEVRREVMSHL 327
L + FP+T TGK+++ +R E + L
Sbjct: 528 KLVNE-FPMTVTGKLQKFIMRDEYATEL 554
>gi|264677860|ref|YP_003277766.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208372|gb|ACY32470.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 513
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 150/327 (45%), Gaps = 47/327 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ ML+ G C +P F ++ L ++H T L+ VP ++ L + + R ++
Sbjct: 225 LTMLLAGGCCELVPMFSPEALLRMAQKHPPTWLVGVPTMLTLLLMHPLLAEVDMSR--LR 282
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I+ GG + L++ FP +++ YG++ETS ++ TP Q Q
Sbjct: 283 LIVVGGSNVEPVLLQRLQQQFPGVNIMNLYGLSETSGAIAM---------TPWQADQ--- 330
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAK 175
Q +GKP +L+V +DG S VG + RGA V+ Y Q +
Sbjct: 331 --------QALLHSIGKPLQGAQLRVAGADGEELRSGEVGELWFRGAGVIPAYVGQQQDE 382
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ G WL +GD+G +D+ G + L GR+ GG NVYP EVE V+ H G++ +
Sbjct: 383 EVFAGG--WLHSGDLGFVDEQGLIHLKGRQKDMFIQGGFNVYPSEVEGVIAGHAGVLMVA 440
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
+G+ + L E+ + +R SE E L HCR++ L +K
Sbjct: 441 GIGVPDPVLGEVGRYYIVIRPGASVSE----------------EELLTHCRQQ-LADYKL 483
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRRE 322
PR V +R PLT GKI++ +R E
Sbjct: 484 PRQLV-FRTELPLTPAGKIQKALLRAE 509
>gi|433649080|ref|YP_007294082.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
gi|433298857|gb|AGB24677.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
smegmatis JS623]
Length = 480
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 138/317 (43%), Gaps = 47/317 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ +E VE +T L P + L + K R V
Sbjct: 211 FLRGATMLPVAAFDIDRVVELVEAERITMLPGPPTLYHSLLAVEAKDKLATLRAGV---- 266
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL+ P L++ YG+TE + TL PG +F +V
Sbjct: 267 TGAADIPVELVHRIHEELPFQTLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 314
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE++V DG +L RG VM Y D +A +
Sbjct: 315 TTA---------GLPCEDVEVRVADDGE-----VLVRGYGVMQGYLDDPVATAEAIDADG 360
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS D G + +VGR+ GG N YP E+E LL+HP + V+G+ + R
Sbjct: 361 WLQTGDLGSFTDSGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVPDER 420
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A + K+ + +S + L R++ + GFK PR FV +
Sbjct: 421 MGQVGKAFI---------------VRKDGKTAVSGDELMAWSRDR-MAGFKVPR-FVEFL 463
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 464 DQLPLNATGKVMKDKLR 480
>gi|311029635|ref|ZP_07707725.1| AMP-dependent synthetase and ligase [Bacillus sp. m3-13]
Length = 507
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 53/327 (16%)
Query: 5 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 64
++GA H F L+A+++H +T VPA+ L + S+K+
Sbjct: 221 VLGATHFIHRDFHPVHTLQAIQEHKITHFFGVPAMFNFLLQVPNADSY--DLSSIKRCGY 278
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + EL+K++ N F + + G+TE + L DP
Sbjct: 279 GAAPMAPELVKKSMNLFKNDQFFNLCGLTEAGPN---GILLDPI---------------- 319
Query: 125 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 179
H+ GKP+ E +V + VG + +G +M Y+ KP +
Sbjct: 320 --GHKKHLGKNGKPSFLTEARVVDETGRDIEVGAVGEFILKGESIMKEYY----KKPEET 373
Query: 180 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ WL TGD+ ++D+ GN+ LV R+ I SGGENVY EVE VL +HP ++ +
Sbjct: 374 KAALKDGWLYTGDLATVDEEGNITLVDRKKDMIISGGENVYSIEVEEVLYEHPQVLEAAI 433
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + W E+ C +K+ +++ E L+Q CR+K L G+K P
Sbjct: 434 IGLPDEV----------------WGEAVCAVVVPHKDQVVNEEELKQFCRQK-LAGYKVP 476
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREV 323
R + + P ++GKI + ++R+++
Sbjct: 477 RR-IFLEETLPRNASGKILKYQLRQQL 502
>gi|119503775|ref|ZP_01625857.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460283|gb|EAW41376.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 378
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 146/334 (43%), Gaps = 48/334 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF F+S L+A E+ T+L VP + + L + S+
Sbjct: 83 LACVAHGATMVFPGEDFDSLDTLKAAEEERCTALHGVPTMF--IMELDHPSFSQFDLSSL 140
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+M+ + ++ AYG TE S
Sbjct: 141 RTGIMAGAPCPVEVMRRLISEMHMDDILIAYGQTEVSP---------------------I 179
Query: 120 GNVT-PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 173
N T PN Q + VG+ P VE+KV D V G I TRG VM YW+
Sbjct: 180 NNTTLPNDSLQLRTETVGRAVPWVEIKVIDDSGRVVTVGEKGEICTRGYSVMQGYWNDPE 239
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
WL +GD+ +D G V + GR I GGEN+YP E+E L QHP I
Sbjct: 240 RTAETIDAGGWLHSGDLAVMDGDGYVQIFGRIKDMIIRGGENIYPREIEEFLYQHPAISE 299
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + ++ E V A ++L + LS++ ++ +CR+K +T F
Sbjct: 300 VQVFGVPDEKMGEEVCAWIQLNAGHE----------------LSADDVKDYCRDK-ITHF 342
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P ++ + +P+T T KI++ +R ++ L
Sbjct: 343 KIPH-YIDFVDEYPMTVTSKIQKFVMRDAMVERL 375
>gi|104782040|ref|YP_608538.1| acyl-CoA synthetase [Pseudomonas entomophila L48]
gi|95111027|emb|CAK15747.1| long-chain-fatty-acid-CoA ligase [Pseudomonas entomophila L48]
Length = 556
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 45/317 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L+AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 278 FDPLLTLQAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRTGIMAGATCPIEVMR 335
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ ++ AYGMTETS P L + V V
Sbjct: 336 RVIDEMHMGEVQIAYGMTETS---------------PVSLQTGAADDLERRV-----TSV 375
Query: 136 GKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E KV S+G++ VG + TRG VM+ YW+ A + W+ TGD+
Sbjct: 376 GRTQPRLETKVIDSEGATLPRGEVGELCTRGYSVMIGYWNNPKATAESIDSDGWMHTGDL 435
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA
Sbjct: 436 AVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVA 495
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
VRL SE + +K + + FK PR F + FP+T
Sbjct: 496 WVRLHPGHAASEDELREWAKAR-----------------IAHFKVPRHFRFVDE-FPMTV 537
Query: 311 TGKIRRDEVRREVMSHL 327
TGK+++ +R ++ L
Sbjct: 538 TGKVQKFRMREISIAEL 554
>gi|256824004|ref|YP_003147964.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Kytococcus
sedentarius DSM 20547]
gi|256687397|gb|ACV05199.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Kytococcus
sedentarius DSM 20547]
Length = 516
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 43/328 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-----DS 58
++ GA +P+FE+ ALE +E+ V VP + L + ++ +G+ +
Sbjct: 219 VVAGATLTLLPRFEAGKALEMIERDAVNVFEGVPTMYGGLIAAAKAREA-EGKPPVDTST 277
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
+++ ++GG LP E ++ +F A ++ YG++ETS F
Sbjct: 278 LRRCVSGGSSLPMETLRAFEQTF-GADILEGYGLSETSPVACF----------------- 319
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQF 172
N + + +G P VE+ + + VG ++ RG ++M YWD
Sbjct: 320 ------NHPGRTRAGSIGHPIRGVEMAILDPVTGQPVEPGEVGEVVIRGENIMKGYWDNP 373
Query: 173 LA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
A + ++ G W +GD+G +D G ++V R I GG NVYP EVE VL +HP +
Sbjct: 374 EATERAIRDG--WFHSGDLGRVDPDGFFFIVDRVKDLIIRGGTNVYPREVEEVLYEHPKV 431
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ VVG A+ L E V A V + + + E+ + L+ E LR H +++ L
Sbjct: 432 LEAAVVGSAHPELGEEVTAYV-VAQPGELDEAALSDAESPAARALADE-LRAHAKDQ-LA 488
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEV 319
+K PR + + P TGKI + E+
Sbjct: 489 AYKYPR-HIHFLAELPKGPTGKILKREL 515
>gi|300788314|ref|YP_003768605.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|384151750|ref|YP_005534566.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|399540198|ref|YP_006552859.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|299797828|gb|ADJ48203.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei U32]
gi|340529904|gb|AEK45109.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
gi|398320968|gb|AFO79915.1| long-chain acyl-CoA synthetase [Amycolatopsis mediterranei S699]
Length = 501
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 151/328 (46%), Gaps = 54/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A GA V +P+F+ ++ALE +++ VT VP + L + +
Sbjct: 219 AGFAAGATLVLLPRFDPRTALELMQREGVTFFAGVPTMYWGLVGADPAEFDLDAITGTLR 278
Query: 62 I-LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
I ++GG LP E++++ + ++ YG++ETS TF PG++ +
Sbjct: 279 IAVSGGAALPVEILEQVHKIY-GVRIREGYGLSETSPVATF--------NHPGRVAK--- 326
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
P S+ G+P VELK+ + V G I RG +VM Y L +
Sbjct: 327 ---PGSI--------GQPVWGVELKLIDKDGTEVPDGEAGEIAIRGHNVMKGY----LGR 371
Query: 176 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 232
P + + W TGDIG+ D G ++V R I GG NVYP E+E V++ HP +
Sbjct: 372 PDATAQAIRDGWFRTGDIGTRDTDGYYFIVDRAKDMIVRGGFNVYPRELEEVIMTHPAVS 431
Query: 233 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 292
+ VVG+ + E V A V + + L+ L C++ N+ G
Sbjct: 432 LVAVVGVPHPSHGEEVKAFV----------------IRKPDATLTEPELVSWCKQ-NMAG 474
Query: 293 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
+K PR+ V +R FP+TSTGK+ + E+R
Sbjct: 475 YKYPRV-VEFRDEFPMTSTGKVLKRELR 501
>gi|67536978|ref|XP_662263.1| hypothetical protein AN4659.2 [Aspergillus nidulans FGSC A4]
gi|40741271|gb|EAA60461.1| hypothetical protein AN4659.2 [Aspergillus nidulans FGSC A4]
gi|259482504|tpe|CBF77049.1| TPA: AMP-binding enzyme, putative (AFU_orthologue; AFUA_5G08470)
[Aspergillus nidulans FGSC A4]
Length = 598
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 156/343 (45%), Gaps = 48/343 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDS 58
MA G+ VF + F ++ L AV++ T+L VP + + +L L + KG +
Sbjct: 285 MATATHGSAIVFPAEAFNARDTLRAVQEEQCTALYGVPTMFLEELGLLESGQVPHKGFEY 344
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK+ + +L YGMTETS T DP
Sbjct: 345 LRTGIAAGSSIPAELMKKLHKTLNLTELTICYGMTETSPVSAMTTTDDPI---------- 394
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQ 171
+ VG+ PHVE KV + G + G +M YW
Sbjct: 395 ----------DKRINTVGRLMPHVEAKVVDPLDRNKILPINSRGELAVSGYLLMKGYWGD 444
Query: 172 FLAKPSV----STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 227
V G+VW+ TGD +I G V + GR I GGEN++P E+E LL
Sbjct: 445 PEKTAEVMLKDKDGKVWMHTGDEATISPDGYVTITGRIKDLIIRGGENIHPLEIENCLLT 504
Query: 228 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 287
PG+ + VVG+ +A E+V A V W+ + N ++ ++ + E LR+ RE
Sbjct: 505 FPGVADVSVVGVPDAHYGEVVAAFV----IWKQAHQNTEEQAE------TGEKLRKFVRE 554
Query: 288 KNLTGFKAPRLFVLWRKP---FPLTSTGKIRRDEVRREVMSHL 327
K L+ P+ ++ + +P FP T++GKI++ +++ + L
Sbjct: 555 K-LSAHLVPK-YIFFLEPTDSFPKTASGKIQKFKLKETAIKLL 595
>gi|226182977|dbj|BAH31081.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 529
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 152/331 (45%), Gaps = 53/331 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM-ADLATLIRVKKTWKGRDSVK 60
A + VGA V +P+F++ +ALE + + ++ VP + L L V K+ ++V
Sbjct: 236 AGICVGATLVLMPRFDATAALEIMGREKISVFAGVPTMYWGLLGVLEEVVKSGVDVETVA 295
Query: 61 K----ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 116
+ ++GG LP E++ + F +++ YG++ETS F DP
Sbjct: 296 QNMRCAISGGAALPVEILTQFRERF-GVQILEGYGLSETSPLALFS---DPE-------- 343
Query: 117 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWD 170
P+ +G P VE ++ D G VG + RG +VM Y++
Sbjct: 344 -----------SDPRPGSIGVPIWGVEARLVDDSWRTITGPDEVGELAIRGHNVMKGYFN 392
Query: 171 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
+ A V + W TGD+ +D GN ++V R I GG NVYP E+E VLL HP
Sbjct: 393 RPEATAEVMC-DGWFRTGDLARVDTDGNYYIVDRAKDMIVRGGFNVYPREIEEVLLTHPA 451
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ + VVG+ + L E VVA V S + SES+ + S+ + +
Sbjct: 452 VSLVAVVGVPDTSLGEEVVAFVIREPSEEISESDLVEWSREQ-----------------M 494
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 321
+K PR + + P+T+TGKI + E+ +
Sbjct: 495 AAYKYPRR-IEFVPSLPMTATGKILKRELNQ 524
>gi|78043399|ref|YP_359298.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995514|gb|ABB14413.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 556
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 158/326 (48%), Gaps = 52/326 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
++ GA + +P+F L+ + ++ T P I + R+K S++ +
Sbjct: 273 VLTGATLLIMPRFNVDEMLKTIVKYRPTLFPGAPTIYVAIINHPRIKDY--DITSIRLCI 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP--TLETPGQLPQAFGN 121
+G LP E +K+ +++ YG+TE+S +T +P +LE PG + +
Sbjct: 331 SGSAPLPVE-VKKKFEEITGGRIVEGYGLTESSP----VTHCNPVHSLEKPGSVGLPLSD 385
Query: 122 -----VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP 176
V P++++ V +G+ VG + +G VM YW++ +
Sbjct: 386 TLCMVVEPDTLNP---VAIGE----------------VGEVAVKGPQVMKGYWNR-PEET 425
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
++ E WL TGD+G +D+ G +++V R+ I SGG N+YP EVE VL +HP + VV
Sbjct: 426 ALVLKEGWLLTGDLGRMDEDGYLYIVDRKKDLIISGGYNIYPREVEEVLYEHPKVKEAVV 485
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+G+ + E+V A + L+E+ E S E+++ HC+EK L +K P
Sbjct: 486 IGVPDEYRGEVVKAFIVLKEN---------------ETATSEEIIK-HCQEK-LAKYKVP 528
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRRE 322
+ +V +R P T+ GK+ R +R E
Sbjct: 529 K-YVEFRTELPKTTVGKVLRRALREE 553
>gi|126438681|ref|YP_001060959.1| AMP-binding protein [Burkholderia pseudomallei 668]
gi|126218174|gb|ABN81680.1| AMP-binding domain protein [Burkholderia pseudomallei 668]
Length = 576
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 47/333 (14%)
Query: 1 MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF FE + L AV T+L VP + +A L ++
Sbjct: 277 LACVSAGAKMVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK +++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T +S+ + + VG+ PH+E K+ + V G + TRG VML YWD A
Sbjct: 376 QSATTDSLEK-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EA 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + + W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I +
Sbjct: 434 RTREAVVDGWMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSV 493
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +++ E V A + LR ++ + LR+ C + +K
Sbjct: 494 QVFGVPDSKYGEEVCAWIVLRAGET----------------MTDDELREFC-SGQIAHYK 536
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR +V + P+T TGK+++ +R ++ L
Sbjct: 537 VPR-YVRFVDELPMTVTGKVQKFVMRERMIDGL 568
>gi|410902581|ref|XP_003964772.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Takifugu rubripes]
Length = 904
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 148/334 (44%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
M+M + G VF + ++ LEA+++ + P + DL + K SV
Sbjct: 607 MSMAVHGITLVFPSHGYNCQANLEAIQKEKCNFIYGTPTMFTDLLNHPDLPKY--DLSSV 664
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + GG P E+M++ +L+ YG TE S + TF+ PQ
Sbjct: 665 EAGIIGGSPCPQEIMRKLITKINMKELVVVYGTTENSPA-TFLGF-----------PQDR 712
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
++ N+V G H E K+ + G ++ RG VM YW+ +
Sbjct: 713 EDLKTNTV--------GCIMDHTEAKIVDPVTGQTVPLGTSGELMIRGYCVMKGYWNDPV 764
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
T W TGD S++ G + GR I GGEN+YP E+E L QHP I
Sbjct: 765 KTSEAITDGQWYKTGDTASLNSLGYCQIEGRIKDLIIRGGENIYPAEIEQFLFQHPKIQE 824
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ VVG+ + RL E V AC+RL+ QSS S E ++ C+ + ++ F
Sbjct: 825 VQVVGVKDERLGEQVCACIRLKNG---------QSS-------SPEEIKAFCKGQ-ISHF 867
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
K P +V++ +PLT +GKI++ ++ + L
Sbjct: 868 KIPH-YVVFVDGYPLTVSGKIKKHVLKERMEQQL 900
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 58 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
SV+ + GG P E+M++ +L+ YG TE S + TF+ PQ
Sbjct: 296 SVEAGIIGGSPCPQEIMRKLIRKISMKELVVVYGTTENSPA-TFLGF-----------PQ 343
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 171
++ N+V G H E KV + G ++ RG VM YW+
Sbjct: 344 DREDLKTNTV--------GCIMDHTEAKVVDPVTGQTVPLGTSGELMIRGYCVMKGYWND 395
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
+ T W TGD S++ G + GR I GGEN+YP E+E L QHP I
Sbjct: 396 PVKTSEAITDGQWYKTGDTASLNSLGYCQIEGRIKDLIIRGGENIYPAEIEQFLFQHPKI 455
>gi|423452195|ref|ZP_17429048.1| hypothetical protein IEE_00939 [Bacillus cereus BAG5X1-1]
gi|423470725|ref|ZP_17447469.1| hypothetical protein IEM_02031 [Bacillus cereus BAG6O-2]
gi|423557896|ref|ZP_17534198.1| hypothetical protein II3_03100 [Bacillus cereus MC67]
gi|401141575|gb|EJQ49129.1| hypothetical protein IEE_00939 [Bacillus cereus BAG5X1-1]
gi|401192102|gb|EJQ99120.1| hypothetical protein II3_03100 [Bacillus cereus MC67]
gi|402435240|gb|EJV67275.1| hypothetical protein IEM_02031 [Bacillus cereus BAG6O-2]
Length = 561
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|365091482|ref|ZP_09328883.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363416088|gb|EHL23211.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 525
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 157/340 (46%), Gaps = 43/340 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--- 57
+AM ++ V +P+F+++ AL+ +E +T L VP + D+ L + +++ +G
Sbjct: 217 LAMALIDGVFVCMPRFDTQGALDLIEAERLTCLYLVPTLYHDV--LTQRERSGRGSGPGP 274
Query: 58 ---SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 114
SVKK+ G + L+K +F ++ YG SS + ++ L+ PG
Sbjct: 275 DIASVKKLGFAGAPMHDALLKRLQAAFEPELFVNHYG----SSEVYTFSIDQQALDKPGS 330
Query: 115 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA 174
+A N V G + P VE ++ +D RG YW + A
Sbjct: 331 AGRAGINTRLRVVRLDAGDVDARVGPGVEGQIIAD---------LRGDEAFEGYWKREDA 381
Query: 175 KP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
S+ +G W TGD G +D+ G++++ GR + I SGGEN+ P ++E+V+ PG+
Sbjct: 382 NAKSLRSG--WYFTGDTGYLDEDGDLFVTGRVDDMIISGGENISPVDIESVISLCPGVGE 439
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+++ R + VVA V ++++ L + L HCR +L F
Sbjct: 440 VAVAGLSDERWGQRVVAFV---------------TTRDGGAPLDAHALDAHCRSSDLPNF 484
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 333
K PR +V + P + GK+ R R+ V LP+
Sbjct: 485 KRPREYVFVAE-IPKSPVGKVLR---RKLVAGEYTPLPAG 520
>gi|93005170|ref|YP_579607.1| AMP-binding domain-containing protein [Psychrobacter cryohalolentis
K5]
gi|92392848|gb|ABE74123.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
Length = 602
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 52/336 (15%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+A+L G C V+ P FE S L+AVE+ T L VP + +A L + +
Sbjct: 308 LAILTHGGCIVY-PNDGFEPLSVLQAVEEEKCTGLHGVPTMF--IAELDHPEFENFDLST 364
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G P E+M+ + ++ AYGMTETS + P
Sbjct: 365 LRTGIMAGSSCPIEIMRRVIDEMHMKEVTIAYGMTETSPVSCQTNEHTPL---------- 414
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQ 171
Q VG P +E+KV + + G +LTRG VM YW +
Sbjct: 415 ----------DKQVSTVGLVQPALEVKVIDTETGEIVRLGETGELLTRGYSVMKGYWGSR 464
Query: 172 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 231
F + ++ G W+ TGD+ ++D+ G V +VGR + GGEN+YP E+E L +HP I
Sbjct: 465 FKTREAIQDG--WMHTGDLATMDEDGYVKIVGRSKDMVIRGGENIYPVEIENYLYRHPKI 522
Query: 232 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 291
+ +VG+ + + E++ A + +E+ L+ E +RQ C E ++
Sbjct: 523 RDVQIVGVPDEKYGEVLAAWIIPKEAGS----------------LTEEEVRQFCSE-HIA 565
Query: 292 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+K P + + +P+T TGKI++ ++ ++ L
Sbjct: 566 HYKVPAYYRFVTE-YPMTITGKIQKYKIIEQMKEEL 600
>gi|319792929|ref|YP_004154569.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315595392|gb|ADU36458.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 519
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 62/330 (18%)
Query: 7 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILN 64
G H IP F + L A+E+ VT ++ VP + + L+ + RD S+K I
Sbjct: 224 GNTHSIIPMFSPEGVLHAIEKDRVTHILLVPTM---IQMLVDHPAMREPRDLASLKCIAY 280
Query: 65 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 124
G + ++ A ++FP + AYGMTE S + P
Sbjct: 281 GASPISESVLNRAMDAFPGVDFVQAYGMTELSP---------------------LATINP 319
Query: 125 NSVHQPQGVCVGKPAPHVELKVCS-------DGSSH----VGRILTRGAHVMLRYWDQFL 173
H +G +GK C+ DG+ VG I RG +VM YW+
Sbjct: 320 ARNHTAEGRKLGKLRSAGRASYCTEVRIVDADGAEAPRGTVGEIAVRGPNVMQGYWN--- 376
Query: 174 AKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 230
KP + V W+ TGD +DD G V++V R I SGGEN+Y EVE + QHP
Sbjct: 377 -KPEQTAAAVRDGWMHTGDGAYMDDDGYVFVVDRLKDMIISGGENIYSAEVENAITQHPA 435
Query: 231 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 290
+ V+GI + E V A + L+ Q ++ EL+ HC+ +
Sbjct: 436 VAACAVIGIPSEEWGEAVHAALVLKPG---------QGIRDDELI-------AHCKTL-I 478
Query: 291 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 320
G+K PR + PL+ GK+ + ++R
Sbjct: 479 AGYKCPRSVAIV-DALPLSGAGKVLKTKLR 507
>gi|423612711|ref|ZP_17588572.1| hypothetical protein IIM_03426 [Bacillus cereus VD107]
gi|401244699|gb|EJR51058.1| hypothetical protein IIM_03426 [Bacillus cereus VD107]
Length = 561
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGVECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|115350155|ref|YP_771994.1| AMP-binding domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280143|gb|ABI85660.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 575
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 151/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV T+L VP + +A L + ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E + A + LR Q SE + +R C + +K
Sbjct: 493 QVFGVPDAKYGEELCAWIVLRADEQMSEDD----------------VRAFC-NGQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|423395196|ref|ZP_17372397.1| hypothetical protein ICU_00890 [Bacillus cereus BAG2X1-1]
gi|423406055|ref|ZP_17383204.1| hypothetical protein ICY_00740 [Bacillus cereus BAG2X1-3]
gi|401655011|gb|EJS72547.1| hypothetical protein ICU_00890 [Bacillus cereus BAG2X1-1]
gi|401660508|gb|EJS77988.1| hypothetical protein ICY_00740 [Bacillus cereus BAG2X1-3]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETVAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP E+E VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREIEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|297616773|ref|YP_003701932.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144610|gb|ADI01367.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
Length = 503
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 141/316 (44%), Gaps = 50/316 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L VGAC V + +F ALE + ++ VT VP + + L ++ S K
Sbjct: 225 LNVGACSVTMRRFSPDKALELISRYRVTHFTGVPTMF--IYMLHHFEEDKYDLTSWKYAY 282
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P + +KE F + YG+TET+S++T+
Sbjct: 283 AAGASMPVQYIKEVEEKF-GVEFAELYGLTETTSTVTY---------------------- 319
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSV 178
N + + VG A E+K+ + + VG IL +G V YW+ A
Sbjct: 320 -NRIGHGKKGSVGLAAEGTEVKLVDEAGNQARVGEVGEILVKGPGVFKGYWEMPEATREA 378
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
GE W TGD+G D+ G +++VGR+ I GG NVYP E+E V+ QHP + VVG
Sbjct: 379 FDGE-WYRTGDLGKYDEEGYLYIVGRKKEMIVCGGYNVYPREIEEVICQHPKVAEAAVVG 437
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ ++ E+ A VRL E + +E +ELL + C ++ + +K PR
Sbjct: 438 VRDSARNEIPKAFVRLNEGEEMTE---------QELL-------EFCAQR-MASYKVPRQ 480
Query: 299 FVLWRKPFPLTSTGKI 314
V + P + +GKI
Sbjct: 481 -VEFVPELPKSPSGKI 495
>gi|452961148|gb|EME66455.1| putative AMP-dependent synthetase [Rhodococcus ruber BKS 20-38]
Length = 507
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 49/334 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
M+ GA + F+ + L+ V + +T + VP + ++ + T+ D
Sbjct: 207 MSAFTAGASLSLLSPFDPAAMLDLVVRDRLTVVCGVPTMWN---AMLHAESTYGPADFEG 263
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ ++GG LP E+ ++ + F + YG+TET++ TF + G +P
Sbjct: 264 LRLAVSGGASLPGEVARDFEHRF-GCTIREGYGLTETTAMATF---------SWGDVPAR 313
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFL 173
G G AP +E++V DG++ VG + RG VM YW +
Sbjct: 314 IGYS-------------GTAAPDIEVEVYGPDGAACGPGEVGEVFVRGPVVMAGYWQRPA 360
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+V E W TGD+G D+ G + +V R + GG NVYP EVE VL +HP ++
Sbjct: 361 DTAAVLDDEGWFRTGDLGEFDEQGRLRIVDRVKDLVIRGGYNVYPSEVEEVLYEHPDVVE 420
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
VVG+ + E + A V LR+ + ++ D +E + + CRE+ L+ +
Sbjct: 421 AAVVGVPDRHYGEEIAAVVVLRDG---AGADAD-----------AEGIVRWCRER-LSAY 465
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
KAPR+ V + P ++GKI + + R+ +S
Sbjct: 466 KAPRI-VRFVDALPKGASGKILKRAIDRDELSRF 498
>gi|384182334|ref|YP_005568096.1| long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328418|gb|ADY23678.1| long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKQY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 530 -FRDELPKTTVGKILR 544
>gi|429756335|ref|ZP_19288932.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171453|gb|EKY13073.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 542
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|423591501|ref|ZP_17567532.1| hypothetical protein IIG_00369 [Bacillus cereus VD048]
gi|401232869|gb|EJR39367.1| hypothetical protein IIG_00369 [Bacillus cereus VD048]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 70/337 (20%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV- 122
+G LP E+ +E KL+ YG+TE+S P GN
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESS-------------------PVTHGNFL 367
Query: 123 ----TPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQF 172
P S+ G P P E + S G S +G I+ +G +M YW+
Sbjct: 368 WEKRVPGSI--------GVPWPDTEAIIMSLETGDSLPPGEIGEIVVKGPQIMKGYWN-- 417
Query: 173 LAKPSVSTG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H
Sbjct: 418 --KPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHE 475
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ +V +G+ + E V A V L+E + SE DQ ++ K
Sbjct: 476 KVQEVVTIGVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KY 518
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRR----DEVRRE 322
L +K P+++ +R P T+ GKI R DE +R+
Sbjct: 519 LAAYKVPKVYE-FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|377574787|ref|ZP_09803802.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
gi|377536492|dbj|GAB48967.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
Length = 543
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 141/329 (42%), Gaps = 48/329 (14%)
Query: 7 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ +AL AVEQ TSL VP + +A L S++ +
Sbjct: 251 GACMVIPGPTFDPVAALTAVEQEHCTSLYGVPTMF--IAELGLPNFADFDLSSLRTGIMS 308
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E MK+ + A+++ YGMTETS T D
Sbjct: 309 GSPCPVEAMKKVIDRMGMAEVVICYGMTETSPVSTITRADDDM----------------- 351
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 179
+ + VG+ PHVE+++ + G TRG VM YW+
Sbjct: 352 ---RRRTETVGRAMPHVEIQILDPVTGERVPRGTTGEFCTRGYSVMKGYWNAPERTAEAI 408
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ TGD+ +D+ G +VGR + GGEN+YP E+E L HP I + VVG+
Sbjct: 409 DADGWMHTGDLAVMDEDGYCAIVGRMKDMVIRGGENIYPREIEEFLYTHPAIADVSVVGV 468
Query: 240 ANARLTEMVVA-CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E ++A + + + + D+ S + L +K PR
Sbjct: 469 PDEKYGEELMAWIITVPGHEALTAEDLDEFSAGR-----------------LAHYKVPR- 510
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+V FP+T TGKIR+ ++R E + L
Sbjct: 511 YVHCVDSFPMTVTGKIRKVDMRDEAVRLL 539
>gi|367468134|ref|ZP_09468029.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
gi|365816794|gb|EHN11797.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
Length = 530
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 140/327 (42%), Gaps = 44/327 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--S 58
L+ GA HV + +F + A+E+H VT + VP ++ L V + D S
Sbjct: 229 FGALVAGAGHVIVDRFTPEGTAVAIERHGVTHALLVPTMIG----LFVVDPAAREHDLSS 284
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ +L GG + ++ A P L+ AYG +E LT ++ E P
Sbjct: 285 LQGLLYGGSPMTESVIAAAQELLPGTGLVQAYGQSEAGPILTMLSAERHVFEGPLAGKTR 344
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFL 173
G G+P V++ + D + VG I RG +VM YW+
Sbjct: 345 SG---------------GEPVIGVDVAILDDDGNELPRGDVGEICGRGDNVMAGYWN-LP 388
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + + WL TGD G +DD G V++V R I +GGENVY EVE + HP ++
Sbjct: 389 DQTAKALRHGWLYTGDAGYMDDDGFVFVVDRLKDMIVTGGENVYTAEVENAIAAHPEVVE 448
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+GI + + E V A V +RE L E L HC++ + +
Sbjct: 449 CAVIGIPSEKWGEQVHAVVAVREGSA----------------LDGEALIAHCKQL-IANY 491
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVR 320
K PR + P + GKI + +R
Sbjct: 492 KCPRSVEIRTGELPRSGAGKILKTTLR 518
>gi|254250970|ref|ZP_04944288.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
gi|124893579|gb|EAY67459.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
Length = 575
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV + T+L VP + +A L + ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIIDPSGDIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLIDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ + + E + A + LR + Q +E + +R C + + +K
Sbjct: 493 QVFGVPDPKYGEELCAWIVLRANEQMTEDD----------------VRAFC-QGQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|423512623|ref|ZP_17489154.1| hypothetical protein IG3_04120 [Bacillus cereus HuA2-1]
gi|402448545|gb|EJV80387.1| hypothetical protein IG3_04120 [Bacillus cereus HuA2-1]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|423673705|ref|ZP_17648644.1| hypothetical protein IKS_01248 [Bacillus cereus VDM062]
gi|401310312|gb|EJS15632.1| hypothetical protein IKS_01248 [Bacillus cereus VDM062]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|374611314|ref|ZP_09684101.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373549442|gb|EHP76109.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 496
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 39/330 (11%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++P+F + + V VTS VP ++ + + + + S++
Sbjct: 199 LSNLYAGRKMVYLPQFGAAEWVRLVRDEGVTSATVVPTMLDRIVSALDSQPV--ALPSLR 256
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ GG + L+++A P+ ++AYG+TETSS++ +T P A
Sbjct: 257 NLAYGGSKVALPLVRKALGLLPEVGFVNAYGLTETSSTIAVLT--------PDDHRDAMA 308
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+ T +V + G VG+P P VEL++ SD G+ G + RG V RY +
Sbjct: 309 S-TDVTVTRRLG-SVGQPVPGVELQIRSDDGTVLGAGETGELFVRGEQVSGRYAE----I 362
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV E W T D+ IDD G +++ GR + I GGEN+ P E+E VL++HP +
Sbjct: 363 GSVLDAEGWFPTKDVAWIDDAGYLFIGGRSDDTIIRGGENIAPAEIEDVLVEHPLVHDCA 422
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG + QW + + LR+H R + L G +
Sbjct: 423 VVG----------------PDDPQWGQIIVAVVVPAAGAKPDPDELREHVRSQ-LRGSRT 465
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMS 325
P V++R P +TGK+ R E+ +E+ +
Sbjct: 466 PDR-VVFRDELPTNATGKVLRRELVQELTA 494
>gi|229013725|ref|ZP_04170854.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides DSM 2048]
gi|228747647|gb|EEL97521.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides DSM 2048]
Length = 576
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 285 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 342
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 343 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 395
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 396 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 441
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 442 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 501
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 502 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 544
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 545 -FRSELPKTTVGKILRRVLIDEEKRK 569
>gi|229135358|ref|ZP_04264148.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST196]
gi|228648111|gb|EEL04156.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BDRD-ST196]
Length = 576
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 285 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 342
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 343 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 395
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 396 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 441
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 442 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 501
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 502 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 544
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 545 -FRSELPKTTVGKILRRVLIDEEKRK 569
>gi|170731479|ref|YP_001763426.1| AMP-binding domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254246700|ref|ZP_04940021.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|124871476|gb|EAY63192.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|169814721|gb|ACA89304.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 575
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV + T+L VP + +A L ++
Sbjct: 276 LACVSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPAFPTFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E + A + LR Q +E + +R C + + +K
Sbjct: 493 QVFGVPDAKYGEELCAWIVLRADEQMTEDD----------------VRAFCTGQ-IAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRERMIEELK 568
>gi|423400630|ref|ZP_17377803.1| hypothetical protein ICW_01028 [Bacillus cereus BAG2X1-2]
gi|401654468|gb|EJS72009.1| hypothetical protein ICW_01028 [Bacillus cereus BAG2X1-2]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P EL G I+ +G +M YW+ KP +
Sbjct: 381 PDTEANIMSLETGEALPPGEL----------GEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|393780324|ref|ZP_10368542.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608796|gb|EIW91634.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 542
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|429746669|ref|ZP_19280005.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429165564|gb|EKY07608.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 542
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|423660634|ref|ZP_17635803.1| hypothetical protein IKM_01031 [Bacillus cereus VDM022]
gi|401301845|gb|EJS07431.1| hypothetical protein IKM_01031 [Bacillus cereus VDM022]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|256820840|ref|YP_003142119.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256582423|gb|ACU93558.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 542
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 143/314 (45%), Gaps = 50/314 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++ LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 259 FDATKTLEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMK 316
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
++ YGMTETS T + P + Q V
Sbjct: 317 RVKEQMNMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSV 356
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G H+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD
Sbjct: 357 GTIHDHLEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGD 416
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +D+ G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+
Sbjct: 417 LAMMDEDGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVM 476
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFP 307
A ++ +E + L+ E L C+ + + +K PR W+ + FP
Sbjct: 477 AWIKPKEG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFP 516
Query: 308 LTSTGKIRRDEVRR 321
+T +GKIR+ E+R
Sbjct: 517 MTISGKIRKVEMRE 530
>gi|423670087|ref|ZP_17645116.1| hypothetical protein IKO_03784 [Bacillus cereus VDM034]
gi|401297744|gb|EJS03351.1| hypothetical protein IKO_03784 [Bacillus cereus VDM034]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|110678441|ref|YP_681448.1| long chain fatty acid acyl-CoA ligase [Roseobacter denitrificans
OCh 114]
gi|109454557|gb|ABG30762.1| putative long chain fatty acid acyl-CoA ligase [Roseobacter
denitrificans OCh 114]
Length = 565
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 49/317 (15%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F++++ LEAV + T+L VP + + L S++ + G P E+M+
Sbjct: 286 FDARTTLEAVTREKCTALYGVPTMFVNALELADFDAF--DLSSLRTGIMAGAPCPIEVMR 343
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + AYGMTETS ++F + D LE + V
Sbjct: 344 QVQARMHMHGVTIAYGMTETSP-VSFQSNVDDPLEK-------------------RVSSV 383
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PHVE+K+ + V G +LTRG VML YW+ + + W+ TGD+
Sbjct: 384 GRIHPHVEVKIVDATGNTVKTGEQGELLTRGYSVMLGYWEDDAQTAASIDAQGWMHTGDL 443
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+D G + GR I GGEN+YP E+E L HP I+ V GI + +L E V A
Sbjct: 444 ARLDADGFCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDHKLGEAVCA 503
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
+ R +E++ ++ CR + FK P +V ++ P+T
Sbjct: 504 WIVARAGSDLTETD----------------VQDFCRSA-IAHFKVPA-YVSFKDELPMTV 545
Query: 311 TGK----IRRDEVRREV 323
TGK + RD + +E+
Sbjct: 546 TGKPQKFVMRDRMVKEL 562
>gi|423368554|ref|ZP_17345986.1| hypothetical protein IC3_03655 [Bacillus cereus VD142]
gi|423519207|ref|ZP_17495688.1| hypothetical protein IG7_04277 [Bacillus cereus HuA2-4]
gi|401080080|gb|EJP88370.1| hypothetical protein IC3_03655 [Bacillus cereus VD142]
gi|401159564|gb|EJQ66947.1| hypothetical protein IG7_04277 [Bacillus cereus HuA2-4]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|70731294|ref|YP_261035.1| AMP-binding protein [Pseudomonas protegens Pf-5]
gi|68345593|gb|AAY93199.1| long-chain-fatty-acid--CoA ligase [Pseudomonas protegens Pf-5]
Length = 567
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L AV + T L VP M +A L + +++ S++ + G P E+M+
Sbjct: 284 FDPLLTLTAVAEERATGLYGVP--MMFIAVLDQPRRSEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS ++ T D LE VT V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSP-VSLQTGPDDDLEL---------RVT----------TV 381
Query: 136 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ PH+E K+ + + +G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPHLESKIIDEAGNVVPRGTIGELCTRGYSVMLGYWNNPEGTRESIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
+++ G V + GR I GGEN+YP E+E HP + + V+GI R E +VA
Sbjct: 442 ATMNQQGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCDRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSANELE-------LQTWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|423598183|ref|ZP_17574183.1| hypothetical protein III_00985 [Bacillus cereus VD078]
gi|401237644|gb|EJR44095.1| hypothetical protein III_00985 [Bacillus cereus VD078]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 70/337 (20%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV- 122
+G LP E+ +E KL+ YG+TE+S P GN
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESS-------------------PVTHGNFL 367
Query: 123 ----TPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQF 172
P S+ G P P E + S G S +G I+ +G +M YW+
Sbjct: 368 WEKRVPGSI--------GVPWPDTEAIIMSLETGDSLPPGEIGEIVVKGPQIMKGYWN-- 417
Query: 173 LAKPSVSTG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H
Sbjct: 418 --KPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHE 475
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ +V +G+ + E V A V L+E + SE DQ ++ K
Sbjct: 476 KVQEVVTIGVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KY 518
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRR----DEVRRE 322
L +K P+++ +R P T+ GKI R DE +R+
Sbjct: 519 LAAYKVPKVYE-FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|377565797|ref|ZP_09795077.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377527010|dbj|GAB40242.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 547
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 144/321 (44%), Gaps = 44/321 (13%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 72
P F+ ++AL AV + TSL VP + +A+LA L V+ S++ + G P
Sbjct: 261 PTFDPEAALRAVVDYRCTSLYGVPTMFIAELALLDHVEPGQYDLSSLRTGIMAGSPCPEH 320
Query: 73 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 132
+M++ + ++ YGMTETS ++ T D LE +
Sbjct: 321 VMRQVVDRMHMGEVSICYGMTETSP-VSCQTRVDDPLEL-------------------RV 360
Query: 133 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 186
VG+ PH+E+KV + G TRG VM YW++ + W+
Sbjct: 361 GTVGRVGPHLEIKVIDPITGETLPRGETGEFCTRGYSVMSGYWNEPEKTAEALDADGWMH 420
Query: 187 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 246
TGD+ +D + GR + GGEN+YP E+E L HP I+ V+G+ + R E
Sbjct: 421 TGDLAVMDPNSYARITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDERYGE 480
Query: 247 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 306
++A ++LR + D ++ + + ++ R K PR +V K F
Sbjct: 481 ELMAWIQLR------DGVADLTADDVREFATGKIARH----------KIPR-YVHVVKEF 523
Query: 307 PLTSTGKIRRDEVRREVMSHL 327
P+T TGK+R+ +R E + L
Sbjct: 524 PMTVTGKVRKVAMRAESVDLL 544
>gi|229198674|ref|ZP_04325375.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus m1293]
gi|228584833|gb|EEK42950.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus m1293]
Length = 563
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 532 -FRDELPKTTVGKILR 546
>gi|206558442|ref|YP_002229202.1| AMP-binding domain-containing [Burkholderia cenocepacia J2315]
gi|421866790|ref|ZP_16298453.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|444365685|ref|ZP_21165807.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
gi|198034479|emb|CAR50344.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
cenocepacia J2315]
gi|358073275|emb|CCE49331.1| Long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia H111]
gi|443605797|gb|ELT73621.1| AMP-binding enzyme [Burkholderia cenocepacia K56-2Valvano]
Length = 575
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 153/334 (45%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV + T+L VP + +A L + ++
Sbjct: 276 LACVSKGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS P +F
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETS-------------------PVSF 374
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ T + + + + VG+ PH+E+K+ V G + T+G VML YWD A
Sbjct: 375 QSSTDDPLEK-RTTTVGRIQPHLEVKIVDPSGDIVPVGATGELCTKGYSVMLGYWDDD-A 432
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
K + W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 433 KTREVLVDGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E + A + LR Q +E + +R C + + +K
Sbjct: 493 QVFGVPDAKYGEELCAWIVLRADEQMTEDD----------------VRAFCNGQ-IAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRDRMIEELK 568
>gi|392957410|ref|ZP_10322934.1| long-chain-fatty-acid--CoA ligase [Bacillus macauensis ZFHKF-1]
gi|391876817|gb|EIT85413.1| long-chain-fatty-acid--CoA ligase [Bacillus macauensis ZFHKF-1]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 142/319 (44%), Gaps = 50/319 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M + V +PKFE+K LE + + T P + +A L + S++ +
Sbjct: 272 IMTCSTLVILPKFEAKEVLETIHKKRPTLFPGAPTMY--IALLNHKDVSRYDLSSIQACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LPSE+ ++ S L+ YGMTETS P N+
Sbjct: 330 SGSASLPSEV-QQKFQSIISGSLVEGYGMTETS-------------------PVTHANLI 369
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPS 177
Q +G +G P P E + S VG +L +G VM YW+Q +
Sbjct: 370 HGK--QVKG-SIGIPWPDTEAGIYSSERGEFVAPGEVGELLVKGPQVMKGYWNQPEETAA 426
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + WL TGD+G +D+ G ++V R+ I +GG N+YP +VE VL +H I VV+
Sbjct: 427 VMQ-DGWLMTGDMGYMDEEGYFYIVDRKKDMIIAGGFNIYPRDVEEVLYEHEAIQEAVVL 485
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G+ + E V A + ++ +E E L +CR K+L +K PR
Sbjct: 486 GVPDPYRGETVKAYIVVKSGATVTE----------------EALNTYCR-KHLAAYKVPR 528
Query: 298 LFVLWRKPFPLTSTGKIRR 316
L+ +R+ P T GKI R
Sbjct: 529 LYE-FREELPKTMVGKILR 546
>gi|297189973|ref|ZP_06907371.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197718630|gb|EDY62538.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 515
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 53/328 (16%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SV 59
A ++G HVF+P FE + L+ +E+H T+ + VPA++ L RD S+
Sbjct: 220 AQSLIGGSHVFVPAFEPAAVLQVIEKHRPTATLLVPAMVQMLVD----HPDAGSRDLSSL 275
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ ++ G + L++ P+ L+ YGMTE + + + D G+L ++
Sbjct: 276 ETLVYGAAPISRALLERTHQVLPRTSLVQGYGMTEMAPCIAMLGADD---HNDGRLLRSA 332
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
G VE+++ + V G I+ RG +M YW +
Sbjct: 333 GRALAG----------------VEVRIVDREGAEVPQGTVGEIVARGEGMMQGYWKKPHE 376
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
G W+ TGD G +D G ++LV R I +G ENVY EVE + QHP +
Sbjct: 377 TAEALRGG-WMHTGDAGYLDADGYLFLVDRVKDMIVTGAENVYSTEVENAVAQHPSVAAC 435
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V+G+ +A+ E V A V LR C ++E +R H + + G+K
Sbjct: 436 AVIGVPDAQWGERVHAVVVLR-------PGCTA---------TAEEIRDHTKSL-IAGYK 478
Query: 295 APRL--FVLWRKPFPLTSTGKIRRDEVR 320
APR FV PL++ GK+ + E+R
Sbjct: 479 APRSCEFV---DELPLSAAGKVLKRELR 503
>gi|393764545|ref|ZP_10353150.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
gi|392729910|gb|EIZ87170.1| AMP-binding domain-containing protein, partial [Methylobacterium
sp. GXF4]
Length = 413
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 46/333 (13%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A L G+ V+ + F+ + LE V+ T+L VP + +A L ++
Sbjct: 112 LAALTHGSAMVYPGEGFDPHATLETVQAEGCTALYGVPTMF--IAELDHPDFARFDLGTL 169
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P ++M+ ++ AYGMTETS ++F + D LE
Sbjct: 170 RTGVMAGAPCPIQVMRRVVERMHMREITIAYGMTETSP-VSFQSAVDDPLER-------- 220
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ PH+E+K+ + V G + TRG VML YWD
Sbjct: 221 -----------RVATVGRVHPHLEVKIVNAEGRVVPRGEPGELCTRGYSVMLGYWDDPAK 269
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I +
Sbjct: 270 SDEVIDAAGWMHTGDLATLDADGYCNIVGRLKDMVIRGGENLYPREIEEYLYRHPKIQDV 329
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+++ + E + A +R+R+ SE +R CR + + K
Sbjct: 330 QVFGVSDPKYGEELCAWIRVRDGETVSEDE----------------VRAFCRGQ-IAHQK 372
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
PR ++ + + FP+T TGK+++ +R V L
Sbjct: 373 IPR-YIHFVESFPMTVTGKVQKFRMRHIVEDQL 404
>gi|387874232|ref|YP_006304536.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
gi|386787690|gb|AFJ33809.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
Length = 467
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 141/317 (44%), Gaps = 50/317 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ GA + + F+ + +E +++ +T L P + L + K +++ +
Sbjct: 201 FLRGATMLPVAVFDIDTVVELIDRERITMLPGPPTLYHSLLGVGDKSKL----STLRAAV 256
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P EL++ P L++ YG+TE + TL PG +F +V
Sbjct: 257 TGAADIPVELVRRIHGELPFETLMTGYGLTEAGNV---------TLSRPGD---SFEDVA 304
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
+ G P VE+++ DG ++ RG VM Y D A E
Sbjct: 305 TTA---------GLPCDGVEVRIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEG 350
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+GS DD G + +VGR+ GG N YP E+E LL HP + V+GI + R
Sbjct: 351 WLHTGDLGSFDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDER 410
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
+ ++ A V + +S++ L CR++ + GFK PR V +
Sbjct: 411 MGQVGKAFVVRKGE------------------VSADELIGWCRDR-MAGFKVPRA-VQFL 450
Query: 304 KPFPLTSTGKIRRDEVR 320
PL +TGK+ +D++R
Sbjct: 451 DSLPLNATGKVMKDQLR 467
>gi|398934088|ref|ZP_10666138.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
gi|398159328|gb|EJM47633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM48]
Length = 565
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLSTVADEKATALYGVPTMF--IAMLDQPQRAGFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPADDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|49481470|ref|YP_038577.1| long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49333026|gb|AAT63672.1| long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase)
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 563
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKQY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 532 -FRDELPKTTVGKILR 546
>gi|229169251|ref|ZP_04296964.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH621]
gi|228614234|gb|EEK71346.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH621]
Length = 576
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 70/337 (20%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 285 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 342
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV- 122
+G LP E+ +E KL+ YG+TE+S P GN
Sbjct: 343 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESS-------------------PVTHGNFL 382
Query: 123 ----TPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQF 172
P S+ G P P E + S G S +G I+ +G +M YW+
Sbjct: 383 WEKRVPGSI--------GVPWPDTEAIIMSLETGDSLPPGEIGEIVVKGPQIMKGYWN-- 432
Query: 173 LAKPSVSTG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H
Sbjct: 433 --KPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHE 490
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ +V +G+ + E V A V L+E + SE DQ ++ K
Sbjct: 491 KVQEVVTIGVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KY 533
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRR----DEVRRE 322
L +K P+++ +R P T+ GKI R DE +R+
Sbjct: 534 LAAYKVPKVYE-FRSELPKTTVGKILRRVLIDEEKRK 569
>gi|423373523|ref|ZP_17350862.1| hypothetical protein IC5_02578 [Bacillus cereus AND1407]
gi|401095988|gb|EJQ04038.1| hypothetical protein IC5_02578 [Bacillus cereus AND1407]
Length = 561
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 530 -FRDELPKTTVGKILR 544
>gi|407698020|ref|YP_006822808.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255358|gb|AFT72465.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 517
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 48/319 (15%)
Query: 10 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 69
HV +P+FE + + A+++ V VP +M A L + S++ ++ G +
Sbjct: 227 HVIVPRFEEVAVMSAIQRERVVETFLVPTMMR--AVLAHPRFPEFDLSSLRCMMYGASPI 284
Query: 70 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 129
S L+K+A ++P+A + YGMTE S + + Y + +
Sbjct: 285 DSTLLKKAMTAWPEASFLQLYGMTELSPVVCILPDY----------------CHSDDAYA 328
Query: 130 PQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV- 183
+ + G PA E++V + VG I+ RG VM YW+ KP + +
Sbjct: 329 DKLMAAGLPAHMAEVRVVDSEDNEVPRGQVGEIVARGPMVMQGYWN----KPEQTEEALR 384
Query: 184 --WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 241
W+ TGD G +DD G ++LV R + +GGENVY EVE LL+ P I V+G+ +
Sbjct: 385 QGWMHTGDAGYMDDAGYIFLVDRIKDMVVTGGENVYSVEVEDALLRMPAIAQCAVIGVPD 444
Query: 242 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 301
+ E V A + L + +E++ + HC+ + +K PR F L
Sbjct: 445 EKWGERVHAVIVLAAGAEVAEAD----------------IVAHCKTL-IANYKCPRSFEL 487
Query: 302 WRKPFPLTSTGKIRRDEVR 320
+ PL+ GKI + +++
Sbjct: 488 VDQ-MPLSGAGKILKYKLK 505
>gi|423573797|ref|ZP_17549916.1| hypothetical protein II9_01018 [Bacillus cereus MSX-D12]
gi|401212366|gb|EJR19109.1| hypothetical protein II9_01018 [Bacillus cereus MSX-D12]
Length = 561
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 530 -FRDELPKTTVGKILR 544
>gi|344924690|ref|ZP_08778151.1| long-chain-fatty-acid--CoA ligase [Candidatus Odyssella
thessalonicensis L13]
Length = 531
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 152/326 (46%), Gaps = 53/326 (16%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
+ P+F A++A+++H +T VP + +A RVK+ +S+K L+GG LP
Sbjct: 250 MMFPRFNPLDAMKAIQKHRITFFPGVPTMYNMIANHPRVKEM--DLNSLKICLSGGAPLP 307
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
++ KE S KL+ AYG++ETS + T N V+
Sbjct: 308 IKV-KEDFESLTGCKLVEAYGLSETSPA-----------------------ATSNPVYGI 343
Query: 131 QGV-CVGKPAPHVELKVCS-DGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 182
+ +G P P ++K+ S D + G+I +G VML YW++ V G+
Sbjct: 344 NKIGSIGIPFPGTQIKILSLDNPAKEMKIRENGQIAIKGPQVMLGYWNRSDETEKVFVGD 403
Query: 183 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 242
L TGD+G +D+ G +LV R I G NVYP VE V+ +H + + V+GI +
Sbjct: 404 FLL-TGDVGYMDEDGYTFLVDRIKDLIICSGFNVYPRMVEEVIYRHHSVAEVTVIGIPDE 462
Query: 243 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 302
+ E V A V+L+E + SE E LL + + L+ + P+ F+ +
Sbjct: 463 KRGETVKAFVKLKEGAELSE----------EQLL-------NFLQGKLSPIEMPK-FIEF 504
Query: 303 RKPFPLTSTGKIRRDEVRREVMSHLK 328
R P T GK+ + E++ E S K
Sbjct: 505 RDELPKTMIGKLSKKELKAEERSKQK 530
>gi|423411695|ref|ZP_17388815.1| hypothetical protein IE1_00999 [Bacillus cereus BAG3O-2]
gi|423432519|ref|ZP_17409523.1| hypothetical protein IE7_04335 [Bacillus cereus BAG4O-1]
gi|401104561|gb|EJQ12534.1| hypothetical protein IE1_00999 [Bacillus cereus BAG3O-2]
gi|401116126|gb|EJQ23969.1| hypothetical protein IE7_04335 [Bacillus cereus BAG4O-1]
Length = 561
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|229492698|ref|ZP_04386499.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|229320357|gb|EEN86177.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 542
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 48/323 (14%)
Query: 7 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
GAC V P F+ + L A TSL VP + +A L S++
Sbjct: 254 GACVVIPSPAFDPVATLRACADERCTSLYGVPTMF--IAILNVTGFESYDLSSLRTGAMA 311
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
G P E+MK+ T P+ + AYGMTETS + + + DP
Sbjct: 312 GSPCPVEIMKQVTRWVPEVAI--AYGMTETSPASSQTWVDDPVSR--------------- 354
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 179
+ VG+ PHVE+K+ + G + RG VML YW++
Sbjct: 355 -----RISTVGRAHPHVEMKISDPVTGDTTERGQSGELCIRGYSVMLGYWNEPEKTAGAI 409
Query: 180 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 239
+ W+ +GD+ +D+ G V + GR + GGEN+YP E+E L HP I+ +VG+
Sbjct: 410 DADGWIHSGDLAMMDEDGFVEITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQIVGV 469
Query: 240 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 299
+ + E ++ +RLRE + ++ +R C K L +K PR +
Sbjct: 470 PDDKYGEELMVWLRLREGAH---------------PIDADGIRAFCTGK-LAHYKIPR-Y 512
Query: 300 VLWRKPFPLTSTGKIRRDEVRRE 322
V +P+T +GK+R+ E+R +
Sbjct: 513 VHCVDEYPMTVSGKVRKVEMREQ 535
>gi|229062208|ref|ZP_04199531.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH603]
gi|228717102|gb|EEL68780.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH603]
Length = 576
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 285 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 342
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 343 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 395
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 396 PDTEAIIMSLETGESLP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 441
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 442 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 501
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE DQ ++ K L +K P+++
Sbjct: 502 DPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KYLAAYKVPKVYE 544
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 545 -FRSELPKTTVGKILRRVLIDEEKRK 569
>gi|365158696|ref|ZP_09354888.1| hypothetical protein HMPREF1014_00351 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626569|gb|EHL77552.1| hypothetical protein HMPREF1014_00351 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 577
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 546 -FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|404492852|ref|YP_006716958.1| acyl-CoA synthetase [Pelobacter carbinolicus DSM 2380]
gi|77544928|gb|ABA88490.1| acyl-CoA synthetase, AMP-forming [Pelobacter carbinolicus DSM 2380]
Length = 572
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 147/340 (43%), Gaps = 57/340 (16%)
Query: 1 MAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 58
+ + VGAC V +P+ F+ + L+A+E T+L VP + L+ + ++ S
Sbjct: 274 LVCMAVGAC-VVLPQEYFDPLATLQAIEAEACTTLYGVPTMF--LSQVEHPQRDSFDLTS 330
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQL 115
++ + GG P L++ + +++ YGMTE S DP LET
Sbjct: 331 LRTGIMGGAPCPPALVRRVMDELHCPEILIGYGMTEASPLTHLTAPEDPLPIRLET---- 386
Query: 116 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW 169
VG+ PH E+K+ S VG + RG HV Y+
Sbjct: 387 -------------------VGRNLPHQEVKLIDPDSGATVAMGEVGEVCFRGYHVAKGYY 427
Query: 170 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
A + WL +GD+G++D G V + GRR I GGEN+ P ++E LLQHP
Sbjct: 428 GDPEATALGIDADGWLHSGDLGTMDGDGYVKITGRRKEIIIRGGENICPWQIEQHLLQHP 487
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ + V G+ + E ++A VRL Q E E LR C+
Sbjct: 488 KVAEVAVFGLPDEFYGEQIMAWVRLESGQQADE----------------EELRDFCK-AG 530
Query: 290 LTGFKAPRLFVLW-RKPFPLTSTGKIRRDEVRREVMSHLK 328
L FK PR LW FP T +GK+ + ++R + LK
Sbjct: 531 LAHFKVPRY--LWIVDEFPKTGSGKLHKPQMRELSLQRLK 568
>gi|424046952|ref|ZP_17784513.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408884589|gb|EKM23325.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 521
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 157/326 (48%), Gaps = 49/326 (15%)
Query: 2 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 61
A ++ G+ V IP+FE K +E + QH V+ VP + +A L +++ + + VK
Sbjct: 226 ASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKH 283
Query: 62 IL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 117
L +GG LP E++++ + F + ++ YG++ET+ TF +
Sbjct: 284 SLRLGVSGGASLPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHID------------ 330
Query: 118 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 177
G+ P SV QP V K A ++K + +G + + VM Y +P
Sbjct: 331 --GDRLPGSVGQPLCGYVIKIA---DVKGHARPIGELGEVCIKSPSVMKGYH----GRPE 381
Query: 178 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + W TGDIG +D+ GN+++V R I GG NVYP E+E VL+ P + +
Sbjct: 382 ATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCQPDVEMV 441
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
VVG + RL E V A V L + +++C S + L CRE+ L +K
Sbjct: 442 AVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTLIAWCREQ-LADYK 484
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V RK P+T+TGKI + E+
Sbjct: 485 YPRR-VFIRKALPMTATGKILKRELH 509
>gi|423489687|ref|ZP_17466369.1| hypothetical protein IEU_04310 [Bacillus cereus BtB2-4]
gi|423495410|ref|ZP_17472054.1| hypothetical protein IEW_04308 [Bacillus cereus CER057]
gi|423497794|ref|ZP_17474411.1| hypothetical protein IEY_01021 [Bacillus cereus CER074]
gi|401150682|gb|EJQ58138.1| hypothetical protein IEW_04308 [Bacillus cereus CER057]
gi|401162274|gb|EJQ69632.1| hypothetical protein IEY_01021 [Bacillus cereus CER074]
gi|402431312|gb|EJV63381.1| hypothetical protein IEU_04310 [Bacillus cereus BtB2-4]
Length = 561
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 147/337 (43%), Gaps = 70/337 (20%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIQACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV- 122
+G LP E+ +E KL+ YG+TE+S P GN
Sbjct: 328 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESS-------------------PVTHGNFL 367
Query: 123 ----TPNSVHQPQGVCVGKPAPHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQF 172
P S+ G P P E + S G S +G I+ +G +M YW+
Sbjct: 368 WEKRVPGSI--------GVPWPDTEAIIMSLETGDSLPPGEIGEIVVKGPQIMKGYWN-- 417
Query: 173 LAKPSVSTG---EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 229
KP + + WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H
Sbjct: 418 --KPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHE 475
Query: 230 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 289
+ +V +G+ + E V A V L+E + SE DQ ++ K
Sbjct: 476 KVQEVVTIGVPDPYRGETVKAFVVLKEGAECSEEELDQFAR-----------------KY 518
Query: 290 LTGFKAPRLFVLWRKPFPLTSTGKIRR----DEVRRE 322
L +K P+++ +R P T+ GKI R DE +R+
Sbjct: 519 LAAYKVPKVYE-FRSELPKTTVGKILRRVLIDEEKRK 554
>gi|228917163|ref|ZP_04080721.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228842581|gb|EEM87671.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 563
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 532 -FRDELPKTTVGKILR 546
>gi|229032170|ref|ZP_04188146.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH1271]
gi|228729176|gb|EEL80176.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus AH1271]
Length = 582
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 291 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIEACI 348
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 349 SGSAPLPVEV-QEEFERVTGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGVPW 401
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 402 PDTEANIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 447
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +GI
Sbjct: 448 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGIP 507
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 508 DPYRGETVKAFVVLKEGAECSEEELNQFAR-----------------KYLAAYKVPKVYE 550
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 551 -FRDELPKTTVGKILRRVLIDEEKRK 575
>gi|118465694|ref|YP_881765.1| feruloyl-CoA synthetase [Mycobacterium avium 104]
gi|118166981|gb|ABK67878.1| feruloyl-CoA synthetase [Mycobacterium avium 104]
Length = 495
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 43/333 (12%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
++ L G V++ +F+ + V VT+ VP +++ + ++ + +++
Sbjct: 195 LSNLYAGRAIVYLRRFDPHEWVRLVRDERVTTATVVPTMLSRIVAVLEEQSAEL--PTLR 252
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
GG + L++ A + P+ ++AYG+TETSS++ +T D L +
Sbjct: 253 NFAYGGSKVARPLVRRALDLLPQVGFVNAYGLTETSSTIAVLTPEDHRLAHEARDDAVAR 312
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAK 175
+T VG+P P +E+++ ++ G G + RG V RY +
Sbjct: 313 RLT----------SVGRPVPGIEVQIRAEDGTVLGPGETGELFVRGPQVSGRYTE----I 358
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
SV W T D+ +D+ G +++ GR + I GGEN+ P EVE VL++HP + +V
Sbjct: 359 GSVLDDHGWFATRDVAMLDEDGYLFIGGRSDDTIIRGGENIAPSEVEDVLIEHPDVREVV 418
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVG+ +A + +VA + ES + E LR+ R K L G +
Sbjct: 419 VVGLDDAEWGQAIVAVI-------VPESGTAP---------APERLREFARSK-LRGSRT 461
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P V +R P T TGK+ +RRE++ LK
Sbjct: 462 PDRIV-FRDELPTTPTGKV----LRREILEDLK 489
>gi|440695433|ref|ZP_20877973.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
gi|440282491|gb|ELP69938.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
Length = 527
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 45/325 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A M G V +P F+ ALE +E+ V+ L+ P I DL + ++ S++
Sbjct: 236 LASFMHGVTVVPMPVFQPGKALEIIERERVSVLLGPPTIFHDL--INHPDRSGHDLSSLR 293
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ GG +P L++ + ++SAYG+TE+S+ +T + D + ET +
Sbjct: 294 VSMTGGTTIPQALIRAMKSELSFDIVMSAYGLTESSALVTTTRIGD-SEETVAR------ 346
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 175
G+ P VE+++ + V G IL RG +V YW++ A
Sbjct: 347 -------------TTGRVIPDVEVRIVDEEGREVAAEQDGEILVRGYNVTRGYWEEPEAT 393
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
+ + WL TGDIG +D GN+ +V R+ GG N YP E+E +LL H I +
Sbjct: 394 AATIDAQGWLHTGDIGRLDAAGNLSIVDRKKEMYIVGGFNAYPAEIEKLLLAHESIGQVA 453
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
V+G+ + RL E+ A V R+ + SE KE++ E R+H + FK
Sbjct: 454 VIGVPDERLGEVGCAFVVPRQGHEVSE---------KEVV---EWSREH-----MANFKV 496
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR L + P ++ K+ +DE+R
Sbjct: 497 PRHVRLVGQ-LPRNASQKVLKDELR 520
>gi|229158133|ref|ZP_04286202.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 4342]
gi|228625362|gb|EEK82120.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 4342]
Length = 577
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 546 -FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|426408677|ref|YP_007028776.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
gi|426266894|gb|AFY18971.1| long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase)
[Pseudomonas sp. UW4]
Length = 565
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLGTVADEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELR 561
>gi|423549736|ref|ZP_17526063.1| hypothetical protein IGW_00367 [Bacillus cereus ISP3191]
gi|401190324|gb|EJQ97369.1| hypothetical protein IGW_00367 [Bacillus cereus ISP3191]
Length = 561
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 183
P++ + G+ P +G I+ +G +M YW+ KP + +
Sbjct: 381 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 184 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 530 -FRDELPKTTVGKILR 544
>gi|328950899|ref|YP_004368234.1| long-chain-fatty-acid--CoA ligase [Marinithermus hydrothermalis DSM
14884]
gi|328451223|gb|AEB12124.1| Long-chain-fatty-acid--CoA ligase [Marinithermus hydrothermalis DSM
14884]
Length = 559
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 150/321 (46%), Gaps = 57/321 (17%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +GA V +P+FE K +EA+E+H VT VP + + +++ + D++K
Sbjct: 269 IALGAKLVLLPRFEVKEVVEALEKHKVTLFPGVPTLYVAVNNFPGIEQ--RKVDTLKVCN 326
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+++E AK+ YG+TE S P +
Sbjct: 327 SGAAPLPVEVLEEFEKRT-GAKIAEGYGLTEAS----------PVTHS------------ 363
Query: 124 PNSVH--QPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKP 176
N VH + +G +G P P V+ +V DG +G + +G ++M YW+ +P
Sbjct: 364 -NPVHGTRKKG-SIGVPLPSVDAQVLGPDGQPLPPGQIGELAVKGPNIMKGYWN----RP 417
Query: 177 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ + WL TGD+ +D+ G ++V R+ I +GG N+YP EVE VL HP +
Sbjct: 418 EETQQALKNGWLLTGDMARMDEDGYFYIVDRKKDLIIAGGYNIYPREVEEVLYAHPAVKE 477
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V+G+ + E V A V L++ ++ + D L QHCR +L +
Sbjct: 478 AAVIGVPDPYRGETVKAYVVLKDEYRGKITQAD--------------LEQHCR-AHLAAY 522
Query: 294 KAPRLFVLWRKPFPLTSTGKI 314
K P+ + ++ P T+ GKI
Sbjct: 523 KVPKQWA-FKTELPKTAVGKI 542
>gi|108760532|ref|YP_629825.1| AMP-binding protein [Myxococcus xanthus DK 1622]
gi|108464412|gb|ABF89597.1| AMP-binding enzyme [Myxococcus xanthus DK 1622]
Length = 552
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 140/311 (45%), Gaps = 46/311 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ + L+ V+ TSL VP + +A L + +++ + G P E+MK
Sbjct: 264 FDPLTVLQTVQAERCTSLYGVPTMF--IAELDHPRFGEFDLSTLRTGVMAGSPCPVEVMK 321
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + ++ YGMTETS T L +P + V
Sbjct: 322 QVQSRMHMREVTICYGMTETSPVSTQSALDEPL--------------------DKRVSTV 361
Query: 136 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 189
G+ PH+E+KV GS V G + TRG VML YW A + W+ TGD
Sbjct: 362 GRVHPHLEVKVIDAGSGEVVPRGSPGELCTRGYSVMLGYWANPEATAAAVDAAGWMHTGD 421
Query: 190 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 249
+ +DD G V +VGR I GGEN+ P EVE L HPG+ V+G+ + R E V+
Sbjct: 422 LAVMDDEGYVKVVGRIKDTIIRGGENISPREVEEFLHAHPGVSETQVIGVPSKRYGEEVM 481
Query: 250 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 309
A VR++ L++E L + C + + FK PR F + FP+T
Sbjct: 482 AWVRVKPG----------------ATLTAEELTRFCAGR-IASFKIPRYF-KFVDAFPMT 523
Query: 310 STGKIRRDEVR 320
TGK+++ ++R
Sbjct: 524 VTGKVQKFKMR 534
>gi|357407978|ref|YP_004919901.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386353031|ref|YP_006051278.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337762927|emb|CCB71635.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365811110|gb|AEW99325.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 532
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 141/327 (43%), Gaps = 47/327 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+ +GA V +P + + L AVE+ T L P + +A L + S++K
Sbjct: 243 VYLGATSVVLPGPDPVAILRAVERERATKLFCPPTVW--VALLRSPEFDRHDLSSLRKGY 300
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P E++ E P+ L + YG TE S T + PG+
Sbjct: 301 YGASAMPREVLAELRRRLPEMGLTNFYGQTEMSPVATVLR--------PGE--------- 343
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 178
H + G+P +VE +V D V G I+ R ML YW+
Sbjct: 344 ----HAARPGSAGRPVLNVETRVVDDAGRPVAPGVTGEIVHRSPQAMLGYWNDPRRTAEA 399
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G W +GD+G +DD G +++V R+ IK+GGENV EVE VL +HPG+ V G
Sbjct: 400 FRGG-WFHSGDLGFLDDEGFLYVVDRKKDMIKTGGENVSGREVEEVLHRHPGVAEAAVFG 458
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
IA+ E V A V R+ + + E L HCR +L GFK P+
Sbjct: 459 IAHPYWVEAVTAAVVPRDG----------------VRPTPEELIAHCR-AHLAGFKVPK- 500
Query: 299 FVLWRKPFPLTSTGKIRRDEVRREVMS 325
+V+ P +GKI + +R E S
Sbjct: 501 YVVVTGTLPKNPSGKILKRRLREEYAS 527
>gi|228935835|ref|ZP_04098647.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229093621|ref|ZP_04224722.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-42]
gi|229124089|ref|ZP_04253281.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus 95/8201]
gi|229186758|ref|ZP_04313916.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BGSC 6E1]
gi|228596771|gb|EEK54433.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus BGSC 6E1]
gi|228659391|gb|EEL15039.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus 95/8201]
gi|228689830|gb|EEL43636.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus Rock3-42]
gi|228823892|gb|EEM69712.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 577
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 546 -FRDELPKTTVGKILR 560
>gi|206969857|ref|ZP_03230811.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH1134]
gi|206735545|gb|EDZ52713.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH1134]
Length = 561
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 270 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 327
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 328 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 380
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 381 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 426
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 427 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 486
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 487 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 529
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 530 -FRDELPKTTVGKILRRVLIDEEKRK 554
>gi|228987775|ref|ZP_04147886.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772049|gb|EEM20504.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 577
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 286 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 343
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 344 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 396
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 397 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 442
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 443 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 502
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 503 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 545
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 546 -FRDELPKTTVGKILRRVLIDEEKRK 570
>gi|52140978|ref|YP_085852.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus E33L]
gi|51974447|gb|AAU15997.1| long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase)
[Bacillus cereus E33L]
Length = 563
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 532 -FRDELPKTTVGKILR 546
>gi|410456905|ref|ZP_11310753.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409926992|gb|EKN64141.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 516
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 148/331 (44%), Gaps = 51/331 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKK 61
L VG V P F L + ++ +T + VP + LI + T D S++
Sbjct: 228 LYVGMTGVLSPSFNPSETLRYISKYQITFMGGVPTMFR----LIFQQCTIADYDVNSLRL 283
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
+ GG +L+ NSFP A +++++GMTETS TF + D
Sbjct: 284 VFLGGEPSSPQLIHRIKNSFPNASVVASWGMTETSGYFTFSGIEDEV------------- 330
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKP 176
N V Q +G KP P +KV DG+ + VG + RG V+ Y D+
Sbjct: 331 ---NLVAQTEG----KPGPENLMKVMRPDGTRADTNEVGELYVRGDSVISSYLDKEHNLD 383
Query: 177 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 236
+ G WL TGD+G +D+ + VGR+ SGG NVYP EVE+ L +PGI +
Sbjct: 384 AFVDG--WLKTGDLGYLDENHYLHFVGRQKEMFISGGYNVYPLEVESYLNSYPGINASCL 441
Query: 237 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 296
+ +A+ E+ VA + + L+ E + HCR+ L +K P
Sbjct: 442 IEVADDIWGEVGVAFIVPEDGAA----------------LNVEEIVNHCRQ-GLANYKIP 484
Query: 297 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 327
+ F + R P T GKI + E+R+ + + +
Sbjct: 485 KKFFI-RTNLPKTLVGKIAKQEIRKSLETFM 514
>gi|320034373|gb|EFW16318.1| AMP-binding enzyme [Coccidioides posadasii str. Silveira]
Length = 537
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 51/343 (14%)
Query: 1 MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMAD-LATLIRVKKTWKGRDS 58
MA G+ VF F + + L+AV++ T+L VP + + L L ++G
Sbjct: 215 MATATHGSAIVFPAESFNAVATLKAVQEEKCTALYGVPTMFVEELELLANGTIPYEGFQY 274
Query: 59 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 118
++ + G +P+ELMK+ + +L YGMTETS T DP
Sbjct: 275 LRTGIAAGSSIPAELMKKLHKTLNLTELTICYGMTETSPVSCMTTTDDPI---------- 324
Query: 119 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV--------GRILTRGAHVMLRYWD 170
+ VG+ PHVE KV D H G + G VM YW+
Sbjct: 325 ----------DKRINTVGRLMPHVEAKVV-DPVDHSRILPVGSKGELAVSGYLVMKEYWN 373
Query: 171 Q----FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 226
A + G++W+ TGD S+ G V + GR I GGEN++P E+E L
Sbjct: 374 APEQTAAAMRADDEGKIWMHTGDEASMSPDGYVTITGRIKDLIIRGGENIHPLEIENCLF 433
Query: 227 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 286
HPG++ + VVG+ + R E+V A V RE N E ++ + ++ R
Sbjct: 434 AHPGVLNVSVVGVPDQRYGEVVAAFVVARE--------------NGEKRVTPDDIKSWVR 479
Query: 287 EKNLTGFKAPRL-FVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K L+ P+ F + FP T++GKI++ +R + L+
Sbjct: 480 SK-LSNHLVPKFVFYINETEFPKTASGKIQKFALRERAIKLLR 521
>gi|433543487|ref|ZP_20499892.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
gi|432185161|gb|ELK42657.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
Length = 566
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 144/321 (44%), Gaps = 38/321 (11%)
Query: 6 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 65
+ A + +PKFE K E +++ T P + L +K S++ ++G
Sbjct: 274 IAAEIILVPKFEVKQIFEMIDKRKPTLFPGAPTMYIALINHPDLKN--HDLSSIEACVSG 331
Query: 66 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 125
LP E+ K KL+ YG+TE S +T +P E + + G P+
Sbjct: 332 SAPLPVEV-KVKFEELTGGKLVEGYGLTEASP----VTHSNPIWEK--SITGSIGMPWPD 384
Query: 126 SVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 185
+ + G+ P E VG + +G VML YW++ +V + WL
Sbjct: 385 TDCRILDTVTGEELPQGE----------VGELAVKGPQVMLGYWNRPEETAAV-LKDGWL 433
Query: 186 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 245
TGD+G +D+ G ++V R+ I +GG N+YP EVE VL +HP I V+G+ +
Sbjct: 434 LTGDVGYMDENGYFYIVDRKKDMIIAGGFNIYPREVEEVLFEHPSIQEAAVIGVPDPYRG 493
Query: 246 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 305
E V A + ++ Q SE E L HCR+K L +K PR + +R
Sbjct: 494 ETVKAFIVFKDGKQASE----------------EELEAHCRKK-LAAYKIPRKYE-FRTE 535
Query: 306 FPLTSTGKIRRDEVRREVMSH 326
P T GK+ R +++ E +H
Sbjct: 536 LPKTMVGKVLRRQLQEEDKAH 556
>gi|118467988|ref|YP_889882.1| AMP-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|399989884|ref|YP_006570234.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
gi|118169275|gb|ABK70171.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
gi|399234446|gb|AFP41939.1| Fatty-acid-CoA ligase FadD35 [Mycobacterium smegmatis str. MC2 155]
Length = 537
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 137/320 (42%), Gaps = 45/320 (14%)
Query: 14 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 73
P F+ L AVE T L VP + +A L S++ + G P E+
Sbjct: 253 PGFDPGITLSAVESEKCTGLYGVPTMF--IAMLGHPDFANFDLSSLRTGIMAGSVCPIEV 310
Query: 74 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 133
MK A++ YGMTETS ++ TL D L+ +
Sbjct: 311 MKRVVADMHMAEVAICYGMTETSP-VSCQTLIDDDLDR-------------------RTA 350
Query: 134 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 187
+G+ PHVE+K+ + G TRG VML YW+ + W+ T
Sbjct: 351 TIGRAHPHVEIKIIDPDTGETVERGQPGEFCTRGYSVMLGYWNDDEKTREAVDADGWMHT 410
Query: 188 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 247
GD+ + + G +VGR + GGEN+YP E+E L HP I V+G+ + R E
Sbjct: 411 GDLAVMREDGYCTIVGRIKDMVIRGGENIYPREIEEFLYTHPDIDDAQVIGVPDERYGEE 470
Query: 248 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 307
+ A +R+ K L ++ +R+ K L +K PR +V FP
Sbjct: 471 ICAWIRM---------------KPGRPPLDADKVREFASGK-LAHYKIPR-YVHVVDEFP 513
Query: 308 LTSTGKIRRDEVRREVMSHL 327
+T TGKIR+ ++R E ++ L
Sbjct: 514 MTVTGKIRKVQMREETVALL 533
>gi|27378059|ref|NP_769588.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27351205|dbj|BAC48213.1| bll2948 [Bradyrhizobium japonicum USDA 110]
Length = 525
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 144/322 (44%), Gaps = 44/322 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
L GA V +F+ L+ EQ +T L VPA M + R K R +K +L
Sbjct: 231 LYHGARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAKTVDFSR--LKYML 288
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 289 YGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA----- 341
Query: 124 PNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSV 178
GK P VE+ + +DG VG I TR M YW+ A S
Sbjct: 342 ------------GKALPGVEIAILDADGKPLPPRQVGEIATRSGSNMAGYWNLPEATAST 389
Query: 179 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
G+ WL TGD G +D+ G +++ R I SGGENVYP EVE+ L HP + V+G
Sbjct: 390 LRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENVYPAEVESALCDHPDVAEAAVIG 449
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + + E V A V ++ Q + ++ + RE+ + GFK P+
Sbjct: 450 VPDDKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGFKTPKS 492
Query: 299 FVLWRKPFPLTSTGKIRRDEVR 320
V + P +GKI R ++R
Sbjct: 493 -VEFLPTLPRNPSGKILRRQLR 513
>gi|410459251|ref|ZP_11313003.1| acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
gi|409930444|gb|EKN67443.1| acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
Length = 563
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 49/313 (15%)
Query: 11 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 70
+ +P+F+ + L+ +E T P I +A L S+ ++G LP
Sbjct: 282 ILLPRFDVEDTLKTIENQKPTIFPGAPTIF--IALLNHPDIVDYDLSSIDSCISGSAPLP 339
Query: 71 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 130
E+ +E+ KL+ YG+TE S L+D G
Sbjct: 340 IEV-QESFEEITGGKLVEGYGLTEASPVTHANFLWDIRPRVKG----------------- 381
Query: 131 QGVCVGKPAPHVELKVCS---DGSSH---VGRILTRGAHVMLRYWDQF-LAKPSVSTGEV 183
+G P P E + S +G + +G I+ RG VM YW+Q S GE
Sbjct: 382 ---SIGVPWPDTEAFILSLEKNGPAEPNEIGEIVIRGPQVMKGYWNQDDETAASFFEGE- 437
Query: 184 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 243
WL TGD+G +D+ G ++V R+ I +GG N+YP E+E VL +H I VVVGI +
Sbjct: 438 WLLTGDLGYMDEQGYFYIVDRKKDMIIAGGFNIYPREIEEVLYEHESIKETVVVGIPDPY 497
Query: 244 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 303
E V A V L+++ +E E L +HCRE L +K P++F +R
Sbjct: 498 RGETVKAYVVLKDNESVTE----------------EQLERHCRE-YLAAYKVPKIFE-FR 539
Query: 304 KPFPLTSTGKIRR 316
K P T+ GKI R
Sbjct: 540 KELPKTAVGKIVR 552
>gi|228999309|ref|ZP_04158889.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides Rock3-17]
gi|229006864|ref|ZP_04164497.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides Rock1-4]
gi|228754486|gb|EEM03898.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides Rock1-4]
gi|228760506|gb|EEM09472.1| Long-chain-fatty-acid--CoA ligase [Bacillus mycoides Rock3-17]
Length = 563
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 144/318 (45%), Gaps = 48/318 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDSVKK 61
+M G V IPKF+ K EA+++H VT P I L + L+R S++
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLREYDI----SSIRA 327
Query: 62 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 121
++G LP E+ +E KL+ YG+TE+S L++ ++P + G
Sbjct: 328 CISGSAPLPVEV-QEKFEKITGGKLVEGYGLTESSPVTHGNFLWE------KRVPGSIGV 380
Query: 122 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 181
P++ + + G+ P +G I+ +G VM YW+ KP +
Sbjct: 381 PWPDTDARIMSLETGEYLP----------PGEIGEIVVKGPQVMKGYWN----KPEETAA 426
Query: 182 EV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 238
+ WL TGDIG +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G
Sbjct: 427 VLQDGWLHTGDIGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIG 486
Query: 239 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 298
+ + E V A V L+E SE DQ ++ K L +K P++
Sbjct: 487 VPDPYRGETVKAFVVLKEGEVCSEEELDQFAR-----------------KYLAAYKVPKV 529
Query: 299 FVLWRKPFPLTSTGKIRR 316
+ +R P T+ GKI R
Sbjct: 530 YE-FRSELPKTTVGKILR 546
>gi|398959911|ref|ZP_10678305.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398144648|gb|EJM33470.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 564
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 143/318 (44%), Gaps = 45/318 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F+ L V T+L VP + +A L + ++ S++ + G P E+M+
Sbjct: 284 FDPLLTLGTVADEKATALYGVPTMF--IAMLDQPQRAEFDLSSLRTGIMAGATCPIEVMR 341
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ +++ AYGMTETS +L+T P+ + + V
Sbjct: 342 RVISEMHMSEVQIAYGMTETSPV---------SLQT-----------GPSDDLELRVTTV 381
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G+ P +E K+ + + V G + TRG VML YW+ W+ TGD+
Sbjct: 382 GRTQPQLESKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPEGTAEAIDQAGWMHTGDL 441
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
S++D G V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 442 ASMNDEGYVCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA 501
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
W + + S+ +E L+ C+E+ + FK PR F + FP+T
Sbjct: 502 ---------WIKFHPGHSATEQE-------LQAWCKER-IAHFKTPRYFKFVEE-FPMTV 543
Query: 311 TGKIRRDEVRREVMSHLK 328
TGKI++ +R + L+
Sbjct: 544 TGKIQKFRMREISIEELQ 561
>gi|228948248|ref|ZP_04110532.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228811606|gb|EEM57943.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 582
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 291 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 348
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 349 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 401
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 402 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 447
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 448 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 507
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 508 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 550
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 551 -FRDELPKTTVGKILR 565
>gi|167587926|ref|ZP_02380314.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 575
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 149/334 (44%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + GA VF + F+ + L AV T+L VP + +A L S+
Sbjct: 276 LACVSTGAAMVFPGEAFDPAATLAAVADERCTALHGVPTMF--IAELDHPDFAKYDLSSL 333
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + +++ AYGMTETS ++F + D LE
Sbjct: 334 RTGIMAGSPCPIETMKRVVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEM-------- 384
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLA 174
+ VG+ PH+E+K+ V G + T+G VM YWD
Sbjct: 385 -----------RTTTVGRIQPHLEVKIVDPSGGIVPVGATGELCTKGYSVMRGYWDDDEK 433
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
V + W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP I
Sbjct: 434 TRDVLI-DGWMHTGDLATLDANGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSA 492
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
V G+ +A+ E V A + LR Q +E + +R C + + +K
Sbjct: 493 QVFGVPDAKYGEEVCAWIVLRAGEQLTEDD----------------VRAFC-QGQIAHYK 535
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
PR ++ + P+T TGK+++ +R+ ++ LK
Sbjct: 536 IPR-YIRFVDELPMTVTGKVQKFVMRQRMIDELK 568
>gi|359768354|ref|ZP_09272129.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
gi|359314229|dbj|GAB24962.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
Length = 517
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 51/329 (15%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ L G V P F+ +AL+ +E++ VT++ VPA+ ++ + R + S++
Sbjct: 225 LVTLQKGGHIVLAPTFDPAAALDTIEKYRVTTMFGVPAMFLFMSQVPRFETA--DLSSLR 282
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
++ GG +P LM+ YG+TET+ M L E+ ++ A
Sbjct: 283 YLICGGAPVPEPLMRRYAER--GLAFAQGYGLTETAPLALVMGLD----ESAAKIGAAGN 336
Query: 121 NVTP-------NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFL 173
V P ++ + P V VG P G + RG VM+ YW
Sbjct: 337 KVLPLSDVRLVDATNSP--VPVGTP----------------GEVCVRGPQVMVGYWRNQA 378
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
A +V E W TGDIG DD G +++V R + +GGENVYP EVE+VL HP +
Sbjct: 379 ATDAVIDDEGWFHTGDIGREDDDGYIYVVDRVKDMVITGGENVYPAEVESVLYSHPAVAE 438
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
I ++G+ +A+ E V A + ++ +E+ L E LR +++ L +
Sbjct: 439 IAILGLPDAKWGEAVTAVI--------------ATAPGQEVTL--EELRDFAKDQ-LARY 481
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 322
K P L + + P +GK+ + ++R +
Sbjct: 482 KLP-LRLEFVDALPRNPSGKVLKYQLREQ 509
>gi|15615666|ref|NP_243970.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
gi|10175726|dbj|BAB06823.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
Length = 566
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 50/319 (15%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M V +PKF K L+A+E+H VT P + L ++ SV+ +
Sbjct: 273 IMNAYKMVILPKFNPKDVLKAIEKHKVTLFPGAPTMYVGLINDPSIQDY--NLTSVEACI 330
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ ++ KL+ YG+TETS + TP +G
Sbjct: 331 SGAAPLPLEV-QQKFEQLTGGKLVEGYGLTETSPV---------AIATP-----IWGKRK 375
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPS 177
S +G P P ++ + S + + VG + RG VM YW++
Sbjct: 376 QRS--------IGIPWPDTDVMIISAETGEPADVNEVGELAVRGPQVMKGYWNRPEETAQ 427
Query: 178 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 237
V + W TGD+G +D+ G ++V R+ I +GG N+YP E+E +L +H I VV+
Sbjct: 428 VFKDD-WFLTGDMGYMDEDGYFYIVDRKKDMIIAGGFNIYPREIEEILYEHDAIKEAVVI 486
Query: 238 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 297
G +A E V A + L+E SE D CR K+L +K PR
Sbjct: 487 GAPDAYRGETVKAFIVLKEGRSVSEEELD----------------AFCR-KHLAAYKVPR 529
Query: 298 LFVLWRKPFPLTSTGKIRR 316
L+ +R+ P T GKI R
Sbjct: 530 LYE-FREELPKTLVGKILR 547
>gi|420256453|ref|ZP_14759297.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
gi|398043174|gb|EJL36103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
Length = 576
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A + VGA VF + F+ + L+AV + T+L VP + +A L +
Sbjct: 277 LACVSVGAAMVFPGEAFDPGATLKAVAEERCTALHGVPTMF--IAELDHPDFAIFDLSRL 334
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E MK + A++ AYGMTETS P +F
Sbjct: 335 RTGIMAGSPCPIETMKRVVSQMHLAEITIAYGMTETS-------------------PVSF 375
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFL 173
+ T + + + + VG+ PH+E+KV S V G + TRG VM YW D+
Sbjct: 376 QSSTTDPLDK-RTTTVGRIQPHLEVKVVDPLGSIVPVGETGELCTRGYSVMNGYWGDEAK 434
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
+ SV G W+ TGD+ +ID G +VGR + GGEN+YP E+E L +HP I
Sbjct: 435 TRESVVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQS 492
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
V G+ +++ E V A + +R L++E +++ CR + + +
Sbjct: 493 AQVFGVPDSKYGEEVCAWIVVRAGEH----------------LTAEDVQEFCRGQ-IAHY 535
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K P+ ++ + P+T TGK+++ +R ++ L+
Sbjct: 536 KIPK-YIRFVDELPMTVTGKVQKFVMRERMIDELR 569
>gi|421872931|ref|ZP_16304547.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372457877|emb|CCF14096.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 553
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 34/327 (10%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + GA V I F+ K LE V + T+L VP + +A L S++
Sbjct: 251 LACVATGATMVPIITFQPKVVLEVVSKTRCTALYGVPTMF--IAELNEPTFAQYDLSSLR 308
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P E+MK + + AYG TE+S +T T D ++E
Sbjct: 309 TGIMAGSPCPEEVMKNVVDKMGIRDITIAYGQTESSPVVT-QTRVDDSIE--------LR 359
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 180
T H P + + P E+ G + TRG VM Y+
Sbjct: 360 VSTVGRKHDPVEIKLMNPETGEEV-----ARGEQGELCTRGYQVMKGYYKMPEQTAQAID 414
Query: 181 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
E WL TGD+ ++D+ G + GR I GGEN+YP E+E L H ++ + V+G+
Sbjct: 415 SEGWLHTGDLATVDESGYYRITGRLKDMIIRGGENIYPREIEEFLYTHLKVLDVQVIGVP 474
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V+ACV++RE E L S+E L++ C+ K + FK P +V
Sbjct: 475 DPHYGEQVLACVKVREG---------------ETLTSNE-LKEFCQGK-IARFKIP-YYV 516
Query: 301 LWRKPFPLTSTGKIRRDEVRREVMSHL 327
+P+T++GKI++ ++R + + L
Sbjct: 517 QIVSDYPMTASGKIQKYKLREQAIEIL 543
>gi|301056035|ref|YP_003794246.1| acyl-CoA synthetase [Bacillus cereus biovar anthracis str. CI]
gi|300378204|gb|ADK07108.1| acyl-CoA synthase [Bacillus cereus biovar anthracis str. CI]
Length = 582
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 291 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 348
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 349 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 401
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 402 PDTEAMIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 447
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 448 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 507
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 508 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 550
Query: 301 LWRKPFPLTSTGKIRR 316
+R P T+ GKI R
Sbjct: 551 -FRDELPKTTVGKILR 565
>gi|296270396|ref|YP_003653028.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296093183|gb|ADG89135.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 508
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 145/316 (45%), Gaps = 46/316 (14%)
Query: 8 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 67
A V +P+FE AL+ +EQ VT + VP + + T + + +++ +++GG
Sbjct: 236 ATLVLMPRFEPVEALKLMEQEKVTLFVGVPTMYWAMLTAVHTGQA-SVPSALRTVVSGGA 294
Query: 68 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 127
LP E++K+ +F +++ YG++ETS +F L P PG
Sbjct: 295 SLPVEVLKDFKETF-GLQILEGYGLSETSPVASFNQLGRPA--KPG-------------- 337
Query: 128 HQPQGVCVGKPAPHVELKVCS---DGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 184
+G P VE+K+ + VG I RG +VM Y+ + A V + W
Sbjct: 338 ------SIGTPIWGVEMKLVDADWNEVDDVGEIAIRGHNVMKGYYKRPEATAEVMK-DGW 390
Query: 185 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 244
TGDI D+ G +++ R I GG NVYP EVE VL+ HP + VVG+ +
Sbjct: 391 FRTGDIARRDEDGYYYIIDRAKDMIIRGGFNVYPREVEEVLMTHPAVSLAAVVGVPHESH 450
Query: 245 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 304
E + A + + + +E +K +N+ +K PR+ + +R
Sbjct: 451 GEEIKAFIIRKPGAEVTEEELIAWAK-----------------ENMAAYKYPRI-IEFRD 492
Query: 305 PFPLTSTGKIRRDEVR 320
P+T+TGKI + E+R
Sbjct: 493 SLPMTATGKILKRELR 508
>gi|229180790|ref|ZP_04308128.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus 172560W]
gi|228602768|gb|EEK60251.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus 172560W]
Length = 563
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 149/326 (45%), Gaps = 48/326 (14%)
Query: 4 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 63
+M G V IPKF+ K EA+++H VT P I L +K+ S++ +
Sbjct: 272 IMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEY--DISSIRACI 329
Query: 64 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 123
+G LP E+ +E + KL+ YG+TE+S L++ ++P + G
Sbjct: 330 SGSAPLPVEV-QEKFETVTGGKLVEGYGLTESSPVTHSNFLWE------KRVPGSIGVPW 382
Query: 124 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG-- 181
P++ + G+ P +G I+ +G +M YW+ KP +
Sbjct: 383 PDTEAIIMSLETGEALP----------PGEIGEIVVKGPQIMKGYWN----KPEETAAVL 428
Query: 182 -EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 240
+ WL TGD+G +D+ G ++ R+ I + G NVYP EVE VL +H + +V +G+
Sbjct: 429 QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVP 488
Query: 241 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 300
+ E V A V L+E + SE +Q ++ K L +K P+++
Sbjct: 489 DPYRGETVKAFVVLKEGTECSEEELNQFAR-----------------KYLAAYKVPKVYE 531
Query: 301 LWRKPFPLTSTGKIRR----DEVRRE 322
+R P T+ GKI R DE +R+
Sbjct: 532 -FRDELPKTTVGKILRRVLIDEEKRK 556
>gi|118353816|ref|XP_001010173.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291940|gb|EAR89928.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 580
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 148/324 (45%), Gaps = 47/324 (14%)
Query: 16 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 75
F +K A+E+V ++ TS+ VP + + + ++KK + G P LM
Sbjct: 287 FSAKKAMESVTKYKCTSIYGVPTMFLEYVKEYESNPSIYNYSTLKKGVMSGALCPQALMS 346
Query: 76 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 135
+ + + + YG TE S + F T + +LE + V
Sbjct: 347 KLISEWDVPNIQICYGQTEVSP-IIFQTNQNDSLED-------------------KCTTV 386
Query: 136 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 190
G PH E+K+ + V G I RG VM +YW A + W+ TGD+
Sbjct: 387 GTIFPHSEVKIINKKGHIVPIGESGEICIRGFGVMEKYWADRKATSKTIDQDQWIKTGDM 446
Query: 191 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 250
G ID+ G + +VGR I GGEN+YP+E+E L H I + V+G+ + + E A
Sbjct: 447 GIIDERGYMKIVGRLKEMIIRGGENIYPKEIEEYLRSHRSIQDVQVLGVPDEKFGEETFA 506
Query: 251 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 310
++L++ DQ + K++ ++C+ + + +K P+ +V + FPLT
Sbjct: 507 LIKLKQ---------DQVLEGKDIF-------EYCKGQ-IAHYKVPK-YVKFVNEFPLTV 548
Query: 311 TGKIRR----DEVRREVMSHLKSL 330
TGK ++ DE+++E+ + K+
Sbjct: 549 TGKPQKFKMLDELKKELQQNPKAF 572
>gi|398846412|ref|ZP_10603391.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398252595|gb|EJN37773.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 532
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 143/325 (44%), Gaps = 45/325 (13%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+ L+ GA + F+++ E + + VT L P + L R+ +T S++
Sbjct: 242 LTCLIAGATILPHAVFDAELVFERIARERVTVLPGAPTLYLSLLAHPRLAET--DLSSLR 299
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G +P L++ + + + +AYG+TE TL DP QA
Sbjct: 300 VAVTGSASIPPSLIERMRSELGFSVVTTAYGLTECGG---LATLCDP---------QASA 347
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAK 175
V + G+P P E+ + S G I RG H+M Y+ A
Sbjct: 348 EVIAGTS--------GQPLPGTEVSIRGPDNASLAQGQTGEICLRGFHIMQGYFQDPAAT 399
Query: 176 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 235
E WL TGD+G +D GN+ + R GG N YP E+EA LL HP I +
Sbjct: 400 AEAIDAEGWLHTGDVGCLDPAGNLVITDRLKDMYIVGGFNCYPAEIEAALLGHPAIAQVA 459
Query: 236 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 295
VVGIA+AR+ E+ ACV LR+ Q E +EL+ S RE+ + +K
Sbjct: 460 VVGIADARMGEVGCACVVLRQGQQLGE---------QELIGWS-------RER-MANYKV 502
Query: 296 PRLFVLWRKPFPLTSTGKIRRDEVR 320
PR V + PL + K+ ++++R
Sbjct: 503 PRQ-VRFFSALPLNPSNKVAKNDLR 526
>gi|386334612|ref|YP_006030783.1| long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
gi|421899919|ref|ZP_16330282.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|206591125|emb|CAQ56737.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|334197062|gb|AEG70247.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
Length = 573
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 154/335 (45%), Gaps = 49/335 (14%)
Query: 1 MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 59
+A GAC VF + F+ + L V + T+L VP + +A L + S+
Sbjct: 274 LACTATGACMVFPGEAFDPLATLRTVAEERCTALHGVPTMF--IAQLDHPEFHSFDVSSL 331
Query: 60 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 119
+ + G P E+MK ++ AYGMTETS P +F
Sbjct: 332 RGGIMAGSPCPIEVMKRVVAEMHLREITIAYGMTETS-------------------PVSF 372
Query: 120 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 173
+ + + + + VG+ PH+++K+ DG+ V G + T+G VML YWD
Sbjct: 373 QSAVTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-E 429
Query: 174 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 233
AK + S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP +
Sbjct: 430 AKTAESVVDGWMRTGDLATFDADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQA 489
Query: 234 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 293
+ V G+ + + E V A + L+ Q +E E +R C + + +
Sbjct: 490 VNVFGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRAFC-QGQIAHY 532
Query: 294 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 533 KIPR-YIRFVPEMPMTVTGKVQKFIMRERMIEELK 566
>gi|384044522|ref|YP_005492539.1| fatty-acid--coa ligase transmembrane protein [Bacillus megaterium
WSH-002]
gi|345442213|gb|AEN87230.1| Putative fatty-acid--coa ligase transmembrane protein [Bacillus
megaterium WSH-002]
Length = 528
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 47/334 (14%)
Query: 1 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 60
+A + VGA + I +F+ S L VE+ T+L VP + +A L ++ +++
Sbjct: 236 LACVSVGATMLPIIEFQPSSVLRTVEKEKCTALHGVPTMF--IAELNALEFNQYDLSTLR 293
Query: 61 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 120
+ G P+E+MK N ++ AYG TETS +T
Sbjct: 294 TGIMAGSNCPAEVMKRVINDMGINEITIAYGQTETSPVIT-------------------- 333
Query: 121 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLA 174
TP + + VGK HV++++ + + G + +G M Y+ +
Sbjct: 334 QTTPTDSIERRVQTVGKVHDHVQIQIINPVTGKQASFGEQGELCAKGYLTMKGYY-KMPE 392
Query: 175 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 234
+ + E WL TGD+ +ID G V + GR I GGEN+YP E+E L + P + +
Sbjct: 393 ETEKTIVEGWLHTGDLATIDKDGYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVEDV 452
Query: 235 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 294
+VGI + + E V AC++L++ L+++ ++ C+ K L FK
Sbjct: 453 QIVGIPDPKYGERVAACIKLKQHS----------------FLTAQEIKDFCKGK-LAHFK 495
Query: 295 APRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 328
P + + FP+T++GKI++ +++ ++++ K
Sbjct: 496 IPE-HIYFIDDFPMTASGKIQKYKLKEKIIALYK 528
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,476,301,892
Number of Sequences: 23463169
Number of extensions: 236076591
Number of successful extensions: 629329
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 30783
Number of HSP's successfully gapped in prelim test: 17671
Number of HSP's that attempted gapping in prelim test: 544845
Number of HSP's gapped (non-prelim): 63721
length of query: 334
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 191
effective length of database: 9,003,962,200
effective search space: 1719756780200
effective search space used: 1719756780200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)