Query 019928
Match_columns 334
No_of_seqs 173 out of 1722
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 05:39:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019928.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019928hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2882 p-Nitrophenyl phosphat 100.0 2.6E-43 5.5E-48 314.5 25.9 258 74-333 13-272 (306)
2 COG0647 NagD Predicted sugar p 100.0 5E-42 1.1E-46 309.4 26.2 236 78-334 3-239 (269)
3 PLN02645 phosphoglycolate phos 100.0 2.3E-40 5.1E-45 309.3 29.4 267 68-334 13-279 (311)
4 PRK10444 UMP phosphatase; Prov 100.0 6.3E-38 1.4E-42 283.3 27.3 223 83-334 1-223 (248)
5 TIGR01452 PGP_euk phosphoglyco 100.0 1E-37 2.2E-42 287.5 28.6 251 82-334 1-251 (279)
6 TIGR01457 HAD-SF-IIA-hyp2 HAD- 100.0 1.3E-37 2.9E-42 282.0 28.1 226 83-333 1-226 (249)
7 TIGR01458 HAD-SF-IIA-hyp3 HAD- 100.0 3.5E-34 7.5E-39 260.8 26.6 223 83-334 1-228 (257)
8 TIGR01460 HAD-SF-IIA Haloacid 100.0 3.3E-34 7.3E-39 257.8 24.9 234 86-332 1-236 (236)
9 TIGR01456 CECR5 HAD-superfamil 100.0 6E-34 1.3E-38 267.1 19.3 245 85-334 2-295 (321)
10 KOG3040 Predicted sugar phosph 100.0 1.1E-32 2.5E-37 232.5 19.5 225 81-334 5-230 (262)
11 TIGR01459 HAD-SF-IIA-hyp4 HAD- 100.0 4.6E-29 9.9E-34 225.4 24.8 232 77-331 2-242 (242)
12 KOG1618 Predicted phosphatase 99.9 1.4E-21 3E-26 175.1 14.5 247 84-334 36-344 (389)
13 PF13344 Hydrolase_6: Haloacid 99.8 1.1E-19 2.3E-24 141.9 11.4 101 86-188 1-101 (101)
14 COG0637 Predicted phosphatase/ 99.8 2.4E-19 5.2E-24 159.7 7.0 54 278-332 135-188 (221)
15 TIGR01422 phosphonatase phosph 99.7 2E-17 4.3E-22 150.3 13.8 56 277-333 148-204 (253)
16 PLN02770 haloacid dehalogenase 99.7 1.6E-18 3.5E-23 157.1 5.8 101 227-332 110-210 (248)
17 PRK13478 phosphonoacetaldehyde 99.7 1.7E-17 3.7E-22 151.9 12.5 55 278-333 151-206 (267)
18 PRK13226 phosphoglycolate phos 99.7 7.2E-18 1.6E-22 151.0 8.7 56 277-333 143-198 (229)
19 TIGR02253 CTE7 HAD superfamily 99.7 1.6E-17 3.4E-22 147.5 10.0 103 227-333 96-198 (221)
20 PLN02779 haloacid dehalogenase 99.7 1.7E-17 3.7E-22 153.3 9.6 53 279-332 196-248 (286)
21 PRK11587 putative phosphatase; 99.7 3E-17 6.4E-22 145.9 10.6 51 281-332 134-184 (218)
22 PLN03243 haloacid dehalogenase 99.7 1E-17 2.2E-22 152.7 7.3 99 227-330 111-209 (260)
23 COG0546 Gph Predicted phosphat 99.7 4.7E-18 1E-22 151.4 4.8 102 227-333 91-192 (220)
24 TIGR01990 bPGM beta-phosphoglu 99.7 2.4E-18 5.1E-23 148.5 2.6 51 279-330 135-185 (185)
25 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 2.9E-16 6.4E-21 128.4 14.4 46 284-330 84-131 (132)
26 PRK13288 pyrophosphatase PpaX; 99.7 1.6E-17 3.4E-22 147.1 6.6 99 229-332 86-184 (214)
27 PRK10725 fructose-1-P/6-phosph 99.7 1.3E-17 2.8E-22 144.4 5.9 93 232-330 94-186 (188)
28 PLN02575 haloacid dehalogenase 99.7 9.6E-18 2.1E-22 158.9 4.6 100 228-332 219-318 (381)
29 PLN02940 riboflavin kinase 99.7 8.6E-18 1.9E-22 161.2 3.5 98 230-332 98-196 (382)
30 TIGR00213 GmhB_yaeD D,D-heptos 99.7 4.9E-16 1.1E-20 133.6 14.0 50 283-333 104-154 (176)
31 PRK10563 6-phosphogluconate ph 99.7 3.6E-17 7.8E-22 145.5 7.1 51 281-332 138-188 (221)
32 TIGR03351 PhnX-like phosphonat 99.7 9.7E-17 2.1E-21 142.5 9.6 54 279-333 139-194 (220)
33 PRK06769 hypothetical protein; 99.7 1.9E-16 4.2E-21 135.7 11.0 49 284-333 92-140 (173)
34 PRK10748 flavin mononucleotide 99.7 1.9E-16 4.1E-21 142.6 11.2 96 227-332 115-210 (238)
35 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 4.1E-17 8.9E-22 140.7 6.5 96 227-329 90-185 (185)
36 TIGR01656 Histidinol-ppas hist 99.7 3.9E-16 8.6E-21 130.2 11.9 48 284-332 100-147 (147)
37 TIGR01449 PGP_bact 2-phosphogl 99.7 1.1E-17 2.3E-22 147.7 2.6 100 229-333 89-188 (213)
38 TIGR02252 DREG-2 REG-2-like, H 99.7 4.7E-17 1E-21 142.8 5.9 97 227-328 107-203 (203)
39 TIGR01261 hisB_Nterm histidino 99.7 3.9E-16 8.5E-21 132.1 11.3 49 284-333 102-150 (161)
40 PRK10826 2-deoxyglucose-6-phos 99.7 3.8E-17 8.3E-22 145.5 5.4 101 227-332 94-194 (222)
41 TIGR01428 HAD_type_II 2-haloal 99.7 1.1E-16 2.3E-21 140.0 6.1 99 228-331 95-193 (198)
42 KOG2914 Predicted haloacid-hal 99.7 3.9E-16 8.5E-21 137.5 9.2 185 81-331 8-197 (222)
43 PRK08942 D,D-heptose 1,7-bisph 99.7 2.2E-15 4.7E-20 130.1 13.6 49 284-333 102-150 (181)
44 TIGR01454 AHBA_synth_RP 3-amin 99.6 8.7E-17 1.9E-21 141.4 4.5 101 228-333 78-178 (205)
45 PRK14988 GMP/IMP nucleotidase; 99.6 8.2E-16 1.8E-20 137.3 10.4 101 227-332 95-196 (224)
46 TIGR02247 HAD-1A3-hyp Epoxide 99.6 4.1E-15 8.9E-20 131.2 13.1 103 227-332 96-198 (211)
47 PRK13223 phosphoglycolate phos 99.6 3.8E-16 8.2E-21 143.5 6.5 100 228-332 104-203 (272)
48 TIGR02254 YjjG/YfnB HAD superf 99.6 1.9E-15 4E-20 134.2 10.7 101 227-332 99-200 (224)
49 PLN02919 haloacid dehalogenase 99.6 3.6E-16 7.8E-21 166.7 6.7 100 229-332 165-264 (1057)
50 PRK09456 ?-D-glucose-1-phospha 99.6 2E-15 4.3E-20 132.3 10.2 101 227-332 86-187 (199)
51 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 6.6E-15 1.4E-19 125.3 12.9 45 284-328 107-160 (166)
52 PRK09449 dUMP phosphatase; Pro 99.6 2E-15 4.3E-20 134.4 9.9 101 227-332 97-198 (224)
53 TIGR01668 YqeG_hyp_ppase HAD s 99.6 5.6E-15 1.2E-19 126.3 12.0 50 284-333 90-139 (170)
54 PRK13222 phosphoglycolate phos 99.6 7.8E-16 1.7E-20 136.9 6.9 55 277-332 141-195 (226)
55 KOG3085 Predicted hydrolase (H 99.6 2.6E-15 5.7E-20 132.8 10.0 99 229-332 117-215 (237)
56 TIGR01993 Pyr-5-nucltdase pyri 99.6 1.5E-15 3.3E-20 131.2 8.0 95 227-329 86-184 (184)
57 COG0241 HisB Histidinol phosph 99.6 1.3E-14 2.8E-19 123.5 13.1 139 83-334 5-153 (181)
58 COG1011 Predicted hydrolase (H 99.6 5.3E-15 1.2E-19 131.8 10.3 102 227-333 101-202 (229)
59 PRK10530 pyridoxal phosphate ( 99.6 6.1E-14 1.3E-18 128.4 17.0 58 82-142 2-60 (272)
60 COG2179 Predicted hydrolase of 99.6 8.9E-15 1.9E-19 120.7 10.1 47 284-330 92-138 (175)
61 PHA02597 30.2 hypothetical pro 99.6 1E-14 2.2E-19 127.4 10.4 99 227-333 76-177 (197)
62 PRK06698 bifunctional 5'-methy 99.5 2.5E-15 5.5E-20 147.9 3.6 97 228-332 333-429 (459)
63 PRK13225 phosphoglycolate phos 99.5 1.2E-14 2.7E-19 133.3 7.6 48 285-333 195-242 (273)
64 TIGR01509 HAD-SF-IA-v3 haloaci 99.5 2.6E-14 5.6E-19 122.7 9.0 95 229-329 89-183 (183)
65 PRK01158 phosphoglycolate phos 99.5 2.2E-13 4.8E-18 121.6 14.0 58 82-142 2-60 (230)
66 cd01427 HAD_like Haloacid deha 99.5 2.3E-13 5E-18 110.0 12.2 49 280-329 91-139 (139)
67 PLN02811 hydrolase 99.5 2E-14 4.2E-19 128.0 5.3 53 280-333 132-187 (220)
68 COG0561 Cof Predicted hydrolas 99.5 1.8E-14 3.9E-19 131.6 4.8 66 82-153 2-68 (264)
69 PRK10513 sugar phosphate phosp 99.5 1.2E-14 2.5E-19 133.2 3.2 69 82-153 2-71 (270)
70 PHA02530 pseT polynucleotide k 99.5 3.2E-13 7E-18 125.6 12.0 50 284-334 250-300 (300)
71 PF13419 HAD_2: Haloacid dehal 99.5 3E-14 6.5E-19 120.6 4.5 98 227-329 79-176 (176)
72 PRK05446 imidazole glycerol-ph 99.5 9.5E-13 2.1E-17 124.2 14.5 49 284-333 103-151 (354)
73 PRK03669 mannosyl-3-phosphogly 99.4 2.2E-12 4.7E-17 118.5 15.1 69 81-154 5-74 (271)
74 PRK10976 putative hydrolase; P 99.4 5.9E-13 1.3E-17 121.7 10.9 57 83-142 2-59 (266)
75 PF13242 Hydrolase_like: HAD-h 99.4 1.7E-13 3.7E-18 101.0 5.8 52 283-334 2-53 (75)
76 TIGR01685 MDP-1 magnesium-depe 99.4 9.2E-13 2E-17 112.5 10.4 49 284-333 110-160 (174)
77 TIGR01482 SPP-subfamily Sucros 99.4 2.7E-12 5.9E-17 114.2 13.7 54 86-142 1-55 (225)
78 TIGR01548 HAD-SF-IA-hyp1 haloa 99.4 2.9E-13 6.3E-18 118.3 7.3 86 231-322 112-197 (197)
79 TIGR01487 SPP-like sucrose-pho 99.4 5.4E-12 1.2E-16 111.8 15.3 57 83-142 1-58 (215)
80 PRK15126 thiamin pyrimidine py 99.4 5.5E-13 1.2E-17 122.4 8.8 57 83-142 2-59 (272)
81 TIGR01670 YrbI-phosphatas 3-de 99.4 1.3E-12 2.8E-17 109.9 10.4 47 284-332 74-120 (154)
82 TIGR01549 HAD-SF-IA-v1 haloaci 99.4 1.8E-13 3.8E-18 114.7 5.1 45 276-323 110-154 (154)
83 TIGR02726 phenyl_P_delta pheny 99.4 1.3E-12 2.9E-17 111.2 10.2 43 284-327 80-122 (169)
84 PRK09484 3-deoxy-D-manno-octul 99.4 2.4E-12 5.3E-17 111.3 10.6 46 284-331 94-139 (183)
85 PRK00192 mannosyl-3-phosphogly 99.4 1E-11 2.2E-16 114.2 14.7 58 82-142 3-61 (273)
86 TIGR01691 enolase-ppase 2,3-di 99.4 3.1E-12 6.7E-17 113.6 10.5 102 227-332 97-198 (220)
87 TIGR00338 serB phosphoserine p 99.4 7.9E-12 1.7E-16 110.8 12.8 43 284-327 150-192 (219)
88 TIGR01493 HAD-SF-IA-v2 Haloaci 99.4 5.5E-13 1.2E-17 114.0 4.5 73 245-322 103-175 (175)
89 PLN02887 hydrolase family prot 99.3 2.2E-11 4.8E-16 121.9 16.3 64 76-142 301-365 (580)
90 TIGR00099 Cof-subfamily Cof su 99.3 3.3E-12 7.2E-17 116.1 9.1 55 85-142 1-56 (256)
91 TIGR01485 SPP_plant-cyano sucr 99.3 6.3E-11 1.4E-15 107.4 17.2 200 85-332 3-212 (249)
92 PF09419 PGP_phosphatase: Mito 99.3 4.6E-12 9.9E-17 107.0 8.7 48 81-128 39-90 (168)
93 TIGR02463 MPGP_rel mannosyl-3- 99.3 3.1E-11 6.8E-16 107.3 14.4 66 85-155 1-67 (221)
94 TIGR02461 osmo_MPG_phos mannos 99.3 5.3E-12 1.1E-16 112.8 7.9 63 85-153 1-63 (225)
95 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 1.6E-11 3.4E-16 100.0 8.5 41 84-124 1-54 (128)
96 PLN02954 phosphoserine phospha 99.3 5.6E-11 1.2E-15 105.7 12.6 44 284-330 153-196 (224)
97 TIGR02471 sucr_syn_bact_C sucr 99.3 2.2E-11 4.8E-16 109.5 9.8 65 85-154 1-65 (236)
98 TIGR01486 HAD-SF-IIB-MPGP mann 99.3 1.5E-10 3.3E-15 105.3 15.4 63 85-153 1-64 (256)
99 PF08282 Hydrolase_3: haloacid 99.2 3.9E-10 8.4E-15 101.0 15.9 64 86-155 1-65 (254)
100 TIGR01672 AphA HAD superfamily 99.2 9.3E-11 2E-15 105.1 11.3 43 283-333 172-214 (237)
101 KOG3109 Haloacid dehalogenase- 99.2 4E-11 8.7E-16 103.2 7.3 100 228-331 103-206 (244)
102 PRK11133 serB phosphoserine ph 99.2 8.4E-11 1.8E-15 110.2 9.9 45 283-328 245-289 (322)
103 TIGR01484 HAD-SF-IIB HAD-super 99.2 4.6E-10 1E-14 98.4 14.0 43 283-326 160-202 (204)
104 TIGR01663 PNK-3'Pase polynucle 99.2 2.7E-10 5.8E-15 112.7 12.6 48 81-128 166-226 (526)
105 PRK11009 aphA acid phosphatase 99.1 7.6E-10 1.7E-14 99.1 13.5 41 284-332 173-213 (237)
106 PF08645 PNK3P: Polynucleotide 99.1 2.8E-10 6.1E-15 96.1 7.7 43 283-326 95-152 (159)
107 PRK10187 trehalose-6-phosphate 99.1 1.1E-09 2.5E-14 100.2 11.8 55 84-141 15-76 (266)
108 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.1 4.9E-10 1.1E-14 97.6 8.9 45 285-330 146-190 (201)
109 PTZ00445 p36-lilke protein; Pr 99.1 5.8E-10 1.3E-14 96.5 8.5 48 284-332 156-207 (219)
110 PTZ00174 phosphomannomutase; P 99.0 4E-09 8.8E-14 95.5 12.7 55 81-138 3-58 (247)
111 PRK12702 mannosyl-3-phosphogly 99.0 4.3E-09 9.3E-14 96.0 12.5 58 83-143 1-59 (302)
112 PRK14502 bifunctional mannosyl 99.0 2E-08 4.4E-13 101.0 17.5 59 81-142 414-473 (694)
113 PLN02382 probable sucrose-phos 99.0 6.9E-09 1.5E-13 100.6 13.0 48 284-332 173-223 (413)
114 TIGR01686 FkbH FkbH-like domai 99.0 2.7E-09 5.8E-14 100.4 9.3 41 284-325 85-125 (320)
115 smart00577 CPDc catalytic doma 98.9 6.9E-09 1.5E-13 86.6 9.6 38 284-325 100-137 (148)
116 PRK09552 mtnX 2-hydroxy-3-keto 98.8 5.3E-09 1.2E-13 92.9 6.9 42 283-325 131-182 (219)
117 PRK13582 thrH phosphoserine ph 98.8 2.6E-08 5.6E-13 87.3 11.0 40 286-326 128-167 (205)
118 TIGR00685 T6PP trehalose-phosp 98.8 3.9E-08 8.4E-13 88.9 12.3 44 288-332 169-219 (244)
119 COG1778 Low specificity phosph 98.8 1.3E-08 2.8E-13 83.4 7.1 37 289-326 86-122 (170)
120 TIGR01489 DKMTPPase-SF 2,3-dik 98.7 1.7E-07 3.6E-12 80.6 10.1 38 283-324 146-183 (188)
121 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.7 1.6E-07 3.4E-12 82.1 9.8 44 284-328 153-196 (202)
122 PLN02423 phosphomannomutase 98.6 1.2E-07 2.5E-12 85.9 9.0 53 82-138 5-59 (245)
123 TIGR03333 salvage_mtnX 2-hydro 98.6 1E-07 2.2E-12 84.5 6.4 40 284-324 128-177 (214)
124 PF05116 S6PP: Sucrose-6F-phos 98.6 4.1E-07 8.8E-12 82.4 9.9 192 84-331 3-208 (247)
125 TIGR01488 HAD-SF-IB Haloacid D 98.5 6.8E-07 1.5E-11 76.2 9.8 38 284-322 140-177 (177)
126 TIGR01533 lipo_e_P4 5'-nucleot 98.5 1E-06 2.2E-11 80.3 10.8 61 82-142 74-161 (266)
127 COG0560 SerB Phosphoserine pho 98.5 1.7E-06 3.7E-11 76.5 11.9 43 284-327 142-184 (212)
128 TIGR02137 HSK-PSP phosphoserin 98.5 2.5E-06 5.4E-11 75.0 12.8 42 284-329 129-170 (203)
129 smart00775 LNS2 LNS2 domain. T 98.5 1.5E-06 3.3E-11 73.2 10.9 45 85-132 1-57 (157)
130 PF00702 Hydrolase: haloacid d 98.4 1.1E-06 2.3E-11 77.0 9.3 39 284-323 177-215 (215)
131 PRK14501 putative bifunctional 98.4 5.8E-06 1.3E-10 86.2 14.2 58 81-141 490-554 (726)
132 TIGR01684 viral_ppase viral ph 98.4 8.1E-07 1.8E-11 81.1 6.8 71 80-153 123-197 (301)
133 TIGR01689 EcbF-BcbF capsule bi 98.3 2.1E-06 4.6E-11 69.3 6.1 44 84-130 2-52 (126)
134 PHA03398 viral phosphatase sup 98.1 9.6E-06 2.1E-10 74.2 7.2 70 81-153 126-199 (303)
135 COG4229 Predicted enolase-phos 98.1 2.6E-05 5.7E-10 65.7 8.8 47 282-329 157-203 (229)
136 PLN02205 alpha,alpha-trehalose 98.0 4.1E-05 9E-10 80.6 11.9 55 82-139 595-654 (854)
137 PLN02580 trehalose-phosphatase 98.0 0.0001 2.2E-09 70.5 13.5 51 85-139 121-177 (384)
138 PF12689 Acid_PPase: Acid Phos 98.0 1.3E-05 2.7E-10 68.1 6.6 46 287-333 109-154 (169)
139 PRK08238 hypothetical protein; 97.8 0.0002 4.3E-09 70.9 11.9 44 284-332 124-167 (479)
140 TIGR01544 HAD-SF-IE haloacid d 97.8 0.00013 2.8E-09 66.8 9.8 33 289-322 196-230 (277)
141 PRK11590 hypothetical protein; 97.8 9.2E-05 2E-09 65.4 8.6 36 292-329 166-201 (211)
142 PLN03017 trehalose-phosphatase 97.8 0.00059 1.3E-08 64.8 14.3 49 84-136 112-166 (366)
143 PLN02151 trehalose-phosphatase 97.6 0.00075 1.6E-08 63.9 12.3 50 84-137 99-154 (354)
144 TIGR02244 HAD-IG-Ncltidse HAD 97.6 0.00038 8.2E-09 65.7 10.2 40 291-330 283-323 (343)
145 PRK10671 copA copper exporting 97.5 0.00031 6.7E-09 74.5 9.2 81 227-324 652-733 (834)
146 TIGR01511 ATPase-IB1_Cu copper 97.4 0.011 2.4E-07 60.0 18.5 82 226-324 406-487 (562)
147 KOG2961 Predicted hydrolase (H 97.4 0.0014 3E-08 53.8 9.1 85 243-333 81-170 (190)
148 PF03767 Acid_phosphat_B: HAD 97.4 0.00022 4.8E-09 63.8 4.7 63 81-143 70-159 (229)
149 KOG1615 Phosphoserine phosphat 97.4 0.00096 2.1E-08 57.1 8.0 32 287-321 160-191 (227)
150 TIGR01675 plant-AP plant acid 97.3 0.00046 1E-08 61.4 5.8 63 81-143 75-164 (229)
151 TIGR02251 HIF-SF_euk Dullard-l 97.3 0.00022 4.8E-09 60.3 3.3 36 291-327 101-136 (162)
152 TIGR01525 ATPase-IB_hvy heavy 97.2 0.0035 7.6E-08 63.5 11.8 57 82-141 363-424 (556)
153 COG1877 OtsB Trehalose-6-phosp 97.2 0.0074 1.6E-07 55.0 12.4 57 82-141 17-80 (266)
154 COG3769 Predicted hydrolase (H 97.1 0.0011 2.3E-08 58.0 5.9 60 81-143 5-64 (274)
155 PF08235 LNS2: LNS2 (Lipin/Ned 97.1 0.00082 1.8E-08 56.2 4.7 42 85-129 1-54 (157)
156 TIGR01680 Veg_Stor_Prot vegeta 97.0 0.0015 3.2E-08 59.4 6.3 62 82-143 100-189 (275)
157 PF02358 Trehalose_PPase: Treh 96.6 0.0052 1.1E-07 55.1 6.7 48 284-332 163-218 (235)
158 PRK11033 zntA zinc/cadmium/mer 96.5 0.19 4.2E-06 52.7 18.6 79 227-324 570-649 (741)
159 COG4087 Soluble P-type ATPase 96.5 0.035 7.7E-07 44.6 9.9 40 83-123 14-53 (152)
160 PF06888 Put_Phosphatase: Puta 96.4 0.065 1.4E-06 48.0 12.0 43 288-331 152-198 (234)
161 TIGR01545 YfhB_g-proteo haloac 96.3 0.0084 1.8E-07 52.9 6.1 31 297-329 170-200 (210)
162 TIGR01522 ATPase-IIA2_Ca golgi 96.3 0.028 6.1E-07 60.1 11.0 60 82-144 502-570 (884)
163 COG4996 Predicted phosphatase 96.2 0.015 3.2E-07 46.8 5.8 56 85-143 2-82 (164)
164 TIGR02468 sucrsPsyn_pln sucros 96.0 0.13 2.8E-06 55.3 13.7 63 88-158 777-845 (1050)
165 COG4359 Uncharacterized conser 95.9 0.087 1.9E-06 45.0 9.7 29 294-323 151-179 (220)
166 COG2503 Predicted secreted aci 95.9 0.016 3.5E-07 51.4 5.4 63 82-144 78-168 (274)
167 PF11019 DUF2608: Protein of u 95.9 0.13 2.8E-06 46.8 11.5 47 284-331 160-210 (252)
168 TIGR01512 ATPase-IB2_Cd heavy 95.7 0.07 1.5E-06 53.9 10.1 88 225-332 362-451 (536)
169 PF13419 HAD_2: Haloacid dehal 95.1 0.17 3.7E-06 41.9 9.0 87 99-189 77-173 (176)
170 TIGR01116 ATPase-IIA1_Ca sarco 95.0 0.21 4.5E-06 53.8 11.3 44 97-143 535-578 (917)
171 PF12710 HAD: haloacid dehalog 94.8 0.029 6.2E-07 48.0 3.5 21 299-320 172-192 (192)
172 COG4030 Uncharacterized protei 94.7 0.79 1.7E-05 40.6 11.9 42 97-143 81-123 (315)
173 PF05152 DUF705: Protein of un 94.4 0.12 2.6E-06 47.1 6.6 70 80-152 119-192 (297)
174 PF03031 NIF: NLI interacting 94.2 0.027 5.8E-07 47.1 1.9 39 84-123 1-59 (159)
175 PF06941 NT5C: 5' nucleotidase 94.0 0.1 2.2E-06 45.1 5.2 29 99-127 73-101 (191)
176 TIGR01428 HAD_type_II 2-haloal 93.6 0.71 1.5E-05 39.7 9.8 87 99-189 92-188 (198)
177 COG5663 Uncharacterized conser 93.4 0.24 5.2E-06 41.6 6.1 34 294-331 129-162 (194)
178 PF00702 Hydrolase: haloacid d 93.3 0.046 9.9E-07 47.5 1.8 31 83-113 1-33 (215)
179 KOG2134 Polynucleotide kinase 93.0 0.11 2.3E-06 49.3 3.9 63 81-143 73-157 (422)
180 PLN02770 haloacid dehalogenase 93.0 0.76 1.6E-05 41.4 9.4 86 100-189 109-204 (248)
181 TIGR01454 AHBA_synth_RP 3-amin 92.9 0.94 2E-05 39.2 9.5 89 97-189 73-171 (205)
182 TIGR02252 DREG-2 REG-2-like, H 92.6 0.88 1.9E-05 39.3 8.9 85 99-188 105-200 (203)
183 PF06437 ISN1: IMP-specific 5' 92.5 0.39 8.4E-06 45.6 6.8 55 82-136 146-203 (408)
184 TIGR02009 PGMB-YQAB-SF beta-ph 92.3 0.81 1.8E-05 38.7 8.3 86 98-189 87-182 (185)
185 KOG2630 Enolase-phosphatase E- 92.2 0.92 2E-05 40.2 8.3 47 283-330 178-224 (254)
186 PRK13288 pyrophosphatase PpaX; 92.1 1.1 2.4E-05 39.0 9.1 87 99-189 82-178 (214)
187 TIGR02253 CTE7 HAD superfamily 91.9 1.2 2.5E-05 39.0 8.9 87 99-189 94-191 (221)
188 TIGR01449 PGP_bact 2-phosphogl 91.9 1.3 2.8E-05 38.4 9.2 89 98-190 84-182 (213)
189 PLN03243 haloacid dehalogenase 91.8 1.1 2.5E-05 40.7 9.1 86 100-189 110-205 (260)
190 PRK14988 GMP/IMP nucleotidase; 91.8 1.1 2.3E-05 39.8 8.6 85 100-188 94-188 (224)
191 PRK10826 2-deoxyglucose-6-phos 91.5 1.1 2.4E-05 39.3 8.5 87 99-189 92-188 (222)
192 PRK11587 putative phosphatase; 91.4 2.5 5.5E-05 37.0 10.6 86 99-189 83-178 (218)
193 TIGR01509 HAD-SF-IA-v3 haloaci 91.3 1.7 3.8E-05 36.4 9.2 86 99-189 85-180 (183)
194 TIGR01459 HAD-SF-IIA-hyp4 HAD- 91.3 0.33 7.2E-06 43.5 4.9 89 226-324 25-116 (242)
195 PLN03063 alpha,alpha-trehalose 91.2 0.28 6.1E-06 51.9 4.9 56 83-141 507-572 (797)
196 TIGR02250 FCP1_euk FCP1-like p 91.2 0.39 8.4E-06 40.3 4.8 22 101-123 60-81 (156)
197 COG5083 SMP2 Uncharacterized p 91.1 0.48 1E-05 45.7 5.8 75 81-155 373-462 (580)
198 TIGR01990 bPGM beta-phosphoglu 90.8 1.8 3.8E-05 36.6 8.8 86 98-189 86-181 (185)
199 TIGR02245 HAD_IIID1 HAD-superf 90.7 1.1 2.3E-05 39.1 7.2 58 81-142 19-84 (195)
200 PLN03064 alpha,alpha-trehalose 90.4 0.39 8.4E-06 51.4 5.0 57 83-142 591-663 (934)
201 PLN02575 haloacid dehalogenase 90.2 1.8 3.8E-05 41.8 8.9 88 99-190 216-313 (381)
202 COG0546 Gph Predicted phosphat 89.9 3.4 7.4E-05 36.4 10.1 85 100-188 90-184 (220)
203 PRK09449 dUMP phosphatase; Pro 89.8 2.5 5.4E-05 37.0 9.1 88 99-190 95-193 (224)
204 TIGR03351 PhnX-like phosphonat 89.5 2.9 6.3E-05 36.5 9.3 88 99-189 87-186 (220)
205 TIGR01511 ATPase-IB1_Cu copper 89.5 2.7 6E-05 42.7 10.2 101 82-189 384-489 (562)
206 PRK13226 phosphoglycolate phos 89.0 2.6 5.6E-05 37.4 8.6 87 99-189 95-191 (229)
207 TIGR01491 HAD-SF-IB-PSPlk HAD- 88.9 3.4 7.3E-05 35.3 9.1 88 99-190 80-187 (201)
208 PRK13225 phosphoglycolate phos 88.6 2.8 6.1E-05 38.4 8.8 87 99-189 142-235 (273)
209 TIGR01422 phosphonatase phosph 88.5 3.5 7.6E-05 37.0 9.3 89 98-189 98-197 (253)
210 TIGR01691 enolase-ppase 2,3-di 88.4 1.8 3.8E-05 38.5 7.0 88 98-189 94-192 (220)
211 COG2217 ZntA Cation transport 88.1 14 0.00031 38.7 14.3 92 214-324 528-620 (713)
212 TIGR01497 kdpB K+-transporting 87.9 5.4 0.00012 41.4 11.1 56 83-141 426-485 (675)
213 TIGR02247 HAD-1A3-hyp Epoxide 87.8 2.3 5E-05 36.9 7.4 90 98-189 93-192 (211)
214 PRK13222 phosphoglycolate phos 87.5 6.5 0.00014 34.2 10.2 86 100-189 94-189 (226)
215 KOG2961 Predicted hydrolase (H 87.5 2.1 4.5E-05 35.6 6.2 63 81-143 41-112 (190)
216 TIGR01106 ATPase-IIC_X-K sodiu 87.3 4.4 9.6E-05 44.2 10.6 44 97-143 566-609 (997)
217 KOG2116 Protein involved in pl 87.2 0.98 2.1E-05 45.7 5.0 41 83-123 530-582 (738)
218 PF06189 5-nucleotidase: 5'-nu 87.1 9.8 0.00021 34.5 10.9 69 115-188 36-104 (264)
219 KOG0207 Cation transport ATPas 86.4 32 0.00069 36.7 15.5 42 57-98 551-597 (951)
220 PRK13223 phosphoglycolate phos 85.6 5.6 0.00012 36.3 9.0 86 100-189 102-197 (272)
221 COG3882 FkbH Predicted enzyme 84.6 0.99 2.2E-05 44.2 3.5 49 82-130 221-286 (574)
222 TIGR02254 YjjG/YfnB HAD superf 84.5 6.6 0.00014 34.1 8.6 87 98-189 96-194 (224)
223 PLN02940 riboflavin kinase 84.4 6.3 0.00014 38.0 9.1 87 100-190 94-191 (382)
224 PRK13478 phosphonoacetaldehyde 84.3 9.4 0.0002 34.6 9.8 88 99-189 101-199 (267)
225 COG0474 MgtA Cation transport 83.8 8.6 0.00019 41.6 10.6 46 97-145 545-590 (917)
226 PRK09456 ?-D-glucose-1-phospha 82.6 5.4 0.00012 34.3 7.2 87 99-189 84-181 (199)
227 TIGR01517 ATPase-IIB_Ca plasma 82.3 11 0.00023 41.0 10.7 50 92-144 572-621 (941)
228 KOG3189 Phosphomannomutase [Li 81.5 2.2 4.9E-05 37.0 4.1 52 85-143 13-65 (252)
229 PF12710 HAD: haloacid dehalog 81.3 1.6 3.5E-05 36.9 3.4 13 86-98 1-13 (192)
230 KOG4549 Magnesium-dependent ph 81.0 9.2 0.0002 30.8 7.1 42 100-143 45-86 (144)
231 TIGR01523 ATPase-IID_K-Na pota 80.9 18 0.00038 39.9 11.7 43 97-142 644-686 (1053)
232 PRK15122 magnesium-transportin 80.6 14 0.0003 40.0 10.7 48 92-142 543-590 (903)
233 COG4850 Uncharacterized conser 80.4 4.7 0.0001 37.7 6.1 59 85-143 163-241 (373)
234 PF05761 5_nucleotid: 5' nucle 80.3 1.9 4E-05 42.5 3.8 40 291-330 284-324 (448)
235 PLN02811 hydrolase 80.3 9.8 0.00021 33.3 8.1 89 97-189 76-180 (220)
236 TIGR01647 ATPase-IIIA_H plasma 80.3 13 0.00028 39.4 10.2 48 92-142 435-482 (755)
237 PRK10517 magnesium-transportin 80.2 9.2 0.0002 41.3 9.2 43 97-142 548-590 (902)
238 TIGR01548 HAD-SF-IA-hyp1 haloa 79.6 16 0.00034 31.3 9.0 49 100-151 107-155 (197)
239 TIGR01524 ATPase-IIIB_Mg magne 79.4 20 0.00044 38.6 11.4 48 92-142 508-555 (867)
240 COG1011 Predicted hydrolase (H 78.7 15 0.00033 31.9 8.8 85 100-189 100-195 (229)
241 PF06189 5-nucleotidase: 5'-nu 78.6 4.3 9.4E-05 36.8 5.2 60 85-144 123-215 (264)
242 COG3700 AphA Acid phosphatase 78.1 11 0.00023 32.4 7.0 38 104-141 119-157 (237)
243 TIGR01652 ATPase-Plipid phosph 78.1 36 0.00078 37.5 13.1 48 92-142 624-671 (1057)
244 COG0637 Predicted phosphatase/ 77.9 15 0.00033 32.4 8.6 92 96-190 83-183 (221)
245 TIGR01672 AphA HAD superfamily 77.7 13 0.00029 33.3 8.2 115 70-189 48-207 (237)
246 TIGR01512 ATPase-IB2_Cd heavy 77.3 9.7 0.00021 38.5 8.0 100 84-189 343-448 (536)
247 KOG3120 Predicted haloacid deh 77.0 4 8.7E-05 36.1 4.4 13 85-97 15-27 (256)
248 PLN02919 haloacid dehalogenase 75.9 18 0.00039 39.9 10.0 87 101-191 163-260 (1057)
249 PLN02779 haloacid dehalogenase 75.8 12 0.00026 34.5 7.6 87 100-190 145-243 (286)
250 COG3700 AphA Acid phosphatase 75.6 2.5 5.3E-05 36.1 2.6 26 304-330 186-211 (237)
251 COG2217 ZntA Cation transport 75.2 13 0.00028 39.0 8.3 97 85-188 519-621 (713)
252 PLN02177 glycerol-3-phosphate 74.2 1.4 3.1E-05 43.9 1.1 20 83-102 22-41 (497)
253 PF04312 DUF460: Protein of un 73.5 13 0.00028 30.3 6.2 54 85-141 45-101 (138)
254 TIGR01549 HAD-SF-IA-v1 haloaci 73.5 37 0.0008 27.4 9.3 27 99-125 64-90 (154)
255 PLN02954 phosphoserine phospha 72.7 8.2 0.00018 33.7 5.5 65 75-142 4-124 (224)
256 PLN03190 aminophospholipid tra 72.4 82 0.0018 35.3 14.0 47 92-141 719-765 (1178)
257 TIGR01657 P-ATPase-V P-type AT 71.9 51 0.0011 36.3 12.3 50 92-144 649-698 (1054)
258 PF01740 STAS: STAS domain; I 71.8 4.9 0.00011 31.3 3.4 64 83-151 48-113 (117)
259 TIGR01993 Pyr-5-nucltdase pyri 69.1 20 0.00044 30.2 7.0 84 99-189 84-181 (184)
260 PRK10725 fructose-1-P/6-phosph 69.1 26 0.00057 29.4 7.7 87 98-190 87-183 (188)
261 PRK11133 serB phosphoserine ph 68.1 32 0.0007 32.4 8.6 86 99-189 181-287 (322)
262 COG5610 Predicted hydrolase (H 67.7 3.1 6.6E-05 40.7 1.6 45 283-327 155-199 (635)
263 TIGR02886 spore_II_AA anti-sig 66.2 16 0.00034 27.8 5.2 56 82-142 38-93 (106)
264 TIGR01489 DKMTPPase-SF 2,3-dik 66.1 15 0.00033 30.7 5.6 49 98-149 71-119 (188)
265 PRK11033 zntA zinc/cadmium/mer 66.0 19 0.0004 38.1 7.2 100 82-189 547-651 (741)
266 cd07041 STAS_RsbR_RsbS_like Su 65.5 17 0.00037 27.7 5.4 57 82-143 40-96 (109)
267 PRK10748 flavin mononucleotide 65.1 27 0.00059 31.0 7.3 79 101-189 115-204 (238)
268 PRK06698 bifunctional 5'-methy 64.9 14 0.00031 36.4 5.9 48 100-150 331-378 (459)
269 PRK10563 6-phosphogluconate ph 64.1 40 0.00087 29.2 8.1 83 100-189 89-182 (221)
270 TIGR00377 ant_ant_sig anti-ant 63.5 21 0.00045 27.1 5.5 56 82-142 42-97 (108)
271 TIGR01544 HAD-SF-IE haloacid d 63.3 24 0.00052 32.5 6.6 42 98-142 120-161 (277)
272 TIGR02990 ectoine_eutA ectoine 63.0 43 0.00093 30.1 8.1 40 212-255 180-219 (239)
273 cd06844 STAS Sulphate Transpor 62.3 17 0.00037 27.4 4.7 56 82-142 38-93 (100)
274 cd07043 STAS_anti-anti-sigma_f 61.9 20 0.00043 26.4 5.0 55 83-142 38-92 (99)
275 TIGR01488 HAD-SF-IB Haloacid D 60.1 23 0.00049 29.4 5.5 40 100-142 74-113 (177)
276 KOG2470 Similar to IMP-GMP spe 59.0 38 0.00083 32.2 7.0 37 293-329 337-374 (510)
277 PRK10671 copA copper exporting 58.0 59 0.0013 34.9 9.4 102 82-189 629-735 (834)
278 PLN02645 phosphoglycolate phos 57.8 1E+02 0.0023 28.6 10.0 88 227-327 46-135 (311)
279 TIGR01658 EYA-cons_domain eyes 57.5 28 0.0006 31.5 5.6 46 283-331 213-258 (274)
280 PLN02499 glycerol-3-phosphate 55.9 6.6 0.00014 39.0 1.7 21 83-103 8-28 (498)
281 PF06437 ISN1: IMP-specific 5' 54.3 44 0.00095 32.1 6.7 32 299-332 366-401 (408)
282 PRK09552 mtnX 2-hydroxy-3-keto 54.2 16 0.00035 31.9 3.7 38 99-139 74-111 (219)
283 PRK11590 hypothetical protein; 54.0 27 0.00058 30.4 5.1 39 99-141 95-135 (211)
284 COG1167 ARO8 Transcriptional r 52.1 2.3E+02 0.005 28.0 11.9 64 129-192 138-206 (459)
285 KOG0207 Cation transport ATPas 51.9 45 0.00098 35.6 6.9 60 81-143 701-764 (951)
286 KOG2914 Predicted haloacid-hal 49.2 32 0.0007 30.6 4.8 39 94-132 87-125 (222)
287 PRK13582 thrH phosphoserine ph 46.7 45 0.00098 28.4 5.4 39 100-142 69-107 (205)
288 TIGR02137 HSK-PSP phosphoserin 46.5 46 0.001 28.9 5.4 39 99-142 68-107 (203)
289 PRK01122 potassium-transportin 46.0 48 0.001 34.7 6.1 95 83-188 425-529 (679)
290 PRK14010 potassium-transportin 45.7 45 0.00097 34.8 5.9 81 97-188 439-525 (673)
291 COG2216 KdpB High-affinity K+ 44.5 3.2E+02 0.007 27.7 11.1 173 82-325 298-487 (681)
292 PRK08508 biotin synthase; Prov 44.5 2.5E+02 0.0054 25.6 11.1 39 103-143 76-115 (279)
293 KOG0206 P-type ATPase [General 43.0 49 0.0011 36.6 5.8 47 275-325 766-816 (1151)
294 PHA02597 30.2 hypothetical pro 42.7 1.9E+02 0.0042 24.3 8.7 87 99-190 74-171 (197)
295 TIGR01545 YfhB_g-proteo haloac 42.4 38 0.00082 29.6 4.2 19 83-101 5-23 (210)
296 COG1366 SpoIIAA Anti-anti-sigm 42.2 55 0.0012 25.5 4.7 57 82-143 43-99 (117)
297 TIGR03333 salvage_mtnX 2-hydro 38.3 67 0.0015 27.8 5.2 40 98-140 69-108 (214)
298 PRK08238 hypothetical protein; 36.5 86 0.0019 31.3 6.1 39 100-141 73-111 (479)
299 PRK14010 potassium-transportin 35.5 2.1E+02 0.0046 29.9 8.9 91 216-324 434-524 (673)
300 COG2099 CobK Precorrin-6x redu 35.5 3.5E+02 0.0075 24.7 10.6 38 290-330 187-229 (257)
301 TIGR02329 propionate_PrpR prop 35.4 2.3E+02 0.0051 28.6 9.0 26 305-332 147-172 (526)
302 TIGR02244 HAD-IG-Ncltidse HAD 35.2 19 0.00042 34.2 1.2 27 227-253 186-212 (343)
303 PF01993 MTD: methylene-5,6,7, 34.4 3.1E+02 0.0067 24.8 8.4 86 211-330 28-115 (276)
304 KOG3107 Predicted haloacid deh 33.3 1.4E+02 0.003 28.9 6.4 41 288-330 411-451 (468)
305 COG0548 ArgB Acetylglutamate k 33.1 1.1E+02 0.0024 27.9 5.8 59 83-145 2-60 (265)
306 KOG4166 Thiamine pyrophosphate 33.0 1.1E+02 0.0024 30.1 5.8 34 81-119 539-572 (675)
307 PF06014 DUF910: Bacterial pro 32.8 30 0.00065 24.2 1.6 24 292-320 8-31 (62)
308 COG0602 NrdG Organic radical a 32.5 1.1E+02 0.0025 26.8 5.6 52 75-126 57-110 (212)
309 PRK11660 putative transporter; 31.5 92 0.002 31.7 5.5 67 81-153 489-557 (568)
310 PF11848 DUF3368: Domain of un 31.2 88 0.0019 20.4 3.6 32 99-139 16-47 (48)
311 PF06117 DUF957: Enterobacteri 30.1 18 0.0004 25.2 0.1 28 84-111 25-52 (65)
312 KOG1615 Phosphoserine phosphat 29.7 1.4E+02 0.003 26.2 5.4 65 75-143 8-129 (227)
313 COG2897 SseA Rhodanese-related 29.5 83 0.0018 29.1 4.4 49 284-333 71-125 (285)
314 KOG2469 IMP-GMP specific 5'-nu 29.1 26 0.00057 33.8 1.0 48 282-329 284-332 (424)
315 cd01445 TST_Repeats Thiosulfat 28.2 1.8E+02 0.0038 23.5 5.7 49 284-332 76-131 (138)
316 COG3727 Vsr DNA G:T-mismatch r 28.2 98 0.0021 25.2 3.9 68 2-100 5-73 (150)
317 COG0547 TrpD Anthranilate phos 28.0 3.7E+02 0.0079 25.6 8.4 57 88-144 78-134 (338)
318 PRK05752 uroporphyrinogen-III 27.8 4.4E+02 0.0095 23.5 12.7 24 304-330 212-235 (255)
319 COG0263 ProB Glutamate 5-kinas 27.5 5.6E+02 0.012 24.6 11.1 106 104-252 33-141 (369)
320 PF09547 Spore_IV_A: Stage IV 27.4 98 0.0021 30.5 4.5 59 85-143 148-212 (492)
321 TIGR03278 methan_mark_10 putat 27.4 1.4E+02 0.003 29.1 5.7 54 89-142 73-130 (404)
322 cd07042 STAS_SulP_like_sulfate 27.1 87 0.0019 23.2 3.6 54 83-142 41-95 (107)
323 KOG0202 Ca2+ transporting ATPa 27.1 5E+02 0.011 28.1 9.7 58 84-147 572-629 (972)
324 PRK10494 hypothetical protein; 27.1 2.4E+02 0.0052 25.6 6.9 54 228-309 107-160 (259)
325 TIGR01494 ATPase_P-type ATPase 27.0 1.5E+02 0.0032 29.5 6.1 57 82-141 326-386 (499)
326 PF13756 Stimulus_sens_1: Stim 26.4 45 0.00098 26.1 1.8 20 82-101 18-38 (112)
327 TIGR00343 pyridoxal 5'-phospha 26.3 1.4E+02 0.003 27.6 5.1 45 286-334 184-232 (287)
328 cd06591 GH31_xylosidase_XylS X 26.1 2.2E+02 0.0047 26.6 6.7 42 82-123 39-87 (319)
329 cd06595 GH31_xylosidase_XylS-l 25.3 1.6E+02 0.0035 27.1 5.6 42 82-123 40-95 (292)
330 KOG3085 Predicted hydrolase (H 25.0 82 0.0018 28.3 3.4 50 99-152 113-162 (237)
331 PRK00994 F420-dependent methyl 24.5 5.3E+02 0.011 23.3 10.6 86 211-330 29-116 (277)
332 PRK04180 pyridoxal biosynthesi 24.5 1.8E+02 0.004 26.9 5.6 47 284-334 188-238 (293)
333 PRK01122 potassium-transportin 23.8 3E+02 0.0064 28.9 7.6 81 229-325 449-529 (679)
334 PF01282 Ribosomal_S24e: Ribos 23.1 1.2E+02 0.0025 22.5 3.4 26 284-309 9-37 (84)
335 COG4229 Predicted enolase-phos 22.7 91 0.002 27.0 3.0 38 86-123 82-127 (229)
336 KOG0203 Na+/K+ ATPase, alpha s 22.3 6.4E+02 0.014 27.3 9.5 55 84-141 563-629 (1019)
337 PF12694 MoCo_carrier: Putativ 22.1 71 0.0015 26.4 2.2 35 88-122 62-97 (145)
338 PRK15108 biotin synthase; Prov 21.8 6.9E+02 0.015 23.6 11.6 38 102-142 111-148 (345)
339 PF06506 PrpR_N: Propionate ca 21.6 2.2E+02 0.0047 23.9 5.3 59 269-333 92-153 (176)
340 smart00852 MoCF_biosynth Proba 21.4 1.2E+02 0.0026 24.1 3.5 32 288-320 20-51 (135)
341 cd01766 Ufm1 Urm1-like ubiquit 21.4 1.2E+02 0.0026 21.9 2.9 39 284-323 25-63 (82)
342 PLN02588 glycerol-3-phosphate 21.3 57 0.0012 32.7 1.8 21 83-103 50-70 (525)
343 TIGR00815 sulP high affinity s 21.2 1E+02 0.0022 31.4 3.6 55 83-142 494-548 (563)
344 COG2433 Uncharacterized conser 21.0 2.8E+02 0.0061 28.5 6.4 54 85-141 257-313 (652)
345 PF09587 PGA_cap: Bacterial ca 20.9 3.7E+02 0.0079 23.9 6.9 69 74-142 28-107 (250)
346 TIGR03840 TMPT_Se_Te thiopurin 20.7 3.9E+02 0.0085 23.3 6.9 45 284-329 17-62 (213)
347 cd06598 GH31_transferase_CtsZ 20.7 3.5E+02 0.0077 25.1 7.0 42 82-123 39-91 (317)
348 PF09506 Salt_tol_Pase: Glucos 20.6 1.3E+02 0.0028 28.6 3.8 58 85-142 4-65 (381)
349 cd00733 GlyRS_alpha_core Class 20.5 84 0.0018 28.5 2.4 42 284-325 80-127 (279)
350 cd04727 pdxS PdxS is a subunit 20.2 2.6E+02 0.0056 25.9 5.6 45 285-333 180-228 (283)
No 1
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-43 Score=314.50 Aligned_cols=258 Identities=58% Similarity=0.934 Sum_probs=235.4
Q ss_pred ccHHHHhhcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC-CCcCcEEecH
Q 019928 74 KNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASS 152 (334)
Q Consensus 74 ~~~~~~~~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~-~~~~~i~~~~ 152 (334)
+...+++.++++|+||+|||||.+++.+|++.+++..|++.|+.+.|+|||+.++++++.++++.+|+. +..++++++.
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa 92 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSA 92 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChH
Confidence 456778999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcc-cCCCCCccEEEEEecCCCCHHHHH
Q 019928 153 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFL-MEHDKDVGAVVVGFDRYFNYYKVQ 231 (334)
Q Consensus 153 ~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vv~~~~~~~~~~~l~ 231 (334)
.+.+.|+++.. ..++++|++|.+++.++|+++|++...++++....--..+..+ ...+.+++||+++.|..++|.++.
T Consensus 93 ~~~a~ylk~~~-~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~~~~~~~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL~ 171 (306)
T KOG2882|consen 93 YAIADYLKKRK-PFGKKVYVIGEEGIREELDEAGFEYFGGGPDGKDTDGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKLM 171 (306)
T ss_pred HHHHHHHHHhC-cCCCeEEEecchhhhHHHHHcCceeecCCCCcccccccccchhhcCCCCCCCEEEEecccccCHHHHH
Confidence 99999998877 4568999999999999999999998877666544411111111 122677999999999999999999
Q ss_pred HHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccC
Q 019928 232 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR 311 (334)
Q Consensus 232 ~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs 311 (334)
.++..|+ ++++.|++||.|.+.|...+..++|.|+++.++..++++++.+.|||++.+++.+.++++++|++++||||+
T Consensus 172 kA~~yLq-nP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDR 250 (306)
T KOG2882|consen 172 KALNYLQ-NPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDR 250 (306)
T ss_pred HHHHHhC-CCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEccc
Confidence 9988886 799999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHcCCcEEEEcccc
Q 019928 312 LDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 312 ~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+++||..|++.|++|++|+||.
T Consensus 251 L~TDIlFG~~~G~~TLLvltGv 272 (306)
T KOG2882|consen 251 LDTDILFGKNCGFKTLLVLSGV 272 (306)
T ss_pred chhhhhHhhccCcceEEEecCc
Confidence 9999999999999999999995
No 2
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-42 Score=309.41 Aligned_cols=236 Identities=42% Similarity=0.660 Sum_probs=217.2
Q ss_pred HHhhcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCcCcEEecHHHHH
Q 019928 78 ELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAA 156 (334)
Q Consensus 78 ~~~~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~-lGl~~~~~~i~~~~~~~~ 156 (334)
+.+.+|++++||+||||+++.+.+|+|.++|+.|+++|+++.++|||++++++.+.++|.. .|++..++++++|+.+.+
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~ 82 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATA 82 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999988 777899999999999999
Q ss_pred HHHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHh
Q 019928 157 AYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLC 236 (334)
Q Consensus 157 ~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~ 236 (334)
+|+.+..- .++++++|.+++.+++...|+.+....+. ..+++|+++.|+..+|+++.+++..
T Consensus 83 ~~l~~~~~--~~kv~viG~~~l~~~l~~~G~~~~~~~~~----------------~~~d~Vv~g~d~~~~~e~l~~a~~~ 144 (269)
T COG0647 83 DYLAKQKP--GKKVYVIGEEGLKEELEGAGFELVDEEEP----------------ARVDAVVVGLDRTLTYEKLAEALLA 144 (269)
T ss_pred HHHHhhCC--CCEEEEECCcchHHHHHhCCcEEeccCCC----------------CcccEEEEecCCCCCHHHHHHHHHH
Confidence 99987543 27899999999999999999987532110 1258999999999999999999999
Q ss_pred HHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHH
Q 019928 237 IRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDI 316 (334)
Q Consensus 237 l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI 316 (334)
+++ |.++||||+|..++...+ ..+|.|+++..++.++|+++...|||++.+|+.+++.++..+++++||||++++||
T Consensus 145 i~~--g~~fI~tNpD~~~p~~~g-~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI 221 (269)
T COG0647 145 IAA--GAPFIATNPDLTVPTERG-LRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDI 221 (269)
T ss_pred HHc--CCcEEEeCCCccccCCCC-CccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhH
Confidence 884 799999999999987777 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEEccccC
Q 019928 317 LFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 317 ~~a~~aG~~tv~V~tG~~ 334 (334)
.+|+++||.|++|+||++
T Consensus 222 ~~a~~~G~~t~LV~TGv~ 239 (269)
T COG0647 222 LGAKAAGLDTLLVLTGVS 239 (269)
T ss_pred HHHHHcCCCEEEEccCCC
Confidence 999999999999999974
No 3
>PLN02645 phosphoglycolate phosphatase
Probab=100.00 E-value=2.3e-40 Score=309.30 Aligned_cols=267 Identities=90% Similarity=1.401 Sum_probs=234.6
Q ss_pred cccCCCccHHHHhhcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCc
Q 019928 68 ASAQPLKNADELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEE 147 (334)
Q Consensus 68 ~~~~~~~~~~~~~~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~ 147 (334)
+...+.....+++.++|+|+||+|||||++++.++++.++|++|+++|++++++||++.+++.++.++|+.+|++...++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~ 92 (311)
T PLN02645 13 AQLLTLENADELIDSVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE 92 (311)
T ss_pred cccCCHHHHHHHHHhCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 34555677888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecHHHHHHHHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCH
Q 019928 148 IFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNY 227 (334)
Q Consensus 148 i~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~ 227 (334)
++++......+++..++..+++++++|..++.+.+++.|+....+..+........+....+.++++++|+++.++.++|
T Consensus 93 I~ts~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~g~~~~~~~~~~~~~~~~~~~~~i~aVvvg~d~~~~~ 172 (311)
T PLN02645 93 IFSSSFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLGGPEDGDKKIELKPGFLMEHDKDVGAVVVGFDRYINY 172 (311)
T ss_pred EeehHHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEecCccccccccccccccccccCCCCCEEEEecCCCCCH
Confidence 99999999999988766555679999999999999999998876555443333333333334456679999999999999
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+++..+...++.++|..+|+||+|..++.......++.++++..+..+++.++...|||+|.+|..+++++|+++++++|
T Consensus 173 ~~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~ 252 (311)
T PLN02645 173 YKIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICM 252 (311)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEE
Confidence 99999998887667999999999997765566678899999999999999998888999999999999999999999999
Q ss_pred EccCchhHHHHHHHcCCcEEEEccccC
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
|||++.+||++|+++|+++|+|+||.+
T Consensus 253 VGD~~~~Di~~A~~aG~~~ilV~~G~~ 279 (311)
T PLN02645 253 VGDRLDTDILFGQNGGCKTLLVLSGVT 279 (311)
T ss_pred EcCCcHHHHHHHHHcCCCEEEEcCCCC
Confidence 999987999999999999999999963
No 4
>PRK10444 UMP phosphatase; Provisional
Probab=100.00 E-value=6.3e-38 Score=283.33 Aligned_cols=223 Identities=32% Similarity=0.536 Sum_probs=205.3
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHhC
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSI 162 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~~ 162 (334)
+|+|+||+|||||++++.+|++.+++++|++.|++++++||++.++..++.++|+.+|+++..++++++..+..+|+.+.
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~ 80 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ 80 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHhHHcCCC
Q 019928 163 DFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPG 242 (334)
Q Consensus 163 ~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~l~~~~g 242 (334)
. +++++++|..++.+++...|+... ++++++|+++.+..++|.++..+...++ +|
T Consensus 81 ~---~~~v~~~g~~~l~~~l~~~g~~~~--------------------~~~~~~Vvvg~~~~~~~~~l~~a~~~l~--~g 135 (248)
T PRK10444 81 E---GKKAYVIGEGALIHELYKAGFTIT--------------------DINPDFVIVGETRSYNWDMMHKAAYFVA--NG 135 (248)
T ss_pred C---CCEEEEEcCHHHHHHHHHCcCEec--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CC
Confidence 3 366999999999999999998752 2356799999999999999999988886 59
Q ss_pred cEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHc
Q 019928 243 CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (334)
Q Consensus 243 ~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a 322 (334)
..++++|+|...+ ...++.|+++..++++.++++...|||+|++|+.+++++++++++|+||||++.+||++|+++
T Consensus 136 ~~~i~~n~D~~~~----g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~ 211 (248)
T PRK10444 136 ARFIATNPDTHGR----GFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQA 211 (248)
T ss_pred CEEEEECCCCCCC----CCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHc
Confidence 9999999999543 367899999999999999999889999999999999999999999999999987999999999
Q ss_pred CCcEEEEccccC
Q 019928 323 GCKTLLVLSGKW 334 (334)
Q Consensus 323 G~~tv~V~tG~~ 334 (334)
|+++++|.||.+
T Consensus 212 G~~~vlV~~G~~ 223 (248)
T PRK10444 212 GLETILVLSGVS 223 (248)
T ss_pred CCCEEEECCCCC
Confidence 999999999964
No 5
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=100.00 E-value=1e-37 Score=287.48 Aligned_cols=251 Identities=46% Similarity=0.798 Sum_probs=215.9
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHh
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKS 161 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~ 161 (334)
++|+|+||+||||+++.+.++++.++|++|+++|+++.++||++.+++.++..+++.+|++...++++++..+...|+++
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~l~~ 80 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALCAARLLRQ 80 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHhHHcCC
Q 019928 162 IDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENP 241 (334)
Q Consensus 162 ~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~l~~~~ 241 (334)
.... +++++++|.+.+.+.+++.|+.+...+++........+......++++++|+++.+..++|+.+.+++..++. +
T Consensus 81 ~~~~-~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vvv~~d~~~~y~~i~~~l~~L~~-~ 158 (279)
T TIGR01452 81 PPDA-PKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGAAPRGSGAFMKLEENVGAVVVGYDEHFSYAKLREACAHLRE-P 158 (279)
T ss_pred hCcC-CCEEEEEcCHHHHHHHHHCCCEEecCcccccccchhhcccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhc-C
Confidence 5332 3679999999999999999998765544422211111111222345789999999999999999999999875 5
Q ss_pred CcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHH
Q 019928 242 GCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 321 (334)
Q Consensus 242 g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~ 321 (334)
|..+++||++...+......+++.+.++..+..+++.+....|||+|++|+++++++|++|++|+||||++.+||++|++
T Consensus 159 g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~ 238 (279)
T TIGR01452 159 GCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHR 238 (279)
T ss_pred CCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHH
Confidence 77899999998776555556778889999999989988888999999999999999999999999999996699999999
Q ss_pred cCCcEEEEccccC
Q 019928 322 GGCKTLLVLSGKW 334 (334)
Q Consensus 322 aG~~tv~V~tG~~ 334 (334)
+|+++|+|+||.+
T Consensus 239 aGi~si~V~~G~~ 251 (279)
T TIGR01452 239 CGMTTVLVLSGVS 251 (279)
T ss_pred cCCcEEEECCCCC
Confidence 9999999999963
No 6
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=100.00 E-value=1.3e-37 Score=282.03 Aligned_cols=226 Identities=32% Similarity=0.545 Sum_probs=207.6
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHhC
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSI 162 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~~ 162 (334)
+|+|+||+||||+++++.++++.++|++|+++|++++++|||++|++.++.++++.+|++...+++++++.+..+|+.+.
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~ 80 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDL 80 (249)
T ss_pred CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHhHHcCCC
Q 019928 163 DFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPG 242 (334)
Q Consensus 163 ~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~l~~~~g 242 (334)
+. +++++++|.+++.+.+...|+... ++++++|+++.++..+|+++..++..+. +|
T Consensus 81 ~~--~~~v~~lg~~~l~~~l~~~g~~~~--------------------~~~~~~Vvvg~~~~~~y~~l~~a~~~l~--~g 136 (249)
T TIGR01457 81 KL--EKTVYVIGEEGLKEAIKEAGYVED--------------------KEKPDYVVVGLDRQIDYEKFATATLAIR--KG 136 (249)
T ss_pred CC--CCEEEEEcChhHHHHHHHcCCEec--------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH--CC
Confidence 43 367999999999999999998652 2357899999999999999999988885 48
Q ss_pred cEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHc
Q 019928 243 CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (334)
Q Consensus 243 ~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a 322 (334)
..++++|+|..++... ...++.|.+...+..+++.+....|||+|++|..+++++++++++++||||++.+||.+|+++
T Consensus 137 ~~~i~tN~D~~~~~~~-~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~ 215 (249)
T TIGR01457 137 AHFIGTNGDLAIPTER-GLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDA 215 (249)
T ss_pred CeEEEECCCCCCCCCC-CCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHc
Confidence 8999999999987544 367899999999999999999889999999999999999999999999999976899999999
Q ss_pred CCcEEEEcccc
Q 019928 323 GCKTLLVLSGK 333 (334)
Q Consensus 323 G~~tv~V~tG~ 333 (334)
|+++++|.||.
T Consensus 216 G~~~v~v~~G~ 226 (249)
T TIGR01457 216 GIDTLLVHTGV 226 (249)
T ss_pred CCcEEEEcCCC
Confidence 99999999995
No 7
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=100.00 E-value=3.5e-34 Score=260.78 Aligned_cols=223 Identities=25% Similarity=0.397 Sum_probs=196.2
Q ss_pred CcEEEEecceeEEeCCe----ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHH
Q 019928 83 VETFIFDCDGVIWKGDK----LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAY 158 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~----~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~ 158 (334)
+|+|+||+||||+++++ .+|++.++|++|+++|++++++||++.+++.++.++++.+|+++.+++++++..+..+|
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~~~~~ 80 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPAARQL 80 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHH
Confidence 57999999999999887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecC-CCCHHHHHHHHHhH
Q 019928 159 LKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDR-YFNYYKVQYGTLCI 237 (334)
Q Consensus 159 l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~-~~~~~~l~~~~~~l 237 (334)
+++.+ .+++++|.+++.+.+. |+. .+++++|+++.+. .++|+++.+++..+
T Consensus 81 l~~~~----~~~~~~g~~~~~~~~~--~~~----------------------~~~~~~Vv~g~~~~~~~y~~l~~a~~~L 132 (257)
T TIGR01458 81 LEEKQ----LRPMLLVDDRVLPDFD--GID----------------------TSDPNCVVMGLAPEHFSYQILNQAFRLL 132 (257)
T ss_pred HHhcC----CCeEEEECccHHHHhc--cCC----------------------CCCCCEEEEecccCccCHHHHHHHHHHH
Confidence 98754 3478888887777764 321 1345799999865 68999999999988
Q ss_pred HcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHH
Q 019928 238 RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDIL 317 (334)
Q Consensus 238 ~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~ 317 (334)
+......++++|.+..++.... ..++.+.+++.+..+++.++...|||+|++|+.+++++|++|++++||||++.+||+
T Consensus 133 ~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~ 211 (257)
T TIGR01458 133 LDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVG 211 (257)
T ss_pred HcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHH
Confidence 8654567899999987764444 567999999999999999988889999999999999999999999999999769999
Q ss_pred HHHHcCCcEEEEccccC
Q 019928 318 FGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 318 ~a~~aG~~tv~V~tG~~ 334 (334)
+|+++|+++|+|.||.+
T Consensus 212 ~a~~~G~~~i~v~~G~~ 228 (257)
T TIGR01458 212 GAQDCGMRGIQVRTGKY 228 (257)
T ss_pred HHHHcCCeEEEECCCCC
Confidence 99999999999999963
No 8
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=100.00 E-value=3.3e-34 Score=257.82 Aligned_cols=234 Identities=37% Similarity=0.545 Sum_probs=203.1
Q ss_pred EEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCcCcEEecHHHHHHHHHhCCC
Q 019928 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASSFAAAAYLKSIDF 164 (334)
Q Consensus 86 viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~-lGl~~~~~~i~~~~~~~~~~l~~~~~ 164 (334)
|+||+||||+++++.+++|.++|+.+++.|+++.++||++++++.++.++|.. +|+++++++++++...+..|+.+..
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~~~~~l~~~~- 79 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQRF- 79 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHHHHHHHHHhC-
Confidence 58999999999999999999999999999999999999999999999999988 8999999999999999999998743
Q ss_pred CCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHhHHcCCCcE
Q 019928 165 PKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCL 244 (334)
Q Consensus 165 ~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~l~~~~g~~ 244 (334)
.+++++++|.+++.++++..|+...... +....+.++.+++|+++.+..++|.++..+...++. ++.+
T Consensus 80 -~~~~v~v~G~~~~~~~l~~~g~~~~~~~----------~~~~~~~~~~~~~vv~~~~~~~~~~~~~~a~~~l~~-~~~~ 147 (236)
T TIGR01460 80 -EGEKVYVIGVGELRESLEGLGFRNDFFD----------DIDHLAIEKIPAAVIVGEPSDFSYDELAKAAYLLAE-GDVP 147 (236)
T ss_pred -CCCEEEEECCHHHHHHHHHcCCcCcccC----------cccccccCCCCeEEEECCCCCcCHHHHHHHHHHHhC-CCCe
Confidence 2356999999999999999997520000 000111234467899999999999999988888863 3389
Q ss_pred EEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE-EEEccCchhHHHHHHHcC
Q 019928 245 FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI-CMVGDRLDTDILFGQNGG 323 (334)
Q Consensus 245 ~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev-i~VGDs~~~DI~~a~~aG 323 (334)
++++|+|...+...+...++.+++++.+..+.+.+....+||+|.+|+.++++++++++++ +||||++.+||++|+++|
T Consensus 148 ~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G 227 (236)
T TIGR01460 148 FIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAG 227 (236)
T ss_pred EEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCC
Confidence 9999998767666667889999999999999999988889999999999999999999997 999999978999999999
Q ss_pred CcEEEEccc
Q 019928 324 CKTLLVLSG 332 (334)
Q Consensus 324 ~~tv~V~tG 332 (334)
+++|+|+||
T Consensus 228 ~~~i~v~~G 236 (236)
T TIGR01460 228 FDTLLVLTG 236 (236)
T ss_pred CcEEEEecC
Confidence 999999997
No 9
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=100.00 E-value=6e-34 Score=267.12 Aligned_cols=245 Identities=22% Similarity=0.286 Sum_probs=199.8
Q ss_pred EEEEecceeEEeCCeecCCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCcCcEEecHHHHHHHH
Q 019928 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAYL 159 (334)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~a~~aL~~L~~~----G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~~~~~i~~~~~~~~~~l 159 (334)
+|+||||||||+++.+++++.++++.|+.. |+++.++||++++++.++.+++ +.+|+++..++++++..++..++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~~~~~~ll 81 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSHSPYKSLV 81 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhhHHHHHHH
Confidence 689999999999999999999999999998 9999999999999999999988 89999999999999988777777
Q ss_pred HhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCc---------------cc-CCCCCccEEEEEecC
Q 019928 160 KSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGF---------------LM-EHDKDVGAVVVGFDR 223 (334)
Q Consensus 160 ~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~~~vv~~~~~ 223 (334)
+.. .++++++|...+.+.+...|+......++.....+ .+.. .. ....++++|+++.+.
T Consensus 82 ~~~----~~~v~viG~~~~~~~l~~~G~~~vv~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVvv~~d~ 156 (321)
T TIGR01456 82 NKY----EKRILAVGTGSVRGVAEGYGFQNVVHQDEIVRYFR-DIDPFSGMSDEQVREYSRDIPDLTTKRFDAVLVFNDP 156 (321)
T ss_pred HHc----CCceEEEeChHHHHHHHHcCCcccccHHHHHhcCC-CCCcccccCHHHhhcccccccccCCCceeEEEEecCc
Confidence 543 13689999999999999999875332122111111 0000 00 012468999999998
Q ss_pred CCCHHHHHHHHHhHHcC---------CCcEEEEecCCcccccccchhccccchHHHHhHh----hcCCcc--cccCCCCH
Q 019928 224 YFNYYKVQYGTLCIREN---------PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----STQREP--LVVGKPST 288 (334)
Q Consensus 224 ~~~~~~l~~~~~~l~~~---------~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~----~~~~~~--~~~gKP~~ 288 (334)
..++.+++.+...++.. +.+.++++|+|..++...+..+++.|++..++.. +++.+. ..+|||++
T Consensus 157 ~~~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~ 236 (321)
T TIGR01456 157 VDWAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTK 236 (321)
T ss_pred hHHhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCCh
Confidence 88888888888888752 2378999999999987766558999999999987 567653 67899999
Q ss_pred HHHHHHHHHh--------CC-----CCCcEEEEccCchhHHHHHHHcCCcEEEEccccC
Q 019928 289 FMMDYLANKF--------GI-----QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 289 ~~~~~~~~~l--------gi-----~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
.+|+.+++.+ ++ ++++++||||++.+||.+|+++|+.+|+|+||+|
T Consensus 237 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~ 295 (321)
T TIGR01456 237 LTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVY 295 (321)
T ss_pred HHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccccc
Confidence 9999999988 44 4579999999999999999999999999999975
No 10
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=232.54 Aligned_cols=225 Identities=30% Similarity=0.489 Sum_probs=202.2
Q ss_pred hcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHH
Q 019928 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLK 160 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~ 160 (334)
..++++++|+-|||++++..+|++.++++.|+..+..+.|+||.+..|...+.++|..+|+++++++++++..++.+|++
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~ 84 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLE 84 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEec-CCCCHHHHHHHHHhHHc
Q 019928 161 SIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD-RYFNYYKVQYGTLCIRE 239 (334)
Q Consensus 161 ~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~-~~~~~~~l~~~~~~l~~ 239 (334)
+..+. .+++-.++.++.+. |+. -..+.+||+|.. +.++|..+..+++.|.+
T Consensus 85 ~~~lr----P~l~v~d~a~~dF~--gid----------------------Ts~pn~VViglape~F~y~~ln~AFrvL~e 136 (262)
T KOG3040|consen 85 ENQLR----PYLIVDDDALEDFD--GID----------------------TSDPNCVVIGLAPEGFSYQRLNRAFRVLLE 136 (262)
T ss_pred hcCCC----ceEEEcccchhhCC--Ccc----------------------CCCCCeEEEecCcccccHHHHHHHHHHHHc
Confidence 87653 55665666666553 332 135779999975 56899999999999999
Q ss_pred CCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHH
Q 019928 240 NPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG 319 (334)
Q Consensus 240 ~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a 319 (334)
.+...+|+-+..+.+...++ ...+.|.++.+++++++.+..+.|||+|..|+.+++.+|++|++++||||+...|+-+|
T Consensus 137 ~~k~~LIai~kgryykr~~G-l~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGA 215 (262)
T KOG3040|consen 137 MKKPLLIAIGKGRYYKRVDG-LCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGA 215 (262)
T ss_pred CCCCeEEEecCceeeeeccc-cccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhH
Confidence 88899999998887654444 57789999999999999999999999999999999999999999999999998999999
Q ss_pred HHcCCcEEEEccccC
Q 019928 320 QNGGCKTLLVLSGKW 334 (334)
Q Consensus 320 ~~aG~~tv~V~tG~~ 334 (334)
++.||+.|+|.||||
T Consensus 216 q~~GMrgilVkTGK~ 230 (262)
T KOG3040|consen 216 QACGMRGILVKTGKF 230 (262)
T ss_pred hhhcceeEEeecccc
Confidence 999999999999998
No 11
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.97 E-value=4.6e-29 Score=225.37 Aligned_cols=232 Identities=22% Similarity=0.241 Sum_probs=183.6
Q ss_pred HHHhhcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CcCcEEecHHHH
Q 019928 77 DELIDSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASSFAA 155 (334)
Q Consensus 77 ~~~~~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~-~~~~i~~~~~~~ 155 (334)
.++++++++|+||+||||+++.+++|++.++|++|++.|+++.++||+ +++...+.++++.+|++. ..+.++++....
T Consensus 2 ~~~~~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~ 80 (242)
T TIGR01459 2 FDLINDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSGEIA 80 (242)
T ss_pred hhhhhcCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccHHHH
Confidence 356789999999999999999999999999999999999999999995 567777778899999998 778999998776
Q ss_pred HHHHHhC----CCCCCcEEEEEeCcch-HHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEec--CCCCHH
Q 019928 156 AAYLKSI----DFPKDKKVYVVGEDGI-LKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFD--RYFNYY 228 (334)
Q Consensus 156 ~~~l~~~----~~~~~~~~~~~G~~~~-~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~--~~~~~~ 228 (334)
..++... +.. .++++++|.... .+.+...+.... ....++++|+++.+ ..++|+
T Consensus 81 ~~~l~~~~~~~~~~-~~~~~~vGd~~~d~~~~~~~~~~~~------------------~~~~~~~~vvv~~~~~~~~~~~ 141 (242)
T TIGR01459 81 VQMILESKKRFDIR-NGIIYLLGHLENDIINLMQCYTTDD------------------ENKANASLITIYRSENEKLDLD 141 (242)
T ss_pred HHHHHhhhhhccCC-CceEEEeCCcccchhhhcCCCcccc------------------CCcccCcEEEEcCCCcccCCHH
Confidence 6666532 221 255788887543 444443333210 01234667888755 447899
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCC-CCcEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQICM 307 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~-~~evi~ 307 (334)
.+.+++..+.+ +|.++++||++..++. .....++.+.++..+.. .+.+....|||+|++|+.+++++|.. +++|+|
T Consensus 142 ~~~~~l~~l~~-~g~~~i~tN~d~~~~~-~~~~~~~~g~~~~~i~~-~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 142 EFDELFAPIVA-RKIPNICANPDRGINQ-HGIYRYGAGYYAELIKQ-LGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHh-CCCcEEEECCCEeccC-CCceEecccHHHHHHHH-hCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 99888887754 5888899999998764 34567888888888766 45566678999999999999999975 679999
Q ss_pred EccCchhHHHHHHHcCCcEEEEcc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
|||++.+||++|+++|+++++|+|
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEeC
Confidence 999955999999999999999986
No 12
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=99.87 E-value=1.4e-21 Score=175.15 Aligned_cols=247 Identities=23% Similarity=0.277 Sum_probs=198.3
Q ss_pred cEEEEecceeEEeCCeecCCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCcCcEEecHHHHHHH
Q 019928 84 ETFIFDCDGVIWKGDKLIDGVPETLDMLRSK----GKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAAY 158 (334)
Q Consensus 84 k~viFDiDGTL~d~~~~~~~a~~aL~~L~~~----G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~~~~~i~~~~~~~~~~ 158 (334)
=+|.|||||||+.+++.++++.++++.|..+ .+|++++||.++.+...-++.| ..+|+++++++++.++.+...+
T Consensus 36 fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHsP~r~l 115 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHSPFRLL 115 (389)
T ss_pred eeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcChHHHH
Confidence 3899999999999999999999999999988 8999999999999988888888 7899999999999999887766
Q ss_pred HHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCccc------------CC--CCCccEEEEEecCC
Q 019928 159 LKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLM------------EH--DKDVGAVVVGFDRY 224 (334)
Q Consensus 159 l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~------------~~--~~~~~~vv~~~~~~ 224 (334)
.+. +.+.+++.|....++.....|++-+...+++..+++.-.++.. ++ ...+++|++..|+.
T Consensus 116 ~~~----~~k~vLv~G~~~vr~vAegyGFk~Vvt~D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~~~~dPv 191 (389)
T KOG1618|consen 116 VEY----HYKRVLVVGQGSVREVAEGYGFKNVVTVDELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVLLLGDPV 191 (389)
T ss_pred hhh----hhceEEEecCCcHHHHhhccCccceeeHHHHHHhCCCcccccchhHhhhcccchhccccccceeEEEEecCch
Confidence 522 3478999999999999999999866666666666544332210 11 34689999998888
Q ss_pred CCHHHHHHHHHhHHcC-------------CCcEEEEecCCcccccccchhccccchHHHHhHh----hcC--CcccccCC
Q 019928 225 FNYYKVQYGTLCIREN-------------PGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVG----STQ--REPLVVGK 285 (334)
Q Consensus 225 ~~~~~l~~~~~~l~~~-------------~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~----~~~--~~~~~~gK 285 (334)
.+...++-...++..+ +.+.+.++|-|+.|..+......|.|.+.-+++. .+| .+...+||
T Consensus 192 ~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~GK 271 (389)
T KOG1618|consen 192 RWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTLGK 271 (389)
T ss_pred hhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHHHHHhcCCcccccccCC
Confidence 7777788777777652 1237889999999988888889999998766653 334 23357899
Q ss_pred CCHHHHHHHHHHh-------CC--CCCcEEEEccCchhHHHHHH---------------HcCCcEEEEccccC
Q 019928 286 PSTFMMDYLANKF-------GI--QKSQICMVGDRLDTDILFGQ---------------NGGCKTLLVLSGKW 334 (334)
Q Consensus 286 P~~~~~~~~~~~l-------gi--~~~evi~VGDs~~~DI~~a~---------------~aG~~tv~V~tG~~ 334 (334)
|++-.|+++...+ +. .++.+.||||++..||.+|+ .-|+-+|+|.||+|
T Consensus 272 Pt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~ 344 (389)
T KOG1618|consen 272 PTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVY 344 (389)
T ss_pred CceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeee
Confidence 9999998775443 22 57889999999999999997 77888999999987
No 13
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=99.82 E-value=1.1e-19 Score=141.89 Aligned_cols=101 Identities=52% Similarity=0.895 Sum_probs=89.9
Q ss_pred EEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHhCCCC
Q 019928 86 FIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFP 165 (334)
Q Consensus 86 viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~~~~~ 165 (334)
|+||+|||||++.+++|+|.++|+.|++.|+++.++||++++++.++.++|+.+|+++++++++++..++..|+.+..
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~~-- 78 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEHK-- 78 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHHT--
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhcC--
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999852
Q ss_pred CCcEEEEEeCcchHHHHHHcCCc
Q 019928 166 KDKKVYVVGEDGILKELELAGFQ 188 (334)
Q Consensus 166 ~~~~~~~~G~~~~~~~l~~~G~~ 188 (334)
.+++++++|.+++.+++++.|++
T Consensus 79 ~~~~v~vlG~~~l~~~l~~~G~e 101 (101)
T PF13344_consen 79 GGKKVYVLGSDGLREELREAGFE 101 (101)
T ss_dssp TSSEEEEES-HHHHHHHHHTTEE
T ss_pred CCCEEEEEcCHHHHHHHHHcCCC
Confidence 35889999999999999999874
No 14
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.78 E-value=2.4e-19 Score=159.70 Aligned_cols=54 Identities=20% Similarity=0.343 Sum_probs=49.0
Q ss_pred CcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 278 REPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 278 ~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
.+....+||+|++|+.++++||++|++|++|+|+. ++|++|++|||.+|+|..+
T Consensus 135 ~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~-~Gi~Aa~aAGm~vv~v~~~ 188 (221)
T COG0637 135 ADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAG 188 (221)
T ss_pred HHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecch-hHHHHHHHCCCEEEEecCC
Confidence 33444489999999999999999999999999999 9999999999999999863
No 15
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.74 E-value=2e-17 Score=150.28 Aligned_cols=56 Identities=25% Similarity=0.367 Sum_probs=50.4
Q ss_pred CCcccccCCCCHHHHHHHHHHhCCC-CCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 277 QREPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 277 ~~~~~~~gKP~~~~~~~~~~~lgi~-~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+.+....+||+|++|..+++++|+. |++|+||||++ +||++|+++|+.+|+|.+|-
T Consensus 148 ~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g~ 204 (253)
T TIGR01422 148 TTDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILSS 204 (253)
T ss_pred ccccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecCC
Confidence 3444455899999999999999995 99999999999 99999999999999999883
No 16
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.74 E-value=1.6e-18 Score=157.09 Aligned_cols=101 Identities=12% Similarity=-0.028 Sum_probs=71.5
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++.+.+.+..|++..-...|+||..... ........+.. ..+....+.+....+||+|++|+.+++++|++|++|+
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~-~~~~l~~~gl~---~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPREN-AELMISLLGLS---DFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHH-HHHHHHHcCCh---hhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 3345556666665444567777765432 11112222222 3333334444445589999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||||+. .|+++|+++|+.+|+|.+|
T Consensus 186 ~vgDs~-~Di~aA~~aGi~~i~v~~g 210 (248)
T PLN02770 186 VFEDSV-SGIKAGVAAGMPVVGLTTR 210 (248)
T ss_pred EEcCCH-HHHHHHHHCCCEEEEEeCC
Confidence 999999 9999999999999999887
No 17
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.74 E-value=1.7e-17 Score=151.94 Aligned_cols=55 Identities=24% Similarity=0.273 Sum_probs=49.5
Q ss_pred CcccccCCCCHHHHHHHHHHhCCC-CCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 278 REPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 278 ~~~~~~gKP~~~~~~~~~~~lgi~-~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.+....+||+|++|..+++++|+. +++|+||||+. +||++|+++|+.+|+|.+|-
T Consensus 151 ~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 151 TDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred CCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccCc
Confidence 344445899999999999999996 69999999999 99999999999999999873
No 18
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.73 E-value=7.2e-18 Score=151.03 Aligned_cols=56 Identities=25% Similarity=0.372 Sum_probs=50.6
Q ss_pred CCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 277 QREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 277 ~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+.+....+||+|++|.++++++|++|++|+||||+. +||++|+++|+.+|+|.+|-
T Consensus 143 ~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g~ 198 (229)
T PRK13226 143 GGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDE-RDILAARAAGMPSVAALWGY 198 (229)
T ss_pred ecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCH-HHHHHHHHCCCcEEEEeecC
Confidence 334444589999999999999999999999999999 99999999999999998873
No 19
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.73 E-value=1.6e-17 Score=147.53 Aligned_cols=103 Identities=30% Similarity=0.293 Sum_probs=73.8
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++.+.+.+..+++.+....++||..... ........+. ...+......+....+||+|++|..+++++|+++++|+
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~l~~~~l---~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVK-QWEKLERLGV---RDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHhCCh---HHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 4456677777776544567788876422 1111122222 23333334444555689999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+|||++.+||++|+++|+++|+|.+|.
T Consensus 172 ~igDs~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred EECCChHHHHHHHHHCCCEEEEECCCC
Confidence 999998689999999999999998874
No 20
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.72 E-value=1.7e-17 Score=153.35 Aligned_cols=53 Identities=17% Similarity=0.325 Sum_probs=49.3
Q ss_pred cccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 279 EPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 279 ~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
+....+||+|++|..+++++|++|++|+||||+. +||++|+++|+.+|+|.+|
T Consensus 196 ~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 196 DDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred cccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCH-HhHHHHHHcCCEEEEEccC
Confidence 3344589999999999999999999999999999 9999999999999999887
No 21
>PRK11587 putative phosphatase; Provisional
Probab=99.72 E-value=3e-17 Score=145.88 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=48.1
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 281 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 281 ~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
....||+|++|..+++++|++|++|+||||+. .|+++|+++|+++|+|.+|
T Consensus 134 ~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~-~di~aA~~aG~~~i~v~~~ 184 (218)
T PRK11587 134 VKRGKPEPDAYLLGAQLLGLAPQECVVVEDAP-AGVLSGLAAGCHVIAVNAP 184 (218)
T ss_pred hcCCCCCcHHHHHHHHHcCCCcccEEEEecch-hhhHHHHHCCCEEEEECCC
Confidence 34589999999999999999999999999999 9999999999999999876
No 22
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.71 E-value=1e-17 Score=152.73 Aligned_cols=99 Identities=20% Similarity=0.205 Sum_probs=69.8
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++...+.+..|+.......|+||..... ........+. ...+....+.+....+||+|++|..+++++|++|++|+
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~-~~~~l~~~gl---~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRY-LERAIEAVGM---EGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHH-HHHHHHHcCC---HhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 3345666666665444566777765421 1111122232 23344444445555699999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
||||+. .|+++|+++|+.+|+|.
T Consensus 187 ~IgDs~-~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSN-SSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEEe
Confidence 999999 99999999999999996
No 23
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.71 E-value=4.7e-18 Score=151.35 Aligned_cols=102 Identities=24% Similarity=0.218 Sum_probs=74.4
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
|+.+.+++..+++.+....|+||..... ........+...++..+. +.+.....||+|..+..+++.+|++|++++
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~-~~~~l~~~gl~~~F~~i~---g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERE-LDILLKALGLADYFDVIV---GGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHH-HHHHHHHhCCccccceEE---cCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 4456666777776544667777765532 122222234443343333 344455599999999999999999988999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
||||+. +||+||++||+.+|+|+||.
T Consensus 167 ~VGDs~-~Di~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 167 MVGDSL-NDILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred EECCCH-HHHHHHHHcCCCEEEEECCC
Confidence 999999 99999999999999999984
No 24
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.71 E-value=2.4e-18 Score=148.49 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=46.9
Q ss_pred cccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 279 EPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 279 ~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
+.....||+|++|..++++++++|++|+||||+. +|+++|+++|+++|+|.
T Consensus 135 ~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~-~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 135 AEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQ-AGIEAIKAAGMFAVGVG 185 (185)
T ss_pred hhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCH-HHHHHHHHcCCEEEecC
Confidence 3344589999999999999999999999999999 99999999999999984
No 25
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.71 E-value=2.9e-16 Score=128.38 Aligned_cols=46 Identities=30% Similarity=0.395 Sum_probs=43.8
Q ss_pred CCCCHHHHHHHHHHh-CCCCCcEEEEcc-CchhHHHHHHHcCCcEEEEc
Q 019928 284 GKPSTFMMDYLANKF-GIQKSQICMVGD-RLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 284 gKP~~~~~~~~~~~l-gi~~~evi~VGD-s~~~DI~~a~~aG~~tv~V~ 330 (334)
.||+|++|+.+++++ +++|++++|||| +. +|+++|+++|+.+|+|.
T Consensus 84 ~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~-~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 RKPKPGMFLEALKRFNEIDPEESVYVGDQDL-TDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCChHHHHHHHHHcCCCChhheEEEcCCCc-ccHHHHHHCCCeEEEee
Confidence 899999999999999 599999999999 67 99999999999999985
No 26
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.70 E-value=1.6e-17 Score=147.09 Aligned_cols=99 Identities=23% Similarity=0.134 Sum_probs=68.3
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
...+.+..+++..-...|+||..... ........+. ...+....+.+....+||+|++|.++++++|++|+++++|
T Consensus 86 g~~~~l~~L~~~g~~~~i~S~~~~~~-~~~~l~~~gl---~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 86 TVYETLKTLKKQGYKLGIVTTKMRDT-VEMGLKLTGL---DEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHcCC---hhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 34555555554333345666654321 1111112222 2233334444555569999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEEccc
Q 019928 309 GDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||+. +|+++|+++|+.+|+|.+|
T Consensus 162 GDs~-~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 162 GDNH-HDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred CCCH-HHHHHHHHCCCeEEEEcCC
Confidence 9999 9999999999999999987
No 27
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.70 E-value=1.3e-17 Score=144.39 Aligned_cols=93 Identities=14% Similarity=0.055 Sum_probs=65.2
Q ss_pred HHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccC
Q 019928 232 YGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDR 311 (334)
Q Consensus 232 ~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs 311 (334)
+.+..+++. ....|+||..... ........+. ...+....+.+.....||+|++|+.+++++|++|++|++|||+
T Consensus 94 e~L~~L~~~-~~l~I~T~~~~~~-~~~~l~~~~l---~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs 168 (188)
T PRK10725 94 EVVKAWHGR-RPMAVGTGSESAI-AEALLAHLGL---RRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDA 168 (188)
T ss_pred HHHHHHHhC-CCEEEEcCCchHH-HHHHHHhCCc---HhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEecc
Confidence 344445443 4567777754321 1111122222 2333444444555569999999999999999999999999999
Q ss_pred chhHHHHHHHcCCcEEEEc
Q 019928 312 LDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 312 ~~~DI~~a~~aG~~tv~V~ 330 (334)
. +|+++|+++|+++|+|.
T Consensus 169 ~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 169 D-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred H-hhHHHHHHCCCEEEeec
Confidence 9 99999999999999985
No 28
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.69 E-value=9.6e-18 Score=158.86 Aligned_cols=100 Identities=19% Similarity=0.126 Sum_probs=70.1
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+...+.+..|++..-...|+||..... ........+.. .+|....+.+....+||+|++|..+++++|+.|++|+|
T Consensus 219 pGa~ElL~~Lk~~GiklaIaSn~~~~~-~~~~L~~lgL~---~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 219 TGSQEFVNVLMNYKIPMALVSTRPRKT-LENAIGSIGIR---GFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV 294 (381)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHcCCH---HHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 345555666655444456667655421 11111122222 33444444555556999999999999999999999999
Q ss_pred EccCchhHHHHHHHcCCcEEEEccc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
|||+. .||++|+++|+++|+|.+|
T Consensus 295 IGDS~-~DIeAAk~AGm~~IgV~~~ 318 (381)
T PLN02575 295 FGNSN-QTVEAAHDARMKCVAVASK 318 (381)
T ss_pred EcCCH-HHHHHHHHcCCEEEEECCC
Confidence 99999 9999999999999999875
No 29
>PLN02940 riboflavin kinase
Probab=99.69 E-value=8.6e-18 Score=161.25 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=67.1
Q ss_pred HHHHHHhHHcCCCcEEEEecCCcccccccchh-ccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 230 VQYGTLCIRENPGCLFIATNRDAVTHLTDAQE-WAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 230 l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~-~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
..+.+..+++..-...|+||...... ..... ..+ +.+.+....+.+....+||+|++|..+++++|++|++|++|
T Consensus 98 v~elL~~Lk~~g~~l~IvTn~~~~~~-~~~l~~~~g---l~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~V 173 (382)
T PLN02940 98 ANRLIKHLKSHGVPMALASNSPRANI-EAKISCHQG---WKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVI 173 (382)
T ss_pred HHHHHHHHHHCCCcEEEEeCCcHHHH-HHHHHhccC---hHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 44445555544334556666543211 11111 112 22333334444455569999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEEccc
Q 019928 309 GDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||+. .||++|+++|+++|+|.+|
T Consensus 174 GDs~-~Di~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 174 EDSL-PGVMAGKAAGMEVIAVPSI 196 (382)
T ss_pred eCCH-HHHHHHHHcCCEEEEECCC
Confidence 9999 9999999999999999886
No 30
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.69 E-value=4.9e-16 Score=133.57 Aligned_cols=50 Identities=36% Similarity=0.462 Sum_probs=47.6
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcE-EEEcccc
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT-LLVLSGK 333 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~t-v~V~tG~ 333 (334)
.+||+|++|..+++++|+++++|+||||+. +||++|+++|+.+ ++|.+|.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~ 154 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGK 154 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCC
Confidence 389999999999999999999999999999 9999999999998 8999884
No 31
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.69 E-value=3.6e-17 Score=145.47 Aligned_cols=51 Identities=16% Similarity=0.179 Sum_probs=47.6
Q ss_pred cccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 281 LVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 281 ~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
....||+|++|+.+++++|++|++|++|||+. .||++|+++|+++|++.++
T Consensus 138 ~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~-~di~aA~~aG~~~i~~~~~ 188 (221)
T PRK10563 138 IQRWKPDPALMFHAAEAMNVNVENCILVDDSS-AGAQSGIAAGMEVFYFCAD 188 (221)
T ss_pred cCCCCCChHHHHHHHHHcCCCHHHeEEEeCcH-hhHHHHHHCCCEEEEECCC
Confidence 33589999999999999999999999999999 9999999999999999764
No 32
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.69 E-value=9.7e-17 Score=142.51 Aligned_cols=54 Identities=24% Similarity=0.405 Sum_probs=48.8
Q ss_pred cccccCCCCHHHHHHHHHHhCCC-CCcEEEEccCchhHHHHHHHcCCcE-EEEcccc
Q 019928 279 EPLVVGKPSTFMMDYLANKFGIQ-KSQICMVGDRLDTDILFGQNGGCKT-LLVLSGK 333 (334)
Q Consensus 279 ~~~~~gKP~~~~~~~~~~~lgi~-~~evi~VGDs~~~DI~~a~~aG~~t-v~V~tG~ 333 (334)
+....+||+|++|..+++++|++ |++|+||||+. +||++|+++|+.+ |+|.+|.
T Consensus 139 ~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~ 194 (220)
T TIGR03351 139 SDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGA 194 (220)
T ss_pred CcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCC
Confidence 33345899999999999999997 79999999999 9999999999999 9998873
No 33
>PRK06769 hypothetical protein; Validated
Probab=99.68 E-value=1.9e-16 Score=135.72 Aligned_cols=49 Identities=39% Similarity=0.514 Sum_probs=47.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.||+|++|..+++++|++|++|+||||+. +|+++|+++|+++|+|.+|.
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~ 140 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGA 140 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence 89999999999999999999999999999 99999999999999999873
No 34
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.68 E-value=1.9e-16 Score=142.65 Aligned_cols=96 Identities=23% Similarity=0.162 Sum_probs=72.3
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++...+.+..|++. ....++||..... ...+.. ..+....+.+.....||+|++|+.+++++|++|++|+
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~~------~~~gl~---~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~ 184 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQP------ELFGLG---DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEIL 184 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCchH------HHCCcH---HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEE
Confidence 44567777788764 6678888865421 122333 3334444445555689999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||||++..||++|+++|+++|+|..+
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 99999549999999999999999753
No 35
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.68 E-value=4.1e-17 Score=140.72 Aligned_cols=96 Identities=11% Similarity=0.103 Sum_probs=64.6
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++.+.+.+..+++..-...++||... ........+. ...+....+.+.....||+|++|..+++++|++|++++
T Consensus 90 ~~g~~~~l~~l~~~g~~i~i~S~~~~---~~~~l~~~~l---~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 90 LPGIENFLKRLKKKGIAVGLGSSSKN---ADRILAKLGL---TDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCchh---HHHHHHHcCh---HHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 33455556666554333456665411 1111111222 23333344444455699999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEE
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
+|||+. .|+++|+++|+++|+|
T Consensus 164 ~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 164 VFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred EEeCcH-hhHHHHHHCCCeEeeC
Confidence 999999 9999999999999976
No 36
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.68 E-value=3.9e-16 Score=130.24 Aligned_cols=48 Identities=29% Similarity=0.512 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
.||+|++|+.+++++|+++++|++|||+. .|+++|+++|+++|+|--|
T Consensus 100 ~KP~~~~~~~~~~~~~~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 RKPKPGLILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCCH-HHHHHHHHCCCCEEEecCC
Confidence 79999999999999999999999999998 9999999999999998644
No 37
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.68 E-value=1.1e-17 Score=147.69 Aligned_cols=100 Identities=23% Similarity=0.243 Sum_probs=67.8
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
...+.+..++.......|+||..... ........+. ...+....+.+....+||+|++|..+++++|++|++|++|
T Consensus 89 g~~~~L~~l~~~g~~~~i~S~~~~~~-~~~~l~~~~l---~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 89 GVEATLGALRAKGLRLGLVTNKPTPL-ARPLLELLGL---AKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHcCc---HhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 34455555554333455666654321 1111111121 2223333444555568999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEEcccc
Q 019928 309 GDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
||+. +|+++|+++|+.+|+|.+|-
T Consensus 165 gDs~-~d~~aa~~aG~~~i~v~~g~ 188 (213)
T TIGR01449 165 GDSR-VDIQAARAAGCPSVLLTYGY 188 (213)
T ss_pred CCCH-HHHHHHHHCCCeEEEEccCC
Confidence 9999 99999999999999998873
No 38
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.67 E-value=4.7e-17 Score=142.76 Aligned_cols=97 Identities=22% Similarity=0.143 Sum_probs=69.1
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++...+.+..+++......|+||.+.. ........+.. ..+......+....+||+|++|.++++++|++|++|+
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~--~~~~l~~~~l~---~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR--LRGLLEALGLL---EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh--HHHHHHHCCcH---HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 445666777777654457888887642 11112222222 2333333444455689999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEE
Q 019928 307 MVGDRLDTDILFGQNGGCKTLL 328 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~ 328 (334)
+|||++.+||++|+++|+++|+
T Consensus 182 ~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EECCCchHHHHHHHHcCCeeeC
Confidence 9999976899999999999985
No 39
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.67 E-value=3.9e-16 Score=132.06 Aligned_cols=49 Identities=24% Similarity=0.330 Sum_probs=47.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.||+|++|+.+++++++++++|+||||+. +|+++|+++|+++++|.+|+
T Consensus 102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 102 RKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhh
Confidence 89999999999999999999999999999 99999999999999999885
No 40
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.67 E-value=3.8e-17 Score=145.48 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=71.1
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
|+.+.+.+..+++......|+||..... ........+. ...+....+.+....+||+|++|..+++++|++|++|+
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~-~~~~l~~~~l---~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHM-LEAVLTMFDL---RDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHH-HHHHHHhCcc---hhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 4456666777766544567777755421 1111111222 22233333444455699999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
+|||+. +|+++|+++|+++|+|..+
T Consensus 170 ~igDs~-~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSF-NGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCCh-hhHHHHHHcCCEEEEecCC
Confidence 999999 9999999999999999865
No 41
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.66 E-value=1.1e-16 Score=140.00 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=69.8
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+...+++..+++..-...++||..... ........+.. ..+......+.....||+|++|..+++++|++|++|++
T Consensus 95 ~~~~~~L~~L~~~g~~~~i~Sn~~~~~-~~~~l~~~gl~---~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 95 PDVPAGLRALKERGYRLAILSNGSPAM-LKSLVKHAGLD---DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHCCCh---hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 345566666765434467778766432 11111222322 23333333444556899999999999999999999999
Q ss_pred EccCchhHHHHHHHcCCcEEEEcc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
|||+. +|+++|+++|+++|+|.-
T Consensus 171 vgD~~-~Di~~A~~~G~~~i~v~r 193 (198)
T TIGR01428 171 VASNP-WDLGGAKKFGFKTAWVNR 193 (198)
T ss_pred EeCCH-HHHHHHHHCCCcEEEecC
Confidence 99999 999999999999999974
No 42
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.65 E-value=3.9e-16 Score=137.49 Aligned_cols=185 Identities=17% Similarity=0.182 Sum_probs=118.8
Q ss_pred hcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCC--CeEEEEeCCCCCCHHHHHHHH-HHcCCCCCcCcEEecHHHHHH
Q 019928 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKG--KRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASSFAAAA 157 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G--~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~~~~~i~~~~~~~~~ 157 (334)
..+.+++||+||||+|++.++..+.+-+ +...| +++.+-....|+...+.++.+ ..+..+++.++++........
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~--~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~ 85 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQEL--LDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILD 85 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHHH--HHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 4577999999999999998876654332 33344 333333334577777777766 678888887766554432222
Q ss_pred HHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHH-HHHHHHHh
Q 019928 158 YLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYY-KVQYGTLC 236 (334)
Q Consensus 158 ~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~l~~~~~~ 236 (334)
.+- .......|.+.+.++|...|+++ +++.+..+. +++ ++... ..
T Consensus 86 ~~~------~~~~~~PGa~kLv~~L~~~gip~--------------------------alat~s~~~-~~~~k~~~~-~~ 131 (222)
T KOG2914|consen 86 RLF------MNSILMPGAEKLVNHLKNNGIPV--------------------------ALATSSTSA-SFELKISRH-ED 131 (222)
T ss_pred Hhc------cccccCCcHHHHHHHHHhCCCCe--------------------------eEEecCCcc-cHHHHHHHh-hH
Confidence 111 12345568888999999988876 333333222 121 11111 00
Q ss_pred HHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCC-CcEEEEccCchhH
Q 019928 237 IRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK-SQICMVGDRLDTD 315 (334)
Q Consensus 237 l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~-~evi~VGDs~~~D 315 (334)
+.. .++.+.. .+......|||+|++|..+++++|..| +.|++|+|++ .+
T Consensus 132 ~~~----------------------------~f~~~v~-~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~-~G 181 (222)
T KOG2914|consen 132 IFK----------------------------NFSHVVL-GDDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSP-VG 181 (222)
T ss_pred HHH----------------------------hcCCCee-cCCccccCCCCCchHHHHHHHhcCCCCccceEEECCCH-HH
Confidence 100 0011111 111223349999999999999999998 9999999999 99
Q ss_pred HHHHHHcCCcEEEEcc
Q 019928 316 ILFGQNGGCKTLLVLS 331 (334)
Q Consensus 316 I~~a~~aG~~tv~V~t 331 (334)
+++|++|||++|+|.+
T Consensus 182 v~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 182 VQAAKAAGMQVVGVAT 197 (222)
T ss_pred HHHHHhcCCeEEEecC
Confidence 9999999999999976
No 43
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.65 E-value=2.2e-15 Score=130.09 Aligned_cols=49 Identities=33% Similarity=0.457 Sum_probs=47.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+||+|++|..+++++|+++++|+||||+. +|+++|+++|+.+|+|.+|.
T Consensus 102 ~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~ 150 (181)
T PRK08942 102 RKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGK 150 (181)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCC
Confidence 89999999999999999999999999999 99999999999999998873
No 44
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.65 E-value=8.7e-17 Score=141.40 Aligned_cols=101 Identities=20% Similarity=0.134 Sum_probs=69.6
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+...+.+..+++.+....++||..... ........+.. ..+....+.+....+||+|++|..+++++|+++++|+|
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn~~~~~-~~~~l~~~~l~---~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATGKSGPR-ARSLLEALGLL---PLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHHHcCCh---hheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 344555666655444566777754322 11111122222 22233333444456899999999999999999999999
Q ss_pred EccCchhHHHHHHHcCCcEEEEcccc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
|||+. +|+++|+++|+.+|+|.+|.
T Consensus 154 igD~~-~Di~aA~~~Gi~~i~~~~g~ 178 (205)
T TIGR01454 154 VGDAV-TDLASARAAGTATVAALWGE 178 (205)
T ss_pred EcCCH-HHHHHHHHcCCeEEEEEecC
Confidence 99999 99999999999999999883
No 45
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.64 E-value=8.2e-16 Score=137.28 Aligned_cols=101 Identities=12% Similarity=0.012 Sum_probs=70.6
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++...+.+..|++......++||..... ........+ +...+....+.+....+||+|++|+.+++++|++|++|+
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~-~~~~l~~~~---l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHN-LAVKLEHTG---LDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHH-HHHHHHHCC---cHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 3445666777776544567778754322 111111222 233444444445555699999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcE-EEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKT-LLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~t-v~V~tG 332 (334)
+|||+. .|+++|+++|+++ ++|.+|
T Consensus 171 ~igDs~-~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 171 FIDDSE-PILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred EEcCCH-HHHHHHHHcCCeEEEEEeCC
Confidence 999999 9999999999985 678765
No 46
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.63 E-value=4.1e-15 Score=131.25 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=72.4
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++.+.+.+..|++.+....++||........ . .......+...+......+.....||+|++|+.+++++|++|++|+
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~-~-~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l 173 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHSA-E-EALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV 173 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccchh-h-hHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 5567777778876544567788864422101 0 0111111223343333444455689999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||||+. .||++|+++|+++|+|.++
T Consensus 174 ~i~D~~-~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 174 FLDDLG-SNLKPAAALGITTIKVSDE 198 (211)
T ss_pred EEcCCH-HHHHHHHHcCCEEEEECCH
Confidence 999999 9999999999999999764
No 47
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.63 E-value=3.8e-16 Score=143.46 Aligned_cols=100 Identities=18% Similarity=0.183 Sum_probs=67.5
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+...+.+..+++.+...+++||..... ........+.. ..+....+.+....+||+|++|+.+++++|+++++|++
T Consensus 104 ~g~~e~L~~Lk~~g~~l~ivTn~~~~~-~~~~l~~~~i~---~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 104 PGVRDTLKWLKKQGVEMALITNKPERF-VAPLLDQMKIG---RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CCHHHHHHHHHHCCCeEEEEECCcHHH-HHHHHHHcCcH---hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 345555656654433456666654321 11111111222 22222333444455899999999999999999999999
Q ss_pred EccCchhHHHHHHHcCCcEEEEccc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
|||+. +||++|+++|+.+++|.+|
T Consensus 180 IGD~~-~Di~aA~~aGi~~i~v~~G 203 (272)
T PRK13223 180 VGDSR-SDVLAAKAAGVQCVALSYG 203 (272)
T ss_pred ECCCH-HHHHHHHHCCCeEEEEecC
Confidence 99999 9999999999999999887
No 48
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.62 E-value=1.9e-15 Score=134.24 Aligned_cols=101 Identities=22% Similarity=0.181 Sum_probs=72.6
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHh-CCCCCcE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF-GIQKSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~l-gi~~~ev 305 (334)
++...+.+..++.. ....++||..... ........+...++ ......+.....||+|++|..+++++ |++|++|
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~-~~~~l~~~~l~~~f---d~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 173 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRET-QYKRLRKSGLFPFF---DDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEV 173 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHH-HHHHHHHCCcHhhc---CEEEEcCccCCCCCCHHHHHHHHHHhcCCCchhe
Confidence 33456667777766 6678888865421 11112223333333 33334444556899999999999999 9999999
Q ss_pred EEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 306 CMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
++|||+..+|+++|+++|+++|++.+|
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCC
Confidence 999999846999999999999999876
No 49
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.62 E-value=3.6e-16 Score=166.65 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=66.9
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
.+.+.+..|++..-...|+||...... .......+.. ...+......+....+||+|++|+.+++++|++|++|++|
T Consensus 165 G~~elL~~Lk~~G~~l~IvSn~~~~~~-~~~L~~~gl~--~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 165 GALELITQCKNKGLKVAVASSADRIKV-DANLAAAGLP--LSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cHHHHHHHHHhCCCeEEEEeCCcHHHH-HHHHHHcCCC--hhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 344445555543334556666544221 1111111211 1223333334445568999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEEccc
Q 019928 309 GDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||+. .|+++|+++||++|+|.+|
T Consensus 242 gDs~-~Di~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 242 EDAL-AGVQAARAAGMRCIAVTTT 264 (1057)
T ss_pred cCCH-HHHHHHHHcCCEEEEECCC
Confidence 9999 9999999999999999987
No 50
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.62 E-value=2e-15 Score=132.28 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=71.5
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccc-hhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDA-QEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~-~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev 305 (334)
++.+.+.+..+++.+....|+||...... ... ....+ +...+......+....+||+|++|+.+++++|++|++|
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~-~~~~~~~~~---l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHT-TFWPEEYPE---VRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhH-HHHHhhchh---HHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 44566677777665445677788654210 000 00111 22333333344455569999999999999999999999
Q ss_pred EEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 306 CMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
++|||+. .|+++|+++|+++|++..+
T Consensus 162 l~vgD~~-~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 162 VFFDDNA-DNIEAANALGITSILVTDK 187 (199)
T ss_pred EEeCCCH-HHHHHHHHcCCEEEEecCC
Confidence 9999999 9999999999999999765
No 51
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.62 E-value=6.6e-15 Score=125.29 Aligned_cols=45 Identities=36% Similarity=0.524 Sum_probs=42.0
Q ss_pred CCCCHHHHHHHHHHhC--CCCCcEEEEccCc-------hhHHHHHHHcCCcEEE
Q 019928 284 GKPSTFMMDYLANKFG--IQKSQICMVGDRL-------DTDILFGQNGGCKTLL 328 (334)
Q Consensus 284 gKP~~~~~~~~~~~lg--i~~~evi~VGDs~-------~~DI~~a~~aG~~tv~ 328 (334)
.||+|++|.++++++| +++++++||||+. .+|+++|+++|+.+++
T Consensus 107 ~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 8999999999999999 9999999999995 3799999999999875
No 52
>PRK09449 dUMP phosphatase; Provisional
Probab=99.61 E-value=2e-15 Score=134.42 Aligned_cols=101 Identities=27% Similarity=0.213 Sum_probs=70.4
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCC-CCcE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQ-KSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~-~~ev 305 (334)
++...+.+..|++ .....++||..... ........+.. ..+......+.....||+|++|..+++++|+. +++|
T Consensus 97 ~~g~~~~L~~L~~-~~~~~i~Tn~~~~~-~~~~l~~~~l~---~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 171 (224)
T PRK09449 97 LPGAVELLNALRG-KVKMGIITNGFTEL-QQVRLERTGLR---DYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRV 171 (224)
T ss_pred CccHHHHHHHHHh-CCeEEEEeCCcHHH-HHHHHHhCChH---HHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccE
Confidence 4456677777773 35667888865421 11112222222 33333444455556899999999999999985 4899
Q ss_pred EEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 306 CMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
++|||+..+||++|+++|+++|+|.++
T Consensus 172 ~~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 172 LMVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred EEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 999999846999999999999999743
No 53
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.61 E-value=5.6e-15 Score=126.29 Aligned_cols=50 Identities=32% Similarity=0.440 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.||+|++|..+++++|+++++|+||||+..+|+++|+++|+.+|+|.+|.
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~ 139 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLV 139 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCc
Confidence 79999999999999999999999999998579999999999999999885
No 54
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.61 E-value=7.8e-16 Score=136.94 Aligned_cols=55 Identities=25% Similarity=0.414 Sum_probs=50.2
Q ss_pred CCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 277 QREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 277 ~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
+.+.....||+|++|+.+++++++++++|++|||+. +|+++|+++|+.+|+|.+|
T Consensus 141 ~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 141 GGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred cCCCCCCCCcChHHHHHHHHHcCCChhheEEECCCH-HHHHHHHHCCCcEEEECcC
Confidence 334444589999999999999999999999999999 9999999999999999887
No 55
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.61 E-value=2.6e-15 Score=132.84 Aligned_cols=99 Identities=20% Similarity=0.155 Sum_probs=77.7
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
..++.+..+++..-...+.||.|...+ ..+...+...+++.+..+..... -||+|.+|+++++++|+.|+||++|
T Consensus 117 ~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~fD~vv~S~e~g~---~KPDp~If~~al~~l~v~Pee~vhI 191 (237)
T KOG3085|consen 117 GMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAYFDFVVESCEVGL---EKPDPRIFQLALERLGVKPEECVHI 191 (237)
T ss_pred HHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHhhhhhhhhhhhcc---CCCChHHHHHHHHHhCCChHHeEEe
Confidence 345677777764436777788887543 33334454566666666655555 9999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEEccc
Q 019928 309 GDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
||++.||+++|+++||++++|-+.
T Consensus 192 gD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 192 GDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred cCccccccHhHHHcCCEEEEEccc
Confidence 999999999999999999999754
No 56
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.61 E-value=1.5e-15 Score=131.21 Aligned_cols=95 Identities=22% Similarity=0.170 Sum_probs=66.4
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCccccc----CCCCHHHHHHHHHHhCCCC
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV----GKPSTFMMDYLANKFGIQK 302 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~----gKP~~~~~~~~~~~lgi~~ 302 (334)
++.+.+.+..|+ +..+++||..... ........+.. ..+......+.... .||+|++|+.+++++|++|
T Consensus 86 ~~g~~~~L~~L~---~~~~i~Tn~~~~~-~~~~l~~~gl~---~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~ 158 (184)
T TIGR01993 86 DPELRNLLLRLP---GRKIIFTNGDRAH-ARRALNRLGIE---DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDP 158 (184)
T ss_pred CHHHHHHHHhCC---CCEEEEeCCCHHH-HHHHHHHcCcH---hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCc
Confidence 445566666654 4577888876532 12222222322 23333333333333 5999999999999999999
Q ss_pred CcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 303 SQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 303 ~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
++|++|||+. .||++|+++|+++|+|
T Consensus 159 ~~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 159 ERAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred cceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 9999999999 9999999999999986
No 57
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.60 E-value=1.3e-14 Score=123.53 Aligned_cols=139 Identities=29% Similarity=0.384 Sum_probs=103.9
Q ss_pred CcEEEEecceeEEeCCe----------ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH
Q 019928 83 VETFIFDCDGVIWKGDK----------LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS 152 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~----------~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~ 152 (334)
.+++++|-||||..... +++++.+++.+|++.|++++++||++|..+..+.+.
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~----------------- 67 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEA----------------- 67 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHH-----------------
Confidence 67999999999987443 478899999999999999999999988765433211
Q ss_pred HHHHHHHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHH
Q 019928 153 FAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQY 232 (334)
Q Consensus 153 ~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~ 232 (334)
++... ...+...|++.|+++. .+
T Consensus 68 ----~f~~~-------------~~~m~~~l~~~gv~id-------------------------~i--------------- 90 (181)
T COG0241 68 ----DFDKL-------------HNKMLKILASQGVKID-------------------------GI--------------- 90 (181)
T ss_pred ----HHHHH-------------HHHHHHHHHHcCCccc-------------------------eE---------------
Confidence 11111 1225566777776541 11
Q ss_pred HHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCc
Q 019928 233 GTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRL 312 (334)
Q Consensus 233 ~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~ 312 (334)
++|.+... +...+.||++-+++.+++++++++++.++|||++
T Consensus 91 ------------~~Cph~p~--------------------------~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~ 132 (181)
T COG0241 91 ------------LYCPHHPE--------------------------DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL 132 (181)
T ss_pred ------------EECCCCCC--------------------------CCCcccCCChHHHHHHHHHhCCCccceEEecCcH
Confidence 12221110 1133499999999999999999999999999999
Q ss_pred hhHHHHHHHcCCcEEEEccccC
Q 019928 313 DTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 313 ~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
+|+++|.++|++.+.+.+|++
T Consensus 133 -~Dlq~a~n~gi~~~~~~~~~~ 153 (181)
T COG0241 133 -TDLQAAENAGIKGVLVLTGIG 153 (181)
T ss_pred -HHHHHHHHCCCCceEEEcCcc
Confidence 999999999999999999864
No 58
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.59 E-value=5.3e-15 Score=131.76 Aligned_cols=102 Identities=25% Similarity=0.235 Sum_probs=73.1
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++...+.+..+... -...+.||..... ........|...+++.+ .-.+.....||+|++|.++++++|++|++++
T Consensus 101 ~~~~~~~L~~l~~~-~~l~ilTNg~~~~-~~~~l~~~gl~~~Fd~v---~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 101 YPEALEALKELGKK-YKLGILTNGARPH-QERKLRQLGLLDYFDAV---FISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred ChhHHHHHHHHHhh-ccEEEEeCCChHH-HHHHHHHcCChhhhheE---EEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 44555666666543 4478889964322 12222333333444444 4444445699999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+|||++.|||.+|+++||++|+|..+.
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCC
Confidence 999999999999999999999997653
No 59
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.59 E-value=6.1e-14 Score=128.41 Aligned_cols=58 Identities=21% Similarity=0.352 Sum_probs=51.6
Q ss_pred cCcEEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
++|+|+|||||||++.++ +.+.+.++|++++++|+.++++| ||+...+...++.+|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVT---GRHHVAIHPFYQALALD 60 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCC
Confidence 479999999999998765 56668999999999999999999 89999888888999886
No 60
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.59 E-value=8.9e-15 Score=120.73 Aligned_cols=47 Identities=32% Similarity=0.465 Sum_probs=46.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
+||.+..|..+++.+++++++|+||||++.+||.+|+.+||+||+|.
T Consensus 92 ~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 92 KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 89999999999999999999999999999999999999999999984
No 61
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.58 E-value=1e-14 Score=127.41 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=65.6
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHH-HHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMV-GAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev 305 (334)
|+...+.+..|++. +..+++||...... .......+...++ ..+....+.+. .||+|++|..+++++| ++++
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~-~~~~~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~--~~~~ 148 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGDSID-ALLNRQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG--DRVV 148 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCccchh-HHHHhhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC--CCcE
Confidence 44566677777664 55667777543221 1011111111111 11222223333 5888999999999999 8999
Q ss_pred EEEccCchhHHHHHHHc--CCcEEEEcccc
Q 019928 306 CMVGDRLDTDILFGQNG--GCKTLLVLSGK 333 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~a--G~~tv~V~tG~ 333 (334)
++|||+. +|+++|+++ |+++|+|.+|.
T Consensus 149 v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 149 CFVDDLA-HNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred EEeCCCH-HHHHHHHHHHcCCcEEEecchh
Confidence 9999999 999999999 99999999884
No 62
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.54 E-value=2.5e-15 Score=147.86 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=61.8
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
+...+.+..+++.+....|+||...... .......+.. ..+....+.+.. .+||+|++|..++++++ |++|++
T Consensus 333 pG~~e~L~~Lk~~g~~l~IvS~~~~~~~-~~~l~~~~l~---~~f~~i~~~d~v-~~~~kP~~~~~al~~l~--~~~~v~ 405 (459)
T PRK06698 333 PNVKEIFTYIKENNCSIYIASNGLTEYL-RAIVSYYDLD---QWVTETFSIEQI-NSLNKSDLVKSILNKYD--IKEAAV 405 (459)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchHHH-HHHHHHCCcH---hhcceeEecCCC-CCCCCcHHHHHHHHhcC--cceEEE
Confidence 3445555556554344566666554221 1111112222 222222223322 25788899999999875 689999
Q ss_pred EccCchhHHHHHHHcCCcEEEEccc
Q 019928 308 VGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 308 VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
|||++ +|+++|+++|+.+|+|.+|
T Consensus 406 VGDs~-~Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 406 VGDRL-SDINAAKDNGLIAIGCNFD 429 (459)
T ss_pred EeCCH-HHHHHHHHCCCeEEEEeCC
Confidence 99999 9999999999999999886
No 63
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.54 E-value=1.2e-14 Score=133.29 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=44.9
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 285 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 285 KP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+|+++.|..++++++++|++|++|||+. +|+++|+++|+++|+|.+|.
T Consensus 195 ~~k~~~~~~~l~~~~~~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~~g~ 242 (273)
T PRK13225 195 LSKRRALSQLVAREGWQPAAVMYVGDET-RDVEAARQVGLIAVAVTWGF 242 (273)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEECCCH-HHHHHHHHCCCeEEEEecCC
Confidence 4567999999999999999999999999 99999999999999999873
No 64
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.53 E-value=2.6e-14 Score=122.71 Aligned_cols=95 Identities=20% Similarity=0.126 Sum_probs=65.3
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
...+.+..+++......++||..... .......+... .+......+....+||+|++|..+++++|++|++|++|
T Consensus 89 g~~~~l~~l~~~g~~~~i~Tn~~~~~--~~~~~~~~l~~---~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 89 GVEPLLEALRARGKKLALLTNSPRDH--AVLVQELGLRD---LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchHH--HHHHHhcCCHH---HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 44555666655433456777766532 11111122222 23332233344569999999999999999999999999
Q ss_pred ccCchhHHHHHHHcCCcEEEE
Q 019928 309 GDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~tv~V 329 (334)
||+. .|+++|+++|+.+|+|
T Consensus 164 gD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 164 DDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred cCCH-HHHHHHHHcCCEEEeC
Confidence 9999 9999999999999986
No 65
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.52 E-value=2.2e-13 Score=121.65 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=51.2
Q ss_pred cCcEEEEecceeEEeCCeec-CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~-~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
++|+|+||+||||++.++.+ +.+.++|++++++|++++++| ||+...+.+.++.+|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILAT---GNVLCFARAAAKLIGTS 60 (230)
T ss_pred ceeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCC
Confidence 47899999999999877654 557899999999999999999 89998888888888886
No 66
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.51 E-value=2.3e-13 Score=110.02 Aligned_cols=49 Identities=29% Similarity=0.471 Sum_probs=45.3
Q ss_pred ccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 280 PLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 280 ~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
....+||++..+..+++.++..++++++|||+. +|+++++++|+.+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 91 PFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred ccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 344499999999999999999999999999999 9999999999999875
No 67
>PLN02811 hydrolase
Probab=99.50 E-value=2e-14 Score=127.97 Aligned_cols=53 Identities=17% Similarity=0.310 Sum_probs=48.8
Q ss_pred ccccCCCCHHHHHHHHHHhC---CCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 280 PLVVGKPSTFMMDYLANKFG---IQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 280 ~~~~gKP~~~~~~~~~~~lg---i~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
....+||+|++|..+++++| ++|++|+||||+. .|+++|+++|+.+|+|.+|.
T Consensus 132 ~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~ 187 (220)
T PLN02811 132 EVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPR 187 (220)
T ss_pred hccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccH-hhHHHHHHCCCeEEEEeCCC
Confidence 34458999999999999997 9999999999999 99999999999999998863
No 68
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.49 E-value=1.8e-14 Score=131.64 Aligned_cols=66 Identities=26% Similarity=0.352 Sum_probs=55.8
Q ss_pred cCcEEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 82 SVETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
.+|+|+|||||||++.+.. .+.+.++|++++++|++++++| ||+...+...++.++++. -+++.++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaT---GR~~~~~~~~~~~l~~~~---~~I~~NG 68 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLAT---GRPLPDVLSILEELGLDG---PLITFNG 68 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEEC---CCChHHHHHHHHHcCCCc---cEEEeCC
Confidence 5889999999999987765 4457899999999999999999 899999999999999974 3444444
No 69
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.49 E-value=1.2e-14 Score=133.22 Aligned_cols=69 Identities=17% Similarity=0.274 Sum_probs=56.2
Q ss_pred cCcEEEEecceeEEeCCeec-CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 82 SVETFIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~-~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
++|+|+||+||||++.++.+ +.+.++|++++++|++++++| ||+...+...++.+|++.....+++.++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~~~~~~~I~~NG 71 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTT---GRPYAGVHRYLKELHMEQPGDYCITNNG 71 (270)
T ss_pred ceEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEec---CCChHHHHHHHHHhCCCCCCCeEEEcCC
Confidence 47999999999999876544 557899999999999999999 8999999888899988643233555554
No 70
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.47 E-value=3.2e-13 Score=125.63 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=48.2
Q ss_pred CCCCHHHHHHHHHHhCC-CCCcEEEEccCchhHHHHHHHcCCcEEEEccccC
Q 019928 284 GKPSTFMMDYLANKFGI-QKSQICMVGDRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi-~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
+||+|++++.++++++. .+++|+||||+. +|+++|+++|+.+|+|.+|.|
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g~~ 300 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPGDF 300 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCCCC
Confidence 79999999999999999 689999999999 999999999999999999986
No 71
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.47 E-value=3e-14 Score=120.59 Aligned_cols=98 Identities=22% Similarity=0.218 Sum_probs=69.1
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
++.+.+.+..+++.....+++||.+... ........+.. ..+......+.....||+|++|..+++++|++|++|+
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~-~~~~l~~~~~~---~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRER-IERVLERLGLD---DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHH-HHHHHHHTTHG---GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred hhhhhhhhhhcccccceeEEeecCCccc-ccccccccccc---cccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 3446666777765555566777765422 11122222222 2233333344455589999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEE
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
+|||+. .|+++|+++|+.+|+|
T Consensus 155 ~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 155 FVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEESSH-HHHHHHHHTTSEEEEE
T ss_pred EEeCCH-HHHHHHHHcCCeEEeC
Confidence 999999 9999999999999987
No 72
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.47 E-value=9.5e-13 Score=124.18 Aligned_cols=49 Identities=24% Similarity=0.308 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+||+|.++.++++++++++++++||||+. +|+++|+++|+++|+|....
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARET 151 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECCC
Confidence 89999999999999999999999999999 99999999999999996543
No 73
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.45 E-value=2.2e-12 Score=118.49 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=57.3
Q ss_pred hcCcEEEEecceeEEeCCeec-CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHH
Q 019928 81 DSVETFIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~-~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~ 154 (334)
..+++|++||||||++.++.+ +.+.++|++|+++|++++++| ||+...+...++.+|++. ..+++.+++
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~~~~l~~~~--~~~I~~NGa 74 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCS---SKTAAEMLPLQQTLGLQG--LPLIAENGA 74 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEc---CCCHHHHHHHHHHhCCCC--CcEEEeCCC
Confidence 468999999999999977665 557899999999999999999 899999999999999852 135555543
No 74
>PRK10976 putative hydrolase; Provisional
Probab=99.44 E-value=5.9e-13 Score=121.69 Aligned_cols=57 Identities=25% Similarity=0.367 Sum_probs=50.7
Q ss_pred CcEEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+|+|++||||||++.++. .+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFAT---GRHHVDVGQIRDNLEIK 59 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCChHHHHHHHHhcCCC
Confidence 689999999999987654 4557899999999999999999 89999988888999886
No 75
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.44 E-value=1.7e-13 Score=100.95 Aligned_cols=52 Identities=40% Similarity=0.675 Sum_probs=49.5
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccccC
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
+|||+|.+|..+++++++++++++||||++.+||++|+++|+.+|+|.||.+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~ 53 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVY 53 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSS
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCC
Confidence 5999999999999999999999999999944999999999999999999974
No 76
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.43 E-value=9.2e-13 Score=112.51 Aligned_cols=49 Identities=16% Similarity=0.146 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHh--CCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKF--GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~l--gi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.||.+.++..+.+.+ |++|++|++|||++ .|+++|+++|+.+|+|.+|.
T Consensus 110 ~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 110 AKQLEMILQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred HHHHHHHHHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCc
Confidence 677788888888888 89999999999999 99999999999999998874
No 77
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.42 E-value=2.7e-12 Score=114.15 Aligned_cols=54 Identities=22% Similarity=0.247 Sum_probs=47.1
Q ss_pred EEEecceeEEeCCeec-CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 86 FIFDCDGVIWKGDKLI-DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 86 viFDiDGTL~d~~~~~-~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
|+|||||||+|+++.+ +.+.++|++++++|++++++| ||+...+.+.++.+|++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aT---GR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVT---GNSVQFARALAKLIGTP 55 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCchHHHHHHHHHhCCC
Confidence 5899999999987654 557899999999999999999 89999888888888864
No 78
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.42 E-value=2.9e-13 Score=118.30 Aligned_cols=86 Identities=20% Similarity=0.174 Sum_probs=58.7
Q ss_pred HHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEcc
Q 019928 231 QYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGD 310 (334)
Q Consensus 231 ~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGD 310 (334)
.+.+..+++.+....|+||..... ........+.. ..+....+.+.... ||+|+.|..+++++|+++++|++|||
T Consensus 112 ~~~L~~l~~~g~~~~i~T~~~~~~-~~~~l~~~gl~---~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD 186 (197)
T TIGR01548 112 KGLLRELHRAPKGMAVVTGRPRKD-AAKFLTTHGLE---ILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVGD 186 (197)
T ss_pred HHHHHHHHHcCCcEEEECCCCHHH-HHHHHHHcCch---hhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeC
Confidence 455666665444567888876532 12222222222 33333334444344 99999999999999999999999999
Q ss_pred CchhHHHHHHHc
Q 019928 311 RLDTDILFGQNG 322 (334)
Q Consensus 311 s~~~DI~~a~~a 322 (334)
+. +||++|+++
T Consensus 187 ~~-~Di~aA~~a 197 (197)
T TIGR01548 187 TV-DDIITGRKA 197 (197)
T ss_pred CH-HHHHHHHhC
Confidence 99 999999875
No 79
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.42 E-value=5.4e-12 Score=111.78 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=49.6
Q ss_pred CcEEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+|+|+|||||||++.++ +.+.+.++|++|+++|++++++| ||+...+.+.++.++++
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~T---GR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVT---GNTVPFARALAVLIGTS 58 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEc---CCcchhHHHHHHHhCCC
Confidence 57999999999998765 45668899999999999999999 78888888888888875
No 80
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.41 E-value=5.5e-13 Score=122.39 Aligned_cols=57 Identities=25% Similarity=0.292 Sum_probs=50.9
Q ss_pred CcEEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+|+|+||+||||++.++. .+.+.++|++|+++|+.++++| ||+...+.+.++.+|++
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaT---GR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFAT---GRHVLEMQHILGALSLD 59 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCC
Confidence 789999999999987654 4557899999999999999999 89999998888999986
No 81
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.41 E-value=1.3e-12 Score=109.88 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
.||+|+++..+++++|+++++|++|||+. +|++|++++|+. +.|..+
T Consensus 74 ~~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~ 120 (154)
T TIGR01670 74 QSNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADA 120 (154)
T ss_pred ccchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCc
Confidence 36789999999999999999999999999 999999999986 776543
No 82
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.41 E-value=1.8e-13 Score=114.66 Aligned_cols=45 Identities=24% Similarity=0.359 Sum_probs=40.1
Q ss_pred cCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcC
Q 019928 276 TQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (334)
Q Consensus 276 ~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG 323 (334)
.+.+... +||+|++|.++++++|+++ +|++|||+. .|+++|+++|
T Consensus 110 ~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~-~Di~aa~~aG 154 (154)
T TIGR01549 110 LGSDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNL-NDIEGARNAG 154 (154)
T ss_pred EecCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCH-HHHHHHHHcc
Confidence 3344444 8999999999999999999 999999998 9999999998
No 83
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.41 E-value=1.3e-12 Score=111.19 Aligned_cols=43 Identities=23% Similarity=0.340 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEE
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv 327 (334)
.||+|+.+..+++++|+++++|++|||+. +|++|++.+|+..+
T Consensus 80 ~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~a 122 (169)
T TIGR02726 80 IKKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVA 122 (169)
T ss_pred CCCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEE
Confidence 37889999999999999999999999999 99999999997654
No 84
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.39 E-value=2.4e-12 Score=111.30 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
++++++.+..+++++|+++++|+||||+. +|+++++++|+. +.|.+
T Consensus 94 ~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~-~~v~~ 139 (183)
T PRK09484 94 QSNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLS-VAVAD 139 (183)
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCC
Confidence 34557889999999999999999999999 999999999998 44543
No 85
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.38 E-value=1e-11 Score=114.19 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=51.6
Q ss_pred cCcEEEEecceeEEe-CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWK-GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d-~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
++|.|++||||||++ .....+.+.++|++|+++|++++++| ||++..+...++.+|++
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaT---gR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCT---SKTAAEVEVLRKELGLE 61 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 589999999999998 45567778999999999999999999 78888888888999985
No 86
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.37 E-value=3.1e-12 Score=113.59 Aligned_cols=102 Identities=14% Similarity=0.087 Sum_probs=69.0
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEE
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQIC 306 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi 306 (334)
|+...+.+..+++..-..+|+||...... .........+.+...+.... +....+||+|+.|..+++++|++|++|+
T Consensus 97 ypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~-~~~~~~~~~~~L~~~f~~~f--d~~~g~KP~p~~y~~i~~~lgv~p~e~l 173 (220)
T TIGR01691 97 YPDVPPALEAWLQLGLRLAVYSSGSVPAQ-KLLFGHSDAGNLTPYFSGYF--DTTVGLKTEAQSYVKIAGQLGSPPREIL 173 (220)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHhhccccchhhhcceEE--EeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence 56677778888765445788888754211 00000001112222222111 1123479999999999999999999999
Q ss_pred EEccCchhHHHHHHHcCCcEEEEccc
Q 019928 307 MVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 307 ~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
+|||+. .|+++|+++||++|+|..+
T Consensus 174 fVgDs~-~Di~AA~~AG~~ti~v~r~ 198 (220)
T TIGR01691 174 FLSDII-NELDAARKAGLHTGQLVRP 198 (220)
T ss_pred EEeCCH-HHHHHHHHcCCEEEEEECC
Confidence 999999 9999999999999998654
No 87
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.36 E-value=7.9e-12 Score=110.82 Aligned_cols=43 Identities=21% Similarity=0.175 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEE
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv 327 (334)
++|+|.+|+.+++++++++++|++|||+. +|+++|+++|+..+
T Consensus 150 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 150 ASYKGKTLLILLRKEGISPENTVAVGDGA-NDLSMIKAAGLGIA 192 (219)
T ss_pred CcccHHHHHHHHHHcCCCHHHEEEEECCH-HHHHHHHhCCCeEE
Confidence 67889999999999999999999999999 99999999999743
No 88
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.35 E-value=5.5e-13 Score=114.04 Aligned_cols=73 Identities=14% Similarity=0.128 Sum_probs=51.5
Q ss_pred EEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHc
Q 019928 245 FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (334)
Q Consensus 245 ~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a 322 (334)
.|+||...... .......+...+++.+ ...+....+||+|++|+.+++++|++|++|+||||+. .||++|+++
T Consensus 103 ~i~Tn~~~~~~-~~~l~~~~l~~~fd~v---~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~-~Di~~A~~~ 175 (175)
T TIGR01493 103 AILSNASHWAF-DQFAQQAGLPWYFDRA---FSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQ-WDLIGARKF 175 (175)
T ss_pred hhhhCCCHHHH-HHHHHHCCCHHHHhhh---ccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecCh-hhHHHHhcC
Confidence 36677655321 1122233334444443 3344445689999999999999999999999999998 999999874
No 89
>PLN02887 hydrolase family protein
Probab=99.35 E-value=2.2e-11 Score=121.92 Aligned_cols=64 Identities=17% Similarity=0.200 Sum_probs=54.7
Q ss_pred HHHHhhcCcEEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 76 ADELIDSVETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 76 ~~~~~~~ik~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+....++|+|+|||||||+++++- .+.+.++|++++++|+.++++| ||+...+...++.+|++
T Consensus 301 ~~~~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIAT---GR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 301 LRFYKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIAT---GKARPAVIDILKMVDLA 365 (580)
T ss_pred hhhhccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHhCcc
Confidence 3344578999999999999997654 4557899999999999999999 89999998888888875
No 90
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.34 E-value=3.3e-12 Score=116.14 Aligned_cols=55 Identities=29% Similarity=0.483 Sum_probs=48.0
Q ss_pred EEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+|+|||||||++.++ +.+.+.++|++|+++|+.++++| ||+...+...++.+|++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaT---GR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLAT---GRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEe---CCCHHHHHHHHHHcCCC
Confidence 478999999998765 44567899999999999999999 78888888888998886
No 91
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.34 E-value=6.3e-11 Score=107.40 Aligned_cols=200 Identities=20% Similarity=0.212 Sum_probs=109.9
Q ss_pred EEEEecceeEEe---CC-eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHH
Q 019928 85 TFIFDCDGVIWK---GD-KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLK 160 (334)
Q Consensus 85 ~viFDiDGTL~d---~~-~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~ 160 (334)
+|+.||||||++ ++ +..+...+.+++++++|+.++++| ||+..++.+.++.+++.. ++-+++.+++.... .
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aT---GR~~~~~~~~~~~~~~~~-p~~~I~~NGa~I~~-~ 77 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYST---GRSPHSYKELQKQKPLLT-PDIWVTSVGSEIYY-G 77 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEc---CCCHHHHHHHHhcCCCCC-CCEEEEcCCceEEe-C
Confidence 688999999996 33 445667899999999999999999 899999998888888754 33455555432211 0
Q ss_pred hCCCCCCcEE-EEEeC---cchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHHHHHHh
Q 019928 161 SIDFPKDKKV-YVVGE---DGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQYGTLC 236 (334)
Q Consensus 161 ~~~~~~~~~~-~~~G~---~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~ 236 (334)
. ....+..+ ..++. ......+ ..++... .+. .........+.+..+.......++.....
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l------------~~~--~~~~~~~~k~~~~~~~~~~~~~~~~l~~~ 141 (249)
T TIGR01485 78 G-AEVPDQHWAEYLSEKWQRDIVVAI-TDKFEEL------------KPQ--PDLEQRPHKVSFFLDPEAAPEVIKQLTEM 141 (249)
T ss_pred C-CCcCCHHHHHHHhcccCHHHHHHH-HhcCccc------------ccC--CccccCCeeEEEEechhhhhHHHHHHHHH
Confidence 0 00000000 00000 0001111 1111100 000 00011122222222211111112222222
Q ss_pred HHcCCCc--EEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEccCchh
Q 019928 237 IRENPGC--LFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVGDRLDT 314 (334)
Q Consensus 237 l~~~~g~--~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~ 314 (334)
+.. .+. .++.++... .+....++++..++..+++++|+++++|++|||+. |
T Consensus 142 l~~-~~~~~~~~~~~~~~-------------------------ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~-N 194 (249)
T TIGR01485 142 LKE-TGLDVKLIYSSGKD-------------------------LDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG-N 194 (249)
T ss_pred HHh-cCCCEEEEEECCce-------------------------EEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh-h
Confidence 221 122 222222111 12223388999999999999999999999999999 9
Q ss_pred HHHHHHHcCCcEEEEccc
Q 019928 315 DILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 315 DI~~a~~aG~~tv~V~tG 332 (334)
|++|++.+|..+|.|.++
T Consensus 195 D~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 195 DIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHHccCCcEEEECCC
Confidence 999999988888888664
No 92
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.33 E-value=4.6e-12 Score=106.98 Aligned_cols=48 Identities=25% Similarity=0.383 Sum_probs=40.3
Q ss_pred hcCcEEEEecceeEEe--CCeecCCHHHHHHHHHHCCC--eEEEEeCCCCCC
Q 019928 81 DSVETFIFDCDGVIWK--GDKLIDGVPETLDMLRSKGK--RLVFVTNNSTKS 128 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d--~~~~~~~a~~aL~~L~~~G~--~v~i~Tn~sgrs 128 (334)
..+|+++||.|.||+. ..++.++..++++++++.+. .+.++||++|..
T Consensus 39 ~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS 90 (168)
T ss_pred cCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence 5799999999999964 56667778899999998876 499999987655
No 93
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.33 E-value=3.1e-11 Score=107.26 Aligned_cols=66 Identities=23% Similarity=0.218 Sum_probs=53.7
Q ss_pred EEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHH
Q 019928 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAA 155 (334)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~ 155 (334)
.|++||||||+++++ ..+.+.++|++|+++|++++++| ||++..+...++.+|++. ..+++.+++.
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~T---gR~~~~~~~~~~~l~~~~--~~~I~~NGa~ 67 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCT---SKTAAEVEYLQKALGLTG--DPYIAENGAA 67 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCCC--CcEEEeCCcE
Confidence 379999999999776 45558899999999999999999 788988888889999852 2466666543
No 94
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.30 E-value=5.3e-12 Score=112.77 Aligned_cols=63 Identities=24% Similarity=0.281 Sum_probs=53.5
Q ss_pred EEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
+|+|||||||++.+...+.+.++|++|+++|++++++| ||++.++..+++++|++. .++..++
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~T---gR~~~~~~~~~~~lg~~~---~~I~~NG 63 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVS---SKTRAEQEYYREELGVEP---PFIVENG 63 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEe---CCCHHHHHHHHHHcCCCC---cEEEcCC
Confidence 48999999999977778889999999999999999998 899999999999999853 2444444
No 95
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.27 E-value=1.6e-11 Score=100.02 Aligned_cols=41 Identities=27% Similarity=0.617 Sum_probs=36.3
Q ss_pred cEEEEecceeEEeCC-------------eecCCHHHHHHHHHHCCCeEEEEeCC
Q 019928 84 ETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNN 124 (334)
Q Consensus 84 k~viFDiDGTL~d~~-------------~~~~~a~~aL~~L~~~G~~v~i~Tn~ 124 (334)
|+++||+|||||++. ++++++.+.|+.|+++|++++++||+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~ 54 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN 54 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence 589999999999873 25788999999999999999999983
No 96
>PLN02954 phosphoserine phosphatase
Probab=99.27 E-value=5.6e-11 Score=105.75 Aligned_cols=44 Identities=20% Similarity=0.337 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
++|+|+++..+++++|. ++|++|||+. +|+++++++|+..+...
T Consensus 153 ~~~K~~~i~~~~~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~ 196 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGY--KTMVMIGDGA-TDLEARKPGGADLFIGY 196 (224)
T ss_pred CccHHHHHHHHHHHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEec
Confidence 67888999999999886 6999999999 99999999998866543
No 97
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.26 E-value=2.2e-11 Score=109.46 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=52.0
Q ss_pred EEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHH
Q 019928 85 TFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA 154 (334)
Q Consensus 85 ~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~ 154 (334)
+|++|+||||++.+..++...++++ ++++|++++++| ||+..++.+.+..+++. .++.++..+++
T Consensus 1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaT---GR~~~~v~~~~~~l~l~-~~~~~I~~nGa 65 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIAT---GRSVESAKSRYAKLNLP-SPDVLIARVGT 65 (236)
T ss_pred CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEe---CCCHHHHHHHHHhCCCC-CCCEEEECCCc
Confidence 4789999999997766666666666 689999999999 89999999999999886 23345665554
No 98
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.26 E-value=1.5e-10 Score=105.32 Aligned_cols=63 Identities=19% Similarity=0.163 Sum_probs=53.9
Q ss_pred EEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 85 TFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 85 ~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
.|+|||||||+++++ .++.+.++|++|+++|++++++| ||++..+...++.+|++. .+++.++
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~T---gR~~~~~~~~~~~~~~~~---~~I~~NG 64 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCT---SKTAAEVEYLRKELGLED---PFIVENG 64 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCCCC---cEEEcCC
Confidence 479999999999877 67778999999999999999998 899999999999999852 3555554
No 99
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.23 E-value=3.9e-10 Score=100.97 Aligned_cols=64 Identities=28% Similarity=0.375 Sum_probs=53.2
Q ss_pred EEEecceeEEeCCeecCC-HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHH
Q 019928 86 FIFDCDGVIWKGDKLIDG-VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAA 155 (334)
Q Consensus 86 viFDiDGTL~d~~~~~~~-a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~ 155 (334)
|+||+||||++.+..++. +.++|+.|+++|++++++| ||++..+.+.+..++++ ..++..+++.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~T---GR~~~~~~~~~~~~~~~---~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIAT---GRSYSSIKRLLKELGID---DYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEEC---SSTHHHHHHHHHHTTHC---SEEEEGGGTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEc---cCcccccccccccccch---hhhcccccce
Confidence 689999999986555544 7899999999999999999 89999999999999887 3566666543
No 100
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.22 E-value=9.3e-11 Score=105.08 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=36.1
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
..||++. .+++++|+ ++||||+. +||.+|+++|+++|.|++|.
T Consensus 172 ~~Kp~~~---~~l~~~~i----~i~vGDs~-~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 172 QYQYTKT---QWIQDKNI----RIHYGDSD-NDITAAKEAGARGIRILRAS 214 (237)
T ss_pred CCCCCHH---HHHHhCCC----eEEEeCCH-HHHHHHHHCCCCEEEEEecC
Confidence 3677775 35566776 79999999 99999999999999998874
No 101
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.20 E-value=4e-11 Score=103.20 Aligned_cols=100 Identities=22% Similarity=0.158 Sum_probs=75.6
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCC---cccccCCCCHHHHHHHHHHhCCC-CC
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQR---EPLVVGKPSTFMMDYLANKFGIQ-KS 303 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~---~~~~~gKP~~~~~~~~~~~lgi~-~~ 303 (334)
..|+..+..++. ..+++.||.+.. |....+...|....++.+.+..-. +..+..||++++|+.+.+..|++ |.
T Consensus 103 ~~LRnlLL~l~~--r~k~~FTNa~k~-HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~ 179 (244)
T KOG3109|consen 103 PVLRNLLLSLKK--RRKWIFTNAYKV-HAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPR 179 (244)
T ss_pred HHHHHHHHhCcc--ccEEEecCCcHH-HHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCCcC
Confidence 345555655543 227888999884 445555566665555554443322 35678999999999999999997 99
Q ss_pred cEEEEccCchhHHHHHHHcCCcEEEEcc
Q 019928 304 QICMVGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 304 evi~VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
++++|.||. +.|+.|++.|+++|+|+.
T Consensus 180 ~t~FfDDS~-~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 180 NTYFFDDSE-RNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred ceEEEcCch-hhHHHHHhccceeEEEEe
Confidence 999999999 999999999999999875
No 102
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.19 E-value=8.4e-11 Score=110.19 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=42.0
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEE
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 328 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~ 328 (334)
.+||+++.+..+++++|+++++|++|||+. ||+.|+++||+...+
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY 289 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence 379999999999999999999999999999 999999999987654
No 103
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.19 E-value=4.6e-10 Score=98.42 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=40.2
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcE
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT 326 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~t 326 (334)
.+.+++..+..+++++|++++++++|||+. ||+.|++.+|+..
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~~~~~v 202 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDSG-NDEEMFEVAGLAV 202 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCCce
Confidence 488889999999999999999999999999 9999999999764
No 104
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.17 E-value=2.7e-10 Score=112.69 Aligned_cols=48 Identities=27% Similarity=0.396 Sum_probs=41.2
Q ss_pred hcCcEEEEecceeEEeCC-------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCC
Q 019928 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKS 128 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~-------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs 128 (334)
.+.|+++||+||||+.+. .++|++.+.|+.|++.|+.++++||+++..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~ 226 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIA 226 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccc
Confidence 457899999999999642 247999999999999999999999987754
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.14 E-value=7.6e-10 Score=99.13 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
.||++.. +++.+|+ +++|||+. +|+++|++||+.+|.|.+|
T Consensus 173 ~K~~K~~---~l~~~~i----~I~IGDs~-~Di~aA~~AGi~~I~v~~G 213 (237)
T PRK11009 173 GQYTKTQ---WLKKKNI----RIFYGDSD-NDITAAREAGARGIRILRA 213 (237)
T ss_pred CCCCHHH---HHHhcCC----eEEEcCCH-HHHHHHHHcCCcEEEEecC
Confidence 4566543 4556665 99999999 9999999999999999987
No 106
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.09 E-value=2.8e-10 Score=96.06 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=34.8
Q ss_pred cCCCCHHHHHHHHHHhC----CCCCcEEEEccC-----------chhHHHHHHHcCCcE
Q 019928 283 VGKPSTFMMDYLANKFG----IQKSQICMVGDR-----------LDTDILFGQNGGCKT 326 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lg----i~~~evi~VGDs-----------~~~DI~~a~~aG~~t 326 (334)
+.||.+-+++.+++.++ ++.++++||||+ - .|...|.++|++.
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~-~D~~fA~N~gi~f 152 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSD-SDRKFALNCGIKF 152 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S---HHHHHHHHHT--E
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccCh-hHHHHHHHcCCcc
Confidence 39999999999999997 499999999996 4 8999999999873
No 107
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.08 E-value=1.1e-09 Score=100.21 Aligned_cols=55 Identities=16% Similarity=0.263 Sum_probs=45.6
Q ss_pred cEEEEecceeEEeC------CeecCCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 84 ETFIFDCDGVIWKG------DKLIDGVPETLDMLRS-KGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 84 k~viFDiDGTL~d~------~~~~~~a~~aL~~L~~-~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
.+|+||+||||++. ..+.+.+.++|+.|.+ .|+.++++| ||+...+.+.++.+++
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~S---GR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALIS---GRSMVELDALAKPYRF 76 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEe---CCCHHHHHHhcCcccc
Confidence 48999999999973 3445667899999998 799999999 8999998887766654
No 108
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.07 E-value=4.9e-10 Score=97.64 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 285 KPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 285 KP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
+|+++.+..+++++|++++++++|||+. +|+++|+++|+..+...
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSK-NDLPMFEVADISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEECC
Confidence 4555789999999999999999999999 99999999999665543
No 109
>PTZ00445 p36-lilke protein; Provisional
Probab=99.06 E-value=5.8e-10 Score=96.48 Aligned_cols=48 Identities=15% Similarity=0.276 Sum_probs=45.7
Q ss_pred CCCCHHH--H--HHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFM--M--DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~--~--~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
-||.|.+ | +++++++|+.|+|++.|.|+. ..+++|++.|++++.+..+
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKNALKEGYIALHVTGN 207 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHHHHHCCCEEEEcCCh
Confidence 8999999 9 999999999999999999999 8899999999999998764
No 110
>PTZ00174 phosphomannomutase; Provisional
Probab=99.02 E-value=4e-09 Score=95.52 Aligned_cols=55 Identities=22% Similarity=0.337 Sum_probs=46.9
Q ss_pred hcCcEEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Q 019928 81 DSVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~ 138 (334)
+.+|+|+|||||||+++++ +-+.+.++|++++++|+.++++| ||+...+.+.+..
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaT---GR~~~~i~~~l~~ 58 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVG---GSDYPKIKEQLGE 58 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHhh
Confidence 4589999999999999876 45557899999999999999999 8998888776653
No 111
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.01 E-value=4.3e-09 Score=96.01 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=51.3
Q ss_pred CcEEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 83 VETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
+|.|++||||||+|.+. .++.+.++|++|+++|++++++| ||+..++....+.+|++.
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaT---GRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYS---LRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Confidence 47999999999999554 56668999999999999999999 899999999899999863
No 112
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.99 E-value=2e-08 Score=100.98 Aligned_cols=59 Identities=20% Similarity=0.241 Sum_probs=51.3
Q ss_pred hcCcEEEEecceeEEeCCe-ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 81 DSVETFIFDCDGVIWKGDK-LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~-~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
...|+|++|+||||++.+. ..+.+.++|++++++|++++++| ||+...+...++.+|++
T Consensus 414 ~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIAT---GRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCS---AKTMGEQDLYRNELGIK 473 (694)
T ss_pred ceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEe---CCCHHHHHHHHHHcCCC
Confidence 3568999999999999654 45667899999999999999999 89999888888999875
No 113
>PLN02382 probable sucrose-phosphatase
Probab=98.97 E-value=6.9e-09 Score=100.64 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=41.4
Q ss_pred CCCCHHHHHHHHHHh---CCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKF---GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~l---gi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
+--+...+.++++++ |++++++++|||+. ||++|.+.+|..+|.|.++
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEEcCC
Confidence 333467788899999 99999999999999 9999999999888887654
No 114
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.95 E-value=2.7e-09 Score=100.39 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~ 325 (334)
.||+|+.+..+++.+|+.++++++|||++ .|++++++++-.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLPV 125 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCCC
Confidence 58999999999999999999999999999 999999997754
No 115
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.92 E-value=6.9e-09 Score=86.58 Aligned_cols=38 Identities=13% Similarity=0.017 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~ 325 (334)
+||+ |.++++++|++|++|++|||++ +|+++++++|+.
T Consensus 100 ~KP~---~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~ 137 (148)
T smart00577 100 VKGK---YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP 137 (148)
T ss_pred cCCe---EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence 7886 8999999999999999999999 999999999975
No 116
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.85 E-value=5.3e-09 Score=92.93 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=36.1
Q ss_pred cCCCCHHH----------HHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCc
Q 019928 283 VGKPSTFM----------MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 283 ~gKP~~~~----------~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~ 325 (334)
..||+|.. ...++++++.++++|++|||+. +|+.+|++||+.
T Consensus 131 ~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~-~Di~aa~~Ag~~ 182 (219)
T PRK09552 131 ITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSI-TDLEAAKQADKV 182 (219)
T ss_pred EeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCH-HHHHHHHHCCcc
Confidence 36777654 3578899999999999999999 999999999983
No 117
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.84 E-value=2.6e-08 Score=87.27 Aligned_cols=40 Identities=8% Similarity=-0.034 Sum_probs=32.4
Q ss_pred CCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcE
Q 019928 286 PSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT 326 (334)
Q Consensus 286 P~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~t 326 (334)
|.|.....+++.++..+++|+||||+. +|+++++++|+..
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~-~D~~~~~aa~~~v 167 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSY-NDTTMLGEADAGI 167 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCH-HHHHHHHhCCCCE
Confidence 334455666777777789999999999 9999999999854
No 118
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.84 E-value=3.9e-08 Score=88.92 Aligned_cols=44 Identities=18% Similarity=-0.005 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHc-------CCcEEEEccc
Q 019928 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG-------GCKTLLVLSG 332 (334)
Q Consensus 288 ~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a-------G~~tv~V~tG 332 (334)
...+..++++++++++++++|||+. ||+.|++.+ |..+|.|..|
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~~g 219 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIGSG 219 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEecC
Confidence 5889999999999999999999999 999999999 7778888544
No 119
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.80 E-value=1.3e-08 Score=83.45 Aligned_cols=37 Identities=22% Similarity=0.369 Sum_probs=33.0
Q ss_pred HHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcE
Q 019928 289 FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKT 326 (334)
Q Consensus 289 ~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~t 326 (334)
..|..+++++++.+++|.+|||.+ +|+...++.|+..
T Consensus 86 ~a~~~L~~~~~l~~e~~ayiGDD~-~Dlpvm~~vGls~ 122 (170)
T COG1778 86 AAFEELLKKLNLDPEEVAYVGDDL-VDLPVMEKVGLSV 122 (170)
T ss_pred HHHHHHHHHhCCCHHHhhhhcCcc-ccHHHHHHcCCcc
Confidence 446678999999999999999999 9999999999753
No 120
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.66 E-value=1.7e-07 Score=80.62 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=32.5
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCC
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~ 324 (334)
.|.++++.++.+.+.. ++++++|||+. +|+++|+++++
T Consensus 146 ~g~~K~~~~~~~~~~~---~~~~i~iGD~~-~D~~aa~~~d~ 183 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPK---YQHIIYIGDGV-TDVCPAKLSDV 183 (188)
T ss_pred CCCCHHHHHHHHHhhc---CceEEEECCCc-chhchHhcCCc
Confidence 4666788888887765 89999999999 99999999864
No 121
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.65 E-value=1.6e-07 Score=82.07 Aligned_cols=44 Identities=16% Similarity=0.171 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEE
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLL 328 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~ 328 (334)
|+++...+...+++.++++++|+++||+. +|++|++.+|...+.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSI-SDLPLLSLVGHPYVV 196 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHhCCCcEEe
Confidence 77888889999999999999999999999 999999999976544
No 122
>PLN02423 phosphomannomutase
Probab=98.65 E-value=1.2e-07 Score=85.87 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=41.7
Q ss_pred cCcEEE-EecceeEEeCCeecC-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Q 019928 82 SVETFI-FDCDGVIWKGDKLID-GVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET 138 (334)
Q Consensus 82 ~ik~vi-FDiDGTL~d~~~~~~-~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~ 138 (334)
+++.++ |||||||+++++-++ .+.++|++|++. +.++++| ||+...+.+.+..
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaT---GR~~~~~~~~~~~ 59 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVG---GSDLSKISEQLGK 59 (245)
T ss_pred ccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEEC---CcCHHHHHHHhcc
Confidence 456555 999999999876554 468999999977 9999999 7877777666644
No 123
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.58 E-value=1e-07 Score=84.46 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=34.6
Q ss_pred CCCCHHHH----------HHHHHHhCCCCCcEEEEccCchhHHHHHHHcCC
Q 019928 284 GKPSTFMM----------DYLANKFGIQKSQICMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 284 gKP~~~~~----------~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~ 324 (334)
.||+|..+ ..++++++..+++++||||+. +|+.+|+.||+
T Consensus 128 ~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~-~D~~~a~~Ad~ 177 (214)
T TIGR03333 128 DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSV-TDVEAAKQSDL 177 (214)
T ss_pred eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCH-HHHHHHHhCCe
Confidence 67777665 477888888899999999999 99999999997
No 124
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.55 E-value=4.1e-07 Score=82.44 Aligned_cols=192 Identities=19% Similarity=0.209 Sum_probs=96.2
Q ss_pred cEEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHH----
Q 019928 84 ETFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAY---- 158 (334)
Q Consensus 84 k~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~---- 158 (334)
.+++.|+||||++++.. .....+.++...+.++.++++| ||+...+.+.++..+++ .++.++++.+....+
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~T---GRs~~~~~~~~~~~~l~-~Pd~~I~svGt~I~~~~~~ 78 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVT---GRSLESVLRLLREYNLP-QPDYIITSVGTEIYYGENW 78 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE----SS-HHHHHHHHHHCT-E-E-SEEEETTTTEEEESSTT
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEEC---CCCHHHHHHHHHhCCCC-CCCEEEecCCeEEEEcCCC
Confidence 47999999999944332 1112233333446677888888 89999999999999885 357777765421110
Q ss_pred ------HHhCCCCCCcEEEEEeCcchHHHHHHc-CCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCCCCHHHHH
Q 019928 159 ------LKSIDFPKDKKVYVVGEDGILKELELA-GFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRYFNYYKVQ 231 (334)
Q Consensus 159 ------l~~~~~~~~~~~~~~G~~~~~~~l~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~l~ 231 (334)
-...... + ..+.+.+.+.+. ++.. .+. .......+-...+.......+.
T Consensus 79 ~~d~~w~~~i~~~----w---~~~~v~~~l~~~~~l~~-------------q~~----~~q~~~k~sy~~~~~~~~~~~~ 134 (247)
T PF05116_consen 79 QPDEEWQAHIDER----W---DRERVEEILAELPGLRP-------------QPE----SEQRPFKISYYVDPDDSADILE 134 (247)
T ss_dssp EE-HHHHHHHHTT---------HHHHHHHHHCHCCEEE-------------GGC----CCGCCTCECEEEETTSHCHHHH
T ss_pred cChHHHHHHHHhc----C---ChHHHHHHHHHhhCccc-------------CCc----cccCCeeEEEEEecccchhHHH
Confidence 0000000 0 001122222221 1110 000 0011111111112211111133
Q ss_pred HHHHhHHcCCCcE--EEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 019928 232 YGTLCIRENPGCL--FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMVG 309 (334)
Q Consensus 232 ~~~~~l~~~~g~~--~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~VG 309 (334)
.....+. ..+.. ++.+|... ..+.|... + +..+..++++++++++++++++|
T Consensus 135 ~i~~~l~-~~~l~~~~i~s~~~~------ldilP~~a-----------------~--K~~Al~~L~~~~~~~~~~vl~aG 188 (247)
T PF05116_consen 135 EIRARLR-QRGLRVNVIYSNGRD------LDILPKGA-----------------S--KGAALRYLMERWGIPPEQVLVAG 188 (247)
T ss_dssp HHHHHHH-CCTCEEEEEECTCCE------EEEEETT------------------S--HHHHHHHHHHHHT--GGGEEEEE
T ss_pred HHHHHHH-HcCCCeeEEEcccee------EEEccCCC-----------------C--HHHHHHHHHHHhCCCHHHEEEEe
Confidence 3333333 34553 34333221 12233222 3 36777789999999999999999
Q ss_pred cCchhHHHHHHHcCCcEEEEcc
Q 019928 310 DRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 310 Ds~~~DI~~a~~aG~~tv~V~t 331 (334)
||. ||+.|. ..+.++|.|.+
T Consensus 189 DSg-ND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 189 DSG-NDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp SSG-GGHHHH-CCSSEEEE-TT
T ss_pred CCC-CcHHHH-cCcCCEEEEcC
Confidence 999 999999 77778998865
No 125
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.52 E-value=6.8e-07 Score=76.16 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNG 322 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a 322 (334)
+..++..+...++.+|++++++++|||+. +|+.|++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCH-HHHHHHhcC
Confidence 55567888899999999999999999999 999999864
No 126
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.49 E-value=1e-06 Score=80.27 Aligned_cols=61 Identities=23% Similarity=0.416 Sum_probs=47.1
Q ss_pred cCcEEEEecceeEEeCC---------------------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH
Q 019928 82 SVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGK 134 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~---------------------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~ 134 (334)
+..+|+||||+|++|+. .++|++.+.|+.|++.|++++++||+....+.....
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 45699999999998732 447888999999999999999999876555555555
Q ss_pred HHHHcCCC
Q 019928 135 KFETLGLT 142 (334)
Q Consensus 135 ~l~~lGl~ 142 (334)
.|+.+|++
T Consensus 154 ~Lkk~Gi~ 161 (266)
T TIGR01533 154 NLKRFGFP 161 (266)
T ss_pred HHHHcCcC
Confidence 55555554
No 127
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.49 E-value=1.7e-06 Score=76.47 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEE
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv 327 (334)
++-+-......++.+|+++++++++||+. ||+.|.+.+|...+
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~-nDlpml~~ag~~ia 184 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSA-NDLPMLEAAGLPIA 184 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCch-hhHHHHHhCCCCeE
Confidence 34456778889999999999999999999 99999999997643
No 128
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.49 E-value=2.5e-06 Score=74.98 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
.||.+..+...++..|. ++++|||+. ||+.|++.+|+..++-
T Consensus 129 ~~~~K~~~l~~l~~~~~---~~v~vGDs~-nDl~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYY---RVIAAGDSY-NDTTMLSEAHAGILFH 170 (203)
T ss_pred CcchHHHHHHHHHhhCC---CEEEEeCCH-HHHHHHHhCCCCEEec
Confidence 46666666666676664 899999999 9999999999887654
No 129
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.49 E-value=1.5e-06 Score=73.20 Aligned_cols=45 Identities=27% Similarity=0.383 Sum_probs=38.7
Q ss_pred EEEEecceeEEeCC------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Q 019928 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQY 132 (334)
Q Consensus 85 ~viFDiDGTL~d~~------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~ 132 (334)
.|+|||||||++++ ...+++.+++++++++|++++++| ||+...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~T---GRp~~~~ 57 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLT---ARPIGQA 57 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEc---CCcHHHH
Confidence 48999999999876 567788999999999999999999 6765554
No 130
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.44 E-value=1.1e-06 Score=77.03 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcC
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG 323 (334)
+||++.+|..+++.|++++++|+||||+. ||+.|+++||
T Consensus 177 ~kP~~k~~~~~i~~l~~~~~~v~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 177 GKPEPKIFLRIIKELQVKPGEVAMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp TTTHHHHHHHHHHHHTCTGGGEEEEESSG-GHHHHHHHSS
T ss_pred ccccchhHHHHHHHHhcCCCEEEEEccCH-HHHHHHHhCc
Confidence 79999999999999999999999999999 9999999997
No 131
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.37 E-value=5.8e-06 Score=86.18 Aligned_cols=58 Identities=16% Similarity=0.233 Sum_probs=45.6
Q ss_pred hcCcEEEEecceeEEeCC------eecCCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 81 DSVETFIFDCDGVIWKGD------KLIDGVPETLDMLRS-KGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~------~~~~~a~~aL~~L~~-~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
.+.++|+||+||||++.. .+.+.+.++|++|.+ .|..++++| ||+...+.+.+..+++
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivS---GR~~~~l~~~~~~~~l 554 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIIS---GRDRDTLERWFGDLPI 554 (726)
T ss_pred ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEe---CCCHHHHHHHhCCCCe
Confidence 357899999999999732 123456789999999 599999999 8999988877765543
No 132
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.37 E-value=8.1e-07 Score=81.12 Aligned_cols=71 Identities=15% Similarity=0.241 Sum_probs=57.4
Q ss_pred hhcCcEEEEecceeEEeCCee----cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 80 IDSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 80 ~~~ik~viFDiDGTL~d~~~~----~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
+...++|+||+||||++.++- -|++.++|++|+++|++++++|+ .++..+.+.++.+|++...+.+++.++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvIIs~Gd 197 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDIIISGGH 197 (301)
T ss_pred cccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEEEECCc
Confidence 467889999999999987764 47789999999999999999996 355666778899999865555555543
No 133
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.25 E-value=2.1e-06 Score=69.29 Aligned_cols=44 Identities=20% Similarity=0.313 Sum_probs=34.9
Q ss_pred cEEEEecceeEEeCCe-------ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHH
Q 019928 84 ETFIFDCDGVIWKGDK-------LIDGVPETLDMLRSKGKRLVFVTNNSTKSRK 130 (334)
Q Consensus 84 k~viFDiDGTL~d~~~-------~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~ 130 (334)
|+|+||+||||++.++ ..+.+.++|++++++|+.++++| ||+..
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaT---GR~~~ 52 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISS---SRNMR 52 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEEC---CCCch
Confidence 7999999999997532 23457788888899999999999 55543
No 134
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.07 E-value=9.6e-06 Score=74.24 Aligned_cols=70 Identities=19% Similarity=0.215 Sum_probs=55.6
Q ss_pred hcCcEEEEecceeEEeCCee----cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH
Q 019928 81 DSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF 153 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~----~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~ 153 (334)
.-.+.|+|||||||++.++- -|++.++|++|+++|++++++||+ ++..+...++.+|++...+.++.+..
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEECCC
Confidence 55789999999999987765 377899999999999999999973 45566777899999754455555543
No 135
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.06 E-value=2.6e-05 Score=65.71 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=43.1
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 282 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 282 ~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
.-+|-....|..+++..|+.|.|++++.|++ ..+.+|+.+||+|+++
T Consensus 157 iG~KrE~~SY~kIa~~iGl~p~eilFLSDn~-~EL~AA~~vGl~t~l~ 203 (229)
T COG4229 157 IGKKRESQSYAKIAGDIGLPPAEILFLSDNP-EELKAAAGVGLATGLA 203 (229)
T ss_pred ccccccchhHHHHHHhcCCCchheEEecCCH-HHHHHHHhcchheeee
Confidence 3477778889999999999999999999999 9999999999998776
No 136
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.03 E-value=4.1e-05 Score=80.57 Aligned_cols=55 Identities=22% Similarity=0.363 Sum_probs=43.7
Q ss_pred cCcEEEEecceeEEeCC----eecCCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Q 019928 82 SVETFIFDCDGVIWKGD----KLIDGVPETLDML-RSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~----~~~~~a~~aL~~L-~~~G~~v~i~Tn~sgrs~~~~~~~l~~l 139 (334)
+.++|++|+||||+... ..-++..+.|++| ...|..++++| ||+...+.+.+...
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS---GR~~~~L~~~f~~~ 654 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS---ARSRKTLADWFSPC 654 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe---CCCHHHHHHHhCCC
Confidence 56799999999999654 2234567889988 67789999999 89999998887543
No 137
>PLN02580 trehalose-phosphatase
Probab=98.03 E-value=0.0001 Score=70.50 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=38.7
Q ss_pred EEEEecceeEEe------CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Q 019928 85 TFIFDCDGVIWK------GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (334)
Q Consensus 85 ~viFDiDGTL~d------~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~l 139 (334)
++|||.||||.. .-.+.++..++|+.|.+. .+++|+| ||+...+.+.+.-.
T Consensus 121 ~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVS---GR~~~~L~~~l~~~ 177 (384)
T PLN02580 121 ALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIIS---GRSRDKVYELVGLT 177 (384)
T ss_pred EEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEe---CCCHHHHHHHhCCC
Confidence 788999999974 112234467888888877 4799999 89999998877543
No 138
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.02 E-value=1.3e-05 Score=68.14 Aligned_cols=46 Identities=22% Similarity=0.238 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 287 ~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
+..-|..+.+..|++.++++.|-|.. ..++-.+..|+.+|+|-.|.
T Consensus 109 K~~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 109 KTTHFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp HHHHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS-
T ss_pred hHHHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCC
Confidence 34557778899999999999999999 77888888999999998773
No 139
>PRK08238 hypothetical protein; Validated
Probab=97.82 E-value=0.0002 Score=70.86 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
.||++.. ..+.+.++ .++++++||+. +|+.+++.+| +.+.|..+
T Consensus 124 ~kg~~K~-~~l~~~l~--~~~~~yvGDS~-~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 124 LKGAAKA-AALVEAFG--ERGFDYAGNSA-ADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred cCCchHH-HHHHHHhC--ccCeeEecCCH-HHHHHHHhCC-CeEEECCC
Confidence 5555543 23446665 36699999999 9999999999 88888654
No 140
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.82 E-value=0.00013 Score=66.77 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.2
Q ss_pred HHHHHHHHHhC--CCCCcEEEEccCchhHHHHHHHc
Q 019928 289 FMMDYLANKFG--IQKSQICMVGDRLDTDILFGQNG 322 (334)
Q Consensus 289 ~~~~~~~~~lg--i~~~evi~VGDs~~~DI~~a~~a 322 (334)
.+++.+++.++ .++++|++|||+. +|+.||.-.
T Consensus 196 ~v~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 67778999999 8999999999999 999997654
No 141
>PRK11590 hypothetical protein; Provisional
Probab=97.81 E-value=9.2e-05 Score=65.35 Aligned_cols=36 Identities=17% Similarity=-0.032 Sum_probs=28.1
Q ss_pred HHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 292 DYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 292 ~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
..+-+.+|.+...+.+-|||. +|+.|...+| +.+.|
T Consensus 166 ~~l~~~~~~~~~~~~aY~Ds~-~D~pmL~~a~-~~~~v 201 (211)
T PRK11590 166 AQLERKIGTPLRLYSGYSDSK-QDNPLLYFCQ-HRWRV 201 (211)
T ss_pred HHHHHHhCCCcceEEEecCCc-ccHHHHHhCC-CCEEE
Confidence 334455577778899999999 9999999999 44444
No 142
>PLN03017 trehalose-phosphatase
Probab=97.81 E-value=0.00059 Score=64.79 Aligned_cols=49 Identities=20% Similarity=0.196 Sum_probs=39.0
Q ss_pred cEEEEecceeEE---e-CCe--ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Q 019928 84 ETFIFDCDGVIW---K-GDK--LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF 136 (334)
Q Consensus 84 k~viFDiDGTL~---d-~~~--~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l 136 (334)
-++++|+||||+ + .+. +.++..++|++|. ++.+++++| ||+...+.+.+
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvS---GR~~~~l~~~~ 166 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVT---GRCIDKVYNFV 166 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEe---CCCHHHHHHhh
Confidence 378889999999 3 333 4455778999999 789999999 89988887663
No 143
>PLN02151 trehalose-phosphatase
Probab=97.64 E-value=0.00075 Score=63.88 Aligned_cols=50 Identities=18% Similarity=0.264 Sum_probs=38.9
Q ss_pred cEEEEecceeEE----eCCe--ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Q 019928 84 ETFIFDCDGVIW----KGDK--LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFE 137 (334)
Q Consensus 84 k~viFDiDGTL~----d~~~--~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~ 137 (334)
-++++|+||||. +-+. +.++..++|+.|. .+.+++++| ||+...+.+.+.
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvS---GR~~~~l~~~~~ 154 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVS---GRCREKVSSFVK 154 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEE---CCCHHHHHHHcC
Confidence 478999999999 3333 3445678999998 457899999 899998887763
No 144
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.64 E-value=0.00038 Score=65.71 Aligned_cols=40 Identities=15% Similarity=0.331 Sum_probs=36.4
Q ss_pred HHHHHHHhCCCCCcEEEEccCchhHHHHHH-HcCCcEEEEc
Q 019928 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLVL 330 (334)
Q Consensus 291 ~~~~~~~lgi~~~evi~VGDs~~~DI~~a~-~aG~~tv~V~ 330 (334)
.....+.+|+.++++++|||++.+||.+++ .+|++||+|.
T Consensus 283 ~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 283 LKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred HHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 455778889999999999999999999998 9999999984
No 145
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.54 E-value=0.00031 Score=74.47 Aligned_cols=81 Identities=14% Similarity=0.089 Sum_probs=51.3
Q ss_pred HHHHHHHHHhHHcCCCcE-EEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE
Q 019928 227 YYKVQYGTLCIRENPGCL-FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~-~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev 305 (334)
++...+.+..+++. |+. .++|+..... ...+....|.+... ..-.|+--..++++++.+++++
T Consensus 652 r~~a~~~i~~L~~~-gi~v~~~Tgd~~~~--------------a~~ia~~lgi~~~~-~~~~p~~K~~~i~~l~~~~~~v 715 (834)
T PRK10671 652 RSDSVAALQRLHKA-GYRLVMLTGDNPTT--------------ANAIAKEAGIDEVI-AGVLPDGKAEAIKRLQSQGRQV 715 (834)
T ss_pred hhhHHHHHHHHHHC-CCeEEEEcCCCHHH--------------HHHHHHHcCCCEEE-eCCCHHHHHHHHHHHhhcCCEE
Confidence 45566777777654 554 4555533321 22333333333211 1223444556888888888999
Q ss_pred EEEccCchhHHHHHHHcCC
Q 019928 306 CMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~ 324 (334)
+||||+. ||+.++++||+
T Consensus 716 ~~vGDg~-nD~~al~~Agv 733 (834)
T PRK10671 716 AMVGDGI-NDAPALAQADV 733 (834)
T ss_pred EEEeCCH-HHHHHHHhCCe
Confidence 9999999 99999999998
No 146
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.44 E-value=0.011 Score=60.00 Aligned_cols=82 Identities=12% Similarity=0.001 Sum_probs=48.6
Q ss_pred CHHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE
Q 019928 226 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (334)
Q Consensus 226 ~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev 305 (334)
.++...+.+..+++..-...++|+..... ...+....|.+....-+|.+. ..+++++..++++|
T Consensus 406 l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~--------------a~~ia~~lgi~~~~~~~p~~K--~~~v~~l~~~~~~v 469 (562)
T TIGR01511 406 LRPEAKEVIQALKRRGIEPVMLTGDNRKT--------------AKAVAKELGINVRAEVLPDDK--AALIKELQEKGRVV 469 (562)
T ss_pred ccHHHHHHHHHHHHcCCeEEEEcCCCHHH--------------HHHHHHHcCCcEEccCChHHH--HHHHHHHHHcCCEE
Confidence 46677888888876533455666544321 222222222221111222221 33444454577899
Q ss_pred EEEccCchhHHHHHHHcCC
Q 019928 306 CMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~ 324 (334)
+||||+. ||+.++++||+
T Consensus 470 ~~VGDg~-nD~~al~~A~v 487 (562)
T TIGR01511 470 AMVGDGI-NDAPALAQADV 487 (562)
T ss_pred EEEeCCC-ccHHHHhhCCE
Confidence 9999999 99999999996
No 147
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.39 E-value=0.0014 Score=53.84 Aligned_cols=85 Identities=21% Similarity=0.207 Sum_probs=56.4
Q ss_pred cEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHh-C----CCCCcEEEEccCchhHHH
Q 019928 243 CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKF-G----IQKSQICMVGDRLDTDIL 317 (334)
Q Consensus 243 ~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~l-g----i~~~evi~VGDs~~~DI~ 317 (334)
-.++.+|.--... .-..++.+..++.-.|......++-+|..-....+.+ | ..++|++||||++.+||-
T Consensus 81 ~i~v~SNsaG~~~------~D~d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~ 154 (190)
T KOG2961|consen 81 DIAVFSNSAGLTE------YDHDDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIV 154 (190)
T ss_pred cEEEEecCcCccc------cCCchHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHh
Confidence 3556677544321 1123456777777777665444443343333333332 4 589999999999999999
Q ss_pred HHHHcCCcEEEEcccc
Q 019928 318 FGQNGGCKTLLVLSGK 333 (334)
Q Consensus 318 ~a~~aG~~tv~V~tG~ 333 (334)
+|+..|..+||+.-|+
T Consensus 155 ~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 155 YANRMGSLGVWTEPGV 170 (190)
T ss_pred hhhhccceeEEecccc
Confidence 9999999999997764
No 148
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.37 E-value=0.00022 Score=63.82 Aligned_cols=63 Identities=24% Similarity=0.424 Sum_probs=52.7
Q ss_pred hcCcEEEEecceeEEeC---------------------------CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 019928 81 DSVETFIFDCDGVIWKG---------------------------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~---------------------------~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~ 133 (334)
.+..+|+||||+|++++ ...+|++.+.++.++++|+.|+++||.....+....
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 45779999999999873 366899999999999999999999986666667777
Q ss_pred HHHHHcCCCC
Q 019928 134 KKFETLGLTV 143 (334)
Q Consensus 134 ~~l~~lGl~~ 143 (334)
+-|...|++.
T Consensus 150 ~nL~~~G~~~ 159 (229)
T PF03767_consen 150 KNLKKAGFPG 159 (229)
T ss_dssp HHHHHHTTST
T ss_pred HHHHHcCCCc
Confidence 7788888753
No 149
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.35 E-value=0.00096 Score=57.10 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHH
Q 019928 287 STFMMDYLANKFGIQKSQICMVGDRLDTDILFGQN 321 (334)
Q Consensus 287 ~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~ 321 (334)
+++.+..+.+ +..-+.++||||.- ||++|-.-
T Consensus 160 Ka~~i~~lrk--~~~~~~~~mvGDGa-tDlea~~p 191 (227)
T KOG1615|consen 160 KAEVIALLRK--NYNYKTIVMVGDGA-TDLEAMPP 191 (227)
T ss_pred cHHHHHHHHh--CCChheeEEecCCc-cccccCCc
Confidence 3566666666 77789999999999 99987543
No 150
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.30 E-value=0.00046 Score=61.45 Aligned_cols=63 Identities=14% Similarity=0.230 Sum_probs=48.7
Q ss_pred hcCcEEEEecceeEEeCC---------------------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 019928 81 DSVETFIFDCDGVIWKGD---------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~---------------------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~ 133 (334)
...++|+||+|-|++++. ..+|++.++++.++++|+.++++|+.+...+....
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 357899999999999841 33677788999999999999999954333344467
Q ss_pred HHHHHcCCCC
Q 019928 134 KKFETLGLTV 143 (334)
Q Consensus 134 ~~l~~lGl~~ 143 (334)
+.|...|++.
T Consensus 155 ~nL~~~G~~~ 164 (229)
T TIGR01675 155 DNLINAGFTG 164 (229)
T ss_pred HHHHHcCCCC
Confidence 7788888874
No 151
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=97.27 E-value=0.00022 Score=60.33 Aligned_cols=36 Identities=6% Similarity=-0.014 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEE
Q 019928 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 291 ~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv 327 (334)
|.+.++.+|.++++|++|||++ .|+.++.++|+...
T Consensus 101 ~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 101 YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIK 136 (162)
T ss_pred EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecC
Confidence 4456777888999999999999 99999999998743
No 152
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.20 E-value=0.0035 Score=63.49 Aligned_cols=57 Identities=23% Similarity=0.350 Sum_probs=42.8
Q ss_pred cCcEEEEecceeEEe----CCeecCCHHHHHHHHHHCC-CeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G-~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
....+.+..||++.- .+.+.|++.+.|+.|++.| +++.++|| .+.......++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCC
Confidence 456788899988765 5778999999999999999 99999995 344444433455554
No 153
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0074 Score=55.02 Aligned_cols=57 Identities=18% Similarity=0.225 Sum_probs=40.6
Q ss_pred cCcEEEEecceeEEeCC----ee--cCCHHHHHHHHHHCCC-eEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 82 SVETFIFDCDGVIWKGD----KL--IDGVPETLDMLRSKGK-RLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~----~~--~~~a~~aL~~L~~~G~-~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
+-++++||.||||.+-- .. .++..+.|+.|.+..- .++++| ||+.+++.+++.-.|+
T Consensus 17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiS---GR~~~~l~~~~~v~~i 80 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIIS---GRSLAELERLFGVPGI 80 (266)
T ss_pred cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEe---CCCHHHHHHhcCCCCc
Confidence 45699999999998732 11 2334577888877743 577888 8999998887764444
No 154
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.12 E-value=0.0011 Score=57.96 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=48.7
Q ss_pred hcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
..+.+||.|+||||++-.--+..|...+.+|+..|++++++| +.++.+.....+++|++.
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~S---SKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCS---SKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEec---cchHHHHHHHHHhcCCCC
Confidence 356799999999999822224448889999999999999999 677888777778999973
No 155
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.07 E-value=0.00082 Score=56.20 Aligned_cols=42 Identities=24% Similarity=0.398 Sum_probs=36.4
Q ss_pred EEEEecceeEEeCC------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCH
Q 019928 85 TFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSR 129 (334)
Q Consensus 85 ~viFDiDGTL~d~~------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~ 129 (334)
.|++|+||||+.++ ...+++.+..+++.++|+++.++| +|+.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlT---aRp~ 54 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLT---ARPI 54 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEEC---cCcH
Confidence 48999999999874 457889999999999999999999 5654
No 156
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.03 E-value=0.0015 Score=59.39 Aligned_cols=62 Identities=18% Similarity=0.354 Sum_probs=47.9
Q ss_pred cCcEEEEecceeEEeC-------------------C---------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Q 019928 82 SVETFIFDCDGVIWKG-------------------D---------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG 133 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~-------------------~---------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~ 133 (334)
..++|+||+|+|++++ + ..+|++.+..+.+++.|+.++++||.....+....
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 4689999999999952 1 22566778899999999999999975554555666
Q ss_pred HHHHHcCCCC
Q 019928 134 KKFETLGLTV 143 (334)
Q Consensus 134 ~~l~~lGl~~ 143 (334)
+-|...|++.
T Consensus 180 ~NL~kaGy~~ 189 (275)
T TIGR01680 180 ANLKKAGYHT 189 (275)
T ss_pred HHHHHcCCCC
Confidence 7778888864
No 157
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=96.63 E-value=0.0052 Score=55.08 Aligned_cols=48 Identities=17% Similarity=-0.019 Sum_probs=30.7
Q ss_pred CCCCHHHHHHHHHHhCCC---CCcEEEEccCchhHHHHHHHcCCc-----EEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQ---KSQICMVGDRLDTDILFGQNGGCK-----TLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~---~~evi~VGDs~~~DI~~a~~aG~~-----tv~V~tG 332 (334)
+..+..+...+++.++.. +.-++++||+. +|-.|.+.+.=. +|.|.++
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~-tDE~~f~~~~~~~~~~~~i~V~~~ 218 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDR-TDEDAFRALRELEEGGFGIKVGSV 218 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSH-HHHHHHHTTTTS----EEEEES--
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCC-CCHHHHHHHHhcccCCCCeEEEee
Confidence 334567777788888775 78899999999 999999987664 5666553
No 158
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.55 E-value=0.19 Score=52.74 Aligned_cols=79 Identities=14% Similarity=0.097 Sum_probs=44.4
Q ss_pred HHHHHHHHHhHHcCCCcE-EEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcE
Q 019928 227 YYKVQYGTLCIRENPGCL-FIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQI 305 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~-~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~ev 305 (334)
.+...+.+..+++. |+. .+.|+..... ...+....|.+...--.|. -=..+++.++ +.++|
T Consensus 570 r~~a~~~i~~L~~~-gi~~~llTGd~~~~--------------a~~ia~~lgi~~~~~~~p~--~K~~~v~~l~-~~~~v 631 (741)
T PRK11033 570 RADARQAISELKAL-GIKGVMLTGDNPRA--------------AAAIAGELGIDFRAGLLPE--DKVKAVTELN-QHAPL 631 (741)
T ss_pred chhHHHHHHHHHHC-CCEEEEEcCCCHHH--------------HHHHHHHcCCCeecCCCHH--HHHHHHHHHh-cCCCE
Confidence 55677778888764 554 4444433211 3333333333321112231 1111444444 34689
Q ss_pred EEEccCchhHHHHHHHcCC
Q 019928 306 CMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 306 i~VGDs~~~DI~~a~~aG~ 324 (334)
+||||+. ||..++++|++
T Consensus 632 ~mvGDgi-NDapAl~~A~v 649 (741)
T PRK11033 632 AMVGDGI-NDAPAMKAASI 649 (741)
T ss_pred EEEECCH-HhHHHHHhCCe
Confidence 9999999 99999999993
No 159
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.54 E-value=0.035 Score=44.65 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=35.2
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
++...-|.++||..+.++++++.+.|+.|.+. +.++++|.
T Consensus 14 vd~~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASg 53 (152)
T COG4087 14 VDSKAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASG 53 (152)
T ss_pred EeeecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecC
Confidence 34556788999999999999999999999999 99999884
No 160
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.39 E-value=0.065 Score=48.04 Aligned_cols=43 Identities=12% Similarity=0.156 Sum_probs=29.9
Q ss_pred HHHHHHHHHH---hCCCCCcEEEEccCchhHHHHHHHcCCc-EEEEcc
Q 019928 288 TFMMDYLANK---FGIQKSQICMVGDRLDTDILFGQNGGCK-TLLVLS 331 (334)
Q Consensus 288 ~~~~~~~~~~---lgi~~~evi~VGDs~~~DI~~a~~aG~~-tv~V~t 331 (334)
...++..++. -|+.-+++++|||.. ||.=.+...+-. .++...
T Consensus 152 ~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 152 GKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred HHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecCC
Confidence 4555556555 377889999999999 999777765542 454443
No 161
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.35 E-value=0.0084 Score=52.90 Aligned_cols=31 Identities=16% Similarity=-0.073 Sum_probs=23.8
Q ss_pred HhCCCCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 297 KFGIQKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 297 ~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
.+|.+.+.+.+-|||. +|+.|...+|- .+.|
T Consensus 170 ~~~~~~~~~~aYsDS~-~D~pmL~~a~~-~~~V 200 (210)
T TIGR01545 170 KIGSPLKLYSGYSDSK-QDNPLLAFCEH-RWRV 200 (210)
T ss_pred HhCCChhheEEecCCc-ccHHHHHhCCC-cEEE
Confidence 3344556789999999 99999999994 3444
No 162
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.32 E-value=0.028 Score=60.12 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=44.9
Q ss_pred cCcEEEEecc---------eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Q 019928 82 SVETFIFDCD---------GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (334)
Q Consensus 82 ~ik~viFDiD---------GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~ 144 (334)
..+.+.|=.+ |.+.-.+++.+++.++++.|++.|+++.++| |-++.......+++|+...
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miT---GD~~~tA~~ia~~~Gi~~~ 570 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMIT---GDSQETAVSIARRLGMPSK 570 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCCC
Confidence 4566665433 4555578889999999999999999999999 4556666656688888643
No 163
>COG4996 Predicted phosphatase [General function prediction only]
Probab=96.16 E-value=0.015 Score=46.76 Aligned_cols=56 Identities=29% Similarity=0.415 Sum_probs=44.7
Q ss_pred EEEEecceeEEeCC-------------------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Q 019928 85 TFIFDCDGVIWKGD-------------------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (334)
Q Consensus 85 ~viFDiDGTL~d~~-------------------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~l 139 (334)
+|.||.||||||-+ ++++.+.+.++.++..|.-+...|.| -++...+.|+.+
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN---~~~kA~~aLral 78 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN---FEDKAIKALRAL 78 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC---chHHHHHHHHHh
Confidence 78999999999932 56788899999999999999888864 355566667887
Q ss_pred CCCC
Q 019928 140 GLTV 143 (334)
Q Consensus 140 Gl~~ 143 (334)
++..
T Consensus 79 ~~~~ 82 (164)
T COG4996 79 DLLQ 82 (164)
T ss_pred chhh
Confidence 7753
No 164
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=95.97 E-value=0.13 Score=55.28 Aligned_cols=63 Identities=13% Similarity=0.204 Sum_probs=42.2
Q ss_pred EecceeEEeCCeecCCH-HHHHHHHH----HCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CcCcEEecHHHHHHH
Q 019928 88 FDCDGVIWKGDKLIDGV-PETLDMLR----SKGKRLVFVTNNSTKSRKQYGKKFETLGLTV-TEEEIFASSFAAAAY 158 (334)
Q Consensus 88 FDiDGTL~d~~~~~~~a-~~aL~~L~----~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~-~~~~i~~~~~~~~~~ 158 (334)
.|||.| .+ ...+ .+.++.++ ...+-++++| ||+...+.+.+++.|+++ .++.+|++.+....|
T Consensus 777 ~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aT---GR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy 845 (1050)
T TIGR02468 777 VDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILST---SMTISEIQSFLKSGGLNPTDFDALICNSGSELYY 845 (1050)
T ss_pred eccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEc---CCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceec
Confidence 699999 22 1222 23344444 2225567777 899999999999999985 678888776644433
No 165
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.91 E-value=0.087 Score=44.97 Aligned_cols=29 Identities=14% Similarity=0.279 Sum_probs=22.1
Q ss_pred HHHHhCCCCCcEEEEccCchhHHHHHHHcC
Q 019928 294 LANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (334)
Q Consensus 294 ~~~~lgi~~~evi~VGDs~~~DI~~a~~aG 323 (334)
+...|.-.++.+++.||+. .|+.+|+..-
T Consensus 151 vI~~l~e~~e~~fy~GDsv-sDlsaaklsD 179 (220)
T COG4359 151 VIHELSEPNESIFYCGDSV-SDLSAAKLSD 179 (220)
T ss_pred hHHHhhcCCceEEEecCCc-ccccHhhhhh
Confidence 3444445667799999999 9999998653
No 166
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.89 E-value=0.016 Score=51.45 Aligned_cols=63 Identities=17% Similarity=0.395 Sum_probs=52.4
Q ss_pred cCcEEEEecceeEEeC---------------------------CeecCCHHHHHHHHHHCCCeEEEEeCCCCCC-HHHHH
Q 019928 82 SVETFIFDCDGVIWKG---------------------------DKLIDGVPETLDMLRSKGKRLVFVTNNSTKS-RKQYG 133 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~---------------------------~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs-~~~~~ 133 (334)
+.++|+.|+|-|++|. .+.+|+|.++++-.-++|..++++||..-.. .....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 4559999999999994 2668999999999999999999999966666 45667
Q ss_pred HHHHHcCCCCC
Q 019928 134 KKFETLGLTVT 144 (334)
Q Consensus 134 ~~l~~lGl~~~ 144 (334)
+-|.+.|++..
T Consensus 158 ~nLk~~g~~~~ 168 (274)
T COG2503 158 ENLKSEGLPQV 168 (274)
T ss_pred HHHHHcCcccc
Confidence 77888999753
No 167
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.86 E-value=0.13 Score=46.77 Aligned_cols=47 Identities=13% Similarity=0.228 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHH----HHHcCCcEEEEcc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILF----GQNGGCKTLLVLS 331 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~----a~~aG~~tv~V~t 331 (334)
|-++.+++...+++.|..|+.+|+|.|+. ..+.. .+..|+..+++.+
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEEE
Confidence 45557889999999999999999999999 66654 3456766665543
No 168
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.71 E-value=0.07 Score=53.88 Aligned_cols=88 Identities=9% Similarity=-0.011 Sum_probs=54.5
Q ss_pred CCHHHHHHHHHhHHcCCC-cEEEEecCCcccccccchhccccchHHHHhHhhcCCccccc-CCCCHHHHHHHHHHhCCCC
Q 019928 225 FNYYKVQYGTLCIRENPG-CLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV-GKPSTFMMDYLANKFGIQK 302 (334)
Q Consensus 225 ~~~~~l~~~~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~-gKP~~~~~~~~~~~lgi~~ 302 (334)
..++...+.+..+++..- ...++|+..... ...+....|.+.... -.|.+ -..++++++.+.
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~--------------a~~i~~~lgi~~~f~~~~p~~--K~~~i~~l~~~~ 425 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAV--------------AERVARELGIDEVHAELLPED--KLEIVKELREKY 425 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHH--------------HHHHHHHcCChhhhhccCcHH--HHHHHHHHHhcC
Confidence 457888888989887543 456667654422 222222222222111 12222 244666777777
Q ss_pred CcEEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 303 SQICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 303 ~evi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
++++||||+. ||+.++++||+ .|..|
T Consensus 426 ~~v~~vGDg~-nD~~al~~A~v---gia~g 451 (536)
T TIGR01512 426 GPVAMVGDGI-NDAPALAAADV---GIAMG 451 (536)
T ss_pred CEEEEEeCCH-HHHHHHHhCCE---EEEeC
Confidence 8999999999 99999999994 55444
No 169
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.08 E-value=0.17 Score=41.86 Aligned_cols=87 Identities=31% Similarity=0.439 Sum_probs=61.8
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
++++++.+.|+.|++.|++++++||+ ++..+...++.+|+....+.++.+. ......++..++.. ..
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p-~~ 152 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPP-EE 152 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSG-GG
T ss_pred chhhhhhhhhhhcccccceeEEeecC---CcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCc-ce
Confidence 67899999999999999999999985 4666777889999985556776654 33444555556654 34
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ....+..++.|++.
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEE
T ss_pred EEEEeCCHHHHHHHHHcCCeE
Confidence 555554 44566667777754
No 170
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=94.99 E-value=0.21 Score=53.81 Aligned_cols=44 Identities=16% Similarity=0.284 Sum_probs=36.1
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
.+.+.+++.++++.+++.|+++.++| |.+........+.+|+..
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMIT---GDNKETAEAICRRIGIFS 578 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEec---CCCHHHHHHHHHHcCCCC
Confidence 56778889999999999999999999 556666666668888854
No 171
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=94.79 E-value=0.029 Score=47.97 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=19.3
Q ss_pred CCCCCcEEEEccCchhHHHHHH
Q 019928 299 GIQKSQICMVGDRLDTDILFGQ 320 (334)
Q Consensus 299 gi~~~evi~VGDs~~~DI~~a~ 320 (334)
+...+.+++|||+. +|+.|++
T Consensus 172 ~~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSG-GGHHHHH
T ss_pred CCCCCeEEEEECCH-HHHHHhC
Confidence 77889999999999 9999986
No 172
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.67 E-value=0.79 Score=40.60 Aligned_cols=42 Identities=29% Similarity=0.429 Sum_probs=33.0
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTV 143 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~ 143 (334)
+-++.|+|.++++.|++.--++++-| |..++...+ .-+|++.
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~ST-----SY~qy~~r~a~~ig~Pr 123 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVIST-----SYTQYLRRTASMIGVPR 123 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEec-----cHHHHHHHHHHhcCCCc
Confidence 35778999999999999877777766 778887777 5577754
No 173
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.41 E-value=0.12 Score=47.15 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=52.9
Q ss_pred hhcCcEEEEecceeEEeCCee----cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH
Q 019928 80 IDSVETFIFDCDGVIWKGDKL----IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS 152 (334)
Q Consensus 80 ~~~ik~viFDiDGTL~d~~~~----~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~ 152 (334)
+.....|+||+|-||++.... .|.+.+.|..|++.|..+++=|. -+++.+.+-+++++++-..+.+++.+
T Consensus 119 ~~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred CCCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCC
Confidence 456779999999999964432 35567999999999988888774 46777888889999885455555544
No 174
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.18 E-value=0.027 Score=47.09 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=28.8
Q ss_pred cEEEEecceeEEeCCe--------------------ecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 84 ETFIFDCDGVIWKGDK--------------------LIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 84 k~viFDiDGTL~d~~~--------------------~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
|+++||+||||+.+.. .-|++.+.|+.+.+. +.+++.|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~ 59 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTS 59 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-S
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEe
Confidence 5899999999997431 358889999998444 89999996
No 175
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=94.00 E-value=0.1 Score=45.14 Aligned_cols=29 Identities=34% Similarity=0.542 Sum_probs=21.1
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTK 127 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgr 127 (334)
+.+|+|.++|++|.+.|..++++|.....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56788999999999999888877754433
No 176
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=93.59 E-value=0.71 Score=39.74 Aligned_cols=87 Identities=21% Similarity=0.267 Sum_probs=57.3
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.++|+.|++.|+++.++||+ +...+...++.+|+....+.++++. ......++..++.. ..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p-~~ 167 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPP-DE 167 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCCh-hh
Confidence 56899999999999999999999984 3445566678899864445566543 22234444555543 33
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. .......+..|++.
T Consensus 168 ~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 168 VLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEEEeCCHHHHHHHHHCCCcE
Confidence 555654 33445566777754
No 177
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=93.45 E-value=0.24 Score=41.64 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=28.9
Q ss_pred HHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcc
Q 019928 294 LANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 294 ~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
+.+.+.++ +.++|+.+|-.+.|+++|+..+++.|
T Consensus 129 ~vrth~id----lf~ed~~~na~~iAk~~~~~vilins 162 (194)
T COG5663 129 AVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINS 162 (194)
T ss_pred hhHhhccC----ccccccCchHHHHHHhcCCcEEEecC
Confidence 55666664 78999999999999999999999876
No 178
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=93.31 E-value=0.046 Score=47.46 Aligned_cols=31 Identities=16% Similarity=0.350 Sum_probs=22.9
Q ss_pred CcEEEEecceeEEeCCeec--CCHHHHHHHHHH
Q 019928 83 VETFIFDCDGVIWKGDKLI--DGVPETLDMLRS 113 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~--~~a~~aL~~L~~ 113 (334)
+++|+||.||||+++...+ +....+++.+.+
T Consensus 1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~~~~ 33 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVAPPSNEAALAIAAA 33 (215)
T ss_dssp ESEEEEECCTTTBESHHEEESCSHHHHHHHHHH
T ss_pred CeEEEEecCCCcccCeEEEEeccHHHHHHHHHH
Confidence 5799999999999988777 445544444433
No 179
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=93.05 E-value=0.11 Score=49.34 Aligned_cols=63 Identities=29% Similarity=0.512 Sum_probs=47.5
Q ss_pred hcCcEEEEecceeEEeCC-------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHH-----HHHHH----HHH
Q 019928 81 DSVETFIFDCDGVIWKGD-------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRK-----QYGKK----FET 138 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~-------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~-----~~~~~----l~~ 138 (334)
..-|.+-||+||||+|+. -+++....-++.|.+.|+.++|-||+.+..+. ++.++ ...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an 152 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN 152 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh
Confidence 456789999999999843 34666778899999999999999998877543 23333 345
Q ss_pred cCCCC
Q 019928 139 LGLTV 143 (334)
Q Consensus 139 lGl~~ 143 (334)
+|+++
T Consensus 153 l~vPi 157 (422)
T KOG2134|consen 153 LGVPI 157 (422)
T ss_pred cCCce
Confidence 77775
No 180
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=93.02 E-value=0.76 Score=41.41 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=57.5
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (334)
++|++.+.|+.|++.|+++.++||+ +...+...++.+|+....+.++++. ......++..+... ..+
T Consensus 109 l~pgv~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~-~~~ 184 (248)
T PLN02770 109 PLNGLYKLKKWIEDRGLKRAAVTNA---PRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSK-DHT 184 (248)
T ss_pred cCccHHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCCh-hHE
Confidence 4678889999999999999999983 4556666778899875455555543 22334455555543 335
Q ss_pred EEEeC-cchHHHHHHcCCcc
Q 019928 171 YVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 171 ~~~G~-~~~~~~l~~~G~~~ 189 (334)
+++|. ....+..+.+|+..
T Consensus 185 l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 185 FVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred EEEcCCHHHHHHHHHCCCEE
Confidence 55554 44556667788865
No 181
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=92.86 E-value=0.94 Score=39.23 Aligned_cols=89 Identities=26% Similarity=0.324 Sum_probs=58.7
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEec---------HHHHHHHHHhCCCCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKD 167 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~---------~~~~~~~l~~~~~~~~ 167 (334)
.-++++++.+.|+.|++.|++++++||+ +...+...++.+|+.-..+.++++ .......++..++..
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~- 148 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPP- 148 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCCh-
Confidence 3467899999999999999999999984 344455667888886433444443 223334455555543
Q ss_pred cEEEEEeCc-chHHHHHHcCCcc
Q 019928 168 KKVYVVGED-GILKELELAGFQY 189 (334)
Q Consensus 168 ~~~~~~G~~-~~~~~l~~~G~~~ 189 (334)
..++++|.. ...+..+..|++.
T Consensus 149 ~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 149 EDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred hheEEEcCCHHHHHHHHHcCCeE
Confidence 445666643 4566677788764
No 182
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.57 E-value=0.88 Score=39.29 Aligned_cols=85 Identities=18% Similarity=0.207 Sum_probs=55.3
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.++|+.|++.|+++.++||.. ......++.+|+....+.++.+. ......++..+... ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~----~~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~-~~ 179 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFD----SRLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISP-EE 179 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCc----hhHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCCh-hH
Confidence 678999999999999999999999843 23455678888864445555432 22333444555433 34
Q ss_pred EEEEeCc--chHHHHHHcCCc
Q 019928 170 VYVVGED--GILKELELAGFQ 188 (334)
Q Consensus 170 ~~~~G~~--~~~~~l~~~G~~ 188 (334)
++++|.. ...+..+..|++
T Consensus 180 ~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 180 ALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred EEEECCCchHHHHHHHHcCCe
Confidence 5666654 245566667764
No 183
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=92.51 E-value=0.39 Score=45.63 Aligned_cols=55 Identities=16% Similarity=0.295 Sum_probs=40.2
Q ss_pred cCcEEEEecceeEEeCCeec-CC--HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Q 019928 82 SVETFIFDCDGVIWKGDKLI-DG--VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF 136 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~-~~--a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l 136 (334)
+.|.|.||-|+||++....+ +. ....|-.|-+.|+.+.|+|..+-.....+.++|
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~RL 203 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEERL 203 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHHHH
Confidence 68899999999999755544 33 457777888999999999974444444454444
No 184
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=92.31 E-value=0.81 Score=38.67 Aligned_cols=86 Identities=16% Similarity=0.178 Sum_probs=54.9
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCc
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (334)
..++|++.+.|+.|++.|+++.++||+ ......++.+|+.-..+.++.+. ......++..+.....
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 161 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNE 161 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 457899999999999999999999974 34555678888864445555432 1223344455554333
Q ss_pred EEEEEe-CcchHHHHHHcCCcc
Q 019928 169 KVYVVG-EDGILKELELAGFQY 189 (334)
Q Consensus 169 ~~~~~G-~~~~~~~l~~~G~~~ 189 (334)
++++| .....+..+..|++.
T Consensus 162 -~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 162 -CVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred -eEEEeCcHhhHHHHHHCCCeE
Confidence 44455 344556666677653
No 185
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=92.23 E-value=0.92 Score=40.21 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=42.3
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
-.|-.-..|..+.+.+|.++.|++..-|.. .-..+|+.+|+++.++.
T Consensus 178 G~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~-~Ea~aa~~aGl~a~l~~ 224 (254)
T KOG2630|consen 178 GLKVESQSYKKIGHLIGKSPREILFLTDVP-REAAAARKAGLQAGLVS 224 (254)
T ss_pred cceehhHHHHHHHHHhCCChhheEEeccCh-HHHHHHHhcccceeeee
Confidence 356677889999999999999999999999 99999999999987764
No 186
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=92.13 E-value=1.1 Score=39.04 Aligned_cols=87 Identities=20% Similarity=0.184 Sum_probs=57.5
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEec---------HHHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.+.|+.|++.|++++++||+ ....+...++.+|+....+.++.+ .......+...+... ..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~-~~ 157 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP-EE 157 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH-HH
Confidence 35788999999999999999999984 355666678889987544444442 123334455555543 34
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ....+..+..|+..
T Consensus 158 ~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 158 ALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred EEEECCCHHHHHHHHHCCCeE
Confidence 555654 44566667778764
No 187
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=91.87 E-value=1.2 Score=39.00 Aligned_cols=87 Identities=25% Similarity=0.301 Sum_probs=59.5
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
.++|++.+.|+.|++.|+++.++||+. .......++.+|+....+.++++. ......++..++.. ..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~ 169 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGL---PVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKP-EE 169 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCCh-hh
Confidence 578899999999999999999999843 334555678888865445555442 23334555566543 44
Q ss_pred EEEEeCc--chHHHHHHcCCcc
Q 019928 170 VYVVGED--GILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~~--~~~~~l~~~G~~~ 189 (334)
++++|.. ......+..|+..
T Consensus 170 ~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred EEEECCChHHHHHHHHHCCCEE
Confidence 6677754 3566777788865
No 188
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=91.87 E-value=1.3 Score=38.41 Aligned_cols=89 Identities=24% Similarity=0.268 Sum_probs=59.5
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCc
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (334)
.+++|++.+.|+.|++.|+++.++||+ +.......++.+|+....+.++.+. ......++..+... .
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~-~ 159 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAP-Q 159 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCCh-h
Confidence 467899999999999999999999973 4455666678888854344444332 23445566666543 3
Q ss_pred EEEEEeC-cchHHHHHHcCCccc
Q 019928 169 KVYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
.++++|. ....+..+..|++.+
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEE
Confidence 3556664 445667777888653
No 189
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=91.84 E-value=1.1 Score=40.70 Aligned_cols=86 Identities=13% Similarity=0.193 Sum_probs=57.0
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (334)
+++++.+.|+.|++.|++++++||+ +...+...++.+|+.-..+.++++. ......++..++...+ +
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~-~ 185 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTR---PRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPER-C 185 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCc---CHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHH-e
Confidence 4688889999999999999999984 3445556678888864445555443 2233445555654433 4
Q ss_pred EEEe-CcchHHHHHHcCCcc
Q 019928 171 YVVG-EDGILKELELAGFQY 189 (334)
Q Consensus 171 ~~~G-~~~~~~~l~~~G~~~ 189 (334)
+++| ...-.+..+.+|+..
T Consensus 186 l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEE
Confidence 5555 445567777788865
No 190
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=91.80 E-value=1.1 Score=39.84 Aligned_cols=85 Identities=19% Similarity=0.303 Sum_probs=55.0
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (334)
++|++.+.|+.|+++|+++.++||+ ++......++.+|+....+.++.+. ......++..++.. +.+
T Consensus 94 ~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p-~~~ 169 (224)
T PRK14988 94 LREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKA-ERT 169 (224)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCCh-HHE
Confidence 3578889999999999999999984 3445555678888864445555432 22334455566544 335
Q ss_pred EEEeC-cchHHHHHHcCCc
Q 019928 171 YVVGE-DGILKELELAGFQ 188 (334)
Q Consensus 171 ~~~G~-~~~~~~l~~~G~~ 188 (334)
+++|. ..-.+..+.+|+.
T Consensus 170 l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEEcCCHHHHHHHHHcCCe
Confidence 55553 3445666777885
No 191
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=91.55 E-value=1.1 Score=39.33 Aligned_cols=87 Identities=9% Similarity=0.099 Sum_probs=57.8
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
.++|++.+.|+.|++.|++++++||+. ...+...++.+|+.-..+.++++. ......++..++.. ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~ 167 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASP---LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDP-LT 167 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCH-HH
Confidence 467889999999999999999999843 344555667788865455555432 23445556666643 33
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ....+..+.+|++.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRS 188 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEE
Confidence 555553 44567777888865
No 192
>PRK11587 putative phosphatase; Provisional
Probab=91.36 E-value=2.5 Score=37.01 Aligned_cols=86 Identities=17% Similarity=0.133 Sum_probs=53.4
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH---------HHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~---------~~~~~l~~~~~~~~~~ 169 (334)
+++|++.+.|+.|+++|+++.++||++. ......++..|+.. .+.+++... .....++..++...+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~---~~~~~~l~~~~l~~-~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~- 157 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSV---PVASARHKAAGLPA-PEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE- 157 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCc---hHHHHHHHhcCCCC-ccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc-
Confidence 4578899999999999999999999543 23344567777753 234444321 122334445554433
Q ss_pred EEEEe-CcchHHHHHHcCCcc
Q 019928 170 VYVVG-EDGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G-~~~~~~~l~~~G~~~ 189 (334)
++++| ...-.+..+.+|+..
T Consensus 158 ~l~igDs~~di~aA~~aG~~~ 178 (218)
T PRK11587 158 CVVVEDAPAGVLSGLAAGCHV 178 (218)
T ss_pred EEEEecchhhhHHHHHCCCEE
Confidence 44455 344566677788764
No 193
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=91.34 E-value=1.7 Score=36.40 Aligned_cols=86 Identities=23% Similarity=0.322 Sum_probs=53.2
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.+.|+.|++.|+++.++||+.... ...+..+|+.-..+.++.+. ......++..+... ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~----~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~~ 159 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH----AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKP-EE 159 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCc-ce
Confidence 567899999999999999999999854322 23334488764445555431 33334455555543 34
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ..-.+..+..|+..
T Consensus 160 ~~~vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 160 CLFVDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred EEEEcCCHHHHHHHHHcCCEE
Confidence 555553 33455566677653
No 194
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.26 E-value=0.33 Score=43.54 Aligned_cols=89 Identities=12% Similarity=0.106 Sum_probs=52.7
Q ss_pred CHHHHHHHHHhHHcCCCcEEEEecCCcccccc--cchhccccch-HHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCC
Q 019928 226 NYYKVQYGTLCIRENPGCLFIATNRDAVTHLT--DAQEWAGGGS-MVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQK 302 (334)
Q Consensus 226 ~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~--~~~~~~~~g~-~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~ 302 (334)
.|+...+++..|++......++||..... .. ......+... .++.+.. .... ....+..+++++|+.+
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~-~~~~~~L~~~gl~~~~~~~Ii~---s~~~-----~~~~l~~~~~~~~~~~ 95 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNI-FSLHKTLKSLGINADLPEMIIS---SGEI-----AVQMILESKKRFDIRN 95 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCCh-HHHHHHHHHCCCCccccceEEc---cHHH-----HHHHHHhhhhhccCCC
Confidence 46777888888887655677888965421 11 1111112111 1111111 1100 0245666778889999
Q ss_pred CcEEEEccCchhHHHHHHHcCC
Q 019928 303 SQICMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 303 ~evi~VGDs~~~DI~~a~~aG~ 324 (334)
+++++|||+. .|++.....|.
T Consensus 96 ~~~~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 96 GIIYLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred ceEEEeCCcc-cchhhhcCCCc
Confidence 9999999999 89887766664
No 195
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=91.22 E-value=0.28 Score=51.93 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=41.2
Q ss_pred CcEEEEecceeEEeCCe---------ecCCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 83 VETFIFDCDGVIWKGDK---------LIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~---------~~~~a~~aL~~L~~~-G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
-.+++||.||||..-.. ..++..+.|+.|.+. +-.++++| ||+.+.+.+.+...++
T Consensus 507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS---GR~~~~L~~~~~~~~l 572 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLS---RSGKDILDKNFGEYNI 572 (797)
T ss_pred CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEe---CCCHHHHHHHhCCCCC
Confidence 35899999999985321 233456788888765 56789999 8999999888865444
No 196
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=91.16 E-value=0.39 Score=40.28 Aligned_cols=22 Identities=14% Similarity=-0.129 Sum_probs=17.7
Q ss_pred cCCHHHHHHHHHHCCCeEEEEeC
Q 019928 101 IDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 101 ~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
.|++.+.|+.+.+. +.+++.||
T Consensus 60 rPgv~efL~~l~~~-yel~I~T~ 81 (156)
T TIGR02250 60 RPFLHEFLKEASKL-YEMHVYTM 81 (156)
T ss_pred CCCHHHHHHHHHhh-cEEEEEeC
Confidence 57888888888854 88888887
No 197
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=91.13 E-value=0.48 Score=45.67 Aligned_cols=75 Identities=21% Similarity=0.348 Sum_probs=44.9
Q ss_pred hcCcEEEEecceeEEeCCee------------cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHH---HHHHHHHcCCCCCc
Q 019928 81 DSVETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQ---YGKKFETLGLTVTE 145 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~------------~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~---~~~~l~~lGl~~~~ 145 (334)
...+.|++||||||+.++.+ ..++....-....+|+.+.++|..+---... +.+-+++-|..+..
T Consensus 373 ~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpd 452 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPD 452 (580)
T ss_pred CCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCC
Confidence 45789999999999986533 1223333444456899999998432222222 33334566666666
Q ss_pred CcEEecHHHH
Q 019928 146 EEIFASSFAA 155 (334)
Q Consensus 146 ~~i~~~~~~~ 155 (334)
..++.+....
T Consensus 453 gpviLspd~t 462 (580)
T COG5083 453 GPVILSPDRT 462 (580)
T ss_pred CCEeeccchh
Confidence 6666665433
No 198
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=90.84 E-value=1.8 Score=36.58 Aligned_cols=86 Identities=14% Similarity=0.208 Sum_probs=55.0
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH---------HHHHHHHhCCCCCCc
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDK 168 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~---------~~~~~l~~~~~~~~~ 168 (334)
.+++|++.+.|+.|++.|+++.++||.. . ....++.+|+....+.++++.. .....++..++.. +
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~-~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--N---APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSP-S 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--c---HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCH-H
Confidence 3578999999999999999999999832 2 2345788888755556655432 2233444555543 3
Q ss_pred EEEEEe-CcchHHHHHHcCCcc
Q 019928 169 KVYVVG-EDGILKELELAGFQY 189 (334)
Q Consensus 169 ~~~~~G-~~~~~~~l~~~G~~~ 189 (334)
.+.++| .....+..+..|++.
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEE
Confidence 344455 344556666777754
No 199
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.66 E-value=1.1 Score=39.09 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=42.1
Q ss_pred hcCcEEEEecceeEEeCC--------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 81 DSVETFIFDCDGVIWKGD--------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~--------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.|+++.|+|+||++.. -.-|...++|+.+.+ .+.+++-|. .+..-+...+..+|+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTA---a~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSA---TSMKWIEIKMTELGVL 84 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEec---CCHHHHHHHHHHhccc
Confidence 456899999999999863 225778899999888 688888884 2334444456777764
No 200
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=90.43 E-value=0.39 Score=51.39 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=41.5
Q ss_pred CcEEEEecceeEEeCC-------------e--ecCCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGD-------------K--LIDGVPETLDMLRSK-GKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~-------------~--~~~~a~~aL~~L~~~-G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
-.+++||.||||..-. . +.++..+.|+.|.+. +-.++++| ||+++.+.+.+...++.
T Consensus 591 ~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVS---GR~~~~Le~~fg~~~L~ 663 (934)
T PLN03064 591 NRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLS---GSDRSVLDENFGEFDMW 663 (934)
T ss_pred ceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEe---CCCHHHHHHHhCCCCce
Confidence 3589999999998621 1 123346788888765 56789999 89999999888665553
No 201
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=90.17 E-value=1.8 Score=41.76 Aligned_cols=88 Identities=16% Similarity=0.230 Sum_probs=60.4
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
.+++++.+.|+.|++.|++++++|| .++..+...++.+|+....+.++.+. ..+...++..++...+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee- 291 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER- 291 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc-
Confidence 3478899999999999999999997 34666667789999875445555443 2333455566654433
Q ss_pred EEEEeC-cchHHHHHHcCCccc
Q 019928 170 VYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
++++|. ..-.+..+.+|++.+
T Consensus 292 cl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 292 CIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred EEEEcCCHHHHHHHHHcCCEEE
Confidence 555554 455777788888764
No 202
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=89.92 E-value=3.4 Score=36.40 Aligned_cols=85 Identities=26% Similarity=0.357 Sum_probs=58.0
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEec---------HHHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~~ 170 (334)
++|++.++|..|++.|+++.++|| .+...+...++.+|+....+.++.. .......+...+.. ...+
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~-~~~~ 165 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLD-PEEA 165 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCC-hhhe
Confidence 588999999999999999999997 4556666677889998666666551 12222344445554 2457
Q ss_pred EEEeCc-chHHHHHHcCCc
Q 019928 171 YVVGED-GILKELELAGFQ 188 (334)
Q Consensus 171 ~~~G~~-~~~~~l~~~G~~ 188 (334)
+++|.. ......+.+|+.
T Consensus 166 l~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 166 LMVGDSLNDILAAKAAGVP 184 (220)
T ss_pred EEECCCHHHHHHHHHcCCC
Confidence 777753 345566677764
No 203
>PRK09449 dUMP phosphatase; Provisional
Probab=89.81 E-value=2.5 Score=37.04 Aligned_cols=88 Identities=20% Similarity=0.191 Sum_probs=58.6
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.+.|+.|+ .|+++.++||+ +.......++.+|+....+.++.+. ......++..+......
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 170 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNG---FTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSR 170 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCC---cHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCccc
Confidence 46899999999999 57999999984 2444455678888864445555443 23334555555433345
Q ss_pred EEEEeCcc--hHHHHHHcCCccc
Q 019928 170 VYVVGEDG--ILKELELAGFQYL 190 (334)
Q Consensus 170 ~~~~G~~~--~~~~l~~~G~~~~ 190 (334)
++++|... ..+..+..|++.+
T Consensus 171 ~~~vgD~~~~Di~~A~~aG~~~i 193 (224)
T PRK09449 171 VLMVGDNLHSDILGGINAGIDTC 193 (224)
T ss_pred EEEEcCCcHHHHHHHHHCCCcEE
Confidence 77777652 5677788898653
No 204
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.51 E-value=2.9 Score=36.49 Aligned_cols=88 Identities=22% Similarity=0.214 Sum_probs=56.2
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CCcCcEEecH---------HHHHHHHHhCCCCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT--VTEEEIFASS---------FAAAAYLKSIDFPKD 167 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~--~~~~~i~~~~---------~~~~~~l~~~~~~~~ 167 (334)
++++++.+.|+.|++.|+++.++||+ +...+...++.+|+. -..+.++++. ......++..+....
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 163 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDV 163 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCCh
Confidence 57888999999999999999999973 344555566777876 3334444442 223344555554312
Q ss_pred cEEEEEeC-cchHHHHHHcCCcc
Q 019928 168 KKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 168 ~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
+.++++|. ....+..+..|+..
T Consensus 164 ~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 164 QSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred hHeEEeCCCHHHHHHHHHCCCCe
Confidence 45666763 44566667778754
No 205
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=89.50 E-value=2.7 Score=42.70 Aligned_cols=101 Identities=23% Similarity=0.302 Sum_probs=65.0
Q ss_pred cCcEEEEecceeEEe----CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHH
Q 019928 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAA 157 (334)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~ 157 (334)
....+.++.||++.- .+++.|++.++++.|++.|+++.++|+ .+........+.+|++... ++. +.. -.+
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~~~~-~~~-p~~-K~~ 457 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGINVRA-EVL-PDD-KAA 457 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCcEEc-cCC-hHH-HHH
Confidence 456788999998854 567789999999999999999999995 4455555566889996211 111 111 111
Q ss_pred HHHhCCCCCCcEEEEEeC-cchHHHHHHcCCcc
Q 019928 158 YLKSIDFPKDKKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 158 ~l~~~~~~~~~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
.++.... .++.+.++|. ......++..|+.+
T Consensus 458 ~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 458 LIKELQE-KGRVVAMVGDGINDAPALAQADVGI 489 (562)
T ss_pred HHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEE
Confidence 2222111 2356777775 34567777777644
No 206
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=89.01 E-value=2.6 Score=37.36 Aligned_cols=87 Identities=20% Similarity=0.206 Sum_probs=55.1
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++|++.+.|+.|++.|+++.++||+. .......++.+|+....+.++... ......++..++.. +.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p-~~ 170 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAP-TD 170 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCCh-hh
Confidence 457888899999999999999999853 344445568888864333333322 22334455556543 34
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ....+..+..|++.
T Consensus 171 ~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 171 CVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred EEEeCCCHHHHHHHHHCCCcE
Confidence 566664 33456667788865
No 207
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=88.90 E-value=3.4 Score=35.30 Aligned_cols=88 Identities=19% Similarity=0.162 Sum_probs=51.9
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcC-c-------EEec-----------HHHHHHHH
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEE-E-------IFAS-----------SFAAAAYL 159 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~-~-------i~~~-----------~~~~~~~l 159 (334)
.++|++.+.|+.|++.|++++++||+ ....+...++.+|++.-.. . ...+ ......++
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~ 156 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGG---IMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLK 156 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCC---cHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHH
Confidence 45678889999999999999999973 3344445568888753111 1 1110 02333444
Q ss_pred HhCCCCCCcEEEEEeC-cchHHHHHHcCCccc
Q 019928 160 KSIDFPKDKKVYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 160 ~~~~~~~~~~~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
+..+... ..++++|. ......++..|+.+.
T Consensus 157 ~~~~~~~-~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 157 RELNPSL-TETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred HHhCCCH-HHEEEEcCCHhHHHHHHhcCCeEE
Confidence 4444432 33555663 345666777787654
No 208
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=88.62 E-value=2.8 Score=38.43 Aligned_cols=87 Identities=22% Similarity=0.252 Sum_probs=55.4
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEe------cHHHHHHHHHhCCCCCCcEEEE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA------SSFAAAAYLKSIDFPKDKKVYV 172 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~------~~~~~~~~l~~~~~~~~~~~~~ 172 (334)
+++|++.+.|+.|++.|+++.++||+ +...+...++.+|+....+.+++ ........++..+... ..+++
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p-~~~l~ 217 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGWQP-AAVMY 217 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCcCh-hHEEE
Confidence 44788999999999999999999973 45556666788888643333322 2233334444555543 34566
Q ss_pred EeC-cchHHHHHHcCCcc
Q 019928 173 VGE-DGILKELELAGFQY 189 (334)
Q Consensus 173 ~G~-~~~~~~l~~~G~~~ 189 (334)
+|. ....+..+.+|+..
T Consensus 218 IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 218 VGDETRDVEAARQVGLIA 235 (273)
T ss_pred ECCCHHHHHHHHHCCCeE
Confidence 664 33456667778754
No 209
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=88.50 E-value=3.5 Score=36.98 Aligned_cols=89 Identities=18% Similarity=0.131 Sum_probs=56.8
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC-cCcEEecH---------HHHHHHHHhCCCCCC
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT-EEEIFASS---------FAAAAYLKSIDFPKD 167 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~-~~~i~~~~---------~~~~~~l~~~~~~~~ 167 (334)
.+++|++.+.|+.|++.|+++.++||+ +...+...++.+|+.-. .+.++++. ......++..+...-
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~ 174 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDV 174 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCc
Confidence 456899999999999999999999973 44555556677777543 24444432 233344555554212
Q ss_pred cEEEEEeC-cchHHHHHHcCCcc
Q 019928 168 KKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 168 ~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
..++++|. ....+..+.+|+..
T Consensus 175 ~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 175 AACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred hheEEECCcHHHHHHHHHCCCeE
Confidence 34566664 34566667778764
No 210
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=88.37 E-value=1.8 Score=38.48 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=51.5
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc---CCCCCcCcEEe-------cHHHHHHHHHhCCCCCC
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL---GLTVTEEEIFA-------SSFAAAAYLKSIDFPKD 167 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~l---Gl~~~~~~i~~-------~~~~~~~~l~~~~~~~~ 167 (334)
..+++++.++|+.|+++|++++++||.+ .......++.. ++....+.++. ....+...++..+...
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s---~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p- 169 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGS---VPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPP- 169 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcCh-
Confidence 3578999999999999999999999843 22222223333 32211122221 1233344555666654
Q ss_pred cEEEEEeC-cchHHHHHHcCCcc
Q 019928 168 KKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 168 ~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
..++++|. ..-.+..+.+|+..
T Consensus 170 ~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 170 REILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEE
Confidence 33556664 44466677788865
No 211
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=88.06 E-value=14 Score=38.65 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=49.0
Q ss_pred ccEEEEEecCCCCHHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCccccc-CCCCHHHHH
Q 019928 214 VGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVV-GKPSTFMMD 292 (334)
Q Consensus 214 ~~~vv~~~~~~~~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~-gKP~~~~~~ 292 (334)
+-+++...|+..+ +..++...|++. |+..+.-.-|.. ..++.+....|.+.... -+|.- =.
T Consensus 528 ~~g~i~~~D~~R~--~a~~aI~~L~~~-Gi~~~mLTGDn~-------------~~A~~iA~~lGId~v~AellPed--K~ 589 (713)
T COG2217 528 LVGVIALADELRP--DAKEAIAALKAL-GIKVVMLTGDNR-------------RTAEAIAKELGIDEVRAELLPED--KA 589 (713)
T ss_pred EEEEEEEeCCCCh--hHHHHHHHHHHC-CCeEEEEcCCCH-------------HHHHHHHHHcChHhheccCCcHH--HH
Confidence 4445545555433 345667777764 554333332321 12455555555433222 22222 12
Q ss_pred HHHHHhCCCCCcEEEEccCchhHHHHHHHcCC
Q 019928 293 YLANKFGIQKSQICMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 293 ~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~ 324 (334)
...++|.-+-+.+.||||.. ||-.+..+|-+
T Consensus 590 ~~V~~l~~~g~~VamVGDGI-NDAPALA~AdV 620 (713)
T COG2217 590 EIVRELQAEGRKVAMVGDGI-NDAPALAAADV 620 (713)
T ss_pred HHHHHHHhcCCEEEEEeCCc-hhHHHHhhcCe
Confidence 33444433336899999999 99999888764
No 212
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=87.91 E-value=5.4 Score=41.43 Aligned_cols=56 Identities=20% Similarity=0.278 Sum_probs=41.1
Q ss_pred CcEEEEecceeEE----eCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 83 VETFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 83 ik~viFDiDGTL~----d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
...+.+-.|++++ =.+.+-|++.++++.|++.|+++.++| |-+.......-+++|+
T Consensus 426 ~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miT---GD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 426 GTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMIT---GDNRLTAAAIAAEAGV 485 (675)
T ss_pred CeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCC
Confidence 4556665565554 367788899999999999999999999 4555555544466666
No 213
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=87.82 E-value=2.3 Score=36.93 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=51.3
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCc
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (334)
..++|++.+.|+.|++.|+++.++||+....... ...+...++....+.++.+. ......+...++...+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~-~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSA-EEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchh-hhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 3568999999999999999999999965443211 11223344432233444332 2233444555554433
Q ss_pred EEEEEeC-cchHHHHHHcCCcc
Q 019928 169 KVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ..-....+..|++.
T Consensus 172 -~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 172 -CVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred -eEEEcCCHHHHHHHHHcCCEE
Confidence 444443 33456666778754
No 214
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=87.51 E-value=6.5 Score=34.23 Aligned_cols=86 Identities=22% Similarity=0.284 Sum_probs=55.3
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEec---------HHHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS---------SFAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~---------~~~~~~~l~~~~~~~~~~~ 170 (334)
++|++.++++.|++.|++++++||+ ........++.+|+....+.+++. .......++..+... +.+
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~-~~~ 169 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDP-EEM 169 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCCh-hhe
Confidence 5788899999999999999999973 334445666888886433444432 122334455555433 345
Q ss_pred EEEeC-cchHHHHHHcCCcc
Q 019928 171 YVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 171 ~~~G~-~~~~~~l~~~G~~~ 189 (334)
+++|. ....+..+..|+..
T Consensus 170 i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred EEECCCHHHHHHHHHCCCcE
Confidence 56664 44567777788754
No 215
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.46 E-value=2.1 Score=35.61 Aligned_cols=63 Identities=14% Similarity=0.294 Sum_probs=46.8
Q ss_pred hcCcEEEEecceeEEe--CCeecCCHHHHHHHHHHC-C-CeEEEEeCCCCCC----HHHHHHHH-HHcCCCC
Q 019928 81 DSVETFIFDCDGVIWK--GDKLIDGVPETLDMLRSK-G-KRLVFVTNNSTKS----RKQYGKKF-ETLGLTV 143 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d--~~~~~~~a~~aL~~L~~~-G-~~v~i~Tn~sgrs----~~~~~~~l-~~lGl~~ 143 (334)
.++|+++||-|.+|.- +.+.+|.-.+.++++++. | +.+.++||+.|-. ..+.++.| ++.|+++
T Consensus 41 ~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV 112 (190)
T KOG2961|consen 41 KGIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV 112 (190)
T ss_pred cCceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce
Confidence 3799999999999984 666777777778887754 4 6789999988873 23445555 5678875
No 216
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=87.34 E-value=4.4 Score=44.19 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=38.4
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
.+.+-+++.++++.++++|+++.++| |+++.......+++|+-.
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~~gi~~ 609 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVT---GDHPITAKAIAKGVGIIS 609 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCC
Confidence 45667889999999999999999999 889888888889999843
No 217
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=87.23 E-value=0.98 Score=45.72 Aligned_cols=41 Identities=27% Similarity=0.473 Sum_probs=31.8
Q ss_pred CcEEEEecceeEEeCCee------------cCCHHHHHHHHHHCCCeEEEEeC
Q 019928 83 VETFIFDCDGVIWKGDKL------------IDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~------------~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
-|.||-|+||||+.++.+ +.++.+...+..++|+++.++|.
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSA 582 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSA 582 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEeh
Confidence 568999999999986532 33445566777899999999994
No 218
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=87.13 E-value=9.8 Score=34.54 Aligned_cols=69 Identities=19% Similarity=0.304 Sum_probs=50.0
Q ss_pred CCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHhCCCCCCcEEEEEeCcchHHHHHHcCCc
Q 019928 115 GKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQ 188 (334)
Q Consensus 115 G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~ 188 (334)
-+.|+++|+|+..+-.-+.+-++.+|++++. .+++++.....|+...+.. .++...++..+.....|+.
T Consensus 36 ~VEVVllSRNspdTGlRv~nSI~hygL~ItR-~~ft~G~~~~~Yl~af~v~----LFLSan~~DV~~Ai~~G~~ 104 (264)
T PF06189_consen 36 LVEVVLLSRNSPDTGLRVFNSIRHYGLDITR-AAFTGGESPYPYLKAFNVD----LFLSANEDDVQEAIDAGIP 104 (264)
T ss_pred ceEEEEEecCCHHHHHHHHHhHHHhCCccee-eeecCCCCHHHHHHHhCCc----eEeeCCHHHHHHHHHcCCC
Confidence 3567899988766666667777899999864 6788888888899887643 4444555666666777874
No 219
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.38 E-value=32 Score=36.69 Aligned_cols=42 Identities=21% Similarity=0.257 Sum_probs=29.4
Q ss_pred ccccccccccccccCCC-----ccHHHHhhcCcEEEEecceeEEeCC
Q 019928 57 SRMESFVTKASASAQPL-----KNADELIDSVETFIFDCDGVIWKGD 98 (334)
Q Consensus 57 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~ik~viFDiDGTL~d~~ 98 (334)
+.+.+.++.+....+.. ....+.+.++|.|.||--|||+.+.
T Consensus 551 ATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~ 597 (951)
T KOG0207|consen 551 ATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGK 597 (951)
T ss_pred CCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecce
Confidence 44455555555444442 4455667999999999999999875
No 220
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=85.60 E-value=5.6 Score=36.35 Aligned_cols=86 Identities=20% Similarity=0.281 Sum_probs=53.7
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (334)
+++++.+.|+.|++.|++++++||+ +...+...++.+|+.-..+.++++. ..+...++..++.. ..+
T Consensus 102 ~~~g~~e~L~~Lk~~g~~l~ivTn~---~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~-~~~ 177 (272)
T PRK13223 102 VYPGVRDTLKWLKKQGVEMALITNK---PERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPP-SQS 177 (272)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECC---cHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCCh-hHE
Confidence 4678889999999999999999984 2334445567777753333333321 22334455556543 345
Q ss_pred EEEeC-cchHHHHHHcCCcc
Q 019928 171 YVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 171 ~~~G~-~~~~~~l~~~G~~~ 189 (334)
+++|. ....+..+..|++.
T Consensus 178 l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 178 LFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EEECCCHHHHHHHHHCCCeE
Confidence 55654 44567778888864
No 221
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.57 E-value=0.99 Score=44.24 Aligned_cols=49 Identities=24% Similarity=0.489 Sum_probs=35.4
Q ss_pred cCcEEEEecceeEEeCC---------ee--------cCCHHHHHHHHHHCCCeEEEEeCCCCCCHH
Q 019928 82 SVETFIFDCDGVIWKGD---------KL--------IDGVPETLDMLRSKGKRLVFVTNNSTKSRK 130 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~---------~~--------~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~ 130 (334)
..|+.++|+|+|||-+- ++ +-...+.+..|+..|+-++++|.|.-+...
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~ 286 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAK 286 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHH
Confidence 57899999999999731 22 222346788899999999999976544333
No 222
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=84.49 E-value=6.6 Score=34.11 Aligned_cols=87 Identities=29% Similarity=0.381 Sum_probs=59.6
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhC-CCCCC
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSI-DFPKD 167 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~-~~~~~ 167 (334)
.+++|++.+.|+.|++. +++.++||+ +...+...++.+|+....+.++.+. ......++.. ++..
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~---~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~- 170 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNG---VRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSK- 170 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCC---chHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCc-
Confidence 46789999999999999 999999984 2445556678899875555665543 2334445555 5543
Q ss_pred cEEEEEeCc--chHHHHHHcCCcc
Q 019928 168 KKVYVVGED--GILKELELAGFQY 189 (334)
Q Consensus 168 ~~~~~~G~~--~~~~~l~~~G~~~ 189 (334)
..++++|.. ......+..|++.
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcE
Confidence 346777754 3566777888865
No 223
>PLN02940 riboflavin kinase
Probab=84.36 E-value=6.3 Score=38.01 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=56.5
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH-HcCCCCCcCcEEecHH---------HHHHHHHhCCCCCCcE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFE-TLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDKK 169 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~-~lGl~~~~~~i~~~~~---------~~~~~l~~~~~~~~~~ 169 (334)
++|++.+.|+.|++.|+++.++||+ +...+...+. ..|+....+.++++.. .....++..++... .
T Consensus 94 l~pGv~elL~~Lk~~g~~l~IvTn~---~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~-~ 169 (382)
T PLN02940 94 ALPGANRLIKHLKSHGVPMALASNS---PRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS-N 169 (382)
T ss_pred CCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh-H
Confidence 4688889999999999999999984 3444455565 6777544455555432 33344555666543 3
Q ss_pred EEEEeC-cchHHHHHHcCCccc
Q 019928 170 VYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
++++|. ....+..+.+|+..+
T Consensus 170 ~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 170 CLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred EEEEeCCHHHHHHHHHcCCEEE
Confidence 555553 445666778888754
No 224
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=84.31 E-value=9.4 Score=34.57 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=53.2
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC-cCcEEecH---------HHHHHHHHhCCCCCCc
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT-EEEIFASS---------FAAAAYLKSIDFPKDK 168 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~-~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (334)
.++|++.+.|+.|++.|+++.++||+ +...+...++.+|+.-. .+.++++. ......++..+...-.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~---~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 177 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGY---TREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVA 177 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCC---cHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 45889999999999999999999973 33444445565554321 23343332 2333445555653223
Q ss_pred EEEEEeC-cchHHHHHHcCCcc
Q 019928 169 KVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
.++++|. ....+..+..|+..
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEE
Confidence 4556653 44566667778764
No 225
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=83.82 E-value=8.6 Score=41.60 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=35.4
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCc
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE 145 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~ 145 (334)
.+++-+++.++++.+++.|+++.++| |-++......-+++|+....
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiT---GD~~~TA~aIa~~~Gi~~~~ 590 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMIT---GDHVETAIAIAKECGIEAEA 590 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEEC---CCCHHHHHHHHHHcCCCCCC
Confidence 46677889999999999999999999 55555555555778865543
No 226
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=82.56 E-value=5.4 Score=34.35 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=49.7
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCcCcEEecH---------HHHHHHHHhCCCCCCc
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFET-LGLTVTEEEIFASS---------FAAAAYLKSIDFPKDK 168 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~-lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~ 168 (334)
.++|++.+.|+.|++.|++++++||+.... ....+.. .++....+.++++. ......++..+....+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~---~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH---TTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh---HHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhH
Confidence 368889999999999999999999954222 1111221 23322223444432 2333445566654433
Q ss_pred EEEEEeC-cchHHHHHHcCCcc
Q 019928 169 KVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++++|. ..-....+..|++.
T Consensus 161 -~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 161 -AVFFDDNADNIEAANALGITS 181 (199)
T ss_pred -eEEeCCCHHHHHHHHHcCCEE
Confidence 444443 33456667778754
No 227
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=82.25 E-value=11 Score=40.99 Aligned_cols=50 Identities=22% Similarity=0.212 Sum_probs=38.6
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~ 144 (334)
|.+.=.+.+-+++.++++.|++.|+++.++| |-++......-+++|+...
T Consensus 572 Gli~~~Dplr~~~~~aI~~l~~aGI~v~miT---GD~~~tA~~iA~~~GI~~~ 621 (941)
T TIGR01517 572 GVVGIKDPLRPGVREAVQECQRAGITVRMVT---GDNIDTAKAIARNCGILTF 621 (941)
T ss_pred EEeeccCCCchhHHHHHHHHHHCCCEEEEEC---CCChHHHHHHHHHcCCCCC
Confidence 4444467778899999999999999999999 5555555555588888643
No 228
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=81.51 E-value=2.2 Score=37.02 Aligned_cols=52 Identities=31% Similarity=0.379 Sum_probs=34.8
Q ss_pred EEEEecceeEEeCCee-cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 85 TFIFDCDGVIWKGDKL-IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 85 ~viFDiDGTL~d~~~~-~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
.++||.||||+-.... .|+..+.|+.|+.. +.+.++-. .++.+..+++|.++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vgg------sDl~k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVGG------SDLSKQQEQLGDNV 65 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEeec------HHHHHHHHHhchhH
Confidence 7999999999975544 45566788887654 55555542 35555566777664
No 229
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=81.29 E-value=1.6 Score=36.94 Aligned_cols=13 Identities=46% Similarity=0.800 Sum_probs=12.0
Q ss_pred EEEecceeEEeCC
Q 019928 86 FIFDCDGVIWKGD 98 (334)
Q Consensus 86 viFDiDGTL~d~~ 98 (334)
++||+||||++++
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999887
No 230
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=81.01 E-value=9.2 Score=30.80 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=34.7
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
.+++...-|..|+++|+...++++ +..++-..+.|+.+.+..
T Consensus 45 fY~Di~rIL~dLk~~GVtl~~ASR--t~ap~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 45 FYDDIRRILVDLKKLGVTLIHASR--TMAPQIASQGLETFKVKQ 86 (144)
T ss_pred eccchhHHHHHHHhcCcEEEEecC--CCCHHHHHHHHHHhccCc
Confidence 477888899999999999999998 667777777788877754
No 231
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=80.86 E-value=18 Score=39.86 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=35.3
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.+-+++.++++.+++.|+++.++| |.++......-+++|+.
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiT---GD~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLT---GDFPETAKAIAQEVGII 686 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHcCCC
Confidence 45667889999999999999999999 66666666666888884
No 232
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=80.64 E-value=14 Score=39.96 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=36.9
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
|.+.=.+.+-+++.++++.+++.|+++.++| |-++......-+++|+.
T Consensus 543 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLT---GDNPIVTAKICREVGLE 590 (903)
T ss_pred EEEeccCccHHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCC
Confidence 3333366778889999999999999999999 55555555555888884
No 233
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=80.41 E-value=4.7 Score=37.68 Aligned_cols=59 Identities=17% Similarity=0.188 Sum_probs=43.9
Q ss_pred EEEEecceeEEeC-------------------CeecCCHHHHHHHHHHCC-CeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 85 TFIFDCDGVIWKG-------------------DKLIDGVPETLDMLRSKG-KRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 85 ~viFDiDGTL~d~-------------------~~~~~~a~~aL~~L~~~G-~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
++|-|||.|+..+ .+.+|++....+.|...| .+++++||..=-.-.-+.+++..-+++.
T Consensus 163 giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~ 241 (373)
T COG4850 163 GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY 241 (373)
T ss_pred eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC
Confidence 6999999999873 366899999999999888 8999999832222234455556666664
No 234
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=80.34 E-value=1.9 Score=42.55 Aligned_cols=40 Identities=25% Similarity=0.423 Sum_probs=32.5
Q ss_pred HHHHHHHhCCCCCcEEEEccCchhHHHHHHHc-CCcEEEEc
Q 019928 291 MDYLANKFGIQKSQICMVGDRLDTDILFGQNG-GCKTLLVL 330 (334)
Q Consensus 291 ~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~a-G~~tv~V~ 330 (334)
.....+.+|+.-++|++|||.+..||.-.+.. |++|++|.
T Consensus 284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 46778888999999999999999999988887 99999984
No 235
>PLN02811 hydrolase
Probab=80.34 E-value=9.8 Score=33.32 Aligned_cols=89 Identities=16% Similarity=0.183 Sum_probs=50.3
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCcCcEEecH-----------HHHHHHHHhCC-
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTVTEEEIFASS-----------FAAAAYLKSID- 163 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~~~~~i~~~~-----------~~~~~~l~~~~- 163 (334)
...++|++.+.|+.|++.|+++.++||.... .+...+ +..++.-..+.++++. ......+...+
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~---~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~ 152 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKR---HFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFED 152 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchh---hHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCC
Confidence 3457899999999999999999999984322 222222 2223322122333322 22333444443
Q ss_pred --CCCCcEEEEEeC-cchHHHHHHcCCcc
Q 019928 164 --FPKDKKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 164 --~~~~~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
+.. +.++++|. ....+..+..|++.
T Consensus 153 ~~~~~-~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 153 GPVDP-GKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred CCCCc-cceEEEeccHhhHHHHHHCCCeE
Confidence 432 33555553 44566777788865
No 236
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=80.28 E-value=13 Score=39.37 Aligned_cols=48 Identities=23% Similarity=0.185 Sum_probs=37.7
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
|.+.=.+.+-+++.++++.|++.|+++.++| |-++......-+++|+.
T Consensus 435 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 435 GLLPLFDPPRHDTKETIERARHLGVEVKMVT---GDHLAIAKETARRLGLG 482 (755)
T ss_pred EEeeccCCChhhHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCC
Confidence 3334467778899999999999999999999 56666655555888884
No 237
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=80.16 E-value=9.2 Score=41.30 Aligned_cols=43 Identities=21% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.+-+++.++++.|++.|+++.++| |-++......-+++|++
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miT---GD~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILT---GDSELVAAKVCHEVGLD 590 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 56677889999999999999999999 55666555555888884
No 238
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=79.60 E-value=16 Score=31.34 Aligned_cols=49 Identities=22% Similarity=0.123 Sum_probs=36.7
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEec
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFAS 151 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~ 151 (334)
..+.+.+.|+.|++.|+++.++||+ +...+...++.+|+....+.++++
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~---~~~~~~~~l~~~gl~~~f~~~~~~ 155 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGR---PRKDAAKFLTTHGLEILFPVQIWM 155 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCC---CHHHHHHHHHHcCchhhCCEEEee
Confidence 4555789999999999999999973 455666678999987544444443
No 239
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=79.38 E-value=20 Score=38.56 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=36.9
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
|.+.=.+.+-+++.++++.+++.|+++.++| |-++......-+++|+.
T Consensus 508 Gli~l~Dp~R~~~~~aI~~l~~aGI~vvmiT---GD~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLT---GDNEIVTARICQEVGID 555 (867)
T ss_pred EEEEeeCCCchhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCC
Confidence 4444467778889999999999999999999 55555555555888884
No 240
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=78.68 E-value=15 Score=31.89 Aligned_cols=85 Identities=22% Similarity=0.248 Sum_probs=55.7
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHH---------HHHHHHhCCCCCCcEE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPKDKKV 170 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~---------~~~~l~~~~~~~~~~~ 170 (334)
.++++.+.|+.++.. +++.++||. ......+.++.+|+....+.++++... ....++..++.. +.+
T Consensus 100 ~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p-~~~ 174 (229)
T COG1011 100 DYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPP-EEA 174 (229)
T ss_pred cChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCc-ceE
Confidence 356667778888877 889999994 344556667999987777788877643 223455555542 456
Q ss_pred EEEeCcc--hHHHHHHcCCcc
Q 019928 171 YVVGEDG--ILKELELAGFQY 189 (334)
Q Consensus 171 ~~~G~~~--~~~~l~~~G~~~ 189 (334)
+++|... ...-.+..|.+.
T Consensus 175 l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 175 LFVGDSLENDILGARALGMKT 195 (229)
T ss_pred EEECCChhhhhHHHHhcCcEE
Confidence 7777532 335566777753
No 241
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=78.57 E-value=4.3 Score=36.78 Aligned_cols=60 Identities=23% Similarity=0.434 Sum_probs=41.0
Q ss_pred EEEEecceeEEeCC--eec---------------------CC----HHHHHHHHHHC------CCeEEEEeCCCCCCHHH
Q 019928 85 TFIFDCDGVIWKGD--KLI---------------------DG----VPETLDMLRSK------GKRLVFVTNNSTKSRKQ 131 (334)
Q Consensus 85 ~viFDiDGTL~d~~--~~~---------------------~~----a~~aL~~L~~~------G~~v~i~Tn~sgrs~~~ 131 (334)
-|.||-|+||.+.+ +++ ++ ....|.+|++. -++++++|-.++.+.+-
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 37899999999742 111 11 11345555543 35679999877777777
Q ss_pred HHHHHHHcCCCCC
Q 019928 132 YGKKFETLGLTVT 144 (334)
Q Consensus 132 ~~~~l~~lGl~~~ 144 (334)
+.+.|+..|+.++
T Consensus 203 vI~TLr~Wgv~vD 215 (264)
T PF06189_consen 203 VIRTLRSWGVRVD 215 (264)
T ss_pred HHHHHHHcCCcHh
Confidence 8888899999875
No 242
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=78.13 E-value=11 Score=32.38 Aligned_cols=38 Identities=18% Similarity=0.404 Sum_probs=25.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCC
Q 019928 104 VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (334)
Q Consensus 104 a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl 141 (334)
|.+.|..-+..|-.++|+|..+..-.+.+.+.| +.+.+
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 456677778899999999954433345556666 44555
No 243
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=78.13 E-value=36 Score=37.54 Aligned_cols=48 Identities=29% Similarity=0.342 Sum_probs=36.4
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
|.+.-.+++-+++.++++.|++.|+++.++| |-..+.....-++.|+-
T Consensus 624 G~~gieD~lq~~v~etI~~L~~AGIkv~mlT---GD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 624 GATAIEDKLQEGVPETIELLRQAGIKIWVLT---GDKVETAINIGYSCRLL 671 (1057)
T ss_pred EEEEEhhhhhhccHHHHHHHHHCCCeEEEEc---CCcHHHHHHHHHHhCCC
Confidence 4444467788889999999999999999999 44555555555677773
No 244
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=77.92 E-value=15 Score=32.36 Aligned_cols=92 Identities=21% Similarity=0.259 Sum_probs=59.8
Q ss_pred eCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHH---------HHHHHHhCCCCC
Q 019928 96 KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA---------AAAYLKSIDFPK 166 (334)
Q Consensus 96 d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~---------~~~~l~~~~~~~ 166 (334)
++.+.+|++.+.|..|+++|++++.+|+ .++..+...++.+|+....+.++++.+. +....+..++..
T Consensus 83 ~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 83 EGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred cCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 3457799999999999999999999996 2344566667889987655565554422 223344444544
Q ss_pred CcEEEEEeCcchHHHHHHcCCccc
Q 019928 167 DKKVYVVGEDGILKELELAGFQYL 190 (334)
Q Consensus 167 ~~~~~~~G~~~~~~~l~~~G~~~~ 190 (334)
.+.+.+..+..=.+..+.+|....
T Consensus 160 ~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 160 EECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHeEEEecchhHHHHHHHCCCEEE
Confidence 444444444444566667777653
No 245
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=77.73 E-value=13 Score=33.31 Aligned_cols=115 Identities=16% Similarity=0.246 Sum_probs=69.0
Q ss_pred cCCCccHHHHhhcC-c-EEEEecceeEEeCCee---------------------------------cCC--HHHHHHHHH
Q 019928 70 AQPLKNADELIDSV-E-TFIFDCDGVIWKGDKL---------------------------------IDG--VPETLDMLR 112 (334)
Q Consensus 70 ~~~~~~~~~~~~~i-k-~viFDiDGTL~d~~~~---------------------------------~~~--a~~aL~~L~ 112 (334)
|-..+.+.+-+..- + +|+|||||||+|+... .+. +.+.|+.++
T Consensus 48 ~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~ 127 (237)
T TIGR01672 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 33344454444443 3 9999999999996531 222 678899999
Q ss_pred HCCCeEEEEeCCCCCCHHHHHHH-HHHcCCCCCcCcEEecHH------HHHHHHHhCCCCCCcEEEEEeC-cchHHHHHH
Q 019928 113 SKGKRLVFVTNNSTKSRKQYGKK-FETLGLTVTEEEIFASSF------AAAAYLKSIDFPKDKKVYVVGE-DGILKELEL 184 (334)
Q Consensus 113 ~~G~~v~i~Tn~sgrs~~~~~~~-l~~lGl~~~~~~i~~~~~------~~~~~l~~~~~~~~~~~~~~G~-~~~~~~l~~ 184 (334)
++|++++++||.....++...+. ++.+|++...+.++.... ....++.+.++ .+++|. .......+.
T Consensus 128 ~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~i-----~i~vGDs~~DI~aAk~ 202 (237)
T TIGR01672 128 RRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKNI-----RIHYGDSDNDITAAKE 202 (237)
T ss_pred HCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCCC-----eEEEeCCHHHHHHHHH
Confidence 99999999998543324444444 467999743333333211 01134444332 455664 334566677
Q ss_pred cCCcc
Q 019928 185 AGFQY 189 (334)
Q Consensus 185 ~G~~~ 189 (334)
+|++.
T Consensus 203 AGi~~ 207 (237)
T TIGR01672 203 AGARG 207 (237)
T ss_pred CCCCE
Confidence 88764
No 246
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=77.28 E-value=9.7 Score=38.49 Aligned_cols=100 Identities=19% Similarity=0.231 Sum_probs=63.1
Q ss_pred cEEEEecceeEEe----CCeecCCHHHHHHHHHHCCC-eEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHH
Q 019928 84 ETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGK-RLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAY 158 (334)
Q Consensus 84 k~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G~-~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~ 158 (334)
..+.+-.||++.. .+.+.+++.++|+.|++.|+ ++.++|| .+.......++.+|++.....+.... -.+.
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~p~~--K~~~ 417 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELLPED--KLEI 417 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccCcHH--HHHH
Confidence 4466667776643 56778999999999999999 9999995 45556666678999963222222111 1122
Q ss_pred HHhCCCCCCcEEEEEeCc-chHHHHHHcCCcc
Q 019928 159 LKSIDFPKDKKVYVVGED-GILKELELAGFQY 189 (334)
Q Consensus 159 l~~~~~~~~~~~~~~G~~-~~~~~l~~~G~~~ 189 (334)
++.... ....+.++|.. .....++.+|+-+
T Consensus 418 i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 418 VKELRE-KYGPVAMVGDGINDAPALAAADVGI 448 (536)
T ss_pred HHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEE
Confidence 222211 12457777753 4566777777644
No 247
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=77.02 E-value=4 Score=36.12 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=11.9
Q ss_pred EEEEecceeEEeC
Q 019928 85 TFIFDCDGVIWKG 97 (334)
Q Consensus 85 ~viFDiDGTL~d~ 97 (334)
++.||+|-||+|.
T Consensus 15 l~~FDFD~TIid~ 27 (256)
T KOG3120|consen 15 LLVFDFDRTIIDQ 27 (256)
T ss_pred EEEEecCceeecC
Confidence 7999999999984
No 248
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=75.95 E-value=18 Score=39.86 Aligned_cols=87 Identities=16% Similarity=0.241 Sum_probs=55.4
Q ss_pred cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC-CCcCcEEecH---------HHHHHHHHhCCCCCCcEE
Q 019928 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT-VTEEEIFASS---------FAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 101 ~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~-~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~ 170 (334)
+|++.+.|+.|++.|+++.++||. ....+...++.+|+. ...+.++.+. ......++..++...+ +
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~---~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e-~ 238 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSA---DRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSE-C 238 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCC---cHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCccc-E
Confidence 567778889999999999999983 444555667888885 3334554442 2333445556654434 4
Q ss_pred EEEe-CcchHHHHHHcCCcccC
Q 019928 171 YVVG-EDGILKELELAGFQYLG 191 (334)
Q Consensus 171 ~~~G-~~~~~~~l~~~G~~~~~ 191 (334)
+++| .....+..+..|+..+.
T Consensus 239 v~IgDs~~Di~AA~~aGm~~I~ 260 (1057)
T PLN02919 239 VVIEDALAGVQAARAAGMRCIA 260 (1057)
T ss_pred EEEcCCHHHHHHHHHcCCEEEE
Confidence 4454 34456677778876543
No 249
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=75.84 E-value=12 Score=34.48 Aligned_cols=87 Identities=18% Similarity=0.196 Sum_probs=50.0
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC-CCCCc-CcEEec---------HHHHHHHHHhCCCCCCc
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG-LTVTE-EEIFAS---------SFAAAAYLKSIDFPKDK 168 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lG-l~~~~-~~i~~~---------~~~~~~~l~~~~~~~~~ 168 (334)
++|++.+.|+.|++.|++++++||. +...+...++.++ ..... -.++.+ .......+...++.. .
T Consensus 145 l~pGv~elL~~L~~~g~~l~IvTn~---~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p-~ 220 (286)
T PLN02779 145 LRPGVLRLMDEALAAGIKVAVCSTS---NEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDP-S 220 (286)
T ss_pred chhhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcCh-H
Confidence 3567788999999999999999984 3344444444442 11111 112211 123334455556543 3
Q ss_pred EEEEEeC-cchHHHHHHcCCccc
Q 019928 169 KVYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
.++++|. ....+..+..|+..+
T Consensus 221 ~~l~IGDs~~Di~aA~~aG~~~i 243 (286)
T PLN02779 221 RCVVVEDSVIGLQAAKAAGMRCI 243 (286)
T ss_pred HEEEEeCCHHhHHHHHHcCCEEE
Confidence 4555663 445677778888654
No 250
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=75.61 E-value=2.5 Score=36.13 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=23.5
Q ss_pred cEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 304 QICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 304 evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
--|+-||+- +||-+|+++|.+.|.|+
T Consensus 186 ~~IhYGDSD-~Di~AAkeaG~RgIRil 211 (237)
T COG3700 186 IRIHYGDSD-NDITAAKEAGARGIRIL 211 (237)
T ss_pred ceEEecCCc-hhhhHHHhcCccceeEE
Confidence 358999999 99999999999998875
No 251
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=75.20 E-value=13 Score=38.98 Aligned_cols=97 Identities=21% Similarity=0.311 Sum_probs=61.7
Q ss_pred EEEEecceeEEe----CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH-HHHHHH
Q 019928 85 TFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF-AAAAYL 159 (334)
Q Consensus 85 ~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~-~~~~~l 159 (334)
.+++-.||.+.- .+++-+++.+++++|++.|+++.++| |-++......-+++|++--..++..... ...+.+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLT---GDn~~~A~~iA~~lGId~v~AellPedK~~~V~~l 595 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLT---GDNRRTAEAIAKELGIDEVRAELLPEDKAEIVREL 595 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcChHhheccCCcHHHHHHHHHH
Confidence 699999996643 77888999999999999999999999 4555555555588998532222222111 122333
Q ss_pred HhCCCCCCcEEEEEeCc-chHHHHHHcCCc
Q 019928 160 KSIDFPKDKKVYVVGED-GILKELELAGFQ 188 (334)
Q Consensus 160 ~~~~~~~~~~~~~~G~~-~~~~~l~~~G~~ 188 (334)
++ .++++.++|.- .....|..+.+-
T Consensus 596 ~~----~g~~VamVGDGINDAPALA~AdVG 621 (713)
T COG2217 596 QA----EGRKVAMVGDGINDAPALAAADVG 621 (713)
T ss_pred Hh----cCCEEEEEeCCchhHHHHhhcCee
Confidence 33 23567777642 234555665443
No 252
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=74.17 E-value=1.4 Score=43.95 Aligned_cols=20 Identities=20% Similarity=0.215 Sum_probs=15.9
Q ss_pred CcEEEEecceeEEeCCeecC
Q 019928 83 VETFIFDCDGVIWKGDKLID 102 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~ 102 (334)
-+.++||+||||+.++..++
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~ 41 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFP 41 (497)
T ss_pred ccEEEEecCCcccCCCCccH
Confidence 45799999999998765544
No 253
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=73.53 E-value=13 Score=30.35 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=37.6
Q ss_pred EEEEecceeEEeC--CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCC
Q 019928 85 TFIFDCDGVIWKG--DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (334)
Q Consensus 85 ~viFDiDGTL~d~--~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl 141 (334)
..++|+||.|++- .+-+ .-.+.++.+.+.|.++.++|.-+.. .+..+++ ..++-
T Consensus 45 iAildL~G~~l~l~S~R~~-~~~evi~~I~~~G~PviVAtDV~p~--P~~V~Kia~~f~A 101 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRNM-SRSEVIEWISEYGKPVIVATDVSPP--PETVKKIARSFNA 101 (138)
T ss_pred EEEEecCCcEEEEEeecCC-CHHHHHHHHHHcCCEEEEEecCCCC--cHHHHHHHHHhCC
Confidence 6789999999873 3322 2567899999999999999975433 3444444 44444
No 254
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=73.46 E-value=37 Score=27.44 Aligned_cols=27 Identities=30% Similarity=0.506 Sum_probs=23.3
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNS 125 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~s 125 (334)
..++++.+.|+.|++.|+++.++||+.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~ 90 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGS 90 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCc
Confidence 346789999999999999999999854
No 255
>PLN02954 phosphoserine phosphatase
Probab=72.66 E-value=8.2 Score=33.70 Aligned_cols=65 Identities=26% Similarity=0.467 Sum_probs=51.6
Q ss_pred cHHHHhhcCcEEEEecceeEEeCC--------------------------------------------------------
Q 019928 75 NADELIDSVETFIFDCDGVIWKGD-------------------------------------------------------- 98 (334)
Q Consensus 75 ~~~~~~~~ik~viFDiDGTL~d~~-------------------------------------------------------- 98 (334)
...+++..+|+|+||+||||+|++
T Consensus 4 ~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (224)
T PLN02954 4 DVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPP 83 (224)
T ss_pred HHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccC
Confidence 345677889999999999999851
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+++|++.+.|+.|++.|++++++|++ ....+...++.+|++
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGG---FRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHhCCC
Confidence 34688899999999999999999962 344455556888885
No 256
>PLN03190 aminophospholipid translocase; Provisional
Probab=72.37 E-value=82 Score=35.27 Aligned_cols=47 Identities=28% Similarity=0.311 Sum_probs=35.1
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
|.+.-.+++-+++.++++.|++.|+++.++| |-........-.+.|+
T Consensus 719 G~~~~~D~lr~~v~~~I~~l~~agi~v~mlT---GD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 719 GASAIEDKLQQGVPEAIESLRTAGIKVWVLT---GDKQETAISIGYSSKL 765 (1178)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEC---CCCHHHHHHHHHHhCC
Confidence 4444467778889999999999999999999 4455554444466666
No 257
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=71.86 E-value=51 Score=36.34 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=41.1
Q ss_pred eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Q 019928 92 GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (334)
Q Consensus 92 GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~ 144 (334)
|-+.=.+++-+++.++++.|++.|+++.++| |.++......-+++|+-..
T Consensus 649 Gli~~~d~lr~~~~~~I~~l~~agi~v~miT---GD~~~TA~~iA~~~gii~~ 698 (1054)
T TIGR01657 649 GFIVFENPLKPDTKEVIKELKRASIRTVMIT---GDNPLTAVHVARECGIVNP 698 (1054)
T ss_pred EEEEEecCCCccHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCCCC
Confidence 5555567788999999999999999999999 6777777777788999543
No 258
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=71.82 E-value=4.9 Score=31.27 Aligned_cols=64 Identities=28% Similarity=0.492 Sum_probs=45.6
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CCcCcEEec
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT--VTEEEIFAS 151 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~--~~~~~i~~~ 151 (334)
++.+++||.++-.-....+..-.+..+.++..|+.+.++. ....+.+.|...|+. +..+.++.+
T Consensus 48 ~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~~~~l~~-----~~~~v~~~l~~~~~~~~~~~~~~~~s 113 (117)
T PF01740_consen 48 IKNVILDMSGVSFIDSSGIQALVDIIKELRRRGVQLVLVG-----LNPDVRRILERSGLIDFIPEDQIFPS 113 (117)
T ss_dssp SSEEEEEETTESEESHHHHHHHHHHHHHHHHTTCEEEEES-----HHHHHHHHHHHTTGHHHSCGGEEESS
T ss_pred ceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCCEEEEEE-----CCHHHHHHHHHcCCChhcCCCCccCC
Confidence 6899999999875433333333567788889999998887 577888888988885 333444443
No 259
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=69.13 E-value=20 Score=30.15 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=50.3
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH-------------HHHHHHHHhCCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS-------------FAAAAYLKSIDFP 165 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~-------------~~~~~~l~~~~~~ 165 (334)
++++++.+.|+.|+ .++.++||+ +.......++.+|+....+.++++. ......++..+..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 35677788888876 478999984 3455666778888864445555432 2233445555554
Q ss_pred CCcEEEEEeC-cchHHHHHHcCCcc
Q 019928 166 KDKKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 166 ~~~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
. ..++++|. ..-.+..+..|++.
T Consensus 158 ~-~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 158 P-ERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred c-cceEEEeCCHHHHHHHHHcCCEE
Confidence 3 33455554 33455666677653
No 260
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=69.08 E-value=26 Score=29.41 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=53.6
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHH---------HHHHHHHhCCCCCCc
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSF---------AAAAYLKSIDFPKDK 168 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~---------~~~~~l~~~~~~~~~ 168 (334)
..++| ..+.|..|++. ++++++||+ +...+...++.+|+.-..+.++++.. .....++..+.....
T Consensus 87 ~~~~~-~~e~L~~L~~~-~~l~I~T~~---~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 161 (188)
T PRK10725 87 VEPLP-LIEVVKAWHGR-RPMAVGTGS---ESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQ 161 (188)
T ss_pred CCCcc-HHHHHHHHHhC-CCEEEEcCC---chHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHH
Confidence 34566 56888888765 899999972 34555666788998654556665542 233445555554333
Q ss_pred EEEEEeC-cchHHHHHHcCCccc
Q 019928 169 KVYVVGE-DGILKELELAGFQYL 190 (334)
Q Consensus 169 ~~~~~G~-~~~~~~l~~~G~~~~ 190 (334)
++++|. ....+..+.+|++.+
T Consensus 162 -~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 162 -CVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred -eEEEeccHhhHHHHHHCCCEEE
Confidence 444453 445667777887653
No 261
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=68.09 E-value=32 Score=32.35 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=50.8
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH-HHHcCCCCCc-------CcEE------------ecHHHHHHH
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKK-FETLGLTVTE-------EEIF------------ASSFAAAAY 158 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~-l~~lGl~~~~-------~~i~------------~~~~~~~~~ 158 (334)
++.|++.+.++.|++.|+++.++|+... .+.+. ++.+|++... +..+ .......++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~----~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFT----YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcc----hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 4467788899999999999999997332 22333 3667875211 1111 122334455
Q ss_pred HHhCCCCCCcEEEEEeC-cchHHHHHHcCCcc
Q 019928 159 LKSIDFPKDKKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 159 l~~~~~~~~~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
++..++.... +..+|. .....-++.+|+.+
T Consensus 257 a~~lgi~~~q-tIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 257 AQEYEIPLAQ-TVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred HHHcCCChhh-EEEEECCHHHHHHHHHCCCeE
Confidence 5666664433 444553 44566677778755
No 262
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=67.71 E-value=3.1 Score=40.66 Aligned_cols=45 Identities=22% Similarity=0.187 Sum_probs=42.0
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEE
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv 327 (334)
..|-+...|..++..-++++...+++||+...|+.++++.|+.|.
T Consensus 155 l~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 155 LKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred hhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 378899999999999999999999999999999999999998774
No 263
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=66.19 E-value=16 Score=27.84 Aligned_cols=56 Identities=13% Similarity=0.268 Sum_probs=41.2
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+.+.+++|+-|+=+-+...+..-....+.+++.|..+.++. ....+.+.|+..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~ 93 (106)
T TIGR02886 38 PIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGGEVIVCN-----VSPAVKRLFELSGLF 93 (106)
T ss_pred CCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCCEEEEEe-----CCHHHHHHHHHhCCc
Confidence 46899999999876333332223466788899999998777 567788888888875
No 264
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=66.06 E-value=15 Score=30.73 Aligned_cols=49 Identities=14% Similarity=0.261 Sum_probs=34.7
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEE
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIF 149 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~ 149 (334)
.++++++.+.++.|++.|+++.++||. ....+...++.+|+....+.++
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~i~ 119 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDG---NDFFIDPVLEGIGEKDVFIEIY 119 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCC---cHHHHHHHHHHcCChhheeEEe
Confidence 356788889999999999999999973 3344455567777754333444
No 265
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=66.00 E-value=19 Score=38.06 Aligned_cols=100 Identities=11% Similarity=0.137 Sum_probs=63.6
Q ss_pred cCcEEEEecceeEEe----CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHH
Q 019928 82 SVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAA 157 (334)
Q Consensus 82 ~ik~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~ 157 (334)
....+.|=.||++.- .+++.+++.++++.|++.|+++.++| |.+........+.+|++...+ ..+.+ -.+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llT---Gd~~~~a~~ia~~lgi~~~~~--~~p~~-K~~ 620 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLT---GDNPRAAAAIAGELGIDFRAG--LLPED-KVK 620 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCeecC--CCHHH-HHH
Confidence 355677777877653 67889999999999999999999999 556666666679999974222 11111 112
Q ss_pred HHHhCCCCCCcEEEEEeCc-chHHHHHHcCCcc
Q 019928 158 YLKSIDFPKDKKVYVVGED-GILKELELAGFQY 189 (334)
Q Consensus 158 ~l~~~~~~~~~~~~~~G~~-~~~~~l~~~G~~~ 189 (334)
.++.... ...+.++|.. .....++.+++-+
T Consensus 621 ~v~~l~~--~~~v~mvGDgiNDapAl~~A~vgi 651 (741)
T PRK11033 621 AVTELNQ--HAPLAMVGDGINDAPAMKAASIGI 651 (741)
T ss_pred HHHHHhc--CCCEEEEECCHHhHHHHHhCCeeE
Confidence 2332221 1357777742 2345667776544
No 266
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=65.52 E-value=17 Score=27.75 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=41.7
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
..+.+++|+-|+=+-.......-.+..+.++..|..+.++. ...++.+.|+..|++.
T Consensus 40 ~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~~l~l~g-----~~~~v~~~l~~~gl~~ 96 (109)
T cd07041 40 RARGVIIDLTGVPVIDSAVARHLLRLARALRLLGARTILTG-----IRPEVAQTLVELGIDL 96 (109)
T ss_pred CCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCCeEEEEe-----CCHHHHHHHHHhCCCh
Confidence 57899999999876333333333567788888999988877 4567788888888864
No 267
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=65.06 E-value=27 Score=30.96 Aligned_cols=79 Identities=23% Similarity=0.213 Sum_probs=48.3
Q ss_pred cCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH---------HHHHHHHHhCCCCCCcEEE
Q 019928 101 IDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS---------FAAAAYLKSIDFPKDKKVY 171 (334)
Q Consensus 101 ~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~---------~~~~~~l~~~~~~~~~~~~ 171 (334)
+|++.+.|+.|++. ++++++||+... ++..|+....+.++.+. ......++..+... ..++
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~-~~~~ 184 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPI-GEIL 184 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCCh-hHEE
Confidence 46788899999875 899999995432 25566643333444332 22333445555543 4467
Q ss_pred EEeCc--chHHHHHHcCCcc
Q 019928 172 VVGED--GILKELELAGFQY 189 (334)
Q Consensus 172 ~~G~~--~~~~~l~~~G~~~ 189 (334)
++|.. ......+..|++.
T Consensus 185 ~VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 185 HVGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EEcCCcHHHHHHHHHCCCeE
Confidence 77754 4566677888865
No 268
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=64.88 E-value=14 Score=36.40 Aligned_cols=48 Identities=15% Similarity=0.164 Sum_probs=36.2
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEe
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFA 150 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~ 150 (334)
++|++.+.|+.|++.|+++.++||+ +...+...++.+|+....+.+++
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~---~~~~~~~~l~~~~l~~~f~~i~~ 378 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNG---LTEYLRAIVSYYDLDQWVTETFS 378 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHCCcHhhcceeEe
Confidence 4788899999999999999999973 44556667788888643344444
No 269
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=64.07 E-value=40 Score=29.20 Aligned_cols=83 Identities=12% Similarity=0.143 Sum_probs=48.9
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcC-cEEecH---------HHHHHHHHhCCCCCCcE
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEE-EIFASS---------FAAAAYLKSIDFPKDKK 169 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~-~i~~~~---------~~~~~~l~~~~~~~~~~ 169 (334)
+++++.+.|+.| ++++.++||+ +...+...++.+|+....+ .++++. ......++..++.. ..
T Consensus 89 ~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p-~~ 161 (221)
T PRK10563 89 PIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV-EN 161 (221)
T ss_pred cCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH-HH
Confidence 355666666665 5899999983 3445566678888864443 344432 23334455556543 33
Q ss_pred EEEEeC-cchHHHHHHcCCcc
Q 019928 170 VYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 170 ~~~~G~-~~~~~~l~~~G~~~ 189 (334)
+.++|. ..-.+..+..|++.
T Consensus 162 ~l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 162 CILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred eEEEeCcHhhHHHHHHCCCEE
Confidence 555553 34456667788865
No 270
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=63.48 E-value=21 Score=27.05 Aligned_cols=56 Identities=14% Similarity=0.264 Sum_probs=39.6
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
..+.+++|+.++=.-+.....--.+..+.+++.|..+.++. ....+.+.++..|+.
T Consensus 42 ~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~~l~ 97 (108)
T TIGR00377 42 GPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQLVLVS-----VSPRVARLLDITGLL 97 (108)
T ss_pred CCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCCEEEEEe-----CCHHHHHHHHHhChh
Confidence 67899999999775333333323567777888899887777 456777777777774
No 271
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=63.32 E-value=24 Score=32.48 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=33.2
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
-++.|++.+.++.|++.|++++++|+. ...-+...++.+|+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G---~~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAG---IGNVLEEVLRQAGVY 161 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCC---cHHHHHHHHHHcCCC
Confidence 456889999999999999999999962 334555567778875
No 272
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=63.04 E-value=43 Score=30.10 Aligned_cols=40 Identities=13% Similarity=0.013 Sum_probs=23.3
Q ss_pred CCccEEEEEecCCCCHHHHHHHHHhHHcCCCcEEEEecCCcccc
Q 019928 212 KDVGAVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTH 255 (334)
Q Consensus 212 ~~~~~vv~~~~~~~~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~ 255 (334)
.++|+|++....-..++-+.+.-.. -|.+++.+|.-..|+
T Consensus 180 ~~aDAifisCTnLrt~~vi~~lE~~----lGkPVlsSNqat~W~ 219 (239)
T TIGR02990 180 PDADALFLSCTALRAATCAQRIEQA----IGKPVVTSNQATAWR 219 (239)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHH----HCCCEEEHHHHHHHH
Confidence 3577888874433344444443333 378888888655543
No 273
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=62.34 E-value=17 Score=27.43 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=40.7
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
..+.+++|+-++=+-.......-.+..+.+++.|..+.++. ....+.+.++..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~ 93 (100)
T cd06844 38 AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTG-----ISPAVRITLTESGLD 93 (100)
T ss_pred CCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEEC-----CCHHHHHHHHHhCch
Confidence 47899999999886433333323567788899999988777 456777778888774
No 274
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=61.91 E-value=20 Score=26.39 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=38.3
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.+++|+.++=.=+......-.+..+.+++.|..+.+.. ....+.+.++..|+.
T Consensus 38 ~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~~v~i~~-----~~~~~~~~l~~~gl~ 92 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVN-----VSPAVRRVLELTGLD 92 (99)
T ss_pred CCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCCeEEEEc-----CCHHHHHHHHHhCcc
Confidence 6899999999765333333323567788888898877666 345777778888774
No 275
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=60.07 E-value=23 Score=29.39 Aligned_cols=40 Identities=25% Similarity=0.297 Sum_probs=30.2
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+.+++.+.++.+++.|++++++|+. ....+...++.+|++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~---~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGG---FDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCC---cHHHHHHHHHHcCCc
Confidence 3577889999999999999999962 334444556778875
No 276
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=59.03 E-value=38 Score=32.20 Aligned_cols=37 Identities=19% Similarity=0.216 Sum_probs=31.1
Q ss_pred HHHHHhCCCCCcEEEEccCchhHHHHHH-HcCCcEEEE
Q 019928 293 YLANKFGIQKSQICMVGDRLDTDILFGQ-NGGCKTLLV 329 (334)
Q Consensus 293 ~~~~~lgi~~~evi~VGDs~~~DI~~a~-~aG~~tv~V 329 (334)
..++.-|+.-.+|+.|||.++.|+.... ..|++|-.|
T Consensus 337 ~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 337 SFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred HHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 4566668888999999999999999887 889887554
No 277
>PRK10671 copA copper exporting ATPase; Provisional
Probab=58.05 E-value=59 Score=34.85 Aligned_cols=102 Identities=19% Similarity=0.208 Sum_probs=64.6
Q ss_pred cCcEEEEecceeEE----eCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHH
Q 019928 82 SVETFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAA 157 (334)
Q Consensus 82 ~ik~viFDiDGTL~----d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~ 157 (334)
....+++-.||++. -.+.+.+++.+.|+.|++.|+++.++|+ .+........+.+|++.-..++.. ..-.+
T Consensus 629 g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~p--~~K~~ 703 (834)
T PRK10671 629 GATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVLP--DGKAE 703 (834)
T ss_pred CCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCCH--HHHHH
Confidence 34567777787754 4678889999999999999999999994 455555666688999632212111 11112
Q ss_pred HHHhCCCCCCcEEEEEeC-cchHHHHHHcCCcc
Q 019928 158 YLKSIDFPKDKKVYVVGE-DGILKELELAGFQY 189 (334)
Q Consensus 158 ~l~~~~~~~~~~~~~~G~-~~~~~~l~~~G~~~ 189 (334)
.+++... .+..+.++|. ......++.+|+-+
T Consensus 704 ~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 704 AIKRLQS-QGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred HHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 2333222 2345777775 34566777777744
No 278
>PLN02645 phosphoglycolate phosphatase
Probab=57.78 E-value=1e+02 Score=28.59 Aligned_cols=88 Identities=15% Similarity=-0.023 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCc--ccccCCCCHHHHHHHHHHhCCCCCc
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQRE--PLVVGKPSTFMMDYLANKFGIQKSQ 304 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~~gKP~~~~~~~~~~~lgi~~~e 304 (334)
++...+++..+++++...+++||......... ...+. ..|.+ ....-. +.......++..+....+
T Consensus 46 ~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~----------~~~l~-~lGi~~~~~~I~t-s~~~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 46 IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQY----------GKKFE-SLGLNVTEEEIFS-SSFAAAAYLKSINFPKDK 113 (311)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHH----------HHHHH-HCCCCCChhhEee-hHHHHHHHHHhhccCCCC
Confidence 45567778888876666778888664322111 11111 11111 100111 122344455555654445
Q ss_pred EEEEccCchhHHHHHHHcCCcEE
Q 019928 305 ICMVGDRLDTDILFGQNGGCKTL 327 (334)
Q Consensus 305 vi~VGDs~~~DI~~a~~aG~~tv 327 (334)
.++++++. .+.+.++++|+.++
T Consensus 114 ~V~viG~~-~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 114 KVYVIGEE-GILEELELAGFQYL 135 (311)
T ss_pred EEEEEcCH-HHHHHHHHCCCEEe
Confidence 67777787 89999999999764
No 279
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=57.54 E-value=28 Score=31.47 Aligned_cols=46 Identities=22% Similarity=0.368 Sum_probs=41.0
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEcc
Q 019928 283 VGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVLS 331 (334)
Q Consensus 283 ~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~t 331 (334)
.|| ...|+.+.+++|-+.-.-++|||.. .--++|+..++..+-|.+
T Consensus 213 vGK--~~cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 213 VGK--LQCFKWIKERFGHPKVRFCAIGDGW-EECTAAQAMNWPFVKIDL 258 (274)
T ss_pred cch--HHHHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhcCCCeEEeec
Confidence 455 7899999999999889999999999 889999999999887765
No 280
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=55.88 E-value=6.6 Score=39.02 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=16.3
Q ss_pred CcEEEEecceeEEeCCeecCC
Q 019928 83 VETFIFDCDGVIWKGDKLIDG 103 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~ 103 (334)
.++++||+||||+.+...+|.
T Consensus 8 ~~~~~fD~DGTLlrs~ssFpy 28 (498)
T PLN02499 8 SYSVVSELEGTLLKDADPFSY 28 (498)
T ss_pred cceEEEecccceecCCCccHH
Confidence 457999999999986655443
No 281
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=54.30 E-value=44 Score=32.15 Aligned_cols=32 Identities=28% Similarity=0.312 Sum_probs=23.0
Q ss_pred CCCCCcEEEEccCch----hHHHHHHHcCCcEEEEccc
Q 019928 299 GIQKSQICMVGDRLD----TDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 299 gi~~~evi~VGDs~~----~DI~~a~~aG~~tv~V~tG 332 (334)
++.++++++|||.+. ||. .|+.+| .|+||.+.
T Consensus 366 ~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIasP 401 (408)
T PF06437_consen 366 GIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIASP 401 (408)
T ss_pred CCCccceeeehhhhhccCCcch-hhhhhc-eeeEecCH
Confidence 899999999999872 444 344444 67888753
No 282
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=54.24 E-value=16 Score=31.95 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=28.7
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~l 139 (334)
.++|++.+.|+.+++.|++++++||+ ....+...++.+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGG---MDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCC---cHHHHHHHHHHh
Confidence 45788889999999999999999973 233444455665
No 283
>PRK11590 hypothetical protein; Provisional
Probab=54.02 E-value=27 Score=30.42 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=29.4
Q ss_pred eecCCHHHHH-HHHHHCCCeEEEEeCCCCCCHHHHHH-HHHHcCC
Q 019928 99 KLIDGVPETL-DMLRSKGKRLVFVTNNSTKSRKQYGK-KFETLGL 141 (334)
Q Consensus 99 ~~~~~a~~aL-~~L~~~G~~v~i~Tn~sgrs~~~~~~-~l~~lGl 141 (334)
.++|++.+.| +.+++.|++++++|| ++..+.+ .++.+|+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSa----s~~~~~~~il~~l~~ 135 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITG----SPQPLVEQVYFDTPW 135 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeC----CcHHHHHHHHHHccc
Confidence 3478899999 568889999999997 4445444 4577775
No 284
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=52.09 E-value=2.3e+02 Score=27.96 Aligned_cols=64 Identities=22% Similarity=0.207 Sum_probs=38.4
Q ss_pred HHHHHHHHH-HcCCCCCcCcEEecHHHH--HHHHHhCCCCCCcEEEE--EeCcchHHHHHHcCCcccCC
Q 019928 129 RKQYGKKFE-TLGLTVTEEEIFASSFAA--AAYLKSIDFPKDKKVYV--VGEDGILKELELAGFQYLGG 192 (334)
Q Consensus 129 ~~~~~~~l~-~lGl~~~~~~i~~~~~~~--~~~l~~~~~~~~~~~~~--~G~~~~~~~l~~~G~~~~~~ 192 (334)
++.+++++. ..|+...+++++..+++. .+.+...-...+..+.+ .+-......++..|+++...
T Consensus 138 R~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v 206 (459)
T COG1167 138 REAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV 206 (459)
T ss_pred HHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec
Confidence 457788886 899999888765554332 23333332333333333 23456788888899887543
No 285
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=51.92 E-value=45 Score=35.60 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=48.5
Q ss_pred hcCcEEEEecceeEEe----CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 81 DSVETFIFDCDGVIWK----GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d----~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
...-++.+=+||+|.- .+++-+++.+++..|++.|++++++| |-........-+++|++.
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT---GDn~~aA~svA~~VGi~~ 764 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT---GDNDAAARSVAQQVGIDN 764 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc---CCCHHHHHHHHHhhCcce
Confidence 3456899999999976 77888999999999999999999999 455555555558899753
No 286
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=49.18 E-value=32 Score=30.55 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=31.0
Q ss_pred EEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHH
Q 019928 94 IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQY 132 (334)
Q Consensus 94 L~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~ 132 (334)
++....+.|++.+.++.|+..|+++.++|+....+.+.-
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k 125 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELK 125 (222)
T ss_pred hccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHH
Confidence 344567789999999999999999999998655555443
No 287
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=46.67 E-value=45 Score=28.42 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=29.4
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
++|++.+.|+.|++. ++++++||+ ........++.+|++
T Consensus 69 ~~pg~~e~L~~L~~~-~~~~IvS~~---~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 69 PLPGAVEFLDWLRER-FQVVILSDT---FYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCHHHHHHHHHhc-CCEEEEeCC---cHHHHHHHHHHcCCc
Confidence 368888999999999 999999972 334444556888875
No 288
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=46.53 E-value=46 Score=28.95 Aligned_cols=39 Identities=23% Similarity=0.456 Sum_probs=29.9
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH-HHHHHcCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYG-KKFETLGLT 142 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~-~~l~~lGl~ 142 (334)
+++|++.+.|+.+++.+ +++++|+ +...+. ..++.+|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~----~~~~~~~~il~~lgi~ 107 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSD----TFYEFSQPLMRQLGFP 107 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeC----ChHHHHHHHHHHcCCc
Confidence 56888999999999975 9999997 333344 445889986
No 289
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=45.96 E-value=48 Score=34.66 Aligned_cols=95 Identities=16% Similarity=0.176 Sum_probs=59.7
Q ss_pred CcEEEEecceeEE----eCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHH---
Q 019928 83 VETFIFDCDGVIW----KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAA--- 155 (334)
Q Consensus 83 ik~viFDiDGTL~----d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~--- 155 (334)
...+.+-.|++++ =.+.+-+++.+++++|++.|+++.++| |-++......-+++|++ +++....+.
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiT---GDn~~TA~aIA~elGId----~v~A~~~PedK~ 497 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMIT---GDNPLTAAAIAAEAGVD----DFLAEATPEDKL 497 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCc----EEEccCCHHHHH
Confidence 4556665555544 467778899999999999999999999 55666666566889995 233332221
Q ss_pred --HHHHHhCCCCCCcEEEEEeC-cchHHHHHHcCCc
Q 019928 156 --AAYLKSIDFPKDKKVYVVGE-DGILKELELAGFQ 188 (334)
Q Consensus 156 --~~~l~~~~~~~~~~~~~~G~-~~~~~~l~~~G~~ 188 (334)
.+.+++. ++.+.+.|. -.....|+++.+-
T Consensus 498 ~iV~~lQ~~----G~~VaMtGDGvNDAPALa~ADVG 529 (679)
T PRK01122 498 ALIRQEQAE----GRLVAMTGDGTNDAPALAQADVG 529 (679)
T ss_pred HHHHHHHHc----CCeEEEECCCcchHHHHHhCCEe
Confidence 1223322 345666664 2344566776443
No 290
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=45.67 E-value=45 Score=34.84 Aligned_cols=81 Identities=19% Similarity=0.157 Sum_probs=52.2
Q ss_pred CCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHH-----HHHHHHhCCCCCCcEEE
Q 019928 97 GDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFA-----AAAYLKSIDFPKDKKVY 171 (334)
Q Consensus 97 ~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~-----~~~~l~~~~~~~~~~~~ 171 (334)
.+.+-+++.+++++|++.|+++.++| |-++......-+++|++. ++....+ ..+.+++. ++.+.
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiT---GDn~~TA~aIA~elGI~~----v~A~~~PedK~~iV~~lQ~~----G~~Va 507 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCT---GDNELTAATIAKEAGVDR----FVAECKPEDKINVIREEQAK----GHIVA 507 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEEC---CCCHHHHHHHHHHcCCce----EEcCCCHHHHHHHHHHHHhC----CCEEE
Confidence 66778889999999999999999999 566666666668999952 3332211 11223332 34566
Q ss_pred EEeCc-chHHHHHHcCCc
Q 019928 172 VVGED-GILKELELAGFQ 188 (334)
Q Consensus 172 ~~G~~-~~~~~l~~~G~~ 188 (334)
+.|.. .....|+++.+-
T Consensus 508 MtGDGvNDAPALa~ADVG 525 (673)
T PRK14010 508 MTGDGTNDAPALAEANVG 525 (673)
T ss_pred EECCChhhHHHHHhCCEE
Confidence 66542 244566776543
No 291
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=44.53 E-value=3.2e+02 Score=27.71 Aligned_cols=173 Identities=14% Similarity=0.188 Sum_probs=0.0
Q ss_pred cCcEEEEecceeEEeCCeecCCHHH-------------HHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCc-
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPE-------------TLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEE- 147 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~-------------aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~- 147 (334)
.++.+++|--||++-+++.-.+... .+..|...--. |||.-.++ +++|++.+.++
T Consensus 298 DvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpE--------GrSIV~LA---~~~~~~~~~~~~ 366 (681)
T COG2216 298 DVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPE--------GRSIVELA---KKLGIELREDDL 366 (681)
T ss_pred CccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCC--------cccHHHHH---HHhccCCCcccc
Q ss_pred ---EEecHHHHHHHHHhCCCCCCcEEEEEeCcchHHHHHHcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCC
Q 019928 148 ---IFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELELAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRY 224 (334)
Q Consensus 148 ---i~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~ 224 (334)
.--.-..+...+....+..++.+..-..+.+.+..++.|-.+
T Consensus 367 ~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~----------------------------------- 411 (681)
T COG2216 367 QSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHI----------------------------------- 411 (681)
T ss_pred cccceeeecceecccccccCCCCceeecccHHHHHHHHHhcCCCC-----------------------------------
Q ss_pred CCHHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCc
Q 019928 225 FNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQ 304 (334)
Q Consensus 225 ~~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~e 304 (334)
.++++.....+.+..|-++.++..+...-....+ --=+|-+-++..+.-.+..+.
T Consensus 412 --p~~l~~~~~~vs~~GGTPL~V~~~~~~~GVI~Lk-----------------------DivK~Gi~ERf~elR~MgIkT 466 (681)
T COG2216 412 --PEDLDAAVDEVSRLGGTPLVVVENGRILGVIYLK-----------------------DIVKPGIKERFAELRKMGIKT 466 (681)
T ss_pred --CHHHHHHHHHHHhcCCCceEEEECCEEEEEEEeh-----------------------hhcchhHHHHHHHHHhcCCeE
Q ss_pred EEEEccCchhHHHHHHHcCCc
Q 019928 305 ICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 305 vi~VGDs~~~DI~~a~~aG~~ 325 (334)
+++-||++.+--.-|+++|++
T Consensus 467 vM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 467 VMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred EEEeCCCHHHHHHHHHHhCch
No 292
>PRK08508 biotin synthase; Provisional
Probab=44.48 E-value=2.5e+02 Score=25.64 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHCCCeEEE-EeCCCCCCHHHHHHHHHHcCCCC
Q 019928 103 GVPETLDMLRSKGKRLVF-VTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 103 ~a~~aL~~L~~~G~~v~i-~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
...+.++.+++.+..+.+ +++ |....+..+.|+..|++.
T Consensus 76 ~~~ei~~~ik~~~p~l~i~~s~--G~~~~e~l~~Lk~aGld~ 115 (279)
T PRK08508 76 YVAEAAKAVKKEVPGLHLIACN--GTASVEQLKELKKAGIFS 115 (279)
T ss_pred HHHHHHHHHHhhCCCcEEEecC--CCCCHHHHHHHHHcCCCE
Confidence 345777888877544443 343 666677888888988863
No 293
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=42.96 E-value=49 Score=36.59 Aligned_cols=47 Identities=13% Similarity=0.218 Sum_probs=29.9
Q ss_pred hcCCcccccCCCCH----HHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCc
Q 019928 275 STQREPLVVGKPST----FMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 275 ~~~~~~~~~gKP~~----~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~ 325 (334)
+.......+.+-+| .+...+.+. ...-+++|||.. ||+.|.+.|.+.
T Consensus 766 a~~C~sViCCR~sPlQKA~Vv~lVk~~---~~~~TLAIGDGA-NDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 766 AKRCKSVICCRVSPLQKALVVKLVKKG---LKAVTLAIGDGA-NDVSMIQEAHVG 816 (1151)
T ss_pred HHhcCEEEEccCCHHHHHHHHHHHHhc---CCceEEEeeCCC-ccchheeeCCcC
Confidence 33444444444444 333444223 345799999999 999999988765
No 294
>PHA02597 30.2 hypothetical protein; Provisional
Probab=42.73 E-value=1.9e+02 Score=24.30 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=45.0
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH--HHcCCCCCcCcEEec------HHHHHHHHHhCCCCCCcEE
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF--ETLGLTVTEEEIFAS------SFAAAAYLKSIDFPKDKKV 170 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l--~~lGl~~~~~~i~~~------~~~~~~~l~~~~~~~~~~~ 170 (334)
.++|++.+.|+.|++.+ ++.++||..........+.+ ..+.... .+.++.. .......++..+ + +.+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~-f~~i~~~~~~~~kp~~~~~a~~~~~-~--~~~ 148 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA-FSEVLMCGHDESKEKLFIKAKEKYG-D--RVV 148 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc-ccEEEEeccCcccHHHHHHHHHHhC-C--CcE
Confidence 46888999999999874 67778874443332233222 2222111 1222221 222223344444 2 345
Q ss_pred EEEeC-cchHHHHHHc--CCccc
Q 019928 171 YVVGE-DGILKELELA--GFQYL 190 (334)
Q Consensus 171 ~~~G~-~~~~~~l~~~--G~~~~ 190 (334)
+++|. ..-.+..+.+ |++.+
T Consensus 149 v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 149 CFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred EEeCCCHHHHHHHHHHHcCCcEE
Confidence 55554 3346666777 88764
No 295
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=42.36 E-value=38 Score=29.63 Aligned_cols=19 Identities=26% Similarity=0.438 Sum_probs=16.0
Q ss_pred CcEEEEecceeEEeCCeec
Q 019928 83 VETFIFDCDGVIWKGDKLI 101 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~ 101 (334)
.+.++||+||||++.+...
T Consensus 5 ~~la~FDfDgTLt~~ds~~ 23 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQDMFG 23 (210)
T ss_pred CcEEEEcCCCCCccCccHH
Confidence 5689999999999987653
No 296
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=42.19 E-value=55 Score=25.46 Aligned_cols=57 Identities=21% Similarity=0.301 Sum_probs=41.7
Q ss_pred cCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Q 019928 82 SVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV 143 (334)
Q Consensus 82 ~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~ 143 (334)
+.+.+++|+.|+=+-+....---...++.++..|..+.++. ...++++.+...|++.
T Consensus 43 ~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~~-----i~p~v~~~~~~~gl~~ 99 (117)
T COG1366 43 GARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLVG-----IQPEVARTLELTGLDK 99 (117)
T ss_pred CCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEEe-----CCHHHHHHHHHhCchh
Confidence 45569999999876433322223467788899998888887 5678888889999864
No 297
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=38.31 E-value=67 Score=27.84 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=29.4
Q ss_pred CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Q 019928 98 DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLG 140 (334)
Q Consensus 98 ~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lG 140 (334)
..+.|++.+.++.+++.|+++.++|++ ....+...++.++
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~---~~~~i~~il~~~~ 108 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGG---MDFFVYPLLEGIV 108 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHhhC
Confidence 356788999999999999999999973 3333444456553
No 298
>PRK08238 hypothetical protein; Validated
Probab=36.52 E-value=86 Score=31.32 Aligned_cols=39 Identities=26% Similarity=0.336 Sum_probs=29.8
Q ss_pred ecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 100 LIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 100 ~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
..+++.+.+++++++|.+++++|+ .+.......++.+|+
T Consensus 73 ~~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl 111 (479)
T PRK08238 73 YNEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL 111 (479)
T ss_pred CChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC
Confidence 357889999999999999999996 233334444588886
No 299
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=35.51 E-value=2.1e+02 Score=29.91 Aligned_cols=91 Identities=12% Similarity=-0.024 Sum_probs=50.3
Q ss_pred EEEEEecCCCCHHHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHH
Q 019928 216 AVVVGFDRYFNYYKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLA 295 (334)
Q Consensus 216 ~vv~~~~~~~~~~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~ 295 (334)
+++...|+.. ++..+....+++ .|+..+.-.-|.. .-+..+....|.+.... -=.|+-=..+.
T Consensus 434 G~i~l~Dp~R--~~a~e~I~~Lr~-~GI~vvMiTGDn~-------------~TA~aIA~elGI~~v~A-~~~PedK~~iV 496 (673)
T PRK14010 434 GVIYLKDVIK--DGLVERFRELRE-MGIETVMCTGDNE-------------LTAATIAKEAGVDRFVA-ECKPEDKINVI 496 (673)
T ss_pred EEEEeecCCc--HHHHHHHHHHHH-CCCeEEEECCCCH-------------HHHHHHHHHcCCceEEc-CCCHHHHHHHH
Confidence 3333344443 345666677765 3665443333331 11455555555543222 22344333444
Q ss_pred HHhCCCCCcEEEEccCchhHHHHHHHcCC
Q 019928 296 NKFGIQKSQICMVGDRLDTDILFGQNGGC 324 (334)
Q Consensus 296 ~~lgi~~~evi~VGDs~~~DI~~a~~aG~ 324 (334)
+.+.-.-+-+.|+||.. ||..+.++|.+
T Consensus 497 ~~lQ~~G~~VaMtGDGv-NDAPALa~ADV 524 (673)
T PRK14010 497 REEQAKGHIVAMTGDGT-NDAPALAEANV 524 (673)
T ss_pred HHHHhCCCEEEEECCCh-hhHHHHHhCCE
Confidence 44443345699999999 99999999975
No 300
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=35.48 E-value=3.5e+02 Score=24.65 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCCCcEEEEccCc-----hhHHHHHHHcCCcEEEEc
Q 019928 290 MMDYLANKFGIQKSQICMVGDRL-----DTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 290 ~~~~~~~~lgi~~~evi~VGDs~-----~~DI~~a~~aG~~tv~V~ 330 (334)
.-...++++++ ++++-=||- +.=|++|.+.|+..|.|.
T Consensus 187 ~n~all~q~~i---d~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~ 229 (257)
T COG2099 187 DNKALLEQYRI---DVVVTKNSGGAGGTYEKIEAARELGIPVIMIE 229 (257)
T ss_pred HHHHHHHHhCC---CEEEEccCCcccCcHHHHHHHHHcCCcEEEEe
Confidence 33456667776 455544443 144889999999988874
No 301
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=35.42 E-value=2.3e+02 Score=28.64 Aligned_cols=26 Identities=19% Similarity=0.301 Sum_probs=22.4
Q ss_pred EEEEccCchhHHHHHHHcCCcEEEEccc
Q 019928 305 ICMVGDRLDTDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 305 vi~VGDs~~~DI~~a~~aG~~tv~V~tG 332 (334)
-++|||.. . ...|+++|+.+|+|.+|
T Consensus 147 ~~viG~~~-~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 147 GAVVGAGL-I-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred CEEECChH-H-HHHHHHcCCceEEEecH
Confidence 36789998 5 67899999999999886
No 302
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=35.19 E-value=19 Score=34.22 Aligned_cols=27 Identities=26% Similarity=0.133 Sum_probs=20.1
Q ss_pred HHHHHHHHHhHHcCCCcEEEEecCCcc
Q 019928 227 YYKVQYGTLCIRENPGCLFIATNRDAV 253 (334)
Q Consensus 227 ~~~l~~~~~~l~~~~g~~~i~tn~d~~ 253 (334)
++.+.+.+..+++.....+++||....
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~ 212 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYD 212 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 556777888888765567899998764
No 303
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=34.45 E-value=3.1e+02 Score=24.83 Aligned_cols=86 Identities=16% Similarity=0.099 Sum_probs=51.0
Q ss_pred CCCccEEEEEecCCCCHHHHHHHHHhHH-cCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHH
Q 019928 211 DKDVGAVVVGFDRYFNYYKVQYGTLCIR-ENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 289 (334)
Q Consensus 211 ~~~~~~vv~~~~~~~~~~~l~~~~~~l~-~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~ 289 (334)
+++++.-+++.+....-+.++++..... ++.--..|..+++. ..|-|.
T Consensus 28 RedI~vrv~gsGaKm~pe~~e~~~~~~~~~~~pdf~I~isPN~-------------------------------~~PGP~ 76 (276)
T PF01993_consen 28 REDIDVRVVGSGAKMGPEDVEEVVTKMLKEWDPDFVIVISPNA-------------------------------AAPGPT 76 (276)
T ss_dssp -SSEEEEEEEEET--SHHHHHHHHHHHHHHH--SEEEEE-S-T-------------------------------TSHHHH
T ss_pred cCCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCC-------------------------------CCCCcH
Confidence 3567788888888877777666554443 32222233333332 455566
Q ss_pred HHHHHHHHhCCCCCcEEEEccCchh-HHHHHHHcCCcEEEEc
Q 019928 290 MMDYLANKFGIQKSQICMVGDRLDT-DILFGQNGGCKTLLVL 330 (334)
Q Consensus 290 ~~~~~~~~lgi~~~evi~VGDs~~~-DI~~a~~aG~~tv~V~ 330 (334)
.-+.++..-|+ -|++|||.+.. +-+..++.|+.-|.|.
T Consensus 77 ~ARE~l~~~~i---P~IvI~D~p~~k~kd~l~~~g~GYIivk 115 (276)
T PF01993_consen 77 KAREMLSAKGI---PCIVISDAPTKKAKDALEEEGFGYIIVK 115 (276)
T ss_dssp HHHHHHHHSSS----EEEEEEGGGGGGHHHHHHTT-EEEEET
T ss_pred HHHHHHHhCCC---CEEEEcCCCchhhHHHHHhcCCcEEEEe
Confidence 66667777677 59999998822 4677888998888774
No 304
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=33.34 E-value=1.4e+02 Score=28.89 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 288 ~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
...|+.+.++||- .-.-++|||.. ..-.+|++..|...-|.
T Consensus 411 escFerI~~RFg~-K~~yvvIgdG~-eee~aAK~ln~PfwrI~ 451 (468)
T KOG3107|consen 411 ESCFERIQSRFGR-KVVYVVIGDGV-EEEQAAKALNMPFWRIS 451 (468)
T ss_pred HHHHHHHHHHhCC-ceEEEEecCcH-HHHHHHHhhCCceEeec
Confidence 6789999999998 56789999998 77889999998876664
No 305
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=33.14 E-value=1.1e+02 Score=27.93 Aligned_cols=59 Identities=20% Similarity=0.343 Sum_probs=48.6
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCc
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTE 145 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~ 145 (334)
.|.+++=+.|..++.+.+.....+.+..|+..|++.+++-. ...++.+.|+++|++...
T Consensus 2 ~k~~VIK~GG~~~~~~~l~~~~~~di~lL~~~G~~~VvVHG----ggp~I~~~l~~~gie~~f 60 (265)
T COG0548 2 GKTIVIKLGGSAMEDENLLEAFASDIALLKSVGIRPVVVHG----GGPQIDEMLAKLGIEPEF 60 (265)
T ss_pred CceEEEEECceeecCchHHHHHHHHHHHHHHCCCcEEEEeC----CchHHHHHHHHcCCCCee
Confidence 36788889999999888888888999999999999988885 345677888999997543
No 306
>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]
Probab=32.97 E-value=1.1e+02 Score=30.05 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=25.4
Q ss_pred hcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEE
Q 019928 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLV 119 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~ 119 (334)
...+.++.|||| +..+..+.+-|...++.++++.
T Consensus 539 A~P~~iViDIDG-----DaSF~Mt~~ELat~rq~~~PVK 572 (675)
T KOG4166|consen 539 ANPDAIVIDIDG-----DASFIMTVQELATIRQENLPVK 572 (675)
T ss_pred cCcccEEEeccC-----CceeeeehHhhhhhhhcCCceE
Confidence 467899999999 3344456667788889998874
No 307
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=32.78 E-value=30 Score=24.15 Aligned_cols=24 Identities=54% Similarity=0.726 Sum_probs=14.7
Q ss_pred HHHHHHhCCCCCcEEEEccCchhHHHHHH
Q 019928 292 DYLANKFGIQKSQICMVGDRLDTDILFGQ 320 (334)
Q Consensus 292 ~~~~~~lgi~~~evi~VGDs~~~DI~~a~ 320 (334)
...++++|+ .+.+||.. .||++..
T Consensus 8 qQLLK~fG~----~IY~gdr~-~DielM~ 31 (62)
T PF06014_consen 8 QQLLKKFGI----IIYVGDRL-WDIELME 31 (62)
T ss_dssp HHHHHTTS---------S-HH-HHHHHHH
T ss_pred HHHHHHCCE----EEEeCChH-HHHHHHH
Confidence 467888887 89999999 9999864
No 308
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=32.46 E-value=1.1e+02 Score=26.78 Aligned_cols=52 Identities=25% Similarity=0.502 Sum_probs=35.8
Q ss_pred cHHHHhhcCcEEEEecceeEEeCCee-cC-CHHHHHHHHHHCCCeEEEEeCCCC
Q 019928 75 NADELIDSVETFIFDCDGVIWKGDKL-ID-GVPETLDMLRSKGKRLVFVTNNST 126 (334)
Q Consensus 75 ~~~~~~~~ik~viFDiDGTL~d~~~~-~~-~a~~aL~~L~~~G~~v~i~Tn~sg 126 (334)
...++++.++..-...-|+.+.+... ++ ...+.++.+++.|+++.+-||.+-
T Consensus 57 ~~~~I~~~i~~~~~~~~~V~lTGGEP~~~~~l~~Ll~~l~~~g~~~~lETngti 110 (212)
T COG0602 57 SADEILADIKSLGYKARGVSLTGGEPLLQPNLLELLELLKRLGFRIALETNGTI 110 (212)
T ss_pred CHHHHHHHHHhcCCCcceEEEeCCcCCCcccHHHHHHHHHhCCceEEecCCCCc
Confidence 34555566655544444776665544 43 578899999999999999998543
No 309
>PRK11660 putative transporter; Provisional
Probab=31.49 E-value=92 Score=31.74 Aligned_cols=67 Identities=12% Similarity=0.107 Sum_probs=43.4
Q ss_pred hcCcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC--CcCcEEecHH
Q 019928 81 DSVETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTV--TEEEIFASSF 153 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~--~~~~i~~~~~ 153 (334)
++.+.+++|+.++=.-+......-.+..+++++ |.++.++. -...+.+.++..|+.. ....++...+
T Consensus 489 ~~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~-g~~l~l~~-----l~~~v~~~l~~~gl~~~~~~~~if~~~~ 557 (568)
T PRK11660 489 EGKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE-GCELRICN-----LQFQPLRTLARAGIQPIPGRLAFYPTLR 557 (568)
T ss_pred CCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-CCEEEEec-----CChHHHHHHHHCCChhhcCcccccCCHH
Confidence 467899999999765333333333567788888 98887766 4456788888888843 2234444443
No 310
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=31.25 E-value=88 Score=20.36 Aligned_cols=32 Identities=31% Similarity=0.337 Sum_probs=21.5
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETL 139 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~l 139 (334)
.+++++.+.+++|++.|+.+ +++.+.+.++..
T Consensus 16 GlI~~~~~~l~~l~~~g~~i---------s~~l~~~~L~~~ 47 (48)
T PF11848_consen 16 GLISEVKPLLDRLQQAGFRI---------SPKLIEEILRRA 47 (48)
T ss_pred CChhhHHHHHHHHHHcCccc---------CHHHHHHHHHHc
Confidence 44556778888888888765 566666555544
No 311
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=30.07 E-value=18 Score=25.16 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=21.5
Q ss_pred cEEEEecceeEEeCCeecCCHHHHHHHH
Q 019928 84 ETFIFDCDGVIWKGDKLIDGVPETLDML 111 (334)
Q Consensus 84 k~viFDiDGTL~d~~~~~~~a~~aL~~L 111 (334)
..|+||=|+.-+|+..++|....+.+.+
T Consensus 25 s~iiFDNded~tdSa~llp~ie~a~~~~ 52 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAALLPAIEQARADV 52 (65)
T ss_pred CCeeecCCCcccchHHHHHHHHHHHHHH
Confidence 3699999999999988887655554444
No 312
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=29.72 E-value=1.4e+02 Score=26.19 Aligned_cols=65 Identities=22% Similarity=0.395 Sum_probs=49.7
Q ss_pred cHHHHhhcCcEEEEecceeEEeC--------------------------------------------------------C
Q 019928 75 NADELIDSVETFIFDCDGVIWKG--------------------------------------------------------D 98 (334)
Q Consensus 75 ~~~~~~~~ik~viFDiDGTL~d~--------------------------------------------------------~ 98 (334)
...+++.+.++|.||+|-|++-. -
T Consensus 8 e~~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~ 87 (227)
T KOG1615|consen 8 ELAKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKP 87 (227)
T ss_pred HHHHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCC
Confidence 34566788999999999999852 1
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCC
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLTV 143 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~~ 143 (334)
++-|++.+..+.|++.|..++++|. - -..+.... ..+|++.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSG---G-F~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISG---G-FRQLIEPVAEQLGIPK 129 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcC---C-hHHHHHHHHHHhCCcH
Confidence 5578888999999999999999994 2 33344443 7788875
No 313
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=29.47 E-value=83 Score=29.10 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=39.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHH------HHcCCcEEEEcccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFG------QNGGCKTLLVLSGK 333 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a------~~aG~~tv~V~tG~ 333 (334)
--|+++.|...++.+||+.++.|++=|.. +..-++ +-.|..-|.|+-|-
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd~-~~~~A~ra~W~l~~~Gh~~V~iLdGG 125 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDDG-GGFFAARAWWLLRYLGHENVRILDGG 125 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCC-CCeehHHHHHHHHHcCCCceEEecCC
Confidence 56889999999999999999988887766 555444 55788888888774
No 314
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=29.05 E-value=26 Score=33.85 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=37.6
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHH-HHHcCCcEEEE
Q 019928 282 VVGKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILF-GQNGGCKTLLV 329 (334)
Q Consensus 282 ~~gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~-a~~aG~~tv~V 329 (334)
..+++++-.-+.+++.++..-.++++|||....||.- -+.-|++|++|
T Consensus 284 ~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv 332 (424)
T KOG2469|consen 284 QGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLV 332 (424)
T ss_pred hcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEE
Confidence 3577777888899999999889999999999777643 34566677666
No 315
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=28.23 E-value=1.8e+02 Score=23.47 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCc-EEEEccC---ch---hHHHHHHHcCCcEEEEccc
Q 019928 284 GKPSTFMMDYLANKFGIQKSQ-ICMVGDR---LD---TDILFGQNGGCKTLLVLSG 332 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~e-vi~VGDs---~~---~DI~~a~~aG~~tv~V~tG 332 (334)
..|.++-|...++.+|++++. +|+.+++ -. .-.-+++.+|..-|.|..|
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildG 131 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDG 131 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCC
Confidence 467778899999999998765 5556553 10 1123667789888887766
No 316
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=28.18 E-value=98 Score=25.18 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=42.7
Q ss_pred hhHhhhhhhhcccCCCCCCceeeeeeeeeeeccceeeccccceecccCCccccccccccccccccccccCCCccHHHH-h
Q 019928 2 LSKAVASAVSVTLNPKTTSKFFGLKRVSFVSSDSLVFGGKNSSFNADGLKKSRSCSRMESFVTKASASAQPLKNADEL-I 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 80 (334)
++++--|++..-.-.++|+|=-.|.++...-|..+..-. . ++...+++ +
T Consensus 5 ~~ka~RS~~M~rIrs~dTkpE~~lr~~L~~~G~rfR~~~-------~-----------------------~lpGkPDiVl 54 (150)
T COG3727 5 HDKAKRSKVMRRIRSRDTKPEKRLRSLLTGQGLRFRVQD-------K-----------------------DLPGKPDIVL 54 (150)
T ss_pred hhHHHHHHHHHHHHccCccHHHHHHHHHhhcceEEEecC-------C-----------------------CCCCCCCEee
Confidence 466777888888888888997777777654443331111 1 11122222 4
Q ss_pred hcCcEEEEecceeEEeCCee
Q 019928 81 DSVETFIFDCDGVIWKGDKL 100 (334)
Q Consensus 81 ~~ik~viFDiDGTL~d~~~~ 100 (334)
+.|+++|| +-|.-|..+..
T Consensus 55 ~~y~~viF-vHGCFWh~H~c 73 (150)
T COG3727 55 PKYRCVIF-VHGCFWHGHHC 73 (150)
T ss_pred cCceEEEE-EeeeeccCCcc
Confidence 68999988 68999887654
No 317
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism]
Probab=27.98 E-value=3.7e+02 Score=25.59 Aligned_cols=57 Identities=19% Similarity=0.179 Sum_probs=42.2
Q ss_pred EecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Q 019928 88 FDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVT 144 (334)
Q Consensus 88 FDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~ 144 (334)
.|+.||=.|+...+.=...+---+-..|++++-=-|.+--+....+..|+.+|+++.
T Consensus 78 vDi~GTGGDg~~T~NiSt~aA~v~A~~Gv~VaKHGnrs~sSksGsaDvleaLGv~l~ 134 (338)
T COG0547 78 VDIVGTGGDGANTINISTAAAIVAAAAGVPVAKHGNRSVSSKSGSADVLEALGVNLE 134 (338)
T ss_pred CCeecCCCCCCCcccchHHHHHHHHhCCCcEEeECCCCCCCCCcHHHHHHHcCCCCC
Confidence 799999999877544333333445577899887777776677777888999999874
No 318
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=27.78 E-value=4.4e+02 Score=23.45 Aligned_cols=24 Identities=13% Similarity=0.198 Sum_probs=17.1
Q ss_pred cEEEEccCchhHHHHHHHcCCcEEEEc
Q 019928 304 QICMVGDRLDTDILFGQNGGCKTLLVL 330 (334)
Q Consensus 304 evi~VGDs~~~DI~~a~~aG~~tv~V~ 330 (334)
.+++||... -+.++++|+..+.+.
T Consensus 212 ~~~~ig~~t---a~a~~~~G~~~~~~a 235 (255)
T PRK05752 212 PLFVPSPRV---AEQARAAGAQTVVDC 235 (255)
T ss_pred eEEEeCHHH---HHHHHHcCCCceeeC
Confidence 478888777 456778888776654
No 319
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=27.54 E-value=5.6e+02 Score=24.60 Aligned_cols=106 Identities=13% Similarity=0.144 Sum_probs=62.2
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecHHHHHHHHHhCCCCCCcEEEEEeCcchHHHHH
Q 019928 104 VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASSFAAAAYLKSIDFPKDKKVYVVGEDGILKELE 183 (334)
Q Consensus 104 a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~~~~l~ 183 (334)
-.+.+.+|++.|+.++++|. | .++.=+..+|++..+..+-... .+..-+.. .+ ...+.+.|.
T Consensus 33 l~~~ia~L~~~G~eVilVSS--G----AiaaG~~~Lg~~~rp~~l~~kQ-----A~AAVGQ~----~L---m~~y~~~f~ 94 (369)
T COG0263 33 LVRQVAALHKAGHEVVLVSS--G----AIAAGRTRLGLPKRPKTLAEKQ-----AAAAVGQV----RL---MQLYEELFA 94 (369)
T ss_pred HHHHHHHHHhCCCEEEEEcc--c----hhhhChhhcCCCCCCcchHHHH-----HHHHhCHH----HH---HHHHHHHHH
Confidence 35789999999999999994 1 2333457788876665433221 11111100 00 122445566
Q ss_pred HcCCcccCCCCCCCcccccCCCcccCCCCCccEEEEEecCC---CCHHHHHHHHHhHHcCCCcEEEEecCCc
Q 019928 184 LAGFQYLGGPEDGGKKIELKPGFLMEHDKDVGAVVVGFDRY---FNYYKVQYGTLCIRENPGCLFIATNRDA 252 (334)
Q Consensus 184 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~---~~~~~l~~~~~~l~~~~g~~~i~tn~d~ 252 (334)
.+|+.+ .++.+..+.. ..|.+.+..+..|.+..-+++|-.|...
T Consensus 95 ~~g~~v-------------------------~QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDtv 141 (369)
T COG0263 95 RYGIKV-------------------------GQILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDTV 141 (369)
T ss_pred hcCCee-------------------------eEEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCce
Confidence 666654 3566554432 3677888888888876666776666443
No 320
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=27.45 E-value=98 Score=30.52 Aligned_cols=59 Identities=17% Similarity=0.270 Sum_probs=42.8
Q ss_pred EEEEecceeEEeC-CeecCCH-HHHHHHHHHCCCeEEEEeCCCCCCHH---HHHHHH-HHcCCCC
Q 019928 85 TFIFDCDGVIWKG-DKLIDGV-PETLDMLRSKGKRLVFVTNNSTKSRK---QYGKKF-ETLGLTV 143 (334)
Q Consensus 85 ~viFDiDGTL~d~-~~~~~~a-~~aL~~L~~~G~~v~i~Tn~sgrs~~---~~~~~l-~~lGl~~ 143 (334)
+++.--||++.|- +.-+..| ...+++|++.|+|++++-|+...... ++.+.| +.++.++
T Consensus 148 GiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpV 212 (492)
T PF09547_consen 148 GIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPV 212 (492)
T ss_pred eEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 6888999999983 3335555 47899999999999999986544433 344445 5677764
No 321
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=27.40 E-value=1.4e+02 Score=29.11 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=39.0
Q ss_pred ecceeEEeCC-ee--cCCHHHHHHHHHHCCCeEEEE-eCCCCCCHHHHHHHHHHcCCC
Q 019928 89 DCDGVIWKGD-KL--IDGVPETLDMLRSKGKRLVFV-TNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 89 DiDGTL~d~~-~~--~~~a~~aL~~L~~~G~~v~i~-Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+.+|+.+.+. .+ ++...+.++.+++.|+++.+. ||.++....+..+.+..+|++
T Consensus 73 ~~ggVtisGGGepl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~~gld 130 (404)
T TIGR03278 73 RDTKVTISGGGDVSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLIDNGVR 130 (404)
T ss_pred CCCEEEEECCcccccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHHcCCC
Confidence 3566655543 22 556789999999999999985 987766566777777777765
No 322
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=27.13 E-value=87 Score=23.19 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=35.3
Q ss_pred CcEEEEecceeEE-eCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIW-KGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~-d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.+++|+-++=. |+. ....-.+..+.+++.|..+.+.. ....+.+.+...|+.
T Consensus 41 ~~~lilD~~~v~~iDss-~~~~L~~~~~~~~~~~~~~~l~~-----~~~~~~~~l~~~g~~ 95 (107)
T cd07042 41 LKVVILDLSAVNFIDST-AAEALEELVKDLRKRGVELYLAG-----LNPQVRELLERAGLL 95 (107)
T ss_pred ceEEEEECCCCchhhHH-HHHHHHHHHHHHHHCCCEEEEec-----CCHHHHHHHHHcCcH
Confidence 3688999999643 322 11112456777788898887775 344677777888774
No 323
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=27.09 E-value=5e+02 Score=28.06 Aligned_cols=58 Identities=17% Similarity=0.322 Sum_probs=38.9
Q ss_pred cEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCc
Q 019928 84 ETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEE 147 (334)
Q Consensus 84 k~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~ 147 (334)
+..|.-+=| + -+..-+++.++++.+++.|+++..+|. -+.......-+++|+.-..++
T Consensus 572 ~LtFvGlVG-i--~DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed 629 (972)
T KOG0202|consen 572 DLTFVGLVG-I--LDPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDED 629 (972)
T ss_pred ceEEEEEee-c--cCCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCcc
Confidence 455554444 2 245567789999999999999999994 444444444477887554443
No 324
>PRK10494 hypothetical protein; Provisional
Probab=27.09 E-value=2.4e+02 Score=25.57 Aligned_cols=54 Identities=22% Similarity=0.266 Sum_probs=30.2
Q ss_pred HHHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEE
Q 019928 228 YKVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICM 307 (334)
Q Consensus 228 ~~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~ 307 (334)
.++.++....++.+..++++|...... .+.|..+.+...+..+|+++++++.
T Consensus 107 ~Rl~~a~~L~r~~~~~~ii~SGg~~~~----------------------------~~~sEA~~~~~~l~~lGVp~~~Ii~ 158 (259)
T PRK10494 107 PRLTEGIRLWRANPGAKLIFTGGAAKT----------------------------NTVSTAEVGARVAQSLGVPREDIIT 158 (259)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCC----------------------------CCCCHHHHHHHHHHHcCCCHHHeee
Confidence 456666666665556677766532100 0334556666666677776665555
Q ss_pred Ec
Q 019928 308 VG 309 (334)
Q Consensus 308 VG 309 (334)
-+
T Consensus 159 e~ 160 (259)
T PRK10494 159 LD 160 (259)
T ss_pred CC
Confidence 44
No 325
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=27.02 E-value=1.5e+02 Score=29.54 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=41.3
Q ss_pred cCcEEEEeccee----EEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 82 SVETFIFDCDGV----IWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 82 ~ik~viFDiDGT----L~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
....+.|=.+++ +.-.+.+.+++.++++.|++.|+.+.++| |.+.......-+.+|+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~lt---GD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLT---GDNVLTAKAIAKELGI 386 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEc---CCCHHHHHHHHHHcCc
Confidence 345555545554 44477888999999999999999999999 5555555544477776
No 326
>PF13756 Stimulus_sens_1: Stimulus-sensing domain
Probab=26.44 E-value=45 Score=26.11 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=16.1
Q ss_pred cCcEEEEecceeEE-eCCeec
Q 019928 82 SVETFIFDCDGVIW-KGDKLI 101 (334)
Q Consensus 82 ~ik~viFDiDGTL~-d~~~~~ 101 (334)
+.++-+||-||+|+ |+..+.
T Consensus 18 ~~RARlyd~dG~Ll~DSr~l~ 38 (112)
T PF13756_consen 18 RTRARLYDPDGNLLADSRVLY 38 (112)
T ss_pred CceEEEECCCCCEEeeccccc
Confidence 57799999999997 666553
No 327
>TIGR00343 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1. This protein had been believed to be a singlet oxygen resistance protein. Subsequent work showed that it is a protein of pyridoxine (vitamin B6) biosynthesis, and that pyridoxine quenches the highly toxic singlet form of oxygen produced by light in the presence of certain chemicals.
Probab=26.26 E-value=1.4e+02 Score=27.61 Aligned_cols=45 Identities=13% Similarity=0.093 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHhCCCCCcEE--EEc--cCchhHHHHHHHcCCcEEEEccccC
Q 019928 286 PSTFMMDYLANKFGIQKSQIC--MVG--DRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 286 P~~~~~~~~~~~lgi~~~evi--~VG--Ds~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
|..+.+..+.+..+++ ++ ++| .++ .|+....+.|++.|.|.++.|
T Consensus 184 ~~~elLkei~~~~~iP---VV~fAiGGI~TP-edAa~~melGAdGVaVGSaI~ 232 (287)
T TIGR00343 184 VPVELLLEVLKLGKLP---VVNFAAGGVATP-ADAALMMQLGADGVFVGSGIF 232 (287)
T ss_pred CCHHHHHHHHHhCCCC---EEEeccCCCCCH-HHHHHHHHcCCCEEEEhHHhh
Confidence 7778888888876653 66 888 678 999999999999999998864
No 328
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=26.11 E-value=2.2e+02 Score=26.61 Aligned_cols=42 Identities=10% Similarity=0.020 Sum_probs=31.7
Q ss_pred cCcEEEEecc-----e--eEEeCCeecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 82 SVETFIFDCD-----G--VIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 82 ~ik~viFDiD-----G--TL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
.+++|.+|+| | ...=..+.+|...+.++.|++.|+++++..+
T Consensus 39 P~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~ 87 (319)
T cd06591 39 PLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIW 87 (319)
T ss_pred CccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEec
Confidence 4778999986 3 3322344689999999999999999876553
No 329
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=25.30 E-value=1.6e+02 Score=27.06 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=32.0
Q ss_pred cCcEEEEecc-e-------------eEEeCCeecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 82 SVETFIFDCD-G-------------VIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 82 ~ik~viFDiD-G-------------TL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
..++|.+|+| - ...=..+.+|+..+.++.|+++|+++++..+
T Consensus 40 P~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~v~~v~ 95 (292)
T cd06595 40 PLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLKVTLNLH 95 (292)
T ss_pred CccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCEEEEEeC
Confidence 4778999986 1 2221345689999999999999999987775
No 330
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=24.96 E-value=82 Score=28.33 Aligned_cols=50 Identities=30% Similarity=0.386 Sum_probs=33.8
Q ss_pred eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCcCcEEecH
Q 019928 99 KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLTVTEEEIFASS 152 (334)
Q Consensus 99 ~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~~~~~~i~~~~ 152 (334)
....+..+++++|++.|..+.++||...|- ...+..+|+..-.+.++.|.
T Consensus 113 ~~~~~~~~~lq~lR~~g~~l~iisN~d~r~----~~~l~~~~l~~~fD~vv~S~ 162 (237)
T KOG3085|consen 113 KYLDGMQELLQKLRKKGTILGIISNFDDRL----RLLLLPLGLSAYFDFVVESC 162 (237)
T ss_pred eeccHHHHHHHHHHhCCeEEEEecCCcHHH----HHHhhccCHHHhhhhhhhhh
Confidence 335556799999999999999999844332 24457777764445555544
No 331
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=24.55 E-value=5.3e+02 Score=23.33 Aligned_cols=86 Identities=16% Similarity=0.114 Sum_probs=54.4
Q ss_pred CCCccEEEEEecCCCCHHHHHHHHHhH-HcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHH
Q 019928 211 DKDVGAVVVGFDRYFNYYKVQYGTLCI-RENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTF 289 (334)
Q Consensus 211 ~~~~~~vv~~~~~~~~~~~l~~~~~~l-~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~ 289 (334)
+++++.-+++.+....-+..+++...+ .++.--..|..+++. .-|-|.
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~pDf~i~isPN~-------------------------------a~PGP~ 77 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKKMLEEWKPDFVIVISPNP-------------------------------AAPGPK 77 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCC-------------------------------CCCCch
Confidence 345667778877777777777665555 232222233333333 345555
Q ss_pred HHHHHHHHhCCCCCcEEEEccCchh-HHHHHHHcCCcEEEEc
Q 019928 290 MMDYLANKFGIQKSQICMVGDRLDT-DILFGQNGGCKTLLVL 330 (334)
Q Consensus 290 ~~~~~~~~lgi~~~evi~VGDs~~~-DI~~a~~aG~~tv~V~ 330 (334)
.-+.+++.-|+ -|++|||.+.. +.+..++.|+.-|.|.
T Consensus 78 ~ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk 116 (277)
T PRK00994 78 KAREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVK 116 (277)
T ss_pred HHHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEe
Confidence 66667777677 69999999833 4477888898888774
No 332
>PRK04180 pyridoxal biosynthesis lyase PdxS; Provisional
Probab=24.46 E-value=1.8e+02 Score=26.91 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEE--EEc--cCchhHHHHHHHcCCcEEEEccccC
Q 019928 284 GKPSTFMMDYLANKFGIQKSQIC--MVG--DRLDTDILFGQNGGCKTLLVLSGKW 334 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi--~VG--Ds~~~DI~~a~~aG~~tv~V~tG~~ 334 (334)
-.|..+.+..+.+..+++ ++ ++| .++ .|+..+.+.|++.|.|.++.|
T Consensus 188 ~~~~~elL~ei~~~~~iP---VV~~AeGGI~TP-edaa~vme~GAdgVaVGSaI~ 238 (293)
T PRK04180 188 LQAPYELVKEVAELGRLP---VVNFAAGGIATP-ADAALMMQLGADGVFVGSGIF 238 (293)
T ss_pred cCCCHHHHHHHHHhCCCC---EEEEEeCCCCCH-HHHHHHHHhCCCEEEEcHHhh
Confidence 347788888888877664 66 889 578 999999999999999998864
No 333
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=23.77 E-value=3e+02 Score=28.91 Aligned_cols=81 Identities=11% Similarity=0.044 Sum_probs=46.4
Q ss_pred HHHHHHHhHHcCCCcEEEEecCCcccccccchhccccchHHHHhHhhcCCcccccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 019928 229 KVQYGTLCIRENPGCLFIATNRDAVTHLTDAQEWAGGGSMVGAFVGSTQREPLVVGKPSTFMMDYLANKFGIQKSQICMV 308 (334)
Q Consensus 229 ~l~~~~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~lgi~~~evi~V 308 (334)
+..+++..+++. |+..+.-.-|.. .-+..+....|.+... ..=.|+-=..+.+.+.-.-+-+.|+
T Consensus 449 ~~~eai~~Lr~~-GI~vvMiTGDn~-------------~TA~aIA~elGId~v~-A~~~PedK~~iV~~lQ~~G~~VaMt 513 (679)
T PRK01122 449 GIKERFAELRKM-GIKTVMITGDNP-------------LTAAAIAAEAGVDDFL-AEATPEDKLALIRQEQAEGRLVAMT 513 (679)
T ss_pred hHHHHHHHHHHC-CCeEEEECCCCH-------------HHHHHHHHHcCCcEEE-ccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 456667777653 555444333332 1255555556655422 2223433333444443333569999
Q ss_pred ccCchhHHHHHHHcCCc
Q 019928 309 GDRLDTDILFGQNGGCK 325 (334)
Q Consensus 309 GDs~~~DI~~a~~aG~~ 325 (334)
||.. ||..+.++|.+.
T Consensus 514 GDGv-NDAPALa~ADVG 529 (679)
T PRK01122 514 GDGT-NDAPALAQADVG 529 (679)
T ss_pred CCCc-chHHHHHhCCEe
Confidence 9999 999999999753
No 334
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=23.06 E-value=1.2e+02 Score=22.50 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=20.2
Q ss_pred CCCCH---HHHHHHHHHhCCCCCcEEEEc
Q 019928 284 GKPST---FMMDYLANKFGIQKSQICMVG 309 (334)
Q Consensus 284 gKP~~---~~~~~~~~~lgi~~~evi~VG 309 (334)
|+|.| ++-..+++.++++++.+++.+
T Consensus 9 g~~Tpsr~ei~~klA~~~~~~~~~ivv~~ 37 (84)
T PF01282_consen 9 GKPTPSRKEIREKLAAMLNVDPDLIVVFG 37 (84)
T ss_dssp SSSS--HHHHHHHHHHHHTSTGCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHhCCCCCeEEEec
Confidence 55555 677889999999999888876
No 335
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=22.72 E-value=91 Score=27.00 Aligned_cols=38 Identities=16% Similarity=0.342 Sum_probs=29.4
Q ss_pred EEEecceeEEe--------CCeecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 86 FIFDCDGVIWK--------GDKLIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 86 viFDiDGTL~d--------~~~~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
.+=-+.|-+|. ...++|+|.++|++-++.|+++++.|.
T Consensus 82 ~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSS 127 (229)
T COG4229 82 PLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSS 127 (229)
T ss_pred hHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcC
Confidence 33345566654 236799999999999999999999995
No 336
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=22.31 E-value=6.4e+02 Score=27.30 Aligned_cols=55 Identities=25% Similarity=0.398 Sum_probs=33.9
Q ss_pred cEEEEecceeEEeCC------------eecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Q 019928 84 ETFIFDCDGVIWKGD------------KLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGL 141 (334)
Q Consensus 84 k~viFDiDGTL~d~~------------~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl 141 (334)
+.+.||+|-.=...+ ..-..+.+++.+.++.|+++..+|. ..+.......++.|+
T Consensus 563 ~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTg---dhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 563 RGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKSVGI 629 (1019)
T ss_pred CceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEec---Cccchhhhhhhheee
Confidence 367788865443322 1123346899999999999999994 444333333355554
No 337
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=22.12 E-value=71 Score=26.35 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=23.6
Q ss_pred EecceeEEeCCeecC-CHHHHHHHHHHCCCeEEEEe
Q 019928 88 FDCDGVIWKGDKLID-GVPETLDMLRSKGKRLVFVT 122 (334)
Q Consensus 88 FDiDGTL~d~~~~~~-~a~~aL~~L~~~G~~v~i~T 122 (334)
-|=||||+-...... ++..+.+..++.++++.++.
T Consensus 62 ~DsDgTlI~~~g~l~GGt~lT~~~a~~~~KP~l~i~ 97 (145)
T PF12694_consen 62 RDSDGTLIFTRGELTGGTALTVEFARKHGKPCLHID 97 (145)
T ss_dssp HTSSEEEEEESSS--HHHHHHHHHHHHTT--EEEET
T ss_pred hhcCeEEEEecCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 588999986544333 46778888899999988773
No 338
>PRK15108 biotin synthase; Provisional
Probab=21.81 E-value=6.9e+02 Score=23.63 Aligned_cols=38 Identities=16% Similarity=0.222 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 102 DGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 102 ~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
+...+.++.+++.++.+. +|| +..+ .+..+.|+..|++
T Consensus 111 e~i~~~i~~ik~~~i~v~-~s~-G~ls-~e~l~~LkeAGld 148 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETC-MTL-GTLS-ESQAQRLANAGLD 148 (345)
T ss_pred HHHHHHHHHHHhCCCEEE-EeC-CcCC-HHHHHHHHHcCCC
Confidence 335577888888887653 665 3444 7778888999997
No 339
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=21.64 E-value=2.2e+02 Score=23.92 Aligned_cols=59 Identities=14% Similarity=0.130 Sum_probs=35.7
Q ss_pred HHHhHhhcCCcccccCCCCHHHHHHHHHHh---CCCCCcEEEEccCchhHHHHHHHcCCcEEEEcccc
Q 019928 269 VGAFVGSTQREPLVVGKPSTFMMDYLANKF---GIQKSQICMVGDRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 269 ~~~i~~~~~~~~~~~gKP~~~~~~~~~~~l---gi~~~evi~VGDs~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
...+....+.+...+.--+++-+..+++++ |+ -++||+.. . .+.|++.|+.++++.+|.
T Consensus 92 ~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~G~----~viVGg~~-~-~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 92 LESIEELLGVDIKIYPYDSEEEIEAAIKQAKAEGV----DVIVGGGV-V-CRLARKLGLPGVLIESGE 153 (176)
T ss_dssp HHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHTT------EEEESHH-H-HHHHHHTTSEEEESS--H
T ss_pred HHHHHHHhCCceEEEEECCHHHHHHHHHHHHHcCC----cEEECCHH-H-HHHHHHcCCcEEEEEecH
Confidence 344445555554333334455555555554 54 36788887 5 788999999999998874
No 340
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=21.42 E-value=1.2e+02 Score=24.12 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCCcEEEEccCchhHHHHHH
Q 019928 288 TFMMDYLANKFGIQKSQICMVGDRLDTDILFGQ 320 (334)
Q Consensus 288 ~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~ 320 (334)
...+...++.+|.+.....++.|+. .+|..+-
T Consensus 20 ~~~l~~~l~~~G~~~~~~~~v~Dd~-~~I~~~l 51 (135)
T smart00852 20 GPALAELLTELGIEVTRYVIVPDDK-EAIKEAL 51 (135)
T ss_pred HHHHHHHHHHCCCeEEEEEEeCCCH-HHHHHHH
Confidence 4556778889999888888889998 7776664
No 341
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=21.39 E-value=1.2e+02 Score=21.95 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEccCchhHHHHHHHcC
Q 019928 284 GKPSTFMMDYLANKFGIQKSQICMVGDRLDTDILFGQNGG 323 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi~~~evi~VGDs~~~DI~~a~~aG 323 (334)
.-|....+.+++|.+++++..+..|-++- .+|--++.||
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTndG-vGINP~qtAG 63 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITNDG-IGINPAQTAG 63 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecCc-cccChhhccc
Confidence 44666778889999999999998888877 8888888887
No 342
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=21.27 E-value=57 Score=32.69 Aligned_cols=21 Identities=29% Similarity=0.534 Sum_probs=17.1
Q ss_pred CcEEEEecceeEEeCCeecCC
Q 019928 83 VETFIFDCDGVIWKGDKLIDG 103 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~ 103 (334)
-+++++|+||||+.+...+|.
T Consensus 50 ~~t~v~d~~g~Ll~s~s~Fpy 70 (525)
T PLN02588 50 NHTLIFNVEGALLKSNSLFPY 70 (525)
T ss_pred cceEEEecccceeccCCCCcc
Confidence 457999999999998776554
No 343
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=21.19 E-value=1e+02 Score=31.40 Aligned_cols=55 Identities=20% Similarity=0.297 Sum_probs=38.2
Q ss_pred CcEEEEecceeEEeCCeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Q 019928 83 VETFIFDCDGVIWKGDKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKFETLGLT 142 (334)
Q Consensus 83 ik~viFDiDGTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l~~lGl~ 142 (334)
.+.+++|+.++-.-+......-.+..+++++.|+.+.++. ....+.+.++..|+.
T Consensus 494 ~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~-----~~~~v~~~l~~~gl~ 548 (563)
T TIGR00815 494 LQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLAN-----PNKAVRSTLKRGGLV 548 (563)
T ss_pred ceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEec-----CChHHHHHHHHCCch
Confidence 5899999999764322222223466677788999988777 345677778888874
No 344
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=21.04 E-value=2.8e+02 Score=28.50 Aligned_cols=54 Identities=22% Similarity=0.328 Sum_probs=37.4
Q ss_pred EEEEecceeEEeC--CeecCCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCC
Q 019928 85 TFIFDCDGVIWKG--DKLIDGVPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGL 141 (334)
Q Consensus 85 ~viFDiDGTL~d~--~~~~~~a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl 141 (334)
..++|+||-+++- .+-+. -.+.+....+.|.|++++|.-+ +..+..+++ .++|-
T Consensus 257 iAvldldGevl~~~S~r~~~-~~eVve~I~~lG~PvvVAtDVt--p~P~~V~KiAasf~A 313 (652)
T COG2433 257 IAVLDLDGEVLDLESRRGID-RSEVVEFISELGKPVVVATDVT--PAPETVKKIAASFNA 313 (652)
T ss_pred EEEEecCCcEEeeeccccCC-HHHHHHHHHHcCCceEEEccCC--CChHHHHHHHHHcCC
Confidence 5789999999983 33322 4577788889999999999754 333444554 55555
No 345
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=20.94 E-value=3.7e+02 Score=23.91 Aligned_cols=69 Identities=19% Similarity=0.320 Sum_probs=48.6
Q ss_pred ccHHHHhhcCcEEEEecceeEEeCCeecCC------HHHHHHHHHHCCCeEEEEeCCCCCC--HHH---HHHHHHHcCCC
Q 019928 74 KNADELIDSVETFIFDCDGVIWKGDKLIDG------VPETLDMLRSKGKRLVFVTNNSTKS--RKQ---YGKKFETLGLT 142 (334)
Q Consensus 74 ~~~~~~~~~ik~viFDiDGTL~d~~~~~~~------a~~aL~~L~~~G~~v~i~Tn~sgrs--~~~---~~~~l~~lGl~ 142 (334)
....+.+.+.+.++..+++++.+....++. -.+.++.|+..|+.++-+.||-... .+. ..+.|++.|+.
T Consensus 28 ~~v~~~l~~aD~~~~NlE~~v~~~~~~~~~~~~f~~~~~~~~~L~~~G~d~vslANNH~~D~G~~gl~~Tl~~L~~~gi~ 107 (250)
T PF09587_consen 28 EDVKPLLQSADLVVANLETPVTDSGQPASGYPHFNAPPEILDALKDAGFDVVSLANNHIFDYGEEGLLDTLEALDKAGIP 107 (250)
T ss_pred HHHHHHHhhCCEEEEEeeecCcCCCCcCCCcceecCCHHHHHHHHHcCCCEEEecCCCCccccHHHHHHHHHHHHHCCCc
Confidence 445667788899999999999876544332 3578999999999998888765444 233 34445666664
No 346
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=20.74 E-value=3.9e+02 Score=23.28 Aligned_cols=45 Identities=11% Similarity=0.182 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHhCC-CCCcEEEEccCchhHHHHHHHcCCcEEEE
Q 019928 284 GKPSTFMMDYLANKFGI-QKSQICMVGDRLDTDILFGQNGGCKTLLV 329 (334)
Q Consensus 284 gKP~~~~~~~~~~~lgi-~~~evi~VGDs~~~DI~~a~~aG~~tv~V 329 (334)
++|++.....+.+ +-+ +..+++.+|.....|.....+.|+.++.|
T Consensus 17 ~~p~~~l~~~~~~-l~~~~~~rvLd~GCG~G~da~~LA~~G~~V~gv 62 (213)
T TIGR03840 17 SEVNPLLVKHWPA-LGLPAGARVFVPLCGKSLDLAWLAEQGHRVLGV 62 (213)
T ss_pred CCCCHHHHHHHHh-hCCCCCCeEEEeCCCchhHHHHHHhCCCeEEEE
Confidence 6888877775544 323 44699999999999999999999998876
No 347
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=20.69 E-value=3.5e+02 Score=25.15 Aligned_cols=42 Identities=19% Similarity=0.237 Sum_probs=32.1
Q ss_pred cCcEEEEecc-----------eeEEeCCeecCCHHHHHHHHHHCCCeEEEEeC
Q 019928 82 SVETFIFDCD-----------GVIWKGDKLIDGVPETLDMLRSKGKRLVFVTN 123 (334)
Q Consensus 82 ~ik~viFDiD-----------GTL~d~~~~~~~a~~aL~~L~~~G~~v~i~Tn 123 (334)
.+++|.+|+| |...=..+.+|.-.+.++.|++.|++++...+
T Consensus 39 P~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~v~ 91 (317)
T cd06598 39 PLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGVKTIVITE 91 (317)
T ss_pred CceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCCcEEEEEc
Confidence 4678999975 23322355689999999999999999887665
No 348
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=20.61 E-value=1.3e+02 Score=28.57 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=38.2
Q ss_pred EEEEecceeEEe--CCeecCC-HHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCC
Q 019928 85 TFIFDCDGVIWK--GDKLIDG-VPETLDMLRSKGKRLVFVTNNSTKSRKQYGKKF-ETLGLT 142 (334)
Q Consensus 85 ~viFDiDGTL~d--~~~~~~~-a~~aL~~L~~~G~~v~i~Tn~sgrs~~~~~~~l-~~lGl~ 142 (334)
.|+=|+|||.+. -+.+-.. -..-+++.++..-+++++||..-..++.+.+.. +.+|-.
T Consensus 4 LivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~~~F~VLTnGEHeG~RGVNriVE~Alg~~ 65 (381)
T PF09506_consen 4 LIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLEGHFYVLTNGEHEGRRGVNRIVERALGDT 65 (381)
T ss_pred eEEecCCccchhhccCccccccCHHHHHHHHHhcCcEEEEeCCcccCccchHHHHHHHcCCc
Confidence 578899999875 1111111 123455556666679999997777788888887 557654
No 349
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=20.45 E-value=84 Score=28.47 Aligned_cols=42 Identities=24% Similarity=0.191 Sum_probs=32.2
Q ss_pred CCCCH----HHHHHHHHHhCCCC--CcEEEEccCchhHHHHHHHcCCc
Q 019928 284 GKPST----FMMDYLANKFGIQK--SQICMVGDRLDTDILFGQNGGCK 325 (334)
Q Consensus 284 gKP~~----~~~~~~~~~lgi~~--~evi~VGDs~~~DI~~a~~aG~~ 325 (334)
-||+| ++|+.-++.+|++| +++-+|+|+=.+--.+|--.|+.
T Consensus 80 iKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWE 127 (279)
T cd00733 80 IKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWE 127 (279)
T ss_pred ECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccE
Confidence 67777 67888899999975 46999999876666676666643
No 350
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa. Together with PdxT, PdxS forms the PLP synthase, a heteromeric glutamine amidotransferase (GATase), whereby PdxT produces ammonia from glutamine and PdxS combines ammonia with five- and three-carbon phosphosugars to form PLP. PLP is the biologically active form of vitamin B6, an essential cofactor in many biochemical processes. PdxS subunits form two hexameric rings.
Probab=20.20 E-value=2.6e+02 Score=25.86 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHHHhCCCCCcEE--EEc--cCchhHHHHHHHcCCcEEEEcccc
Q 019928 285 KPSTFMMDYLANKFGIQKSQIC--MVG--DRLDTDILFGQNGGCKTLLVLSGK 333 (334)
Q Consensus 285 KP~~~~~~~~~~~lgi~~~evi--~VG--Ds~~~DI~~a~~aG~~tv~V~tG~ 333 (334)
.|..+.+..+.+..+++ ++ ++| .++ .|+.-+.+.|.+.|.|.++.
T Consensus 180 ~~d~elLk~l~~~~~iP---VV~iAeGGI~Tp-ena~~v~e~GAdgVaVGSAI 228 (283)
T cd04727 180 QAPYELVKETAKLGRLP---VVNFAAGGVATP-ADAALMMQLGADGVFVGSGI 228 (283)
T ss_pred CCCHHHHHHHHHhcCCC---eEEEEeCCCCCH-HHHHHHHHcCCCEEEEcHHh
Confidence 47778888888887764 65 899 678 99999999999999998875
Done!