Query 019931
Match_columns 334
No_of_seqs 322 out of 2233
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:40:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019931.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019931hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02955 8-amino-7-oxononanoat 100.0 6.5E-64 1.4E-68 494.7 30.0 324 5-334 4-331 (476)
2 COG0156 BioF 7-keto-8-aminopel 100.0 1.4E-55 2.9E-60 426.6 24.8 246 5-334 1-254 (388)
3 KOG1359 Glycine C-acetyltransf 100.0 1E-50 2.2E-55 368.9 10.7 263 22-334 8-276 (417)
4 KOG1360 5-aminolevulinate synt 100.0 5.9E-45 1.3E-49 342.3 17.7 210 109-334 171-385 (570)
5 PRK13393 5-aminolevulinate syn 100.0 1E-40 2.3E-45 327.8 26.8 254 5-334 1-259 (406)
6 TIGR01821 5aminolev_synth 5-am 100.0 1.2E-40 2.7E-45 326.6 26.7 211 108-334 44-259 (402)
7 PRK09064 5-aminolevulinate syn 100.0 5.7E-40 1.2E-44 322.3 27.2 211 108-334 45-260 (407)
8 PRK13392 5-aminolevulinate syn 100.0 7.4E-38 1.6E-42 307.8 25.8 255 4-334 1-260 (410)
9 PLN03227 serine palmitoyltrans 100.0 2.4E-38 5.3E-43 310.1 21.6 205 112-334 1-222 (392)
10 PLN02822 serine palmitoyltrans 100.0 6.2E-38 1.4E-42 314.5 23.4 211 106-334 106-328 (481)
11 PLN02483 serine palmitoyltrans 100.0 7.6E-37 1.7E-41 307.2 26.8 209 108-334 99-323 (489)
12 TIGR01822 2am3keto_CoA 2-amino 100.0 8.7E-36 1.9E-40 290.7 26.8 210 107-334 36-253 (393)
13 KOG1357 Serine palmitoyltransf 100.0 3.8E-37 8.2E-42 293.7 15.2 208 109-334 136-359 (519)
14 PRK07179 hypothetical protein; 100.0 2.4E-34 5.1E-39 282.7 24.1 208 107-334 52-263 (407)
15 PRK05937 8-amino-7-oxononanoat 100.0 3.3E-34 7.1E-39 278.6 22.7 206 109-333 4-223 (370)
16 PRK05958 8-amino-7-oxononanoat 100.0 6.6E-32 1.4E-36 261.6 26.7 246 5-334 1-251 (385)
17 KOG1358 Serine palmitoyltransf 100.0 2.1E-33 4.6E-38 264.1 14.8 211 106-334 91-316 (467)
18 PRK06939 2-amino-3-ketobutyrat 100.0 1.8E-29 3.8E-34 245.8 27.0 211 106-334 39-257 (397)
19 cd06454 KBL_like KBL_like; thi 100.0 5.7E-30 1.2E-34 244.9 21.7 207 109-334 1-214 (349)
20 TIGR01825 gly_Cac_T_rel pyrido 100.0 3.2E-29 6.9E-34 243.7 25.4 209 108-334 32-245 (385)
21 TIGR00858 bioF 8-amino-7-oxono 100.0 1.1E-28 2.3E-33 236.6 23.7 211 106-334 13-229 (360)
22 PRK07505 hypothetical protein; 100.0 8.2E-28 1.8E-32 236.1 22.2 215 104-333 41-262 (402)
23 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.7E-27 3.7E-32 229.8 19.5 180 115-334 25-217 (346)
24 PRK13034 serine hydroxymethylt 99.9 1E-26 2.2E-31 229.7 18.2 193 113-334 33-244 (416)
25 TIGR03246 arg_catab_astC succi 99.9 2.1E-26 4.6E-31 226.0 19.9 205 104-325 30-251 (397)
26 PLN03226 serine hydroxymethylt 99.9 2.4E-26 5.2E-31 230.1 15.2 177 133-334 60-259 (475)
27 COG4992 ArgD Ornithine/acetylo 99.9 5.5E-26 1.2E-30 217.8 16.4 209 104-332 37-266 (404)
28 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 5.1E-25 1.1E-29 214.1 20.9 184 125-334 21-222 (370)
29 PRK03715 argD acetylornithine 99.9 1.3E-24 2.9E-29 213.2 19.4 205 104-326 31-252 (395)
30 PRK05093 argD bifunctional N-s 99.9 1.8E-24 3.9E-29 212.6 20.2 213 104-333 35-266 (403)
31 TIGR01885 Orn_aminotrans ornit 99.9 4.4E-24 9.5E-29 209.6 20.4 209 105-326 33-259 (401)
32 PRK12381 bifunctional succinyl 99.9 3.1E-24 6.7E-29 211.3 18.9 205 104-325 34-255 (406)
33 cd00610 OAT_like Acetyl ornith 99.9 6.1E-24 1.3E-28 208.2 20.3 203 104-326 31-264 (413)
34 PRK02936 argD acetylornithine 99.9 7.3E-24 1.6E-28 206.0 20.1 208 104-334 24-250 (377)
35 PRK04073 rocD ornithine--oxo-a 99.9 1E-23 2.2E-28 206.8 20.9 215 104-333 35-269 (396)
36 PRK01278 argD acetylornithine 99.9 2.8E-23 6.1E-28 202.9 19.3 213 104-333 26-257 (389)
37 PRK03244 argD acetylornithine 99.9 3.2E-23 6.9E-28 203.0 19.6 205 104-332 38-265 (398)
38 PRK00854 rocD ornithine--oxo-a 99.9 4.3E-23 9.2E-28 202.3 20.0 215 104-333 36-270 (401)
39 PRK12403 putative aminotransfe 99.9 6E-23 1.3E-27 205.2 20.3 218 103-332 48-305 (460)
40 PTZ00125 ornithine aminotransf 99.9 7.7E-23 1.7E-27 200.2 19.8 216 104-333 26-261 (400)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.3E-22 2.9E-27 198.3 21.4 199 109-334 18-234 (387)
42 PRK08117 4-aminobutyrate amino 99.9 1E-22 2.2E-27 202.1 19.3 204 104-326 38-280 (433)
43 PLN02760 4-aminobutyrate:pyruv 99.9 1.2E-22 2.5E-27 204.9 19.9 211 104-326 84-333 (504)
44 COG0112 GlyA Glycine/serine hy 99.9 1.1E-23 2.4E-28 199.9 9.9 216 9-334 8-242 (413)
45 PRK13580 serine hydroxymethylt 99.9 5E-23 1.1E-27 204.5 14.1 196 132-334 74-299 (493)
46 PLN02624 ornithine-delta-amino 99.9 5.3E-22 1.1E-26 199.1 21.0 212 103-326 69-297 (474)
47 cd00614 CGS_like CGS_like: Cys 99.9 5.1E-22 1.1E-26 193.2 19.5 167 142-334 32-202 (369)
48 COG0160 GabT 4-aminobutyrate a 99.9 1.3E-21 2.8E-26 192.1 19.2 205 103-326 50-295 (447)
49 PRK00062 glutamate-1-semialdeh 99.9 1.3E-21 2.9E-26 193.8 18.6 200 104-326 45-269 (426)
50 TIGR03372 putres_am_tran putre 99.9 2.3E-21 5.1E-26 192.6 19.9 206 103-325 69-296 (442)
51 PRK11522 putrescine--2-oxoglut 99.9 2.2E-21 4.8E-26 193.7 19.0 214 103-333 76-315 (459)
52 PRK08133 O-succinylhomoserine 99.9 3.9E-21 8.5E-26 188.4 19.8 160 149-334 60-223 (390)
53 TIGR00707 argD acetylornithine 99.9 6.3E-21 1.4E-25 185.0 20.5 213 104-334 22-253 (379)
54 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 8.6E-21 1.9E-25 183.5 20.0 185 124-334 13-215 (361)
55 PRK02627 acetylornithine amino 99.9 1.4E-20 3E-25 183.8 20.5 212 104-333 34-264 (396)
56 PRK04260 acetylornithine amino 99.9 7.2E-21 1.6E-25 185.2 18.0 204 104-333 24-247 (375)
57 PRK00615 glutamate-1-semialdeh 99.9 8.5E-21 1.8E-25 188.2 18.5 207 104-333 48-282 (433)
58 PRK06062 hypothetical protein; 99.9 1.3E-20 2.8E-25 188.0 19.9 210 103-332 47-297 (451)
59 PRK06082 4-aminobutyrate amino 99.9 1.5E-20 3.4E-25 187.8 20.0 203 103-326 66-301 (459)
60 TIGR01324 cysta_beta_ly_B cyst 99.9 1E-20 2.2E-25 184.7 17.8 159 149-334 49-212 (377)
61 PRK07812 O-acetylhomoserine am 99.9 1.9E-20 4.1E-25 185.8 19.7 158 149-332 68-226 (436)
62 PRK07810 O-succinylhomoserine 99.9 2.3E-20 4.9E-25 183.7 19.9 160 149-334 69-232 (403)
63 PLN02482 glutamate-1-semialdeh 99.9 2.6E-20 5.7E-25 186.5 20.5 205 103-330 93-325 (474)
64 PRK12389 glutamate-1-semialdeh 99.9 3.4E-20 7.4E-25 183.9 20.9 206 103-331 47-280 (428)
65 PRK09264 diaminobutyrate--2-ox 99.9 3E-20 6.5E-25 184.1 20.4 210 104-333 34-281 (425)
66 PF00155 Aminotran_1_2: Aminot 99.9 7.5E-21 1.6E-25 183.2 15.7 208 110-334 2-236 (363)
67 TIGR01328 met_gam_lyase methio 99.9 2.5E-20 5.4E-25 182.8 19.1 160 149-334 58-221 (391)
68 PRK07986 adenosylmethionine--8 99.9 2.1E-20 4.6E-25 185.2 17.9 212 103-330 37-280 (428)
69 PRK08593 4-aminobutyrate amino 99.9 4.9E-20 1.1E-24 183.6 20.6 211 104-333 37-289 (445)
70 COG0436 Aspartate/tyrosine/aro 99.9 8.6E-20 1.9E-24 179.0 21.9 203 109-334 28-251 (393)
71 PRK06209 glutamate-1-semialdeh 99.9 1.2E-20 2.6E-25 187.3 16.0 209 103-333 42-264 (431)
72 PLN02271 serine hydroxymethylt 99.8 1.3E-20 2.7E-25 188.6 15.4 178 132-333 173-373 (586)
73 PRK06234 methionine gamma-lyas 99.8 4.4E-20 9.5E-25 181.6 18.6 160 149-334 63-228 (400)
74 PRK05964 adenosylmethionine--8 99.8 7E-20 1.5E-24 181.3 19.9 209 104-325 37-272 (423)
75 PRK06767 methionine gamma-lyas 99.8 4.4E-20 9.5E-25 180.8 18.3 160 149-334 60-223 (386)
76 PLN02242 methionine gamma-lyas 99.8 3.3E-20 7.2E-25 183.3 17.3 160 149-334 75-239 (418)
77 cd06502 TA_like Low-specificit 99.8 2.1E-20 4.7E-25 178.1 15.4 194 113-333 1-208 (338)
78 PRK04013 argD acetylornithine/ 99.8 8.8E-20 1.9E-24 177.2 19.8 199 104-326 19-234 (364)
79 PRK06173 adenosylmethionine--8 99.8 4.2E-20 9.1E-25 183.2 17.7 213 104-331 39-283 (429)
80 PRK08249 cystathionine gamma-s 99.8 4.7E-20 1E-24 181.2 17.9 160 149-334 63-226 (398)
81 PRK13360 omega amino acid--pyr 99.8 6.5E-20 1.4E-24 182.5 18.9 210 103-325 40-287 (442)
82 PRK08574 cystathionine gamma-s 99.8 6.2E-20 1.3E-24 179.7 18.1 158 149-333 52-213 (385)
83 PLN00144 acetylornithine trans 99.8 1.4E-19 3E-24 177.0 19.9 215 104-333 10-249 (382)
84 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.3E-19 2.8E-24 177.1 19.5 160 149-334 53-216 (380)
85 PRK06149 hypothetical protein; 99.8 7.4E-20 1.6E-24 197.5 19.3 203 103-326 579-818 (972)
86 PRK05939 hypothetical protein; 99.8 1.8E-19 3.9E-24 177.0 20.1 155 149-330 46-200 (397)
87 PRK06105 aminotransferase; Pro 99.8 1.3E-19 2.9E-24 181.1 19.5 211 104-326 43-291 (460)
88 PRK08114 cystathionine beta-ly 99.8 1.2E-19 2.6E-24 177.6 18.1 159 149-333 61-225 (395)
89 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.8E-19 4E-24 178.1 19.5 154 149-328 56-209 (418)
90 PRK06541 hypothetical protein; 99.8 1.8E-19 3.9E-24 180.2 19.5 216 104-332 47-304 (460)
91 COG0001 HemL Glutamate-1-semia 99.8 2.4E-19 5.1E-24 173.8 19.3 202 103-326 47-272 (432)
92 TIGR00713 hemL glutamate-1-sem 99.8 1.9E-19 4.1E-24 178.0 19.1 208 104-333 43-276 (423)
93 PRK07504 O-succinylhomoserine 99.8 1.3E-19 2.7E-24 178.2 17.6 160 149-334 64-227 (398)
94 PRK07811 cystathionine gamma-s 99.8 1.8E-19 3.9E-24 176.6 18.5 159 149-333 60-222 (388)
95 TIGR02407 ectoine_ectB diamino 99.8 3.4E-19 7.4E-24 175.9 20.4 205 104-328 30-269 (412)
96 PRK08360 4-aminobutyrate amino 99.8 4.7E-19 1E-23 176.4 21.2 211 104-333 36-286 (443)
97 PRK07495 4-aminobutyrate amino 99.8 8.9E-19 1.9E-23 173.6 21.5 211 104-333 35-280 (425)
98 PRK07480 putative aminotransfe 99.8 4.5E-19 9.8E-24 177.1 19.5 218 103-332 44-302 (456)
99 PRK09221 beta alanine--pyruvat 99.8 4.4E-19 9.5E-24 176.7 19.2 209 104-325 44-290 (445)
100 PRK09028 cystathionine beta-ly 99.8 5.4E-19 1.2E-23 173.2 19.5 158 149-332 60-221 (394)
101 PRK05994 O-acetylhomoserine am 99.8 3.6E-19 7.8E-24 176.5 18.4 158 149-332 62-223 (427)
102 KOG0257 Kynurenine aminotransf 99.8 3.3E-19 7.1E-24 170.4 17.3 191 122-334 43-260 (420)
103 PRK08861 cystathionine gamma-s 99.8 5.5E-19 1.2E-23 173.0 19.4 159 149-333 52-214 (388)
104 PRK09082 methionine aminotrans 99.8 8.5E-19 1.8E-23 171.3 20.6 203 109-334 30-251 (386)
105 PRK06702 O-acetylhomoserine am 99.8 3.4E-19 7.4E-24 176.3 17.9 158 149-332 60-222 (432)
106 PRK05639 4-aminobutyrate amino 99.8 8E-19 1.7E-23 175.3 20.7 205 103-326 47-295 (457)
107 PRK07503 methionine gamma-lyas 99.8 3.4E-19 7.5E-24 175.4 17.8 159 149-333 64-226 (403)
108 PRK08134 O-acetylhomoserine am 99.8 5.4E-19 1.2E-23 175.4 19.2 154 149-328 63-216 (433)
109 PRK06084 O-acetylhomoserine am 99.8 3E-19 6.5E-24 176.9 17.4 159 149-333 57-219 (425)
110 PRK06777 4-aminobutyrate amino 99.8 9.7E-19 2.1E-23 173.2 20.8 203 104-325 35-270 (421)
111 TIGR01329 cysta_beta_ly_E cyst 99.8 6.3E-19 1.4E-23 172.2 19.1 157 150-333 47-207 (378)
112 PRK05965 hypothetical protein; 99.8 6.5E-19 1.4E-23 176.1 19.5 211 103-325 40-287 (459)
113 PRK07482 hypothetical protein; 99.8 6.9E-19 1.5E-23 176.0 19.5 210 104-325 45-292 (461)
114 PRK05769 4-aminobutyrate amino 99.8 1.3E-18 2.8E-23 173.2 21.3 212 103-333 48-303 (441)
115 PTZ00094 serine hydroxymethylt 99.8 1.6E-19 3.4E-24 180.3 14.7 185 125-333 47-257 (452)
116 PRK06058 4-aminobutyrate amino 99.8 8.4E-19 1.8E-23 174.7 19.3 202 103-325 50-291 (443)
117 PRK08247 cystathionine gamma-s 99.8 7.3E-19 1.6E-23 171.0 18.3 158 149-333 51-212 (366)
118 PRK09792 4-aminobutyrate trans 99.8 1.5E-18 3.2E-23 171.8 20.4 204 104-326 35-271 (421)
119 PF00464 SHMT: Serine hydroxym 99.8 4.8E-20 1.1E-24 179.5 9.5 177 133-334 46-245 (399)
120 PRK08248 O-acetylhomoserine am 99.8 7.6E-19 1.7E-23 174.3 18.3 159 149-333 63-225 (431)
121 PRK07050 cystathionine beta-ly 99.8 9.2E-19 2E-23 171.9 18.6 159 149-333 64-226 (394)
122 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.5E-18 3.2E-23 169.6 19.8 159 149-333 54-217 (386)
123 PLN02509 cystathionine beta-ly 99.8 8.3E-19 1.8E-23 175.0 18.3 157 150-333 133-293 (464)
124 PRK06460 hypothetical protein; 99.8 1E-18 2.2E-23 170.6 18.4 156 149-334 44-207 (376)
125 TIGR00508 bioA adenosylmethion 99.8 5.2E-19 1.1E-23 175.4 16.6 212 104-330 40-283 (427)
126 PRK05968 hypothetical protein; 99.8 1.4E-18 2.9E-23 170.4 19.1 160 148-334 61-224 (389)
127 PRK06943 adenosylmethionine--8 99.8 1.1E-18 2.3E-23 174.3 18.4 209 104-325 49-294 (453)
128 PF00202 Aminotran_3: Aminotra 99.8 1.2E-18 2.7E-23 167.8 17.8 210 104-326 11-250 (339)
129 PRK07046 aminotransferase; Val 99.8 2.7E-18 5.9E-23 171.4 20.8 198 104-326 70-289 (453)
130 PRK04612 argD acetylornithine 99.8 3.1E-18 6.7E-23 168.9 20.5 208 104-326 35-260 (408)
131 PRK06938 diaminobutyrate--2-ox 99.8 2E-18 4.3E-23 172.8 19.4 205 103-326 57-304 (464)
132 TIGR00699 GABAtrns_euk 4-amino 99.8 9.4E-19 2E-23 174.6 16.9 215 104-326 53-326 (464)
133 PLN02721 threonine aldolase 99.8 1.1E-18 2.4E-23 167.3 16.6 199 109-333 5-220 (353)
134 PRK06108 aspartate aminotransf 99.8 7E-18 1.5E-22 163.9 22.2 203 109-334 24-247 (382)
135 PRK07678 aminotransferase; Val 99.8 2.3E-18 4.9E-23 171.9 18.9 209 104-326 42-286 (451)
136 PRK12414 putative aminotransfe 99.8 7.4E-18 1.6E-22 164.6 22.0 203 109-334 29-250 (384)
137 PRK05613 O-acetylhomoserine am 99.8 2.8E-18 6.1E-23 170.4 19.2 159 149-333 68-231 (437)
138 TIGR00709 dat 2,4-diaminobutyr 99.8 5.3E-18 1.2E-22 168.9 21.2 205 103-326 33-279 (442)
139 PRK07030 adenosylmethionine--8 99.8 2.4E-18 5.2E-23 172.3 18.6 209 104-325 42-287 (466)
140 TIGR00700 GABAtrnsam 4-aminobu 99.8 5.3E-18 1.1E-22 167.8 20.9 203 104-325 28-269 (420)
141 PRK06916 adenosylmethionine--8 99.8 2E-18 4.4E-23 172.6 18.1 209 104-325 51-296 (460)
142 PRK06176 cystathionine gamma-s 99.8 3.2E-18 7E-23 167.3 19.0 158 149-333 49-210 (380)
143 KOG1402 Ornithine aminotransfe 99.8 3.6E-19 7.7E-24 165.2 11.5 209 103-325 53-279 (427)
144 PRK05967 cystathionine beta-ly 99.8 2.9E-18 6.4E-23 168.0 18.4 155 148-328 62-216 (395)
145 PLN00175 aminotransferase fami 99.8 1.2E-17 2.7E-22 164.8 23.0 203 109-334 54-274 (413)
146 PRK08742 adenosylmethionine--8 99.8 3.7E-18 8E-23 171.1 19.4 210 103-325 58-309 (472)
147 PRK02731 histidinol-phosphate 99.8 4.2E-18 9.1E-23 164.8 19.1 198 108-334 31-240 (367)
148 PRK05630 adenosylmethionine--8 99.8 2.9E-18 6.4E-23 169.7 18.0 215 103-333 34-284 (422)
149 COG2873 MET17 O-acetylhomoseri 99.8 2.2E-18 4.7E-23 162.6 15.8 173 131-332 43-222 (426)
150 PRK07671 cystathionine beta-ly 99.8 5.2E-18 1.1E-22 165.7 19.3 158 149-333 49-210 (377)
151 PRK08776 cystathionine gamma-s 99.8 5.5E-18 1.2E-22 167.0 19.5 159 149-333 59-221 (405)
152 PRK07481 hypothetical protein; 99.8 5.8E-18 1.3E-22 168.9 19.4 211 103-325 36-285 (449)
153 TIGR03540 DapC_direct LL-diami 99.8 1.6E-17 3.5E-22 161.8 22.1 204 108-334 28-252 (383)
154 TIGR02080 O_succ_thio_ly O-suc 99.8 4.5E-18 9.7E-23 166.4 18.0 159 149-333 50-212 (382)
155 PRK07681 aspartate aminotransf 99.8 1.9E-17 4.1E-22 162.4 22.4 202 108-334 31-254 (399)
156 COG0626 MetC Cystathionine bet 99.8 5.1E-18 1.1E-22 164.9 17.9 160 149-333 62-225 (396)
157 KOG1401 Acetylornithine aminot 99.8 9.4E-18 2E-22 159.9 18.8 216 103-332 50-288 (433)
158 PRK00011 glyA serine hydroxyme 99.8 5.6E-18 1.2E-22 166.9 18.0 197 109-333 25-240 (416)
159 TIGR01437 selA_rel uncharacter 99.8 1.1E-17 2.5E-22 162.5 19.9 203 109-334 8-222 (363)
160 PRK07483 hypothetical protein; 99.8 6E-18 1.3E-22 168.5 18.3 210 103-325 24-272 (443)
161 PRK08361 aspartate aminotransf 99.8 1.8E-17 3.8E-22 162.2 21.3 198 109-334 33-252 (391)
162 PRK06207 aspartate aminotransf 99.8 3.7E-17 8.1E-22 160.9 23.6 205 109-334 39-266 (405)
163 TIGR01141 hisC histidinol-phos 99.8 6.9E-18 1.5E-22 161.9 17.6 195 109-334 19-225 (346)
164 PRK07324 transaminase; Validat 99.8 8.7E-18 1.9E-22 163.6 18.5 195 109-334 26-237 (373)
165 PRK06918 4-aminobutyrate amino 99.8 1.6E-17 3.5E-22 165.8 20.7 205 103-326 48-292 (451)
166 PRK08297 L-lysine aminotransfe 99.8 3.5E-18 7.5E-23 170.2 15.7 220 104-333 39-304 (443)
167 PRK09148 aminotransferase; Val 99.8 3.2E-17 6.9E-22 161.4 22.4 208 108-334 29-253 (405)
168 PRK06290 aspartate aminotransf 99.8 3.2E-17 6.9E-22 161.8 22.4 203 108-334 43-266 (410)
169 PRK05764 aspartate aminotransf 99.8 3.4E-17 7.3E-22 159.9 22.3 200 109-334 31-253 (393)
170 PRK08045 cystathionine gamma-s 99.8 1E-17 2.2E-22 164.1 18.6 159 149-333 51-213 (386)
171 PRK08064 cystathionine beta-ly 99.8 1E-17 2.2E-22 164.4 18.4 158 149-333 53-214 (390)
172 cd00615 Orn_deC_like Ornithine 99.8 3.5E-18 7.6E-23 161.2 14.6 159 149-331 58-231 (294)
173 PRK07036 hypothetical protein; 99.8 1.6E-17 3.6E-22 166.3 19.9 211 104-326 46-294 (466)
174 TIGR03235 DNA_S_dndA cysteine 99.8 2.9E-17 6.3E-22 158.2 20.9 187 124-333 10-212 (353)
175 PRK07777 aminotransferase; Val 99.8 5.1E-17 1.1E-21 158.6 22.9 203 109-334 24-247 (387)
176 TIGR03537 DapC succinyldiamino 99.8 4.5E-17 9.7E-22 157.0 22.2 202 111-334 2-221 (350)
177 PRK09276 LL-diaminopimelate am 99.8 4.9E-17 1.1E-21 158.5 22.6 203 108-334 30-254 (385)
178 PRK00950 histidinol-phosphate 99.8 1.3E-17 2.8E-22 160.9 18.3 193 109-334 34-238 (361)
179 PRK07366 succinyldiaminopimela 99.8 4.1E-17 8.9E-22 159.3 22.0 204 108-334 29-254 (388)
180 PRK08088 4-aminobutyrate amino 99.8 2E-17 4.2E-22 164.0 19.9 211 104-333 36-281 (425)
181 PRK03158 histidinol-phosphate 99.8 9.5E-18 2.1E-22 162.0 17.1 198 109-334 29-237 (359)
182 PRK05957 aspartate aminotransf 99.8 5.9E-17 1.3E-21 158.6 22.9 203 110-334 28-248 (389)
183 PRK07682 hypothetical protein; 99.8 4.2E-17 9E-22 158.7 21.4 203 109-334 20-241 (378)
184 cd00613 GDC-P Glycine cleavage 99.8 2.4E-17 5.3E-22 160.9 19.7 198 110-333 21-238 (398)
185 PRK06931 diaminobutyrate--2-ox 99.8 2.5E-17 5.5E-22 164.7 20.1 204 104-326 53-298 (459)
186 PRK06348 aspartate aminotransf 99.8 6E-17 1.3E-21 158.2 22.2 203 109-334 29-249 (384)
187 PRK07269 cystathionine gamma-s 99.8 1.5E-17 3.3E-22 161.7 17.9 156 149-333 53-212 (364)
188 PRK02948 cysteine desulfurase; 99.8 3.6E-17 7.8E-22 159.2 20.0 187 124-332 12-211 (381)
189 COG0161 BioA Adenosylmethionin 99.8 9.5E-18 2.1E-22 164.3 15.8 210 103-325 38-287 (449)
190 PRK08912 hypothetical protein; 99.8 8.4E-17 1.8E-21 157.1 22.2 203 109-334 26-247 (387)
191 PRK13355 bifunctional HTH-doma 99.8 4.6E-17 9.9E-22 165.2 20.9 200 106-333 143-367 (517)
192 PRK10534 L-threonine aldolase; 99.8 9.5E-18 2.1E-22 160.2 15.0 196 111-334 1-210 (333)
193 TIGR00474 selA seryl-tRNA(sec) 99.8 5.7E-17 1.2E-21 161.5 21.0 202 109-334 74-301 (454)
194 cd00609 AAT_like Aspartate ami 99.8 6.6E-17 1.4E-21 153.4 20.6 195 113-334 2-219 (350)
195 cd00378 SHMT Serine-glycine hy 99.8 2E-17 4.3E-22 162.0 17.4 194 109-334 19-237 (402)
196 PRK08068 transaminase; Reviewe 99.8 9E-17 1.9E-21 157.1 22.0 199 109-334 32-255 (389)
197 PRK07309 aromatic amino acid a 99.8 1.2E-16 2.7E-21 156.3 22.8 200 109-334 30-252 (391)
198 PRK08960 hypothetical protein; 99.8 1.1E-16 2.3E-21 156.4 22.3 196 109-334 32-249 (387)
199 PRK07049 methionine gamma-lyas 99.8 3.6E-17 7.8E-22 162.2 18.9 163 149-334 82-257 (427)
200 COG0520 csdA Selenocysteine ly 99.8 8.5E-17 1.9E-21 158.2 21.3 187 124-333 34-237 (405)
201 PRK05942 aspartate aminotransf 99.8 1.2E-16 2.6E-21 156.5 22.1 200 108-334 34-258 (394)
202 cd06453 SufS_like Cysteine des 99.8 7.7E-17 1.7E-21 156.1 20.4 186 125-333 12-213 (373)
203 TIGR01976 am_tr_V_VC1184 cyste 99.8 5.7E-17 1.2E-21 158.4 19.6 188 124-334 29-230 (397)
204 PRK06917 hypothetical protein; 99.8 2.3E-17 4.9E-22 164.5 17.0 210 103-325 25-272 (447)
205 PRK06148 hypothetical protein; 99.8 2.3E-17 5.1E-22 178.6 18.2 203 103-326 618-858 (1013)
206 PLN00145 tyrosine/nicotianamin 99.8 1.2E-16 2.7E-21 158.5 22.0 199 108-333 51-276 (430)
207 TIGR01977 am_tr_V_EF2568 cyste 99.7 1.2E-16 2.6E-21 154.8 20.8 179 122-326 10-203 (376)
208 PRK14012 cysteine desulfurase; 99.7 5.8E-17 1.3E-21 159.2 18.9 197 109-332 4-217 (404)
209 TIGR02006 IscS cysteine desulf 99.7 1E-16 2.2E-21 157.5 20.2 196 109-331 4-214 (402)
210 PRK08153 histidinol-phosphate 99.7 7.6E-17 1.6E-21 156.8 19.1 198 109-334 32-238 (369)
211 cd01494 AAT_I Aspartate aminot 99.7 6.6E-17 1.4E-21 137.6 16.5 158 152-334 2-170 (170)
212 PRK03317 histidinol-phosphate 99.7 6.3E-17 1.4E-21 156.9 18.3 196 110-334 27-243 (368)
213 PRK09147 succinyldiaminopimela 99.7 2.3E-16 5E-21 154.6 22.1 208 108-334 28-260 (396)
214 TIGR03251 LAT_fam L-lysine 6-t 99.7 1.7E-17 3.7E-22 164.8 14.3 217 104-333 32-297 (431)
215 PRK08636 aspartate aminotransf 99.7 3.5E-16 7.6E-21 153.7 23.2 205 109-334 33-263 (403)
216 PLN02656 tyrosine transaminase 99.7 2.7E-16 5.9E-21 155.0 22.2 201 107-333 29-255 (409)
217 PRK07683 aminotransferase A; V 99.7 3.9E-16 8.5E-21 152.6 23.0 199 109-334 28-248 (387)
218 TIGR03392 FeS_syn_CsdA cystein 99.7 2E-16 4.3E-21 154.9 20.9 199 109-333 17-231 (398)
219 TIGR01979 sufS cysteine desulf 99.7 2.7E-16 5.9E-21 154.0 21.7 198 110-333 20-233 (403)
220 PRK07550 hypothetical protein; 99.7 4E-16 8.7E-21 152.3 22.7 202 109-334 29-251 (386)
221 PLN00143 tyrosine/nicotianamin 99.7 2.9E-16 6.2E-21 154.8 21.8 205 107-333 30-256 (409)
222 TIGR03538 DapC_gpp succinyldia 99.7 3.1E-16 6.6E-21 153.5 21.2 205 108-334 27-259 (393)
223 KOG0053 Cystathionine beta-lya 99.7 5.8E-17 1.3E-21 156.3 15.4 158 150-333 77-238 (409)
224 PRK08175 aminotransferase; Val 99.7 5.7E-16 1.2E-20 151.8 22.8 206 108-334 28-252 (395)
225 PRK09295 bifunctional cysteine 99.7 3.6E-16 7.9E-21 153.6 21.2 199 109-333 24-238 (406)
226 PRK10874 cysteine sulfinate de 99.7 5.3E-16 1.2E-20 152.0 22.2 199 109-333 20-234 (401)
227 TIGR03812 tyr_de_CO2_Arch tyro 99.7 5.7E-16 1.2E-20 149.9 21.9 204 108-333 22-239 (373)
228 PRK03321 putative aminotransfe 99.7 1E-16 2.2E-21 154.3 16.6 197 110-334 23-231 (352)
229 PLN02187 rooty/superroot1 99.7 3.7E-16 8.1E-21 156.5 21.0 199 108-333 65-290 (462)
230 PRK07568 aspartate aminotransf 99.7 8.5E-16 1.9E-20 150.2 22.7 198 109-333 30-249 (397)
231 TIGR01264 tyr_amTase_E tyrosin 99.7 5.8E-16 1.3E-20 152.0 21.3 199 108-333 30-254 (401)
232 PRK09265 aminotransferase AlaT 99.7 6.5E-16 1.4E-20 151.8 21.5 199 108-333 32-254 (404)
233 PLN02651 cysteine desulfurase 99.7 5.2E-16 1.1E-20 150.4 20.5 186 124-332 11-211 (364)
234 PTZ00433 tyrosine aminotransfe 99.7 8E-16 1.7E-20 151.7 22.1 201 107-333 31-263 (412)
235 PLN02855 Bifunctional selenocy 99.7 6.2E-16 1.3E-20 152.9 21.3 199 109-333 33-247 (424)
236 PRK04311 selenocysteine syntha 99.7 5.3E-16 1.2E-20 154.9 20.8 202 109-334 79-306 (464)
237 TIGR03402 FeS_nifS cysteine de 99.7 6.5E-16 1.4E-20 150.2 21.0 185 124-332 11-209 (379)
238 PRK06225 aspartate aminotransf 99.7 4.8E-16 1E-20 151.4 19.8 197 109-334 28-240 (380)
239 PRK07865 N-succinyldiaminopime 99.7 5.8E-16 1.3E-20 150.0 20.1 196 109-334 27-238 (364)
240 TIGR01265 tyr_nico_aTase tyros 99.7 5.6E-16 1.2E-20 152.3 20.2 199 108-333 30-255 (403)
241 PRK08363 alanine aminotransfer 99.7 7.1E-16 1.5E-20 151.2 20.8 199 108-333 29-251 (398)
242 PRK01533 histidinol-phosphate 99.7 2.3E-16 5.1E-21 153.4 17.1 197 109-334 29-237 (366)
243 PRK14807 histidinol-phosphate 99.7 6.7E-16 1.5E-20 149.0 20.0 195 111-334 24-228 (351)
244 PRK07337 aminotransferase; Val 99.7 1.3E-15 2.8E-20 148.8 22.0 196 109-334 30-247 (388)
245 KOG1404 Alanine-glyoxylate ami 99.7 9.7E-17 2.1E-21 152.1 12.7 211 103-333 44-295 (442)
246 TIGR01814 kynureninase kynuren 99.7 7.2E-16 1.6E-20 151.7 19.5 198 109-330 26-242 (406)
247 TIGR03539 DapC_actino succinyl 99.7 9.4E-16 2E-20 148.3 19.9 199 108-334 20-232 (357)
248 PRK13520 L-tyrosine decarboxyl 99.7 9.1E-16 2E-20 148.2 19.5 182 124-324 32-222 (371)
249 cd06451 AGAT_like Alanine-glyo 99.7 6.3E-16 1.4E-20 148.8 18.4 177 124-333 10-199 (356)
250 PRK06107 aspartate aminotransf 99.7 1.9E-15 4.2E-20 148.5 21.7 205 108-334 32-256 (402)
251 COG1104 NifS Cysteine sulfinat 99.7 7.9E-16 1.7E-20 148.1 18.1 186 125-331 14-213 (386)
252 PF01041 DegT_DnrJ_EryC1: DegT 99.7 6.8E-16 1.5E-20 149.9 17.8 156 149-334 24-188 (363)
253 PRK13238 tnaA tryptophanase/L- 99.7 1.3E-15 2.8E-20 152.4 20.2 204 108-334 35-273 (460)
254 PRK08354 putative aminotransfe 99.7 1.6E-15 3.4E-20 144.2 19.8 182 109-333 8-196 (311)
255 COG0399 WecE Predicted pyridox 99.7 7.3E-16 1.6E-20 149.0 17.7 156 149-334 33-197 (374)
256 PRK07582 cystathionine gamma-l 99.7 8E-16 1.7E-20 149.7 18.0 155 149-333 50-208 (366)
257 KOG1549 Cysteine desulfurase N 99.7 1.1E-15 2.3E-20 147.9 18.2 197 109-331 44-253 (428)
258 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1E-15 2.2E-20 146.7 18.1 155 148-333 16-180 (352)
259 PRK05839 hypothetical protein; 99.7 2.6E-15 5.6E-20 146.3 20.6 206 108-334 23-247 (374)
260 PRK06836 aspartate aminotransf 99.7 2.5E-15 5.5E-20 147.2 20.6 197 109-334 33-259 (394)
261 PRK15481 transcriptional regul 99.7 1.2E-15 2.5E-20 151.4 18.3 195 109-334 85-296 (431)
262 PRK05387 histidinol-phosphate 99.7 1.5E-15 3.3E-20 146.1 18.2 190 109-334 24-225 (353)
263 PRK06855 aminotransferase; Val 99.7 3.5E-15 7.6E-20 148.3 21.3 205 108-333 31-257 (433)
264 COG2008 GLY1 Threonine aldolas 99.7 3.8E-16 8.2E-21 147.5 13.2 200 112-333 2-212 (342)
265 PLN03026 histidinol-phosphate 99.7 2.2E-15 4.7E-20 147.2 19.1 195 108-334 51-255 (380)
266 PRK09105 putative aminotransfe 99.7 1.8E-15 3.9E-20 147.3 18.5 194 109-334 43-248 (370)
267 PRK05166 histidinol-phosphate 99.7 1.8E-15 3.9E-20 147.0 18.2 198 109-333 36-245 (371)
268 PRK06434 cystathionine gamma-l 99.7 1.2E-15 2.6E-20 149.3 16.9 156 149-333 63-222 (384)
269 PF01212 Beta_elim_lyase: Beta 99.7 4.1E-16 8.8E-21 147.1 13.1 192 113-334 1-208 (290)
270 PRK14809 histidinol-phosphate 99.7 3.3E-15 7.2E-20 144.3 19.5 195 108-334 29-237 (357)
271 TIGR03588 PseC UDP-4-keto-6-de 99.7 2E-15 4.4E-20 147.2 17.9 159 149-333 28-197 (380)
272 TIGR02379 ECA_wecE TDP-4-keto- 99.7 3.7E-15 8.1E-20 145.5 18.8 158 145-333 26-194 (376)
273 TIGR02326 transamin_PhnW 2-ami 99.7 3.6E-15 7.9E-20 144.2 18.3 159 149-334 34-205 (363)
274 PRK05664 threonine-phosphate d 99.7 4.7E-15 1E-19 142.1 18.8 181 109-334 20-207 (330)
275 PTZ00377 alanine aminotransfer 99.7 6.6E-15 1.4E-19 148.2 20.6 191 125-333 90-314 (481)
276 cd06450 DOPA_deC_like DOPA dec 99.7 5.9E-15 1.3E-19 141.2 19.3 169 149-326 37-220 (345)
277 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 5.1E-15 1.1E-19 141.7 18.9 179 124-334 10-201 (355)
278 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 4.6E-15 9.9E-20 144.7 18.8 158 145-332 26-192 (375)
279 PTZ00376 aspartate aminotransf 99.7 3.1E-15 6.8E-20 147.1 17.6 201 109-331 29-263 (404)
280 PRK07590 L,L-diaminopimelate a 99.7 5.2E-15 1.1E-19 145.7 18.9 199 109-334 34-264 (409)
281 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.9E-15 4.2E-20 148.0 14.9 158 150-331 66-251 (417)
282 cd00617 Tnase_like Tryptophana 99.6 8.7E-15 1.9E-19 145.1 19.5 204 108-334 10-248 (431)
283 PLN02368 alanine transaminase 99.6 7.7E-15 1.7E-19 144.7 19.0 174 141-332 102-305 (407)
284 TIGR03403 nifS_epsilon cystein 99.6 1.5E-14 3.3E-19 140.9 20.8 186 124-331 11-212 (382)
285 PRK09257 aromatic amino acid a 99.6 8.1E-15 1.8E-19 143.7 18.6 206 110-332 27-259 (396)
286 PRK11658 UDP-4-amino-4-deoxy-L 99.6 6.7E-15 1.5E-19 143.8 17.8 155 149-333 32-194 (379)
287 PLN02974 adenosylmethionine-8- 99.6 5.4E-15 1.2E-19 156.0 18.0 214 104-325 356-657 (817)
288 COG1168 MalY Bifunctional PLP- 99.6 2.5E-14 5.3E-19 135.9 20.6 195 109-328 25-238 (388)
289 PF00266 Aminotran_5: Aminotra 99.6 2E-14 4.3E-19 139.5 20.3 186 124-332 11-212 (371)
290 PRK07392 threonine-phosphate d 99.6 1.4E-14 2.9E-19 140.3 18.9 198 109-334 22-231 (360)
291 KOG2467 Glycine/serine hydroxy 99.6 5.8E-16 1.3E-20 145.6 8.8 220 9-332 22-263 (477)
292 PRK09275 aspartate aminotransf 99.6 6.6E-15 1.4E-19 148.8 16.6 204 109-334 100-326 (527)
293 PRK03967 histidinol-phosphate 99.6 1.6E-14 3.4E-19 138.9 18.5 190 109-334 18-219 (337)
294 KOG1368 Threonine aldolase [Am 99.6 1.2E-15 2.6E-20 140.2 10.1 203 109-334 21-238 (384)
295 PRK04870 histidinol-phosphate 99.6 1.5E-14 3.3E-19 139.6 18.3 194 109-334 26-232 (356)
296 PLN02409 serine--glyoxylate am 99.6 1.3E-14 2.7E-19 142.9 18.0 181 124-333 20-214 (401)
297 PRK06358 threonine-phosphate d 99.6 2.9E-14 6.3E-19 137.9 19.9 195 109-333 19-227 (354)
298 PRK08056 threonine-phosphate d 99.6 2.3E-14 4.9E-19 138.6 19.0 194 108-333 19-226 (356)
299 PLN02397 aspartate transaminas 99.6 2.6E-14 5.7E-19 141.6 19.0 202 109-332 48-282 (423)
300 PRK13479 2-aminoethylphosphona 99.6 4.6E-14 1E-18 136.6 19.0 178 125-334 17-207 (368)
301 TIGR03542 DAPAT_plant LL-diami 99.6 4.2E-14 9.2E-19 139.0 18.6 201 108-334 32-261 (402)
302 PLN02672 methionine S-methyltr 99.6 7.2E-14 1.6E-18 150.0 21.5 204 106-333 694-924 (1082)
303 PRK02610 histidinol-phosphate 99.6 6.4E-14 1.4E-18 136.4 19.5 198 109-334 28-249 (374)
304 TIGR01140 L_thr_O3P_dcar L-thr 99.6 2.5E-14 5.5E-19 137.0 15.7 154 152-334 49-209 (330)
305 PLN02376 1-aminocyclopropane-1 99.6 4.5E-14 9.8E-19 142.6 18.0 171 145-333 93-293 (496)
306 PRK15407 lipopolysaccharide bi 99.6 6E-14 1.3E-18 139.6 18.2 163 150-334 63-234 (438)
307 PLN02450 1-aminocyclopropane-1 99.6 4.5E-14 9.7E-19 141.7 17.4 151 166-334 112-287 (468)
308 PRK06425 histidinol-phosphate 99.6 4E-14 8.7E-19 135.7 15.8 159 151-334 41-208 (332)
309 TIGR03801 asp_4_decarbox aspar 99.6 8.2E-14 1.8E-18 140.8 17.9 204 109-334 94-325 (521)
310 PLN03032 serine decarboxylase; 99.6 2.6E-13 5.5E-18 132.3 20.8 167 149-333 65-247 (374)
311 PRK14808 histidinol-phosphate 99.6 7.2E-14 1.6E-18 134.3 16.7 192 107-334 17-217 (335)
312 COG0079 HisC Histidinol-phosph 99.6 1.5E-13 3.3E-18 133.1 18.9 192 110-334 23-227 (356)
313 PRK15029 arginine decarboxylas 99.6 5.5E-14 1.2E-18 146.7 16.7 160 150-331 205-397 (755)
314 PLN02414 glycine dehydrogenase 99.6 8.9E-14 1.9E-18 148.8 17.7 161 145-325 563-732 (993)
315 PRK02769 histidine decarboxyla 99.6 2.5E-13 5.4E-18 132.9 19.2 166 149-332 64-243 (380)
316 PRK04366 glycine dehydrogenase 99.6 2.5E-13 5.5E-18 136.8 19.7 193 113-326 71-275 (481)
317 COG1103 Archaea-specific pyrid 99.5 4.9E-13 1.1E-17 121.9 18.2 196 109-332 15-230 (382)
318 PLN02607 1-aminocyclopropane-1 99.5 2.1E-13 4.6E-18 136.1 17.5 151 166-333 121-293 (447)
319 PLN02231 alanine transaminase 99.5 4.6E-13 1E-17 136.3 20.1 176 141-333 163-366 (534)
320 PRK04781 histidinol-phosphate 99.5 2.5E-13 5.5E-18 131.9 17.1 159 152-334 61-235 (364)
321 PRK07908 hypothetical protein; 99.5 5.1E-13 1.1E-17 128.7 18.9 192 108-334 21-219 (349)
322 TIGR03531 selenium_SpcS O-phos 99.5 5.1E-13 1.1E-17 132.6 18.7 166 150-333 105-286 (444)
323 PRK06959 putative threonine-ph 99.5 4.2E-13 9.1E-18 129.2 17.1 180 109-334 24-213 (339)
324 COG1167 ARO8 Transcriptional r 99.5 9.9E-13 2.1E-17 131.7 19.1 204 109-334 89-313 (459)
325 PRK01688 histidinol-phosphate 99.5 2E-13 4.4E-18 131.9 13.5 158 152-334 59-228 (351)
326 PRK04635 histidinol-phosphate 99.5 3.3E-13 7.2E-18 130.4 13.8 157 152-334 62-229 (354)
327 KOG0259 Tyrosine aminotransfer 99.5 2.8E-12 6E-17 121.7 19.0 200 109-332 61-284 (447)
328 PRK00451 glycine dehydrogenase 99.5 1.1E-12 2.3E-17 130.7 17.0 155 145-325 107-271 (447)
329 PRK08637 hypothetical protein; 99.5 2.7E-12 5.8E-17 125.6 19.6 192 124-333 21-241 (388)
330 TIGR01788 Glu-decarb-GAD gluta 99.4 4.5E-12 9.8E-17 125.9 18.6 192 124-332 53-273 (431)
331 PRK13237 tyrosine phenol-lyase 99.4 2.2E-12 4.7E-17 127.6 15.5 166 149-334 77-273 (460)
332 TIGR02618 tyr_phenol_ly tyrosi 99.4 3.7E-12 7.9E-17 125.7 14.6 166 148-333 69-265 (450)
333 PRK13578 ornithine decarboxyla 99.4 3.2E-12 7E-17 132.6 14.7 155 149-326 173-359 (720)
334 PRK15400 lysine decarboxylase 99.4 4.7E-12 1E-16 131.2 15.3 153 150-326 195-371 (714)
335 PRK09440 avtA valine--pyruvate 99.4 1.8E-11 3.9E-16 120.7 17.7 208 109-334 30-263 (416)
336 TIGR00461 gcvP glycine dehydro 99.4 2.1E-11 4.6E-16 129.5 17.1 164 145-326 525-695 (939)
337 PRK12566 glycine dehydrogenase 99.3 2.2E-11 4.8E-16 128.8 16.6 165 145-326 538-708 (954)
338 PRK15399 lysine decarboxylase 99.3 2.2E-11 4.9E-16 126.2 16.1 157 150-331 195-378 (713)
339 COG1982 LdcC Arginine/lysine/o 99.3 1.5E-11 3.3E-16 123.3 14.3 154 150-326 70-236 (557)
340 TIGR03799 NOD_PanD_pyr putativ 99.3 6.8E-11 1.5E-15 120.0 17.3 159 168-332 162-345 (522)
341 COG0075 Serine-pyruvate aminot 99.3 2.1E-10 4.6E-15 111.2 18.4 178 124-333 16-206 (383)
342 PLN02724 Molybdenum cofactor s 99.3 1.3E-10 2.8E-15 123.9 18.4 161 149-332 77-274 (805)
343 PLN02263 serine decarboxylase 99.3 7.9E-10 1.7E-14 110.2 22.1 155 154-326 137-305 (470)
344 PRK05367 glycine dehydrogenase 99.3 1.3E-10 2.7E-15 125.0 17.6 164 145-326 537-707 (954)
345 KOG1403 Predicted alanine-glyo 99.3 4.3E-12 9.4E-17 117.1 4.8 205 103-326 41-283 (452)
346 TIGR02617 tnaA_trp_ase tryptop 99.2 9.8E-11 2.1E-15 115.0 12.2 201 109-334 41-279 (467)
347 KOG0256 1-aminocyclopropane-1- 99.1 1.2E-09 2.6E-14 104.8 14.8 162 153-331 124-315 (471)
348 PLN02880 tyrosine decarboxylas 99.1 3E-09 6.6E-14 107.4 18.6 173 153-332 125-319 (490)
349 PF00282 Pyridoxal_deC: Pyrido 99.1 2.6E-09 5.7E-14 104.3 16.2 169 149-326 74-266 (373)
350 PRK03080 phosphoserine aminotr 99.1 9.1E-10 2E-14 107.7 12.8 175 124-333 23-207 (378)
351 cd00611 PSAT_like Phosphoserin 99.1 5.9E-10 1.3E-14 108.0 11.1 176 124-333 10-205 (355)
352 COG0076 GadB Glutamate decarbo 99.1 8.1E-09 1.8E-13 103.3 18.7 172 152-332 99-288 (460)
353 PLN02590 probable tyrosine dec 99.1 1.6E-08 3.6E-13 102.9 20.4 170 150-326 166-359 (539)
354 PF06838 Met_gamma_lyase: Meth 99.0 1.2E-08 2.6E-13 97.3 17.3 185 125-334 26-238 (403)
355 TIGR01366 serC_3 phosphoserine 99.0 5E-10 1.1E-14 108.9 7.7 174 124-331 14-194 (361)
356 KOG1405 4-aminobutyrate aminot 99.0 8.4E-10 1.8E-14 104.1 7.7 219 103-330 70-349 (484)
357 COG1921 SelA Selenocysteine sy 98.9 9.8E-08 2.1E-12 92.4 16.5 200 109-334 20-236 (395)
358 PRK05355 3-phosphoserine/phosp 98.8 3.3E-08 7.2E-13 96.2 12.9 175 124-333 14-208 (360)
359 TIGR01364 serC_1 phosphoserine 98.8 4.7E-08 1E-12 94.7 13.8 150 150-333 37-197 (349)
360 TIGR03811 tyr_de_CO2_Ent tyros 98.8 2.6E-07 5.6E-12 95.3 18.3 181 112-293 78-324 (608)
361 COG3844 Kynureninase [Amino ac 98.8 3E-07 6.6E-12 86.4 15.7 194 110-328 31-235 (407)
362 PF03841 SelA: L-seryl-tRNA se 98.7 4.1E-09 8.9E-14 101.1 2.9 160 153-334 50-226 (367)
363 PRK05367 glycine dehydrogenase 98.7 2.8E-07 6.1E-12 99.5 16.9 195 111-333 77-284 (954)
364 PLN02414 glycine dehydrogenase 98.7 5.9E-07 1.3E-11 97.0 17.3 198 109-333 102-312 (993)
365 KOG2862 Alanine-glyoxylate ami 98.6 7.7E-07 1.7E-11 83.1 14.3 173 125-327 29-210 (385)
366 KOG0634 Aromatic amino acid am 98.6 8E-07 1.7E-11 86.2 13.4 150 167-334 126-309 (472)
367 COG1003 GcvP Glycine cleavage 98.6 1.2E-06 2.6E-11 85.2 14.1 162 144-326 103-271 (496)
368 KOG0629 Glutamate decarboxylas 98.4 6.3E-06 1.4E-10 79.9 13.3 167 154-326 145-325 (510)
369 KOG0633 Histidinol phosphate a 98.4 1.2E-06 2.6E-11 80.2 7.6 151 155-328 74-233 (375)
370 COG4100 Cystathionine beta-lya 98.3 1.3E-05 2.8E-10 74.8 13.0 164 146-334 60-249 (416)
371 PF02347 GDC-P: Glycine cleava 98.3 1.5E-05 3.2E-10 78.9 14.2 163 145-334 105-276 (429)
372 PF05889 SLA_LP_auto_ag: Solub 98.3 1.4E-05 3.1E-10 77.6 12.8 154 161-332 67-234 (389)
373 KOG0258 Alanine aminotransfera 98.2 3.4E-05 7.4E-10 74.2 14.7 175 140-331 107-309 (475)
374 COG1448 TyrB Aspartate/tyrosin 98.1 0.00017 3.7E-09 69.5 16.7 135 169-328 98-252 (396)
375 COG3977 Alanine-alpha-ketoisov 98.1 0.0001 2.2E-09 69.0 14.0 172 139-333 67-262 (417)
376 TIGR00461 gcvP glycine dehydro 98.1 0.00015 3.2E-09 78.0 17.1 194 111-333 65-272 (939)
377 COG0403 GcvP Glycine cleavage 98.1 0.00019 4.2E-09 69.9 16.2 189 109-321 74-271 (450)
378 PF12897 Aminotran_MocR: Alani 97.9 0.00037 8.1E-09 67.5 15.3 173 150-334 69-268 (425)
379 TIGR01365 serC_2 phosphoserine 97.8 0.00016 3.4E-09 70.9 10.3 144 149-330 38-193 (374)
380 PLN02452 phosphoserine transam 97.8 0.00059 1.3E-08 66.7 14.1 184 110-333 7-212 (365)
381 KOG0628 Aromatic-L-amino-acid/ 97.6 0.001 2.3E-08 65.4 13.2 163 126-295 87-278 (511)
382 KOG2040 Glycine dehydrogenase 97.6 0.0012 2.6E-08 67.4 13.2 161 145-326 577-747 (1001)
383 PRK12566 glycine dehydrogenase 97.5 0.0035 7.6E-08 67.5 16.0 194 109-333 78-286 (954)
384 KOG1383 Glutamate decarboxylas 96.8 0.025 5.5E-07 56.0 13.2 134 150-296 120-263 (491)
385 PRK12462 phosphoserine aminotr 96.7 0.021 4.5E-07 55.8 11.8 147 149-328 48-204 (364)
386 KOG1412 Aspartate aminotransfe 96.7 0.046 1E-06 51.8 13.2 175 118-328 69-259 (410)
387 COG3033 TnaA Tryptophanase [Am 96.4 0.031 6.6E-07 53.9 10.8 128 153-292 82-229 (471)
388 KOG1411 Aspartate aminotransfe 94.1 0.12 2.6E-06 49.7 6.2 100 228-328 167-279 (427)
389 PLN02994 1-aminocyclopropane-1 94.1 0.33 7.2E-06 41.5 8.4 56 145-214 91-152 (153)
390 KOG3846 L-kynurenine hydrolase 93.9 0.66 1.4E-05 44.2 10.6 192 109-325 66-279 (465)
391 PF04864 Alliinase_C: Allinase 92.3 0.25 5.4E-06 47.6 5.4 147 153-328 46-200 (363)
392 KOG3843 Predicted serine hydro 91.7 2.5 5.4E-05 39.6 10.9 161 153-332 60-236 (432)
393 PRK12595 bifunctional 3-deoxy- 78.2 27 0.00059 34.1 11.1 57 238-294 237-299 (360)
394 PRK13397 3-deoxy-7-phosphohept 72.9 50 0.0011 30.6 10.8 43 252-294 150-196 (250)
395 PRK13396 3-deoxy-7-phosphohept 72.1 41 0.00089 32.8 10.5 57 238-294 220-283 (352)
396 COG0296 GlgB 1,4-alpha-glucan 61.8 9.1 0.0002 40.1 3.9 43 260-304 205-247 (628)
397 KOG2040 Glycine dehydrogenase 59.9 63 0.0014 34.2 9.3 112 155-287 168-281 (1001)
398 COG0075 Serine-pyruvate aminot 54.1 1.6E+02 0.0035 29.1 10.9 113 142-273 58-181 (383)
399 PF03796 DnaB_C: DnaB-like hel 53.5 57 0.0012 29.8 7.5 128 145-287 29-175 (259)
400 COG1066 Sms Predicted ATP-depe 51.6 42 0.0009 33.6 6.3 57 229-287 147-215 (456)
401 PF05368 NmrA: NmrA-like famil 50.4 1.7E+02 0.0036 25.9 9.9 56 228-287 44-99 (233)
402 COG0108 RibB 3,4-dihydroxy-2-b 49.8 26 0.00057 31.3 4.3 34 252-286 156-189 (203)
403 PF08423 Rad51: Rad51; InterP 49.4 51 0.0011 30.4 6.4 85 203-287 73-183 (256)
404 TIGR01361 DAHP_synth_Bsub phos 48.1 1.6E+02 0.0034 27.4 9.5 57 238-294 144-206 (260)
405 cd05013 SIS_RpiR RpiR-like pro 47.8 1.4E+02 0.003 23.6 9.5 24 155-178 3-26 (139)
406 smart00642 Aamy Alpha-amylase 47.4 19 0.00041 31.1 3.0 29 264-292 65-93 (166)
407 PF13481 AAA_25: AAA domain; P 45.1 31 0.00067 29.6 4.1 48 239-287 129-184 (193)
408 PF02603 Hpr_kinase_N: HPr Ser 43.6 37 0.0008 27.8 4.1 40 241-289 73-112 (127)
409 PF03652 UPF0081: Uncharacteri 42.9 68 0.0015 26.7 5.6 55 237-293 38-99 (135)
410 PF00128 Alpha-amylase: Alpha 42.4 17 0.00037 33.3 2.1 29 264-292 47-75 (316)
411 cd01393 recA_like RecA is a b 41.6 78 0.0017 27.9 6.3 57 231-287 88-164 (226)
412 PLN02672 methionine S-methyltr 41.4 1.9E+02 0.0042 32.6 10.2 127 153-294 429-569 (1082)
413 cd01121 Sms Sms (bacterial rad 40.5 69 0.0015 31.4 6.1 55 230-286 138-204 (372)
414 COG0116 Predicted N6-adenine-s 40.1 2E+02 0.0043 28.5 9.0 47 139-185 163-214 (381)
415 cd00984 DnaB_C DnaB helicase C 40.1 62 0.0013 28.9 5.4 51 237-287 106-168 (242)
416 PRK08673 3-deoxy-7-phosphohept 39.0 2.9E+02 0.0064 26.7 10.0 57 238-294 212-274 (335)
417 TIGR03600 phage_DnaB phage rep 38.9 2.8E+02 0.0061 27.3 10.3 58 230-287 278-349 (421)
418 PRK09441 cytoplasmic alpha-amy 37.8 30 0.00065 35.0 3.2 32 261-292 73-104 (479)
419 PRK00910 ribB 3,4-dihydroxy-2- 37.6 59 0.0013 29.6 4.7 34 252-286 168-201 (218)
420 PF00926 DHBP_synthase: 3,4-di 36.5 73 0.0016 28.4 5.1 34 252-286 152-185 (194)
421 PRK01792 ribB 3,4-dihydroxy-2- 36.4 62 0.0013 29.3 4.6 34 252-286 167-200 (214)
422 COG0816 Predicted endonuclease 34.9 99 0.0021 26.1 5.3 54 237-292 40-99 (141)
423 COG2876 AroA 3-deoxy-D-arabino 34.7 2.4E+02 0.0053 26.5 8.2 27 268-294 200-226 (286)
424 COG0352 ThiE Thiamine monophos 34.5 65 0.0014 29.1 4.5 19 271-289 54-72 (211)
425 PRK03353 ribB 3,4-dihydroxy-2- 34.2 71 0.0015 29.0 4.7 34 252-286 167-200 (217)
426 KOG1663 O-methyltransferase [S 33.5 3.9E+02 0.0084 24.6 12.9 127 149-294 58-188 (237)
427 PRK00014 ribB 3,4-dihydroxy-2- 32.9 75 0.0016 29.1 4.6 34 252-286 172-205 (230)
428 TIGR00506 ribB 3,4-dihydroxy-2 32.5 1.1E+02 0.0023 27.5 5.4 34 252-286 157-190 (199)
429 TIGR00250 RNAse_H_YqgF RNAse H 32.0 1.1E+02 0.0025 25.1 5.2 54 238-293 36-95 (130)
430 KOG1371 UDP-glucose 4-epimeras 31.9 4.9E+02 0.011 25.3 10.4 116 167-298 4-134 (343)
431 PRK09314 bifunctional 3,4-dihy 31.0 78 0.0017 30.7 4.6 34 252-286 156-189 (339)
432 KOG0352 ATP-dependent DNA heli 30.8 2.9E+02 0.0064 28.0 8.5 46 250-298 111-158 (641)
433 COG1932 SerC Phosphoserine ami 30.2 3.1E+02 0.0068 26.9 8.5 72 112-187 7-91 (365)
434 COG0468 RecA RecA/RadA recombi 29.8 4.8E+02 0.01 24.6 10.5 86 203-289 89-193 (279)
435 cd01840 SGNH_hydrolase_yrhL_li 29.6 1.1E+02 0.0023 25.3 4.8 49 239-288 66-115 (150)
436 TIGR01362 KDO8P_synth 3-deoxy- 29.5 4.4E+02 0.0094 24.6 9.0 43 251-295 143-188 (258)
437 PRK05638 threonine synthase; V 29.1 4.5E+02 0.0098 26.2 10.0 61 164-242 111-171 (442)
438 COG0742 N6-adenine-specific me 29.1 4.1E+02 0.0089 23.5 8.5 106 151-278 25-139 (187)
439 PRK11557 putative DNA-binding 28.5 4.6E+02 0.01 23.9 10.8 25 153-177 116-140 (278)
440 PF02310 B12-binding: B12 bind 27.9 2.8E+02 0.0061 21.5 6.9 61 228-292 28-91 (121)
441 KOG1564 DNA repair protein RHP 27.3 1.3E+02 0.0029 28.7 5.3 60 228-287 177-258 (351)
442 COG2256 MGS1 ATPase related to 27.3 83 0.0018 31.4 4.1 53 238-294 60-117 (436)
443 PLN03244 alpha-amylase; Provis 26.6 61 0.0013 35.2 3.3 33 261-293 433-465 (872)
444 PF03602 Cons_hypoth95: Conser 26.5 4.3E+02 0.0093 22.9 9.4 73 203-281 66-140 (183)
445 COG1105 FruK Fructose-1-phosph 26.3 1.3E+02 0.0029 28.8 5.2 23 271-293 148-170 (310)
446 TIGR00530 AGP_acyltrn 1-acyl-s 26.2 2.2E+02 0.0048 22.2 6.0 44 241-286 81-125 (130)
447 TIGR00416 sms DNA repair prote 26.0 1.3E+02 0.0027 30.5 5.3 55 230-286 150-216 (454)
448 cd01123 Rad51_DMC1_radA Rad51_ 25.9 1.3E+02 0.0029 26.6 5.1 36 252-287 115-165 (235)
449 COG1737 RpiR Transcriptional r 25.8 5E+02 0.011 24.1 9.1 28 153-180 118-145 (281)
450 PRK13398 3-deoxy-7-phosphohept 25.8 3.9E+02 0.0085 24.9 8.3 57 238-294 146-208 (266)
451 PRK09319 bifunctional 3,4-dihy 25.7 1.4E+02 0.0029 31.1 5.5 34 252-286 161-194 (555)
452 PRK11823 DNA repair protein Ra 25.6 1.8E+02 0.0039 29.2 6.4 55 231-287 137-203 (446)
453 COG1504 Uncharacterized conser 24.9 1.7E+02 0.0038 23.7 4.8 45 238-287 50-94 (121)
454 PRK11172 dkgB 2,5-diketo-D-glu 24.8 5.4E+02 0.012 23.5 9.2 49 235-287 129-177 (267)
455 COG3010 NanE Putative N-acetyl 24.3 2E+02 0.0043 26.1 5.6 49 238-290 87-135 (229)
456 PF00248 Aldo_ket_red: Aldo/ke 24.2 3.6E+02 0.0079 24.5 7.8 65 229-296 131-195 (283)
457 PF05690 ThiG: Thiazole biosyn 24.0 3.5E+02 0.0075 25.0 7.2 60 228-289 123-182 (247)
458 PRK09318 bifunctional 3,4-dihy 23.9 1.2E+02 0.0026 30.0 4.6 34 252-286 143-176 (387)
459 PF05913 DUF871: Bacterial pro 23.9 1.5E+02 0.0033 28.9 5.3 60 233-293 6-71 (357)
460 PRK09311 bifunctional 3,4-dihy 23.5 1.3E+02 0.0027 30.0 4.7 34 252-286 158-191 (402)
461 PRK12313 glycogen branching en 23.4 75 0.0016 33.4 3.3 29 264-292 215-243 (633)
462 PRK12485 bifunctional 3,4-dihy 23.3 1.2E+02 0.0026 29.8 4.5 34 252-286 157-190 (369)
463 COG0656 ARA1 Aldo/keto reducta 23.3 3.2E+02 0.0069 25.8 7.1 53 230-287 136-188 (280)
464 TIGR02236 recomb_radA DNA repa 23.2 1.5E+02 0.0032 27.9 5.0 48 240-287 180-242 (310)
465 PRK04452 acetyl-CoA decarbonyl 23.1 1.2E+02 0.0025 29.3 4.2 18 154-171 79-96 (319)
466 COG0366 AmyA Glycosidases [Car 23.0 71 0.0015 31.8 3.0 27 264-290 72-98 (505)
467 KOG1577 Aldo/keto reductase fa 23.0 4.9E+02 0.011 24.9 8.3 80 212-301 136-215 (300)
468 PF14336 DUF4392: Domain of un 23.0 2.9E+02 0.0063 26.1 6.9 34 253-286 133-179 (291)
469 TIGR02402 trehalose_TreZ malto 22.9 75 0.0016 32.8 3.1 31 263-293 154-184 (542)
470 PRK05198 2-dehydro-3-deoxyphos 22.8 6E+02 0.013 23.8 8.7 44 251-295 151-196 (264)
471 PF06506 PrpR_N: Propionate ca 22.5 4.9E+02 0.011 22.2 9.2 49 228-288 100-149 (176)
472 PRK09361 radB DNA repair and r 22.4 1.1E+02 0.0024 27.1 3.8 57 231-287 82-157 (225)
473 PRK10785 maltodextrin glucosid 22.1 75 0.0016 33.3 3.0 27 265-291 222-248 (598)
474 PRK05595 replicative DNA helic 22.1 7.5E+02 0.016 24.6 10.1 59 229-287 284-356 (444)
475 PF02571 CbiJ: Precorrin-6x re 21.9 1E+02 0.0022 28.5 3.5 39 238-286 54-97 (249)
476 PF00266 Aminotran_5: Aminotra 21.9 6.9E+02 0.015 23.7 10.2 125 154-303 73-210 (371)
477 COG2870 RfaE ADP-heptose synth 21.9 1.4E+02 0.0031 29.8 4.5 33 254-289 146-178 (467)
478 PRK05402 glycogen branching en 21.8 81 0.0018 33.8 3.2 27 266-292 312-338 (726)
479 PF14871 GHL6: Hypothetical gl 21.6 3.3E+02 0.0072 22.4 6.2 17 271-287 46-62 (132)
480 PRK05906 lipid A biosynthesis 21.5 8.5E+02 0.019 24.6 12.7 57 228-287 189-253 (454)
481 TIGR02403 trehalose_treC alpha 21.2 83 0.0018 32.5 3.0 25 266-290 72-96 (543)
482 KOG0742 AAA+-type ATPase [Post 21.2 65 0.0014 32.4 2.1 30 265-294 417-456 (630)
483 COG1707 ACT domain-containing 20.7 3.3E+02 0.0071 23.9 6.0 99 155-288 74-174 (218)
484 TIGR03586 PseI pseudaminic aci 20.5 5.2E+02 0.011 24.9 8.1 42 252-295 161-205 (327)
485 PF13401 AAA_22: AAA domain; P 20.5 96 0.0021 24.4 2.7 23 271-293 76-99 (131)
486 PRK00109 Holliday junction res 20.3 5E+02 0.011 21.5 7.1 54 238-293 42-101 (138)
487 PRK10933 trehalose-6-phosphate 20.1 94 0.002 32.2 3.2 26 266-291 78-103 (551)
488 PF11814 DUF3335: Peptidase_C3 20.1 6.5E+02 0.014 22.7 8.5 34 234-270 114-147 (207)
489 PF04131 NanE: Putative N-acet 20.0 3.5E+02 0.0076 24.1 6.3 48 238-290 53-100 (192)
No 1
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=6.5e-64 Score=494.69 Aligned_cols=324 Identities=70% Similarity=1.213 Sum_probs=281.4
Q ss_pred hhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCC
Q 019931 5 SLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSS 84 (334)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (334)
-+||.|+|++|..|+...++|++|||.+.+.+.+.-.....+++.++++|++++||++.+|++++++.+|++|+.+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (476)
T PLN02955 4 HSWDKWVEEAVNVLESRQILRSLRPICMSRQNEEEIVKSRANGGDDYEVFDGLCQWDRTSVEVSVSIPTFQKWLHDIPSN 83 (476)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCccCCCCCCCccchhhcccCCchhhccCCCcccccceEEEechhhHHHHHHHHhcc
Confidence 36999999999999999999999999988776443345557889999999999999999999999999999999998888
Q ss_pred CCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHH----HHHHhcCCCCccccccCchHHHHHHHHHHH
Q 019931 85 GDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSALICGYTNYHRLLESCLA 160 (334)
Q Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~~~G~~~~~~~LE~~La 160 (334)
|... .+.+.+.+.+. ..+|+++||+|||||||++||++++ ++++||.|+++||+++|++.+|++||++||
T Consensus 84 ~~~~--~~~~~~~~~~~----~~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA 157 (476)
T PLN02955 84 GEEI--FSGDALAEERK----GRFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLA 157 (476)
T ss_pred cccc--cCCCCcccccc----CCCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHH
Confidence 7431 22222222222 3558999999999999999999998 567899999999999999999999999999
Q ss_pred hHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHH
Q 019931 161 DLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMS 240 (334)
Q Consensus 161 ~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~ 240 (334)
+|+|.|.+++|+||+.||++++.+|+....++...+.+..+++++|++|+++|+|+++|+++++...+++++.|+|||++
T Consensus 158 ~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~ 237 (476)
T PLN02955 158 DLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMY 237 (476)
T ss_pred HHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHH
Confidence 99999999999999999999999985322111112223335688999999999999999999854335789999999999
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL 320 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl 320 (334)
+|+++|+.++.++++|++|++|||+|+++||++|.++|++||++||+||||++|++|++|+|.++++++.+++||+++||
T Consensus 238 ~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TL 317 (476)
T PLN02955 238 HLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTL 317 (476)
T ss_pred HHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeC
Confidence 99999987665678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCccEEeeC
Q 019931 321 SKAAGCQGGFIACR 334 (334)
Q Consensus 321 sKa~G~~GG~i~~~ 334 (334)
||+||+.||||+|+
T Consensus 318 sKA~G~~GGfi~gs 331 (476)
T PLN02955 318 SKAAGCHGGFIACS 331 (476)
T ss_pred ccchhccCceeecH
Confidence 99999999999985
No 2
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-55 Score=426.63 Aligned_cols=246 Identities=46% Similarity=0.684 Sum_probs=223.8
Q ss_pred hhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCC
Q 019931 5 SLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSS 84 (334)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (334)
|.|..|++++|+.+++.+++|.++.+...+.. |+.. +
T Consensus 1 ~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~----------------------------------------~~~~---~ 37 (388)
T COG0156 1 MDFLSFLRQALQALKAEGLYRGLRALDRRQGL----------------------------------------AIRA---D 37 (388)
T ss_pred CchHHHHHHHHHHHHhhccccchhhccccCCc----------------------------------------ceec---C
Confidence 35778999999999999999999887643221 1010 2
Q ss_pred CCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHH----HHHHhcCCCCccccccCchHHHHHHHHHHH
Q 019931 85 GDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSALICGYTNYHRLLESCLA 160 (334)
Q Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~~~G~~~~~~~LE~~La 160 (334)
|++++||||||||||++||++++ ++++||.|.+++|+++|+.+.|.+||++||
T Consensus 38 -----------------------~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA 94 (388)
T COG0156 38 -----------------------GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELA 94 (388)
T ss_pred -----------------------CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHH
Confidence 38999999999999999999998 456899999999999999999999999999
Q ss_pred hHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHH
Q 019931 161 DLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMS 240 (334)
Q Consensus 161 ~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~ 240 (334)
+|+|.|.+++|+||+.||.+++.+++++ +|+|++|+++|+|+++|++++ ++++++|+|||++
T Consensus 95 ~f~g~e~al~f~SGy~AN~~~i~~l~~~--------------~dli~~D~lnHASiidG~rls----~a~~~~f~HnD~~ 156 (388)
T COG0156 95 DFLGAEAALLFSSGFVANLGLLSALLKK--------------GDLIFSDELNHASIIDGIRLS----RAEVRRFKHNDLD 156 (388)
T ss_pred HHhCCCcEEEEcccchhHHHHHHHhcCC--------------CcEEEEechhhhhHHHHHHhC----CCcEEEecCCCHH
Confidence 9999999999999999999999999875 899999999999999999999 8999999999999
Q ss_pred HHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEE
Q 019931 241 HLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDIC 316 (334)
Q Consensus 241 ~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div 316 (334)
+||++|++.. .++++|++|++|||+|+++||++|++||+||+++|+|||||++|++|++|+|+++++|+. .++||+
T Consensus 157 ~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~ 236 (388)
T COG0156 157 HLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDII 236 (388)
T ss_pred HHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEE
Confidence 9999998732 147899999999999999999999999999999999999999999999999999999998 556999
Q ss_pred EecCcccccCCccEEeeC
Q 019931 317 VGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 317 ~~SlsKa~G~~GG~i~~~ 334 (334)
++||||+||+.||||+|+
T Consensus 237 ~gTlsKAlGs~Gg~v~g~ 254 (388)
T COG0156 237 VGTLGKALGSSGGYIAGS 254 (388)
T ss_pred EEEchhhhcccCceeeCc
Confidence 999999999999999985
No 3
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-50 Score=368.91 Aligned_cols=263 Identities=43% Similarity=0.685 Sum_probs=228.3
Q ss_pred cccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCCCCCcceeecCCCCCccc
Q 019931 22 KVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSSGDENEIICGDGLANDKT 101 (334)
Q Consensus 22 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 101 (334)
...|++||++..-..+.+-...-.+-+++.+.|++.+.|++..|+...+-.+++. .|.
T Consensus 8 ~~~~slrpi~m~R~~q~~~~q~r~~l~~~legi~gagtwk~erVi~s~q~p~i~v-------~G~--------------- 65 (417)
T KOG1359|consen 8 QILRSLRPICMSRQAQEAIAQLRAILGDELEGIKGAGTWKRERVITSRQGPTIQV-------KGS--------------- 65 (417)
T ss_pred HHHHHhCccccchhhHHHHHHHHHhccCccceecccccceeeeEEeecccceEEE-------ecc---------------
Confidence 4567888877643321111111246778899999999999999877553333332 331
Q ss_pred chhcccceeEEEeecCccCCCCCCHHHHH----HHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHH
Q 019931 102 ITFARQFKRLLLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAA 177 (334)
Q Consensus 102 ~~~~~~g~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~A 177 (334)
.+++||||.||||||+.||+|++ |+++||.|..+.|+++|+..+|..||.+||+|.+.|++++++|++.|
T Consensus 66 ------~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdA 139 (417)
T KOG1359|consen 66 ------DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDA 139 (417)
T ss_pred ------ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEecccccc
Confidence 18899999999999999999999 56789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhc-CCCCcEEE
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSC-CTMRKKVV 256 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~-~~~~~~lV 256 (334)
|++++.++.++ .|.|++|++||+|+++|+++++ +|.|-|+-+||..+.+ ++.+.++|
T Consensus 140 Nag~feail~p--------------edAvfSDeLNhASIIdGirLck--------ry~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 140 NAGAFEAILTP--------------EDAVFSDELNHASIIDGIRLCK--------RYRHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred chHHHHHhcCh--------------hhhhhccccccchhhhhhHHHh--------hhccchhHHHHHHHHHhhhheEEEE
Confidence 99999999876 7899999999999999999983 6889999999977764 45578999
Q ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCccEEeeC
Q 019931 257 VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFIACR 334 (334)
Q Consensus 257 v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i~~~ 334 (334)
+++++|||||+++||++|.+|++|||++|++||+|++|++|++|+|..+.+++..++||+.+||+|++| +.|||++|+
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp 276 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGP 276 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 689999885
No 4
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=5.9e-45 Score=342.32 Aligned_cols=210 Identities=40% Similarity=0.656 Sum_probs=197.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~a 184 (334)
+++--||||||||++.||+|.+|+ ++||.|.+|.|.+.|++..|.+||++||++.++|.+|+|+|++-||..++.+
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft 250 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT 250 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence 677789999999999999999965 5799999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcCCCC
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDSLFS 263 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~v~n 263 (334)
|.+. + +|.+|++|+.||+|++.|++.+ +..-..|+|||+++||++|+..+ .-+|+|.+|+|+|
T Consensus 251 Lak~---l---------pgcei~SD~gNHASMI~GIrns----~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhS 314 (570)
T KOG1360|consen 251 LAKK---L---------PGCEIFSDEGNHASMIQGIRNS----RVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHS 314 (570)
T ss_pred HHHH---C---------CCcEEeccccchHHHHHHhhhc----CCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeec
Confidence 9875 2 4899999999999999999988 77778999999999999998764 3579999999999
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
|+|.++||++|++++++||++.++||+|+.|+||+.|.|+.++.|+.+.+||+.|||+|+||+.||||+++
T Consensus 315 M~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGYIAat 385 (570)
T KOG1360|consen 315 MDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGYIAAT 385 (570)
T ss_pred cCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccccceehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999863
No 5
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1e-40 Score=327.81 Aligned_cols=254 Identities=33% Similarity=0.540 Sum_probs=215.4
Q ss_pred hhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCC
Q 019931 5 SLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSS 84 (334)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (334)
|.|.++++++|+.+++++++|.+++++..++. + +.+.+ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~----~~~~~--------------~ 39 (406)
T PRK13393 1 MNYEQYFQRQLDGLRREGRYRVFADLERQAGA-----------------------F----PRATH--------------H 39 (406)
T ss_pred CChHHHHHHHHHHHHHcCCCceeeeccccCCC-----------------------c----ceeEE--------------e
Confidence 46788999999999999999999887643221 0 00000 0
Q ss_pred CCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHH
Q 019931 85 GDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLA 160 (334)
Q Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La 160 (334)
+ ..++++++||+|||||||++||+|++++ ++|+.+++++|..+|+.+.+.+||++|+
T Consensus 40 ~-------------------~~~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la 100 (406)
T PRK13393 40 G-------------------PDGPREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELA 100 (406)
T ss_pred c-------------------cCCCccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHH
Confidence 0 0113889999999999999999999955 4578888889999998889999999999
Q ss_pred hHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHH
Q 019931 161 DLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMS 240 (334)
Q Consensus 161 ~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~ 240 (334)
+++|.+.+++|+||++||..++.++... .++++|+++..+|+++..++++. +.+++.++|+|++
T Consensus 101 ~~~g~~~~~~~~SG~~An~~ai~~l~~~------------~~g~~I~~~~~~H~s~~~~~~~~----g~~~~~~~~~d~~ 164 (406)
T PRK13393 101 DLHGKEAALLFTSGYVSNWAALSTLGSR------------LPGCVILSDELNHASMIEGIRHS----RAEKRIFRHNDPA 164 (406)
T ss_pred HHhCCCcEEEeCCcHHHHHHHHHHhhcC------------CCCCEEEEccchhHHHHHHHHHc----CCeEEEeCCCCHH
Confidence 9999999999999999999999987652 13789999999999999999876 7788889999999
Q ss_pred HHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEec
Q 019931 241 HLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGT 319 (334)
Q Consensus 241 ~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~S 319 (334)
+++++++... +++++|++++++|++|.+.|+++|.++|++||++||+||+|+.|++|++|.|+.+++++.+++||+++|
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~t 244 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGT 244 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEe
Confidence 9999987542 357899999999999999999999999999999999999999999999999887777777767899999
Q ss_pred CcccccCCccEEeeC
Q 019931 320 LSKAAGCQGGFIACR 334 (334)
Q Consensus 320 lsKa~G~~GG~i~~~ 334 (334)
|||+||+.|||++++
T Consensus 245 lsKa~g~~GG~~~~~ 259 (406)
T PRK13393 245 LAKAFGVMGGYITGS 259 (406)
T ss_pred CchhhcccCceeeCC
Confidence 999999999999864
No 6
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.2e-40 Score=326.59 Aligned_cols=211 Identities=41% Similarity=0.667 Sum_probs=189.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
|++++||+|||||||++||+|++|+ ++|+.+++++|+.+|+++.+.+||++|++++|.+.+++++||++||..++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~ 123 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATLA 123 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHH
Confidence 3899999999999999999999954 568888888999999999999999999999999999999999999999998
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCC-CcEEEEEcCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTM-RKKVVVTDSLF 262 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~-~~~lVv~e~v~ 262 (334)
++... .++++|+++..+|+++..++... ++++..++|+|+++++++++...+ ++++|++++++
T Consensus 124 ~l~~~------------~~~~~v~~~~~~h~s~~~~~~~~----g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~ 187 (402)
T TIGR01821 124 TLAKI------------IPGCVIFSDELNHASMIEGIRHS----GAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVY 187 (402)
T ss_pred HhhCC------------CCCCEEEEcchHhHHHHHHHHHc----CCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence 87642 13789999999999999998876 788888999999999999975432 57899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
||+|.+.|+++|.++|++||++||+||||++|++|+.|.|..+++++..++||+++||||+||+.|||++++
T Consensus 188 ~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~i~~~ 259 (402)
T TIGR01821 188 SMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVGGYIAAS 259 (402)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCCceeecC
Confidence 999999999999999999999999999999999999888887777766667899999999999999998864
No 7
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=5.7e-40 Score=322.27 Aligned_cols=211 Identities=40% Similarity=0.666 Sum_probs=188.5
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
|++++||+||||||++.||+|++++ ++++.+++++|..+|+.+.+.+||++|++++|.+.+++++||++||..++.
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS 124 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 3899999999999999999999965 457888888999999999999999999999999999999999999999998
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDSLF 262 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~v~ 262 (334)
.+... .++++|+++.++|+++..++++. ++++..++|+|+++|+++++... +++++|++++++
T Consensus 125 ~l~~~------------~~~~~i~~~~~~h~s~~~~~~~~----~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~ 188 (407)
T PRK09064 125 TLAKL------------IPDCVIFSDELNHASMIEGIRRS----RCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVY 188 (407)
T ss_pred HHhCC------------CCCCEEEEeCcchHHHHHHHHHc----CCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCC
Confidence 87641 13788999999999999999877 77788899999999999997543 367899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
||+|++.|+++|.++|++||++||+||||+.|++|++|.|+.++.++..+.||+++||||+||+.|||++++
T Consensus 189 s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~~~~~ 260 (407)
T PRK09064 189 SMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGGYIAGS 260 (407)
T ss_pred CCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccCceEecC
Confidence 999999999999999999999999999999998999998887777766667899999999999999998864
No 8
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=7.4e-38 Score=307.83 Aligned_cols=255 Identities=35% Similarity=0.564 Sum_probs=213.5
Q ss_pred hhhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCC
Q 019931 4 SSLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPS 83 (334)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (334)
||.+.++++..|+++++++++|.++++...++. . ..+ +.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~-~~~---------~~----- 39 (410)
T PRK13392 1 MMNYDSYFDAALAQLHQEGRYRVFADLEREAGR--------------------------F-PRA---------RD----- 39 (410)
T ss_pred CCChHHHHHHHHHHHHHcCCCccccccccccCc--------------------------c-cee---------ee-----
Confidence 677889999999999999999988876532221 0 000 00
Q ss_pred CCCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHH
Q 019931 84 SGDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCL 159 (334)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~L 159 (334)
.| ..+|+++++|+|||||||..||.+++++ .+|+.+.+++|..+|+.+.+.+||++|
T Consensus 40 ~~-------------------~~~~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~l 100 (410)
T PRK13392 40 HG-------------------PDGPRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLEREL 100 (410)
T ss_pred cc-------------------cCCCceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHH
Confidence 00 0124889999999999999999999955 457888888999999888899999999
Q ss_pred HhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCH
Q 019931 160 ADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDM 239 (334)
Q Consensus 160 a~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~ 239 (334)
++++|.+.+++|+||++||..++.++... .++++|+++..+|+++..++++. ++++..++++|+
T Consensus 101 a~~~g~~~~i~~~sG~~a~~~~i~~l~~~------------~~g~~vi~~~~~h~s~~~~~~~~----g~~~~~~~~~d~ 164 (410)
T PRK13392 101 ADLHGKESALLFTSGYVSNDAALSTLGKL------------LPGCVILSDALNHASMIEGIRRS----GAEKQVFRHNDL 164 (410)
T ss_pred HHHhCCCCEEEECcHHHHHHHHHHHHhcC------------CCCCEEEEehhhhHHHHHHHHHc----CCeEEEEeCCCH
Confidence 99999999999999999999999877641 13688999999999998888776 788888899999
Q ss_pred HHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEe
Q 019931 240 SHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVG 318 (334)
Q Consensus 240 ~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~ 318 (334)
+++++.+++.. +++++|++++|+||+|.+.|+++|.++|++||++||+||+|+.|++|++|.|+.++.++..++||+++
T Consensus 165 ~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~ 244 (410)
T PRK13392 165 ADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQG 244 (410)
T ss_pred HHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEE
Confidence 99999887542 46899999999999999999999999999999999999999999899888887666666666789999
Q ss_pred cCcccccCCccEEeeC
Q 019931 319 TLSKAAGCQGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~~GG~i~~~ 334 (334)
||||+||+.|||++++
T Consensus 245 tlsK~~g~~GG~~~~~ 260 (410)
T PRK13392 245 TLAKAFGCLGGYIAAS 260 (410)
T ss_pred EChHhhhcccchhhcC
Confidence 9999999999998764
No 9
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=310.11 Aligned_cols=205 Identities=26% Similarity=0.442 Sum_probs=187.3
Q ss_pred EEeecCccCCCCCCHHHHH----HHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhh
Q 019931 112 LLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 112 l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~ 187 (334)
|||+|||||||++||++++ ++++||.|++++|..+|+...+.+||+++|+++|.+.+++|+||++|+.+++.++++
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~ 80 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK 80 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence 5899999999999999998 557899999999999999999999999999999999999999999999999998876
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC-----------CCCcEEE
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC-----------TMRKKVV 256 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~-----------~~~~~lV 256 (334)
+ ||.|++++..|++++.+++++ +.+++.|+|+|++++++.++.. ++++++|
T Consensus 81 ~--------------GD~Vl~~~~~h~s~~~~~~l~----~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~v 142 (392)
T PLN03227 81 R--------------GDLLVVDRGVNEALLVGVSLS----RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFL 142 (392)
T ss_pred C--------------CCEEEEeccccHHHHHHHHHc----CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEE
Confidence 4 899999999999999998877 6788889999999888866532 1368899
Q ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC--CCccEEEecCcccccCCccEEeeC
Q 019931 257 VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE--RDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 257 v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~--~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
++|+++||+|.+.|+++|+++|++||++||+||+|++|.+|++|+|..+++++. .++||++.||||++|..||+++++
T Consensus 143 i~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~ 222 (392)
T PLN03227 143 VVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGS 222 (392)
T ss_pred EEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecC
Confidence 999999999999999999999999999999999999999999999998998884 467999999999999999998764
No 10
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=6.2e-38 Score=314.48 Aligned_cols=211 Identities=27% Similarity=0.453 Sum_probs=193.0
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHH----HHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKA----AARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a----~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
.+|++|+||+|++|+|+.+||+|+++ +++||.|++++|.++|+.+.|.+||++|+++++.++++++++|++++.++
T Consensus 106 ~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sa 185 (481)
T PLN02822 106 INGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSV 185 (481)
T ss_pred ECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHH
Confidence 47799999999999999999999994 56789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC------CCc-E
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT------MRK-K 254 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~------~~~-~ 254 (334)
+++++++ +|+|+.|..+|.++..+++++ +++++.|+|||+++++..+++.. +++ +
T Consensus 186 i~a~~~~--------------gd~Ii~d~~~H~s~~~~~~ls----~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~ 247 (481)
T PLN02822 186 IPAFCKK--------------GDIIVADEGVHWGIQNGLYLS----RSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRR 247 (481)
T ss_pred HHHhCCC--------------CCEEEEeCCccHHHHHHHHHc----CCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcE
Confidence 9988764 899999999999999999988 78999999999999998886431 233 7
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccEEee
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGFIAC 333 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~i~~ 333 (334)
+|++|++++++|++.||++|+++|++||++||+||+|++|++|++|+|..+++++. .++||+++||||+||+.|||++|
T Consensus 248 ~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g 327 (481)
T PLN02822 248 YIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTG 327 (481)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEc
Confidence 99999999999999999999999999999999999999999999999999999885 46789999999999999999987
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 328 ~ 328 (481)
T PLN02822 328 S 328 (481)
T ss_pred C
Confidence 5
No 11
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=7.6e-37 Score=307.20 Aligned_cols=209 Identities=32% Similarity=0.509 Sum_probs=188.4
Q ss_pred ceeEEEeecCccCCCCC-C----HHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSS-H----PTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~-~----p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
++++|||+|||||||++ + |.+++++++|+.+++++|..+|+.+.+++||+++|+++|.+++++|++|+.+|..++
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i 178 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTII 178 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 48999999999999996 4 356668889999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC----CC------C
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC----TM------R 252 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~----~~------~ 252 (334)
.+++++ ||.|+++.++|.++..+++++ |++++.++|+|+++|++++++. .+ +
T Consensus 179 ~al~~~--------------Gd~Vi~d~~~h~s~~~~~~~~----Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 179 PALIGK--------------GGLIISDSLNHNSIVNGARGS----GATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred HHhCCC--------------CCEEEEcchhhHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHhhhhccccccccCCc
Confidence 988765 899999999999999999887 8999999999999999888632 11 1
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccEE
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGFI 331 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~i 331 (334)
+.+|++++++||+|+++++++|+++|++||++||+||+|+.|.+|++|+|.++++++. .++||+++||||+||+.|||+
T Consensus 241 k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i 320 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYI 320 (489)
T ss_pred eEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEE
Confidence 3488999999999999999999999999999999999999998999999988888875 467999999999999999999
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 321 ~~~ 323 (489)
T PLN02483 321 AGS 323 (489)
T ss_pred EcC
Confidence 874
No 12
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=8.7e-36 Score=290.67 Aligned_cols=210 Identities=40% Similarity=0.623 Sum_probs=185.0
Q ss_pred cceeEEEeecCccCCCCCCHHHHHH----HHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKA----AARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a----~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
+|+++|||++|||||++.+|+++++ +++++.+.++++...|..+.+.+||+++|+++|.+++++|+||++||..++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~ 115 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLF 115 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHH
Confidence 4599999999999999999999984 456778888899999988999999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC---CCCcEEEEEc
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC---TMRKKVVVTD 259 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~---~~~~~lVv~e 259 (334)
.+++++ ||.|+++.+.|.++..++++. +.+.+.+.++|+++|++++++. +.++++|+++
T Consensus 116 ~~l~~~--------------gd~vi~~~~~~~s~~~~~~~~----~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~ 177 (393)
T TIGR01822 116 ETLLGA--------------EDAIISDALNHASIIDGVRLC----KAKRYRYANNDMADLEAQLKEARAAGARHRLIATD 177 (393)
T ss_pred HHhCCC--------------CCEEEEeccccHHHHHHHHhc----CCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEe
Confidence 888764 899999999999999998877 5666778899999999999753 1268899999
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
+++|++|.+.|+++|+++|++||++||+||+|+.|++|.+|.+..+..++.+++||+++||||++++ .|||++++
T Consensus 178 ~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~ 253 (393)
T TIGR01822 178 GVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTAR 253 (393)
T ss_pred CCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeC
Confidence 9999999999999999999999999999999999988887777665566666789999999999964 68998864
No 13
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-37 Score=293.70 Aligned_cols=208 Identities=34% Similarity=0.525 Sum_probs=194.7
Q ss_pred eeEEEeecCccCCCCC-----CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSS-----HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~-----~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
-+.||++|.|||||++ ++.+.+++++|+...+++|-..|+...|.++|+..|+|+|+++|++|+.|+.+|...+.
T Consensus 136 ~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p 215 (519)
T KOG1357|consen 136 SRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIP 215 (519)
T ss_pred eeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcc
Confidence 4689999999999995 58888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC----------CCCc
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC----------TMRK 253 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~----------~~~~ 253 (334)
+++.+ +..|++|++||+|++.|++++ |+.++.|+|||+.+||++|++. +.++
T Consensus 216 ~l~~~--------------gsLIiSDelNHaSi~~GaRLS----gAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kk 277 (519)
T KOG1357|consen 216 SLLGK--------------GSLIISDELNHASLITGARLS----GATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKK 277 (519)
T ss_pred eeecC--------------Ccceeeccccchheecccccc----CceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchh
Confidence 98875 778999999999999999999 9999999999999999999863 1245
Q ss_pred EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccEEe
Q 019931 254 KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGFIA 332 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~i~ 332 (334)
.+|+++++++|.|.+.+|+++++++|||.++|++||||+.|..|++|+|+++++++. .++||++|||+|+||+.||||+
T Consensus 278 i~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyia 357 (519)
T KOG1357|consen 278 ILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIA 357 (519)
T ss_pred eeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceec
Confidence 688999999999999999999999999999999999999999999999999999997 4679999999999999999999
Q ss_pred eC
Q 019931 333 CR 334 (334)
Q Consensus 333 ~~ 334 (334)
++
T Consensus 358 gs 359 (519)
T KOG1357|consen 358 GS 359 (519)
T ss_pred Cc
Confidence 85
No 14
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=282.73 Aligned_cols=208 Identities=28% Similarity=0.523 Sum_probs=183.4
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
.|+.++||+|||||||.+||+|++++ ++++.+.+.++...+..+.+.+||++|++++|.+.+++++||++||.+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l 131 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLL 131 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence 45889999999999999999999954 45666665556666556788999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
++++.+ +|.|+++...|.++..+++.. +++++.++++|+++|++++++. ++++|++++++
T Consensus 132 ~~l~~~--------------g~~v~~~~~~h~s~~~~~~~~----g~~~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~ 191 (407)
T PRK07179 132 QTIADP--------------NTPVYIDFFAHMSLWEGVRAA----GAQAHPFRHNDVDHLRRQIERH--GPGIIVVDSVY 191 (407)
T ss_pred HHhCCC--------------CCEEEEECCcCHHHHHHHHHC----CCeEEEecCCCHHHHHHHHHhc--CCeEEEECCCC
Confidence 988764 788999999999999888776 7888999999999999999752 47899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
||+|.+.|+++|.++|++||++||+||+|++|.+|++|.|+..++++.+.+|++++|+||++|..+|+++++
T Consensus 192 n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~~G~l~~~ 263 (407)
T PRK07179 192 STTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAGIITCP 263 (407)
T ss_pred CCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhccCeEEEeC
Confidence 999999999999999999999999999999998999998877777776678999999999999888998864
No 15
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=3.3e-34 Score=278.58 Aligned_cols=206 Identities=25% Similarity=0.422 Sum_probs=178.2
Q ss_pred eeEEEeecCccCCCCCCHHHHH----HHHHh-------cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAK----AAARH-------GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~----a~~~~-------g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~A 177 (334)
.+++||+||||||++.||.+++ ++++| +.|.+++|++.|+.+.++++|++||+++|++.+++|+||++|
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a 83 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA 83 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence 4689999999999999999988 44567 588899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC---CCcE
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT---MRKK 254 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~---~~~~ 254 (334)
|..++..+.+ ++|+|++|..+|++++.++++. ....+.|+|+|+++|++++++.. ++++
T Consensus 84 ~~~~~~~~~~--------------~~d~ii~d~~~H~sv~~~~~~~----~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 145 (370)
T PRK05937 84 NLGLCAHLSS--------------VTDYVLWDEQVHISVVYSLSVI----SGWHQSFRHNDLDHLESLLESCRQRSFGRI 145 (370)
T ss_pred HHHHHHHhCC--------------CCCEEEEEhhhhHHHHHHHHHc----CCceEEecCCCHHHHHHHHHhhhccCCCcE
Confidence 9877665543 3799999999999999998876 33456789999999999997532 2467
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEee
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIAC 333 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~ 333 (334)
+|++++++|++|.+.|+++|.++|+++|++|++|+||+.|++|.+|.|++..++.. +.++++.||||++|+.|+.+++
T Consensus 146 ~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~~~~~tlsK~~g~~G~~vl~ 223 (370)
T PRK05937 146 FIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE-NFYAVLVTYSKALGSMGAALLS 223 (370)
T ss_pred EEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC-CCcEEEEechhhhhcCceEEEc
Confidence 88899999999999999999999999999999999999999999998876555543 3457789999999998877665
No 16
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=6.6e-32 Score=261.61 Aligned_cols=246 Identities=42% Similarity=0.621 Sum_probs=205.0
Q ss_pred hhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCC
Q 019931 5 SLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSS 84 (334)
Q Consensus 5 ~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (334)
|+|.++++.+|++.+..||||+++.+....+. |+.+ +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----------------------------------------~~~~---~ 37 (385)
T PRK05958 1 MSWLDRLEAALAQRRAAGLYRSLRPREGGAGR----------------------------------------WLVV---D 37 (385)
T ss_pred CcHHHHHHHHHHHHHHcCCCccccccccCCCc----------------------------------------eeEe---C
Confidence 68999999999999999999999998765443 3332 4
Q ss_pred CCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHH
Q 019931 85 GDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLA 160 (334)
Q Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La 160 (334)
| ++||||++|+++|+..+|+|++++. +|+.+.+.++...|..+..++++++++
T Consensus 38 g-----------------------~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la 94 (385)
T PRK05958 38 G-----------------------RRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELA 94 (385)
T ss_pred C-----------------------ceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHH
Confidence 4 9999999999999988999999664 455555667777788889999999999
Q ss_pred hHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHH
Q 019931 161 DLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMS 240 (334)
Q Consensus 161 ~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~ 240 (334)
++++.+.++++++|++++..++.+++++ ||.|+++...|.++..++.+. +.+++.++.+|++
T Consensus 95 ~~~~~~~~i~~~~g~~~~~~~l~~~~~~--------------gd~V~~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~ 156 (385)
T PRK05958 95 EWFGAERALLFSSGYAANLAVLTALAGK--------------GDLIVSDKLNHASLIDGARLS----RARVRRYPHNDVD 156 (385)
T ss_pred HHhCCCcEEEECcHHHHHHHHHHHhCCC--------------CCEEEEeCccCHHHHHHHHhc----CCceEEeCCCCHH
Confidence 9999888999999999999888776553 788999999999988887776 7888888889999
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCC-CccEEEec
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCER-DVDICVGT 319 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~-~~Div~~S 319 (334)
+++++++..++++++|+++++++++|...|+++|.++|++||++||+||+|+.|+++++|.+....+++.. ..+|+++|
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s 236 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGT 236 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEe
Confidence 99999975333478899999999999999999999999999999999999998888776665544334432 23588999
Q ss_pred CcccccCCccEEeeC
Q 019931 320 LSKAAGCQGGFIACR 334 (334)
Q Consensus 320 lsKa~G~~GG~i~~~ 334 (334)
|||+||+.||+++++
T Consensus 237 ~sK~~~~~Gg~~~~~ 251 (385)
T PRK05958 237 LGKALGSSGAAVLGS 251 (385)
T ss_pred chhhcccCCcEEEcC
Confidence 999999999998764
No 17
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-33 Score=264.10 Aligned_cols=211 Identities=30% Similarity=0.494 Sum_probs=196.8
Q ss_pred ccceeEEEeecCccCCCCCCHHHHH----HHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
.+|++++||+|+|||||..++++++ .+++||.|+||.|.++|+.+.|..||+.||+|+|+|++++++-|+++...+
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ 170 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESA 170 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhc
Confidence 6789999999999999999999998 458999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC------CC---
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT------MR--- 252 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~------~~--- 252 (334)
+.|++++ ||+|+.|...+..+..|++++ ...+..|.||||++||.++.+.. ++
T Consensus 171 ipafsKr--------------GDIi~~de~~nfaIq~GlqlS----RS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~ 232 (467)
T KOG1358|consen 171 IPAFSKR--------------GDIIFVDEAVNFAIQKGLQLS----RSTISYFKHNDMEDLERLLPEQEDEDQKNPKKAL 232 (467)
T ss_pred chhhhcc--------------CcEEEEehhhhHHHHHHHhhh----hheeEEecCCCHHHHHHhccCcchhhhhcccccc
Confidence 9998875 999999999999999999999 67889999999999999886532 11
Q ss_pred -cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccE
Q 019931 253 -KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 253 -~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~ 330 (334)
++.|++|++|-++|+++|+++|++++.||...+|+||..++|++|++|+|+++|+++. .++|++++|+.-+++..|||
T Consensus 233 ~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgF 312 (467)
T KOG1358|consen 233 TRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGF 312 (467)
T ss_pred ceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCce
Confidence 5689999999999999999999999999999999999999999999999999999987 67899999999999999999
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++|+
T Consensus 313 c~G~ 316 (467)
T KOG1358|consen 313 CAGK 316 (467)
T ss_pred eecc
Confidence 9874
No 18
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.8e-29 Score=245.82 Aligned_cols=211 Identities=41% Similarity=0.663 Sum_probs=179.1
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
++|+++|||++++|+|+..+|.++++++ +++.+.+.++...|..++++++++.+++++|.+..+++++|++++..+
T Consensus 39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~ 118 (397)
T PRK06939 39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGL 118 (397)
T ss_pred cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHH
Confidence 4569999999999999999999998554 345555667778898899999999999999988889999999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC---CCCcEEEEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC---TMRKKVVVT 258 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~---~~~~~lVv~ 258 (334)
+.+++++ ||.|+++.+.|.++..++.+. +++++.++++|+++|++++++. ..++++|++
T Consensus 119 ~~~l~~~--------------gd~vi~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 119 FETLLGK--------------EDAIISDALNHASIIDGVRLC----KAKRYRYANNDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred HHHhCCC--------------CCEEEEEhhhhHHHHHHHHhc----CCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEE
Confidence 9887764 889999999999998888877 7788888889999999988752 226789999
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
++++|++|.+.|+++|.++|++||++||+||+|++|.++..|.+....+++.+++||+++||||+| |..|||++++
T Consensus 181 ~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 181 DGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred ecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 999999999999999999999999999999999877776655544445566566789999999999 6688999864
No 19
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=5.7e-30 Score=244.91 Aligned_cols=207 Identities=46% Similarity=0.742 Sum_probs=173.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~a 184 (334)
|+|++||||+|||+++||+|+++++ +|+.+.+.+++..|..+..+++++.++++++.+.++++++|++++..++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~ 80 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLST 80 (349)
T ss_pred CCceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHH
Confidence 5799999999999999999999665 455544566788888999999999999999998899999999999988887
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC--CCcEEEEEcCCC
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT--MRKKVVVTDSLF 262 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~--~~~~lVv~e~v~ 262 (334)
++++ ||.|+++.+.|.+....++.. +++++.++..|++++++++++.. .++++|++++++
T Consensus 81 ~~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~ 142 (349)
T cd06454 81 LAGK--------------GDLIISDSLNHASIIDGIRLS----GAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVY 142 (349)
T ss_pred hcCC--------------CCEEEEehhhhHHHHHHHHHc----CCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccc
Confidence 7654 788999999999988777665 78888888889999999997632 357899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC-CCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN-CERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~-~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
|++|.+.|+++|.++|+++|+++|+|++|+.|.++..+.+.. ... ...+.|++++|+||++|..||+++++
T Consensus 143 ~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~ 214 (349)
T cd06454 143 SMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVE-EFGGLTDDVDIIMGTLGKAFGAVGGYIAGS 214 (349)
T ss_pred cCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChh-hhccccccCcEEEeechhhhcccCCEEECC
Confidence 999999999999999999999999999999887765444331 122 22456899999999999999988753
No 20
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=3.2e-29 Score=243.65 Aligned_cols=209 Identities=44% Similarity=0.670 Sum_probs=179.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
|++++||++++++|+..+|.+++++. +++...+.++...|..++++++++++++++|.+.++++++|+++++.++.
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~ 111 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLS 111 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 49999999999999999999998553 34544556677788889999999999999998888999999999999888
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDSLF 262 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~v~ 262 (334)
+++.+ ||.|+++.++|.+...++.+. +.++..+++.|++++++.+++.. +++++|++++++
T Consensus 112 ~~~~~--------------gd~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 173 (385)
T TIGR01825 112 ALLRK--------------GDIVLSDELNHASIIDGLRLT----KATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVF 173 (385)
T ss_pred HhCCC--------------CCEEEEEccccHHHHHHHHhc----CCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCC
Confidence 87654 788999999999988887776 77788888899999999887532 368899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
|++|.+.|+++|.++|++||+++|+||+|+.|+++++|.+...++++.+++||+++||||+||+.|||++++
T Consensus 174 ~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~~~~~ 245 (385)
T TIGR01825 174 SMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVGGYAAGH 245 (385)
T ss_pred cCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCCCEEecC
Confidence 999999999999999999999999999999888876666655566666778999999999999999998764
No 21
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=1.1e-28 Score=236.61 Aligned_cols=211 Identities=48% Similarity=0.722 Sum_probs=179.0
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
.+|+++|||++|+++|+..||+++++++ +|+.+.+.++...|+.+...+++++++++++.+..+++++|++++..+
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~ 92 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGV 92 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHH
Confidence 4569999999999999999999999654 456665667777888888899999999999988899999999999988
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDS 260 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~ 260 (334)
+.+++++ ||.|+++.+.|.+...++.+. +.+++.++..|+++|++++++.. .++++|++++
T Consensus 93 l~~~~~~--------------gd~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~ 154 (360)
T TIGR00858 93 ISALVGK--------------GDLILSDALNHASLIDGCRLS----GARVRRYRHNDVEHLERLLEKNRGERRKLIVTDG 154 (360)
T ss_pred HHHhCCC--------------CCEEEEEccccHHHHHHHHhc----CCceEEecCCCHHHHHHHHHHcccCCCeEEEEeC
Confidence 8776653 788999999999988888776 78888888889999999997532 3578999999
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
++|++|.+.|+++|.++|+++|++||+||+|+.|.++..+.+....+++. .+.+|+++||||+||+.|||++++
T Consensus 155 ~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~ 229 (360)
T TIGR00858 155 VFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGS 229 (360)
T ss_pred CccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcC
Confidence 99999999999999999999999999999999887776555555555554 356899999999999999998864
No 22
>PRK07505 hypothetical protein; Provisional
Probab=99.96 E-value=8.2e-28 Score=236.07 Aligned_cols=215 Identities=28% Similarity=0.384 Sum_probs=166.1
Q ss_pred hcccceeEEEeecCccCCCCCCHHHHHHHHH----hc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGNDYLGLSSHPTIAKAAAR----HG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~yLgl~~~p~v~~a~~~----~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An 178 (334)
++.+|++||||+|++||||.+||+|++|+.+ ++ .+.++++... .++.+.++|++|+++++. .+++++||++||
T Consensus 41 ~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~-~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~ 118 (402)
T PRK07505 41 TLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRV-RSQILKDLEEALSELFGA-SVLTFTSCSAAH 118 (402)
T ss_pred EecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhh-hhHHHHHHHHHHHHHhCC-CEEEECChHHHH
Confidence 4677899999999999999999999997654 44 2333344322 467889999999999998 899999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEE
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
..+++.+... ++++ ++.++|+.+..+|+++........ .+.+++.++++|+++|++++++. .+.+|++
T Consensus 119 ~~ai~~~~~~--~~~~------~~~~vi~~~~~~H~s~~~~~~~~~--~~~~v~~~~~~d~~~l~~~~~~~--~~~~vl~ 186 (402)
T PRK07505 119 LGILPLLASG--HLTG------GVPPHMVFDKNAHASLNILKGICA--DETEVETIDHNDLDALEDICKTN--KTVAYVA 186 (402)
T ss_pred HHHHHHHHhc--ccCC------CCCCEEEEchhhhHhHHhhhhhhh--cCCeEEEeCCCCHHHHHHHHhcC--CCEEEEE
Confidence 9999765431 0111 246788899999998753222211 15678889999999999998641 2345555
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCC-CCCccEEEecCcccccCCccEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNC-ERDVDICVGTLSKAAGCQGGFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~-~~~~Div~~SlsKa~G~~GG~i~~ 333 (334)
++ .|++|.+.|+++|.++|++||++||+||+|+.+.+|++|.++. ++++. .++..|++.||||+||+.||++++
T Consensus 187 ~p-~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~ 262 (402)
T PRK07505 187 DG-VYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIML 262 (402)
T ss_pred ec-ccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEe
Confidence 55 5677999999999999999999999999998877899888754 56676 566678899999999988899763
No 23
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=1.7e-27 Score=229.84 Aligned_cols=180 Identities=22% Similarity=0.242 Sum_probs=146.1
Q ss_pred ecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhh
Q 019931 115 SGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 115 ~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~ 188 (334)
.-||||||++||.|+++. ++|+ |+.++|++||++||+++|. +++++++||++||..++.+++++
T Consensus 25 ~~~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~ 94 (346)
T TIGR03576 25 SLYDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPP 94 (346)
T ss_pred cccccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCC
Confidence 358999999999999854 4563 5679999999999999998 88999999999999999999875
Q ss_pred hhhccCCCccCCCCCeEEE---EcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCC
Q 019931 189 ASLLAGDEKSFKDEKIAIF---SDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMD 265 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl---~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~ 265 (334)
||.|+ .|.++|+++.++++++ ++++ +.++|+++++. . +++++|++++ +||+
T Consensus 95 --------------gd~Vli~~~d~p~~~s~~~~~~l~----ga~~--~~~~~l~~l~~----~-~~~~lIiitg-~s~~ 148 (346)
T TIGR03576 95 --------------GRKVVHYLPEKPAHPSIPRSCKLA----GAEY--FESDELSELKK----I-DGTSLVVITG-STMD 148 (346)
T ss_pred --------------CCEEEECCCCCCCchhHHHHHHHc----CCEE--eccCCHHHHhh----C-cCceEEEEEC-CCCC
Confidence 67776 4578999999999988 7765 44567666432 1 2567777765 6999
Q ss_pred CCc---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 266 GDF---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 266 G~~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
|++ .||++|+++|++||++||+||||+.|+.|..|.+.+..+ ++||+++||||++ |..|||++++
T Consensus 149 G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~----~~divv~s~SKalaG~r~G~v~~~ 217 (346)
T TIGR03576 149 LKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDL----GADLVVTSTDKLMDGPRGGLLAGR 217 (346)
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHc----CCcEEEeccchhccccceEEEEeC
Confidence 998 689999999999999999999999987665455443333 3579999999999 7889999875
No 24
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=1e-26 Score=229.67 Aligned_cols=193 Identities=20% Similarity=0.247 Sum_probs=153.2
Q ss_pred EeecCccCCCCCCHHHHHHH-----HHhcCCCCccccccCchHHHHHHHH----HHHhHhCCCcEEE-eccHHHHHHHHH
Q 019931 113 LFSGNDYLGLSSHPTIAKAA-----ARHGMGPRGSALICGYTNYHRLLES----CLADLKKKEDCLL-CPTGFAANMAVI 182 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~-----~~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e~alv-~~sG~~An~~ai 182 (334)
+++||||+ ||++++++ .+|+.|++++|++.| .+.+++||+ ++++++|.+++++ ++||++||.+++
T Consensus 33 l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l 107 (416)
T PRK13034 33 LIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVY 107 (416)
T ss_pred ecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHH
Confidence 46888997 99999943 678999999999999 588999999 9999999999976 489999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~l 255 (334)
.+++++ ||.|+++...|++ +..+++.+......+...|++ .|+++|+++++.. ++++
T Consensus 108 ~al~~~--------------GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~kl 171 (416)
T PRK13034 108 LALLKP--------------GDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH--KPKL 171 (416)
T ss_pred HHhcCC--------------CCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc--CCeE
Confidence 998764 8999999999998 566665431110112245655 6999999998652 5678
Q ss_pred EEE-cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEee
Q 019931 256 VVT-DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIAC 333 (334)
Q Consensus 256 Vv~-e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~ 333 (334)
|++ +++++ ...|+++|.++|++||++||+|+||++|+++. |. +.+...++|++++|++|++ |+.||+|++
T Consensus 172 Vi~~~~~~g---~~~dl~~l~~la~~~g~~livD~Aha~G~~~~---g~--~~~~~~~~Di~~~s~~K~l~g~~GG~v~~ 243 (416)
T PRK13034 172 IIAGFSAYP---RELDFARFREIADEVGALLMVDMAHIAGLVAA---GE--HPNPFPHAHVVTTTTHKTLRGPRGGMILT 243 (416)
T ss_pred EEECCCccc---cccCHHHHHHHHHHcCCEEEEeCcccccCccc---CC--CCCCCCCceEEEEeCcccCCCCCCeEEEE
Confidence 877 45554 46789999999999999999999999998863 32 2222245899999999999 678999876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 244 ~ 244 (416)
T PRK13034 244 N 244 (416)
T ss_pred C
Confidence 3
No 25
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.95 E-value=2.1e-26 Score=225.96 Aligned_cols=205 Identities=22% Similarity=0.216 Sum_probs=157.0
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+| ++|||+ +||+|.+|+.+. ........ ...++.+.+|+++|+++.+.+++++++||++||.
T Consensus 30 ~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e 106 (397)
T TIGR03246 30 WDQQGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGN--GYTNEPVLRLAKKLVDATFADKVFFCNSGAEANE 106 (397)
T ss_pred EeCCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHH
Confidence 4577899999998 699999 599999977543 22211111 1235778999999999998889999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++.+..- +.. +..+++.++|..+..+|+++..++.++... ....+..++|+|+++|++++.+
T Consensus 107 ~Alk~ar~~----~~~-~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 178 (397)
T TIGR03246 107 AALKLARRY----ALD-KHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISD--- 178 (397)
T ss_pred HHHHHHHHH----HHh-cCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhcc---
Confidence 999965321 000 000135788999999999988777665210 0124567899999999999964
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
++++|++|+++++.|.+.| |++|+++|++||++||+||+| .|+ |++|.+++ +++++.| ||+ ||||++|
T Consensus 179 ~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~-Gr~G~~~a~~~~gv~p--Di~--t~~K~lg 251 (397)
T TIGR03246 179 KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGV-GRTGELYAYMHYGVTP--DIL--TSAKALG 251 (397)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcC-CccccchhhhhcCCCC--CEE--Eeehhhh
Confidence 6899999999999996543 999999999999999999999 574 99998764 6788766 555 8999997
No 26
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=2.4e-26 Score=230.07 Aligned_cols=177 Identities=23% Similarity=0.234 Sum_probs=136.8
Q ss_pred HHhcCCCCccccccCchHHHHHHHH----HHHhHhCC-CcEEEe----ccHHHHHHHHHHHHhhhhhhccCCCccCCCCC
Q 019931 133 ARHGMGPRGSALICGYTNYHRLLES----CLADLKKK-EDCLLC----PTGFAANMAVIVAVGNIASLLAGDEKSFKDEK 203 (334)
Q Consensus 133 ~~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~-e~alv~----~sG~~An~~ai~al~~~~~~~~~~~~~~~~~g 203 (334)
++|+.|++++|++.|+. .++++|+ +..++++. +.++++ +||+.||++++.+|+++ |
T Consensus 60 ~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~p--------------g 124 (475)
T PLN03226 60 NKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQP--------------H 124 (475)
T ss_pred ccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCC--------------C
Confidence 68999999999999986 8899997 33344554 445545 89999999999999875 8
Q ss_pred eEEEEcC------CCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEE-cCCCCCCCCccC
Q 019931 204 IAIFSDA------LNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVT-DSLFSMDGDFAP 270 (334)
Q Consensus 204 d~Vl~d~------~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~-e~v~n~~G~~~p 270 (334)
|.|+.+. ++|++..++.+++......++++|.|+ |+++|++++.+. ++++|++ +++|++ ..|
T Consensus 125 D~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~S~~s~---~~D 199 (475)
T PLN03226 125 DRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGASAYPR---DWD 199 (475)
T ss_pred CEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEecCcCCC---ccC
Confidence 8899854 678888777766621111233477887 999999999753 4555544 888877 456
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+++|.++|+++|++|++|+||++|+++..+.. ...+++|++++|++|+| |+.||+|+++
T Consensus 200 ~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-----~p~~~~Div~~t~hK~L~GP~Gg~I~~~ 259 (475)
T PLN03226 200 YARMRKIADKVGALLMCDMAHISGLVAAQEAA-----SPFEYCDVVTTTTHKSLRGPRGGMIFFR 259 (475)
T ss_pred HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC-----CCCCCCeEEEecCcccccCCCceEEEEc
Confidence 77899999999999999999999998764422 12246899999999999 8899999874
No 27
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=5.5e-26 Score=217.77 Aligned_cols=209 Identities=22% Similarity=0.304 Sum_probs=164.3
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An 178 (334)
+|++||+||||.++ +.||. +||.+++|+++. ..-...|++++ ++...+|.++|++..+ .++++++|||++||
T Consensus 37 ~D~~G~~YlDf~~Giav~~lGH-~hP~iv~al~~Q~~kl~h~sn~~~--~~~~~~la~~L~~~s~~~d~vff~NSGaEA~ 113 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLGH-CHPALVEALKEQAEKLWHVSNLFY--NEPQAELAEKLVELSPFADRVFFCNSGAEAN 113 (404)
T ss_pred ECCCCCEeeeeccceeeeccCC-CCHHHHHHHHHHHHHhhhcccccC--ChHHHHHHHHHHhhCccccEEEEcCCcHHHH
Confidence 57888999999885 55777 599999988653 33334566665 6888999999999996 89999999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~ 250 (334)
.++|+...+- +. ..++..+|.+...+|+-+...+.+.... .-..+..++.||++++++++.+
T Consensus 114 EaAiKlARk~----~~----~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~-- 183 (404)
T COG4992 114 EAALKLARKY----TG----DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE-- 183 (404)
T ss_pred HHHHHHHHHH----cC----CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc--
Confidence 9999964432 11 0124578888999998776555544211 0123556788999999999986
Q ss_pred CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
+|..|++|++....|.++| |+++++||++||++||+||+|+. +||+|+.++ +|+++.|| |+ |++|++|
T Consensus 184 -~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG--~GRTGk~fA~e~~gV~PD--I~--tlaK~Lg 256 (404)
T COG4992 184 -DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG--LGRTGKLFAYEHYGVEPD--IL--TLAKALG 256 (404)
T ss_pred -CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC--CCccchHHHHHHhCCCCC--EE--Eeecccc
Confidence 8999999999999998766 89999999999999999999994 899999884 79999985 55 8999997
Q ss_pred C---CccEEe
Q 019931 326 C---QGGFIA 332 (334)
Q Consensus 326 ~---~GG~i~ 332 (334)
+ +|++++
T Consensus 257 GG~PigA~la 266 (404)
T COG4992 257 GGFPIGAMLA 266 (404)
T ss_pred CCccceeeEE
Confidence 4 455554
No 28
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=5.1e-25 Score=214.11 Aligned_cols=184 Identities=17% Similarity=0.105 Sum_probs=155.2
Q ss_pred CHHHHHHHHHhcCCCCccccccCch-----HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccC
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYT-----NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSF 199 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~-----~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~ 199 (334)
....++++++|+.|++++|+..|+. +.+.++++++|+++|.+.++++++|+++|..++.+++.+
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~----------- 89 (370)
T TIGR02539 21 TEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKE----------- 89 (370)
T ss_pred cHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCC-----------
Confidence 4566778999999999888887765 355778888999999999999999999999999998764
Q ss_pred CCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCC----CCcEEEEEcCCCCCCCCc
Q 019931 200 KDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCT----MRKKVVVTDSLFSMDGDF 268 (334)
Q Consensus 200 ~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~----~~~~lVv~e~v~n~~G~~ 268 (334)
+|.|+++.+.|.+++.+++.. +++++.++++ |+++|++++++.+ .++++|++++++|++|++
T Consensus 90 ---gd~Vl~~~~~h~s~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~ 162 (370)
T TIGR02539 90 ---GDWVVLDGLAHYTSYVAAERA----GLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL 162 (370)
T ss_pred ---CCEEEECCcccHHHHHHHHHc----CCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc
Confidence 789999999999988887766 8999999986 8999999986421 257899999999999999
Q ss_pred cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--cEEeeC
Q 019931 269 APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG--GFIACR 334 (334)
Q Consensus 269 ~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G--G~i~~~ 334 (334)
.|+++|.++|++||++||+|+||+.|.++..+. ..++|++++||||++|+.| ||++++
T Consensus 163 ~~l~~i~~la~~~~~~livDea~~~g~~~~~~~--------~~~~di~v~s~sK~~~~~g~~G~l~~~ 222 (370)
T TIGR02539 163 PDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAK--------EIGADFIVGSGHKSMAASGPCGVLGMS 222 (370)
T ss_pred cCHHHHHHHHHHcCCeEEEECccccCCcCCCHH--------HcCCCEEEeeCcccccCCCCEEEEEEC
Confidence 999999999999999999999999875443221 2246899999999998767 888764
No 29
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.3e-24 Score=213.21 Aligned_cols=205 Identities=21% Similarity=0.245 Sum_probs=154.1
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+| ++|||++ ||+|.+++.+.. .....+... .++...+|.++|++..+.+++++++||++||.
T Consensus 31 ~d~dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e 107 (395)
T PRK03715 31 YDHNGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPSPAF--YNEPMAKLAGLLTQHSCFDKVFFANSGAEANE 107 (395)
T ss_pred EECCCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHhhccCCCEEEEeCCcHHHHH
Confidence 4577899999987 7899997 799999876542 221122211 24555677777776655678999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++.+.... . +-.+++.++|..+..+|+++..++.++.... ...+...+++|+++|++++.+
T Consensus 108 ~Aik~ar~~~----~--~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 178 (395)
T PRK03715 108 GAIKLARKWG----R--KHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD--- 178 (395)
T ss_pred HHHHHHHHHh----h--ccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC---
Confidence 9999765310 0 0011346788899999999988887763110 001223346899999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++++.|.+.| +++|+++|++||++||+||+|+ | +|++|++++ +++++.| || .||+|++|.
T Consensus 179 ~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~gv~P--Di--~t~gK~lg~ 252 (395)
T PRK03715 179 KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSGIEP--DI--MTLGKGIGG 252 (395)
T ss_pred CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcCCCC--ce--eeehhhhhC
Confidence 6889999999999999887 9999999999999999999999 6 899999874 7889876 55 489999975
No 30
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=1.8e-24 Score=212.59 Aligned_cols=213 Identities=20% Similarity=0.208 Sum_probs=156.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+++ +|||+ +||+|.+++.+.- .+.. .... ..++.+.+|+++|+++.+.+++++++||++||.
T Consensus 35 ~d~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e 111 (403)
T PRK05093 35 WDQQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWH-ISNV-FTNEPALRLAKKLIDATFAERVFFANSGAEANE 111 (403)
T ss_pred EeCCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCc-ccCc-cCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHH
Confidence 45778999999995 89999 8999999775432 2221 1222 235667899999999988889999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh--------cCCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER--------TKMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~--------~~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++.+... +. .+...++..+|..+..+|+++...+.+... ....+++.++++|++++++++.+
T Consensus 112 ~a~klar~~----~~-~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 183 (403)
T PRK05093 112 AAFKLARRY----AC-DRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDD--- 183 (403)
T ss_pred HHHHHHHHH----Hh-hcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcC---
Confidence 999954321 00 000013567888999999997755543210 01234677899999999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++++.|...| +++|+++|++||+++|+||+|+ | +|++|.++. +++++.| | +.||||++++
T Consensus 184 ~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~~~~p--d--i~s~sK~l~~ 257 (403)
T PRK05093 184 HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-G-MGRTGDLFAYMHYGVTP--D--ILTSAKALGG 257 (403)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCccchhhhhcCCCC--C--EEEecccccC
Confidence 6899999999998887654 9999999999999999999999 5 677776543 4566655 4 4599999973
Q ss_pred --CccEEee
Q 019931 327 --QGGFIAC 333 (334)
Q Consensus 327 --~GG~i~~ 333 (334)
..|++++
T Consensus 258 G~rig~vv~ 266 (403)
T PRK05093 258 GFPIGAMLT 266 (403)
T ss_pred CcceEEEEE
Confidence 1255544
No 31
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.92 E-value=4.4e-24 Score=209.63 Aligned_cols=209 Identities=19% Similarity=0.167 Sum_probs=153.9
Q ss_pred cccceeEEEeecCccCCCC---CCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHH
Q 019931 105 ARQFKRLLLFSGNDYLGLS---SHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMA 180 (334)
Q Consensus 105 ~~~g~~~l~f~sn~yLgl~---~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ 180 (334)
+.+|++||||+|+ |+++. .||+|++|+.+. ......++.. .++.+.+|+++|+++++.+.+++++||++||.+
T Consensus 33 ~~~g~~~lD~~s~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ 109 (401)
T TIGR01885 33 DVEGKRYLDFLSA-YSAVNQGHCHPKIVKALTEQAQKLTLSSRAF--YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVET 109 (401)
T ss_pred eCCCCEEEEcccC-HhhccCCCCCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHH
Confidence 4567999999995 88777 499999977543 2122233322 468889999999999998999999999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcC-CCchhhHHHHHHhhhc-----CC---cEEEEeeCCCHHHHHHHHhcCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDA-LNHASIIDGIRIAERT-----KM---VEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~-~~H~s~~~g~~ls~~~-----~g---~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
+++.+...... ..+ .. .+++.|+++. .+|+++..++.++... .+ ..+..++|+|+++||+++++..+
T Consensus 110 ai~~a~~~~~~-~~~--~~-~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 185 (401)
T TIGR01885 110 AIKLARKWGYK-VKG--IP-ENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGP 185 (401)
T ss_pred HHHHHHHHhhh-hcC--CC-CCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCC
Confidence 99976432100 000 00 1245566554 5688888888765210 01 24577899999999999975444
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+..+|++|++++++|.+.| |++|+++|++||+++|+||+|. | +|++|.+++ +++++.+ |++ +|||++++
T Consensus 186 ~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-~g~~G~~~~~~~~~~~~--di~--~~gK~l~~ 259 (401)
T TIGR01885 186 NVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-LGRTGKLLCVDHENVKP--DIV--LLGKALSG 259 (401)
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHHhhcCCCC--CEE--EeeccccC
Confidence 6789999999999999887 9999999999999999999995 6 788888764 4455544 555 68999974
No 32
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.92 E-value=3.1e-24 Score=211.27 Aligned_cols=205 Identities=18% Similarity=0.179 Sum_probs=152.8
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||.+ ++|||++ ||+|++|+.+. ......+. ...++.+.+|+++|+++.+.+++++++||++||.
T Consensus 34 ~d~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e 110 (406)
T PRK12381 34 WDQQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDATFADRVFFCNSGAEANE 110 (406)
T ss_pred EeCCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccC--ccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHH
Confidence 4677899999988 6899997 99999977553 22211111 1235777899999999988889999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++..... +. ++-.+++..+|..+..+|+.....+.++... ....+..++++|+++|++++.+
T Consensus 111 ~Alk~ar~~----~~-~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 182 (406)
T PRK12381 111 AALKLARKY----AH-DRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD--- 182 (406)
T ss_pred HHHHHHHHH----Hh-hcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC---
Confidence 999975321 00 0000124567778999999987666655211 0123566788999999999864
Q ss_pred CcEEEEEcCCCCCCCCcc----CHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 252 RKKVVVTDSLFSMDGDFA----PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~----pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
++++|++|+++++.|.+. ++++|+++|++||++||+||+|. | +|++|.+++ +++++.| |+ .||||++|
T Consensus 183 ~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~gr~G~~~~~~~~~v~p--Di--~t~sK~l~ 255 (406)
T PRK12381 183 QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-G-VGRTGELYAYMHYGVTP--DV--LTTAKALG 255 (406)
T ss_pred CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-C-CCCCcchhhhHhhCCCC--CE--EEehhhhh
Confidence 688999999999888543 38999999999999999999994 6 588887754 5677766 44 59999997
No 33
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.92 E-value=6.1e-24 Score=208.23 Aligned_cols=203 Identities=22% Similarity=0.246 Sum_probs=155.6
Q ss_pred hcccceeEEEeec-CccCCCC-CCHHHHHHHHHhc-CCCCcccccc--CchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 104 FARQFKRLLLFSG-NDYLGLS-SHPTIAKAAARHG-MGPRGSALIC--GYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~s-n~yLgl~-~~p~v~~a~~~~g-~g~~~sr~~~--G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
++.+|++||||++ ++|+++. +||+|++++.+.- .+ +++.. +.++.+.+|+++|+++++ .+.+++++||++
T Consensus 31 ~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgse 107 (413)
T cd00610 31 YDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL---THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTE 107 (413)
T ss_pred EeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC---cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHH
Confidence 3467799999988 4666666 8999999775432 22 22333 357889999999999998 788999999999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCC-----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHC----------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~----------- 237 (334)
||..+++++... ++++.+|+.+..+|++....+.++... ...+++.++++
T Consensus 108 a~~~al~~~~~~-----------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 108 AVEAALKLARAY-----------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred HHHHHHHHHHHH-----------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 999999976531 124667778889999988777665211 01246678887
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERD 312 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~ 312 (334)
|+++|++++++.+.++++|+++++++++|.+.| +++|.++|++||++||+||+|+ | +|+.|.+. .+++++.+
T Consensus 177 d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g-~g~~g~~~~~~~~~~~~- 253 (413)
T cd00610 177 DLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-G-FGRTGKMFAFEHFGVEP- 253 (413)
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCcchhhHhhcCCCC-
Confidence 899999998764446789999999999999887 9999999999999999999998 4 56667654 34566544
Q ss_pred ccEEEecCcccccC
Q 019931 313 VDICVGTLSKAAGC 326 (334)
Q Consensus 313 ~Div~~SlsKa~G~ 326 (334)
|+ .||||++++
T Consensus 254 -d~--~t~sK~l~~ 264 (413)
T cd00610 254 -DI--VTLGKGLGG 264 (413)
T ss_pred -Ce--EEEcccccC
Confidence 44 489999986
No 34
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=7.3e-24 Score=206.03 Aligned_cols=208 Identities=22% Similarity=0.255 Sum_probs=156.8
Q ss_pred hcccceeEEEeecCc---cCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGND---YLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+||+ |||+ +||+|++++.+. ......+.. ...+...+|++++++..+.+.+++++||++||.
T Consensus 24 ~d~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~ 100 (377)
T PRK02936 24 TDNNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHVSNL--FTNSLQEEVASLLAENSAGDLVFFCNSGAEANE 100 (377)
T ss_pred EeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHH
Confidence 357789999999997 9998 899999977543 222222222 235777888888888777778999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++..... ++++++|..+..+|+++..++.++.... ...+..++++|+++|++++.+
T Consensus 101 ~A~~~a~~~-----------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 166 (377)
T PRK02936 101 AALKLARKH-----------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE--- 166 (377)
T ss_pred HHHHHHHHh-----------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC---
Confidence 999854321 1346788899999999888877652110 013456788999999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++++.|...+ +++|+++|++||+++|+||+|. | +|++|.++. +++++.+ |+ .||||+++.
T Consensus 167 ~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g-~g~~g~~~~~~~~~~~~--di--~t~sK~l~~ 240 (377)
T PRK02936 167 EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-G-IGRTGTLFAYEQFGLDP--DI--VTVAKGLGN 240 (377)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhhCCCC--cE--EEEcccccC
Confidence 6899999999999886643 9999999999999999999996 6 688887653 4566655 44 489999984
Q ss_pred --CccEEeeC
Q 019931 327 --QGGFIACR 334 (334)
Q Consensus 327 --~GG~i~~~ 334 (334)
.+|+++++
T Consensus 241 G~~ig~v~~~ 250 (377)
T PRK02936 241 GIPVGAMIGK 250 (377)
T ss_pred CCccEEEEEc
Confidence 24777653
No 35
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=1e-23 Score=206.83 Aligned_cols=215 Identities=17% Similarity=0.134 Sum_probs=156.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||.++ ..||. +||+|.+|+.+. ......++.. .++.+.+|+++|+++.+.+++++++||++||.
T Consensus 35 ~d~~G~~~lD~~~g~~~~~lGh-~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e 111 (396)
T PRK04073 35 KDPEGNRYMDMLSAYSAVNQGH-RHPKIIQALKDQADKVTLTSRAF--HSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVE 111 (396)
T ss_pred EECCCCEEEEcCCCHHhccCCC-CCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhcCCCCeEEEcCChHHHHH
Confidence 45778999999775 34666 589999977542 2222223322 35778999999999998889999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---C-----CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---K-----MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~-----g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++.+..-....+ + ..+++.++|.++..+|+.+...+.++... . -..+..++++|+++|++++.+
T Consensus 112 ~Alk~a~~~~~~~~-g--~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--- 185 (396)
T PRK04073 112 TAIKAARRWAYDVK-G--VEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP--- 185 (396)
T ss_pred HHHHHHHHHhhhcc-C--CCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhccc---
Confidence 99997543100000 0 00234678888999999987777665210 0 012456788899999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++|++|.+.| |++|+++|++||++||+||+|+ | +|++|..++ +++++.| |++ +|||++|+
T Consensus 186 ~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g-~g~~g~~~~~~~~~~~p--di~--~~sK~lg~ 259 (396)
T PRK04073 186 NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-G-LGRTGKLFACDWDNVTP--DMY--ILGKALGG 259 (396)
T ss_pred CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-C-CCcCcHHHHhhhcCCCC--CEE--EecccccC
Confidence 6899999999999999876 8999999999999999999999 4 688776553 4556555 554 79999986
Q ss_pred Cc---cEEee
Q 019931 327 QG---GFIAC 333 (334)
Q Consensus 327 ~G---G~i~~ 333 (334)
.| |++++
T Consensus 260 gg~~ig~~~~ 269 (396)
T PRK04073 260 GVFPISCVAA 269 (396)
T ss_pred CCCcceEEEE
Confidence 43 66665
No 36
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=2.8e-23 Score=202.94 Aligned_cols=213 Identities=18% Similarity=0.160 Sum_probs=155.2
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+| +.+||+ +||+|.+|+.+. ..+...+.. ..++.+.+|+++|+++.+.+++++++||++||.
T Consensus 26 ~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~ 102 (389)
T PRK01278 26 IDEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENSFADKVFFTNSGAEAVE 102 (389)
T ss_pred EECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHH
Confidence 4677899999998 579999 799999977543 222222222 246888999999999988888999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++..-. ..++ .+++..+|..+..+|+.....+.+..... ...+..++++|++++++++++
T Consensus 103 ~al~~ar~~~--~~~G---~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 174 (389)
T PRK01278 103 CAIKTARRYH--YGKG---HPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP--- 174 (389)
T ss_pred HHHHHHHHHH--HhcC---CCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC---
Confidence 9999764310 0011 01235788889999998776665432100 012334677899999999864
Q ss_pred CcEEEEEcCCCCCCCCcc----CHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFA----PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~----pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++|++|... ++++|+++|++||++||+||+|+ | +|++|.++. +++++.+ |+ .||||++++
T Consensus 175 ~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~~~~p--di--~t~sK~l~~ 248 (389)
T PRK01278 175 NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-G-MGRTGKLFAHEWAGVTP--DI--MAVAKGIGG 248 (389)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCCcceeecccCCCC--CE--EEEehhccC
Confidence 789999999999998544 48999999999999999999998 5 678787653 4567655 44 589999973
Q ss_pred --CccEEee
Q 019931 327 --QGGFIAC 333 (334)
Q Consensus 327 --~GG~i~~ 333 (334)
..|++++
T Consensus 249 G~~ig~~~~ 257 (389)
T PRK01278 249 GFPLGACLA 257 (389)
T ss_pred CcceEEEEE
Confidence 2345544
No 37
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=3.2e-23 Score=203.04 Aligned_cols=205 Identities=20% Similarity=0.231 Sum_probs=153.6
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~ 176 (334)
++.+|++||||++ +++||. +||+|++++.+.-. ....+.. +. .+...+|+++|+++++. +++++++||++
T Consensus 38 ~d~dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~~-~~-~~~~~~la~~l~~~~~~~~~~~v~~~~sgse 114 (398)
T PRK03244 38 WDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSNL-FA-TEPQIALAERLVELLGAPEGGRVFFCNSGAE 114 (398)
T ss_pred EECCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccCc-cC-CHHHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence 3567799999998 688998 69999997754321 1111111 22 35568999999999875 47888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhc
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~ 248 (334)
|+..+++.+..+ ++.++|..+..+|+.....+.+.... .+.++..++++|+++|++++.+
T Consensus 115 a~~~al~~~~~~------------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 182 (398)
T PRK03244 115 ANEAAFKLARLT------------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD 182 (398)
T ss_pred HHHHHHHHHHHH------------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC
Confidence 999999976654 24578888888998877666443210 0134566788899999998853
Q ss_pred CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa 323 (334)
++++|++|+++|++|.+.| +++|+++|++||++||+||+|+ | +|++|.++ .+++++.| |+ .||||+
T Consensus 183 ---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g-~gr~g~~~~~~~~~~~p--Di--~t~sK~ 253 (398)
T PRK03244 183 ---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-G-IGRTGAWFAHQHDGVTP--DV--VTLAKG 253 (398)
T ss_pred ---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CcccchHHhhhhhCCCC--CE--EEEchh
Confidence 6899999999999999887 8999999999999999999998 5 78888765 34567666 44 489999
Q ss_pred ccC---CccEEe
Q 019931 324 AGC---QGGFIA 332 (334)
Q Consensus 324 ~G~---~GG~i~ 332 (334)
+|. .|++++
T Consensus 254 l~~G~~ig~~~~ 265 (398)
T PRK03244 254 LGGGLPIGACLA 265 (398)
T ss_pred hhCCcccEEEEE
Confidence 984 444443
No 38
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.91 E-value=4.3e-23 Score=202.34 Aligned_cols=215 Identities=18% Similarity=0.142 Sum_probs=154.4
Q ss_pred hcccceeEEEeecCccCCCC---CCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGNDYLGLS---SHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~yLgl~---~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+++ |.++. +||+|++++.+. .....+++... ++.+.+||++|+++.+.+++++++||++||+
T Consensus 36 ~d~~g~~~lD~~~~-~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e 112 (401)
T PRK00854 36 WDTDGNRYLDCLSA-YSAVNQGHCHPKILAAMVEQAGRLTLTSRAFR--NDQLAPLYEELAALTGSHKVLPMNSGAEAVE 112 (401)
T ss_pred EECCCCEEEEcCcc-hhhccCCCCCHHHHHHHHHHHhhccccccccC--CHHHHHHHHHHHhhCCCCEEEEeCCcHHHHH
Confidence 34677999998775 55444 389999976543 22222333332 4777999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh--------hcCCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE--------RTKMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~--------~~~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++++...+...+ ...+++.++|.++..+|+++...+.++. ......+..++++|+++|++++.+
T Consensus 113 ~al~~a~~~~~~~~---g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~--- 186 (401)
T PRK00854 113 TAIKAVRKWGYEVK---GVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITP--- 186 (401)
T ss_pred HHHHHHHHHHHhcc---CCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCC---
Confidence 99998754210000 0011235778888889998765543221 001235677899999999999864
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++|++|.+.| |++|+++|++||++||+||+|+ | +|++|.++. +++++.+ |++ +++|+++.
T Consensus 187 ~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~~~g~~~--D~~--~~~K~l~g 260 (401)
T PRK00854 187 NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEEHEGIEA--DVT--LIGKALSG 260 (401)
T ss_pred CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHhhcCCCC--CEE--EecccccC
Confidence 7899999999999999887 9999999999999999999997 5 677776553 3556655 555 46799953
Q ss_pred ---CccEEee
Q 019931 327 ---QGGFIAC 333 (334)
Q Consensus 327 ---~GG~i~~ 333 (334)
.+|+|++
T Consensus 261 g~~~ig~v~~ 270 (401)
T PRK00854 261 GFYPVSAVLS 270 (401)
T ss_pred CccCeEEEEE
Confidence 2455665
No 39
>PRK12403 putative aminotransferase; Provisional
Probab=99.91 E-value=6e-23 Score=205.18 Aligned_cols=218 Identities=21% Similarity=0.191 Sum_probs=153.2
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.++ ..||+ +||+|++|+++. ......++...+.++.+.+|+++|+++++ .+++++++||++
T Consensus 48 l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 126 (460)
T PRK12403 48 LWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSE 126 (460)
T ss_pred EEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 457889999998764 45899 689999977543 22222344445667889999999999987 468999999999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----C---cEEEEee------CC-C----
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----M---VEVFVYK------HC-D---- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----g---~~v~~~~------~~-D---- 238 (334)
||.++++.+..-.. .+ +. .++..+|.....+|+++..++.++.... + ..+..++ ++ +
T Consensus 127 A~e~AiklAr~~~~-~~-g~---~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (460)
T PRK12403 127 ANEVLIRTVRRYWQ-VL-GK---PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPA 201 (460)
T ss_pred HHHHHHHHHHHHHH-hh-CC---CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChH
Confidence 99999997643100 00 00 0012233345678999888887653110 0 0011211 11 1
Q ss_pred ------HHHHHHHHhc-CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cc
Q 019931 239 ------MSHLKTLLSC-CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQ 306 (334)
Q Consensus 239 ------~~~Le~~l~~-~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~ 306 (334)
+++|++.+.+ ...+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.+++ ++
T Consensus 202 ~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-G-fGRtG~~~a~e~ 279 (460)
T PRK12403 202 EFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-G-FGRTGEWFAHEH 279 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCchhhhhhh
Confidence 3567666543 2246779999999999999887 9999999999999999999996 4 899999876 78
Q ss_pred cCCCCCccEEEecCccccc----CCccEEe
Q 019931 307 FNCERDVDICVGTLSKAAG----CQGGFIA 332 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G----~~GG~i~ 332 (334)
+++.| ||+ +|+|++| +.||+++
T Consensus 280 ~gv~P--Div--~~gK~lggG~~Piga~v~ 305 (460)
T PRK12403 280 FGFEP--DTL--SIAKGLTSGYVPMGGLVL 305 (460)
T ss_pred cCCCC--CeE--EEcccccccccceEEEEE
Confidence 99987 566 6999997 3566664
No 40
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=7.7e-23 Score=200.23 Aligned_cols=216 Identities=19% Similarity=0.209 Sum_probs=156.8
Q ss_pred hcccceeEEEeecCccCCCC---CCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGNDYLGLS---SHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~yLgl~---~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+++ |.++. +||+|++++.+. ......++.+ .++.+.++|+.++++.+.+.+++++||++||.
T Consensus 26 ~d~dg~~~lD~~~~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 26 WDVEGKKYYDFLSA-YSAVNQGHCHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGE 102 (400)
T ss_pred EeCCCCEEEEcccC-HhhccCCcCCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHH
Confidence 35678999999985 66555 699999977543 2222233433 25688999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
++++.+...+. +. ....+++..+|..+..+|+.+...+.+..... ...+..++++|+++||++++. +
T Consensus 103 ~al~~~~~~~~--~~-~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~ 177 (400)
T PTZ00125 103 TALKFARKWGY--EV-KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD--P 177 (400)
T ss_pred HHHHHHHHHHH--hc-cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--C
Confidence 99997643100 00 00001246788899999999888776552100 012456788999999999962 3
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|+++|++|.+.| +++|.++|++||++||+||+|+ | +|++|.++. ++.++.+ |++ +|||+++.
T Consensus 178 ~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g-~g~~G~~~~~~~~~~~p--d~~--~~sK~l~~ 251 (400)
T PTZ00125 178 NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-G-LGRTGKLLAHDHEGVKP--DIV--LLGKALSG 251 (400)
T ss_pred CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCccchhhHHHhcCCCC--CEE--EEcccccC
Confidence 6899999999999999888 9999999999999999999996 4 677777653 3455544 555 68999974
Q ss_pred Cc---cEEee
Q 019931 327 QG---GFIAC 333 (334)
Q Consensus 327 ~G---G~i~~ 333 (334)
.+ |++++
T Consensus 252 g~~~ig~v~~ 261 (400)
T PTZ00125 252 GLYPISAVLA 261 (400)
T ss_pred CCcCcEEEEE
Confidence 22 55654
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=1.3e-22 Score=198.34 Aligned_cols=199 Identities=15% Similarity=0.099 Sum_probs=163.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCcc-----ccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGS-----ALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~s-----r~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
.+++|+-.-.-+|- -++++++|+++|+.+.+++ ++..+..+.++++|+++|+++|.+.++++++|++||..++.
T Consensus 18 ~~~~~~~~~~~~~p-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~ 96 (387)
T PRK09331 18 EEFINLDPIQRGGI-LTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMH 96 (387)
T ss_pred ccccccChhhcCCC-CCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHH
Confidence 45667665555565 4788999999998765433 55666678899999999999999999999999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcC----CCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCC----TMR 252 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~----~~~ 252 (334)
+++++ ||.|+++...|.+...+++.. |++++.+++ .|++++++.+++. .++
T Consensus 97 ~l~~~--------------gd~Vlv~~~~h~s~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 158 (387)
T PRK09331 97 SLCKK--------------GDYVVLDGLAHYTSYVAAERA----GLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKP 158 (387)
T ss_pred HhcCC--------------CCEEEECCCchHHHHHHHHHc----CCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCC
Confidence 88764 888999999999998887766 888888876 4799999998742 136
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC--ccE
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ--GGF 330 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~--GG~ 330 (334)
+++|++++++|++|.+.|+++|.++|++||+++++|++|+.|.++..+. ..++|++++|++|++++. +||
T Consensus 159 ~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~--------~~g~D~~~~s~~K~l~~~~~~G~ 230 (387)
T PRK09331 159 PALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK--------KLGADFIVGSGHKSMAASAPSGV 230 (387)
T ss_pred CEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH--------HcCCCEEEeeCcccccCCCCEEE
Confidence 8999999999999999999999999999999999999999876543221 235789999999999763 378
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 231 l~~~ 234 (387)
T PRK09331 231 LATT 234 (387)
T ss_pred EEEC
Confidence 8764
No 42
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=1e-22 Score=202.14 Aligned_cols=204 Identities=18% Similarity=0.252 Sum_probs=146.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHh-C-CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLK-K-KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~-g-~e~alv~~sG~~A 177 (334)
++.+|++||||+++ .+||. +||+|.+|+.+. .....++.... .++.+.+|+++|++++ + .+.+++++||++|
T Consensus 38 ~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA 115 (433)
T PRK08117 38 YGVDGKEYLDFTSGIAVANVGH-RHPKVVQAIKEQADKLMHGPSGVI-YYESILKLAEELAEITPGGLDCFFFSNSGAEA 115 (433)
T ss_pred EeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHH
Confidence 45677999999885 56886 699999977543 22111111111 3577899999999998 3 3455666999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----CC-----cEEEEeeC------------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----KM-----VEVFVYKH------------ 236 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----~g-----~~v~~~~~------------ 236 (334)
|.++++.... .+++..+|..+..+|+++..++.+.... .. ..+..++.
T Consensus 116 ~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (433)
T PRK08117 116 IEGALKLAKH-----------VTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDP 184 (433)
T ss_pred HHHHHHHHHH-----------hcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 9999995332 2345678888999999987766443100 00 01111111
Q ss_pred -----CCHHHHHHHHhc--CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-
Q 019931 237 -----CDMSHLKTLLSC--CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA- 304 (334)
Q Consensus 237 -----~D~~~Le~~l~~--~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~- 304 (334)
+|+++|++++++ ...+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.+++
T Consensus 185 ~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-~gr~G~~~~~ 262 (433)
T PRK08117 185 EVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-FGRTGEWFAA 262 (433)
T ss_pred hHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-cCccccchhH
Confidence 256778888864 2246789999999999999988 9999999999999999999999 6 899998875
Q ss_pred cccCCCCCccEEEecCcccccC
Q 019931 305 EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+++++.| || .||||++|.
T Consensus 263 ~~~gv~p--Di--~t~sK~lg~ 280 (433)
T PRK08117 263 QTFGVVP--DI--MTIAKGIAS 280 (433)
T ss_pred hhcCCCC--CE--eehhhhccC
Confidence 6778776 44 599999984
No 43
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.90 E-value=1.2e-22 Score=204.95 Aligned_cols=211 Identities=18% Similarity=0.164 Sum_probs=150.2
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-C--CcEEEeccHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-K--EDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~--e~alv~~sG~~ 176 (334)
+|.+||+||||++ +.+||. +||+|++|+++. ......+.+..+.++...+|+++|.+++. . +.+++++||++
T Consensus 84 ~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsE 162 (504)
T PLN02760 84 YDINGKKYLDALAGLWCTALGG-SEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSE 162 (504)
T ss_pred EECCCCEEEEcCcCHHhcccCC-CCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHH
Confidence 5788999999988 689995 699999977653 33332233334567888999999999853 2 46788899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC-----cEEEEeeC--------CC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM-----VEVFVYKH--------CD 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g-----~~v~~~~~--------~D 238 (334)
||.++++........ + + .+++.++|..+..+|+++..++.++... .+ .....+++ .+
T Consensus 163 A~e~AlKlAr~~~~~-~-g---~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 237 (504)
T PLN02760 163 ANDTQVKLVWYYNNA-L-G---RPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGET 237 (504)
T ss_pred HHHHHHHHHHHHHHh-c-C---CCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCc
Confidence 999999976421000 0 0 1134678889999999988887665210 00 11111111 01
Q ss_pred --------HHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c
Q 019931 239 --------MSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A 304 (334)
Q Consensus 239 --------~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~ 304 (334)
.++||+++... +.+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+. +|++|.++ .
T Consensus 238 ~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TG--fGRtG~~~a~ 315 (504)
T PLN02760 238 EEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICA--FGRLGTMFGC 315 (504)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhC--CcccchhhHH
Confidence 24577777532 235789999999999999888 99999999999999999999963 67777765 4
Q ss_pred cccCCCCCccEEEecCcccccC
Q 019931 305 EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+++++.|| | .||+|++|.
T Consensus 316 e~~gv~PD--i--vtlgK~lgg 333 (504)
T PLN02760 316 DKYNIKPD--L--VSLAKALSS 333 (504)
T ss_pred HhcCCCCc--E--EEecccccC
Confidence 78898874 4 489999963
No 44
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.1e-23 Score=199.85 Aligned_cols=216 Identities=21% Similarity=0.236 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCCCCCc
Q 019931 9 KWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSSGDEN 88 (334)
Q Consensus 9 ~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (334)
...|+++.++.++++.||...|++++|+
T Consensus 8 ~~~d~~i~~~i~~e~~rq~~~ieLIASE---------------------------------------------------- 35 (413)
T COG0112 8 ADYDPEIFEAIQQELERQREHIELIASE---------------------------------------------------- 35 (413)
T ss_pred HhcCHHHHHHHHHHHHHHhhceeeeecc----------------------------------------------------
Confidence 4467889999999999999999999887
Q ss_pred ceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHH-----HHHHhcCCCCccccccCchHHHHHHHHH----H
Q 019931 89 EIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAK-----AAARHGMGPRGSALICGYTNYHRLLESC----L 159 (334)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~-----a~~~~g~g~~~sr~~~G~~~~~~~LE~~----L 159 (334)
||.| |.|.+ .+++|..|.++.|++.|+ ++.+++|+. .
T Consensus 36 ------------------------N~~S---------~aV~~A~gS~ltnKYAEGyPgkRyYgGc-e~VD~vE~laiera 81 (413)
T COG0112 36 ------------------------NFTS---------PAVMEAQGSDLTNKYAEGYPGKRYYGGC-EYVDEVEELAIERA 81 (413)
T ss_pred ------------------------ccCC---------HHHHHHHhhhhhhccccCCCCccccCCC-eeHHHHHHHHHHHH
Confidence 5555 44444 457899999999999887 444666654 3
Q ss_pred HhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeCC
Q 019931 160 ADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKHC 237 (334)
Q Consensus 160 a~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~~ 237 (334)
.++||++.+-+. .||+.||++++.+|++| ||.|+...+.|+. +.++.+.+..+.-.+++.|+.+
T Consensus 82 k~LFga~~anVQPhSGs~AN~av~~All~p--------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd 147 (413)
T COG0112 82 KKLFGAEYANVQPHSGSQANQAVYLALLQP--------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVD 147 (413)
T ss_pred HHHhCCCccccCCCCchHHHHHHHHHHcCC--------------CCeEecccCCCCCcccCCCCCCccceeEEeEecccc
Confidence 448899999888 79999999999999986 8999988887765 4455444432223455556543
Q ss_pred ------CHHHHHHHHhcCCCCcEE-EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC
Q 019931 238 ------DMSHLKTLLSCCTMRKKV-VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE 310 (334)
Q Consensus 238 ------D~~~Le~~l~~~~~~~~l-Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~ 310 (334)
|+|++++++++. ++|+ |..-+.|+. ..|+++++++|++.|++|++|.||-.|++- .|. +.++.
T Consensus 148 ~et~~IDyD~~~k~a~e~--kPK~ii~G~SaY~r---~id~~~~reIad~VGA~L~~DmAHiaGLVA---~G~--~p~P~ 217 (413)
T COG0112 148 PETGLIDYDEVEKLAKEV--KPKLIIAGGSAYSR---PIDFKRFREIADEVGAYLMVDMAHVAGLIA---GGV--HPNPL 217 (413)
T ss_pred cccCccCHHHHHHHHHHh--CCCEEEECcccccc---ccCHHHHHHHHHHhCceEEehHHHHHHHHh---ccc--CCCCC
Confidence 999999999885 4554 556677766 889999999999999999999999999762 233 44666
Q ss_pred CCccEEEecCcccc-cCCccEEeeC
Q 019931 311 RDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 311 ~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+.+||+++|.+|+| |+.||+|+++
T Consensus 218 ~~AdvVTtTTHKTlrGPrGG~Il~~ 242 (413)
T COG0112 218 PHADVVTTTTHKTLRGPRGGIILTN 242 (413)
T ss_pred CccceEeCCcccCCCCCCceEEEec
Confidence 78999999999999 8899999874
No 45
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=5e-23 Score=204.51 Aligned_cols=196 Identities=18% Similarity=0.207 Sum_probs=132.3
Q ss_pred HHHhcCCCCccccccCchHHHHHHHH----HHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhh---hhc-cCCCcc----
Q 019931 132 AARHGMGPRGSALICGYTNYHRLLES----CLADLKKKEDCLLC-PTGFAANMAVIVAVGNIA---SLL-AGDEKS---- 198 (334)
Q Consensus 132 ~~~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e~alv~-~sG~~An~~ai~al~~~~---~~~-~~~~~~---- 198 (334)
..+|..|..+.|++.|+. ..+++|. +..++||++.+-+. .||+.||++++.++++|. ..| .+|++.
T Consensus 74 ~nkyaeg~pg~ryy~g~~-~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~ 152 (493)
T PRK13580 74 TDKYAEGTPGHRFYAGCQ-NVDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDL 152 (493)
T ss_pred cccCcCCCCCccccCCCc-hHHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhcccccccccc
Confidence 357888988889888874 4455554 44457899999777 799999999999998741 000 011000
Q ss_pred -------CCC--CCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 199 -------FKD--EKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 199 -------~~~--~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
.+. .||.|+.-.+.|+. +..+...+..........|+. .|++++++++++ .++.|++.+.+
T Consensus 153 ~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~---~~plvii~g~S 229 (493)
T PRK13580 153 TEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE---FKPLILVAGYS 229 (493)
T ss_pred chhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhh---cCCEEEEeCcc
Confidence 000 16788866554432 112211111111233444432 389999999986 44555555777
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+. +...|+++|+++|++||++|++|+||++|++| |.+..+.+++.+++||+++|++|+| |+.||+|+++
T Consensus 230 ~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~ 299 (493)
T PRK13580 230 AY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAK 299 (493)
T ss_pred cc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--cccchhhcCCCCCCcEEEeCChhhccCCCeEEEEec
Confidence 76 44889999999999999999999999999997 3333333444567999999999999 8899999874
No 46
>PLN02624 ornithine-delta-aminotransferase
Probab=99.89 E-value=5.3e-22 Score=199.13 Aligned_cols=212 Identities=17% Similarity=0.163 Sum_probs=151.3
Q ss_pred hhcccceeEEEeecCccCCCC---CCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLS---SHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAAN 178 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~---~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An 178 (334)
.++.+|++||||+|+ |..+. +||+|++|+++ .......++.+. ++...+|+++|+++++.+.+++++||++||
T Consensus 69 l~d~dG~~ylD~~sg-~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~L~~~~~~~~~~f~~SGseA~ 145 (474)
T PLN02624 69 IWDPEGKKYLDFLSA-YSAVNQGHCHPKIIKALTEQAEKLTLSSRAFY--NDKFPEFAEYLTSMFGYDMVLPMNTGAEGV 145 (474)
T ss_pred EEECCCCEEEEcccc-hhcccCCCCCHHHHHHHHHHHHhcCCcccccC--CHHHHHHHHHHHhhcCCCeEEEeCChHHHH
Confidence 357889999999885 44333 49999997754 222222232222 577789999999999989999999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~ 250 (334)
.++++.....+ .+. .....++..+|.....+|+.....+.++... ....+..++++|++.|+++++...
T Consensus 146 e~AlklAr~~~--~~~-~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 222 (474)
T PLN02624 146 ETAIKLARKWG--YEK-KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDG 222 (474)
T ss_pred HHHHHHHHHHH--Hhh-cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCC
Confidence 99998543210 000 0000012345667777898766655543210 011245678899999999997544
Q ss_pred CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
.+.++|++|++++++|.+.| |++|+++|++||++||+||+|+ | +|++|.++. +++++.| ||+ +|||++|
T Consensus 223 ~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G-~GrtG~~~a~~~~~i~p--Div--~lsK~lg 296 (474)
T PLN02624 223 DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-G-LARTGKMLACDWEEVRP--DVV--ILGKALG 296 (474)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-cCcCcchhhHHhcCCCC--CEE--Eeccccc
Confidence 46889999999999999888 9999999999999999999997 6 788888765 4566655 555 6899997
Q ss_pred C
Q 019931 326 C 326 (334)
Q Consensus 326 ~ 326 (334)
+
T Consensus 297 g 297 (474)
T PLN02624 297 G 297 (474)
T ss_pred C
Confidence 4
No 47
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.89 E-value=5.1e-22 Score=193.21 Aligned_cols=167 Identities=20% Similarity=0.114 Sum_probs=136.2
Q ss_pred cccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHH
Q 019931 142 SALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIR 221 (334)
Q Consensus 142 sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ 221 (334)
+.+.....+.+.+||+++++++|.+++++++||++|+..++.+++++ +|.|+++...|......+.
T Consensus 32 ~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~--------------gd~Vl~~~~~y~~~~~~~~ 97 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKA--------------GDHVVASDDLYGGTYRLFE 97 (369)
T ss_pred ceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCC--------------CCEEEECCCCcchHHHHHH
Confidence 44444456889999999999999999999999999999999988764 7888888877776554433
Q ss_pred HhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 222 IAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 222 ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
......++++..++++|++++++++++ ++++|++|+++||+|.+.|+++|.++|++||++||+|++|+.+++..
T Consensus 98 ~~~~~~g~~~~~v~~~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~--- 171 (369)
T cd00614 98 RLLPKLGIEVTFVDPDDPEALEAAIKP---ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQR--- 171 (369)
T ss_pred HHHhhcCeEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCC---
Confidence 211123788999999999999998864 68999999999999999999999999999999999999998875411
Q ss_pred ccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 302 GVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 302 g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
.+..++||++.|++|++|+ .||+|+++
T Consensus 172 ------~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~ 202 (369)
T cd00614 172 ------PLELGADIVVHSATKYIGGHSDVIAGVVVGS 202 (369)
T ss_pred ------hhhhCCcEEEeccceeccCCCCceEEEEEeC
Confidence 1223578999999999974 47888874
No 48
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.88 E-value=1.3e-21 Score=192.11 Aligned_cols=205 Identities=20% Similarity=0.242 Sum_probs=150.7
Q ss_pred hhcccceeEEEeecC-ccCCCC-CCHHHHHHHHHh-cCCC-CccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN-DYLGLS-SHPTIAKAAARH-GMGP-RGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn-~yLgl~-~~p~v~~a~~~~-g~g~-~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~ 175 (334)
.+|.+||+||||.+. +.+.+. +||+|++|++++ ..-. ..++..+ .+...++.++|.++... +.+++++||+
T Consensus 50 l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~--~e~~v~~ae~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 50 LYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLY--YEPYVELAEKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred EEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCccc--chhHHHHHHHHHHhCCcccCCeEEecCCcH
Confidence 356888999999884 444454 599999998764 2222 2233333 36678899999998764 4577889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---------CcEEEEeeCC---------
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---------MVEVFVYKHC--------- 237 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---------g~~v~~~~~~--------- 237 (334)
+||.++++.... .+++..+|..+..+|+.+...+.++.... ...++.++..
T Consensus 128 eA~E~AiKiAr~-----------~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~ 196 (447)
T COG0160 128 EAVEAAIKIARA-----------YTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGI 196 (447)
T ss_pred HHHHHHHHHHHH-----------HhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccC
Confidence 999999995433 34567888899999999988888764221 1113332211
Q ss_pred --------CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc
Q 019931 238 --------DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 238 --------D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g 302 (334)
..+.+|+.+... ..+...|++|++++..|.+.| |++|+++|++||++||+||+|+. +|++|+.
T Consensus 197 ~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG--~GRTG~~ 274 (447)
T COG0160 197 GGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG--FGRTGKM 274 (447)
T ss_pred chhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccccc
Confidence 133456644432 246789999999999998766 89999999999999999999994 8999988
Q ss_pred cc-cccCCCCCccEEEecCcccccC
Q 019931 303 VA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 303 ~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++ +|+++.| ||+ ||+|++|.
T Consensus 275 fa~E~~gv~P--Div--t~aK~ig~ 295 (447)
T COG0160 275 FAFEHFGVEP--DIV--TLAKSLGG 295 (447)
T ss_pred hhhhhcCCCC--CEE--EecccccC
Confidence 74 8999987 555 89999986
No 49
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.88 E-value=1.3e-21 Score=193.78 Aligned_cols=200 Identities=18% Similarity=0.202 Sum_probs=148.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++ .+||+ +||+|++++.+.- .+. . .....+...+|.++|+++. +.+++++++||++||
T Consensus 45 ~d~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~~~-~---~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~ 119 (426)
T PRK00062 45 YDVDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEKGL-S---FGAPTELEVELAELVIELVPSIEMVRMVNSGTEAT 119 (426)
T ss_pred EeCCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHhCC-c---CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHH
Confidence 45778999999886 68999 7999999776543 322 1 1223566688999999876 467788999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------cCC------cEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---------TKM------VEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~~g------~~v~~~~~~D~~~Le 243 (334)
.++++..... +++.++|..+..+|+........+.. ..+ .....++|+|+++++
T Consensus 120 e~Aik~a~~~-----------~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 188 (426)
T PRK00062 120 MSAIRLARGY-----------TGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVE 188 (426)
T ss_pred HHHHHHHHHH-----------hCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHH
Confidence 9999976542 23467888899999875322222100 001 124667889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~ 318 (334)
+++++...++++|++|++++++|.++| |++|+++|++||+++|+||+|+ |+ ++| .+..+++++.|+ | .
T Consensus 189 ~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~--r~g~~~~~~~~~~~pD--i--~ 261 (426)
T PRK00062 189 ELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GF--RVALGGAQGYYGVTPD--L--T 261 (426)
T ss_pred HHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-cc--ccCCccHHHHhCCCcc--h--H
Confidence 999754457889999999999999998 9999999999999999999998 53 333 344566777664 4 5
Q ss_pred cCcccccC
Q 019931 319 TLSKAAGC 326 (334)
Q Consensus 319 SlsKa~G~ 326 (334)
||||++|.
T Consensus 262 ~~gK~l~~ 269 (426)
T PRK00062 262 TLGKIIGG 269 (426)
T ss_pred hhhhHhhC
Confidence 89999974
No 50
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.88 E-value=2.3e-21 Score=192.57 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=153.4
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~ 176 (334)
.+|.+|++||||.++ ..||. +||+|.+|+.+ .......++.. .++...+|.++|+++.+. +.+++++||++
T Consensus 69 l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~Av~~ql~~l~~~~~~~--~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsE 145 (442)
T TIGR03372 69 LIDTQGNEFIDCLGGFGIFNVGH-RNPNVIAAVENQLAKQPLHSQEL--LDPLRALLAKTLAALTPGKLKYSFFCNSGTE 145 (442)
T ss_pred EEECCCCEEEECCccHHhhhcCC-CCHHHHHHHHHHHHhCCCccccc--CCHHHHHHHHHHHHhCCCCcCEEEEeCCchH
Confidence 467889999999876 34676 58999998755 33333333332 257778999999998753 46778899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---C-----CcEEEEeeCCCHHHHHHHHhc
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---K-----MVEVFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~-----g~~v~~~~~~D~~~Le~~l~~ 248 (334)
||.++++..... +. .+++..+|..+..+|+.....+.++... . ...+..++.+|.+.+++.+++
T Consensus 146 A~e~AlklAr~~----t~----~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~ 217 (442)
T TIGR03372 146 SVEAALKLAKAY----QS----PRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNE 217 (442)
T ss_pred HHHHHHHHHHHH----Hh----hcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHH
Confidence 999999954321 10 0134567778889999877666554210 0 122456677899998888864
Q ss_pred ---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecC
Q 019931 249 ---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTL 320 (334)
Q Consensus 249 ---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~Sl 320 (334)
...+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ .+++++.| ||+ ||
T Consensus 218 ~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~gv~P--Div--t~ 291 (442)
T TIGR03372 218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-G-MGRTGKMFACEHEGVQP--DIL--CL 291 (442)
T ss_pred HhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-C-CCccccchhhhhcCCCC--Cee--ee
Confidence 2246789999999999999888 9999999999999999999996 6 89999885 57889887 555 79
Q ss_pred ccccc
Q 019931 321 SKAAG 325 (334)
Q Consensus 321 sKa~G 325 (334)
+|++|
T Consensus 292 gK~lg 296 (442)
T TIGR03372 292 AKALG 296 (442)
T ss_pred hhhhc
Confidence 99997
No 51
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=193.74 Aligned_cols=214 Identities=20% Similarity=0.270 Sum_probs=157.2
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.++ ..||. +||+|.+|+.+. ......++.. .++...+|.++|+++.. .+.+++++||++
T Consensus 76 l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~l~~~~~~~--~~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 152 (459)
T PRK11522 76 LVDTQGQEFIDCLGGFGIFNVGH-RNPVVVSAVQNQLAKQPLHSQEL--LDPLRAMLAKTLAALTPGKLKYSFFCNSGTE 152 (459)
T ss_pred EEECCCCEEEECCcCHHhhhcCC-CCHHHHHHHHHHHhhCccccccc--CCHHHHHHHHHHHHhCCCCCCEEEEeCCchH
Confidence 467889999999886 45776 589999987553 3333333322 36777899999999875 356888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHHHhc
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~l~~ 248 (334)
||.++++..... ++ .+++..+|.....+|+.....+.++.... ...+..++.+|.+++++++++
T Consensus 153 Ave~AlklAr~~----t~----~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 224 (459)
T PRK11522 153 SVEAALKLAKAY----QS----PRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSE 224 (459)
T ss_pred HHHHHHHHHHHH----hc----cCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHH
Confidence 999999964331 11 01234677788889998765555442100 012345667899999998864
Q ss_pred C---CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecC
Q 019931 249 C---TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTL 320 (334)
Q Consensus 249 ~---~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~Sl 320 (334)
. ..+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ ++++++.| ||+ ||
T Consensus 225 ~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~gv~P--Div--t~ 298 (459)
T PRK11522 225 CKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-G-MGRTGKMFACEHENVQP--DIL--CL 298 (459)
T ss_pred hhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-c-CCccchhhhhhccCCCC--CEE--Ee
Confidence 2 235689999999999999888 9999999999999999999996 6 79999875 57889887 555 89
Q ss_pred cccccC----CccEEee
Q 019931 321 SKAAGC----QGGFIAC 333 (334)
Q Consensus 321 sKa~G~----~GG~i~~ 333 (334)
+|++|. .|+++++
T Consensus 299 gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 299 AKALGGGVMPIGATIAT 315 (459)
T ss_pred chhhhCCCccceeEEEc
Confidence 999973 5666653
No 52
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.87 E-value=3.9e-21 Score=188.44 Aligned_cols=160 Identities=18% Similarity=0.188 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+++||+++++++|.+.+++++||++|+..++.+++++ ||.|++....|.+....+.......|
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~--------------Gd~Vi~~~~~y~~t~~~~~~~~~~~G 125 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQA--------------GDHVVSSRSLFGSTVSLFEKIFARFG 125 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEccCcchhHHHHHHHHHHHcC
Confidence 4778999999999999999999999999999999888764 78888888888775544321112238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+++.. +
T Consensus 126 ~~v~~vd~~d~~~l~~~i~~---~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---------p 193 (390)
T PRK08133 126 IETTFVDLTDLDAWRAAVRP---NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---------P 193 (390)
T ss_pred cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---------c
Confidence 89999999999999998864 78999999999999999999999999999999999999998764421 1
Q ss_pred CCCCccEEEecCcccccC----CccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+..++||++.|+||.+++ .||+|+++
T Consensus 194 l~~g~Divv~S~sK~~~g~g~~~GG~vv~~ 223 (390)
T PRK08133 194 LKLGADVVIHSATKYLDGQGRVLGGAVVGS 223 (390)
T ss_pred hhhCCcEEEeecceeecCCcceEeEEEEcC
Confidence 233568999999999976 46888763
No 53
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.87 E-value=6.3e-21 Score=185.04 Aligned_cols=213 Identities=22% Similarity=0.268 Sum_probs=147.7
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||++ ++|||+ +||.|.+++.+. ......++.+ ..+.+.+||++|++++|.+++++++||++|+.
T Consensus 22 ~~~~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 22 YDVNGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHVSNLY--YTEPQEELAEKLVEHSGADRVFFCNSGAEANE 98 (379)
T ss_pred EeCCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHH
Confidence 3467799999999 689998 689999866542 2221222322 35788999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++.... .+. ...++.+|+.+..+|............. ....+..++++|+++|++.+.+
T Consensus 99 ~a~~~~~~~~----~~~--~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 169 (379)
T TIGR00707 99 AALKLARKYT----GDK--GKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--- 169 (379)
T ss_pred HHHHHHHHHh----hcc--CCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh---
Confidence 9998653210 000 0002455666777887765554332100 0122345667899999998864
Q ss_pred CcEEEEEcCCCCCCCCcc-C---HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFA-P---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~-p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|+++++++++|... + +++|.++|+++|+++|+||+|+ + +|++|.+.. ...++.+ |++ ||||+++.
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~-~~~~g~~~~~~~~~~~~--d~~--t~sK~~~~ 243 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-G-IGRTGKFFAYEHYGIEP--DII--TLAKGLGG 243 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCccchhhhHHhcCCCC--CEE--EEcccccC
Confidence 678999999998888643 2 8999999999999999999997 4 566565432 3345444 444 89999983
Q ss_pred --CccEEeeC
Q 019931 327 --QGGFIACR 334 (334)
Q Consensus 327 --~GG~i~~~ 334 (334)
..|+++++
T Consensus 244 G~riG~~~~~ 253 (379)
T TIGR00707 244 GVPIGATLAK 253 (379)
T ss_pred CcccEEEEEc
Confidence 23777653
No 54
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.87 E-value=8.6e-21 Score=183.54 Aligned_cols=185 Identities=17% Similarity=0.136 Sum_probs=148.4
Q ss_pred CCHHHHHHHHHhcCCCCccccccCc-----hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGY-----TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~-----~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
-.|.+++++++|+.|.++++...+. .+.+.++++++++++|.+++++++++++++..++.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~---------- 82 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEK---------- 82 (361)
T ss_pred CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCC----------
Confidence 4788999999999888777653332 3678999999999999988999999999999999887654
Q ss_pred CCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC----CCcEEEEEcCCCCCCCC
Q 019931 199 FKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT----MRKKVVVTDSLFSMDGD 267 (334)
Q Consensus 199 ~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~----~~~~lVv~e~v~n~~G~ 267 (334)
||.|+++...|.+....++.. |++++.++. .|+++|++++++.. +++++|++++++|++|.
T Consensus 83 ----gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~ 154 (361)
T cd06452 83 ----GDWVVVDGLAHYTSYVAAERA----GLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGN 154 (361)
T ss_pred ----CCEEEEcCCcchHHHHHHHhc----CCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCee
Confidence 788999888898887666555 788877753 37889998886421 26789999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC--ccEEeeC
Q 019931 268 FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ--GGFIACR 334 (334)
Q Consensus 268 ~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~--GG~i~~~ 334 (334)
+.|+++|.++|+++|+++++|+||+.|.+...+ ...++|++++|++|++++. +||++++
T Consensus 155 ~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~--------~~~~~d~~~~s~~K~l~~~~~~G~l~~~ 215 (361)
T cd06452 155 LHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSG--------KELGADFIVGSGHKSMAASAPIGVLATT 215 (361)
T ss_pred eccHHHHHHHHHHcCCeEEEECCcccCCcCCCH--------HHcCCCEEEecCCccccCCCCeEEEEEC
Confidence 999999999999999999999999976432111 1234689999999999753 4888764
No 55
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.4e-20 Score=183.77 Aligned_cols=212 Identities=21% Similarity=0.257 Sum_probs=151.9
Q ss_pred hcccceeEEEeec---CccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSG---NDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||++ +++||. +||.+.+++.+. ......+. .+..+...+|+++|+++.+.+++++++||++|+.
T Consensus 34 ~d~dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 34 WDDDGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKLIHTSN--LYYIEPQEELAEKLVELSGMDKVFFCNSGAEANE 110 (396)
T ss_pred EeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHH
Confidence 4567899999988 578888 589999977653 22222222 1236888999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++...+. +...++..+|..+..+|+....++...... ....+..++++|+++|++++.+
T Consensus 111 ~al~~a~~~~~------~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~--- 181 (396)
T PRK02627 111 AAIKLARKYGH------KKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITD--- 181 (396)
T ss_pred HHHHHHHHHhc------ccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCC---
Confidence 99997765421 001112456778888998776665543100 0112356778899999999853
Q ss_pred CcEEEEEcCCCCCCCC-ccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGD-FAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~-~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++++++|++|. +.| +++|+++|++||++||+||+|+ | +|++|.+. .+.+++.+ |+ .||||++|+
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g-~g~~g~~~~~~~~~~~p--di--~t~sK~~~~ 255 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT-G-MGRTGKLFAYQHYGIEP--DI--MTLAKGLGG 255 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-C-CCccCceeeehhcCCCC--CE--EEEcchhhC
Confidence 7899999999999884 333 8999999999999999999998 4 57766543 23556555 44 489999983
Q ss_pred --CccEEee
Q 019931 327 --QGGFIAC 333 (334)
Q Consensus 327 --~GG~i~~ 333 (334)
.-|++++
T Consensus 256 G~rig~~~~ 264 (396)
T PRK02627 256 GVPIGAVLA 264 (396)
T ss_pred CcccEEEEE
Confidence 1255554
No 56
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=7.2e-21 Score=185.17 Aligned_cols=204 Identities=21% Similarity=0.249 Sum_probs=145.8
Q ss_pred hcccceeEEEeecC-ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh-CC-C-cEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN-DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK-KK-E-DCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn-~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~-g~-e-~alv~~sG~~An 178 (334)
++.+|++||||.|+ .|+++.+||+|++++.+.- .... ++ ...+.++++++++.+ +. + .+++++||++||
T Consensus 24 ~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~-~~-----~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~ 97 (375)
T PRK04260 24 IDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWH-SP-----NLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEAN 97 (375)
T ss_pred EeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCc-cc-----CccCCHHHHHHHHHHhcCcCCEEEEcCccHHHH
Confidence 45677999999987 6899999999999775432 2111 11 123355666666644 32 2 357789999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC-----C--c-EEEEeeCCCHHHHHHHHhcCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK-----M--V-EVFVYKHCDMSHLKTLLSCCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~-----g--~-~v~~~~~~D~~~Le~~l~~~~ 250 (334)
..+++.+... +++..+|..+..+|+++..++.++.... + . .+...+++|++++++++.+
T Consensus 98 ~~Al~~ar~~-----------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~-- 164 (375)
T PRK04260 98 EAAIKIARKA-----------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNK-- 164 (375)
T ss_pred HHHHHHHHHh-----------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCC--
Confidence 9999876431 2346778889999999888776542110 0 0 1222347899999998853
Q ss_pred CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
++++|++|++++++|.+.| |++|.++|+++|+++|+||+|. | +|++|.++. +.+++.|+ | .||||++|
T Consensus 165 -~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~~pd--i--~t~sK~l~ 237 (375)
T PRK04260 165 -NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGIEPD--I--FTLAKGLA 237 (375)
T ss_pred -CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCCCCC--E--EEeccccc
Confidence 6789999999999998766 8999999999999999999997 6 788886643 45677664 4 49999997
Q ss_pred C--CccEEee
Q 019931 326 C--QGGFIAC 333 (334)
Q Consensus 326 ~--~GG~i~~ 333 (334)
+ ..|++++
T Consensus 238 ~G~~ig~~~~ 247 (375)
T PRK04260 238 NGVPVGAMLA 247 (375)
T ss_pred CCcceEEEEE
Confidence 3 3355554
No 57
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.86 E-value=8.5e-21 Score=188.25 Aligned_cols=207 Identities=18% Similarity=0.213 Sum_probs=149.0
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
+|.+|++||||.++ ..||. +||+|.+|+++.- .+.. ..-.++...+|.++|.+..+. +++.+++||++|
T Consensus 48 ~D~dG~~yiD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~----~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA 122 (433)
T PRK00615 48 IDSLGKTFIDFCGSWGSLIHGH-SHPKICDAIQQGAERGTS----YGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEA 122 (433)
T ss_pred EECCCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHH
Confidence 56788999999775 34676 4999999876542 2221 112356778899999998764 478888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhh---HHHHHHhhhc------------CCcEEEEeeCCCHHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASI---IDGIRIAERT------------KMVEVFVYKHCDMSHL 242 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~---~~g~~ls~~~------------~g~~v~~~~~~D~~~L 242 (334)
+..+++.... .+++..+|.....+|+.. ..++.+.... .......++|+|+++|
T Consensus 123 ~e~AiklAr~-----------~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 191 (433)
T PRK00615 123 TMTAVRLARG-----------ITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIF 191 (433)
T ss_pred HHHHHHHHHH-----------hhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHH
Confidence 9999996433 234566777788889854 3332222100 0112345678999999
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCc-ccccccCCCCCccEEE
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG-GVAEQFNCERDVDICV 317 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~-g~~~~~~~~~~~Div~ 317 (334)
++++++...+..+|++|+++++.|++.| +++|+++|++||++||+||+|. |+ ++|. |..+++++.| ||+
T Consensus 192 ~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~--R~G~~ga~~~~gv~P--Di~- 265 (433)
T PRK00615 192 QTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GF--RVAQGGAAAIYHVKP--DIT- 265 (433)
T ss_pred HHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc--cccHhHHHHhcCCCC--CeE-
Confidence 9999765456789999999999999888 5699999999999999999995 64 4454 3457888877 454
Q ss_pred ecCcccccC--CccEEee
Q 019931 318 GTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 318 ~SlsKa~G~--~GG~i~~ 333 (334)
+|+|++|. .+|+|++
T Consensus 266 -~~gK~lggG~p~~av~~ 282 (433)
T PRK00615 266 -VYGKILGGGLPAAAVVA 282 (433)
T ss_pred -EEcccccCCcceeeeee
Confidence 69999973 3666665
No 58
>PRK06062 hypothetical protein; Provisional
Probab=99.86 E-value=1.3e-20 Score=187.98 Aligned_cols=210 Identities=16% Similarity=0.210 Sum_probs=152.1
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.++ ..||. +||+|.+|+.+. ..+...+... .++...+|.++|+++.+ .+++++++||++
T Consensus 47 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 123 (451)
T PRK06062 47 VWDYEGRRYLDFSSQLVNTNIGH-QHPKVVAAIQEQAARLCTVAPAH--ANDARSEAARLIAERAPGDLSKVFFTNGGAD 123 (451)
T ss_pred EEECCCCEEEEcccCHHhhcCCC-CCHHHHHHHHHHHHhcCCcCCcc--CCHHHHHHHHHHHHhCCCCCCEEEEcCChHH
Confidence 356888999999875 45777 589999977543 3332222222 25777899999999875 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---------CcEEEEee------C---CC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---------MVEVFVYK------H---CD 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---------g~~v~~~~------~---~D 238 (334)
|+.++++.... .+++..+|.....+|+.....+.++.... +.....++ . +|
T Consensus 124 Ave~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 192 (451)
T PRK06062 124 ANEHAVRMARL-----------HTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTE 192 (451)
T ss_pred HHHHHHHHHHH-----------hhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCCh
Confidence 99999996433 23456777788889998776665542100 11111111 1 23
Q ss_pred -------HHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 239 -------MSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 239 -------~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
+++|+++++.. +.+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ .+
T Consensus 193 ~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-G-fGRtG~~~a~~ 270 (451)
T PRK06062 193 EEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-G-FGRTGKWFAIE 270 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-C-CCcCcHHHHHH
Confidence 67888888643 235789999999999999988 9999999999999999999998 4 89999886 47
Q ss_pred ccCCCCCccEEEecCcccccC----CccEEe
Q 019931 306 QFNCERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
++++.| ||+ ||+|++|. .|+++.
T Consensus 271 ~~gv~P--Di~--t~gK~lggG~~Pigav~~ 297 (451)
T PRK06062 271 HFGVVP--DLI--TFAKGVNSGYVPLGGVAI 297 (451)
T ss_pred hcCCCC--Cee--eechhhhcCCcCcEEEEE
Confidence 899987 444 89999974 556554
No 59
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-20 Score=187.77 Aligned_cols=203 Identities=16% Similarity=0.183 Sum_probs=145.8
Q ss_pred hhcccceeEEEeecCccCCCC-CCHHHHHHHHHh-cCCCC-ccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLS-SHPTIAKAAARH-GMGPR-GSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~-~~p~v~~a~~~~-g~g~~-~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
.++.+|++||||+++.++.|. +||+|++|+.+. ..... .+++ .++...+|+++|+++.+. +.+++++||++|
T Consensus 66 l~D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~---~~~~~~~lae~L~~~~p~~~~~v~f~~sGseA 142 (459)
T PRK06082 66 IEDVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRF---TNETAIECAEKLTEIAGGELNRVLFAPGGTSA 142 (459)
T ss_pred EEECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCcc---CCHHHHHHHHHHHHhCCCCCCEEEECCCcHHH
Confidence 357889999999987774444 799999977543 22211 1222 257789999999999863 567788999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEE--------eeCCC-
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFV--------YKHCD- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~--------~~~~D- 238 (334)
+.++++.... .+++..+|.....+|+....++.++... .+...+. +.++|
T Consensus 143 ve~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06082 143 IGMALKLARH-----------ITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADG 211 (459)
T ss_pred HHHHHHHHHH-----------hcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhH
Confidence 9999986443 1334667777888899887777655210 0011111 11112
Q ss_pred -----HHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCC
Q 019931 239 -----MSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNC 309 (334)
Q Consensus 239 -----~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~ 309 (334)
+++|++++++. .+..+|++|+++++++.++| |++|+++|++||++||+||+|+ | +|++|.+++ +++++
T Consensus 212 ~~~~~~~~l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G-~GRtG~~fa~e~~gv 288 (459)
T PRK06082 212 SDVHYADYLEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-G-MGRTGEWFTHQAYGI 288 (459)
T ss_pred HHHHHHHHHHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHhHhhCC
Confidence 35578888643 36789999999998666666 9999999999999999999998 5 799998865 78898
Q ss_pred CCCccEEEecCcccccC
Q 019931 310 ERDVDICVGTLSKAAGC 326 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~ 326 (334)
.| ||+ +|+|++|.
T Consensus 289 ~P--Div--~~gKgl~g 301 (459)
T PRK06082 289 EP--DIL--CIGKGLGG 301 (459)
T ss_pred CC--CEE--EecccccC
Confidence 87 566 69999973
No 60
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.86 E-value=1e-20 Score=184.69 Aligned_cols=159 Identities=20% Similarity=0.216 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEE-cCCCchhhHHHHHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFS-DALNHASIIDGIRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~-d~~~H~s~~~g~~ls~~~~ 227 (334)
+|.+..||++||++.|.+++++++||++|+..++.+++++ ||.|++ +..++++. .-+.......
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~--------------GD~Vl~~~~~y~~t~-~~~~~~~~~~ 113 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKA--------------GDHVLMVDSAYEPTR-YFCDIVLKRM 113 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCC--------------CCEEEEcCCCcHHHH-HHHHHHHHhc
Confidence 3778999999999999999999999999999999988765 666765 44444432 2211111122
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+.++..++..+.+++++++++ ++++|++++++|++|.+.|+++|+++|+++|+++|+|++|+.|++.+
T Consensus 114 gi~v~~~d~~~~e~l~~~i~~---~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~--------- 181 (377)
T TIGR01324 114 GVDITYYDPLIGEDIATLIQP---NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK--------- 181 (377)
T ss_pred CcEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------
Confidence 677777776666788888764 79999999999999999999999999999999999999999886532
Q ss_pred CCCCCccEEEecCcccccC----CccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
++..++||+++|++|.+|+ .||+|+++
T Consensus 182 pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~ 212 (377)
T TIGR01324 182 PLEHGVDISIQAGTKYLVGHSDIMIGTVVAN 212 (377)
T ss_pred ccccCceEEEecCceeccCCCCceEEEEEeC
Confidence 2345689999999999975 46777653
No 61
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=1.9e-20 Score=185.76 Aligned_cols=158 Identities=18% Similarity=0.158 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+++||++|+++.|.+.+++|+||++|+.+++.+++++ ||.|++....|..+...+.......+
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~--------------Gd~Vv~~~~~y~~t~~~~~~~l~~~G 133 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGA--------------GDHIVSSPRLYGGTYNLFHYTLPKLG 133 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCC--------------CCEEEEeCCcchHHHHHHHHHhhcCe
Confidence 4778899999999999999999999999999999888765 77777766666665443332112236
Q ss_pred cEEEEee-CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYK-HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~-~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
++++.++ ..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+++. .
T Consensus 134 i~v~~vdd~~d~e~l~~ai~~---~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~---------~ 201 (436)
T PRK07812 134 IEVSFVEDPDDLDAWRAAVRP---NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI---------R 201 (436)
T ss_pred EEEEEECCCCCHHHHHHhCCC---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC---------C
Confidence 7777774 4577888877753 7899999999999999999999999999999999999999876442 1
Q ss_pred CCCCCccEEEecCcccccCCccEEe
Q 019931 308 NCERDVDICVGTLSKAAGCQGGFIA 332 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~GG~i~ 332 (334)
.+..++|+++.|++|.+|+.|++++
T Consensus 202 pl~~GaDivv~S~tK~lgg~G~~i~ 226 (436)
T PRK07812 202 PLEHGADIVVHSATKYLGGHGTAIA 226 (436)
T ss_pred chhcCCCEEEEecccccCCCCCeEE
Confidence 2345689999999999998775444
No 62
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=2.3e-20 Score=183.74 Aligned_cols=160 Identities=18% Similarity=0.133 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++||++.|.+++++++||+.|+..++.+++.+ ||.|++....|..............|
T Consensus 69 ~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~--------------Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGA--------------GDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCC--------------CCEEEEccCCcchHHHHHHHHHHHcC
Confidence 3667999999999999999999999999999999888764 77888777666554433322112238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.+++.. +
T Consensus 135 ~~v~~vd~~d~~~l~~ai~~---~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---------~ 202 (403)
T PRK07810 135 VETVFVDGEDLSQWEEALSV---PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQR---------G 202 (403)
T ss_pred cEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCC---------h
Confidence 89999999999999999875 78999999999999999999999999999999999999999875421 1
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++||++.|++|.+++. ||+|+++
T Consensus 203 ~~~gaDivv~S~tK~l~g~g~~~gG~v~~~ 232 (403)
T PRK07810 203 LPLGADVVVYSGTKHIDGQGRVLGGAILGD 232 (403)
T ss_pred hhcCCcEEEccCCceecCCcCceeEEEEeC
Confidence 2335799999999999753 6888764
No 63
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.86 E-value=2.6e-20 Score=186.48 Aligned_cols=205 Identities=17% Similarity=0.201 Sum_probs=148.7
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~A 177 (334)
.+|.+|++||||.++ ..||. +||+|.+++++. ..+.. ....++...+|.++|++... .+.+.+++||++|
T Consensus 93 l~D~dG~~yiD~~~g~g~~~lGh-~~p~v~~av~~ql~~~~~----~~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA 167 (474)
T PLN02482 93 AWDVDGNEYIDYVGSWGPAIIGH-ADDEVLAALAETMKKGTS----FGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEA 167 (474)
T ss_pred EEECCCCEEEEecccccccccCC-CCHHHHHHHHHHHhhCCC----CCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHH
Confidence 468899999999775 34777 489999987553 33321 12235666788999998875 5788889999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH--h-------hhcCC------cEEEEeeCCCHHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI--A-------ERTKM------VEVFVYKHCDMSHL 242 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l--s-------~~~~g------~~v~~~~~~D~~~L 242 (334)
++.+++.... .+++..+|.....+|+..-..... . ....+ ..++.+++||+++|
T Consensus 168 ~e~AlklAR~-----------~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l 236 (474)
T PLN02482 168 CMGVLRLARA-----------YTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAV 236 (474)
T ss_pred HHHHHHHHHH-----------hcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHH
Confidence 9999986433 234566777788888853110000 0 00001 24567889999999
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEE
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICV 317 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~ 317 (334)
++++++...+..+|++|+++++.|.+.| |++|+++|++||++||+||+|. |+ +.|.+. .+++++.|+ |
T Consensus 237 ~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-Gf--R~g~~ga~~~~gv~PD--i-- 309 (474)
T PLN02482 237 KKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GF--RIAYGGAQEYFGITPD--L-- 309 (474)
T ss_pred HHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Ce--ecCcchHhHHhCCCCC--E--
Confidence 9999765456789999999999998887 6789999999999999999995 64 445444 467898774 5
Q ss_pred ecCcccccC---CccE
Q 019931 318 GTLSKAAGC---QGGF 330 (334)
Q Consensus 318 ~SlsKa~G~---~GG~ 330 (334)
.||+|++|. .|++
T Consensus 310 ~t~gK~lggG~Pigav 325 (474)
T PLN02482 310 TTLGKVIGGGLPVGAY 325 (474)
T ss_pred EEecchhhCCCceEEE
Confidence 489999974 4555
No 64
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.86 E-value=3.4e-20 Score=183.88 Aligned_cols=206 Identities=18% Similarity=0.155 Sum_probs=151.9
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~A 177 (334)
.+|.+|++||||.+. ..+|. +||+|.+|+.+. ..+.. ..-.++...+|.++|++..+ .+++++++||++|
T Consensus 47 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~----~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA 121 (428)
T PRK12389 47 FYDVDGNKYIDYLAAYGPIITGH-AHPHITKAITEAAENGVL----YGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEA 121 (428)
T ss_pred EEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCc----cCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHH
Confidence 356888999999764 34666 589999977543 33321 11235777889999988774 5678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------------CCcEEEEeeCCCHHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------------KMVEVFVYKHCDMSHL 242 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------------~g~~v~~~~~~D~~~L 242 (334)
+..+++.... .+++..+|.....+|+.....+.++... ....+..++++|++.|
T Consensus 122 ~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 190 (428)
T PRK12389 122 VMTTIRVARA-----------YTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEAL 190 (428)
T ss_pred HHHHHHHHHH-----------hhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHH
Confidence 9999996443 2345667778888998765554443100 0124567788999999
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEE
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICV 317 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~ 317 (334)
++++++...+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+. + +++.+. .+++++.|| |+
T Consensus 191 ~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG--~-Rt~~~~a~~~~gv~PD--iv- 264 (428)
T PRK12389 191 KEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITA--F-RFMYGGAQDLLGVEPD--LT- 264 (428)
T ss_pred HHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccc--c-ccCcchhhHHhCCCCC--ee-
Confidence 9999765456789999999999999888 99999999999999999999984 3 555543 467898774 54
Q ss_pred ecCcccccC---CccEE
Q 019931 318 GTLSKAAGC---QGGFI 331 (334)
Q Consensus 318 ~SlsKa~G~---~GG~i 331 (334)
||+|++|. .|+++
T Consensus 265 -t~gK~lggG~Pi~av~ 280 (428)
T PRK12389 265 -ALGKIIGGGLPIGAYG 280 (428)
T ss_pred -eechhhcCCCceeEEe
Confidence 89999975 45553
No 65
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.86 E-value=3e-20 Score=184.12 Aligned_cols=210 Identities=19% Similarity=0.188 Sum_probs=147.2
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhC----CC-cEEEe-c
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKK----KE-DCLLC-P 172 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g----~e-~alv~-~ 172 (334)
+|.+|++||||.+. ..||. +||+|.+|+++.-. +.... ..-.++...+|.++|++... .+ .++++ +
T Consensus 34 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 110 (425)
T PRK09264 34 YDEDGKEYIDFFAGAGALNYGH-NNPVLKQALIDYLQRDGITHG--LDMHTTAKREFLETFEETILKPRGLDYKVQFTGP 110 (425)
T ss_pred EeCCCCEeeecccchhhccCCC-CCHHHHHHHHHHHHhcccccc--cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCC
Confidence 46778999999875 45777 59999998865322 21111 11135667889999988642 33 45565 7
Q ss_pred cHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC---cEEEEeeC--------
Q 019931 173 TGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM---VEVFVYKH-------- 236 (334)
Q Consensus 173 sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g---~~v~~~~~-------- 236 (334)
||++||.++++.... .+++..+|.....+|+.....+.++... .+ ..+..++.
T Consensus 111 sGseA~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 179 (425)
T PRK09264 111 TGTNAVEAALKLARK-----------VTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDV 179 (425)
T ss_pred CHHHHHHHHHHHHHH-----------hcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccch
Confidence 999999999996443 2345667778888999876665553210 01 12333333
Q ss_pred CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccC
Q 019931 237 CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFN 308 (334)
Q Consensus 237 ~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~ 308 (334)
+|+++|++++++.. ++..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ .++++
T Consensus 180 ~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GrtG~~~~~~~~~ 257 (425)
T PRK09264 180 DTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-G-CGRTGTFFSFERAG 257 (425)
T ss_pred hHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-C-CccccHHHHHhhcC
Confidence 47888999987532 25689999999999887543 9999999999999999999998 5 89999875 46778
Q ss_pred CCCCccEEEecCcccccCCc---cEEee
Q 019931 309 CERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+.| ||+ ||+|++|..| |++++
T Consensus 258 v~P--Di~--t~~K~l~~~G~pigav~~ 281 (425)
T PRK09264 258 ITP--DIV--TLSKSISGYGLPMALVLI 281 (425)
T ss_pred CCC--CEE--EeccccCCCccceEEEEE
Confidence 777 454 8899998645 55554
No 66
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.86 E-value=7.5e-21 Score=183.17 Aligned_cols=208 Identities=24% Similarity=0.266 Sum_probs=151.2
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGFAANM 179 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~~An~ 179 (334)
++|||++|+|+...++|.+.+++++.-. ........++....+.+|+++++++++ .+..+++++|+.++.
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5789999999999888777775443321 122233344444556889999999988 343577777877766
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEee-------CCCHHHHHHHHhcCC-C
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYK-------HCDMSHLKTLLSCCT-M 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~-------~~D~~~Le~~l~~~~-~ 251 (334)
.++..+... ++++.|+++.+.|..+...++.. +.+++.++ +.|+++|++.+++.+ .
T Consensus 82 ~~~~~~~~~------------~~~~~vlv~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 82 FLLLRLLKI------------NPGDTVLVPDPCYPSYIEAARLL----GAEVIPVPLDSENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHS------------STTSEEEEEESSSTHHHHHHHHT----TSEEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred hhhhhcccc------------cccccceecCCcccccccccccc----Cceeeecccccccccccccccccccccccccc
Confidence 666555521 13788999999999999888877 88888888 679999999998742 1
Q ss_pred --CcEEEEEcCCCCCCCCccCHHHH---HHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCc-cEEEecCccccc
Q 019931 252 --RKKVVVTDSLFSMDGDFAPMVEL---VKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDV-DICVGTLSKAAG 325 (334)
Q Consensus 252 --~~~lVv~e~v~n~~G~~~pL~~L---~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~-Div~~SlsKa~G 325 (334)
++++|++++++||+|...+.+++ +++|++||+++|+||+|....++..+.... ...+..+. .|++.||||+||
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFG 224 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTT
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccc
Confidence 36799999999999999886555 455999999999999999887764422210 12222222 489999999999
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 225 ~~GlRvG~i~~~ 236 (363)
T PF00155_consen 225 LPGLRVGYIVAP 236 (363)
T ss_dssp SGGGTEEEEEEE
T ss_pred ccccccccccch
Confidence 999 999863
No 67
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.85 E-value=2.5e-20 Score=182.81 Aligned_cols=160 Identities=16% Similarity=0.140 Sum_probs=131.7
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++||+++|.+.+++++||++|+..++.+++++ ||.|+++...|.+....+.......|
T Consensus 58 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~--------------Gd~Vi~~~~~y~~t~~~~~~~~~~~G 123 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKA--------------GDHLISDECLYGCTFALLEHALTKFG 123 (391)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEecCcchHHHHHHHHHHhcCC
Confidence 3667999999999999999999999999999999888764 78888888777665544433222337
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
+++..++.+|++++++++++ ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.++++. .
T Consensus 124 ~~~~~vd~~d~e~l~~~i~~---~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---------~ 191 (391)
T TIGR01328 124 IQVDFINMAIPEEVKAHIKD---NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---------P 191 (391)
T ss_pred eEEEEECCCCHHHHHHhhcc---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---------c
Confidence 88888888899999988864 78999999999999999999999999999999999999999775532 1
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++||++.|++|.+|+. ||+++++
T Consensus 192 ~~~g~Divv~S~sK~lgg~g~~~gG~v~~~ 221 (391)
T TIGR01328 192 VALGVDVVVHSATKYIGGHGDVVAGLICGK 221 (391)
T ss_pred hhcCCCEEEccccccccCCCCceEEEEEcC
Confidence 2345789999999999863 5888763
No 68
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.85 E-value=2.1e-20 Score=185.20 Aligned_cols=212 Identities=17% Similarity=0.123 Sum_probs=146.0
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~ 176 (334)
.+|.+||+||||.++ ..||.+ ||+|.+|+++. ........ ..-.++...+|.++|+++.+. +.+++++||++
T Consensus 37 l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsE 114 (428)
T PRK07986 37 LILADGRRLVDGMSSWWAAIHGYN-HPQLNAAMKSQIDAMSHVMF-GGITHPPAIELCRKLVAMTPQPLECVFLADSGSV 114 (428)
T ss_pred EEeCCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHhhcCCccc-cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHH
Confidence 356888999999875 467885 79999988654 22221111 111356778899999998753 57788899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----------CCcEEEE---------eeC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----------KMVEVFV---------YKH 236 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----------~g~~v~~---------~~~ 236 (334)
|++.+++....-.. .. .+++..+|.....+|+.....+.++... .+..... +++
T Consensus 115 Ave~AlklAr~~~~--~~----g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 188 (428)
T PRK07986 115 AVEVAMKMALQYWQ--AK----GEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188 (428)
T ss_pred HHHHHHHHHHHHHH--hc----CCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHH
Confidence 99999996443100 00 0234567778888998765554442100 0111111 125
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCc-c-C---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCC
Q 019931 237 CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDF-A-P---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCE 310 (334)
Q Consensus 237 ~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~-~-p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~ 310 (334)
+|+++++++++....+..+|++|+++++.|.+ . | |++|+++|++||++||+||+| +| +|++|.++ .+++++.
T Consensus 189 ~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG-~GrtG~~fa~~~~gv~ 266 (428)
T PRK07986 189 RDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TG-FGRTGKLFACEHAGIA 266 (428)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CccCCCeeeecccCCC
Confidence 67889999997544467899999985554433 2 2 899999999999999999999 57 69999986 4788887
Q ss_pred CCccEEEecCcccccCCccE
Q 019931 311 RDVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 311 ~~~Div~~SlsKa~G~~GG~ 330 (334)
| ||+ +|+|++| |||
T Consensus 267 P--Di~--t~gK~l~--gG~ 280 (428)
T PRK07986 267 P--DIL--CLGKALT--GGT 280 (428)
T ss_pred C--CEE--Eechhhh--CCc
Confidence 7 566 7999996 554
No 69
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=4.9e-20 Score=183.60 Aligned_cols=211 Identities=17% Similarity=0.164 Sum_probs=147.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~ 176 (334)
++.+|++||||.++ ..||. +||+|.+|+++. ..+...+.. ...++...+|.++|+++.+. +++++++||++
T Consensus 37 ~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGse 114 (445)
T PRK08593 37 TDVDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSD 114 (445)
T ss_pred EeCCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHH
Confidence 45778999999774 34788 599999987643 333222111 12357778999999998853 46777799999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---------CcEEEEeeCC----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---------MVEVFVYKHC---------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---------g~~v~~~~~~---------- 237 (334)
||+++++.... .+++..+|..+..+|+.....+.++.... ...+..++..
T Consensus 115 A~e~AiklAr~-----------~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 115 ANDGIIKFARA-----------YTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred HHHHHHHHHHH-----------hhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 99999986432 23456788889999998877765552100 0112222221
Q ss_pred CH-------HHHHHHHhcC--CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-
Q 019931 238 DM-------SHLKTLLSCC--TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV- 303 (334)
Q Consensus 238 D~-------~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~- 303 (334)
+. ++++++++.. ..+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g-~GrtG~~~a 261 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-G-LGRTGKWSS 261 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcCchHHH
Confidence 11 3455555432 246889999999999998876 9999999999999999999997 3 68888865
Q ss_pred ccccCCCCCccEEEecCcccccC--CccEEee
Q 019931 304 AEQFNCERDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
.+++++.| ||+ ||+|++|. .+|++++
T Consensus 262 ~~~~gv~p--Di~--t~gK~l~~G~p~gav~~ 289 (445)
T PRK08593 262 ISHFNITP--DLM--SFGKSLAGGMPMSAIVG 289 (445)
T ss_pred HHhcCCCC--CEe--eecccccCCcccEEEEE
Confidence 46788877 444 89999974 2455654
No 70
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=8.6e-20 Score=179.01 Aligned_cols=203 Identities=15% Similarity=0.179 Sum_probs=159.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC----CCc-EEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK----KED-CLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~-alv~~sG~~An~~ai 182 (334)
++.||++..+ -++..++.+++++.+. ..+...+....|...+.+.+.+.+.+.+| .+. +++++++++|+..++
T Consensus 28 ~~vi~l~iG~-Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 28 EDVIDLSIGE-PDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CCEEEeCCCC-CCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHH
Confidence 4689998887 4888899999977654 33321344677877777777777777766 234 888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----C---CHHHHHHHHhcCCCCcE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----C---DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~---D~~~Le~~l~~~~~~~~ 254 (334)
.+++.+ ||.|++..+.+.++...+.+. |++++.++. + |+++|++++++ +||
T Consensus 107 ~a~~~p--------------GDeVlip~P~Y~~y~~~~~~~----gg~~v~v~l~~~~~~f~~d~~~l~~~i~~---ktk 165 (393)
T COG0436 107 LALLNP--------------GDEVLIPDPGYPSYEAAVKLA----GGKPVPVPLDEEENGFKPDLEDLEAAITP---KTK 165 (393)
T ss_pred HHhcCC--------------CCEEEEeCCCCcCHHHHHHhc----CCEEEEEeCCcCccCCcCCHHHHHhhcCc---cce
Confidence 999876 888888888989998888888 888888773 1 68899998875 799
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc--
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
+|++++|+||+|.+.+ |++|+++|++||++||.||+|...+++.. ....++..+. .+..|++.||||++++.|
T Consensus 166 ~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~-~~~~i~i~s~SK~~~mtGwR 244 (393)
T COG0436 166 AIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA-RDRTITINSFSKTYGMTGWR 244 (393)
T ss_pred EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC-cceEEEEecccccccccccc
Confidence 9999999999999988 78899999999999999999998776531 2222222111 244589999999999988
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 245 vG~~v~~ 251 (393)
T COG0436 245 IGWVVGP 251 (393)
T ss_pred eeEeecC
Confidence 999874
No 71
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.85 E-value=1.2e-20 Score=187.31 Aligned_cols=209 Identities=14% Similarity=0.145 Sum_probs=141.8
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~A 177 (334)
.+|.+|++||||.+. ..||. +||+|.+|+++. ..+.. .+.......+|.++|+++.. .+.+++++||++|
T Consensus 42 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~----~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA 116 (431)
T PRK06209 42 VWDVDGNEYIEYGMGLRAVGLGH-AYPPVVEAVREALQDGCN----FTRPSAIELDAAESFLELIDGADMVKFCKNGSDA 116 (431)
T ss_pred EEeCCCCEEEEccccccchhcCC-CCHHHHHHHHHHHHhCcC----CCCCCHHHHHHHHHHHHhCCccceEEEecCHHHH
Confidence 356888999999774 45777 489999988653 33321 22223444578999999874 4678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEE-cCCCchhh--HHHHH-Hhhhc---CCcEEEEeeCCCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFS-DALNHASI--IDGIR-IAERT---KMVEVFVYKHCDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~-d~~~H~s~--~~g~~-ls~~~---~g~~v~~~~~~D~~~Le~~l~~~~ 250 (334)
++++++.... .+++..+|.+ ...+|+.. ..+.. .+... ....+..++|+|+++|++++++..
T Consensus 117 ~e~AlklAr~-----------~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 185 (431)
T PRK06209 117 TSAAVRLARA-----------YTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYNDIASLEALFEDHP 185 (431)
T ss_pred HHHHHHHHHH-----------HhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCCCHHHHHHHHHhCC
Confidence 9999995433 1233444444 23333210 00000 01000 001245788999999999997544
Q ss_pred CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC--Cc
Q 019931 251 MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC--QG 328 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~--~G 328 (334)
.+..+|++|+++++.+...+|++|+++|++||++||+||+| +|+ +.++.|..+++++.| || .||+|++|. .+
T Consensus 186 ~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~-~~~~~g~~~~~gv~P--Di--~t~gK~lggG~p~ 259 (431)
T PRK06209 186 GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMI-TGF-RWHMRGAQKLYGIVP--DL--SCFGKALGNGFAV 259 (431)
T ss_pred CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccC-CcCcchhhHHhCCCc--ce--eeehhhhcCCccc
Confidence 46789999999998666667999999999999999999999 574 555555555678877 44 589999975 45
Q ss_pred cEEee
Q 019931 329 GFIAC 333 (334)
Q Consensus 329 G~i~~ 333 (334)
|++++
T Consensus 260 ~av~~ 264 (431)
T PRK06209 260 SALAG 264 (431)
T ss_pred EEEEE
Confidence 66654
No 72
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=1.3e-20 Score=188.55 Aligned_cols=178 Identities=18% Similarity=0.120 Sum_probs=130.3
Q ss_pred HHHhcCCCCccccccCchHHHHHHHH----HHHhHhCCCc----EEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCC
Q 019931 132 AARHGMGPRGSALICGYTNYHRLLES----CLADLKKKED----CLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDE 202 (334)
Q Consensus 132 ~~~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e~----alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~ 202 (334)
.++|..|..+.|++.|+.. .+++|. +..++|+.+. +-+. .||+.||++++.+|++|
T Consensus 173 tnkYaEG~pG~Ryy~G~~~-iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~P-------------- 237 (586)
T PLN02271 173 TNKYSEGMPGARYYTGNQY-IDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLP-------------- 237 (586)
T ss_pred cccCCCCCCCCcCCCCChh-HHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCC--------------
Confidence 4679999999999988743 356654 4444778665 5555 59999999999999875
Q ss_pred CeEEEEcCCCchh-hHHHH------HHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc
Q 019931 203 KIAIFSDALNHAS-IIDGI------RIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA 269 (334)
Q Consensus 203 gd~Vl~d~~~H~s-~~~g~------~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~ 269 (334)
||.|+...+.|+. +.++. +.+......++++|+.+ |+++|++++.. .++++|++.+..++ ...
T Consensus 238 GD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Sayp--r~~ 313 (586)
T PLN02271 238 GDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYP--REW 313 (586)
T ss_pred CCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhcc--CcC
Confidence 8889986665554 22221 11211112445566553 89999986654 37888888775444 478
Q ss_pred CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEee
Q 019931 270 PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIAC 333 (334)
Q Consensus 270 pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~ 333 (334)
|+++|+++|+++|++|++|.||..|++.. +. +..+.+++||+++|++|+| |+.||+|++
T Consensus 314 D~~~i~eIAdevGA~LmvD~AH~aGLIa~---g~--~~sP~~~aDvvt~TTHKtLrGPrGG~I~~ 373 (586)
T PLN02271 314 DYARFRQIADKCGAVLMCDMAHISGLVAA---KE--CVNPFDYCDIVTSTTHKSLRGPRGGIIFY 373 (586)
T ss_pred CHHHHHHHHHHcCCEEEEECccccccccc---Cc--CCCCCcCCcEEEeCCcccCCCCCceEEEe
Confidence 89999999999999999999999998742 22 2234457899999999999 889999886
No 73
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.85 E-value=4.4e-20 Score=181.59 Aligned_cols=160 Identities=14% Similarity=0.135 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|++++|.+.+++++||+.|+..++.+++++ ||.|+++...|.+............|
T Consensus 63 ~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~--------------Gd~Vl~~~~~y~~~~~~~~~~~~~~G 128 (400)
T PRK06234 63 NPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKA--------------GDHVVASDTLYGCTFALLNHGLTRYG 128 (400)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCC--------------CCEEEEecCccchHHHHHHHHHhhCC
Confidence 3566899999999999999999999999999999888765 78888887777765544322111238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQ 306 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~ 306 (334)
++++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++ |+++|+|++|+.++++.
T Consensus 129 ~~v~~vd~~d~e~l~~~i~~---~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~-------- 197 (400)
T PRK06234 129 VEVTFVDTSNLEEVRNALKA---NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR-------- 197 (400)
T ss_pred eEEEEECCCCHHHHHHHhcc---CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC--------
Confidence 89999999999999999864 789999999999999999999999999997 99999999999875531
Q ss_pred cCCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 307 FNCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
.+..++||++.|++|.+++. ||+++++
T Consensus 198 -~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~ 228 (400)
T PRK06234 198 -PLQLGADVVVHSATKYLNGHGDVIAGFVVGK 228 (400)
T ss_pred -chhhCCcEEEeeccccccCCCCceeEEEEec
Confidence 12235789999999999764 5888874
No 74
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=7e-20 Score=181.34 Aligned_cols=209 Identities=16% Similarity=0.112 Sum_probs=147.4
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
+|.+|++||||.+. ..||.+ ||+|.+|+++. ..+...+.. .-.++...+|.++|++..+ .+++++++||++|
T Consensus 37 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA 114 (423)
T PRK05964 37 YLADGRELIDAISSWWVATHGHN-HPYIDQAIREQLDRLDHVIFA-GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVA 114 (423)
T ss_pred EeCCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHhhCCCcccc-ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 56788999999875 457774 89999987654 222211110 1124667889999999884 5678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeCCC-----HHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKHCD-----MSHL 242 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~~D-----~~~L 242 (334)
+.++++....-... . + .+++..+|.....+|+.....+.++... .+...+.++++| +++|
T Consensus 115 ~e~A~klar~~~~~-~-~---~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l 189 (423)
T PRK05964 115 VEVALKMALQYWRN-R-G---EPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDAL 189 (423)
T ss_pred HHHHHHHHHHHHHh-c-C---CCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHH
Confidence 99999964321000 0 0 1234667778888998766555443210 123445566677 8889
Q ss_pred HHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEE
Q 019931 243 KTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDIC 316 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div 316 (334)
++++++...+..+|++|+ +.+..|...| |++|+++|++||++||+||+|+ | +|++|.+++ +++++.| ||+
T Consensus 190 ~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g-~gr~G~~~a~~~~~v~p--Di~ 265 (423)
T PRK05964 190 EALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-G-FGRTGTLFACEQAGVSP--DIM 265 (423)
T ss_pred HHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcCcchhHHHhcCCCC--Cee
Confidence 998875444678999999 5776776654 9999999999999999999996 5 688887754 6778776 454
Q ss_pred EecCccccc
Q 019931 317 VGTLSKAAG 325 (334)
Q Consensus 317 ~~SlsKa~G 325 (334)
+++|+++
T Consensus 266 --~~~K~l~ 272 (423)
T PRK05964 266 --CLSKGLT 272 (423)
T ss_pred --eeehhhh
Confidence 8999995
No 75
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=4.4e-20 Score=180.75 Aligned_cols=160 Identities=15% Similarity=0.211 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||+++++++|.+.+++++||++|+..++.+++++ ||.|+++...|......+.......+
T Consensus 60 ~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~--------------Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 60 NPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKA--------------GDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred CcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 3557999999999999999999999999999999888764 78888888888776655543322235
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.++. +
T Consensus 126 i~~~~~~~~d~~~l~~~i~~---~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---------p 193 (386)
T PRK06767 126 ITHSFCDMETEADIENKIRP---NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR---------P 193 (386)
T ss_pred eEEEEeCCCCHHHHHHhhCc---CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC---------c
Confidence 66666666788899888864 78999999999999999999999999999999999999998764431 2
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++|+++.|++|.+++. ||+++++
T Consensus 194 l~~g~Div~~S~sK~l~g~g~~~gG~v~~~ 223 (386)
T PRK06767 194 LELGCDAVVHSATKYIGGHGDVVAGVTICK 223 (386)
T ss_pred hhcCCcEEEecCcceecCCCCceeEEEEeC
Confidence 2345789999999999764 6888864
No 76
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=3.3e-20 Score=183.35 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH-hhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI-AERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l-s~~~~ 227 (334)
.+.+++||+++++++|.+.+++++||++|+..++.+++++ ||.|+++...+......+.. ..+..
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~--------------GD~Vl~~~~~Y~~~~~~~~~~~~~~~ 140 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSS--------------GGHVVASNTLYGGTHALLAHFLPRKC 140 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCC--------------CCEEEEcCCcHHHHHHHHHHhhhhcc
Confidence 5888999999999999999999999999999999998875 78888887766554333211 11112
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+.+++.++..|++++++++++ .++++|++++++||+|.+.|+++|+++|+++|++||+|++|+.+.+.+ .
T Consensus 141 G~~~~~~d~~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~-----~--- 210 (418)
T PLN02242 141 NITTTFVDITDLEAVKKAVVP--GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP-----A--- 210 (418)
T ss_pred CceEEEcCCCCHHHHHHhcCc--CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH-----H---
Confidence 778888888899999998864 148999999999999999999999999999999999999997543321 1
Q ss_pred CCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
..++||++.||||++++. ||+|+++
T Consensus 211 --~~g~divv~S~SK~l~g~g~~~gG~iv~~ 239 (418)
T PLN02242 211 --RLGADVVVHSISKFISGGADIIAGAVCGP 239 (418)
T ss_pred --HcCCcEEEEeCccccCCCCCceEEEEEcC
Confidence 114689999999999764 6888864
No 77
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.84 E-value=2.1e-20 Score=178.12 Aligned_cols=194 Identities=20% Similarity=0.193 Sum_probs=144.6
Q ss_pred EeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhc
Q 019931 113 LFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLL 192 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~ 192 (334)
||+|++++| .+|.+++++.++..+.. .++..+.++++++.+++++|.+.++++++|++|+..++.+++.+
T Consensus 1 ~~~~~~~~~--~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~---- 70 (338)
T cd06502 1 DFRSDTVTG--PTPEMLEAMAAANVGDD----VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQP---- 70 (338)
T ss_pred CcccccCCC--CCHHHHHHHHhcccCCc----ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCC----
Confidence 699999998 47999999887644321 33446778999999999999777888999999999999887754
Q ss_pred cCCCccCCCCCeEEEEcCCCchhhHHH---HHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCC----CCcEEEEEcCC
Q 019931 193 AGDEKSFKDEKIAIFSDALNHASIIDG---IRIAERTKMVEVFVYKH----CDMSHLKTLLSCCT----MRKKVVVTDSL 261 (334)
Q Consensus 193 ~~~~~~~~~~gd~Vl~d~~~H~s~~~g---~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~----~~~~lVv~e~v 261 (334)
||.|+++.+.|.+.... .++. |.+++.+++ .|+++|++++++.. +++++|+++++
T Consensus 71 ----------gd~v~~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 71 ----------GGSVICHETAHIYTDEAGAPEFLS----GVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred ----------CCeEEEecCcceeeecCCcHHHHc----CceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 78899999998775432 2233 788888875 48899999886421 26789999999
Q ss_pred CCCCC--CccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccE-Eee
Q 019931 262 FSMDG--DFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGF-IAC 333 (334)
Q Consensus 262 ~n~~G--~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~-i~~ 333 (334)
+|+.| ...++++|+++|+++|+++|+|+||..+..+..|.... ....++|+++.|+||+||+.||+ +++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~---~~~~~~d~~~~s~sK~~~~~~g~~~~~ 208 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALK---TYKSGVDSVSFCLSKGGGAPVGAVVVG 208 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH---HHHhcCCEEEEeccccCCCccceEEEC
Confidence 99744 23457889999999999999999997554322222111 11235688999999999986665 443
No 78
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.84 E-value=8.8e-20 Score=177.22 Aligned_cols=199 Identities=17% Similarity=0.171 Sum_probs=148.1
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
+|.+|++||||.+. ..+|. +||+|.+|+++. .........+ .++...+|+++|+++.+.+++++++||++|+.
T Consensus 19 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e 95 (364)
T PRK04013 19 WDSQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVAGPMF--EHEEKEEMLEELSKWVNYEYVYMGNSGTEAVE 95 (364)
T ss_pred EECCCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCccCCc--CCHHHHHHHHHHHhhcCCCEEEEeCchHHHHH
Confidence 45778999999875 44777 589999977543 2222111112 24677999999999998888999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---C-----CcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---K-----MVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~-----g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++.+... +++..+|..+..+|+.....+.++... . -..+..++.+|.+.+++.+.+
T Consensus 96 ~Alklar~~-----------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~--- 161 (364)
T PRK04013 96 AALKFARLY-----------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITK--- 161 (364)
T ss_pred HHHHHHHHH-----------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcC---
Confidence 999975542 234567778888998866554432100 0 123455677899999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++|++.+..|...| +++|+++|++||++||+||+++ | + ++|.++ .+++++.|+ |+ +|+|++|.
T Consensus 162 ~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G-~-RtG~~~a~~~~gv~PD--iv--~~gK~lgg 234 (364)
T PRK04013 162 ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS-G-L-RTGKFLAIEHYKVEPD--IV--TMGKGIGN 234 (364)
T ss_pred CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-c-C-CCCchhHHHhcCCCCC--EE--EecccccC
Confidence 7899999999998887554 9999999999999999999998 5 4 888765 467888875 55 89999974
No 79
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=4.2e-20 Score=183.20 Aligned_cols=213 Identities=16% Similarity=0.137 Sum_probs=145.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||.++ ..||.+ ||+|.+|+++. ......... .-.++...+|.++|++..+ .+++++++||++|
T Consensus 39 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseA 116 (429)
T PRK06173 39 TLKDGRRLIDGMSSWWAALHGYN-HPRLNAAATNQLAKMSHIMFG-GFTHEPAVELAQKLLEILPPSLNKIFFADSGSVA 116 (429)
T ss_pred EcCCCCEEEEccchHHhccCCCC-CHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHH
Confidence 46778999999874 467774 79999977543 322211111 1125667889999999874 4678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----c-------CCcEEEEeeC---------C
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----T-------KMVEVFVYKH---------C 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~-------~g~~v~~~~~---------~ 237 (334)
+.++++....... ..+ .+++..+|.....+|+.....+.++.. . .......++. .
T Consensus 117 ve~AlklAr~~~~--~~g---~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 191 (429)
T PRK06173 117 VEVAMKMALQYQQ--AKG---EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDE 191 (429)
T ss_pred HHHHHHHHHHHHH--HhC---CCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHH
Confidence 9999996543100 000 123456777888899976655443210 0 0111112221 1
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCC-CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSL-FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCER 311 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v-~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~ 311 (334)
+++.|++++.+...+...|++|++ .+..|.+.| +++|+++|++||++||+||+| +| +|++|+++ .+++++.|
T Consensus 192 ~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG-~GrtG~~~a~~~~gv~P 269 (429)
T PRK06173 192 AIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG-FGRTGKLFALEHAGVVP 269 (429)
T ss_pred HHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cC-CCcCCcchHHHhcCCCC
Confidence 466678888654457889999997 888787644 899999999999999999999 67 79999987 57889877
Q ss_pred CccEEEecCcccccCCccEE
Q 019931 312 DVDICVGTLSKAAGCQGGFI 331 (334)
Q Consensus 312 ~~Div~~SlsKa~G~~GG~i 331 (334)
||+ +|+|++| |||+
T Consensus 270 --Div--~~gK~l~--gG~~ 283 (429)
T PRK06173 270 --DIM--CIGKALT--GGYL 283 (429)
T ss_pred --CEE--Eeehhhh--CCcc
Confidence 555 6999995 5543
No 80
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=4.7e-20 Score=181.22 Aligned_cols=160 Identities=14% Similarity=0.075 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+++||++|+++.|.+.+++|+||++|+..++.+++.+ ||.|++....|.+....+.......|
T Consensus 63 ~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~--------------GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKP--------------GDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCC--------------CCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 4778999999999999999999999999999999888764 78888888888765433321111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
+++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.++... .
T Consensus 129 i~v~~vd~~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---------~ 196 (398)
T PRK08249 129 VDVTLCETGDHEQIEAEIAK---GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN---------P 196 (398)
T ss_pred eEEEEcCCCCHHHHHHhcCC---CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC---------c
Confidence 88888888899999999864 78999999999999999999999999999999999999998764321 1
Q ss_pred CCCCccEEEecCcccccC----CccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+..++|+++.|++|.+|+ .||+++++
T Consensus 197 l~~~~Divv~S~sK~l~g~~~~~gG~vv~~ 226 (398)
T PRK08249 197 LALGADLVIHSATKFLSGHADALGGVVCGS 226 (398)
T ss_pred hhhCCCEEeccCceecCCCCCceEEEEECC
Confidence 224578999999999985 46887753
No 81
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.84 E-value=6.5e-20 Score=182.53 Aligned_cols=210 Identities=16% Similarity=0.114 Sum_probs=144.3
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.++.+|++||||.+. ..||. +||+|.+|+++.- .....+.. .-.++...+|.++|+++.. .+++++++||++
T Consensus 40 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGse 117 (442)
T PRK13360 40 YTTHDGRRVLDGTAGLWCVNAGH-GRPEIVEAVRAQAGELDYAPAF-QMGHPKAFELANRIAEIAPGGLNHVFFTNSGSE 117 (442)
T ss_pred EEeCCCCEEEECchhHHHhccCC-CCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 356888999999775 44777 5899999776432 21112222 1235667899999999874 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC---cEEEEeeCC-----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM---VEVFVYKHC----------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g---~~v~~~~~~----------- 237 (334)
|+.++++..... +.... ..++..+|.....+|+.....+.++... .+ ..+..++..
T Consensus 118 A~e~AlklAr~~----~~~~g-~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (442)
T PRK13360 118 SVDTALKIALAY----HRARG-EGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192 (442)
T ss_pred HHHHHHHHHHHH----HHhcC-CCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCC
Confidence 999999864431 00000 0123456667888998866555443110 00 111222221
Q ss_pred -------CHHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c
Q 019931 238 -------DMSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A 304 (334)
Q Consensus 238 -------D~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~ 304 (334)
..++||++++.. ..+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ .
T Consensus 193 ~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~t-G-~GrtG~~~a~ 270 (442)
T PRK13360 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT-G-FGRLGAPFAA 270 (442)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCccchhh
Confidence 145788888643 246789999999999999988 9999999999999999999997 4 58888876 4
Q ss_pred cccCCCCCccEEEecCccccc
Q 019931 305 EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G 325 (334)
+++++.| ||+ ||+|++|
T Consensus 271 ~~~gv~P--Div--t~gK~l~ 287 (442)
T PRK13360 271 QYFGVTP--DLL--TCAKGLT 287 (442)
T ss_pred hhcCCCC--cee--eeeeccc
Confidence 7888877 455 8999996
No 82
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=6.2e-20 Score=179.67 Aligned_cols=158 Identities=18% Similarity=0.178 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+++||+++++++|.+++++|+||++|+..++.+++++ ||.|++....|.++...++.. ...+
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~--------------GD~Vlv~~~~y~~~~~~~~~~-~~~g 116 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKA--------------GDRVVLPMEAYGTTLRLLKSL-EKFG 116 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEcCCCchhHHHHHHHh-hccC
Confidence 4677999999999999999999999999999999888764 788888888888877666433 2236
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
+++..+. .|++++++++++ .++++|++++++||+|.+.|+++|+++|+++|+++|+|++|+.++..+ +
T Consensus 117 ~~v~~~~-~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---------~ 184 (385)
T PRK08574 117 VKVVLAY-PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---------P 184 (385)
T ss_pred cEEEEEC-CCHHHHHHhcCc--cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---------h
Confidence 6666554 478889888864 268999999999999999999999999999999999999998875421 2
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+++ .||++++
T Consensus 185 l~~GaDivv~S~sK~l~g~~d~~gG~vi~ 213 (385)
T PRK08574 185 LRHGADFVVHSLTKYIAGHNDVVGGVAVA 213 (385)
T ss_pred hhhCCcEEEeeCceeecCCCCceeEEEEE
Confidence 234579999999999975 4785443
No 83
>PLN00144 acetylornithine transaminase
Probab=99.84 E-value=1.4e-19 Score=177.00 Aligned_cols=215 Identities=20% Similarity=0.205 Sum_probs=150.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
+|.+|++||||.++ ..||.+ ||+|.+|+.+. ......+.. ..++...+|.++|++..+.+.+++++||++|+.
T Consensus 10 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e 86 (382)
T PLN00144 10 YDVEGKEYLDMAAGIAVNALGHG-DPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASSFADRVFFCNSGTEANE 86 (382)
T ss_pred EeCCCCEEEECCcCHHhccCCCC-CHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHH
Confidence 46788999999876 347774 89999977543 333222221 125666889999999887788899999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCC------CCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCCCHHHHHHH
Q 019931 180 AVIVAVGNIASLLAGDEKSFKD------EKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHCDMSHLKTL 245 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~------~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~D~~~Le~~ 245 (334)
++++..... +......++ +..+|.....+|+.....+.++.... ...+..++++|+++|+++
T Consensus 87 ~AlklAr~~----~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 162 (382)
T PLN00144 87 AAIKFARKY----QRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKL 162 (382)
T ss_pred HHHHHHHHH----HhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHh
Confidence 999965431 100000000 24567778889998766655442100 012456678899999998
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecC
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTL 320 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~Sl 320 (334)
++. .+.++|++|++.++.|...| +++|+++|++||++||+||+|+. +|++|.++. +++++.|+ +.||
T Consensus 163 ~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg--~gr~g~~~~~~~~~~~PD----i~t~ 234 (382)
T PLN00144 163 IQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCG--LGRTGYLWAHEAYGVEPD----IMTL 234 (382)
T ss_pred cCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchHhhhhhcCCCCC----EEEe
Confidence 853 36789999999998665443 88999999999999999999984 788887654 46788775 5699
Q ss_pred cccccC--CccEEee
Q 019931 321 SKAAGC--QGGFIAC 333 (334)
Q Consensus 321 sKa~G~--~GG~i~~ 333 (334)
||+++. ..|++++
T Consensus 235 sK~l~~G~pig~v~~ 249 (382)
T PLN00144 235 AKPLAGGLPIGAVLV 249 (382)
T ss_pred cccccCCcceEEEEE
Confidence 999963 3455554
No 84
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.84 E-value=1.3e-19 Score=177.14 Aligned_cols=160 Identities=20% Similarity=0.194 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|++++|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~--------------Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQA--------------GDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEecCCcchHHHHHHHHHHHhC
Confidence 4667999999999999999999999999999999988764 67777777777654433321111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++.+|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|++||+|++|+.+++.. +
T Consensus 119 ~~v~~v~~~d~~~l~~~i~~---~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~---------p 186 (380)
T TIGR01325 119 IEVSFVDPTDLNAWEAAVKP---NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ---------P 186 (380)
T ss_pred CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------c
Confidence 88888888899999988864 78999999999999999999999999999999999999998664321 1
Q ss_pred CCCCccEEEecCcccccC----CccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+..++||++.|++|.+++ .||+++++
T Consensus 187 l~~g~Divv~S~sK~l~g~g~~~gG~vv~~ 216 (380)
T TIGR01325 187 LKLGADVVVYSATKHIDGQGRVMGGVIAGS 216 (380)
T ss_pred hhhCCCEEEeeccceecCCCCeEEEEEEeC
Confidence 233568999999999976 35888764
No 85
>PRK06149 hypothetical protein; Provisional
Probab=99.84 E-value=7.4e-20 Score=197.49 Aligned_cols=203 Identities=18% Similarity=0.143 Sum_probs=146.9
Q ss_pred hhcccceeEEEeecCccCCCC-CCHHHHHHHH-HhcCCCCccccccCchHHHHHHHHHHHhHh--CCCcEEEeccHHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLS-SHPTIAKAAA-RHGMGPRGSALICGYTNYHRLLESCLADLK--KKEDCLLCPTGFAAN 178 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~-~~p~v~~a~~-~~g~g~~~sr~~~G~~~~~~~LE~~La~~~--g~e~alv~~sG~~An 178 (334)
.++.+|++||||.++ |..++ +||+|.+|+. +.+.+...+++ ..+.+.+|+++|++++ +.+.+++++||++||
T Consensus 579 l~D~dG~~ylD~~~~-~~~lGh~hp~v~~Ai~~q~~~l~~~~~~---~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~ 654 (972)
T PRK06149 579 LFDMAGRSYLDMVNN-VTVLGHGHPRLAAAAARQWSLLNTNSRF---HYAAVAEFSERLAALAPDGLDTVFLVNSGSEAN 654 (972)
T ss_pred EEeCCCCEEEECCCC-ccccCCCCHHHHHHHHHHHHhccccccc---cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence 457889999999865 55666 6999999774 55555444443 3477899999999998 457889999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh-----c---C---CcEEEE--------eeCCC-
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER-----T---K---MVEVFV--------YKHCD- 238 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~-----~---~---g~~v~~--------~~~~D- 238 (334)
.++++.... .+++.++|..+..+|+.......++.. . . +...+. |+++|
T Consensus 655 e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~ 723 (972)
T PRK06149 655 DLAIRLAWA-----------ASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADS 723 (972)
T ss_pred HHHHHHHHH-----------hcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCccc
Confidence 999985432 234678899999999876554433210 0 0 001111 22233
Q ss_pred ----HHHHHHHHhc---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc--ccc
Q 019931 239 ----MSHLKTLLSC---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG--VAE 305 (334)
Q Consensus 239 ----~~~Le~~l~~---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g--~~~ 305 (334)
.+++++.++. ...+..+|++|+++++.|.+.| |++|+++|++||+++|+||+|+ | +|++|.. .++
T Consensus 724 ~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~t-G-fGRtG~~~~a~e 801 (972)
T PRK06149 724 AADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQV-G-YGRLGHYFWGFE 801 (972)
T ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehh-c-CCccCccchhhh
Confidence 3555555542 2246789999999999999888 9999999999999999999996 3 6788863 357
Q ss_pred ccCCCCCccEEEecCcccccC
Q 019931 306 QFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++.| ||+ ||+|++|.
T Consensus 802 ~~gv~P--Div--t~gK~lg~ 818 (972)
T PRK06149 802 QQGVVP--DII--TMAKGMGN 818 (972)
T ss_pred hcCCCC--CEE--EecccccC
Confidence 889877 565 89999973
No 86
>PRK05939 hypothetical protein; Provisional
Probab=99.84 E-value=1.8e-19 Score=177.04 Aligned_cols=155 Identities=17% Similarity=0.158 Sum_probs=125.8
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|+++.|.+.+++|+||+.|+..++.+++++ ||.|++....|++....+.... ..|
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~--------------Gd~Vv~~~~~y~~t~~~~~~l~-~~G 110 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRA--------------GDHLVSSQFLFGNTNSLFGTLR-GLG 110 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCC--------------CCEEEECCCccccHHHHHHHHH-hcC
Confidence 4777999999999999999999999999999999888765 7778877776654332222111 228
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|+++|++++++ ++++|++++++|++|.+.|+++|+++|+++|+++|+|++|+.+.. ..+
T Consensus 111 ~~v~~v~~~d~e~l~~~l~~---~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~---------~~~ 178 (397)
T PRK05939 111 VEVTMVDATDVQNVAAAIRP---NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL---------FRP 178 (397)
T ss_pred CEEEEECCCCHHHHHHhCCC---CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc---------cCc
Confidence 89999998999999998864 789999999999999999999999999999999999999976521 112
Q ss_pred CCCCccEEEecCcccccCCccE
Q 019931 309 CERDVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~GG~ 330 (334)
...++||++.|++|.+++.|+.
T Consensus 179 ~~~gaDivv~S~sK~~~g~g~~ 200 (397)
T PRK05939 179 KDVGASLVINSLSKYIAGHGNA 200 (397)
T ss_pred cccCCEEEEecCeecccCCCCe
Confidence 2346899999999999876543
No 87
>PRK06105 aminotransferase; Provisional
Probab=99.84 E-value=1.3e-19 Score=181.10 Aligned_cols=211 Identities=19% Similarity=0.165 Sum_probs=145.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ..||.+ ||+|.+|++++- .....+......++...+|.++|+++++ .+++++++||++|
T Consensus 43 ~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA 121 (460)
T PRK06105 43 YDDAGKRYIEGMAGLWSVALGFS-EQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEA 121 (460)
T ss_pred EECCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 56788999999875 457774 899999876542 2221111111236777899999999875 3578888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC-----C---cEEEEeeCC------------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK-----M---VEVFVYKHC------------ 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~-----g---~~v~~~~~~------------ 237 (334)
|.++++....... .. -.+++..+|..+..+|+....++.++.... + ..+..++..
T Consensus 122 ve~AlKlar~~~~--~~---g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 196 (460)
T PRK06105 122 NDTVVKLVWYYNN--AL---GRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESE 196 (460)
T ss_pred HHHHHHHHHHHHH--hc---CCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCCh
Confidence 9999997532100 00 012346677788999998766654432110 0 011112111
Q ss_pred ------CHHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 238 ------DMSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 238 ------D~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
..+++|+++... ..+..+|++|++++..|.+.| |++|+++|++||++||+||+|+. +|++|.++ .+
T Consensus 197 ~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG--~GRtG~~f~~~ 274 (460)
T PRK06105 197 EAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICG--FGRTGNMFGCE 274 (460)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccC--CCcCchhhhHH
Confidence 136678887532 246789999999999998877 99999999999999999999963 67888776 46
Q ss_pred ccCCCCCccEEEecCcccccC
Q 019931 306 QFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++.|| |+ +|+|++|.
T Consensus 275 ~~~v~PD--i~--~~gK~lgg 291 (460)
T PRK06105 275 TFGIKPD--IL--VMSKQLSS 291 (460)
T ss_pred hcCCCCC--ee--eeeccccc
Confidence 7888874 55 89999963
No 88
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.2e-19 Score=177.65 Aligned_cols=159 Identities=18% Similarity=0.111 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.|..+.||++|+++.|.+.+++|+||+.|+.+++.+++++ ||.|++....|..+...+.......|
T Consensus 61 nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~--------------GD~Vv~~~~~Yg~t~~l~~~~l~~~G 126 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQ--------------GDHVLMTGTAYEPTQDFCSKILSKLG 126 (395)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCC--------------CCEEEEeCCCcHHHHHHHHHHHHhcC
Confidence 5788999999999999999999999999999999888765 77788777777776655542222348
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC--CEEEEecCcccccccCCCcccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG--FLLVLDDAHGTFVCGKNGGGVAEQ 306 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g--a~LivDeAh~~Gv~G~~G~g~~~~ 306 (334)
.++..++..|++++++++++ +|++|++|+++||+|.+.|+++|+++|+++| ++++||++++.+++ .
T Consensus 127 i~v~~vd~~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~---------~ 194 (395)
T PRK08114 127 VTTTWFDPLIGADIAKLIQP---NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL---------F 194 (395)
T ss_pred cEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc---------c
Confidence 89999999999999999875 7899999999999999999999999999985 99999999998753 1
Q ss_pred cCCCCCccEEEecCcccccCC----ccEEee
Q 019931 307 FNCERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
.....++||++.|.+|.+++. ||++++
T Consensus 195 ~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~ 225 (395)
T PRK08114 195 KALDFGIDISIQAGTKYLVGHSDAMIGTAVA 225 (395)
T ss_pred CHHHcCCcEEEEcCcccccCCCcceeEEEEc
Confidence 123356899999999999764 465553
No 89
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.83 E-value=1.8e-19 Score=178.14 Aligned_cols=154 Identities=17% Similarity=0.159 Sum_probs=122.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|++++|.+.+++++||++|+..++.+++++ ||.|++....|......+.......|
T Consensus 56 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~--------------Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQA--------------GDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCC--------------CCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3667899999999999999999999999999999888764 67676666555443332221111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++.+|++++++++++ ++++|++++++||+|.+.|+++|+++|+++|+++|+|++|+.+.+. ..
T Consensus 122 ~~v~~v~~~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~---------~~ 189 (418)
T TIGR01326 122 IEVRFVDPDDPEEFEKAIDE---NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC---------RP 189 (418)
T ss_pred cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC---------Cc
Confidence 88989998899999998864 6899999999999999999999999999999999999999865321 11
Q ss_pred CCCCccEEEecCcccccCCc
Q 019931 309 CERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~G 328 (334)
+..++||++.||+|.+|+.|
T Consensus 190 l~~g~Divv~S~sK~l~g~G 209 (418)
T TIGR01326 190 IDHGADIVVHSATKYIGGHG 209 (418)
T ss_pred hhcCCeEEEECccccccCCc
Confidence 23357999999999998744
No 90
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=1.8e-19 Score=180.18 Aligned_cols=216 Identities=19% Similarity=0.146 Sum_probs=147.0
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
+|.+|++||||.++ ..||.+ ||+|.+|+++. ......... ...++...+|.++|+++.+ .+++++++||++|
T Consensus 47 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA 124 (460)
T PRK06541 47 WDDRGKRYLDGLAGLFVVQVGHG-RAELAEAAAKQAGTLAFFPLW-SYAHPPAIELAERLAALAPGDLNRVFFTTGGSEA 124 (460)
T ss_pred EeCCCCEEEECCccHHhccCCCC-CHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHH
Confidence 46788999999875 457884 89999987654 222111111 1235667889999999875 3678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC--------CC-
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH--------CD- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~--------~D- 238 (334)
+.++++....... .++ .+++..+|.....+|+.....+.++... .+...+.+++ ++
T Consensus 125 ve~AlklAr~~~~-~~g----~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 199 (460)
T PRK06541 125 VESAWKLAKQYFK-LTG----KPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDP 199 (460)
T ss_pred HHHHHHHHHHHHH-hcC----CCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCH
Confidence 9999986432100 000 0124567778888999876655543110 0111111111 22
Q ss_pred -------HHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 239 -------MSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 239 -------~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
++.+++++++. +.+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+. +|++|.++ .+
T Consensus 200 ~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG--fGR~G~~~a~~ 277 (460)
T PRK06541 200 EAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICA--FGRLGEMFGCE 277 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcCchhhhhh
Confidence 26788888642 246789999999999999888 99999999999999999999963 57778765 46
Q ss_pred ccCCCCCccEEEecCcccccC----CccEEe
Q 019931 306 QFNCERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
++++.| ||+ ||+|++|. .|++++
T Consensus 278 ~~gv~P--Div--t~gK~l~~G~~pigav~~ 304 (460)
T PRK06541 278 RFGYVP--DII--TCAKGITSGYSPLGAMIA 304 (460)
T ss_pred hcCCCC--CEE--EecccccCCccceeEEEE
Confidence 788877 555 79999972 455554
No 91
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.83 E-value=2.4e-19 Score=173.82 Aligned_cols=202 Identities=19% Similarity=0.194 Sum_probs=150.9
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC-CcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK-EDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~-e~alv~~sG~~A 177 (334)
.+|.+|++||||+-. ..||. .||.|++|+++. ..|.. +...++.-.++.+.|.+.++. |.+-+++||++|
T Consensus 47 l~DvDGn~YIDy~~~~Gp~ilGH-~~p~V~~Av~~~l~~G~~----fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEA 121 (432)
T COG0001 47 LTDVDGNEYIDYVLGWGPLILGH-AHPAVVEAVQEQLERGLS----FGAPTELEVELAELLIERVPSIEKVRFVNSGTEA 121 (432)
T ss_pred EEeCCCCEeeehhccCcccccCC-CCHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHHhcCcccEEEEecchhHH
Confidence 468999999999764 35566 488899988653 34431 222245556788999999886 899999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------C------CcEEEEeeCCCHHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------K------MVEVFVYKHCDMSHL 242 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~------g~~v~~~~~~D~~~L 242 (334)
++.+|+. ++. .|+++.+|.++..+|+..=..+--+... . -..+..++.||++.+
T Consensus 122 tmsAiRl-ARa----------~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al 190 (432)
T COG0001 122 TMSAIRL-ARA----------YTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEAL 190 (432)
T ss_pred HHHHHHH-HHH----------hhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHH
Confidence 9999985 442 4567888888988997632221111000 0 124667889999999
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEe
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVG 318 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~ 318 (334)
++++++.+.+...|++|++-+..|.+.| |++|++||++||++||.||+++..-+. -.|.-.+|++.|| +.
T Consensus 191 ~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~--~gGaq~~~gi~PD----lt 264 (432)
T COG0001 191 EEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVA--LGGAQGYYGVEPD----LT 264 (432)
T ss_pred HHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccC--CcccccccCcCcc----hh
Confidence 9999987668899999999998898877 889999999999999999999843222 1345568999986 45
Q ss_pred cCcccccC
Q 019931 319 TLSKAAGC 326 (334)
Q Consensus 319 SlsKa~G~ 326 (334)
||+|.+|.
T Consensus 265 tlGKiIGG 272 (432)
T COG0001 265 TLGKIIGG 272 (432)
T ss_pred hhhhhhcC
Confidence 99999973
No 92
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.83 E-value=1.9e-19 Score=177.96 Aligned_cols=208 Identities=20% Similarity=0.203 Sum_probs=146.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An 178 (334)
+|.+|++||||.++ ..||. +||+|++++.+.. .+. . ++..++...+|.++|+++++ .+++++++||++|+
T Consensus 43 ~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~---~-~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~ 117 (423)
T TIGR00713 43 YDVDGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALERGT---S-YGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEAT 117 (423)
T ss_pred EeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC---c-CCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHH
Confidence 56788999999875 23666 5899999876543 332 1 22235667899999999876 35788889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------c------CCcEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---------T------KMVEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~------~g~~v~~~~~~D~~~Le 243 (334)
.++++....- +++..+|..+..+|+.......++.. . ....++.++++|+++|+
T Consensus 118 e~Alk~ar~~-----------~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 186 (423)
T TIGR00713 118 MSAVRLARGY-----------TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALE 186 (423)
T ss_pred HHHHHHHHHh-----------hCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHH
Confidence 9999864431 23466777788888853222211100 0 01235667889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEec
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGT 319 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~S 319 (334)
+++++...++++|++|++++++|.+.| +++|+++|++||++||+||+|....+|. .+..+++++.| ||+ |
T Consensus 187 ~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~--~~~~~~~~~~p--Di~--t 260 (423)
T TIGR00713 187 EVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL--GGAQEYFGVEP--DLT--T 260 (423)
T ss_pred HHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc--chhHHHhCCCc--chh--h
Confidence 999754346789999999999998877 7899999999999999999996322221 23345677766 444 8
Q ss_pred CcccccC--CccEEee
Q 019931 320 LSKAAGC--QGGFIAC 333 (334)
Q Consensus 320 lsKa~G~--~GG~i~~ 333 (334)
|||++|. ..|++++
T Consensus 261 ~sK~l~~G~pig~v~~ 276 (423)
T TIGR00713 261 LGKIIGGGLPVGAFGG 276 (423)
T ss_pred hhhhhcCCCceeeeeE
Confidence 9999973 2467665
No 93
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.83 E-value=1.3e-19 Score=178.23 Aligned_cols=160 Identities=18% Similarity=0.141 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++||+++|.+.+++++||++|+..++.+++++ ||.|++....+......+.......+
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~--------------Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKA--------------GDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCC--------------CCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 3667999999999999999999999999998888777654 77788777666654433322112237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+++.. .
T Consensus 130 ~~v~~vd~~d~e~l~~ai~~---~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~---------~ 197 (398)
T PRK07504 130 IESTLVDGLDLDNWEKAVRP---NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK---------P 197 (398)
T ss_pred eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC---------c
Confidence 88888888899999998864 78999999999999999999999999999999999999999775421 1
Q ss_pred CCCCccEEEecCcccccC----CccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+..++|+++.|++|.|++ .||+|+++
T Consensus 198 ~~~gaDivv~S~sK~l~g~g~~~GG~vv~~ 227 (398)
T PRK07504 198 LELGAHIVVYSATKHIDGQGRCLGGVVLSD 227 (398)
T ss_pred hhhCCCEEEeeccccccCCccceEEEEEeC
Confidence 223579999999999975 46788764
No 94
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.8e-19 Score=176.56 Aligned_cols=159 Identities=18% Similarity=0.119 Sum_probs=129.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 60 ~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~--------------Gd~Vl~~~~~y~~t~~~~~~~~~~~g 125 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRP--------------GDHIVIPNDAYGGTFRLIDKVFTRWG 125 (388)
T ss_pred CccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCC--------------CCEEEEcCCCchHHHHHHHHhCcCCC
Confidence 3667899999999999999999999999999999998764 77888877777755443332222237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|+++|++++++ ++++|++++++||+|.+.|+++|.++|+++|++||+|++|+.+..+. .
T Consensus 126 i~~~~~d~~d~e~l~~~i~~---~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---------p 193 (388)
T PRK07811 126 VEYTPVDLSDLDAVRAAITP---RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ---------P 193 (388)
T ss_pred eEEEEeCCCCHHHHHHhcCc---CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC---------c
Confidence 78888888899999998864 78999999999999999999999999999999999999998764421 1
Q ss_pred CCCCccEEEecCcccccCC----ccEEee
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
+..++||++.|++|.+++. ||+|++
T Consensus 194 ~~~gaDivv~S~sK~l~g~~~~~gG~vv~ 222 (388)
T PRK07811 194 LALGADVVVHSTTKYIGGHSDVVGGALVT 222 (388)
T ss_pred hhhCCcEEEecCceeecCCCCcEEEEEEE
Confidence 2235789999999999863 687765
No 95
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.83 E-value=3.4e-19 Score=175.93 Aligned_cols=205 Identities=19% Similarity=0.179 Sum_probs=143.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHh--C--C-CcEEEe-c
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLK--K--K-EDCLLC-P 172 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~--g--~-e~alv~-~ 172 (334)
+|.+|++||||.++ ..||. +||+|.+|+++.-. +.... . ...++...+|.++|++.. + . ..++++ +
T Consensus 30 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~~-~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 30 WDEDGKEYIDFFAGAGALNYGH-NNPKLKQALIDYLADDGIIHS-L-DMATEAKREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred EeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhccceec-c-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCC
Confidence 56788999999875 34677 59999998865422 22111 1 112566688999998864 2 2 245565 8
Q ss_pred cHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC---cEEEEeeC--------
Q 019931 173 TGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM---VEVFVYKH-------- 236 (334)
Q Consensus 173 sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g---~~v~~~~~-------- 236 (334)
||++|+.++++.... .+++..+|.....+|+.....+.++... .+ ..+..++.
T Consensus 107 sGseA~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 175 (412)
T TIGR02407 107 TGTNAVESALKLARK-----------VTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDV 175 (412)
T ss_pred CchHHHHHHHHHHhh-----------hcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccch
Confidence 999999999996443 2345567778888999877666554210 01 12233333
Q ss_pred CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccC
Q 019931 237 CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFN 308 (334)
Q Consensus 237 ~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~ 308 (334)
++++.+++++.+.. .+..+|++|++.++.|.+.| +++|+++|++||++||+||+++ | +|++|.+++ ++++
T Consensus 176 ~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~~a~~~~~ 253 (412)
T TIGR02407 176 DTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-G-CGRTGTFFSFEPAG 253 (412)
T ss_pred hHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhHHhcccC
Confidence 34777888886532 25688999999999997543 8999999999999999999998 5 799998764 6678
Q ss_pred CCCCccEEEecCcccccCCc
Q 019931 309 CERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~G 328 (334)
+.| ||+ +|+|++|+.|
T Consensus 254 v~P--Di~--~~~K~lg~~G 269 (412)
T TIGR02407 254 IEP--DIV--CLSKSISGYG 269 (412)
T ss_pred CCC--CEE--EechhccCCc
Confidence 877 455 7999998633
No 96
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=4.7e-19 Score=176.39 Aligned_cols=211 Identities=18% Similarity=0.198 Sum_probs=146.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
+|.+|++||||.++ ..||. +||+|.+|+.+. ..+...+.. ...++...+|.++|++..+. +++++++||++|
T Consensus 36 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEA 113 (443)
T PRK08360 36 WDIEGNEYIDFLSDAAVQNVGH-NNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDA 113 (443)
T ss_pred EECCCCEEEEccccHhhcccCC-CCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHH
Confidence 56788999999775 45777 489999977543 333222211 22356778999999998764 578888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH----------- 236 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~----------- 236 (334)
+.++++.... .+++..+|.....+|+.....+.++... .+.....|+.
T Consensus 114 ve~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (443)
T PRK08360 114 NDGAIKFARA-----------YTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPG 182 (443)
T ss_pred HHHHHHHHHH-----------hcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchh
Confidence 9999995432 2345667777888999876655543210 0111122221
Q ss_pred ----CCHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-c
Q 019931 237 ----CDMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-E 305 (334)
Q Consensus 237 ----~D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~ 305 (334)
++.+.+++++++. ..++++|++|++.+++|.+.| +++|.++|++||++||+||+|+. +|++|.+++ +
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--~gr~G~~~a~~ 260 (443)
T PRK08360 183 SCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSG--LGRTGKWFAIE 260 (443)
T ss_pred hhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCccchhhh
Confidence 1244566777532 246899999999999997766 88999999999999999999994 788887653 5
Q ss_pred ccCCCCCccEEEecCcccccC--CccEEee
Q 019931 306 QFNCERDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
++++.| ||+ ||||++|. ..|++++
T Consensus 261 ~~~~~p--Dii--tlsK~l~~G~pigav~~ 286 (443)
T PRK08360 261 HFGVEP--DII--TLGKPLGGGLPISATIG 286 (443)
T ss_pred hcCCCC--CEE--EecccccCCceeEEEEE
Confidence 678776 454 89999984 2366665
No 97
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=8.9e-19 Score=173.58 Aligned_cols=211 Identities=15% Similarity=0.159 Sum_probs=144.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~ 176 (334)
+|.+|++||||.++ ..||. +||+|.+|+++. ........ ....++...+|.++|+++.+. +++++++||++
T Consensus 35 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGse 112 (425)
T PRK07495 35 WDKEGRRYIDFAAGIAVVNTGH-RHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAE 112 (425)
T ss_pred EeCCCCEEEEccccHHhhccCC-CCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHH
Confidence 46778999999875 34777 589999987653 22221111 122356668899999998753 57888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----cCC-----cEEEEeeCCC---------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----TKM-----VEVFVYKHCD--------- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~~g-----~~v~~~~~~D--------- 238 (334)
||.++++.... .+++..+|.....+|+.....+.++.. ..+ ..+..++.++
T Consensus 113 A~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 181 (425)
T PRK07495 113 AVENAVKIARA-----------ATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQ 181 (425)
T ss_pred HHHHHHHHHHH-----------hhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHH
Confidence 99999996443 234566777888899987655544321 000 1222333322
Q ss_pred -HHHHHHHHhc--CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCC
Q 019931 239 -MSHLKTLLSC--CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCE 310 (334)
Q Consensus 239 -~~~Le~~l~~--~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~ 310 (334)
.+++++++++ .+.+.++|++|++++..|.+.| +++|+++|++||++||+||+|+ | +|++|.++ .+++++.
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~a~~~~gv~ 259 (425)
T PRK07495 182 SLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-G-FARTGKLFAMEHHEVA 259 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-c-CCcCCCceeecccCCC
Confidence 4556777753 1246789999999998885543 8899999999999999999998 5 78888764 4567776
Q ss_pred CCccEEEecCcccccC--CccEEee
Q 019931 311 RDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 311 ~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
| || .||||++|. ..|++++
T Consensus 260 p--Di--~tlsK~l~~G~pigav~~ 280 (425)
T PRK07495 260 A--DL--TTMAKGLAGGFPLAAVTG 280 (425)
T ss_pred C--CE--EeehhhhcCCccceEEEE
Confidence 6 44 599999973 2345554
No 98
>PRK07480 putative aminotransferase; Validated
Probab=99.82 E-value=4.5e-19 Score=177.09 Aligned_cols=218 Identities=18% Similarity=0.176 Sum_probs=146.7
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.+. ..+|.. ||+|.+|+++. ..+...+......++...+|.++|+++.+ .+++++++||++
T Consensus 44 l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 122 (456)
T PRK07480 44 LWDSEGNKILDGMAGLWCVNVGYG-RKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSE 122 (456)
T ss_pred EEeCCCCEEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHH
Confidence 356788999999875 346774 89999977543 33222222222346888999999999885 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC---cEEEEeeCC-----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM---VEVFVYKHC----------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g---~~v~~~~~~----------- 237 (334)
|++++++....... ..+ .+++..+|..+..+|+....++.++... .+ ..+..++..
T Consensus 123 A~e~AlklAr~~~~--~~g---~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 197 (456)
T PRK07480 123 ANDTVLRMVRHYWA--LKG---KPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTP 197 (456)
T ss_pred HHHHHHHHHHHHHH--hcC---CCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCCh
Confidence 99999986533100 000 0123456667888999876665543210 00 011111110
Q ss_pred ----C--HHHHHHHHhc-CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 238 ----D--MSHLKTLLSC-CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 238 ----D--~~~Le~~l~~-~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
| .++|++.+.+ ...+..+|++|++.+..|.+.| |++|++||++||++||+||+++ | +|++|.++ .+
T Consensus 198 ~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G-fGRtG~~~a~~ 275 (456)
T PRK07480 198 EEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-G-FGRTGEWFGSQ 275 (456)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcCcchhhhh
Confidence 1 2566655532 2346789999999999888766 9999999999999999999998 4 79999876 47
Q ss_pred ccCCCCCccEEEecCcccccC----CccEEe
Q 019931 306 QFNCERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
++++.|| |+ +|+|++|. .|++++
T Consensus 276 ~~gv~PD--iv--~~gK~l~gG~~Pi~av~~ 302 (456)
T PRK07480 276 HFGIKPD--LM--TIAKGLTSGYIPMGAVGV 302 (456)
T ss_pred hcCCCCC--ee--eeehhhccCCccceEEEE
Confidence 8898874 54 89999963 455544
No 99
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.82 E-value=4.4e-19 Score=176.71 Aligned_cols=209 Identities=18% Similarity=0.164 Sum_probs=144.4
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||.+. ..||. +||+|.+++++. ......+.... .++...+|.++|+++.+ .+++++++||++|
T Consensus 44 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~~~~-~~~~~~~la~~L~~~~p~~~~~v~f~~sGseA 121 (445)
T PRK09221 44 TDADGRKILDGTAGLWCCNAGH-GRPEIVEAVARQAATLDYAPAFQM-GHPLAFELAERLAELAPGGLDHVFFTNSGSES 121 (445)
T ss_pred EeCCCCEEEEccccHhhccCCC-CCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 56788999999775 45777 589999877543 22222222222 24666889999999874 4678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeCC----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKHC---------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~~---------- 237 (334)
+.++++....- +.... ..++..+|.....+|+.....+.++... .+...+.++.+
T Consensus 122 ve~AlklAr~~----~~~~g-~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
T PRK09221 122 VDTALKIALAY----HRARG-QGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQ 196 (445)
T ss_pred HHHHHHHHHHH----HHhcC-CCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCCh
Confidence 99999864431 00000 0123456777888998766554433100 01111111110
Q ss_pred ------CHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 238 ------DMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 238 ------D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
..++|+++++... .+..+|++|+++++.|.+.| |++|+++|++||++||+||+|+ | +|++|.++ .+
T Consensus 197 ~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~~~~~ 274 (445)
T PRK09221 197 PEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-G-FGRLGAAFAAE 274 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-C-CCcCchhhHHH
Confidence 1357888886542 46789999999999999988 9999999999999999999998 5 88999886 57
Q ss_pred ccCCCCCccEEEecCccccc
Q 019931 306 QFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G 325 (334)
++++.| ||+ +|+|+++
T Consensus 275 ~~gv~P--Di~--~~gK~l~ 290 (445)
T PRK09221 275 RFGVTP--DII--TFAKGLT 290 (445)
T ss_pred hcCCCC--CEE--Eeccccc
Confidence 888877 554 8999995
No 100
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=5.4e-19 Score=173.22 Aligned_cols=158 Identities=16% Similarity=0.121 Sum_probs=125.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++||++.+.+.+++++||++|+..++.+++++ ||.|++....|.....-+.......|
T Consensus 60 npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~--------------GD~Vvv~~~~Y~~t~~l~~~~l~~~G 125 (394)
T PRK09028 60 TPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKA--------------GDHLLMVDSCYEPTRDLCDKILKGFG 125 (394)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEECCCcHHHHHHHHHhhhhcc
Confidence 3566899999999999999999999999999999988775 67676655556554432211111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|.+.+++++++ ++++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.++. ..+
T Consensus 126 i~v~~v~~~~~e~l~~~l~~---~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~---------~~P 193 (394)
T PRK09028 126 IETTYYDPMIGEGIRELIRP---NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN---------SRP 193 (394)
T ss_pred eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc---------CCc
Confidence 78888887788889888864 799999999999999999999999999999999999999997642 123
Q ss_pred CCCCccEEEecCcccccCC----ccEEe
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIA 332 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~ 332 (334)
+..++||++.|++|.+++. ||+++
T Consensus 194 l~~GaDivv~S~tK~l~Gh~d~~~G~~~ 221 (394)
T PRK09028 194 FEMGVDISIQAATKYIVGHSDVMLGTAT 221 (394)
T ss_pred cccCceEEEEeCCeEecCCCCEEEEEEE
Confidence 3456899999999999875 46554
No 101
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.6e-19 Score=176.49 Aligned_cols=158 Identities=19% Similarity=0.200 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 62 ~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~p--------------Gd~VIv~~~~y~~t~~~~~~~~~~~G 127 (427)
T PRK05994 62 NPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQP--------------GDEFIAARKLYGGSINQFGHAFKSFG 127 (427)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCC--------------CCEEEEecCcchhHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999999988765 67777776666654433321111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+... ..
T Consensus 128 ~~v~~vd~~d~~~l~~ai~~---~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~---------~p 195 (427)
T PRK05994 128 WQVRWADADDPASFERAITP---RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI---------RP 195 (427)
T ss_pred cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC---------Cc
Confidence 88888888899999998864 7899999999999999999999999999999999999999876431 12
Q ss_pred CCCCccEEEecCcccccC----CccEEe
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
+..++|+++.|++|.+|+ .||+|+
T Consensus 196 l~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 196 IEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred cccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 334689999999999986 456665
No 102
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.82 E-value=3.3e-19 Score=170.40 Aligned_cols=191 Identities=15% Similarity=0.165 Sum_probs=148.4
Q ss_pred CCCCHHHHHHHHHhcCC--CCccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHHHHHHHhhhhhhccC
Q 019931 122 LSSHPTIAKAAARHGMG--PRGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMAVIVAVGNIASLLAG 194 (334)
Q Consensus 122 l~~~p~v~~a~~~~g~g--~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~ai~al~~~~~~~~~ 194 (334)
...+.-|.+++++...+ ...+...+|...+...|.+++++++|. ++++++.++++|+..++.+++++
T Consensus 43 ~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~------ 116 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNP------ 116 (420)
T ss_pred CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCC------
Confidence 33344466677665433 234455677788889999999998873 45888899999999999999976
Q ss_pred CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------------CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 195 DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------------CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 195 ~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------------~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
||.|++-++++.+.+..++++ |.+.+.++. .|++.||.++.+ +|++|++++|
T Consensus 117 --------GDeVii~eP~fd~Y~~~~~ma----G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~---kTk~Ii~ntP 181 (420)
T KOG0257|consen 117 --------GDEVIVFEPFFDCYIPQVVMA----GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE---KTKAIILNTP 181 (420)
T ss_pred --------CCEEEEecCcchhhhhHHhhc----CCcceeeccccccccccCccccCChHHHHhhccC---CccEEEEeCC
Confidence 788888888888999888888 666665542 389999999986 8999999999
Q ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 262 FSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+||+|.+.+ |++|++||++||.++|.||+|...++... ---++...| ..+..|-++|+||+||++| ||++++
T Consensus 182 hNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPg-m~ertitvgS~gKtf~~TGWrlGW~igp 260 (420)
T KOG0257|consen 182 HNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPG-MYERTITVGSFGKTFGVTGWRLGWAIGP 260 (420)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCc-hhheEEEeccccceeeeeeeeeeeeech
Confidence 999999988 88999999999999999999998777532 111221222 2345689999999999999 988763
No 103
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=5.5e-19 Score=173.04 Aligned_cols=159 Identities=16% Similarity=0.129 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+....||++||++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 52 npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~--------------Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 52 NPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGP--------------DDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred CchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCC--------------CCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 3667999999999999999999999999999999988764 78888877777654443322211236
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|..+++. .+
T Consensus 118 i~v~~vd~~d~e~l~~~i~~---~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~---------~p 185 (388)
T PRK08861 118 FKVQFVDQSDAAALDAALAK---KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQ---------KP 185 (388)
T ss_pred eEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccC---------CC
Confidence 78888887899999988864 7899999999999999999999999999999999999999987532 12
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++|+++.|++|.+++ .||+|++
T Consensus 186 l~~GaDivv~S~tK~l~G~~d~~gG~i~~ 214 (388)
T PRK08861 186 LELGADFVIHSTTKYINGHSDVIGGVLIT 214 (388)
T ss_pred cccCCCEEEeecceeccCCCcceeEEEEe
Confidence 334689999999999975 3688765
No 104
>PRK09082 methionine aminotransferase; Validated
Probab=99.82 E-value=8.5e-19 Score=171.27 Aligned_cols=203 Identities=15% Similarity=0.139 Sum_probs=152.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai 182 (334)
..+++|..++ ..+..+|.+.+++++. ..+...+....|...+++++++.+.++++. + .+++++++++|+..++
T Consensus 30 ~~~i~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~ 108 (386)
T PRK09082 30 HGAINLSQGF-PDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAI 108 (386)
T ss_pred CCEEEecCCC-CCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHH
Confidence 5678998864 4555678888876553 233334444567778888888888888774 2 4666678899999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lV 256 (334)
.+++.+ ||.|++..+.|..+...++.. |.+++.++.+ |++++++++++ ++++|
T Consensus 109 ~~~~~~--------------gd~Vli~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v 167 (386)
T PRK09082 109 LALVRP--------------GDEVIVFDPSYDSYAPAIELA----GGRAVRVALQPPDFRVDWQRFAAAISP---RTRLI 167 (386)
T ss_pred HHHcCC--------------CCEEEEeCCCchhhHHHHHHc----CCEEEEEecCcccccCCHHHHHHhcCc---cceEE
Confidence 888764 788999999999888888776 7888888753 67888888753 67888
Q ss_pred EEcCCCCCCCCcc---CHHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 257 VTDSLFSMDGDFA---PMVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 257 v~e~v~n~~G~~~---pL~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
++++++||+|.+. ++++|.++|++||+++|+||+|...+++.. +..+....+. .+..|+++||||+||+.| |
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 246 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL-RERAFVVSSFGKTYHVTGWKVG 246 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc-cCcEEEEeechhhccchhhhhh
Confidence 8899999999774 588899999999999999999987766432 2222222222 234699999999999888 9
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 247 ~iv~~ 251 (386)
T PRK09082 247 YCVAP 251 (386)
T ss_pred hhhCC
Confidence 98764
No 105
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3.4e-19 Score=176.30 Aligned_cols=158 Identities=15% Similarity=0.164 Sum_probs=129.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++++++.|.+++++|+||++|+..++.+++++ ||.|++....+......+.......|
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~--------------GD~VI~~~~~Y~~T~~~~~~~l~~~G 125 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSS--------------GDHLLCSSTVYGGTFNLFGVSLRKLG 125 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCC--------------CCEEEECCCchHHHHHHHHHHHHHCC
Confidence 3777999999999999999999999999999999988764 78888887777655554332212238
Q ss_pred cEEEEeeCC-CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYKHC-DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~~~-D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+++..++.+ |++++++++++ +|++|++|++.||.+.+.|+++|+++|+++|+++|+|++++...+ ..
T Consensus 126 i~v~~vd~~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~---------~~ 193 (432)
T PRK06702 126 IDVTFFNPNLTADEIVALAND---KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL---------CQ 193 (432)
T ss_pred CEEEEECCCCCHHHHHHhCCc---CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh---------CC
Confidence 899888875 89999999975 789999999999999999999999999999999999999875432 12
Q ss_pred CCCCCccEEEecCcccccCC----ccEEe
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIA 332 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~ 332 (334)
++..++||++.|+||.+|+. ||.++
T Consensus 194 pl~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 194 AFEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred hhhcCCCEEEEccccccCCCcceeceEEE
Confidence 34567899999999999763 45554
No 106
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=8e-19 Score=175.32 Aligned_cols=205 Identities=17% Similarity=0.136 Sum_probs=143.3
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~ 176 (334)
.+|.+|++||||.+. ..||. +||+|.+|+.+. ......+.. ...++...+|.++|+++.+. +++++++||++
T Consensus 47 l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsE 124 (457)
T PRK05639 47 IEDVDGNVFIDFLAGAAAASTGY-SHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVAEKLAEISPIENPKVLFGLSGSD 124 (457)
T ss_pred EEeCCCCEEEECCcCHHhhccCC-CCHHHHHHHHHHHHhccccccC-ccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHH
Confidence 356888999999875 45777 589999877543 322211111 11246668899999998753 57888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----cCC-----cEEEEeeCC----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----TKM-----VEVFVYKHC---------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~~g-----~~v~~~~~~---------- 237 (334)
||.++++.... .+++..+|.....+|+.....+.++.. ..+ ..+..++.+
T Consensus 125 A~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 193 (457)
T PRK05639 125 AVDMAIKVSKF-----------STRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGIN 193 (457)
T ss_pred HHHHHHHHHHH-----------hcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccc
Confidence 99999996442 234566777888899987666654321 000 112233332
Q ss_pred ---CH--------HHHHHHHhc---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCC
Q 019931 238 ---DM--------SHLKTLLSC---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKN 299 (334)
Q Consensus 238 ---D~--------~~Le~~l~~---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~ 299 (334)
|. +.|++++.. .+.+...|++|++.+..|.+.| +++|+++|++||++||+||+|+ | +|++
T Consensus 194 ~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G-~Grt 271 (457)
T PRK05639 194 GYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-G-IGRT 271 (457)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCcC
Confidence 22 235554422 1346789999999998887665 8999999999999999999998 6 8999
Q ss_pred Cccc-ccccCCCCCccEEEecCcccccC
Q 019931 300 GGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 300 G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
|.++ .+++++.| ||+ +|+|++|.
T Consensus 272 G~~~a~~~~gv~P--Div--~~gK~l~g 295 (457)
T PRK05639 272 GKWFASEWFEVKP--DLI--IFGKGVAS 295 (457)
T ss_pred chHHHHHhcCCCC--CEE--EechhhcC
Confidence 9886 47889877 566 59999973
No 107
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.82 E-value=3.4e-19 Score=175.42 Aligned_cols=159 Identities=17% Similarity=0.135 Sum_probs=128.3
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++++++.|.+.+++++||+.|+..++.+++++ ||.|++....|..............|
T Consensus 64 ~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~--------------Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRP--------------GDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCC--------------CCEEEEccCccchHHHHHHHHHhhCC
Confidence 3667999999999999999999999999999999887654 78888877777654433321111238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
+++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|++||+|++|+.+..+. .
T Consensus 130 ~~v~~vd~~d~~~l~~~i~~---~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~---------~ 197 (403)
T PRK07503 130 VTVRHVDLTDPAALKAAISD---KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQR---------P 197 (403)
T ss_pred EEEEEeCCCCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------c
Confidence 88888888899999998864 78999999999999999999999999999999999999998764321 1
Q ss_pred CCCCccEEEecCcccccCC----ccEEee
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
+..++||++.|++|.+|+. ||++++
T Consensus 198 l~~g~Di~v~S~tK~l~g~gd~~gG~v~~ 226 (403)
T PRK07503 198 LELGADLVVHSATKYLGGHGDITAGLVVG 226 (403)
T ss_pred hhhCCCEEEccccccccCCCceeEEEEEc
Confidence 1235689999999999864 577765
No 108
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=5.4e-19 Score=175.37 Aligned_cols=154 Identities=15% Similarity=0.114 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||+++|++.|.+++++++||++|+..++.+++++ ||.|++....|.+....+.......|
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~--------------Gd~Vi~~~~~y~~t~~~~~~~l~~~G 128 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGA--------------GSHIVASSALYGGSHNLLHYTLRRFG 128 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEeCCccHHHHHHHHHHHhhCC
Confidence 4778999999999999999999999999999999888654 77788777777665444432112238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++.+|+++|+++|++ +|++|+++++.|++|.+.|+++|.++|+++|+++|+|.+|+.+.+. ..
T Consensus 129 i~v~~vd~~d~~~l~~~i~~---~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~---------~p 196 (433)
T PRK08134 129 IETTFVKPGDIDGWRAAIRP---NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL---------RP 196 (433)
T ss_pred eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC---------Cc
Confidence 89999988899999999875 7999999999999999999999999999999999999999987541 12
Q ss_pred CCCCccEEEecCcccccCCc
Q 019931 309 CERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~G 328 (334)
+..++|+++.|.+|.+|+.|
T Consensus 197 l~~GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 197 FEHGADLVYHSATKFLGGHG 216 (433)
T ss_pred hhcCCCEEEeccccccCCCC
Confidence 34568999999999998754
No 109
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=3e-19 Score=176.89 Aligned_cols=159 Identities=23% Similarity=0.247 Sum_probs=126.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++.|.+.+++++||++|+..++.+++++ ||.|++....+......+.......+
T Consensus 57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~--------------Gd~Vl~~~~~Y~~t~~~~~~~l~~~g 122 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEA--------------GDNIVSVAKLYGGTYNLLAHTLPRIG 122 (425)
T ss_pred CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCC--------------CCEEEEeCCCcchHHHHHHHhcccce
Confidence 3667899999999999999999999999999999988765 66666665544433333321111126
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|++||+|++|+.+.... .
T Consensus 123 i~v~~~d~~d~e~le~ai~~---~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~---------p 190 (425)
T PRK06084 123 IETRFAAHDDIAALEALIDE---RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR---------P 190 (425)
T ss_pred eEEEEECCCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---------h
Confidence 77777888899999999875 68999999999999999999999999999999999999999765321 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+|+ .||+|++
T Consensus 191 ~~~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 191 FEHGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred hhcCCCEEEECchhcccccccceeEEEEe
Confidence 233579999999999975 3677764
No 110
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=9.7e-19 Score=173.15 Aligned_cols=203 Identities=16% Similarity=0.169 Sum_probs=142.0
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~ 176 (334)
+|.+|++||||.+. ..||. +||+|.+|+.+. ...... ......++...+|.++|+++.+ .+++++++||++
T Consensus 35 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse 112 (421)
T PRK06777 35 WDVEGREYIDFAAGIAVLNTGH-RHPKVVAAVRQQLDQFTHT-AYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAE 112 (421)
T ss_pred EeCCCCEEEEcccCHHhhccCC-CCHHHHHHHHHHHhhcccc-cccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHH
Confidence 46778999999875 45777 489999877543 222211 1111234666889999999875 367888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----CC-----cEEEEeeCC----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----KM-----VEVFVYKHC---------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----~g-----~~v~~~~~~---------- 237 (334)
|+.++++.... .+++..+|.....+|+.....+.++... .+ ..+..++..
T Consensus 113 A~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 181 (421)
T PRK06777 113 AVENAVKIARA-----------YTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEE 181 (421)
T ss_pred HHHHHHHHHHH-----------hhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHH
Confidence 99999986433 2345667778888999876666543210 00 011111211
Q ss_pred CHHHHHHHHhc--CCCCcEEEEEcCCCCCCCC-ccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCC
Q 019931 238 DMSHLKTLLSC--CTMRKKVVVTDSLFSMDGD-FAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCE 310 (334)
Q Consensus 238 D~~~Le~~l~~--~~~~~~lVv~e~v~n~~G~-~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~ 310 (334)
+++++++++++ .+.+..+|++|+++++.|. +.| +++|+++|++||++||+||+|+ | +|++|.++ .+++++.
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g-~gr~g~~~~~~~~~~~ 259 (421)
T PRK06777 182 ALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-G-FARTGKLFAMEYYDVK 259 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CccCCchhhhhhcCCC
Confidence 26678888863 2346789999999999885 345 8999999999999999999999 5 78888765 3667776
Q ss_pred CCccEEEecCccccc
Q 019931 311 RDVDICVGTLSKAAG 325 (334)
Q Consensus 311 ~~~Div~~SlsKa~G 325 (334)
| ||+ ||||++|
T Consensus 260 p--Div--~~sK~l~ 270 (421)
T PRK06777 260 P--DLI--TMAKSLG 270 (421)
T ss_pred C--CEE--eeehhhc
Confidence 6 454 8999997
No 111
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=6.3e-19 Score=172.19 Aligned_cols=157 Identities=18% Similarity=0.131 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
+..++||+++++++|.+++++|+||++|+..++. ++++ ||.|++....|.+....+.......|+
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~--------------Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 111 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNN--------------GDEIIAGDDLYGGTDRLLTQVVPRSGV 111 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCC--------------CCEEEEcCCCchHHHHHHHHHHHHcCc
Confidence 5679999999999999999999999998877665 5543 777887777776655433321122388
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC 309 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~ 309 (334)
+++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.... .+
T Consensus 112 ~v~~vd~~d~~~le~~i~~---~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~---------~l 179 (378)
T TIGR01329 112 VVVHVDTTDLDKVKAALGP---KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCN---------PL 179 (378)
T ss_pred EEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC---------hh
Confidence 9999998899999998863 78999999999999999999999999999999999999997664311 12
Q ss_pred CCCccEEEecCcccccC----CccEEee
Q 019931 310 ERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
..++|++++|++|.+++ .||++++
T Consensus 180 ~~g~Di~v~S~tK~l~G~~~~~~G~v~~ 207 (378)
T TIGR01329 180 ELGADIVYHSATKFLAGHSDVMAGVLAV 207 (378)
T ss_pred hcCCcEEEEecceeccCCccceeEEEEe
Confidence 23579999999999965 2687765
No 112
>PRK05965 hypothetical protein; Provisional
Probab=99.82 E-value=6.5e-19 Score=176.14 Aligned_cols=211 Identities=16% Similarity=0.081 Sum_probs=143.9
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.++.+|++||||.+. ..||.+ ||+|.+|+++. ......+....-.++...+|.++|++... .+++++++||++
T Consensus 40 l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSE 118 (459)
T PRK05965 40 LTDASGHQLLDAFAGLWCVNVGYG-QESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSD 118 (459)
T ss_pred EEECCCCEEEECcccHHhccCCCC-CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhH
Confidence 356788999999774 356774 89999987654 22222222111235666889999999874 467788899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh-----cC-----CcEEEEeeC-------CCH
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER-----TK-----MVEVFVYKH-------CDM 239 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~-----~~-----g~~v~~~~~-------~D~ 239 (334)
|+.++++....... ..+ .+++..+|..+..+|+....++.++.. .. +...+.++. +|.
T Consensus 119 Ave~AlKlAr~~~~--~~g---~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 119 AVDSAVRFIRHYWN--ATG---RPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred HHHHHHHHHHHHHH--hcC---CCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 99999996432100 000 012355777888899986555444321 00 111121221 232
Q ss_pred --------HHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 240 --------SHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 240 --------~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
+++++++.+.. .+...|++|++.+..|.+.| |++|+++|++||++||+||+++. +|++|.++ .+
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG--fGRtG~~~a~~ 271 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITG--FGRTGPLFACE 271 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcc--CccCchhhhHh
Confidence 56788886433 46789999999998887655 89999999999999999999984 89999876 46
Q ss_pred ccCCCCCccEEEecCccccc
Q 019931 306 QFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G 325 (334)
++++.| ||+ +|+|++|
T Consensus 272 ~~gv~P--Div--~~gKgl~ 287 (459)
T PRK05965 272 AEGVVP--DLM--TVAKGLT 287 (459)
T ss_pred hcCCCC--CeE--Eechhhc
Confidence 889887 455 8999996
No 113
>PRK07482 hypothetical protein; Provisional
Probab=99.82 E-value=6.9e-19 Score=176.04 Aligned_cols=210 Identities=17% Similarity=0.099 Sum_probs=143.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
+|.+||+||||.+. ..||.+ ||+|.+|+++. ..+...+....-.++...+|.++|+++.+ .+++++++||++|
T Consensus 45 ~D~dG~~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEA 123 (461)
T PRK07482 45 TDAQGRRYIDAFAGLYCVNVGYG-RTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDA 123 (461)
T ss_pred EECCCCEEEEcccchhhhcCCCC-CHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHH
Confidence 56788999999885 457774 89999987653 33221111111235777899999999874 4678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC--C--------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH--C-------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~--~-------- 237 (334)
+.++++..... +.. +-.+++..+|.....+|+.......++... .+...+.++. +
T Consensus 124 ve~AlKlAr~~----~~~-~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 198 (461)
T PRK07482 124 NETQIKLVWYY----NNV-LGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE 198 (461)
T ss_pred HHHHHHHHHHH----HHh-cCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence 99999965421 000 001224556777888998765444333100 0111111121 1
Q ss_pred ------CHHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 238 ------DMSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 238 ------D~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
++++|++++.+. +.+...|++|++.+..|.+.| +++|+++|++||++||+||+++. +|++|.++ .+
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tG--fGRtG~~~a~~ 276 (461)
T PRK07482 199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTG--FGRLGSMFGSD 276 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccC--CCcCcchhhHH
Confidence 357788888532 346789999999988887755 89999999999999999999984 89999876 47
Q ss_pred ccCCCCCccEEEecCccccc
Q 019931 306 QFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G 325 (334)
++++.| ||+ +++|++|
T Consensus 277 ~~gv~P--Div--~~gKgl~ 292 (461)
T PRK07482 277 HYGIEP--DLI--TVAKGLT 292 (461)
T ss_pred hcCCCC--CEE--EEccccc
Confidence 889988 455 7999996
No 114
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=1.3e-18 Score=173.19 Aligned_cols=212 Identities=21% Similarity=0.228 Sum_probs=146.3
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~ 175 (334)
.++.+|++||||.++ ..||. +||+|.+|+.+. ..+...+.... .++...+|.++|++..+ .+.+++++||+
T Consensus 48 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGs 125 (441)
T PRK05769 48 VEDVDGNVYLDFNAGIAVTNVGH-AHPKVVKAVKEQAEKFLHYSLTDF-YYEPAVELAERLVEIAPGGFEKKVFFTNSGT 125 (441)
T ss_pred EEeCCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhccCccCccc-CCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 457888999999875 34666 489999877553 22221111111 24666889999999875 36788889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------CCcEEEEeeC--------C-
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------KMVEVFVYKH--------C- 237 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~g~~v~~~~~--------~- 237 (334)
+||.++++.... .+++..+|.....+|+.....+.++... ....+..++. +
T Consensus 126 EA~e~AlklAr~-----------~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (441)
T PRK05769 126 ESNEAAIKIARY-----------HTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGI 194 (441)
T ss_pred HHHHHHHHHHHH-----------HhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccC
Confidence 999999986443 1345667778888999876665543100 0011222222 1
Q ss_pred -C--------HHHHHH-HHhc--CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 238 -D--------MSHLKT-LLSC--CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 238 -D--------~~~Le~-~l~~--~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
| .+.+|+ ++++ .+.+..+|++|+++++.|.+.| |++|.++|++||+++|+||+|+ | +|++|.
T Consensus 195 ~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G-~gr~G~ 272 (441)
T PRK05769 195 ENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-G-MGRTGK 272 (441)
T ss_pred CchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccc
Confidence 1 234666 3332 2346789999999999999888 9999999999999999999999 5 889898
Q ss_pred cc-ccccCCCCCccEEEecCcccccC--CccEEee
Q 019931 302 GV-AEQFNCERDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 302 g~-~~~~~~~~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
++ .+++++.| |++ +|+|++|. ..|++++
T Consensus 273 ~~a~~~~gv~p--Div--t~~K~l~~G~p~gav~~ 303 (441)
T PRK05769 273 MFAIEHFGVEP--DII--TLAKAIAGGLPLGAVIG 303 (441)
T ss_pred eehhhccCCCC--CEE--EEcccccCCcccEEEEE
Confidence 76 46788876 565 79999974 1255554
No 115
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=1.6e-19 Score=180.30 Aligned_cols=185 Identities=17% Similarity=0.114 Sum_probs=131.3
Q ss_pred CHHHHHHH-----HHhcCCCCccccccCchHHHHHHH----HHHHhHhCCCc-EE-E---eccHHHHHHHHHHHHhhhhh
Q 019931 125 HPTIAKAA-----ARHGMGPRGSALICGYTNYHRLLE----SCLADLKKKED-CL-L---CPTGFAANMAVIVAVGNIAS 190 (334)
Q Consensus 125 ~p~v~~a~-----~~~g~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~-al-v---~~sG~~An~~ai~al~~~~~ 190 (334)
+|.+++++ .+|+.|.++++...|.... +++| +++++++|++. .+ + ++||++||..++.+++++
T Consensus 47 s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~-~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~-- 123 (452)
T PTZ00094 47 SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVV-DKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQP-- 123 (452)
T ss_pred CHHHHHHhcchhhccccCCCCCccccccchHH-HHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCC--
Confidence 45555532 4677788888888886444 6666 48899999753 22 2 268999999999998764
Q ss_pred hccCCCccCCCCCeEEEEcCCCchhhHHHHHH-hhh-----cCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEc
Q 019931 191 LLAGDEKSFKDEKIAIFSDALNHASIIDGIRI-AER-----TKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 191 ~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l-s~~-----~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e 259 (334)
||.|+++...|++....... ... ....++..|+++ |+++|++++++. ++++|++.
T Consensus 124 ------------gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~ 189 (452)
T PTZ00094 124 ------------HDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG 189 (452)
T ss_pred ------------CCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe
Confidence 78999999999885543321 100 001334455554 999999999753 34555542
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEee
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIAC 333 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~ 333 (334)
.+..|...|+++|.++|+++|+++++|++|++|.++..+.. .++ .++|++++|++|+| |+.||++.+
T Consensus 190 --~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~----~~~-~~~D~l~~S~hK~l~GP~Gg~l~~ 257 (452)
T PTZ00094 190 --ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP----SPF-PYADVVTTTTHKSLRGPRSGLIFY 257 (452)
T ss_pred --CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC----CCC-CCCcEEEcCCccCCCCCCceEEEE
Confidence 23467799999999999999999999999999987532211 112 36899999999988 788888875
No 116
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=8.4e-19 Score=174.69 Aligned_cols=202 Identities=14% Similarity=0.161 Sum_probs=140.7
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~ 175 (334)
.+|.+|++||||.+. ..||. +||+|.+|+.+.. ... ........++...+|.++|+++.+. +++++++||+
T Consensus 50 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~-~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 50 VEDVDGNRLIDLGSGIAVTSVGN-SAPRVVEAVREQVARFT-HTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred EEeCCCCEEEEcCcchhhhccCC-CCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 457889999999874 45777 5899999776542 221 1122223457778999999998752 5688889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----cCC-----cEEEE----eeCCCH---
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----TKM-----VEVFV----YKHCDM--- 239 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~~g-----~~v~~----~~~~D~--- 239 (334)
+|+.++++.... .+++..+|..+..+|+.....+.++.. ..+ ..+.. ++.++.
T Consensus 128 eA~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (443)
T PRK06058 128 EAVENAVKIARS-----------YTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGL 196 (443)
T ss_pred HHHHHHHHHHHH-----------hhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccccccc
Confidence 999999985432 234566777888899987766654421 000 01111 222221
Q ss_pred ------------HHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc
Q 019931 240 ------------SHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 240 ------------~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
+.+++.+. ..+.++|++|++.+..|.+.| |++|+++|++||++||+||+++ | +|++|.++
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-G-fgRtG~~f 272 (443)
T PRK06058 197 ATDGEEAAARAITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-G-FARTGAWF 272 (443)
T ss_pred ccchHHHHHHHHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcChhhh
Confidence 12223222 236789999999998887765 9999999999999999999998 5 78888765
Q ss_pred -ccccCCCCCccEEEecCccccc
Q 019931 304 -AEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 304 -~~~~~~~~~~Div~~SlsKa~G 325 (334)
.+++++.| ||+ +++|++|
T Consensus 273 a~~~~gv~P--Div--~~gK~l~ 291 (443)
T PRK06058 273 ACEHEGIVP--DLI--TTAKGIA 291 (443)
T ss_pred HHHhcCCCC--CEE--EEccccc
Confidence 46788887 555 7899997
No 117
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=7.3e-19 Score=170.98 Aligned_cols=158 Identities=16% Similarity=0.206 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+.+||++|+++.|.+.+++++||++|+..++ +++.+ ||.|++....+......+.......|
T Consensus 51 ~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~--------------Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRS--------------GDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCC--------------CCEEEEecCCcCcHHHHHHHHhhccC
Confidence 4778999999999999999999999999998766 45543 66666665555543332221111238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++++|+||.|.+.++++|.++|+++|+++|+|++|+.+++.. +
T Consensus 116 ~~v~~vd~~d~~~l~~~i~~---~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---------p 183 (366)
T PRK08247 116 VRFVYVNTASLKAIEQAITP---NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---------P 183 (366)
T ss_pred ceEEEECCCCHHHHHHhccc---CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------c
Confidence 89999998899999998864 78999999999999999999999999999999999999997665422 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||+++|+||.+++ .||++++
T Consensus 184 ~~~g~di~i~S~sK~~~g~~d~~~G~iv~ 212 (366)
T PRK08247 184 LEEGADIVIHSATKYLGGHNDVLAGLVVA 212 (366)
T ss_pred hhcCCcEEEeecceeccCCCceeeeEEec
Confidence 223578999999999986 4677765
No 118
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.81 E-value=1.5e-18 Score=171.81 Aligned_cols=204 Identities=12% Similarity=0.119 Sum_probs=143.4
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~ 176 (334)
+|.+|++||||.+. ..||. +||+|.+|+++. ....... .....++...+|.++|+++.+ .+++++++||++
T Consensus 35 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse 112 (421)
T PRK09792 35 KDVEGNEYIDFAAGIAVLNTGH-RHPDLVAAVEQQLQQFTHTA-YQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAE 112 (421)
T ss_pred EeCCCCEEEEccCchhhhcCCC-CCHHHHHHHHHHHHhccCcc-cCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHH
Confidence 46778999999774 45777 499999977543 3222111 111235666889999999864 257888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----cC-------CcEEEEeeC--------C
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----TK-------MVEVFVYKH--------C 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~~-------g~~v~~~~~--------~ 237 (334)
|+..+++.... .+++..+|.....+|+.....+.++.. .. +...+.++. +
T Consensus 113 A~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~ 181 (421)
T PRK09792 113 AVENAVKIARA-----------HTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQD 181 (421)
T ss_pred HHHHHHHHHHH-----------hcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHH
Confidence 99999996543 234556777888899987666554321 00 111122221 2
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCcc-C---HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCC
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDFA-P---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCE 310 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~-p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~ 310 (334)
+++.+++++++. ..+.++|++|++++++|... | +++|+++|++||++||+||+++. +|++|.+++ +++++.
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~G~~~a~~~~~~~ 259 (421)
T PRK09792 182 SLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG--FARTGKLFAMDHYADK 259 (421)
T ss_pred HHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCCchhHHHhcCCC
Confidence 457888888641 24678999999999999654 5 89999999999999999999994 788887654 567766
Q ss_pred CCccEEEecCcccccC
Q 019931 311 RDVDICVGTLSKAAGC 326 (334)
Q Consensus 311 ~~~Div~~SlsKa~G~ 326 (334)
| | +.||||++|.
T Consensus 260 p--D--i~t~gK~l~~ 271 (421)
T PRK09792 260 P--D--LMTMAKSLAG 271 (421)
T ss_pred C--c--EEEeehhhcC
Confidence 6 4 4599999974
No 119
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.81 E-value=4.8e-20 Score=179.46 Aligned_cols=177 Identities=21% Similarity=0.228 Sum_probs=114.2
Q ss_pred HHhcCCCCccccccCchHHHHHHHH----HHHhHhCCC----cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCC
Q 019931 133 ARHGMGPRGSALICGYTNYHRLLES----CLADLKKKE----DCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEK 203 (334)
Q Consensus 133 ~~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e----~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~g 203 (334)
.+|..|..+.|++.|+ ...+++|+ ++.++|+++ .+-+- .||+.||++++.+|++| |
T Consensus 46 nkyaeg~pg~ryy~G~-~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~p--------------G 110 (399)
T PF00464_consen 46 NKYAEGYPGKRYYGGC-EYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKP--------------G 110 (399)
T ss_dssp GS-TTEETTEESSSST-HHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-T--------------T
T ss_pred eeccccCCCcccccCc-chhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhh--------------c
Confidence 4577777777888776 44455544 555689999 88777 79999999999999986 7
Q ss_pred eEEEEcCCCchh-hHHHHHHhh-----hcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEE-EcCCCCCCCCccC
Q 019931 204 IAIFSDALNHAS-IIDGIRIAE-----RTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVV-TDSLFSMDGDFAP 270 (334)
Q Consensus 204 d~Vl~d~~~H~s-~~~g~~ls~-----~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv-~e~v~n~~G~~~p 270 (334)
|.|+.-.+.|+. +.++..... .....+++.|+.+ |++.+++++++. ++++|+ -.+.|.. ..|
T Consensus 111 D~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~--kPklIi~G~S~y~~---~~d 185 (399)
T PF00464_consen 111 DTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEH--KPKLIICGASSYPR---PID 185 (399)
T ss_dssp -EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE-SSTSS------
T ss_pred CcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhc--CCCEEEECchhccC---ccC
Confidence 888876654432 112221111 0113456666643 999999999875 456655 4455544 678
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+++++++|++.|++|++|.+|..|++- .|. +.++.+.+||+++|++|+| |+.||+|+++
T Consensus 186 ~~~~reIad~vga~l~~D~sH~~GLIa---~g~--~~~P~~~ADvvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 186 FKRFREIADEVGAYLMADISHIAGLIA---GGL--FPNPFPYADVVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp HHHHHHHHHHTT-EEEEE-TTTHHHHH---TTS--S--GCCTSSEEEEESSGGG-SSS-EEEEES
T ss_pred HHHHHHHHHhcCcEEEeccccccccee---hhe--ecCccccceEEEeeccccccccCceEEEEc
Confidence 999999999999999999999999873 233 2344467999999999999 8899999874
No 120
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=7.6e-19 Score=174.27 Aligned_cols=159 Identities=17% Similarity=0.177 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+....||++|+++.|.+.+++++||+.|+..++.+++++ ||.|++....|......+.......|
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~--------------GD~Vlv~~~~y~~t~~~~~~~~~~~G 128 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASA--------------GDEIVSSSSLYGGTYNLFAHTLPKLG 128 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEccCchhhHHHHHHHHHHhCC
Confidence 4667899999999999999999999999999999888764 77777777666554443322112238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|+++++.||+|.+.|+++|.++|+++|+++|+|++++.+... .+
T Consensus 129 v~v~~vd~~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~---------~p 196 (431)
T PRK08248 129 ITVKFVDPSDPENFEAAITD---KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL---------RP 196 (431)
T ss_pred EEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC---------Ch
Confidence 89999998899999998864 6899999999999999999999999999999999999998754321 12
Q ss_pred CCCCccEEEecCcccccCC----ccEEee
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
+..++||++.|++|.+|+. ||+|+.
T Consensus 197 l~~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 197 IEHGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred hHcCCCEEEEcCccccCCCCCceEEEEEe
Confidence 3456899999999999864 566653
No 121
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=9.2e-19 Score=171.92 Aligned_cols=159 Identities=18% Similarity=0.117 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++++++.|.+++++++||++|+..++.+++++ ||.|++....|......+.......|
T Consensus 64 ~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~--------------GD~Vl~~~~~y~~~~~~~~~~~~~~G 129 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKA--------------GDDVLIPDNAYGPNRDHGEWLARDFG 129 (394)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCC--------------CCEEEEecCCcccHHHHHHHHHHhcC
Confidence 4667999999999999999999999999999999998764 78888888777765543321112237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
+++..++..+.+++++++++ ++++|+++++.|+.|.+.|+++|.++|+++|+++++|++|+.+++- .+
T Consensus 130 i~v~~vd~~~~~~l~~~i~~---~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~---------~~ 197 (394)
T PRK07050 130 ITVRFYDPLIGAGIADLIQP---NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF---------KP 197 (394)
T ss_pred eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc---------CH
Confidence 88888887777888888864 7899999999999999999999999999999999999999987541 12
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+++ .||++++
T Consensus 198 l~~GaDi~v~S~tK~~~g~~~~~gG~v~~ 226 (394)
T PRK07050 198 FEHGVDISVQALTKYQSGGSDVLMGATIT 226 (394)
T ss_pred HHcCCeEEEEECCceecCCCCeeEEEEEE
Confidence 334579999999999965 3566554
No 122
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.81 E-value=1.5e-18 Score=169.57 Aligned_cols=159 Identities=25% Similarity=0.209 Sum_probs=122.3
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.|....||++|+++.|.+.+++|+||+.|+.+++.+++++ ||.|+.....+.....-+.......+
T Consensus 54 nPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~--------------Gd~iv~~~~~Y~~t~~~~~~~l~~~g 119 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKP--------------GDHIVASDDLYGGTYRLLEELLPRFG 119 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-T--------------TBEEEEESSSSHHHHHHHHHCHHHTT
T ss_pred cccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhccc--------------CCceEecCCccCcchhhhhhhhcccC
Confidence 5888999999999999999999999999999999998875 55555444434444444442223348
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC-CEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG-FLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g-a~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
.++..++..|+++|++++++ ++++|++|++.||...+.|+++|+++|+++| ++++||+..+.+++ ..
T Consensus 120 v~v~~~d~~d~~~l~~~l~~---~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~---------~~ 187 (386)
T PF01053_consen 120 VEVTFVDPTDLEALEAALRP---NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN---------QN 187 (386)
T ss_dssp SEEEEESTTSHHHHHHHHCT---TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT---------C-
T ss_pred cEEEEeCchhHHHHHhhccc---cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee---------ec
Confidence 99999999999999999986 8999999999999999999999999999999 99999999887643 12
Q ss_pred CCCCCccEEEecCcccccC----CccEEee
Q 019931 308 NCERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
++..++||++.|++|.+++ .||+|++
T Consensus 188 pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~ 217 (386)
T PF01053_consen 188 PLELGADIVVHSATKYLSGHSDVMGGAVVV 217 (386)
T ss_dssp GGGGT-SEEEEETTTTTTTSSSE-EEEEEE
T ss_pred cCcCCceEEEeeccccccCCcceeeEEEEE
Confidence 3445689999999999986 3577764
No 123
>PLN02509 cystathionine beta-lyase
Probab=99.81 E-value=8.3e-19 Score=175.00 Aligned_cols=157 Identities=18% Similarity=0.141 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
+.+++||++++++.+.+.+++|+||++|+..++ .++++ ||.|++....|......+.......|+
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~ll~~--------------GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKN--------------GEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HHhCC--------------CCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 678999999999999999999999998875544 45553 788888887777654333211112288
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC 309 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~ 309 (334)
+++.++..|++++++++++ ++++|++++++||+|.+.|+++|+++|++||++||+|++|+.++++. .+
T Consensus 198 ~v~~vd~~d~e~l~~ai~~---~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---------pl 265 (464)
T PLN02509 198 VVKRVNTTNLDEVAAAIGP---QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---------PL 265 (464)
T ss_pred EEEEeCCCCHHHHHHhCCc---CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC---------hh
Confidence 8888998999999988864 78999999999999999999999999999999999999998876532 12
Q ss_pred CCCccEEEecCcccccC----CccEEee
Q 019931 310 ERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
..++||++.|++|.+++ .||++++
T Consensus 266 ~~gaDivv~S~tK~l~G~gdv~gG~v~~ 293 (464)
T PLN02509 266 ELGADIVMHSATKFIAGHSDVMAGVLAV 293 (464)
T ss_pred hcCCcEEEecCcccccCCCccceeEEEe
Confidence 23579999999999976 3677764
No 124
>PRK06460 hypothetical protein; Provisional
Probab=99.81 E-value=1e-18 Score=170.62 Aligned_cols=156 Identities=19% Similarity=0.111 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCch-h---hHHHHHHhh
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA-S---IIDGIRIAE 224 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~-s---~~~g~~ls~ 224 (334)
.+.+++||++++++.|.+.++++++|++|+..++.+++++ ||.|++....+. + +...++..
T Consensus 44 ~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~--------------Gd~Vl~~~~~~~~ty~~~~~~~~~~- 108 (376)
T PRK06460 44 NPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKP--------------GNSVLVHRDMFGRSYRFFTDYLKNW- 108 (376)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEecCCcCcHHHHHHHHHHhh-
Confidence 5778999999999999999999999999999999888765 677776544332 2 22233333
Q ss_pred hcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc
Q 019931 225 RTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA 304 (334)
Q Consensus 225 ~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~ 304 (334)
|.++..++.++.+.++++++ +++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.++..
T Consensus 109 ---G~~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~------- 175 (376)
T PRK06460 109 ---GVNVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ------- 175 (376)
T ss_pred ---CcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-------
Confidence 78888888877666666543 37899999999999999999999999999999999999999764211
Q ss_pred cccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 305 EQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
..+..++||++.|+||+|++ .+|+++++
T Consensus 176 --~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~ 207 (376)
T PRK06460 176 --KPLELGADIVVHSASKFLAGHNDVIAGLAAGY 207 (376)
T ss_pred --ChhhcCCCEEEeecceeccCCCCceEEEEecC
Confidence 11223468999999999975 36888764
No 125
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.81 E-value=5.2e-19 Score=175.35 Aligned_cols=212 Identities=16% Similarity=0.107 Sum_probs=143.1
Q ss_pred hcccceeEEEeecCc---cCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGND---YLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
++.+|++||||+++. +||. +||+|++++.+.-. ...... ..-+++...++.++|+++.+. +.+++++||++|
T Consensus 40 ~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA 117 (427)
T TIGR00508 40 TLDDGRRLIDGMSSWWAAIHGY-NHPRLNAAAQKQIDKMSHVMF-GGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVA 117 (427)
T ss_pred EeCCCCEEEEccchHHHhcCCC-CCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHH
Confidence 456789999999875 8995 68999997765322 111111 011245668899999998753 578888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----------CCcEEEEe---------eCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----------KMVEVFVY---------KHC 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----------~g~~v~~~---------~~~ 237 (334)
+..+++....... .++ .+++..+|.....+|+.......++... .+.....+ +++
T Consensus 118 ~e~AlklAr~~~~--~~~---~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 192 (427)
T TIGR00508 118 VEVALKMALQYWQ--AKG---EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEE 192 (427)
T ss_pred HHHHHHHHHHHHH--hhC---CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHH
Confidence 9999996543200 000 0124567888889998765444433110 00001111 223
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCC-C----ccCHHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDG-D----FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCER 311 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G-~----~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~ 311 (334)
|++++++++.+...+..+|++|+++.+.| . ..+|++|+++|++||++||+||+| +| +|++|+++ .+++++.|
T Consensus 193 ~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG-~Gr~G~~~~~~~~~v~p 270 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TG-FGRTGKLFACEHAGVVP 270 (427)
T ss_pred HHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-CCcCCccchhhhcCCCC
Confidence 67888888875444678999999866655 3 244999999999999999999999 57 69999885 46788876
Q ss_pred CccEEEecCcccccCCccE
Q 019931 312 DVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 312 ~~Div~~SlsKa~G~~GG~ 330 (334)
||+ +++|+++ ||+
T Consensus 271 --Di~--~~gK~l~--gG~ 283 (427)
T TIGR00508 271 --DIL--CVGKALT--GGY 283 (427)
T ss_pred --CEE--Eechhhh--cCc
Confidence 566 5899995 454
No 126
>PRK05968 hypothetical protein; Provisional
Probab=99.81 E-value=1.4e-18 Score=170.45 Aligned_cols=160 Identities=19% Similarity=0.153 Sum_probs=128.1
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
..+.+++||+++++++|.+.+++++||++|+..++.+++++ ||.|++....|......+.......
T Consensus 61 ~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~--------------Gd~Vl~~~~~y~~t~~~~~~~~~~~ 126 (389)
T PRK05968 61 DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEP--------------GDRIVAVRHVYPDAFRLFETILKRM 126 (389)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEeCCCchHHHHHHHHHHHHc
Confidence 35778999999999999999999999999999999887764 7777777666665443332111122
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
|+++..++..|++++++++. ++++|++|++.|+.+.+.|+++|.++|+++|+++|+|++|+.+++..
T Consensus 127 G~~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--------- 193 (389)
T PRK05968 127 GVEVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR--------- 193 (389)
T ss_pred CceEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---------
Confidence 88888888889999998872 57899999999999999999999999999999999999998775421
Q ss_pred CCCCCccEEEecCcccccC----CccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
++..++|+++.|++|.+++ .||+++++
T Consensus 194 p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~ 224 (389)
T PRK05968 194 PITLGVDLVIHSASKYLGGHSDTVAGVVAGS 224 (389)
T ss_pred chhcCCcEEEeeccccccCCCCeEEEEEEEC
Confidence 1223568999999999986 36888753
No 127
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=1.1e-18 Score=174.27 Aligned_cols=209 Identities=17% Similarity=0.189 Sum_probs=144.4
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
+|.+|++||||.+. ..||. +||+|.+|+.+. ......+.... .++...+|.++|++..+. +++++++||++|
T Consensus 49 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseA 126 (453)
T PRK06943 49 YDRDGRRYLDAISSWWVNLFGH-ANPRINAALKDQLDTLEHAMLAGC-THEPAIELAERLAALTGGTLGHAFFASDGASA 126 (453)
T ss_pred EeCCCCEEEEcchHHHHhcCCC-CCHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHH
Confidence 56888999999875 34677 589999977653 22221111111 246668899999998864 478888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH----------- 236 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~----------- 236 (334)
+.++++....... .. -.+++..+|.....+|+.....+.++... .+...+.++.
T Consensus 127 ve~AlKlA~~~~~--~r---g~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (453)
T PRK06943 127 VEIALKMSFHAWR--NR---GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAA 201 (453)
T ss_pred HHHHHHHHHHHHH--Hh---CCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHH
Confidence 9999997533100 00 01234567778888999876555444210 0111122221
Q ss_pred ----CCHHHHHHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cc
Q 019931 237 ----CDMSHLKTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQ 306 (334)
Q Consensus 237 ----~D~~~Le~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~ 306 (334)
++++++++++.+...+...|++|+ +.+..|.+.| |++|+++|++||++||+||+++. +|++|.+++ ++
T Consensus 202 ~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG--~GRtG~~fa~~~ 279 (453)
T PRK06943 202 DVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVG--CGRTGTFFACEQ 279 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhC--CCCCcchhHHHh
Confidence 135778888865445788999999 4888787654 89999999999999999999984 799998775 68
Q ss_pred cCCCCCccEEEecCccccc
Q 019931 307 FNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G 325 (334)
+++.| ||+ +|+|++|
T Consensus 280 ~gv~P--Div--t~gKgl~ 294 (453)
T PRK06943 280 AGVWP--DFL--CLSKGIS 294 (453)
T ss_pred CCCCC--CeE--eeehhhc
Confidence 89887 455 8999997
No 128
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.80 E-value=1.2e-18 Score=167.79 Aligned_cols=210 Identities=20% Similarity=0.248 Sum_probs=144.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHh--CCCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLK--KKEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~--g~e~alv~~sG~~A 177 (334)
++.+|++|+||++. .-||. +||+|.+++++. ..+...+. ....++...+|.++|.+.. +.+++++++||++|
T Consensus 11 ~d~dG~~~lD~~~~~~~~~lGh-~~p~i~~ai~~~~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseA 88 (339)
T PF00202_consen 11 WDVDGREYLDFMSGYGSVNLGH-NHPEIAEAIAEQANKLNYVSF-SGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEA 88 (339)
T ss_dssp EETTSEEEEESSHHHHTTTT-B-T-HHHHHHHHHHHHHCSSCST-TTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHH
T ss_pred EECCCCEEEECCCCccceecCC-CccccchhHHHHhhhcccccc-cceeccchhhhhhhhhhccccccceeeeccCchHH
Confidence 46788999999774 45676 489999987653 22222211 1223577799999999999 45678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh--------cCCcEEEEeeCCCHHH--------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER--------TKMVEVFVYKHCDMSH-------- 241 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~--------~~g~~v~~~~~~D~~~-------- 241 (334)
+..+++....... ....+++..+|.....+|+.....+.++.. .....+..++.++...
T Consensus 89 ve~Alkla~~~~~-----~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 163 (339)
T PF00202_consen 89 VEAALKLARQYHN-----KRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACL 163 (339)
T ss_dssp HHHHHHHHHHHHH-----HTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHH
T ss_pred HHHHHHHhhcccc-----cccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHH
Confidence 9999997661000 000123566777888999887666554321 0112346677777666
Q ss_pred --HHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCc
Q 019931 242 --LKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDV 313 (334)
Q Consensus 242 --Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~ 313 (334)
+++++.+. .++...|++|++.+..|...| +++|+++|++||++||+||+++. +|++|..+ .+++++.|
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG--~gRtG~~~a~~~~gv~P-- 239 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTG--FGRTGKFFASEHYGVDP-- 239 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTT--TTTTSSSSGHHHHTSSS--
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceeccccccc--ccccCCccceecccccC--
Confidence 44433322 246789999999998886654 89999999999999999999994 78999876 47889888
Q ss_pred cEEEecCcccccC
Q 019931 314 DICVGTLSKAAGC 326 (334)
Q Consensus 314 Div~~SlsKa~G~ 326 (334)
||+ +++|+++.
T Consensus 240 Div--~~gK~l~g 250 (339)
T PF00202_consen 240 DIV--TFGKGLGG 250 (339)
T ss_dssp SEE--EEEGGGGT
T ss_pred ccc--ccccchhh
Confidence 565 78999964
No 129
>PRK07046 aminotransferase; Validated
Probab=99.80 E-value=2.7e-18 Score=171.35 Aligned_cols=198 Identities=19% Similarity=0.141 Sum_probs=144.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
+|.+|++||||.++ ..||. +||+|.+|+++. ..+.. ....++...+|.++|++..+.+.+.+++||++|++
T Consensus 70 ~D~DG~~yiD~~~g~g~~~lGh-~~p~i~~Av~~q~~~~~~----~~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e 144 (453)
T PRK07046 70 TDVDGHRYDDFCLGDTGAMFGH-SPAPVARALAEQARRGLT----TMLPSEDAAWVGEELARRFGLPYWQVATTATDANR 144 (453)
T ss_pred EeCCCCEEEEecccccccccCC-CCHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHH
Confidence 57888999999765 34666 589999987653 33322 12235777889999999988888999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH--hh-----hcC-------CcEEEEeeCCCHHHHHHH
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI--AE-----RTK-------MVEVFVYKHCDMSHLKTL 245 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l--s~-----~~~-------g~~v~~~~~~D~~~Le~~ 245 (334)
.+++.... .+++..+|.....+|+..-..+.. .. ... ...+..+++||++.++++
T Consensus 145 ~AlrlAR~-----------~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~ 213 (453)
T PRK07046 145 FVLRWARA-----------VTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAA 213 (453)
T ss_pred HHHHHHHH-----------hhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHH
Confidence 99996433 244566777788899863211111 00 000 113456778999999999
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls 321 (334)
+.. .+...|++|++.+..|.+.| |++|+++|++||++||+||+++++ +|.. |..+++++.| ||+ ||+
T Consensus 214 l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr-~g~G--g~~~~~gv~P--Di~--t~g 284 (453)
T PRK07046 214 LAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTIS-SGPG--GYTRAHGLEP--DFL--VVG 284 (453)
T ss_pred hCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCc-cCCc--chhHHhCCCc--cce--eeh
Confidence 953 46889999999999898877 899999999999999999999843 3432 3456789887 555 799
Q ss_pred ccccC
Q 019931 322 KAAGC 326 (334)
Q Consensus 322 Ka~G~ 326 (334)
|++|.
T Consensus 285 K~lgg 289 (453)
T PRK07046 285 KPIAG 289 (453)
T ss_pred hhhcC
Confidence 99973
No 130
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.80 E-value=3.1e-18 Score=168.89 Aligned_cols=208 Identities=21% Similarity=0.219 Sum_probs=141.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An 178 (334)
+|.+|++||||.+. ..||. +||+|.+|+.+. ......+... .++...+|.++|+++.+ .+++++++||++||
T Consensus 35 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~ 111 (408)
T PRK04612 35 WDDQGREYLDLAAGIAVCGLGH-NDPDLVAALTEQAGKLWHTSNVF--YSAPPLKLAEELVTASRFAEKVFLCNSGTEAN 111 (408)
T ss_pred EECCCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHhhCCCCCEEEEcCchHHHH
Confidence 56888999999775 34677 499999977543 3222222222 24666789999998774 46788889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---C-----CcEEEEeeCCCHHHHHHHHhcCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---K-----MVEVFVYKHCDMSHLKTLLSCCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~-----g~~v~~~~~~D~~~Le~~l~~~~ 250 (334)
..+++....-.. ..+. ..++..+|.....+|+.....+.++... . ...+..++.+|++.++++++.
T Consensus 112 e~AlklAr~~~~--~~g~--~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 185 (408)
T PRK04612 112 EAAIKLVRKWAS--SQGR--PADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG-- 185 (408)
T ss_pred HHHHHHHHHHHH--hhCC--CCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC--
Confidence 999986443100 0000 0012356667888999876665543210 0 112345567899999998853
Q ss_pred CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
.+..+|++|++++..|.+.| +++|+++|++||++||+||+|+ | +|++|..+. .++++.| | +.||||++|
T Consensus 186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g-~gr~G~~~a~~~~~~~p--d--i~t~~K~l~ 259 (408)
T PRK04612 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-G-MGRTGTLFAHWQEQVTP--D--IVTLAKALG 259 (408)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCCchhhhhhcCCCC--C--EEEEcchhc
Confidence 36789999999887676553 8999999999999999999998 4 788886543 2334433 3 559999998
Q ss_pred C
Q 019931 326 C 326 (334)
Q Consensus 326 ~ 326 (334)
+
T Consensus 260 ~ 260 (408)
T PRK04612 260 G 260 (408)
T ss_pred C
Confidence 3
No 131
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=2e-18 Score=172.78 Aligned_cols=205 Identities=18% Similarity=0.146 Sum_probs=144.1
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC-----CcEEEe-c
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK-----EDCLLC-P 172 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~-~ 172 (334)
.+|.+|++||||.++ ..+|. +||+|.+|+++.- .+...... .-.++...+|.++|++.... +.++++ +
T Consensus 57 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 57 VEDVEGRQFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred EEeCCCCEEEEccCCccccccCC-CCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 357888999999775 34666 5899999886543 22211111 11257778888999887652 246666 7
Q ss_pred cHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeCC-----
Q 019931 173 TGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKHC----- 237 (334)
Q Consensus 173 sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~~----- 237 (334)
||++|+.++++.... .+++..+|.....+|+.....+.++... .+...++++.+
T Consensus 135 SGSEAve~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 203 (464)
T PRK06938 135 TGTDAVEAALKLVKT-----------ATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPF 203 (464)
T ss_pred CcHHHHHHHHHHHHH-----------hhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccc
Confidence 999999999996443 2345677778888999876666554210 01122223322
Q ss_pred ----------CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 238 ----------DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 238 ----------D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
+.+.+++++++.. .+...|++|++....|.+.| |++|+++|++||++||+||+++ | +|++|
T Consensus 204 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-G-fGRtG 281 (464)
T PRK06938 204 GLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-G-FGRTG 281 (464)
T ss_pred cCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCc
Confidence 2567888886432 25789999999988887665 8999999999999999999998 4 79999
Q ss_pred ccc-ccccCCCCCccEEEecCcccccC
Q 019931 301 GGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 301 ~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
.++ .+++++.| ||+ +|+|++|.
T Consensus 282 ~~~a~e~~gv~P--Div--~~gKglgg 304 (464)
T PRK06938 282 KMFAFEHAGIIP--DVV--VLSKAIGG 304 (464)
T ss_pred HHHHHHhcCCCC--CEE--EeeccccC
Confidence 876 47899988 455 89999973
No 132
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.80 E-value=9.4e-19 Score=174.64 Aligned_cols=215 Identities=14% Similarity=0.114 Sum_probs=143.2
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh--cCCC-CccccccCchHHHHHHHHHHHh----HhC--CCcEEEe
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH--GMGP-RGSALICGYTNYHRLLESCLAD----LKK--KEDCLLC 171 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~--g~g~-~~sr~~~G~~~~~~~LE~~La~----~~g--~e~alv~ 171 (334)
+|.+|++||||++. ..+|. +||+|.+|+++. .... ..+. . .++...+|.++|++ +.. .++++++
T Consensus 53 ~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~q~~~~~l~~~~~--~-~~~~~~~la~~l~~~l~~~~p~~~~~v~f~ 128 (464)
T TIGR00699 53 VDVDGNRLLDLYSQISSIPIGY-NNPALLKAAQSPEMATTLINRPA--L-GNFPSKDWAKILKEGILKVAPKGQDQVWTG 128 (464)
T ss_pred EeCCCCEEEEccCCHhhhcCCC-CCHHHHHHHHHHHHHHhhccccc--C-CcHHHHHHHHHHHHhHHhhCCCCcCEEEEe
Confidence 56888999999884 45676 599999988652 2211 1111 1 23455667777654 443 3678888
Q ss_pred ccHHHHHHHHHHHHhhhhhhccCC--------------CccCCCC--CeEEEEcCCCchhhHHHHHHhhhc----CCc--
Q 019931 172 PTGFAANMAVIVAVGNIASLLAGD--------------EKSFKDE--KIAIFSDALNHASIIDGIRIAERT----KMV-- 229 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~~~~~~--------------~~~~~~~--gd~Vl~d~~~H~s~~~g~~ls~~~----~g~-- 229 (334)
+||++||+++++...........+ +...+++ ..+|.....+|+.....+.++... .+.
T Consensus 129 ~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~ 208 (464)
T TIGR00699 129 MSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPA 208 (464)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCC
Confidence 999999999999653210000000 0001222 267778889999887766654211 000
Q ss_pred -EEE--EeeC-----------------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEE
Q 019931 230 -EVF--VYKH-----------------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLL 285 (334)
Q Consensus 230 -~v~--~~~~-----------------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~L 285 (334)
.+. .++. ++++.|++++.+...+..+|++|+++++.|.+.| |++|+++|++||++|
T Consensus 209 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lL 288 (464)
T TIGR00699 209 FDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAF 288 (464)
T ss_pred CCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 001 1110 2456788888754456889999999999999887 999999999999999
Q ss_pred EEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 286 VLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 286 ivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
|+||+|+ | +|++|.++ .+++++....||+ ||+|++|.
T Consensus 289 I~DEV~t-G-fGrtG~~fa~e~~gv~~~PDi~--t~gK~lg~ 326 (464)
T TIGR00699 289 IVDEVQT-G-VGATGKFWAHEHWNLDDPPDMV--TFSKKFQT 326 (464)
T ss_pred EEeeeee-C-CCCCcchhHHHhcCCCCCCCEE--Eehhhhcc
Confidence 9999995 6 69989875 4788987334664 89999964
No 133
>PLN02721 threonine aldolase
Probab=99.80 E-value=1.1e-18 Score=167.29 Aligned_cols=199 Identities=17% Similarity=0.203 Sum_probs=142.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~ 188 (334)
.++++|++|... . .+|.+++++.+...+.. ..++.+...+||++++++++.+.++++++|++++..++.+++..
T Consensus 5 ~~~~~~~~~~~~-~-~~~~~~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~ 78 (353)
T PLN02721 5 SRVVDLRSDTVT-K-PTDAMRAAMANAEVDDD----VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDV 78 (353)
T ss_pred hhhhhhhccccc-C-CCHHHHHHHHhccCCCc----ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccC
Confidence 457799998755 3 57888888865322211 22345667999999999999998999999999998888876641
Q ss_pred hhhccCCCccCCCCCeEEEEcCCCchhhHHH---HHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCC----CCcEEE
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDALNHASIIDG---IRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCT----MRKKVV 256 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g---~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~----~~~~lV 256 (334)
+||.|++..+.|.++... .... |++++.++. .|++++++++++.. +++++|
T Consensus 79 -------------~gd~Vl~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 79 -------------RGSEVILGDNSHIHLYENGGISTLG----GVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred -------------CCCeEEEcCccceehhcccchhhhc----CceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 378889888888776652 2222 777877764 38899999987421 267888
Q ss_pred EEcCCC-CCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEE
Q 019931 257 VTDSLF-SMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFI 331 (334)
Q Consensus 257 v~e~v~-n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i 331 (334)
++++++ |++|.+.| +++|.++|++||++||+|++|.++.....+... .....++|+++.|+||+|++ .|+++
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~---~~~~~~~d~~~~s~sK~l~~~~G~~~ 218 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV---HRLVKAADSVSVCLSKGLGAPVGSVI 218 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH---HHHhhhCCEEEEecccccCCceeeEE
Confidence 887765 56787766 789999999999999999999765321111111 11123578888899999987 45555
Q ss_pred ee
Q 019931 332 AC 333 (334)
Q Consensus 332 ~~ 333 (334)
++
T Consensus 219 ~~ 220 (353)
T PLN02721 219 VG 220 (353)
T ss_pred ec
Confidence 54
No 134
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.80 E-value=7e-18 Score=163.85 Aligned_cols=203 Identities=17% Similarity=0.159 Sum_probs=146.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~ 183 (334)
...++|..|+ ..+..++.+++++.+.. .+...+....|..++.+.+.+.+.+++| .+++++++++++|+..++.
T Consensus 24 ~~~i~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~ 102 (382)
T PRK06108 24 EGVLPLWFGE-SDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQ 102 (382)
T ss_pred CCeEEecCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHH
Confidence 4578998886 35767889999876542 2222344445666666777777766666 3567888899999999998
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC--------CHHHHHHHHhcCCCCcEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC--------DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~--------D~~~Le~~l~~~~~~~~l 255 (334)
+++++ +|.|+++.+.|..+...++.. |++++.++.+ |+++|++.++. ++++
T Consensus 103 ~l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~ 161 (382)
T PRK06108 103 ALVGP--------------GDEVVAVTPLWPNLVAAPKIL----GARVVCVPLDFGGGGWTLDLDRLLAAITP---RTRA 161 (382)
T ss_pred HhcCC--------------CCEEEEeCCCccchHHHHHHC----CCEEEEeeCCCCCCCccCCHHHHHHhcCc---cceE
Confidence 87764 788888888888777666655 7888877652 57788877753 6788
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC--CCccEEEecCcccccCCc--
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE--RDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~--~~~Div~~SlsKa~G~~G-- 328 (334)
|++++++||+|.+.+ +++|+++|+++|+++|+||+|....+++.+. ......+. .+..|+++||||.||+.|
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 240 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGR-APSFLDIAEPDDRIIFVNSFSKNWAMTGWR 240 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCC-CCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence 888899999998776 6789999999999999999999876642111 11111121 233588999999998877
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 241 iG~~~~~ 247 (382)
T PRK06108 241 LGWLVAP 247 (382)
T ss_pred eeeeeCC
Confidence 888764
No 135
>PRK07678 aminotransferase; Validated
Probab=99.80 E-value=2.3e-18 Score=171.91 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=140.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCC-cEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKE-DCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e-~alv~~sG~~An 178 (334)
+|.+|++||||.+. ..||. +||+|.+|+.+. ......+. .. .++...+|.++|+++.+.. .+++++||++|+
T Consensus 42 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~-~~-~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~ 118 (451)
T PRK07678 42 TDIQGNRYLDGMSGLWCVNVGY-GRKELAEAAYEQLKTLSYFPL-TQ-SHEPAIKLAEKLNEWLGGEYVIFFSNSGSEAN 118 (451)
T ss_pred EeCCCCEEEEccccHHhhcCCC-CCHHHHHHHHHHHHhcCcccc-cc-CCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHH
Confidence 56788999999875 45777 489999977543 33322222 12 2466688999999988654 567779999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC------------
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH------------ 236 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~------------ 236 (334)
+++++....- +.... .+++..+|.....+|+.....+.++... .+...+.++.
T Consensus 119 e~AlklAr~~----t~~~g-~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (451)
T PRK07678 119 ETAFKIARQY----HAQKG-EPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDI 193 (451)
T ss_pred HHHHHHHHHH----HHhcC-CCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHH
Confidence 9999965431 10000 0123566777888999876665443110 0111111110
Q ss_pred CCH---HHHHHHHh-cCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cccc
Q 019931 237 CDM---SHLKTLLS-CCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQF 307 (334)
Q Consensus 237 ~D~---~~Le~~l~-~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~ 307 (334)
+|. +.++++++ ..+.+...|++|++.+..|.+.| |++|+++|++||++||+||+++. +|++|..+ ++++
T Consensus 194 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tG--fGRtG~~~~~~~~ 271 (451)
T PRK07678 194 YDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICG--FGRTGKAFGFMNY 271 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhc--CCcCchhHHHHhc
Confidence 112 23566775 22346889999999998887766 89999999999999999999974 78888654 5778
Q ss_pred CCCCCccEEEecCcccccC
Q 019931 308 NCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~ 326 (334)
++.| ||+ ||+|++|.
T Consensus 272 gv~P--Div--t~gK~lgg 286 (451)
T PRK07678 272 GVKP--DII--TMAKGITS 286 (451)
T ss_pred CCCC--CEE--Eeeccccc
Confidence 9887 455 89999974
No 136
>PRK12414 putative aminotransferase; Provisional
Probab=99.80 E-value=7.4e-18 Score=164.62 Aligned_cols=203 Identities=13% Similarity=0.168 Sum_probs=149.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~ai 182 (334)
..+++|..++ ..+..++.+.+++.+. ..+...+....|...+.+++++.+++++|. +.+++++++++|+..++
T Consensus 29 ~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 29 HDALNLSQGA-PNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred CCeEEcCCCC-CCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 5678998876 3465688888876542 122233445567778888899988888885 35888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lV 256 (334)
.+++.+ ||.|++..+.|......++.. |.+++.++.. |++.|++++++ ++++|
T Consensus 108 ~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~---~~~~v 166 (384)
T PRK12414 108 SALVHP--------------GDEVIYFEPSFDSYAPIVRLQ----GATPVAIKLSPEDFRVNWDEVAAAITP---RTRMI 166 (384)
T ss_pred HHhcCC--------------CCEEEEeCCCccchHHHHHHc----CCEEEEEecCccccccCHHHHHhhcCc---ccEEE
Confidence 888764 788888888887777666665 7777777642 67888887753 68888
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
++.+++||+|.+.+ +++|+++|++||+++|+||+|....++.. ...+..+.+. .+..|+++||||+||..| |
T Consensus 167 ~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRiG 245 (384)
T PRK12414 167 IVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL-AERSVIVSSFGKSYHVTGWRVG 245 (384)
T ss_pred EEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc-cCcEEEEecccccccCccceEE
Confidence 88999999998754 78889999999999999999997655321 1122221122 223489999999999877 9
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 246 ~~v~~ 250 (384)
T PRK12414 246 YCLAP 250 (384)
T ss_pred EEecC
Confidence 98764
No 137
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=2.8e-18 Score=170.36 Aligned_cols=159 Identities=16% Similarity=0.136 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..+++|++++++.|.+.+++|+||++|+.+++.++.++ ||.|++....|.+....+.......|
T Consensus 68 ~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~--------------Gd~VI~~~~~y~~t~~~~~~~l~~~G 133 (437)
T PRK05613 68 NPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGA--------------GDHIVTSPRLYGGTETLFLVTLNRLG 133 (437)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCC--------------CCEEEECCCccHHHHHHHHHHHHhcC
Confidence 4778999999999999999999999999999888877654 78888777777766432221112237
Q ss_pred cEEEEee-CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYK-HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~-~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+++..++ ..|++++++++++ ++++|+++++.|+.|.+.|+++|.++|+++|+++|+|.+|+.|.. +.
T Consensus 134 i~v~~vd~~~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~---------~~ 201 (437)
T PRK05613 134 IEVTFVENPDDPESWQAAVQP---NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL---------VR 201 (437)
T ss_pred eEEEEECCCCCHHHHHHhCCc---cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc---------cC
Confidence 8888886 5688999988864 688999999999999999999999999999999999999987643 11
Q ss_pred CCCCCccEEEecCcccccCC----ccEEee
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
++..++|+++.|++|.+++. ||+++.
T Consensus 202 p~~~GaDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 202 PLELGADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred hHHhCCCEEEeeccceecCCCcceeEEEEe
Confidence 22346799999999999863 677763
No 138
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.80 E-value=5.3e-18 Score=168.88 Aligned_cols=205 Identities=19% Similarity=0.172 Sum_probs=139.3
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC----CcEEEe-cc
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK----EDCLLC-PT 173 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~-~s 173 (334)
.+|.+|++||||.++ ..||. +||+|.+|+.+. ..+...+... -.++...+|.++|+++.+. ...++| +|
T Consensus 33 l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 33 VTDVEGKEYLDFLAGAGTLALGH-NHPNMKQKILDYLQSGLPLHTLD-LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred EEeCCCCEEEEccccHhhhcCCC-CCHHHHHHHHHHHHhccCccccc-cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 356788999999875 34677 489999987553 3332222211 1257778899999998753 244555 89
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---CC-----cEEEEeeCCC-------
Q 019931 174 GFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---KM-----VEVFVYKHCD------- 238 (334)
Q Consensus 174 G~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~g-----~~v~~~~~~D------- 238 (334)
|++||.++++.... .+++..+|.....+|+.....+.++... .+ ..+...+..+
T Consensus 111 GsEA~e~AlklAr~-----------~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (442)
T TIGR00709 111 GADAVEAAIKLAKT-----------YTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFG 179 (442)
T ss_pred HHHHHHHHHHHHHH-----------hcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccccccc
Confidence 99999999996443 2345667888889999877666554200 00 1122222211
Q ss_pred ------H----HHHHHHHhc---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 239 ------M----SHLKTLLSC---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 239 ------~----~~Le~~l~~---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
. +.+++.+.. ...+...|++|++.+..|.+.| |++|+++|++||++||+||+++ | +|++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G-fGRtG~ 257 (442)
T TIGR00709 180 IGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA-G-FGRSGT 257 (442)
T ss_pred CCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCCc
Confidence 1 223444432 1236789999999998886644 8999999999999999999998 4 788887
Q ss_pred ccc-cccCCCCCccEEEecCcccccC
Q 019931 302 GVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 302 g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+++ +++++.| ||+ +|+|++|+
T Consensus 258 ~~a~~~~gv~P--Div--~~gK~l~~ 279 (442)
T TIGR00709 258 MFAFEHAGIEP--DFV--VMSKAVGG 279 (442)
T ss_pred hhHHHHcCCCC--cEE--EEcccccC
Confidence 664 6788877 566 59999975
No 139
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=2.4e-18 Score=172.33 Aligned_cols=209 Identities=15% Similarity=0.077 Sum_probs=144.1
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
+|.+|++||||.+. ..||. +||+|.+|+.+. ......+.. .-.++...+|.++|+++.. .+.+++++||++|
T Consensus 42 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEA 119 (466)
T PRK07030 42 EDFEGKRYLDAVSSWWVNVFGH-ANPRINQRIKDQVDQLEHVILA-GFSHEPVIELSERLVKITPPGLSRCFYADNGSSA 119 (466)
T ss_pred EECCCCEEEEcchhHHhhcCCC-CCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHH
Confidence 46788999999875 34677 489999977543 222222221 1125777889999999874 4678888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----------CcEEEEeeC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----------MVEVFVYKH----------- 236 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----------g~~v~~~~~----------- 236 (334)
|..+++........ . -.+++..+|.....+|+.....+.++.... +...++++.
T Consensus 120 ve~AlKlAr~~~~~--~---g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~ 194 (466)
T PRK07030 120 IEVALKMSFHYWRN--R---GKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWE 194 (466)
T ss_pred HHHHHHHHHHHHHH--h---CCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHH
Confidence 99999965321000 0 012345677788889998766665542110 011111111
Q ss_pred ----CCHHHHHHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cc
Q 019931 237 ----CDMSHLKTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQ 306 (334)
Q Consensus 237 ----~D~~~Le~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~ 306 (334)
++++.+++++.+...+...|++|+ +.+..|.+.| +++|+++|++||++||+||+++. +|++|.+++ ++
T Consensus 195 ~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TG--fGRtG~~~a~~~ 272 (466)
T PRK07030 195 EHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVG--FGRTGTMFACEQ 272 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhC--cCccccchHHHh
Confidence 135667888875445788999999 6877787655 89999999999999999999984 789888764 78
Q ss_pred cCCCCCccEEEecCccccc
Q 019931 307 FNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G 325 (334)
+++.|| |+ +|+|++|
T Consensus 273 ~gv~PD--iv--~~gKgl~ 287 (466)
T PRK07030 273 AGIRPD--FL--CLSKALT 287 (466)
T ss_pred cCCCCC--EE--eeehhcc
Confidence 899874 55 8999996
No 140
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.80 E-value=5.3e-18 Score=167.82 Aligned_cols=203 Identities=14% Similarity=0.161 Sum_probs=140.3
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~ 176 (334)
+|.+|++||||.+. ..||.+ ||+|.+|+++. ....... ......+...+|.++|+++.. .+++++++||++
T Consensus 28 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGse 105 (420)
T TIGR00700 28 EDVDGNRLIDFASGIAVLNIGHS-HPRVVDAVRTQVAEFTHTC-FMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAE 105 (420)
T ss_pred EeCCCCEEEECccCHHhccCCCC-CHHHHHHHHHHHHhccCcc-ccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHH
Confidence 56788999999775 346774 89999987543 2222111 111224556789999999874 257888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh----cCC-----cEEEEeeCC----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER----TKM-----VEVFVYKHC---------- 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~----~~g-----~~v~~~~~~---------- 237 (334)
|+.++++.... .+++..+|.....+|+.....+.++.. ..+ ..+...+..
T Consensus 106 A~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 106 AVENAVKIARS-----------YTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred HHHHHHHHHHH-----------hcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 99999985432 234566777888899987666654321 001 011112111
Q ss_pred ------CHHHHHHHHh--cCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c
Q 019931 238 ------DMSHLKTLLS--CCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A 304 (334)
Q Consensus 238 ------D~~~Le~~l~--~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~ 304 (334)
+++.+++++. ..+++..+|++|++.+.+|.+.| +++|+++|++||++||+||+++. +|++|.++ .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg--~gr~g~~~a~ 252 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTG--FARTGAMFAC 252 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccC--CcccchhHHH
Confidence 2456777764 22346789999999999998776 89999999999999999999984 67777654 3
Q ss_pred cccCCCCCccEEEecCccccc
Q 019931 305 EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G 325 (334)
+++++.| ||+ ||||+++
T Consensus 253 ~~~~~~p--Di~--~lsK~l~ 269 (420)
T TIGR00700 253 EHEGPEP--DLI--TTAKSLA 269 (420)
T ss_pred hhcCCCC--CEE--Eeecccc
Confidence 5677766 444 7999998
No 141
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=2e-18 Score=172.61 Aligned_cols=209 Identities=15% Similarity=0.113 Sum_probs=144.2
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~A 177 (334)
+|.+|++||||.++ ..||. +||+|.+|+.+. ......+.... .++...+|.++|+++.+. +++++++||++|
T Consensus 51 ~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA 128 (460)
T PRK06916 51 YDVNGNEYYDGVSSIWLNVHGH-QVPELDEAIREQLNKIAHSTLLGL-ANVPSILLAEKLIEVVPEGLKKVFYSDSGATA 128 (460)
T ss_pred EeCCCCEEEEcchhHHHhhcCC-CCHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 56788999999875 34676 589999977543 32222222212 256668999999998753 578888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----------CcEEEEeeC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----------MVEVFVYKH----------- 236 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----------g~~v~~~~~----------- 236 (334)
|..+++........ .+ .+++..+|.....+|+.....+.++.... +.....++.
T Consensus 129 ve~AlklAr~~~~~--~g---~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~ 203 (460)
T PRK06916 129 VEIAIKMAFQYWQN--KG---KPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKA 203 (460)
T ss_pred HHHHHHHHHHHHHh--cC---CCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChH
Confidence 99999964431000 00 12345677788889998766665542110 111111110
Q ss_pred ----CCHHHHHHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cc
Q 019931 237 ----CDMSHLKTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQ 306 (334)
Q Consensus 237 ----~D~~~Le~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~ 306 (334)
.+++.+++++++...+...|++|+ +.+..|.+.| |++|+++|++||++||+||+++ | +|++|.+++ ++
T Consensus 204 ~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T-G-~GRtG~~~a~~~ 281 (460)
T PRK06916 204 EIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT-G-FGRTGKMFACEH 281 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-C-CCcCchhhHHHh
Confidence 135667788865445788999999 6888787654 8999999999999999999996 5 799998764 68
Q ss_pred cCCCCCccEEEecCccccc
Q 019931 307 FNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G 325 (334)
+++.|| |+ +|+|++|
T Consensus 282 ~gv~PD--iv--~~gK~l~ 296 (460)
T PRK06916 282 ENVTPD--IM--TAGKGLT 296 (460)
T ss_pred cCCCCC--ee--eeehhhh
Confidence 898874 55 8999996
No 142
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=3.2e-18 Score=167.30 Aligned_cols=158 Identities=15% Similarity=0.113 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++++++.|.+.+++++||+.|+.+++. ++++ ||.|++....|......+.......+
T Consensus 49 ~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l~-~l~p--------------Gd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGIHAVFS-LFQS--------------GDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHH-HcCC--------------CCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 46679999999999999999999999999886664 5554 67777666555544333321112237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|+++++.||+|.+.|+++|.++|+++|+++|+|++++.+.+++ .
T Consensus 114 i~v~~vd~~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~---------p 181 (380)
T PRK06176 114 LSCTIIDTSDLSQIKKAIKP---NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN---------P 181 (380)
T ss_pred eEEEEcCCCCHHHHHHhcCc---CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC---------c
Confidence 88888888899999988864 78999999999999999999999999999999999999998764422 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++|+++.|++|.+++ .||++++
T Consensus 182 ~~~gaDivv~S~tK~l~g~~d~~gG~vv~ 210 (380)
T PRK06176 182 LLLGADIVVHSGTKYLGGHSDVVAGLVTT 210 (380)
T ss_pred cccCCCEEEecCceeccCCccceeeEEEe
Confidence 234679999999999975 4687765
No 143
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.6e-19 Score=165.20 Aligned_cols=209 Identities=18% Similarity=0.149 Sum_probs=155.8
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAAN 178 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An 178 (334)
-||..|++|+||-|. -..|. +||.|++++++ +..-.-.||.++ .....++++.+++++|.+.++-+++|.+|+
T Consensus 53 vwD~eGk~ylDflsaysaVnqGh-chpki~~aLqeq~~kLtlssrafY--nd~~~~f~~~vt~lf~~~kvlpmnTGaEa~ 129 (427)
T KOG1402|consen 53 VWDPEGKEYLDFLSAYSAVNQGH-CHPKIIKALQEQADKLTLSSRAFY--NDVLGEFAEYVTKLFGYDKVLPMNTGAEAV 129 (427)
T ss_pred EECCCccchhhhhhhhhhcccCC-CCHHHHHHHHHHHhHhhhhhHHHh--hhhHHHHHHHHHHhcCcceeeecccchhHH
Confidence 478999999999763 23555 59999998865 333344566665 577789999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----C----CcEEEEeeCCCHHHHHHHHhcC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----K----MVEVFVYKHCDMSHLKTLLSCC 249 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~----g~~v~~~~~~D~~~Le~~l~~~ 249 (334)
..+++. ++++.... ..+.+++..++.+....|+-+...+.++... . ...+..++.+|.++||..|+.
T Consensus 130 Eta~KL-aR~wgy~~--K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~- 205 (427)
T KOG1402|consen 130 ETACKL-ARKWGYRK--KNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS- 205 (427)
T ss_pred HHHHHH-HHHHHHhh--ccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC-
Confidence 999985 44322110 1111223345556677787666555444210 0 112456678899999999986
Q ss_pred CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccc
Q 019931 250 TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~ 324 (334)
++.+.+++|++....|.+.| |++.++||.+|++++|.||+|+. +|++|+.++ ++..+.|+ |+ -|+|+|
T Consensus 206 -~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTG--l~RTGk~la~d~env~PD--iv--ilgKal 278 (427)
T KOG1402|consen 206 -PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTG--LARTGKLLACDYENVRPD--IV--ILGKAL 278 (427)
T ss_pred -CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhc--ccccCcEEEeehhhcCCC--eE--EEeccc
Confidence 57889999999999998877 99999999999999999999994 899999875 56667674 55 489999
Q ss_pred c
Q 019931 325 G 325 (334)
Q Consensus 325 G 325 (334)
+
T Consensus 279 S 279 (427)
T KOG1402|consen 279 S 279 (427)
T ss_pred c
Confidence 6
No 144
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.9e-18 Score=167.96 Aligned_cols=155 Identities=16% Similarity=0.072 Sum_probs=126.0
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
..+..+.||++|+.+.+.+.+++++||++|+..++.+++++ ||.|++....+.+....+.......
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~--------------GD~Vlv~~~~Y~~~~~l~~~~l~~~ 127 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSP--------------GDHALIVDSVYYPTRHFCDTMLKRL 127 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCC--------------CCEEEEccCCcHHHHHHHHHHHHhc
Confidence 35888999999999999999999999999999999988875 7777776666666543321111223
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
|.++..++..+.+.+++++++ +|++|++|++.|+.+.+.|+++|+++|+++|+++++|++++.+++- .
T Consensus 128 Gi~v~~vd~~~~e~l~~al~~---~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~---------~ 195 (395)
T PRK05967 128 GVEVEYYDPEIGAGIAKLMRP---NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF---------R 195 (395)
T ss_pred CeEEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec---------C
Confidence 788888877777888888864 7999999999999999999999999999999999999999876531 2
Q ss_pred CCCCCccEEEecCcccccCCc
Q 019931 308 NCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~G 328 (334)
++..++||++.|++|++++.|
T Consensus 196 pl~~GaDivv~S~tKy~~Gh~ 216 (395)
T PRK05967 196 PLDFGVDISIHAATKYPSGHS 216 (395)
T ss_pred hhHcCCCEEEEecccccCCCC
Confidence 344578999999999998744
No 145
>PLN00175 aminotransferase family protein; Provisional
Probab=99.79 E-value=1.2e-17 Score=164.79 Aligned_cols=203 Identities=12% Similarity=0.077 Sum_probs=145.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai 182 (334)
..++||..++ .++..++.+++++.+.-. +...+....|..++.+.+.+.+.+..|. + .+++++++++|+..++
T Consensus 54 ~~~i~l~~G~-P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~ 132 (413)
T PLN00175 54 HGAINLGQGF-PNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATI 132 (413)
T ss_pred CCeEecCCCC-CCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHH
Confidence 4688998876 466678888887655422 2233334445555555555555554442 3 4667777889999988
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lV 256 (334)
.+++++ ||.|++..+.|......++.. |++++.++. .|++.|++.+.. ++++|
T Consensus 133 ~~l~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~l~~~~~~---~~k~i 191 (413)
T PLN00175 133 LGLINP--------------GDEVILFAPFYDSYEATLSMA----GAKIKTVTLRPPDFAVPEDELKAAFTS---KTRAI 191 (413)
T ss_pred HHhCCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEEECCcccCCCCHHHHHHhcCc---CceEE
Confidence 888764 788888888888777777666 788887764 267888888754 68899
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cE
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GF 330 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~ 330 (334)
++.+++||+|.+.+ +++|+++|++|++++|+||+|....++.....+....+. .+..|+++||||.||..| ||
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~-~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM-YERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC-cCcEEEEecchhhccCcchheee
Confidence 99999999999876 777899999999999999999977664322222222222 234589999999999888 99
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 271 ~v~~ 274 (413)
T PLN00175 271 AIAP 274 (413)
T ss_pred eEeC
Confidence 8874
No 146
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=3.7e-18 Score=171.09 Aligned_cols=210 Identities=15% Similarity=0.093 Sum_probs=142.9
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC-------CcEEEe
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK-------EDCLLC 171 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~-------e~alv~ 171 (334)
.++.+|++||||++. ..||. +||+|.+|+++.. .-...+.... .++...+|.++|+++... ++++++
T Consensus 58 l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~ 135 (472)
T PRK08742 58 LVGHDGRRYLDAVSSWWTNLFGH-AEPRIGAAIAAQAGELEQVMLAGF-THEPAVQLAEQLLAIAPRQDGRAPLSKVFYA 135 (472)
T ss_pred EEeCCCCEEEEcCccHHhccCCC-CCHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCcccCCCCCEEEEe
Confidence 457889999999875 34777 4899999875432 1111111111 246678999999998742 578888
Q ss_pred ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC-----C---cEEEEeeCC------
Q 019931 172 PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK-----M---VEVFVYKHC------ 237 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~-----g---~~v~~~~~~------ 237 (334)
+||++||.++++....-.. ..+ .+++..+|.....+|+.....+.++.... . ..+..++..
T Consensus 136 ~sGSEAvE~AlKlAr~~~~--~~g---~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~ 210 (472)
T PRK08742 136 DNGSAGVEVALKMAFHYFH--NRG---EHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAE 210 (472)
T ss_pred CCchHHHHHHHHHHHHHHH--hcC---CCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccc
Confidence 9999999999996543100 000 12345677788889998766655432100 0 011122221
Q ss_pred -----------CHHHHHHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 238 -----------DMSHLKTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 238 -----------D~~~Le~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
+++.+++++.....+...|++|+ +.+..|.+.| |++|+++|++||++||+||+++. +|++|.
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TG--fGRtG~ 288 (472)
T PRK08742 211 PGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATG--FGRTGT 288 (472)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCCCcc
Confidence 24667777764444788999999 5777786554 89999999999999999999984 789998
Q ss_pred cc-ccccCCCCCccEEEecCccccc
Q 019931 302 GV-AEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 302 g~-~~~~~~~~~~Div~~SlsKa~G 325 (334)
++ .+++++.| ||+ +|+|++|
T Consensus 289 ~~a~e~~gv~P--Div--~~gKgl~ 309 (472)
T PRK08742 289 LFACEQAGVMP--DLL--CLSKGLT 309 (472)
T ss_pred chHHHhcCCCC--CEE--EEccccc
Confidence 77 47889887 455 8999996
No 147
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=4.2e-18 Score=164.82 Aligned_cols=198 Identities=16% Similarity=0.097 Sum_probs=137.7
Q ss_pred ceeEEEeecC-ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHH
Q 019931 108 FKRLLLFSGN-DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 108 g~~~l~f~sn-~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~a 184 (334)
+++++||++| +++|. +|.+++++.+.-.....+ +. ....+|+++++++++.+ .+++++++++++..++.+
T Consensus 31 ~~~~i~l~~~~~~~~~--~~~~~~a~~~~~~~~~~y----~~-~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~ 103 (367)
T PRK02731 31 IADIIKLASNENPLGP--SPKAIEAIRAAADELHRY----PD-GSGFELKAALAEKFGVDPERIILGNGSDEILELLARA 103 (367)
T ss_pred CCceEEecCCCCCCCC--CHHHHHHHHHHHHhhcCC----CC-CcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHH
Confidence 4789999998 46664 788888776542211111 11 11368999999999864 344445555566666676
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcC
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
++++ ||.|+++.+.|.......... |++++.++.+ |++++++++++ ++++|++++
T Consensus 104 l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~ 162 (367)
T PRK02731 104 YLGP--------------GDEVIYSEHGFAVYPIAAQAV----GAKPVEVPAKDYGHDLDAMLAAVTP---RTRLVFIAN 162 (367)
T ss_pred hcCC--------------CCEEEEecCCHHHHHHHHHHc----CCeEEEecccCCCCCHHHHHHHhCC---CCcEEEEeC
Confidence 6553 788888877776555444443 7888887653 78888888753 678888899
Q ss_pred CCCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.|+++|.++++.+ |+++|+||+|....++..........+..++ .|+++||||.||..| ||++++
T Consensus 163 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPN-VVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCC-EEEEeeehHhhcCcccceeeeeCC
Confidence 999999999999999999875 8999999999875543211111122222233 488999999998877 898864
No 148
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=2.9e-18 Score=169.73 Aligned_cols=215 Identities=13% Similarity=0.071 Sum_probs=141.3
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.+. ..||. +||+|.+|+.+. ........ ..-.++...+|.++|++..+ .+++++++||++
T Consensus 34 l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGse 111 (422)
T PRK05630 34 LTLEDGSTVIDAMSSWWSAAHGH-GHPRLKAAAHKQIDTMSHVMF-GGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSV 111 (422)
T ss_pred EEECCCCEEEEcchhHHHhcCCC-CCHHHHHHHHHHHHhCCCccc-CCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHH
Confidence 356788999999874 44777 489999977543 22221111 11135667889999999874 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC------C---cEEEEeeCC-----C----
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK------M---VEVFVYKHC-----D---- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~------g---~~v~~~~~~-----D---- 238 (334)
|+.++++....-.. ..+ .+++..+|.....+|+.....+.++.... + ..+..++.. +
T Consensus 112 A~e~AlklAr~~~~--~~g---~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 186 (422)
T PRK05630 112 SVEVAIKMALQYSK--GQG---HPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEI 186 (422)
T ss_pred HHHHHHHHHHHHHH--hcC---CCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHH
Confidence 99999996433100 000 01235677788889987665554432100 0 011111111 1
Q ss_pred ---HHHHHHHHhcCCCCcEEEEEcCC-CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCC
Q 019931 239 ---MSHLKTLLSCCTMRKKVVVTDSL-FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNC 309 (334)
Q Consensus 239 ---~~~Le~~l~~~~~~~~lVv~e~v-~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~ 309 (334)
.+.+++++. .+...|++|++ .+..|.+.| +++|+++|++||++||+||+|. | +|++|.+++ +++++
T Consensus 187 ~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G-~GrtG~~~a~~~~gv 261 (422)
T PRK05630 187 SEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-G-FGRTGELFATLAAGV 261 (422)
T ss_pred HHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-C-CCcCchhhHHHhcCC
Confidence 234455454 26889999996 877776544 8999999999999999999995 6 599998874 67888
Q ss_pred CCCccEEEecCcccccC---CccEEee
Q 019931 310 ERDVDICVGTLSKAAGC---QGGFIAC 333 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~---~GG~i~~ 333 (334)
.| ||+ ||+|++|. .+|++++
T Consensus 262 ~P--Di~--t~gK~l~gG~~p~~av~~ 284 (422)
T PRK05630 262 TP--DIM--CVGKALTGGFMSFAATLC 284 (422)
T ss_pred CC--Cee--eeechhhcCccccceeec
Confidence 87 455 89999942 3555554
No 149
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.79 E-value=2.2e-18 Score=162.60 Aligned_cols=173 Identities=20% Similarity=0.199 Sum_probs=138.6
Q ss_pred HHHHhcC---CCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEE
Q 019931 131 AAARHGM---GPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIF 207 (334)
Q Consensus 131 a~~~~g~---g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl 207 (334)
+...|+. |.--+|+. .|..+.||++|+.+.|.-.++.+.||.+|...+|..++++ ||.|+
T Consensus 43 aa~lF~l~~~G~iYsRi~---NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~a--------------GD~iV 105 (426)
T COG2873 43 AAALFGLKEPGNIYTRIM---NPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGA--------------GDNIV 105 (426)
T ss_pred HHHHhCCCcCCceeeecc---CchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccC--------------CCeeE
Confidence 4444543 33334554 3677889999999999989999999999999999999876 66666
Q ss_pred EcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 208 SDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 208 ~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
+...-++....-+....+..|.++++++.+|++.+++.+++ +||+|++|++-||.+++.|+++|.++|+++|+.|||
T Consensus 106 ss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~---nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliV 182 (426)
T COG2873 106 SSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDE---NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIV 182 (426)
T ss_pred eeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCc---ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEE
Confidence 55443344444444444455999999999999999999986 899999999999999999999999999999999999
Q ss_pred ecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEe
Q 019931 288 DDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 288 DeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
|...+.+.+ ..+++.++|||+.|++|.+|+ +||+|+
T Consensus 183 DNT~atpyl---------~rP~~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 183 DNTFATPYL---------CRPIEHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred ecCCCccee---------cchhhcCCCEEEEeecccccCCccccceEEE
Confidence 998887643 124556789999999999987 467775
No 150
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=5.2e-18 Score=165.65 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++.|.+.+++++||+.|+..++ +++++ ||.|++....|.+....+.......|
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~--------------Gd~Viv~~~~y~~~~~~~~~~~~~~G 113 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSS--------------GDHVILTDDVYGGTYRVMTKVLNRFG 113 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCC--------------CCEEEECCCccchHHHHHHHHHhcCC
Confidence 4777999999999999999999999998877665 45543 77777776666644332221111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.++. .
T Consensus 114 ~~v~~v~~~d~~~l~~ai~~---~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~---------p 181 (377)
T PRK07671 114 IEHTFVDTSNLEEVEEAIRP---NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS---------P 181 (377)
T ss_pred eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC---------h
Confidence 88888888899999998864 78999999999999999999999999999999999999998654432 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+|+ .||++++
T Consensus 182 ~~~g~Divv~S~sK~l~G~~~~~~G~~v~ 210 (377)
T PRK07671 182 ISLGADIVLHSATKYLGGHSDVVAGLVVV 210 (377)
T ss_pred hhhCCeEEEecCcccccCCccceeEEEEe
Confidence 223568999999999985 4676654
No 151
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=5.5e-18 Score=166.96 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=125.2
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|+++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 59 ~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~p--------------GD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQP--------------GDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCC--------------CCEEEEccCCchHHHHHHHHHHHhcC
Confidence 4677899999999999999999999999999999888765 77777766666553332222111226
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.+++.++..|+++|++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|..+.. +..
T Consensus 125 ~~v~~v~~~d~~~l~~~i~~---~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~---------~~p 192 (405)
T PRK08776 125 FALITADLTDPRSLADALAQ---SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL---------QKP 192 (405)
T ss_pred cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc---------CCc
Confidence 77788887899999988864 789999999999999999999999999999999999999986532 112
Q ss_pred CCCCccEEEecCcccccCC----ccEEee
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
+..++||++.|++|.|++. ||++++
T Consensus 193 l~~gaDivv~S~tK~l~g~~~~~~G~vv~ 221 (405)
T PRK08776 193 LEFGADLVLHSTTKYINGHSDVVGGAVVA 221 (405)
T ss_pred ccccCCEEEecCceeecCCCCceEEEEEe
Confidence 2235789999999999753 576654
No 152
>PRK07481 hypothetical protein; Provisional
Probab=99.79 E-value=5.8e-18 Score=168.91 Aligned_cols=211 Identities=14% Similarity=0.090 Sum_probs=142.7
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~ 175 (334)
.+|.+|++||||.+. ..||. +||+|.+|+++. ..+...+....-.++...+|.++|+++.+ .+++++++||+
T Consensus 36 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGs 114 (449)
T PRK07481 36 VYDIDGKKLLDGVGGLWNVNVGH-NREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGS 114 (449)
T ss_pred EEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchH
Confidence 356788999999773 45777 489999987543 33322222212235777899999999873 46788889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEee------CC--
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYK------HC-- 237 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~------~~-- 237 (334)
+|++++++........ .+ .+++..+|.....+|+.....+.++... .+.....++ .+
T Consensus 115 EAve~AlklAr~~~~~--~g---~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 189 (449)
T PRK07481 115 DSVETALKLARQYWKV--RG---QPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQ 189 (449)
T ss_pred HHHHHHHHHHHHHHHh--cC---CCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCC
Confidence 9999999964431000 00 0134567778888999766555433110 011111111 22
Q ss_pred CHHHH--------HHHHh-cCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-
Q 019931 238 DMSHL--------KTLLS-CCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV- 303 (334)
Q Consensus 238 D~~~L--------e~~l~-~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~- 303 (334)
|.+.+ |+++. ..+.+..+|++|++.+..|.+.| |++|+++|++||++||+||+++ | +|++|.++
T Consensus 190 d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-G-fGRtG~~~a 267 (449)
T PRK07481 190 DPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-G-FGRTGSWFG 267 (449)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-C-cCcCchhhH
Confidence 44443 44443 22346789999999999888765 9999999999999999999998 4 78998876
Q ss_pred ccccCCCCCccEEEecCccccc
Q 019931 304 AEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G 325 (334)
.+++++.| ||+ +++|++|
T Consensus 268 ~~~~gv~P--Div--~~gKgl~ 285 (449)
T PRK07481 268 SRGWGVKP--DIM--CLAKGIT 285 (449)
T ss_pred hhhcCCCC--CEE--EEeeccc
Confidence 46788887 455 8999996
No 153
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.79 E-value=1.6e-17 Score=161.79 Aligned_cols=204 Identities=16% Similarity=0.129 Sum_probs=139.1
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ 180 (334)
|+.+++|.+|+ ..+..++.+++++.+.-. . ...+....|..++.+.+.+.+.+.+|. + .+++++++.+++..
T Consensus 28 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~ 106 (383)
T TIGR03540 28 GVDVISLGIGD-PDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH 106 (383)
T ss_pred CCCeEEeCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence 37889999987 467678888887765322 1 122333344444444444444433343 3 35556777889888
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++++ ||.|++..+.+......++.. |++++.++.+ |++++++.+.+ ++
T Consensus 107 ~~~~~~~~--------------gd~vlv~~P~y~~~~~~~~~~----G~~v~~v~~~~~~g~~~d~~~l~~~~~~---~~ 165 (383)
T TIGR03540 107 IPLAFVNP--------------GDIVLVPDPGYPVYRIGTLFA----GGEPYEMPLKEENGFLPDFDAIPEDIAK---KA 165 (383)
T ss_pred HHHHhCCC--------------CCEEEEeCCCCcchHHHHHhc----CCEEEEEecCcccCCccCHHHHHhhccc---cc
Confidence 88887764 788888888877766666555 7888877642 56777776643 68
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEecCcccccCCc-
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
++|++.+++||+|.+.+ +++|+++|++||++||+||+|....+.... ..+.. +.-..+..|+++||||+||..|
T Consensus 166 ~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 166 KLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLE-VDGAKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred eEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCccc-CCCcccCEEEEEecccccCCccc
Confidence 89888899999999998 678899999999999999999875553211 11111 1111234588999999999888
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 245 RiG~~i~~ 252 (383)
T TIGR03540 245 RIGMAVGN 252 (383)
T ss_pred eeeEEeCC
Confidence 898764
No 154
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=4.5e-18 Score=166.43 Aligned_cols=159 Identities=14% Similarity=0.136 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|+++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 50 ~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~--------------GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGP--------------DDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCC--------------CCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 3667999999999999999999999999999999988764 78888777777654433322111224
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|..++.. .+
T Consensus 116 ~~v~~~d~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---------~p 183 (382)
T TIGR02080 116 FRVLFVDQGDEQALRAALAQ---KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---------NP 183 (382)
T ss_pred eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC---------Cc
Confidence 66766666788999988864 6899999999999999999999999999999999999999876431 12
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+++ .+|++++
T Consensus 184 l~~gaDivv~S~sK~l~G~~~~~~G~i~~ 212 (382)
T TIGR02080 184 LALGADLVLHSCTKYLNGHSDVIAGAVIA 212 (382)
T ss_pred hhhCCCEEEeecceeccCCCCceeEEEEe
Confidence 223568999999999975 3677654
No 155
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.79 E-value=1.9e-17 Score=162.43 Aligned_cols=202 Identities=13% Similarity=0.176 Sum_probs=141.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhC----C-CcEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKK----K-EDCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g----~-e~alv~~sG~~An~~ 180 (334)
+.+++||+.++ ..+..++.+++++.+.-. ...++. ..|...+.+.+.+.+.+..| . +.+++++++.+|+..
T Consensus 31 ~~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 108 (399)
T PRK07681 31 GHKMIDLSIGN-PDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVH 108 (399)
T ss_pred CCCeEEeCCCC-CCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHH
Confidence 36789999886 456668888887765421 111121 24555555555555544333 2 456777888889888
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++.+ ||.|+++.+.|......+... |++++.++.+ |++++++.+.. ++
T Consensus 109 ~~~~~~~~--------------Gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~ 167 (399)
T PRK07681 109 LPMVYANP--------------GDIILVPDPGYTAYETGIQMA----GATSYYMPLKKENDFLPDLELIPEEIAD---KA 167 (399)
T ss_pred HHHHhCCC--------------CCEEEECCCCccchHHHHHhc----CCEEEEEecCCCCCCcCCHHHHHHhccc---cc
Confidence 88887764 788888888887777666665 8888888753 56777766643 68
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEecCcccccCCc
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~SlsKa~G~~G 328 (334)
++|++.+++||+|.+.+ +++|+++|++||++||+||+|....+... .......+ ..+..|+++||||+||..|
T Consensus 168 k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (399)
T PRK07681 168 KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINSLSKSYSLAG 245 (399)
T ss_pred eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEeecccccCCcc
Confidence 89999999999999988 77788999999999999999997655321 11111111 1234588999999999877
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 246 lRiG~~i~~ 254 (399)
T PRK07681 246 SRIGYMIGN 254 (399)
T ss_pred ceeEEEecC
Confidence 998764
No 156
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.78 E-value=5.1e-18 Score=164.88 Aligned_cols=160 Identities=22% Similarity=0.197 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+....||++++++.|.+.++.|+||+.|+.+++.+++++ ||.|+.....++....-+....++.+
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~--------------GD~vl~~~~~YG~t~~~~~~~l~~~g 127 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKA--------------GDHVLLPDDLYGGTYRLFEKILQKFG 127 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCC--------------CCEEEecCCccchHHHHHHHHHHhcC
Confidence 5777999999999999999999999999999999888875 66666554444444333332223358
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|.+.+++.+.+ +++++|++|+|.||+..+.|+++|+++|+++|+++|||+..+.+++ ..+
T Consensus 128 i~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~---------q~P 196 (396)
T COG0626 128 VEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL---------QRP 196 (396)
T ss_pred eEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccc---------cCh
Confidence 88888888787777777763 3799999999999999999999999999999999999999998865 234
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+.-++||++.|++|.+|+ .||+|++
T Consensus 197 L~~GaDIVvhSaTKyl~GHsDvl~G~v~~ 225 (396)
T COG0626 197 LELGADIVVHSATKYLGGHSDVLGGVVLT 225 (396)
T ss_pred hhcCCCEEEEeccccccCCcceeeeEEec
Confidence 556799999999999987 4676664
No 157
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=9.4e-18 Score=159.86 Aligned_cols=216 Identities=21% Similarity=0.259 Sum_probs=156.8
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHH-HHhcCCCCccccccCchHHHHHHHHHHHhHh---CCCcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAA-ARHGMGPRGSALICGYTNYHRLLESCLADLK---KKEDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~-~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~---g~e~alv~~sG~ 175 (334)
.+|.+|++|+||+|. ..+|.+ +|+|.+++ ++.......+...+ +....++++.|.+.. ..+++.|++||+
T Consensus 50 l~D~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k~~hs~~~~~--t~eav~l~~~l~~~~~~~~~~rvff~nsGT 126 (433)
T KOG1401|consen 50 LFDPDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAKKLGHSSNGYF--TLEAVELEEVLSAVLGKGSAERVFFCNSGT 126 (433)
T ss_pred eecCCcceeeeeccceeccccCCC-CHHHHHHHHHHHhhheeccCccc--cHHHHHHHHHHHhcccCCCccEEEEecCCc
Confidence 467889999999884 567876 89998865 45544433332222 333678999999988 468899999999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh-hcC-------CcEEEEeeCCCHHHHHHHHh
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE-RTK-------MVEVFVYKHCDMSHLKTLLS 247 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~-~~~-------g~~v~~~~~~D~~~Le~~l~ 247 (334)
+||+.+|+...+.. ...++. ++-.+|.....+|+-....+.... .+. -..++....||+.+|+++++
T Consensus 127 eAne~ALK~Ark~~----~~~~~~-~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~ 201 (433)
T KOG1401|consen 127 EANETALKFARKFT----GKKHPE-KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFE 201 (433)
T ss_pred HHHHHHHHHHHHhh----cccCCc-cceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHH
Confidence 99999998655431 111111 122477788899988766665431 011 12345566789999999999
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSK 322 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsK 322 (334)
.++....+|++|++....|.+++ |..|+++|+++|++||.||+++. +||.|.+.+ +++++.|| | .|++|
T Consensus 202 ~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG--~gR~g~~~a~e~~~~~PD--I--~t~aK 275 (433)
T KOG1401|consen 202 SHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTG--LGRLGYGWAQEYFGVTPD--I--TTVAK 275 (433)
T ss_pred hCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhC--ccccchHHHHHHhCcCCc--c--eeehh
Confidence 87656789999999998786544 77899999999999999999984 788888765 78898885 4 49999
Q ss_pred cccC---CccEEe
Q 019931 323 AAGC---QGGFIA 332 (334)
Q Consensus 323 a~G~---~GG~i~ 332 (334)
.+|. .|++++
T Consensus 276 ~L~gGlPigA~~v 288 (433)
T KOG1401|consen 276 PLGGGLPIGATGV 288 (433)
T ss_pred hccCCceeEEEee
Confidence 9974 455543
No 158
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=5.6e-18 Score=166.90 Aligned_cols=197 Identities=20% Similarity=0.236 Sum_probs=140.4
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHH-----HhcCCCCccccccCchHHHHHHHH----HHHhHhCCCcE-EEeccHHHH
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAA-----RHGMGPRGSALICGYTNYHRLLES----CLADLKKKEDC-LLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~-----~~g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e~a-lv~~sG~~A 177 (334)
+..+++.+| ++ -+|.|++++. +|+.|.++++...|. +.++++|+ .+++++|.+.+ ++++||++|
T Consensus 25 ~~~~~l~~~~n~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~a 99 (416)
T PRK00011 25 EEHIELIASENF----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYANVQPHSGSQA 99 (416)
T ss_pred hcCeeeecccCc----CCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceeeecCCchHH
Confidence 677887665 55 4899999764 456677777777774 44577777 89999998876 556889999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHH-HHhhhcCCcEEEEeeC------CCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGI-RIAERTKMVEVFVYKH------CDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~-~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~ 250 (334)
+..++.+++++ ||.|+++.+.|.+..... .......+++++.++. .|+++|++++++.
T Consensus 100 l~~~l~~l~~~--------------gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~- 164 (416)
T PRK00011 100 NAAVYFALLKP--------------GDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH- 164 (416)
T ss_pred HHHHHHHhcCC--------------CCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc-
Confidence 99999888654 788999888887543211 1111111456665543 4899999998642
Q ss_pred CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCcc
Q 019931 251 MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGG 329 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG 329 (334)
++++|++.+ +..|...|+++|.++|++||+++|+|++|..|.++. |.. ...+. .+|++++|++|++ |..||
T Consensus 165 -~~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~---g~~-~~~~~-~~di~~~S~~K~l~g~~gg 236 (416)
T PRK00011 165 -KPKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA---GVH-PSPVP-HADVVTTTTHKTLRGPRGG 236 (416)
T ss_pred -CCCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhccccc---Ccc-CCCCC-CCcEEEecCCcCCCCCCce
Confidence 567777643 234567899999999999999999999999876543 111 11222 5789999999999 56899
Q ss_pred EEee
Q 019931 330 FIAC 333 (334)
Q Consensus 330 ~i~~ 333 (334)
++++
T Consensus 237 ~i~~ 240 (416)
T PRK00011 237 LILT 240 (416)
T ss_pred EEEe
Confidence 9886
No 159
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.78 E-value=1.1e-17 Score=162.46 Aligned_cols=203 Identities=16% Similarity=0.183 Sum_probs=145.3
Q ss_pred eeEEEeecC-ccCCCC-CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGN-DYLGLS-SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~-~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~ 186 (334)
+.+||-++. -+||.+ .+++++++++++... +.+..+..+++|+++++++|.++++++++|++|+..++.+++
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQN------YFEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVI 81 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHh
Confidence 788996664 467877 578899999887542 234568889999999999999999999999999999999988
Q ss_pred hhhh-hccCCCccCCCCCeEEEEcCCCch----hhHHHHHHhhhcCCcEEEEeeC---CCHHHHHHHHhcCCCCcEEEE-
Q 019931 187 NIAS-LLAGDEKSFKDEKIAIFSDALNHA----SIIDGIRIAERTKMVEVFVYKH---CDMSHLKTLLSCCTMRKKVVV- 257 (334)
Q Consensus 187 ~~~~-~~~~~~~~~~~~gd~Vl~d~~~H~----s~~~g~~ls~~~~g~~v~~~~~---~D~~~Le~~l~~~~~~~~lVv- 257 (334)
.+|+ ++-..-+....+++.|+.....+. +....+.++ |++++.++. .|++++++++++ +|++|+
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~----g~~~v~v~~~~~~d~~~le~ai~~---~t~ai~~ 154 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLG----GGKVVEAGYANECSAEQLEAAITE---KTAAILY 154 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhc----CCeEEEEcCCCCCCHHHHHHhcCh---hceEEEE
Confidence 7632 000000011112345666542222 223444555 788877653 489999999875 667554
Q ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 258 TDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 258 ~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+++++|++|.+.|+++|.++|++||+++++|++|+..+ .... ..++|+++.|++|.+ |..+|+++++
T Consensus 155 v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~-----~~g~D~~~~S~~K~l~gp~~G~l~~~ 222 (363)
T TIGR01437 155 IKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-----QKYY-----RLGADLVIYSGAKAIEGPTSGLVLGK 222 (363)
T ss_pred EecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-----HHHH-----HcCCCEEEEeCCcccCCCceEEEEEc
Confidence 67778899999999999999999999999999997321 1010 124689999999988 4578888753
No 160
>PRK07483 hypothetical protein; Provisional
Probab=99.78 E-value=6e-18 Score=168.48 Aligned_cols=210 Identities=19% Similarity=0.192 Sum_probs=142.4
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.+. ..||. +||+|.+++++.- .....+.... .++...+|.++|+++.. .+++++++||++
T Consensus 24 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~av~~ql~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 101 (443)
T PRK07483 24 LIDATGKRYLDASGGAAVSCLGH-SHPRVIAAIHAQIDRLAYAHTSFF-TTEPAEALADRLVAAAPAGLEHVYFVSGGSE 101 (443)
T ss_pred EEeCCCCEEEEcCccHhhhccCC-CCHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEcCCcHH
Confidence 356888999999874 45777 5899999876542 2211111111 25677899999999874 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc-----CC---cEEEEee----CCC------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT-----KM---VEVFVYK----HCD------ 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-----~g---~~v~~~~----~~D------ 238 (334)
|+.++++....... .. + .+++..+|.....+|+.....+.++... .+ ..+..++ .++
T Consensus 102 Ave~AlklAr~~~~-~~-g---~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 176 (443)
T PRK07483 102 AVEAALKLARQYFV-EI-G---QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGES 176 (443)
T ss_pred HHHHHHHHHHHHHH-hc-C---CCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCC
Confidence 99999996442100 00 0 0124556777889999877666554210 00 0111111 122
Q ss_pred --------HHHHHHHHhc-CCCCcEEEEEcCCCC-CCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc
Q 019931 239 --------MSHLKTLLSC-CTMRKKVVVTDSLFS-MDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA 304 (334)
Q Consensus 239 --------~~~Le~~l~~-~~~~~~lVv~e~v~n-~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~ 304 (334)
++++++++.. ...+..+|++|++.+ ..|.+.| |++|+++|++||++||+||+++ | +|++|.+++
T Consensus 177 ~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-G-fGRtG~~~a 254 (443)
T PRK07483 177 DEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-G-MGRTGTLFA 254 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-C-cccCcHHHH
Confidence 2567776643 224678999999997 4576655 8999999999999999999998 5 799998774
Q ss_pred -cccCCCCCccEEEecCccccc
Q 019931 305 -EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 305 -~~~~~~~~~Div~~SlsKa~G 325 (334)
+++++.| ||+ +|+|++|
T Consensus 255 ~~~~gv~P--Div--~~gK~l~ 272 (443)
T PRK07483 255 CEEDGVAP--DLV--TIAKGLG 272 (443)
T ss_pred HhhcCCCC--Cee--eehhhhc
Confidence 6889887 455 8999996
No 161
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.78 E-value=1.8e-17 Score=162.16 Aligned_cols=198 Identities=14% Similarity=0.173 Sum_probs=142.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~An~ 179 (334)
..++||+.++ ..+..++.+++++++.- .+...+....|. .+|++.+++++ | .+++++++++++|+.
T Consensus 33 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 107 (391)
T PRK08361 33 ENVISLGIGE-PDFDTPKNIKEAAKRALDEGWTHYTPNAGI----PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY 107 (391)
T ss_pred cCeEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH
Confidence 4578998876 45555788888776532 222222223343 45666666654 4 256788888899999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~ 252 (334)
.++.+++.+ ||.|++..+.|..+...+... |.+++.++. .|++++++.+++ +
T Consensus 108 ~~~~~l~~~--------------g~~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~ 166 (391)
T PRK08361 108 LAFESLLEE--------------GDEVIIPDPAFVCYVEDAKIA----EAKPIRIPLREENEFQPDPDELLELITK---R 166 (391)
T ss_pred HHHHHhcCC--------------CCEEEEcCCCCcccHHHHHHc----CCEEEEEecCCccCCCCCHHHHHHhccc---c
Confidence 999888764 788888888888887776665 788887764 367888887764 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++.+++||+|.+.| +++|.++|+++++++|+||+|...++.. ..........++.+|+++||||+||..|
T Consensus 167 ~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl 244 (391)
T PRK08361 167 TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEG--AKHYPMIKYAPDNTILANSFSKTFAMTGW 244 (391)
T ss_pred cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCC--CCCCCHhhcCCCCEEEEecCchhcCCcHh
Confidence 788888899999999999 7889999999999999999998765532 1111111222345789999999999877
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 245 RiG~~~~~ 252 (391)
T PRK08361 245 RLGFVIAP 252 (391)
T ss_pred hhhhhccC
Confidence 888764
No 162
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.7e-17 Score=160.93 Aligned_cols=205 Identities=14% Similarity=0.113 Sum_probs=144.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-C-CCCccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-M-GPRGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~-g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~a 181 (334)
++.++|...+.--+..+|.+.+++.+.- . +..++....|..++.+.+.+.+++++|. +++++++++.+++..+
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~ 118 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLA 118 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence 6677887654211335677777655432 1 2233444566777777788888877773 5678888889999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----------CCHHHHHHHHhcCCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----------CDMSHLKTLLSCCTM 251 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----------~D~~~Le~~l~~~~~ 251 (334)
+.+++.+ ||.|++..+.+......+... |++++.++. .|+++|++++++
T Consensus 119 ~~~l~~~--------------Gd~Vlv~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~--- 177 (405)
T PRK06207 119 VAATVAR--------------GDKVAIVQPDYFANRKLVEFF----EGEMVPVQLDYLSADKRAGLDLDQLEEAFKA--- 177 (405)
T ss_pred HHHhcCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEEeccccCcccCCCcCHHHHHHhhhh---
Confidence 9988764 788888888887776666655 777776653 278888888764
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
++++|++.+++||+|.+.+ +++|+++|++||++||+||+|...++.....-....+....+.-|+++||||+||..|
T Consensus 178 ~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG 257 (405)
T PRK06207 178 GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG 257 (405)
T ss_pred cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc
Confidence 6788999999999999988 6778899999999999999999765532111011111112233489999999998666
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 258 lRiG~ii~~ 266 (405)
T PRK06207 258 YRLGVAFGS 266 (405)
T ss_pred cceEEEEcC
Confidence 888764
No 163
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.78 E-value=6.9e-18 Score=161.91 Aligned_cols=195 Identities=18% Similarity=0.136 Sum_probs=140.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
.++|||+++++ ++..+|.+++++.++...... ++... ..+|++.++++++. +++++++++++++..++.++.
T Consensus 19 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~----y~~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~ 92 (346)
T TIGR01141 19 KEVIKLNSNEN-PFGPPPKAKEALRAEADKLHR----YPDPD-PAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL 92 (346)
T ss_pred CceEEccCCCC-CCCCCHHHHHHHHHhHHHhhc----CCCCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc
Confidence 67999999987 888899999988876422111 12222 27899999999985 346666777788878887776
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ +|.|++..+.+......+... |.+++.++. .|++.+++++. +++++|+++++
T Consensus 93 ~~--------------gd~v~~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p 151 (346)
T TIGR01141 93 EP--------------GDAVLVPPPTYSMYEISAKIH----GAEVVKVPLDEDGQLDLEDILVAID---DKPKLVFLCSP 151 (346)
T ss_pred CC--------------CCEEEEcCCCHHHHHHHHHHc----CCeEEEeccCCCCCCCHHHHHHhcC---CCCCEEEEeCC
Confidence 53 777888777765544444433 788877764 37788887654 36888988999
Q ss_pred CCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+||+|.+.|++++.++|+.+ ++++|+||+|.. +...+... ......+ .+|+++||||.||+.| ||++++
T Consensus 152 ~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~--~~~~~~~~-~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~~~~ 225 (346)
T TIGR01141 152 NNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGE--FSGEPSTL-PLLAEYP-NLIVLRTLSKAFGLAGLRIGYAIAN 225 (346)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhh--hcCCccHH-HHHhhCC-CEEEEehhhHhhhchhhhceeeecC
Confidence 99999999999999999987 999999999984 22211111 1111122 3588999999998777 888764
No 164
>PRK07324 transaminase; Validated
Probab=99.78 E-value=8.7e-18 Score=163.64 Aligned_cols=195 Identities=17% Similarity=0.141 Sum_probs=137.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~An~~ai~a 184 (334)
..+++++-.+. .+..++.+ +++.+ ...+...+....|. .+|++.++++++ .+++++++++++|+..++.+
T Consensus 26 ~~~~~~~~~e~-~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~ 99 (373)
T PRK07324 26 SCIDSLTLEEL-LALAGKNP-EAFYQELGQKKLTYGWIEGS----PEFKEAVASLYQNVKPENILQTNGATGANFLVLYA 99 (373)
T ss_pred CCCCCCcHHHH-HhccCcch-HHHHHHHhcCCccCCCCCCC----HHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHH
Confidence 55666666653 44456656 54432 22222223333343 568888888874 35688888899999999998
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcEEEE
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~lVv 257 (334)
++.+ ||.|++..+.|..+...++.. |++++.++. .|++++++++++ ++++|+
T Consensus 100 l~~~--------------gd~Vl~~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~kli~ 158 (373)
T PRK07324 100 LVEP--------------GDHVISVYPTYQQLYDIPESL----GAEVDYWQLKEENGWLPDLDELRRLVRP---NTKLIC 158 (373)
T ss_pred hCCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEEecccccCCCCCHHHHHHhCCC---CCcEEE
Confidence 8764 788888888888877666665 788887764 267788777653 788999
Q ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEE
Q 019931 258 TDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 258 ~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i 331 (334)
+++++||+|.+.+ +++|+++|++||+++|+||+|....++ +. ........+ ..|+++||||+||..| ||+
T Consensus 159 i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~--~~-~~s~~~~~~-~~I~~~s~SK~~~~~G~RiG~i 234 (373)
T PRK07324 159 INNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED--GS-TPSIADLYE-KGISTNSMSKTYSLPGIRVGWI 234 (373)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC--CC-CCChhhccC-CEEEEecchhhcCCccceeEEE
Confidence 9999999999988 888999999999999999999754333 21 111111222 2488999999999877 898
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 235 ~~~ 237 (373)
T PRK07324 235 AAN 237 (373)
T ss_pred ecC
Confidence 764
No 165
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.78 E-value=1.6e-17 Score=165.83 Aligned_cols=205 Identities=18% Similarity=0.193 Sum_probs=137.8
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~ 175 (334)
.+|.+|++||||.+. ..||. +||+|.+|+++. ..+........ .++...+|.++|+++.+. +++++++||+
T Consensus 48 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~la~~L~~~~p~~~~~~v~f~~sGs 125 (451)
T PRK06918 48 VTDVDGNQYIDFAGAIGTINVGH-SHPKVKEALHKQVDQYIHTGFNVM-MYEPYIELAEKLAALAPGSFDKKVLFLNSGA 125 (451)
T ss_pred EEeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHHhccCcccccc-ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcH
Confidence 357888999999775 34676 599999987543 33221111111 256778999999999863 5788889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC------C---cEEEEeeCCC--------
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK------M---VEVFVYKHCD-------- 238 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~------g---~~v~~~~~~D-------- 238 (334)
+|++++++.... .+++..+|.....+|+.....+.++.... + ..+...+..+
T Consensus 126 eA~e~AlklAr~-----------~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK06918 126 EAVENAVKIARK-----------YTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGL 194 (451)
T ss_pred HHHHHHHHHHHH-----------HhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccC
Confidence 999999996433 23456777788889998766655432100 0 0111111110
Q ss_pred ---------HHHHHHHHhc--CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc
Q 019931 239 ---------MSHLKTLLSC--CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 239 ---------~~~Le~~l~~--~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
.+.+++++.. ...+..+|++|++.+..|.+.| +++|+++|++||++||+||+++. +|++|..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg--~gr~g~~~ 272 (451)
T PRK06918 195 TEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTG--FARTGKYF 272 (451)
T ss_pred chHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--cCccCcee
Confidence 1234554431 1236789999999988887554 88999999999999999999984 56777544
Q ss_pred -ccccCCCCCccEEEecCcccccC
Q 019931 304 -AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 304 -~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
.+++++.| | +.||||+++.
T Consensus 273 a~~~~~v~p--D--i~t~sK~l~~ 292 (451)
T PRK06918 273 AIEHFDVVP--D--LITVSKSLGA 292 (451)
T ss_pred hhHhcCCCC--C--EEeeehhhcC
Confidence 35667666 4 4489999983
No 166
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.78 E-value=3.5e-18 Score=170.21 Aligned_cols=220 Identities=14% Similarity=0.094 Sum_probs=145.0
Q ss_pred hcc-cceeEEEeecC---ccCCCCCCHHHHH--HHHHhcCC-C--CccccccCchHHHHHHHHHHHhHh---CCCcEEEe
Q 019931 104 FAR-QFKRLLLFSGN---DYLGLSSHPTIAK--AAARHGMG-P--RGSALICGYTNYHRLLESCLADLK---KKEDCLLC 171 (334)
Q Consensus 104 ~~~-~g~~~l~f~sn---~yLgl~~~p~v~~--a~~~~g~g-~--~~sr~~~G~~~~~~~LE~~La~~~---g~e~alv~ 171 (334)
+|. +|++||||.+. ..||. +||+|.+ ++++.-.- . ..+. ..-.++...+|.++|+++. +.++++++
T Consensus 39 ~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~ql~~l~~~~~~~-~~~~~~~~~~la~~l~~~~~p~~~~~v~f~ 116 (443)
T PRK08297 39 VDARTGRRYLDMFTFFASSALGM-NHPALADDPEFRAELGRAALNKPSN-SDVYTVEMARFVDTFARVLGDPELPHLFFV 116 (443)
T ss_pred EECCCCCEeeecccCHhhhcCCC-CChHHhhHHHHHHHHHHhhhhcccc-CCcCCHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 563 78999999775 45777 5888888 77543210 0 0111 1112466678889999886 24678888
Q ss_pred ccHHHHHHHHHHHHhhhhh-h-ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---C-cE------E----EEee
Q 019931 172 PTGFAANMAVIVAVGNIAS-L-LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---M-VE------V----FVYK 235 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~-~-~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---g-~~------v----~~~~ 235 (334)
+||++||+++++....... . ...+ .+.+++..+|.....+|+.....+.++.... . .. + ..++
T Consensus 117 ~SGsEAve~AlKlAr~~~~~~~~~~g-~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (443)
T PRK08297 117 DGGALAVENALKVAFDWKSRKNEARG-IDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFP 195 (443)
T ss_pred CchHHHHHHHHHHHHHHhhccccccC-CCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCC
Confidence 9999999999996532100 0 0000 0001234567788889998766665542100 0 00 0 0111
Q ss_pred C-------------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 236 H-------------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 236 ~-------------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
. ++++++++++.+...+...|++|++.++.|.+.| |++|+++|++||++||+||+++ | +|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G-fGR 273 (443)
T PRK08297 196 LPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-G-VGL 273 (443)
T ss_pred CcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCc
Confidence 0 1345566777654457899999999999998754 8999999999999999999998 4 789
Q ss_pred CCccc-ccccCCCCCccEEEecCcccccCCccEEee
Q 019931 299 NGGGV-AEQFNCERDVDICVGTLSKAAGCQGGFIAC 333 (334)
Q Consensus 299 ~G~g~-~~~~~~~~~~Div~~SlsKa~G~~GG~i~~ 333 (334)
+|.++ .+++++.| ||+ +|+|+++ .||++++
T Consensus 274 tG~~~a~~~~gv~P--Div--~~gK~l~-~~a~l~~ 304 (443)
T PRK08297 274 TGTAWAYQQLGVRP--DIV--AFGKKTQ-VCGIMAG 304 (443)
T ss_pred cchHHHHHhcCCCC--CEE--Eeccccc-ccceecc
Confidence 98876 46788877 566 7999996 4666654
No 167
>PRK09148 aminotransferase; Validated
Probab=99.78 E-value=3.2e-17 Score=161.35 Aligned_cols=208 Identities=12% Similarity=0.034 Sum_probs=141.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ 180 (334)
|+.+++|..++ ..+..++.+++++.+.-. . ...+....|..++.+.+.+.+.+.+|. + .+++++++++++..
T Consensus 29 ~~~~i~l~~~~-p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~ 107 (405)
T PRK09148 29 GADIIDLGMGN-PDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFAN 107 (405)
T ss_pred CCCeEEcCCCC-CCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 47889998875 345557888887655321 1 122333345444444444444433342 4 57777888999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEE
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lV 256 (334)
++.+++.+ ||.|++..+.+......+... |++++.++.. ++++++++++...+++++|
T Consensus 108 ~~~~l~~~--------------gd~Vl~~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v 169 (405)
T PRK09148 108 MAQAITAP--------------GDVILCPNPSYPIHAFGFIMA----GGVIRSVPAEPDEEFFPALERAVRHSIPKPIAL 169 (405)
T ss_pred HHHHhcCC--------------CCEEEEcCCCCcccHHHHHhc----CCEEEEEeCCCCCCCccCHHHHHhhccccceEE
Confidence 99888764 788888888877766665555 7888887642 4567777776544578899
Q ss_pred EEcCCCCCCCCccCH---HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cE
Q 019931 257 VTDSLFSMDGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GF 330 (334)
Q Consensus 257 v~e~v~n~~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~ 330 (334)
++++|+||+|.+.+. ++|.++|++||+++|+||+|....++.........+....+..|+++||||+||..| ||
T Consensus 170 ~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~ 249 (405)
T PRK09148 170 IVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGF 249 (405)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheee
Confidence 999999999999885 678899999999999999998755532111111111111234477999999999877 99
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 250 ~v~~ 253 (405)
T PRK09148 250 AVGN 253 (405)
T ss_pred eeCC
Confidence 8864
No 168
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.2e-17 Score=161.79 Aligned_cols=203 Identities=12% Similarity=0.082 Sum_probs=140.6
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-CC-CCccccccCchHHHHHHHHHHHhHhCC-----C-cEEEeccHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MG-PRGSALICGYTNYHRLLESCLADLKKK-----E-DCLLCPTGFAANM 179 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g-~~~sr~~~G~~~~~~~LE~~La~~~g~-----e-~alv~~sG~~An~ 179 (334)
|++++||++++ ..+..+|.+++++.+.. .. ...+. ..|...+.+.+.+.+.+.+|. + .+++++++.+++.
T Consensus 43 ~~~~i~L~~g~-p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~ 120 (410)
T PRK06290 43 DMELIDMGVGE-PDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALA 120 (410)
T ss_pred CCCeEEcCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHH
Confidence 47789999987 46667888888765432 11 12222 245544444444444443342 3 3566666678888
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~ 252 (334)
.++.+++.+ ||.|++..+.+......++.. |++++.++.. |++++++.+.+ +
T Consensus 121 ~~~~~~~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~ 179 (410)
T PRK06290 121 MLPSCFINP--------------GDVTLMTVPGYPVTGTHTKYY----GGEVYNLPLLEENNFLPDLDSIPKDIKE---K 179 (410)
T ss_pred HHHHHhCCC--------------CCEEEEeCCCCccHHHHHHHc----CCEEEEEecCCCcCCcCCHHHHHHhhcc---c
Confidence 888887764 788888888877766666655 7888887742 67777777653 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++++|+||+|.+.+ +++|.++|++||++||+||+|....++.....+....+ ..+.+|+++||||++|+.|
T Consensus 180 ~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~-~~~~~I~i~SfSK~~g~~Gl 258 (410)
T PRK06290 180 AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPG-AKEVGVEIHSLSKAYNMTGW 258 (410)
T ss_pred ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCC-ccccEEEEeechhhcCCchh
Confidence 889998899999999998 57788899999999999999997655422222222111 2345799999999999888
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 259 RiG~ii~~ 266 (410)
T PRK06290 259 RLAFVVGN 266 (410)
T ss_pred heEeEEeC
Confidence 998864
No 169
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.78 E-value=3.4e-17 Score=159.88 Aligned_cols=200 Identities=15% Similarity=0.113 Sum_probs=142.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHh----CC----CcEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLK----KK----EDCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~----g~----e~alv~~sG~~An~ 179 (334)
.+++||..++ ..+..+|.+++++.+.-. +...+....| ..+|++.|++++ |. +++++++++++|+.
T Consensus 31 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 31 RDVISLGAGE-PDFDTPEHIKEAAIEALDDGKTKYTPAAG----IPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred CCEEEeCCCC-CCCCCCHHHHHHHHHHHhcCCCCcCCCCC----hHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 6788999887 467778988887765422 2111222233 355666666665 32 45777888889999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~ 252 (334)
.++.+++++ +|.|++..+.|..+...++.. |.+++.++.+ |++.+++++++ +
T Consensus 106 ~~~~~~~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~ 164 (393)
T PRK05764 106 NAFMALLDP--------------GDEVIIPAPYWVSYPEMVKLA----GGVPVFVPTGEENGFKLTVEQLEAAITP---K 164 (393)
T ss_pred HHHHHhcCC--------------CCEEEecCCCCcchHHHHHHc----CCEEEEEecCcccCCcCCHHHHHHhhCc---c
Confidence 988887764 788888888888877777666 7888888763 56888888753 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
+++|++.+++||+|.+.+ +++|.++|++||+++|+||+|+...++.. .........-..+.+|+++||||.+|..|
T Consensus 165 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 244 (393)
T PRK05764 165 TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTG 244 (393)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCcc
Confidence 788888899999999876 77899999999999999999987655321 11222110111235799999999999777
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 245 ~RiG~i~~~ 253 (393)
T PRK05764 245 WRLGYAAGP 253 (393)
T ss_pred ceeEEEecC
Confidence 888764
No 170
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=1e-17 Score=164.14 Aligned_cols=159 Identities=14% Similarity=0.112 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++||++.|.+.+++++||++|+..++.+++++ ||.|++....|......+.......+
T Consensus 51 ~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~--------------GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKP--------------GDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred CccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCC--------------CCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 3667899999999999989999999999999999888765 77788777777654433221111124
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.++..++..|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|..+... ..
T Consensus 117 i~v~~vd~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~---------~p 184 (386)
T PRK08045 117 YRVLFVDQGDEQALRAALAE---KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ---------NP 184 (386)
T ss_pred eEEEEeCCCCHHHHHHhccc---CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---------Cc
Confidence 56666766788999988864 7899999999999999999999999999999999999999876431 12
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++|+++.|++|.+++ .||++++
T Consensus 185 l~~gaDivv~S~tK~l~G~~d~~~G~vi~ 213 (386)
T PRK08045 185 LALGADLVLHSCTKYLNGHSDVVAGVVIA 213 (386)
T ss_pred hhhCCCEEEeecceeccCCCCceeEEEEe
Confidence 234578999999999975 3466654
No 171
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1e-17 Score=164.39 Aligned_cols=158 Identities=13% Similarity=0.086 Sum_probs=123.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++++++.|.+.+++++||+.|+..++. ++++ ||.|++....|.+....+.......|
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~--------------Gd~Vlv~~~~y~~~~~~~~~~~~~~G 117 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSK--------------GDHVLISEDVYGGTYRMITEVLSRFG 117 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCC--------------CCEEEEccCccchHHHHHHHHHHHcC
Confidence 47779999999999999999999999999887775 4543 67777766666654433221111238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++..|++++++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.... .
T Consensus 118 ~~v~~v~~~d~~~l~~~l~~---~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------~ 185 (390)
T PRK08064 118 IEHTFVDMTNLEEVAQNIKP---NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK---------P 185 (390)
T ss_pred CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC---------c
Confidence 88888888899999888864 78999999999999999999999999999999999999998653211 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|.+++ .+|++++
T Consensus 186 ~~~g~Divv~S~tK~~~G~~~~laG~~v~ 214 (390)
T PRK08064 186 LDLGADVVLHSATKFLAGHSDVLAGLAVV 214 (390)
T ss_pred hhhCCcEEEeecceeccCCccceeEEEEe
Confidence 223579999999999975 3466543
No 172
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.77 E-value=3.5e-18 Score=161.24 Aligned_cols=159 Identities=21% Similarity=0.169 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHhHhCCCcEEE-eccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLL-CPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv-~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
...+.++|+++|+++|.+++++ +++++.+|..++.+++++ ||.|+++++.|.++..++.+.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~--------------gd~Vlv~~~~h~s~~~~~~~~---- 119 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGP--------------GDKILIDRNCHKSVINGLVLS---- 119 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCC--------------CCEEEEeCCchHHHHHHHHHC----
Confidence 3456999999999999988877 566678999999888764 899999999999999998877
Q ss_pred CcEEEEee-----------CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccc-
Q 019931 228 MVEVFVYK-----------HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFV- 295 (334)
Q Consensus 228 g~~v~~~~-----------~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv- 295 (334)
+++++.++ ..|++++++++++.+ ++++|++.++ +++|.+.|+++|.++|+++|+++++|+||+...
T Consensus 120 g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~ 197 (294)
T cd00615 120 GAVPVYLKPERNPYYGIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFR 197 (294)
T ss_pred CCEEEEecCccCcccCcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhc
Confidence 77766553 247899999997532 5677766666 679999999999999999999999999998642
Q ss_pred ccCCCcccccccCCCCCccEEEecCcccccC--CccEE
Q 019931 296 CGKNGGGVAEQFNCERDVDICVGTLSKAAGC--QGGFI 331 (334)
Q Consensus 296 ~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~--~GG~i 331 (334)
+++... ......++|+++.|++|++++ .||++
T Consensus 198 ~~~~~~----~~~~~~~~div~~S~hK~l~g~~~~~~l 231 (294)
T cd00615 198 FHPILP----SSAAMAGADIVVQSTHKTLPALTQGSMI 231 (294)
T ss_pred cCcccC----cchhhcCCcEEEEchhcccchHhHHHHH
Confidence 111111 111124679999999999975 34554
No 173
>PRK07036 hypothetical protein; Provisional
Probab=99.77 E-value=1.6e-17 Score=166.32 Aligned_cols=211 Identities=17% Similarity=0.128 Sum_probs=140.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
+|.+|++||||.+. ..+|.+ ||+|.+|+++. ......+....-.++...+|.++|++... .+.+++++||++|
T Consensus 46 ~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseA 124 (466)
T PRK07036 46 TDADGRRYLDGIGGMWCVNVGYG-REEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTA 124 (466)
T ss_pred EECCCCEEEECcccHHhhcCCCC-CHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHH
Confidence 46788999999875 457774 89999987543 22222222211235677889999999875 3567888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---C-----cEEEEeeCCC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---M-----VEVFVYKHCD----------- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---g-----~~v~~~~~~D----------- 238 (334)
++.+++....... ..+ .+++..+|.....+|+.....+.++.... . ..+..++..+
T Consensus 125 ve~AlklAr~~~~--~~g---~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 199 (466)
T PRK07036 125 VDSALRFVHYYFN--VRG---RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEA 199 (466)
T ss_pred HHHHHHHHHHHHH--hcC---CCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChH
Confidence 9999996432100 000 11245667778889998755444332100 0 0111111111
Q ss_pred ------HHHHHHHHhc-CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc-
Q 019931 239 ------MSHLKTLLSC-CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE- 305 (334)
Q Consensus 239 ------~~~Le~~l~~-~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~- 305 (334)
.+.+++.+.. ...+..+|++|++.+..|.+.| +++|+++|++||++||+||+++ | +|++|..+ ++
T Consensus 200 ~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~t-G-fGRtG~~~~~~~ 277 (466)
T PRK07036 200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVT-G-FGRLGHFFASEA 277 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-C-CCcCchhhhhhh
Confidence 2345666643 2346789999999999998877 9999999999999999999997 4 78888654 34
Q ss_pred ccCCCCCccEEEecCcccccC
Q 019931 306 QFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++.| ||+ +|+|++|.
T Consensus 278 ~~gv~P--Div--t~gK~l~g 294 (466)
T PRK07036 278 VFGIQP--DII--TFAKGLTS 294 (466)
T ss_pred hcCCCC--CEE--EEcccccc
Confidence 689887 555 89999963
No 174
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.77 E-value=2.9e-17 Score=158.21 Aligned_cols=187 Identities=16% Similarity=0.191 Sum_probs=138.0
Q ss_pred CCHHHHHHHHHhc---CCCCccccc-cC--chHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCC
Q 019931 124 SHPTIAKAAARHG---MGPRGSALI-CG--YTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGD 195 (334)
Q Consensus 124 ~~p~v~~a~~~~g---~g~~~sr~~-~G--~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~ 195 (334)
.++.+++++.+|- .+..+++.. .+ ....++++++++++++|.+ .+++++++++++..++.++..++.
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----- 84 (353)
T TIGR03235 10 IDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE----- 84 (353)
T ss_pred CCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc-----
Confidence 4788888776552 233332221 11 1356789999999999974 455557778899988888764310
Q ss_pred CccCCCCC-eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc
Q 019931 196 EKSFKDEK-IAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA 269 (334)
Q Consensus 196 ~~~~~~~g-d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~ 269 (334)
.++ +.|+++...|.++...+..... .|.+++.++. .|+++|++++++ ++++|++++++|++|.+.
T Consensus 85 -----~~g~~~vi~~~~~~~s~~~~~~~~~~-~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 85 -----QKGKKHIITSAIEHPAVLEPIRALER-NGFTVTYLPVDESGRIDVDELADAIRP---DTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred -----cCCCCeeeEcccccHHHHHHHHHHHh-cCCEEEEEccCCCCcCCHHHHHHhCCC---CCEEEEEEcccCCceecc
Confidence 123 7899999999998877765432 3778877764 378899988864 689999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEee
Q 019931 270 PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 270 pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
|+++|.++|+++|+++++|++|+.|... +++. .++|+++.|++|.+|+.| |++..
T Consensus 156 ~~~~I~~l~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~g~l~~ 212 (353)
T TIGR03235 156 PIREIAEVLEAHEAFFHVDAAQVVGKIT---------VDLSADRIDLISCSGHKIYGPKGIGALVI 212 (353)
T ss_pred CHHHHHHHHHHcCCEEEEEchhhcCCcc---------ccccccCCCEEEeehhhcCCCCceEEEEE
Confidence 9999999999999999999999987541 2222 468999999999988765 66543
No 175
>PRK07777 aminotransferase; Validated
Probab=99.77 E-value=5.1e-17 Score=158.60 Aligned_cols=203 Identities=12% Similarity=0.094 Sum_probs=139.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai 182 (334)
.+++||..+. .....++.+.+++.+. ......+....|...+.+.+.+.+.+.+|. + +++++++|++|+..++
T Consensus 24 ~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 102 (387)
T PRK07777 24 TGAVNLGQGF-PDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAV 102 (387)
T ss_pred CCeEEccCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 3568988876 4555667777765542 222223333345444444455544444563 2 5778888899999888
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCCCcE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~ 254 (334)
.+++.+ ||.|++..+.|......+... +.+++.++. .|+++|++++++ +++
T Consensus 103 ~~~~~~--------------gd~vli~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~ 161 (387)
T PRK07777 103 LGLVEP--------------GDEVLLIEPYYDSYAAVIAMA----GAHRVPVPLVPDGRGFALDLDALRAAVTP---RTR 161 (387)
T ss_pred HHhcCC--------------CCEEEEeCCCchhhHHHHHHC----CCEEEEeecCCccCCCcCCHHHHHHhcCc---ccE
Confidence 887654 777888888887777666665 677666653 367788877753 678
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccC-CCcccccccCCCCCccEEEecCcccccCCc--
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGK-NGGGVAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~-~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
+|++++++||+|.+.+ +++|+++|++|++++|+||+|....+.. ....+....+ ..+.+|+++||||+||..|
T Consensus 162 ~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~GlR 240 (387)
T PRK07777 162 ALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG-MRERTVTISSAAKTFNVTGWK 240 (387)
T ss_pred EEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC-CcCcEEEEeechhhccCcCce
Confidence 8889999999998865 7889999999999999999998665522 1112222111 1345799999999999777
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 241 iG~~~~~ 247 (387)
T PRK07777 241 IGWACGP 247 (387)
T ss_pred eEEEecC
Confidence 888764
No 176
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.77 E-value=4.5e-17 Score=157.03 Aligned_cols=202 Identities=16% Similarity=0.141 Sum_probs=141.3
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC----CC-cEEEeccHHHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK----KE-DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e-~alv~~sG~~An~~ai~al 185 (334)
+++|++++ ..+...|.+++++++.......+.-..|...+.+.+.+.+.+..| .+ ++++++++.+|+..++.++
T Consensus 2 ~~~~~~g~-p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 2 LFDFGTGD-PKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred eEeccCCC-CCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 56888876 457778889998876532222233334443444444444443335 23 5777777788998888888
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEEEEE
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lVv~ 258 (334)
++++ +++|.|++..+.+......++.. |++++.++.+ |++++++++++ ++++|++
T Consensus 81 ~~~g-----------~~~d~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i 142 (350)
T TIGR03537 81 IDPE-----------EDRRRVIFGTPGYPVYERGALFA----GGEPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWI 142 (350)
T ss_pred cCCC-----------CCCceEEEcCCCCcchHHHHHhc----CCEEEEcccCcccCCccCHHHHHHhhhh---ccEEEEE
Confidence 7651 12478888888888887777766 8888877642 67888888764 6788888
Q ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEe
Q 019931 259 DSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 259 e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
.+++||+|.+.| +++|.++|++||+++|+||+|+...++....... ....+..|++.||||++|..| ||++
T Consensus 143 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 143 NYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL---EVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh---hcCcCCEEEEeecccccCCccccceeee
Confidence 899999999988 8889999999999999999998655543221111 112233588999999998776 8887
Q ss_pred eC
Q 019931 333 CR 334 (334)
Q Consensus 333 ~~ 334 (334)
++
T Consensus 220 ~~ 221 (350)
T TIGR03537 220 GD 221 (350)
T ss_pred cC
Confidence 64
No 177
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.77 E-value=4.9e-17 Score=158.54 Aligned_cols=203 Identities=15% Similarity=0.120 Sum_probs=137.4
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCC--CCccccccCchHHHHHHHHHHHhHhCC----Cc-EEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMG--PRGSALICGYTNYHRLLESCLADLKKK----ED-CLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g--~~~sr~~~G~~~~~~~LE~~La~~~g~----e~-alv~~sG~~An~~ 180 (334)
|.++++|++++ ..+..+|.+++++.++-.. ...+....|...+.+.+.+.+.+.+|. ++ +++++++++++..
T Consensus 30 ~~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~ 108 (385)
T PRK09276 30 GVDVISLGIGD-PDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAH 108 (385)
T ss_pred CCCEEEecCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence 36789999986 3566678888877664321 122333344444444444444433342 33 5555677788888
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++.+ ||.|++..+.+......++.. |.+++.++.. |++++++.+. .++
T Consensus 109 ~~~~~~~~--------------gd~Vl~~~P~y~~~~~~~~~~----g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~ 167 (385)
T PRK09276 109 IPLAFVNP--------------GDVVLVPDPGYPVYKIGTIFA----GGEPYFMPLKEENGFLPDLDAIPEDVA---KKA 167 (385)
T ss_pred HHHHhCCC--------------CCEEEEcCCCCcChHHHHHHc----CCEEEEEecCCCCCCcCCHHHHHHhcc---ccc
Confidence 88887764 788888888877776666665 7888877642 4666666554 368
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEecCcccccCCc
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~SlsKa~G~~G 328 (334)
++|++++++||+|.+.+ +++|+++|++|++++|+||+|....++ +........+ ..+..|+++||||.||+.|
T Consensus 168 ~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 168 KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYD--GYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecC--CCCCCChhccCCCcCCEEEEecchhhcCCcc
Confidence 89988899999999988 578889999999999999999876553 2111111111 1234588999999999888
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 246 lRiG~~i~~ 254 (385)
T PRK09276 246 WRIGFAVGN 254 (385)
T ss_pred hhheeeeCC
Confidence 998864
No 178
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.77 E-value=1.3e-17 Score=160.92 Aligned_cols=193 Identities=15% Similarity=0.107 Sum_probs=134.6
Q ss_pred eeEEEeecCc-cCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccH-HHHHHHHHHH
Q 019931 109 KRLLLFSGND-YLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTG-FAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn~-yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG-~~An~~ai~a 184 (334)
++++||++|+ +++ .+|.+++++.++-.....+ +. +.+.+|+++++++++.+ ..+++++| .+++..++.+
T Consensus 34 ~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~y----~~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~ 106 (361)
T PRK00950 34 ESIIKLGSNENPLG--PSPKAVEAIEKELSKIHRY----PE-PDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMRT 106 (361)
T ss_pred cceEEccCCCCCCC--CCHHHHHHHHHHHHhhcCC----CC-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHH
Confidence 6899999985 555 5788888776543221111 11 22488999999999863 45564556 4566677776
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEc
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e 259 (334)
++++ ||.|+++.+.+......++.. |.+++.++. .|++++++.++. ++++|+++
T Consensus 107 ~~~~--------------gd~vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~~~ 165 (361)
T PRK00950 107 FIDP--------------GDEVIIPTPTFSYYEISAKAH----GAKPVYAKREEDFSLDVDSVLNAITE---KTKVIFLC 165 (361)
T ss_pred hcCC--------------CCEEEEcCCChHHHHHHHHHc----CCEEEEeecCCCCCcCHHHHHHHhcc---CCCEEEEe
Confidence 6553 777887777666555555544 788877752 267788877753 67888888
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+++||+|.+.|+++|.++|+++|+++|+||+|... .+.....+.. ..+..++++||||+||..| ||++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~-~~~~~~~~~~----~~~~vi~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEF-AEYDYTPLAL----EYDNLIIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhh-CccchHHHHH----hcCCEEEEEeehHhhcCchhhcchhcCC
Confidence 99999999999999999999999999999999743 2221111111 1122488899999999877 888764
No 179
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.77 E-value=4.1e-17 Score=159.33 Aligned_cols=204 Identities=18% Similarity=0.110 Sum_probs=136.3
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhC----CC-cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKK----KE-DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g----~e-~alv~~sG~~An~~ 180 (334)
|+++++|+.|+ ..+..+|.+++++.+... . ...+....|...+.+++.+.+.+..| .+ .+++++++.+|+..
T Consensus 29 ~~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~ 107 (388)
T PRK07366 29 GKELIDLSLGS-SDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH 107 (388)
T ss_pred CCCeEEeCCCC-CCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHH
Confidence 47889999886 357678888887765422 1 12222234443443334433333324 23 36666777889998
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++.+ ||.|++..+.+......++.. |++++.++.. |++++++.+. .++
T Consensus 108 ~~~~l~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~ 166 (388)
T PRK07366 108 LPLAVLNP--------------GDFALLLDPGYPSHAGGVYLA----GGQIYPMPLRAENDFLPVFADIPTEVL---AQA 166 (388)
T ss_pred HHHHhCCC--------------CCEEEEcCCCCcchHHHHHhc----CCEEEEEECCCccCCCCCHHHHHHhhc---ccc
Confidence 88888765 788888888887777776666 7888887643 3445555443 267
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-c-ccccccCCCCCccEEEecCcccccCCc
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-G-GVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~-g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
++|++.+++||+|.+.+ +++|+++|++||++||+||+|...++...- . .+.. .....+..|+++||||+||..|
T Consensus 167 k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~-~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 167 RLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQ-ADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhh-CCCCcccEEEEeecccccCCcc
Confidence 88888899999999888 556788999999999999999976553210 1 1111 1111123478899999998776
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 246 lRiG~~v~~ 254 (388)
T PRK07366 246 FRIGFAIGN 254 (388)
T ss_pred hhheehcCC
Confidence 888764
No 180
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.77 E-value=2e-17 Score=163.97 Aligned_cols=211 Identities=15% Similarity=0.141 Sum_probs=143.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~ 176 (334)
++.+|++||||.++ ..||. +||+|.+++.+.. ..........+ ++...+|.++|++..+. +++++++||++
T Consensus 36 ~d~dG~~~lD~~~g~~~~~lGh-~~~~i~~a~~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~~~~~~~~~~f~~sGse 113 (425)
T PRK08088 36 WDVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLA-YEPYLELCEKMNQKVPGDFAKKTLLVTTGSE 113 (425)
T ss_pred EeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHhhCCCccccccC-CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHH
Confidence 45778999999874 34677 4899998775432 22111111122 34456899999998763 56788899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC-----------CcEEEEee--CCC-----
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK-----------MVEVFVYK--HCD----- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~-----------g~~v~~~~--~~D----- 238 (334)
|+..+++.+.. .+++.++|.....+|+.......+..... +.....++ .++
T Consensus 114 a~e~Alklar~-----------~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 182 (425)
T PRK08088 114 AVENAVKIARA-----------ATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDD 182 (425)
T ss_pred HHHHHHHHHHH-----------HhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHH
Confidence 99999987543 12457788888899998766655542100 01111122 121
Q ss_pred -HHHHHHHHhc--CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCC
Q 019931 239 -MSHLKTLLSC--CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCE 310 (334)
Q Consensus 239 -~~~Le~~l~~--~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~ 310 (334)
+++|+++++. ...+.++|++|+++++.|.+.| +++|+++|++||++||+||+|+ | +|++|.+. .+++++.
T Consensus 183 ~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g-~g~~g~~~~~~~~~~~ 260 (425)
T PRK08088 183 AIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-G-AGRTGTLFAMEQMGVA 260 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCcchhHHhhcCCC
Confidence 5678888862 2246789999999999998776 8999999999999999999999 4 67777654 3455554
Q ss_pred CCccEEEecCcccccC--CccEEee
Q 019931 311 RDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 311 ~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
+ | ++||||+++. .-|++++
T Consensus 261 p--d--i~s~sK~l~~G~rig~v~~ 281 (425)
T PRK08088 261 A--D--LTTFAKSIAGGFPLAGVTG 281 (425)
T ss_pred C--C--EEEEeccccCCCcceeeEe
Confidence 4 4 5799999973 1255665
No 181
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=9.5e-18 Score=161.97 Aligned_cols=198 Identities=17% Similarity=0.104 Sum_probs=140.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
.++++|++|++. +..+|.+++++.+.-... .+ .......+|++.++++++. +++++++++++++..++.+++
T Consensus 29 ~~~i~l~~n~~~-~~~~~~v~~a~~~~~~~~-~~----~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 102 (359)
T PRK03158 29 EKIVKLASNENP-YGPSPKVKEAIAAHLDEL-AL----YPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL 102 (359)
T ss_pred CceEEecCCCCC-CCCCHHHHHHHHHHHHHh-hc----CCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh
Confidence 478999999754 667899998776532111 00 0112347789999999985 356777777888888887776
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
++ ||.|++..+.+......+... |.+++.++.. |++++++.+++ ++++|++++++
T Consensus 103 ~~--------------gd~v~~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~i~~p~ 161 (359)
T PRK03158 103 NP--------------GTNTVMAEPTFSQYRHNAIIE----GAEVREVPLKDGGHDLEAMLKAIDE---QTKIVWICNPN 161 (359)
T ss_pred CC--------------CCEEEEcCCCHHHHHHHHHHc----CCeEEEEecCCCCcCHHHHHHhcCC---CCCEEEEeCCC
Confidence 64 788888877776666555554 7788777643 67777776643 67888889999
Q ss_pred CCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
||+|.+.|.++|.++++. +|+++|+||+|....++..........+. .+..|+++||||+||..| ||++++
T Consensus 162 NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 162 NPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEK-YENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHh-cCCEEEEEechHhhcCcchhhehhcCC
Confidence 999999999999999887 59999999999875543211111111111 123588999999999877 898764
No 182
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.77 E-value=5.9e-17 Score=158.55 Aligned_cols=203 Identities=14% Similarity=0.085 Sum_probs=144.1
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhc-CC-CCccccccCchHHHHHHHHHHHhHhCC----Cc-EEEeccHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHG-MG-PRGSALICGYTNYHRLLESCLADLKKK----ED-CLLCPTGFAANMAVI 182 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g-~~~sr~~~G~~~~~~~LE~~La~~~g~----e~-alv~~sG~~An~~ai 182 (334)
..+++..++. .+..++.+++|++++- .. ...+....|..+..+.+++.+++++|. ++ +++++++.+++..++
T Consensus 28 ~~~~l~~g~~-~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 28 GTISLGQGVV-SYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CeEEccCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 4577777653 3656788888887652 22 234555677788889999999998884 33 455566677888888
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv 257 (334)
.+++.+ ||.|++..+.+......++.. |.+++.++.+ |+++|++++++ ++++|+
T Consensus 107 ~~~~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~---~~klv~ 165 (389)
T PRK05957 107 LAITDP--------------GDEIILNTPYYFNHEMAITMA----GCQPILVPTDDNYQLQPEAIEQAITP---KTRAIV 165 (389)
T ss_pred HHhcCC--------------CCEEEEeCCCCcCHHHHHHhc----CCEEEEeecCCCCCcCHHHHHHhcCc---CceEEE
Confidence 777654 777887777766655544444 7887777542 78888888754 688888
Q ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEE
Q 019931 258 TDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 258 ~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i 331 (334)
+.+++||+|.+.| +++|+++|++||++||+||+|....++....-......-.....|++.||||.+|..| ||+
T Consensus 166 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 245 (389)
T PRK05957 166 TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYM 245 (389)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEE
Confidence 9999999999888 8889999999999999999998665542111111111011223488999999999888 888
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 246 ~~~ 248 (389)
T PRK05957 246 VIP 248 (389)
T ss_pred ecC
Confidence 763
No 183
>PRK07682 hypothetical protein; Validated
Probab=99.77 E-value=4.2e-17 Score=158.67 Aligned_cols=203 Identities=12% Similarity=0.105 Sum_probs=140.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai 182 (334)
+..++|..++ ..+..++.+++++.+. ..+...+....|...+.+++.+.+.+.+|. + ++++++++++|+..++
T Consensus 20 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 98 (378)
T PRK07682 20 EGVISLGVGE-PDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAM 98 (378)
T ss_pred CCeEEeCCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH
Confidence 3578888876 3455567777766443 222222222345544544555555444342 3 5777788899999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~l 255 (334)
.+++++ ||.|++..+.|..+...+... +.+++.++. .|+++|++++.+ ++++
T Consensus 99 ~~l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~ 157 (378)
T PRK07682 99 RAIINP--------------GDEVLIVEPSFVSYAPLVTLA----GGVPVPVATTLENEFKVQPAQIEAAITA---KTKA 157 (378)
T ss_pred HHhCCC--------------CCEEEEeCCCchhhHHHHHHc----CCEEEEeecCCccCCCCCHHHHHhhcCc---ccEE
Confidence 888764 788888888887776666655 677777653 267888887754 6788
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
|++.+++||+|.+.+ +++|+++|++|++++|+||+|...+++.....+....+.. +..|+++||||+||..| |
T Consensus 158 v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G 236 (378)
T PRK07682 158 ILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMR-ERTILISGFSKGFAMTGWRLG 236 (378)
T ss_pred EEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhccccc-CCEEEEecCcccccChhhhhh
Confidence 888899999999876 7889999999999999999999766643222222222222 34599999999999878 8
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 237 ~~~~~ 241 (378)
T PRK07682 237 FIAAP 241 (378)
T ss_pred hhhcC
Confidence 88764
No 184
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.77 E-value=2.4e-17 Score=160.93 Aligned_cols=198 Identities=18% Similarity=0.168 Sum_probs=138.3
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCcccc-----ccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHH-HHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSAL-----ICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAA-NMAV 181 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~-----~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~A-n~~a 181 (334)
.+++++.++ +|+.+++.+.+++.+. .+...+.. ..|..++++++++++++++|.+ .++++++|+++ +.++
T Consensus 21 ~~~~l~~g~-~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~ 98 (398)
T cd00613 21 SMSFLGSGT-YKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAG 98 (398)
T ss_pred Ccccccccc-cCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHH
Confidence 345666665 6887666555556665 22222222 4667788899999999999976 67777766654 4444
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lV 256 (334)
+.++..+ +++|.|++...+|++....+.+.....+++++.++++ |+++|++.+.+ ++++|
T Consensus 99 ~~~~~~~------------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~t~~v 163 (398)
T cd00613 99 LAAIRAY------------HKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSE---EVAAL 163 (398)
T ss_pred HHHHhcc------------cCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCC---CeEEE
Confidence 4444432 1478899999999998888877632334788877764 67888887753 68888
Q ss_pred EEcCCCCCCCCccCH-HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC------Ccc
Q 019931 257 VTDSLFSMDGDFAPM-VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC------QGG 329 (334)
Q Consensus 257 v~e~v~n~~G~~~pL-~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~------~GG 329 (334)
++++++ ++|.+.|+ ++|+++|++||++||+|++|+.+. +....+ ..++|++++|++|.+++ .+|
T Consensus 164 iv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~-------~~~~d~~~~s~~K~~~p~g~Ggp~~g 234 (398)
T cd00613 164 MVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPG-------EYGADIVVGNLQKTGVPHGGGGPGAG 234 (398)
T ss_pred EEECCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc-CCCChH-------HcCCCEEEeeccccCCCCCCCCCcee
Confidence 888875 78999885 999999999999999999997643 110001 12478999999999832 346
Q ss_pred EEee
Q 019931 330 FIAC 333 (334)
Q Consensus 330 ~i~~ 333 (334)
|++.
T Consensus 235 ~l~~ 238 (398)
T cd00613 235 FFAV 238 (398)
T ss_pred EEEE
Confidence 7654
No 185
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=2.5e-17 Score=164.70 Aligned_cols=204 Identities=18% Similarity=0.163 Sum_probs=139.0
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCC----cEEEe-ccH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKE----DCLLC-PTG 174 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e----~alv~-~sG 174 (334)
+|.+|++||||.++ ..||. +||+|.+|+++.- .+....... -.++...+|.++|++..+.. ..++| +||
T Consensus 53 ~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SG 130 (459)
T PRK06931 53 TDVEGNQYLDCLAGAGTLALGH-NHPDVLQSIQDVLTSGLPLHTLD-LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSG 130 (459)
T ss_pred EeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhhccccccc-cCCHHHHHHHHHHHHhCCCccccceEEEeCCCc
Confidence 56788999999886 34676 5899999886543 222111111 13577788999999987532 34455 899
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCC---------
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHC--------- 237 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~--------- 237 (334)
++|+.++++.... .+++..+|.....+|+.....+.++.... ...+..++.+
T Consensus 131 sEAve~AlklAr~-----------~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK06931 131 ADAVEAAIKLAKT-----------YTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGI 199 (459)
T ss_pred HHHHHHHHHHHHH-----------hcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 9999999996443 23456677788889998766665442100 0112222221
Q ss_pred ----CHHHH----HHHHhc---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc
Q 019931 238 ----DMSHL----KTLLSC---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 238 ----D~~~L----e~~l~~---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g 302 (334)
+.+.+ ++.+.+ ...+...|++|++.+..|.+.| |++|+++|++||++||+||+++. +|++|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tG--fGRtG~~ 277 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG--FARTGKM 277 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhc--CCcCchH
Confidence 22333 333332 1235789999999998887655 89999999999999999999984 7899987
Q ss_pred c-ccccCCCCCccEEEecCcccccC
Q 019931 303 V-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 303 ~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+ .+++++.|| |+ |++|++|.
T Consensus 278 ~a~~~~gv~PD--iv--t~gK~l~g 298 (459)
T PRK06931 278 FAFEHAGIEPD--II--VMSKAVGG 298 (459)
T ss_pred HHhhhcCCCCC--EE--EecccccC
Confidence 6 468898874 55 89999974
No 186
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.77 E-value=6e-17 Score=158.16 Aligned_cols=203 Identities=13% Similarity=0.164 Sum_probs=140.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHH-HHhcCCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAA-ARHGMGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~-~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~ 183 (334)
..++||+.++ ..+..+|.+++++ .........+....|...+.+.+.+.+.+..| .+++++++++++|+..++.
T Consensus 29 ~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 107 (384)
T PRK06348 29 PDIIDLSLGD-PDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQ 107 (384)
T ss_pred CCcEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHH
Confidence 3578998876 3566678887744 33333323333344443443444444433223 3567888999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~lV 256 (334)
+++.+ ||.|+++.+.+......+... +++++.++. .|+++|++++++ ++++|
T Consensus 108 ~~~~~--------------gd~vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v 166 (384)
T PRK06348 108 SILDP--------------GDEVIIHEPYFTPYKDQIEMV----GGKPIILETYEEDGFQINVKKLEALITS---KTKAI 166 (384)
T ss_pred HhcCC--------------CCEEEEeCCCCcchHHHHHHc----CCEEEEecCCcCcCCcCCHHHHHHhhCc---CccEE
Confidence 88764 788888888888887777766 777777652 367888888754 67888
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cE
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GF 330 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~ 330 (334)
++.+++||+|.+.+ +++|.++|++||++||+||+|...+++.....+....+. ++..|+++||||++|..| ||
T Consensus 167 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~l~GlRiG~ 245 (384)
T PRK06348 167 ILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGM-PERTITFGSFSKDFAMTGWRIGY 245 (384)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCC-cCcEEEEecchhccCCcccccee
Confidence 88899999999887 677888999999999999999976554321121111111 234589999999998766 89
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 246 ~v~~ 249 (384)
T PRK06348 246 VIAP 249 (384)
T ss_pred eecC
Confidence 8764
No 187
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.77 E-value=1.5e-17 Score=161.69 Aligned_cols=156 Identities=13% Similarity=0.082 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++.|.+++++++||++|+..++. ++++ ||.|++....+......+.......+
T Consensus 53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~--------------GD~VI~~~~~yg~~~~~~~~~~~~~~ 117 (364)
T PRK07269 53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPV--------------GSKVVAVRDLYGGSFRWFNQQEKEGR 117 (364)
T ss_pred CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCC--------------CCEEEEecCCcCchHHHHHHHHhcCc
Confidence 36679999999999999999999999999999884 4554 66666555444444333332211112
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
..+. + ..|++++++++++ +|++|++++|.||+|.+.|+++|+++|+++|+++|+|+++..+.++ ..
T Consensus 118 ~~~~-~-~~d~~~l~~~i~~---~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~---------~p 183 (364)
T PRK07269 118 FHFT-Y-ANTEEELIAAIEE---DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ---------RP 183 (364)
T ss_pred EEEE-e-cCCHHHHHHhcCc---CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---------Cc
Confidence 2211 2 3589999998864 7899999999999999999999999999999999999998765432 12
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+...+||++.|++|.+++ .||+|++
T Consensus 184 l~~gaDivv~S~tK~l~g~~d~~gG~v~~ 212 (364)
T PRK07269 184 IELGADIVLHSATKYLSGHNDVLAGVVVT 212 (364)
T ss_pred hhhCCcEEEecCceeccCCCcccceEEEe
Confidence 334679999999999975 5788775
No 188
>PRK02948 cysteine desulfurase; Provisional
Probab=99.76 E-value=3.6e-17 Score=159.17 Aligned_cols=187 Identities=18% Similarity=0.155 Sum_probs=135.2
Q ss_pred CCHHHHHHHHHhcC---CCCccccccC--chHHHHHHHHHHHhHhCCC-c-EEEeccHHHHHHHHHHHHhhhhhhccCCC
Q 019931 124 SHPTIAKAAARHGM---GPRGSALICG--YTNYHRLLESCLADLKKKE-D-CLLCPTGFAANMAVIVAVGNIASLLAGDE 196 (334)
Q Consensus 124 ~~p~v~~a~~~~g~---g~~~sr~~~G--~~~~~~~LE~~La~~~g~e-~-alv~~sG~~An~~ai~al~~~~~~~~~~~ 196 (334)
.++.+++++.++.. +..++....| ....++++++.+++++|.+ + +++++++++++..++.++...
T Consensus 12 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~-------- 83 (381)
T PRK02948 12 MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNA-------- 83 (381)
T ss_pred CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--------
Confidence 46778887755432 1111111111 1356789999999999853 3 445567799999988887642
Q ss_pred ccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH
Q 019931 197 KSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM 271 (334)
Q Consensus 197 ~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL 271 (334)
...+++.|+++...|++....++.... .|.+++.++. .|+++|++++++ ++++|++++++|++|.+.|+
T Consensus 84 --~~~~g~~vv~~~~~h~s~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~lv~~~~~~n~tG~~~~~ 157 (381)
T PRK02948 84 --LPQNKKHIITTPMEHASIHSYFQSLES-QGYTVTEIPVDKSGLIRLVDLERAITP---DTVLASIQHANSEIGTIQPI 157 (381)
T ss_pred --ccCCCCEEEECCcccHHHHHHHHHHHh-CCCEEEEEeeCCCCCCCHHHHHHhcCC---CCEEEEEECCcCCcEeehhH
Confidence 001378899999999998777665432 3677776653 478899888864 68899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEe
Q 019931 272 VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 272 ~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
++|.++|+++|+++++|++|++|...- .+ . ..++|+++.|++|.+|+.| |++.
T Consensus 158 ~~I~~l~~~~~~~vivD~~~~~g~~~~---~~-~----~~~~d~~~~s~~K~~gp~G~G~l~ 211 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTFGKLPI---DV-F----EMGIDSLSVSAHKIYGPKGVGAVY 211 (381)
T ss_pred HHHHHHHHHcCCEEEEEChhhcccccc---Cc-c----cCCCCEEEecHHhcCCCCcEEEEE
Confidence 999999999999999999998764321 11 1 1357999999999999776 6654
No 189
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.76 E-value=9.5e-18 Score=164.27 Aligned_cols=210 Identities=18% Similarity=0.125 Sum_probs=146.3
Q ss_pred hhcccceeEEEeec---CccCCCCCCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHH
Q 019931 103 TFARQFKRLLLFSG---NDYLGLSSHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~ 175 (334)
..+.+||+|||-.| +...|. +||+|.+|+.+ ...-........-+.+ ..+|.++|+++.+ .+++++.+||+
T Consensus 38 l~d~~G~r~lDg~sg~W~~~~Gh-~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGS 115 (449)
T COG0161 38 LTDIDGRRYLDGMSGLWCVNHGH-GRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGS 115 (449)
T ss_pred EEeCCCCEEEecccHHHHhhcCc-CCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhCCCCCccEEEEeCCch
Confidence 45678899999555 355777 58999997754 3332222222222334 7999999999998 56788889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC---------cEEEEe--eC--------
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM---------VEVFVY--KH-------- 236 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g---------~~v~~~--~~-------- 236 (334)
+|+..+++....-. ...+ +|. +..+|--...+|++++.++.+...... ..+... ++
T Consensus 116 eAvEtAlKma~qY~--~~~G-~p~--r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~ 190 (449)
T COG0161 116 EAVETALKMALQYW--RARG-QPQ--RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFG 190 (449)
T ss_pred HHHHHHHHHHHHHH--HhcC-CCc--ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCC
Confidence 99999999765431 1111 111 233555667899988877665521000 001111 11
Q ss_pred -------CCHHHHHHHHhcCC-CCcEEEEEcCCCCC-CCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc
Q 019931 237 -------CDMSHLKTLLSCCT-MRKKVVVTDSLFSM-DGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 237 -------~D~~~Le~~l~~~~-~~~~lVv~e~v~n~-~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
...++||+++.+.. .+...+++|++..- .|.+.| |++++++|++||++||+||+-+ | +||+|..+
T Consensus 191 ~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~t-G-FGRTG~~F 268 (449)
T COG0161 191 EGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVAT-G-FGRTGKMF 268 (449)
T ss_pred CChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeeccee-C-CCcCchhh
Confidence 12567888887765 46678999999987 676655 9999999999999999999988 4 89999988
Q ss_pred -ccccCCCCCccEEEecCccccc
Q 019931 304 -AEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 304 -~~~~~~~~~~Div~~SlsKa~G 325 (334)
++++++.|| |+ |++|++.
T Consensus 269 A~e~~gi~PD--i~--~~aKGLT 287 (449)
T COG0161 269 ACEHAGIVPD--IL--CLAKGLT 287 (449)
T ss_pred hhhhcCCCCC--ee--eeccccc
Confidence 589999885 55 8999995
No 190
>PRK08912 hypothetical protein; Provisional
Probab=99.76 E-value=8.4e-17 Score=157.10 Aligned_cols=203 Identities=14% Similarity=0.113 Sum_probs=141.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC----CC-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK----KE-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e-~alv~~sG~~An~~ai 182 (334)
...+||++++ ..+..+|.+.+++.+. ..+...+....|...+.+.+.+.+.+.+| .+ ++++++++++|+..++
T Consensus 26 ~~~i~l~~g~-p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 104 (387)
T PRK08912 26 HGAINLGQGF-PDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAAL 104 (387)
T ss_pred CCeEEccCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHH
Confidence 4568998876 3455578887765442 22333344445554554555555544444 23 5777888899998888
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lV 256 (334)
.+++.+ ||.|++..+.|......++.. |++++.++.. |+++|++.+.. ++++|
T Consensus 105 ~~~~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v 163 (387)
T PRK08912 105 LALVEP--------------GDEVVLFQPLYDAYLPLIRRA----GGVPRLVRLEPPHWRLPRAALAAAFSP---RTKAV 163 (387)
T ss_pred HHhcCC--------------CCEEEEeCCCchhhHHHHHHc----CCEEEEEecCcccCcCCHHHHHHHhCc---cceEE
Confidence 887764 788888888888877777665 7887766542 67888887753 67888
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
++.+++||+|.+.+ +++|.++|++|++++|+||+|...+++.. ...+....+. .+.+|+++||||.||..| |
T Consensus 164 ~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK08912 164 LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM-RERTVKIGSAGKIFSLTGWKVG 242 (387)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc-cCceEEEeechhhccCcCceeE
Confidence 88899999999887 66789999999999999999987655421 1122222122 234699999999999877 9
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 243 ~~~~~ 247 (387)
T PRK08912 243 FVCAA 247 (387)
T ss_pred EEecC
Confidence 98764
No 191
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.76 E-value=4.6e-17 Score=165.19 Aligned_cols=200 Identities=13% Similarity=0.131 Sum_probs=143.4
Q ss_pred ccceeEEEeecC--ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh------C--CCcEEEeccHH
Q 019931 106 RQFKRLLLFSGN--DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK------K--KEDCLLCPTGF 175 (334)
Q Consensus 106 ~~g~~~l~f~sn--~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~------g--~e~alv~~sG~ 175 (334)
..|+.+++|+.. +.+++..++.+++++.+.-.....+....|. .+|++.|++++ + .++++++++++
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~----~~lReaia~~~~~~~~~~~~~~~I~it~G~~ 218 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGL----FSARKAIMQYAQLKGLPNVDVDDIYTGNGVS 218 (517)
T ss_pred HcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcCh----HHHHHHHHHHHHhcCCCCCChhHEEEeCcHH
Confidence 356889999884 4568888999999775532222233333443 45566666655 2 24577778888
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~ 248 (334)
+++..++.+++.+ ||.|++..+.+......+.+. |++++.++. .|+++|++++.+
T Consensus 219 eal~~~~~~l~~~--------------Gd~Vli~~P~y~~y~~~~~~~----g~~~v~~~~~~~~~~~~d~~~l~~~~~~ 280 (517)
T PRK13355 219 ELINLSMSALLDD--------------GDEVLIPSPDYPLWTACVNLA----GGTAVHYRCDEQSEWYPDIDDIRSKITS 280 (517)
T ss_pred HHHHHHHHHhCCC--------------CCEEEEcCCCCcCHHHHHHHC----CCEEEEeecCcccCCCCCHHHHHHhcCc
Confidence 9999999888764 788888888888777777666 788877753 277888887754
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCc-cEEEecCccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDV-DICVGTLSKA 323 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~-Div~~SlsKa 323 (334)
++++|++.+|+||+|.+.+ +++|+++|++|+++||+||+|...++.... ..+.. +.++. -|.++||||+
T Consensus 281 ---~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~---~~~~~~vi~~~S~SK~ 354 (517)
T PRK13355 281 ---RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIAS---LAPDLFCVTFSGLSKS 354 (517)
T ss_pred ---CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHH---hCCCCeEEEEecchhh
Confidence 7899988999999999988 888999999999999999999865553211 11111 12332 2556999999
Q ss_pred ccCCc---cEEee
Q 019931 324 AGCQG---GFIAC 333 (334)
Q Consensus 324 ~G~~G---G~i~~ 333 (334)
|++.| ||+++
T Consensus 355 ~~~~G~RiG~~i~ 367 (517)
T PRK13355 355 HMIAGYRIGWMIL 367 (517)
T ss_pred ccCcccceEEEEe
Confidence 98877 88873
No 192
>PRK10534 L-threonine aldolase; Provisional
Probab=99.76 E-value=9.5e-18 Score=160.25 Aligned_cols=196 Identities=15% Similarity=0.170 Sum_probs=134.4
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhh
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIAS 190 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~ 190 (334)
+|||+||..-+ -+|.+++++.+.-.+. ..+|..+.+.+||++|++++|.+.++++++|++++..++.+++.+
T Consensus 1 ~~~~~~~~~~~--p~~~~~~a~~~~~~~~----~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~-- 72 (333)
T PRK10534 1 MIDLRSDTVTR--PSRAMLEAMMAAPVGD----DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCER-- 72 (333)
T ss_pred CcccccccCCC--CCHHHHHHHHhccCCC----cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCC--
Confidence 47899998777 5799999887643332 234456788999999999999999999999999999988877654
Q ss_pred hccCCCccCCCCCeEEEEcCCCchhhHHH--HHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCC---CCcEEEEEcC
Q 019931 191 LLAGDEKSFKDEKIAIFSDALNHASIIDG--IRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCT---MRKKVVVTDS 260 (334)
Q Consensus 191 ~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g--~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~---~~~~lVv~e~ 260 (334)
||.|+++.+.|...... ..... +++++.++. .|+++|++++.+.. .++++|++++
T Consensus 73 ------------gd~vi~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n 137 (333)
T PRK10534 73 ------------GEEYIVGQAAHNYLYEAGGAAVLG---SIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLEN 137 (333)
T ss_pred ------------CCeeEEechhhhhHhcCCchHHhc---CceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEec
Confidence 67777777777543321 22221 355555543 27888888875310 1478888887
Q ss_pred CCCCCCCccCHH---HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 261 LFSMDGDFAPMV---ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~---~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
++ +|.+.|.+ +|.++|++|+++|++||||.++.....+... ..+....|.++.||||++|+ .|||++++
T Consensus 138 p~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~---~~~~~~~~~~~~s~SK~~~~~~G~~~~~~ 210 (333)
T PRK10534 138 TH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCEL---KEITQYCDSFTICLSKGLGTPVGSLLVGN 210 (333)
T ss_pred CC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCH---HHHHhcCCEEEEEeEcCCCCcccceEEcC
Confidence 65 59998865 4567899999999999998753221111111 11112235566799999997 57778764
No 193
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.76 E-value=5.7e-17 Score=161.47 Aligned_cols=202 Identities=17% Similarity=0.172 Sum_probs=139.2
Q ss_pred eeEEEeecC---ccCCCCC-CHHHHHHHHHhcCCCCc--cccccC-chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGN---DYLGLSS-HPTIAKAAARHGMGPRG--SALICG-YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn---~yLgl~~-~p~v~~a~~~~g~g~~~--sr~~~G-~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
|+++|-... +.+|.+. ++.+++++.++....+. +.+..| ....++.+|+++++++|++.+++|+||++|+..+
T Consensus 74 r~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~ 153 (454)
T TIGR00474 74 RRVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLA 153 (454)
T ss_pred cceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 566664442 3356654 78888877654332211 111111 1345689999999999999999999999999888
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCch------hhHHHHHHhhhcCCcEEEEeeC---CCHHHHHHHHhcCCCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA------SIIDGIRIAERTKMVEVFVYKH---CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~------s~~~g~~ls~~~~g~~v~~~~~---~D~~~Le~~l~~~~~~ 252 (334)
+.++ .+ ||.|++.+..|. ++.+.++.. |++++.+++ .|++++++++++ +
T Consensus 154 l~~l-~~--------------GdeVIvs~~e~v~~ggs~~i~~~~~~~----G~~~~~v~~~~~~~l~dle~aI~~---~ 211 (454)
T TIGR00474 154 LNTL-AK--------------GKEVIVSRGELVEIGGSFRIPDVMEQS----GAKLVEVGTTNRTHLKDYEDAITE---N 211 (454)
T ss_pred HHHh-CC--------------cCEEEECCChhhhhcchhhHHHHHHHc----CCEEEEeCCCCCCCHHHHHHhcCc---C
Confidence 8654 32 566666554432 233333333 899999987 467888888764 7
Q ss_pred cEEEEEcCCCCC--CC--CccCHHHHHHHHHHcCCEEEEecCcccccccCCCc-ccccc----cCCCCCccEEEecCccc
Q 019931 253 KKVVVTDSLFSM--DG--DFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGG-GVAEQ----FNCERDVDICVGTLSKA 323 (334)
Q Consensus 253 ~~lVv~e~v~n~--~G--~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~-g~~~~----~~~~~~~Div~~SlsKa 323 (334)
|++|+.++++|+ +| .+.|+++|+++|++||+++++|. +.|++++.+. |+... .....++|++++|.+|.
T Consensus 212 T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~--~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~ 289 (454)
T TIGR00474 212 TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDL--GSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKL 289 (454)
T ss_pred CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEEC--CCcccccchhccCCCCcccccHhHcCCCEEEecCccc
Confidence 899888888875 56 58999999999999999999996 4566655432 22110 11235789999999999
Q ss_pred cc-CCccEEeeC
Q 019931 324 AG-CQGGFIACR 334 (334)
Q Consensus 324 ~G-~~GG~i~~~ 334 (334)
+| ..||+++++
T Consensus 290 LgGp~~G~i~g~ 301 (454)
T TIGR00474 290 LGGPQAGIIVGK 301 (454)
T ss_pred cCCCeEEEEEEC
Confidence 96 468998874
No 194
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=6.6e-17 Score=153.40 Aligned_cols=195 Identities=18% Similarity=0.155 Sum_probs=134.2
Q ss_pred EeecCccCCCCCCHHHHHHHHH--hcCCCCccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHHHHHHHHH
Q 019931 113 LFSGNDYLGLSSHPTIAKAAAR--HGMGPRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~~--~g~g~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~~An~~ai 182 (334)
||++++| .+..+|.++.+..+ +......+....|. .++++.++++++ .+.++++++|++|+..++
T Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 2 DLSIGEP-DFPPPPEVLEALAAAALRAGLLGYYPDPGL----PELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHhhccCCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 6777775 66677777775554 33333333333444 455555555554 335777889999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC-----H--HHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD-----M--SHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D-----~--~~Le~~l~~~~~~~~l 255 (334)
.++..+ ++.|+++...|.++...++.. +.+++.++.++ . +.++.+. .+++++
T Consensus 77 ~~~~~~--------------g~~vl~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~ 135 (350)
T cd00609 77 RALLNP--------------GDEVLVPDPTYPGYEAAARLA----GAEVVPVPLDEEGGFLLDLELLEAAK---TPKTKL 135 (350)
T ss_pred HHhCCC--------------CCEEEEcCCCchhHHHHHHHC----CCEEEEEecccccCCccCHHHHHhhc---CccceE
Confidence 887653 788999999999988887766 77777777642 1 3344333 247888
Q ss_pred EEEcCCCCCCCCccCHHHH---HHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 256 VVTDSLFSMDGDFAPMVEL---VKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L---~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
|++++++|++|.+.|++++ .++|+++|+++|+|++|+.+.++......... ....+.|++++|++|.++..| |
T Consensus 136 v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~K~~~~~g~~~G 214 (350)
T cd00609 136 LYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALAL-LDAYERVIVLRSFSKTFGLPGLRIG 214 (350)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccC-cCccCcEEEEeecccccCCcccceE
Confidence 8888899999999986554 58999999999999999977654333221111 113456899999999997433 7
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
+++++
T Consensus 215 ~i~~~ 219 (350)
T cd00609 215 YLIAP 219 (350)
T ss_pred EEecC
Confidence 87753
No 195
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.76 E-value=2e-17 Score=162.02 Aligned_cols=194 Identities=20% Similarity=0.218 Sum_probs=135.7
Q ss_pred eeEEE-eecCccCCCCCCHHHHHHHH-----HhcCCCCccccccCchHHHHHHH----HHHHhHhCCCcE-EEeccHHHH
Q 019931 109 KRLLL-FSGNDYLGLSSHPTIAKAAA-----RHGMGPRGSALICGYTNYHRLLE----SCLADLKKKEDC-LLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~-f~sn~yLgl~~~p~v~~a~~-----~~g~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~a-lv~~sG~~A 177 (334)
++.|| +++++|+ +|.|++++. +|+.|.++++.+.|. +...++| +.+++++|.+.+ ++++||++|
T Consensus 19 ~~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASENFT----SPAVMEAMGSDLTNKYAEGYPGKRYYGGC-EYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccCCcC----CHHHHHHhcccccccccCCCCCCcccCCc-hHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 45666 5777886 899999774 456677777777664 3334444 356789998776 445789999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHH-----HHHhhhcCCcEEEE--eeCC------CHHHHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDG-----IRIAERTKMVEVFV--YKHC------DMSHLKT 244 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g-----~~ls~~~~g~~v~~--~~~~------D~~~Le~ 244 (334)
+..++.+++++ ||.|+++.+.|.+.... +... |.++.. ++++ |++++++
T Consensus 94 ~~~~l~~l~~~--------------Gd~Vl~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~id~~~l~~ 155 (402)
T cd00378 94 NLAVYFALLEP--------------GDTIMGLDLSHGGHLTHGSFTKVSAS----GKLFESVPYGVDPETGLIDYDALEK 155 (402)
T ss_pred HHHHHHHhcCC--------------CCEEEEecCccCcccccccccccccc----ceeEEEecCCcCcccCCcCHHHHHH
Confidence 99999998764 78888888887654322 2222 444333 3333 8999999
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~ 324 (334)
++.+ .++++|++.++.+ |...|+++|.++|++||+++|+|++|..|.++. | .. ...+. .+|++++|+||+|
T Consensus 156 ~i~~--~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~-g--~~-~~~~~-~~dv~~~s~sK~l 226 (402)
T cd00378 156 MALE--FKPKLIVAGASAY--PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAG-G--VF-PNPLP-GADVVTTTTHKTL 226 (402)
T ss_pred HHHh--CCCCEEEecCccc--CCCcCHHHHHHHHHhcCCEEEEEccchhhhhhc-c--cC-CCccc-CCcEEEeccccCC
Confidence 8864 2567777655543 557799999999999999999999997775532 2 11 11122 4689999999999
Q ss_pred -cCCccEEeeC
Q 019931 325 -GCQGGFIACR 334 (334)
Q Consensus 325 -G~~GG~i~~~ 334 (334)
|..||+++++
T Consensus 227 ~G~~gg~i~~~ 237 (402)
T cd00378 227 RGPRGGLILTR 237 (402)
T ss_pred CCCCceEEEec
Confidence 6688988763
No 196
>PRK08068 transaminase; Reviewed
Probab=99.76 E-value=9e-17 Score=157.09 Aligned_cols=199 Identities=17% Similarity=0.142 Sum_probs=137.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHh----CC----C-cEEEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLK----KK----E-DCLLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~----g~----e-~alv~~sG~~A 177 (334)
+.+++|+.++. ++..+|.+++++.+.-. . ...+....|. .+|++++++++ |. + ++++++++.++
T Consensus 32 ~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 32 HDVINLGQGNP-DQPTPEHIVEALQEAAENPANHKYSPFRGY----PFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 67899999864 56667888887655321 1 1122223444 44555555554 42 3 46777888888
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~ 250 (334)
+..++.+++.+ ||.|++..+.+......++.. |++++.++.+ |++++++.+.+
T Consensus 107 l~~~~~~~~~~--------------gd~vlv~~P~y~~~~~~~~~~----g~~~~~i~~~~~~~~~~d~~~l~~~~~~-- 166 (389)
T PRK08068 107 LVELPQCLMNP--------------GDTILVPDPGYPDYLSGVALA----RAQFETMPLIAENNFLPDYTKIPEEVAE-- 166 (389)
T ss_pred HHHHHHHhCCC--------------CCEEEEcCCCCcchHHHHHhc----CCEEEEeecccccCCCCCHHHHHHhccc--
Confidence 88888887764 788898888888877777666 8888887753 45667666643
Q ss_pred CCcEEEEEcCCCCCCCCccCH---HHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEecCcccccC
Q 019931 251 MRKKVVVTDSLFSMDGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++.+|+||+|.+.+. ++|+++|++|++++|+||+|....+.... ..+....+. .+..|++.||||+||.
T Consensus 167 -~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~-~~~~i~~~S~SK~~g~ 244 (389)
T PRK08068 167 -KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA-KDVGIELYTLSKTFNM 244 (389)
T ss_pred -cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc-cCCEEEEecchhccCC
Confidence 67898888999999999884 67888999999999999999753332111 011111111 2235889999999998
Q ss_pred Cc---cEEeeC
Q 019931 327 QG---GFIACR 334 (334)
Q Consensus 327 ~G---G~i~~~ 334 (334)
.| ||++++
T Consensus 245 ~GlRiG~~~~~ 255 (389)
T PRK08068 245 AGWRVAFAVGN 255 (389)
T ss_pred ccceeEeEecC
Confidence 88 998764
No 197
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.76 E-value=1.2e-16 Score=156.33 Aligned_cols=200 Identities=17% Similarity=0.140 Sum_probs=140.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHh----CC-----CcEEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLK----KK-----EDCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~----g~-----e~alv~~sG~~An 178 (334)
..+|+|+.++ ..+..++.+.+++.+.-. +...+....|. .+|++.+++++ +. +++++++++++|+
T Consensus 30 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al 104 (391)
T PRK07309 30 PGILKLTLGE-PDFTTPDHVKEAAKRAIDANQSHYTGMAGL----LELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (391)
T ss_pred CCeEEcCCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 4588998876 345667878887765422 22222233444 44555555554 32 3578888889999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~ 252 (334)
..++.+++.+ ||.|++..+.|......++.. |.+++.++. .|++.|++++++..++
T Consensus 105 ~~~~~~~~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 166 (391)
T PRK07309 105 SASLTAILEP--------------GDKVLLPAPAYPGYEPIVNLV----GAEIVEIDTTENDFVLTPEMLEKAILEQGDK 166 (391)
T ss_pred HHHHHHhcCC--------------CCEEEEeCCCCcchHHHHHHc----CCEEEEEecCCcCCcCCHHHHHHHhhccCCC
Confidence 9999887754 788888878777776666655 788887764 2678899888654336
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccc-cCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVC-GKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
+++|++.+++||+|.+.+ +++|+++|++|++++|+||+|....+ +........ ..++..|+++||||+||..|
T Consensus 167 ~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~---~~~~~~i~~~S~SK~~g~~G 243 (391)
T PRK07309 167 LKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE---YLPDQTILINGLSKSHAMTG 243 (391)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH---hccCCEEEEecChhhccCcc
Confidence 788888889999998776 78899999999999999999997655 211112211 12233589999999999877
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 244 lRvG~~v~~ 252 (391)
T PRK07309 244 WRIGLIFAP 252 (391)
T ss_pred ceeEEEEeC
Confidence 898864
No 198
>PRK08960 hypothetical protein; Provisional
Probab=99.76 E-value=1.1e-16 Score=156.42 Aligned_cols=196 Identities=14% Similarity=0.140 Sum_probs=138.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~An~ 179 (334)
.++++|..++ .++..++.+++++.++-. +...+....|. .+|++.+++++ | .+++++++++++|+.
T Consensus 32 ~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 106 (387)
T PRK08960 32 HDVIHLEIGE-PDFTTAEPIVAAGQAALAAGHTRYTAARGL----PALREAIAGFYAQRYGVDVDPERILVTPGGSGALL 106 (387)
T ss_pred CCeEEeCCCC-CCCCCCHHHHHHHHHHHhcCCCccCCCCCC----HHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence 6788988876 466668889887765422 22222223444 44555566654 3 356778888899999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~ 252 (334)
.++.+++.+ ||.|++..+.|......+... +.+++.++. .|++++++++++ +
T Consensus 107 ~~~~~~~~~--------------gd~vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~ 165 (387)
T PRK08960 107 LASSLLVDP--------------GKHWLLADPGYPCNRHFLRLV----EGAAQLVPVGPDSRYQLTPALVERHWNA---D 165 (387)
T ss_pred HHHHHhcCC--------------CCEEEEcCCCCcchHHHHHhc----CCeEEEEecCcccCCCCCHHHHHHHhCc---c
Confidence 999888764 788998889888877777666 667766653 257788887764 5
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++.+++||+|.+.+ +++|+++|++||+++|+||+|....++...... ....++ .|+++||||+||..|
T Consensus 166 ~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~---~~~~~~-vi~~~S~SK~~g~~Gl 241 (387)
T PRK08960 166 TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASV---LEVDDD-AFVLNSFSKYFGMTGW 241 (387)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCh---hhccCC-EEEEeecccccCCccc
Confidence 778888889999999988 456777899999999999999864443211111 222233 488999999999776
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 242 RiG~~~~~ 249 (387)
T PRK08960 242 RLGWLVAP 249 (387)
T ss_pred EEEEEEcC
Confidence 888764
No 199
>PRK07049 methionine gamma-lyase; Validated
Probab=99.76 E-value=3.6e-17 Score=162.20 Aligned_cols=163 Identities=14% Similarity=0.095 Sum_probs=124.4
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+..||++||++.|.+.+++++||++|+..++.+++++ ||.|+++...+..+...+.......|
T Consensus 82 ~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~--------------Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 82 HPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRP--------------GDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCC--------------CCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 3566899999999999999999999999999999988875 77788777766655443321111227
Q ss_pred cEEEEee-CCCHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCccCHHHHHHHHHH------cCCEEEEecCcccccccCC
Q 019931 229 VEVFVYK-HCDMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDFAPMVELVKLRRK------YGFLLVLDDAHGTFVCGKN 299 (334)
Q Consensus 229 ~~v~~~~-~~D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k------~ga~LivDeAh~~Gv~G~~ 299 (334)
.+++.+. ..|++++++.+.+. ++++++|++++++||+|.+.|+++|.+++++ +++++|+||++...+.
T Consensus 148 i~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~--- 224 (427)
T PRK07049 148 VGAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF--- 224 (427)
T ss_pred cEEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc---
Confidence 7766654 45888888877532 2368999999999999999999999999988 8999999999764322
Q ss_pred CcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 300 GGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 300 G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
..++..++||++.||||++|+ .+||++++
T Consensus 225 ------~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~ 257 (427)
T PRK07049 225 ------QKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGR 257 (427)
T ss_pred ------CCccccCCCEEEEcCceeecCCCCcEEEEEECC
Confidence 112233568999999999985 45777753
No 200
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=8.5e-17 Score=158.21 Aligned_cols=187 Identities=19% Similarity=0.184 Sum_probs=138.1
Q ss_pred CCHHHHHHHHHh----cC--CCCccccccCchHHHHHHHHHHHhHhCCC--cEEEe-ccHHHHHHHHHHHHhhhhhhccC
Q 019931 124 SHPTIAKAAARH----GM--GPRGSALICGYTNYHRLLESCLADLKKKE--DCLLC-PTGFAANMAVIVAVGNIASLLAG 194 (334)
Q Consensus 124 ~~p~v~~a~~~~----g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~-~sG~~An~~ai~al~~~~~~~~~ 194 (334)
.+..|.+++.+| .. +.+.+....-.+...++.++++++|+|++ +.++| .+.++|+..+..++... +
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~---~-- 108 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRS---L-- 108 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhh---h--
Confidence 477788877643 22 22233333323567799999999999976 44555 55567777777766421 0
Q ss_pred CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc
Q 019931 195 DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA 269 (334)
Q Consensus 195 ~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~ 269 (334)
.+||.|++....|.+.+-.++......|++++.++.+ |++++++++.+ +|++|.+.+++|.+|.+.
T Consensus 109 ------~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~---~Tklvais~vSn~tG~~~ 179 (405)
T COG0520 109 ------KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP---KTKLVALSHVSNVTGTVN 179 (405)
T ss_pred ------cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC---CceEEEEECccccccccc
Confidence 1478899889999887766665544448888888743 67888887764 899999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcc-cccCCc-cEEee
Q 019931 270 PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSK-AAGCQG-GFIAC 333 (334)
Q Consensus 270 pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsK-a~G~~G-G~i~~ 333 (334)
|+++|.++||++|++++||.+|+.|.+ ..++. -++|+++.|.+| -+|+.| |++.+
T Consensus 180 pv~~I~~la~~~ga~v~VDaaq~~~h~---------~idv~~l~~Df~afsgHKwl~gP~GiGvLy~ 237 (405)
T COG0520 180 PVKEIAELAHEHGALVLVDAAQAAGHL---------PIDVQELGCDFLAFSGHKWLLGPTGIGVLYV 237 (405)
T ss_pred hHHHHHHHHHHcCCEEEEECccccCcc---------CCCchhcCCCEEEEcccccccCCCceEEEEE
Confidence 999999999999999999999998743 12332 578999999999 667767 77654
No 201
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.75 E-value=1.2e-16 Score=156.54 Aligned_cols=200 Identities=17% Similarity=0.141 Sum_probs=135.8
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHH-HhcCC-CCccccccCchHHHHHHHHHHHhHh----C----CCc-EEEeccHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAA-RHGMG-PRGSALICGYTNYHRLLESCLADLK----K----KED-CLLCPTGFA 176 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~-~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~-alv~~sG~~ 176 (334)
|+++++|..++. ....++.+.+++. +.... ...+....|. .+|++++++++ | .+. +++++++++
T Consensus 34 g~~~i~l~~g~p-~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 34 GLDLIDLGMGNP-DGAAPQPVIEAAIAALADPQNHGYPPFEGT----ASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCCCccCCCCCCC----HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 367899988753 4445666666543 33211 1222223343 34555555554 4 233 566777888
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCC 249 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~ 249 (334)
|+..++.+++.+ ||.|++..+.+......+... |.+++.++. .|++++++.+.+
T Consensus 109 al~~~~~~~~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~~~~- 169 (394)
T PRK05942 109 GLTHLALAYVNP--------------GDVVLVPSPAYPAHFRGPLIA----GAQIYPIILKPENDWLIDLSSIPEEVAQ- 169 (394)
T ss_pred HHHHHHHHhCCC--------------CCEEEEcCCCCcchHHHHHHc----CCEEEEeecCCccCCccCHHHHHHhccc-
Confidence 998888887764 788888888887776665555 788877754 267788777753
Q ss_pred CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCccccc
Q 019931 250 TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
++++|++.+++||+|.+.+ +++|.++|++||+++|+||+|....+... ...+....+ .++..|+++||||+||
T Consensus 170 --~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~SfSK~~~ 246 (394)
T PRK05942 170 --QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG-AKDIGVEFHTLSKTYN 246 (394)
T ss_pred --cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC-ccccEEEEecchhccC
Confidence 7899998899999999988 77889999999999999999987654211 111111111 1334588999999999
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 247 ~~GlRiG~i~~~ 258 (394)
T PRK05942 247 MAGWRVGFVVGN 258 (394)
T ss_pred ChhhheeeeecC
Confidence 877 898764
No 202
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.75 E-value=7.7e-17 Score=156.08 Aligned_cols=186 Identities=16% Similarity=0.134 Sum_probs=134.9
Q ss_pred CHHHHHHHHHhc----CC--CCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHHhhhhhhccCC
Q 019931 125 HPTIAKAAARHG----MG--PRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAVGNIASLLAGD 195 (334)
Q Consensus 125 ~p~v~~a~~~~g----~g--~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al~~~~~~~~~~ 195 (334)
++.+.++++++- .. ++.++..........++++.+++++|.+ .+++++++++++..++.++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~------- 84 (373)
T cd06453 12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRA------- 84 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhc-------
Confidence 577777776542 11 1111112223456788999999999976 5677788899999988887651
Q ss_pred CccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC
Q 019931 196 EKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP 270 (334)
Q Consensus 196 ~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p 270 (334)
..+++.|++....|.+............+++++.++.+ |+++|++++.+ ++++|++.+++|++|.+.|
T Consensus 85 ----~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~~~tG~~~~ 157 (373)
T cd06453 85 ----NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE---RTKLVAVTHVSNVLGTINP 157 (373)
T ss_pred ----CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC---CceEEEEeCcccccCCcCC
Confidence 01377788888899886544332211227788777653 78899998865 6889999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEEee
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
+++|.++|+++|++|++|++|+.|... +.+ ..++|++++|++|.+++.| |++++
T Consensus 158 ~~~i~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~g~g~~~~ 213 (373)
T cd06453 158 VKEIGEIAHEAGVPVLVDGAQSAGHMP---------VDVQDLGCDFLAFSGHKMLGPTGIGVLYG 213 (373)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCcee---------eeccccCCCEEEeccccccCCCCcEEEEE
Confidence 999999999999999999999876431 111 2357899999999998765 77765
No 203
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.75 E-value=5.7e-17 Score=158.37 Aligned_cols=188 Identities=16% Similarity=0.118 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHhc----CCCCc-cccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCC
Q 019931 124 SHPTIAKAAARHG----MGPRG-SALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDE 196 (334)
Q Consensus 124 ~~p~v~~a~~~~g----~g~~~-sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~ 196 (334)
.++.+++++.++- ....+ +....+....++++++.+++++|.+ .+++.+++++++..++.++...
T Consensus 29 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~-------- 100 (397)
T TIGR01976 29 IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRR-------- 100 (397)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhc--------
Confidence 4678888765532 22211 2222233466789999999999964 3555577777777666665321
Q ss_pred ccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC
Q 019931 197 KSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP 270 (334)
Q Consensus 197 ~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p 270 (334)
.++||.|++....|.+....+.......|++++.++.+ |++++++++++ ++++|++++++|++|.+.|
T Consensus 101 ---~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~---~~~lv~i~~~~n~tG~~~~ 174 (397)
T TIGR01976 101 ---WGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP---RTRLVAVTAASNTLGSIVD 174 (397)
T ss_pred ---CCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC---CceEEEEeCCCCCCCccCC
Confidence 02478899999999887655422111227887776542 68888888864 6899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCccEEeeC
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
+++|.++|+++|+++++|++|..|.. . ..+. .++|++++|++|.+|...|+++++
T Consensus 175 ~~~i~~~~~~~~~~~ivD~a~~~~~~------~---~~~~~~~~d~~~~s~~K~~g~~~G~l~~~ 230 (397)
T TIGR01976 175 LAAITELVHAAGALVVVDAVHYAPHG------L---IDVQATGADFLTCSAYKFFGPHMGILWGR 230 (397)
T ss_pred HHHHHHHHHHcCCEEEEehhhhcccc------C---CCHHHcCCCEEEEechhhcCCceEEEEEc
Confidence 99999999999999999999975421 1 1121 357899999999999877887753
No 204
>PRK06917 hypothetical protein; Provisional
Probab=99.75 E-value=2.3e-17 Score=164.53 Aligned_cols=210 Identities=15% Similarity=0.137 Sum_probs=141.7
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~ 176 (334)
.+|.+|++||||.++ ..||. +||+|.+|+++. ......+.... .++...+|.++|++++.. +.+++++||++
T Consensus 25 l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~v~f~~sGsE 102 (447)
T PRK06917 25 LYDQNGNKYFDGSSGAVTAGIGH-GVKEIADAIKEQAEEVSFVYRSQF-TSEPAEKLAKKLSDLSPGDLNWSFFVNSGSE 102 (447)
T ss_pred EEeCCCCEEEECchhHHhccCCC-CCHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCChHH
Confidence 356788999999875 34677 489999987543 32221111111 246668899999998853 46777899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----------CcEEEEeeC----------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----------MVEVFVYKH---------- 236 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----------g~~v~~~~~---------- 236 (334)
|++++++....... .+..+++..+|.....+|+.....+.++.... +.....++.
T Consensus 103 Ave~AlklAr~~~~-----~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 177 (447)
T PRK06917 103 ANETAMKIAIQHFQ-----ERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVY 177 (447)
T ss_pred HHHHHHHHHHHHHH-----hcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCCh
Confidence 99999996532100 00012345667778889988766655442100 001111110
Q ss_pred -----CCHHHHHHHHhcCC-CCcEEEEEcCCCCC-CCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-
Q 019931 237 -----CDMSHLKTLLSCCT-MRKKVVVTDSLFSM-DGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA- 304 (334)
Q Consensus 237 -----~D~~~Le~~l~~~~-~~~~lVv~e~v~n~-~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~- 304 (334)
++.+.+++++++.. .+...|++|++... .|.+.| +++|+++|++||++||+||+++ | +|++|.+++
T Consensus 178 ~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-G-fGRtG~~~a~ 255 (447)
T PRK06917 178 PTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-G-LGRTGAMFAM 255 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-C-cCcccchhhH
Confidence 13467788887543 35789999999874 455544 8999999999999999999998 6 899998874
Q ss_pred cccCCCCCccEEEecCccccc
Q 019931 305 EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G 325 (334)
+++++.|| |+ +|+|++|
T Consensus 256 ~~~gv~PD--i~--~~gK~l~ 272 (447)
T PRK06917 256 EHWGVEPD--IM--TLGKGLG 272 (447)
T ss_pred HhcCCCCC--EE--Eeeehhc
Confidence 68898874 54 8999996
No 205
>PRK06148 hypothetical protein; Provisional
Probab=99.75 E-value=2.3e-17 Score=178.56 Aligned_cols=203 Identities=18% Similarity=0.146 Sum_probs=143.3
Q ss_pred hhcccceeEEEeecCc-cCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHH
Q 019931 103 TFARQFKRLLLFSGND-YLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAAN 178 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~-yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An 178 (334)
.+|.+|++||||.++. .||. +||+|.+|+++. ......+++ .++...+|.++|++.... +.+++++||++||
T Consensus 618 l~D~dG~~ylD~~~g~~~lGH-~hp~v~~Ai~~q~~~l~~~~~~---~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~ 693 (1013)
T PRK06148 618 LIDNRGRAYLDCFNNVCHVGH-AHPRVVAAAARQAARLNTNTRY---LHDAIVAYAERLTATLPDGLTVAFFVNSGSEAN 693 (1013)
T ss_pred EEECCCCEEEEcccChhhcCC-CCHHHHHHHHHHHhhcCCcCCc---CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHH
Confidence 5689999999998872 3454 599999987543 332222222 256778899999998753 6688889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---C---C--cEEE--------EeeCC--CH-
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---K---M--VEVF--------VYKHC--DM- 239 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~---g--~~v~--------~~~~~--D~- 239 (334)
.++++.... .+++..+|..+..+|+.....+.++... . + ..+. +.+.+ |.
T Consensus 694 e~AlklAr~-----------~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 762 (1013)
T PRK06148 694 SLALRLARA-----------HTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAE 762 (1013)
T ss_pred HHHHHHHHH-----------hcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhh
Confidence 999996443 2456778888999998865544433100 0 0 1111 11122 21
Q ss_pred ------HHHHHHHhc---CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCc-cc-c
Q 019931 240 ------SHLKTLLSC---CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG-GV-A 304 (334)
Q Consensus 240 ------~~Le~~l~~---~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~-g~-~ 304 (334)
+.++++++. ...+...|++|++.+..|.+.| |++|+++|++||+++|+||+++. +|++|. ++ .
T Consensus 763 ~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtG--fGRtG~~~~a~ 840 (1013)
T PRK06148 763 HGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVG--FGRVGSHWWAF 840 (1013)
T ss_pred hHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccC--CCCCCCcchhh
Confidence 456666642 2246789999999999898776 99999999999999999999984 788886 33 5
Q ss_pred cccCCCCCccEEEecCcccccC
Q 019931 305 EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+++++.| ||+ ||+|++|.
T Consensus 841 e~~gv~P--Div--t~gK~lgg 858 (1013)
T PRK06148 841 ETQGVVP--DIV--TMGKPIGN 858 (1013)
T ss_pred hhcCCCc--cee--eecccccC
Confidence 7889987 454 89999973
No 206
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.75 E-value=1.2e-16 Score=158.52 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=142.2
Q ss_pred ceeEEEeecCcc--C-CCCCCHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccH
Q 019931 108 FKRLLLFSGNDY--L-GLSSHPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTG 174 (334)
Q Consensus 108 g~~~l~f~sn~y--L-gl~~~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG 174 (334)
|+++|+++..|. + .+..+|.+++++.+.- .+. ..+....|. .+|++.++++++ .+++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~v~it~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGL----LPARRAIAEYLSRDLPYELSTDDIYLTAGC 126 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccC----HHHHHHHHHHHhhccCCCCChhhEEEeCCH
Confidence 588999988753 2 4777888888776532 221 123333444 455666666553 2568888999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHh
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLS 247 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~ 247 (334)
++|+..++.+++.+ ||.|++..+.+..+.....+. +.+++.++. .|+++|+++++
T Consensus 127 ~~al~l~~~~l~~~--------------Gd~Vlv~~P~y~~y~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~ 188 (430)
T PLN00145 127 AQAIEIIMSVLAQP--------------GANILLPRPGYPLYEARAVFS----GLEVRHFDLLPERGWEVDLEGVEALAD 188 (430)
T ss_pred HHHHHHHHHHhcCC--------------CCEEEEcCCCCccHHHHHHHc----CCEEEEeeCCcccCCcCCHHHHHHHhC
Confidence 99999999988764 788888888777766555555 777777753 27889988876
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCccc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa 323 (334)
+ ++++|++.+++||+|.+.| +++|+++|+++|+++|+||+|...+++.. ..... .++-.. .-|+++||||.
T Consensus 189 ~---~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~-~~~~~~-~vi~~~S~SK~ 263 (430)
T PLN00145 189 E---NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMG-VFGEVA-PVLTLGSISKR 263 (430)
T ss_pred c---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchh-hhcccC-cEEEEeccccc
Confidence 4 6888999999999999998 78889999999999999999987665421 11111 111111 24899999999
Q ss_pred ccCCc---cEEee
Q 019931 324 AGCQG---GFIAC 333 (334)
Q Consensus 324 ~G~~G---G~i~~ 333 (334)
|++.| ||+++
T Consensus 264 ~~~pG~RlG~iv~ 276 (430)
T PLN00145 264 WVVPGWRLGWIAT 276 (430)
T ss_pred cCCCCeeEEEEEE
Confidence 99888 89874
No 207
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.75 E-value=1.2e-16 Score=154.77 Aligned_cols=179 Identities=16% Similarity=0.139 Sum_probs=131.0
Q ss_pred CCCCHHHHHHHHHhcC------CCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHHhhhhhhc
Q 019931 122 LSSHPTIAKAAARHGM------GPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAVGNIASLL 192 (334)
Q Consensus 122 l~~~p~v~~a~~~~g~------g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al~~~~~~~ 192 (334)
+..++.+++++.++-. +.+.++...+....+.++++.+++++|.+ .+++++++++++..++.+++++
T Consensus 10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~---- 85 (376)
T TIGR01977 10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKE---- 85 (376)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCC----
Confidence 3445778886654321 11122222223467789999999999964 3566688899998888876553
Q ss_pred cCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCC
Q 019931 193 AGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGD 267 (334)
Q Consensus 193 ~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~ 267 (334)
+|.|++....|.+....+.......+.+++.++. .|+++|++++++ ++++|++.+++|++|.
T Consensus 86 ----------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 86 ----------GDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT---NTKLIVVSHASNVTGT 152 (376)
T ss_pred ----------CCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC---CCeEEEEECCCCCccc
Confidence 7889988888988765543322222677777654 378888888854 6889999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccC
Q 019931 268 FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGC 326 (334)
Q Consensus 268 ~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~ 326 (334)
+.|+++|.++|+++|+++|+|++|++|... +++. .++|+++.|++|.+++
T Consensus 153 ~~~~~~i~~l~~~~~~~livD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~ 203 (376)
T TIGR01977 153 ILPIEEIGELAQENGIFFILDAAQTAGVIP---------IDMTELAIDMLAFTGHKGLLG 203 (376)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCccC---------CCchhcCCCEEEecccccccC
Confidence 999999999999999999999999987542 1121 4689999999999854
No 208
>PRK14012 cysteine desulfurase; Provisional
Probab=99.75 E-value=5.8e-17 Score=159.25 Aligned_cols=197 Identities=17% Similarity=0.195 Sum_probs=140.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-----CCCcccc-ccC--chHHHHHHHHHHHhHhCCCc--EEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-----GPRGSAL-ICG--YTNYHRLLESCLADLKKKED--CLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-----g~~~sr~-~~G--~~~~~~~LE~~La~~~g~e~--alv~~sG~~An 178 (334)
+-|+|.++. + ..++.+++++.+|-. +...++. ..+ ..+..+++|+++++++|.+. ++++++|++|+
T Consensus 4 ~iyld~a~~---~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al 79 (404)
T PRK14012 4 PIYLDYSAT---T-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESD 79 (404)
T ss_pred eEEecCcCC---C-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHH
Confidence 345555443 2 257888887766532 1111111 111 13567889999999999753 77889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCc
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRK 253 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~ 253 (334)
..++.++... ..++||.|++....|.+....+..... .|++++.++. .|+++|++++++ ++
T Consensus 80 ~~~l~~l~~~----------~~~~gd~Vi~~~~~~~s~~~~~~~~~~-~g~~~~~v~~~~~g~~d~~~l~~~i~~---~t 145 (404)
T PRK14012 80 NLAIKGAAHF----------YQKKGKHIITSKTEHKAVLDTCRQLER-EGFEVTYLDPQSNGIIDLEKLEAAMRD---DT 145 (404)
T ss_pred HHHHHHHHHh----------hcCCCCEEEEecCccHHHHHHHHHHHh-CCCEEEEEccCCCCcCCHHHHHHhcCC---CC
Confidence 9988876521 002478899999999887766654322 2777777654 288999998864 68
Q ss_pred EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEE
Q 019931 254 KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i 331 (334)
++|++.+++|++|.+.|+++|.++|+++|+++++|++|++|... ..+ ..++|+++.|++|.+|+.| |++
T Consensus 146 ~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~l 216 (404)
T PRK14012 146 ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGAL 216 (404)
T ss_pred EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEEE
Confidence 99999999999999999999999999999999999999976431 111 1357899999999888755 554
Q ss_pred e
Q 019931 332 A 332 (334)
Q Consensus 332 ~ 332 (334)
.
T Consensus 217 ~ 217 (404)
T PRK14012 217 Y 217 (404)
T ss_pred E
Confidence 3
No 209
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.75 E-value=1e-16 Score=157.49 Aligned_cols=196 Identities=18% Similarity=0.193 Sum_probs=140.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc---CCCCccccc-cC--chHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG---MGPRGSALI-CG--YTNYHRLLESCLADLKKKE--DCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g---~g~~~sr~~-~G--~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ 180 (334)
+-|+|.++.. ..++.|++++.+|- .+...++.. .+ .....+++++++++++|.+ .+++++++++++..
T Consensus 4 ~~yld~aa~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~ 79 (402)
T TIGR02006 4 PIYLDYAATT----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNL 79 (402)
T ss_pred cEEeeCCcCC----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence 4567766543 24788888775542 122111111 11 1345688999999999964 46677888899998
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEE
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~l 255 (334)
++.++... ..+++|.|++....|.++...+..... .|.+++.++.+ |+++|++++++ ++++
T Consensus 80 ~l~~l~~~----------~~~~g~~Vi~~~~~h~s~~~~~~~~~~-~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~l 145 (402)
T TIGR02006 80 AIKGIAHF----------YKSKGNHIITSKTEHKAVLDTCRYLER-EGFEVTYLPPKSNGLIDLEELKAAIRD---DTIL 145 (402)
T ss_pred HHHHHHHh----------hcCCCCEEEECCCccHHHHHHHHHHHh-cCCEEEEEccCCCCcCCHHHHHHhcCC---CCEE
Confidence 88776431 002478899888999998776654322 27777777642 78888888864 6899
Q ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEE
Q 019931 256 VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i 331 (334)
|++.+++|++|.+.|+++|.++|+++|+++++|++|++|... .++ ..++|+++.|.+|.+|+.| |++
T Consensus 146 v~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l 214 (402)
T TIGR02006 146 VSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGAL 214 (402)
T ss_pred EEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEE
Confidence 999999999999999999999999999999999999976432 112 1357999999999988654 443
No 210
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=7.6e-17 Score=156.75 Aligned_cols=198 Identities=16% Similarity=0.099 Sum_probs=135.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
+.+++|+.|+ .++..+|.+++++.+......+ ++.. ...+|+++||++++.+ .+++++++.+++..++.+++
T Consensus 32 ~~~~~l~~~~-~~~~~~~~~~~a~~~~~~~~~~----Y~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~ 105 (369)
T PRK08153 32 PFRARIGANE-SGFGPSPSVIAAMREAAAEIWK----YGDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV 105 (369)
T ss_pred cceeEecCCC-CCCCCCHHHHHHHHHHHHHhhc----CCCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc
Confidence 3457999997 6898999999987654221111 1111 2578999999999853 45555555666666777666
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-CCHHHHHHHHhcC-CCCcEEEEEcCCCCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-CDMSHLKTLLSCC-TMRKKVVVTDSLFSM 264 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-~D~~~Le~~l~~~-~~~~~lVv~e~v~n~ 264 (334)
++ ||.|+++.+.|......+... +.+++.++. +|..+++++++.. ..++++|++.+++||
T Consensus 106 ~~--------------gd~vlv~~p~y~~~~~~~~~~----g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NP 167 (369)
T PRK08153 106 EP--------------GDPVVTSLGAYPTFNYHVAGF----GGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNP 167 (369)
T ss_pred CC--------------CCEEEECCCcchHHHHHHHHc----CCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCC
Confidence 54 888999998888777666655 778877764 3433444443322 136788888899999
Q ss_pred CCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 265 DGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+|.+.|.+++.++++.+ +++||+||+|... +..+. ...+....+..|++.||||+||+.| ||++++
T Consensus 168 tG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~--~~~~~--~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~ 238 (369)
T PRK08153 168 MGSWHPAADIVAFIEALPETTLLVLDEAYCET--APAGA--APPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA 238 (369)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEeCchhhh--cCccc--chhhhhcCCCEEEEecchHhccCcchheeeeecC
Confidence 99999988887777654 8999999999853 32221 1111111123488999999999888 999874
No 211
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=6.6e-17 Score=137.56 Aligned_cols=158 Identities=24% Similarity=0.294 Sum_probs=119.6
Q ss_pred HHHHHHHHHhHh--CCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhH-HHHHHhhhcCC
Q 019931 152 HRLLESCLADLK--KKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASII-DGIRIAERTKM 228 (334)
Q Consensus 152 ~~~LE~~La~~~--g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~-~g~~ls~~~~g 228 (334)
++++++.+++++ +.+.++++++|++|+..+++++..+ ++.|+.....|.+.. ..+... +
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~~~~~----g 63 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGP--------------GDEVIVDANGHGSRYWVAAELA----G 63 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCC--------------CCEEEEeecccceehhhHHHhc----C
Confidence 478999999999 8888999999999999999988653 566777666776655 444444 7
Q ss_pred cEEEEeeCCCH-------HHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 229 VEVFVYKHCDM-------SHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 229 ~~v~~~~~~D~-------~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
.++..++.++- +.+++... ..++++|++++++++.|...|+++|.++|+++|+++|+|++|..+......
T Consensus 64 ~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~- 140 (170)
T cd01494 64 AKPVPVPVDDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG- 140 (170)
T ss_pred CEEEEeccCCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-
Confidence 88888775421 13333222 247899999999999999999999999999999999999999987553211
Q ss_pred ccccccCCCCCccEEEecCcccccCC-ccEEeeC
Q 019931 302 GVAEQFNCERDVDICVGTLSKAAGCQ-GGFIACR 334 (334)
Q Consensus 302 g~~~~~~~~~~~Div~~SlsKa~G~~-GG~i~~~ 334 (334)
......++|+++.|++|.||+. +|+++.+
T Consensus 141 ----~~~~~~~~d~~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 141 ----VLIPEGGADVVTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred ----cccccccCCEEEEEcccccCCCceEEEEeC
Confidence 1122345799999999999874 4887753
No 212
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=6.3e-17 Score=156.94 Aligned_cols=196 Identities=15% Similarity=0.060 Sum_probs=138.9
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcC----CCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGM----GPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFAA 177 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~----g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~A 177 (334)
..++++.|+ ..+..+|.+++++.+.-. ....+.. .| ..+|++.+++++ | .+++++++++.++
T Consensus 27 ~~i~l~~~~-~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g----~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~ 100 (368)
T PRK03317 27 VPVRLNTNE-NPYPPSPALVADIAEAVAEAAAGLNRYPD-RD----AVALRADLAAYLTAQTGVGLTVENVWAANGSNEI 100 (368)
T ss_pred ceeEecCCC-CCCCCCHHHHHHHHHHHhhhhhhhccCCC-Cc----hHHHHHHHHHHhhhhccCCCChhhEEECCCHHHH
Confidence 458888886 356678999998765421 1122211 12 355777777776 3 2457777888889
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~ 252 (334)
+..++.+++++ ||.|++..+.+..+...++.. +.+++.++. .|++++++++++ .+
T Consensus 101 l~~~~~~~~~~--------------gd~v~v~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~~~~--~~ 160 (368)
T PRK03317 101 LQQLLQAFGGP--------------GRTALGFVPSYSMHPIIARGT----HTEWVEGPRAADFTLDVDAAVAAIAE--HR 160 (368)
T ss_pred HHHHHHHhcCC--------------CCEEEEeCCChHHHHHHHHhc----CCeeEEcccCCCCCCCHHHHHHHHhc--cC
Confidence 99999988765 787888777777666555544 677776642 278899888864 25
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEecCcccccCCc---
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVGTLSKAAGCQG--- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~SlsKa~G~~G--- 328 (334)
+++|++++++||+|.+.+.+++.+|++.++++||+||+|+. ++..|.. .....+..++ .|+++||||+||+.|
T Consensus 161 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~--~~~~~~~~~~~~~~~~~~-~i~~~SfSK~~g~~GlRi 237 (368)
T PRK03317 161 PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAE--FRRSGTPSALTLLPEYPR-LVVSRTMSKAFAFAGGRL 237 (368)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchh--hcccCCcCHHHHHHhCCC-EEEEEechhhhccchhhh
Confidence 67888889999999999999999999999999999999985 3333322 2222222232 488899999999888
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
||++++
T Consensus 238 G~~~~~ 243 (368)
T PRK03317 238 GYLAAA 243 (368)
T ss_pred hhhhCC
Confidence 888764
No 213
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.74 E-value=2.3e-16 Score=154.58 Aligned_cols=208 Identities=15% Similarity=0.113 Sum_probs=143.2
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC-----C-cEEEeccHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK-----E-DCLLCPTGFAANMAV 181 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e-~alv~~sG~~An~~a 181 (334)
|+++++|+.++ ..+..++.+++++.+.-.+...+....|...+.+.+.+.+.+.+|. + .+++++++.+|+..+
T Consensus 28 ~~~~i~l~~~~-p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 28 DLPPISLSIGE-PKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred CCCeEecCCCC-CCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 48999999886 3455678888877654323333444455555555555555554452 3 466778888999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~ 254 (334)
+.++++++ +.+|.|++..+.+......++.. |.+++.++. .|+++|++.+.+ +++
T Consensus 107 ~~~l~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~----g~~~~~vp~~~~~~~~~d~~~l~~~~~~---~~k 168 (396)
T PRK09147 107 AQTVIDRD-----------GPGPLVVCPNPFYQIYEGAALLA----GAEPYFLNCDPANNFAPDFDAVPAEVWA---RTQ 168 (396)
T ss_pred HHHHcCCC-----------CCCCEEEEcCCCccchHHHHHhc----CCEEEEeccCccccCccCHHHHHHHHhh---ccE
Confidence 98887640 12678888888777666666665 788887764 267788776653 678
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc--cc---ccCCC-CCccEEEecCccccc
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV--AE---QFNCE-RDVDICVGTLSKAAG 325 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~--~~---~~~~~-~~~Div~~SlsKa~G 325 (334)
+|++.+++||+|.+.+ +++|+++|++|+++||+||+|....+....... .. ..+.. .+..|+++||||.||
T Consensus 169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~ 248 (396)
T PRK09147 169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSN 248 (396)
T ss_pred EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccC
Confidence 8888999999999887 677888999999999999999976553210111 10 01111 123489999999998
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 249 ~~GlRiG~~~~~ 260 (396)
T PRK09147 249 VPGLRSGFVAGD 260 (396)
T ss_pred CccceeeeecCC
Confidence 877 998864
No 214
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.74 E-value=1.7e-17 Score=164.79 Aligned_cols=217 Identities=13% Similarity=0.099 Sum_probs=141.8
Q ss_pred hcc-cceeEEEeecC---ccCCCCCCHHHH--HHHHHh-cCCC--CccccccCchHHHHHHHHHHHhHh---CCCcEEEe
Q 019931 104 FAR-QFKRLLLFSGN---DYLGLSSHPTIA--KAAARH-GMGP--RGSALICGYTNYHRLLESCLADLK---KKEDCLLC 171 (334)
Q Consensus 104 ~~~-~g~~~l~f~sn---~yLgl~~~p~v~--~a~~~~-g~g~--~~sr~~~G~~~~~~~LE~~La~~~---g~e~alv~ 171 (334)
+|. +|++||||.+. ..||. +||+|. +|+.+. .... ..+.. .-.++...++.++|+++. +.++++++
T Consensus 32 ~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~q~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~v~f~ 109 (431)
T TIGR03251 32 VDARDGRRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNS-DVYTVAMARFVDTFARVLGDPALPHLFFI 109 (431)
T ss_pred EECCCCCChhhcccChhhcCCCC-CChhhhHHHHHHHHHHHhhhcccccC-CCCCHHHHHHHHHHHHhcCCCCcCEEEEe
Confidence 464 78999999774 34676 588888 766443 2211 00111 112455577778888875 24678888
Q ss_pred ccHHHHHHHHHHHHhhhhhhccCC-----CccCCCCCeEEEEcCCCchhhHHHHHHhhhc-C--C-cEE-------E---
Q 019931 172 PTGFAANMAVIVAVGNIASLLAGD-----EKSFKDEKIAIFSDALNHASIIDGIRIAERT-K--M-VEV-------F--- 232 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~~~~~~-----~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~-~--g-~~v-------~--- 232 (334)
+||++||+++++....- +.. ..+.+++..+|.....+|+.....+.++... . . ... .
T Consensus 110 ~sGsEAve~AlklAr~~----t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 185 (431)
T TIGR03251 110 EGGALAVENALKTAFDW----KSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKL 185 (431)
T ss_pred CCcHHHHHHHHHHHHHH----hhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcc
Confidence 99999999999965321 100 0011112456778888999876666554210 0 0 000 0
Q ss_pred EeeC-------------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCccccc
Q 019931 233 VYKH-------------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 233 ~~~~-------------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv 295 (334)
+++. ++++++++.+.....+...|++|++.+..|.+.| |++|+++|++||++||+||+|+ |
T Consensus 186 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G- 263 (431)
T TIGR03251 186 TFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-G- 263 (431)
T ss_pred cCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-c-
Confidence 0010 1345566666544457889999999999997754 9999999999999999999999 5
Q ss_pred ccCCCccc-ccccCCCCCccEEEecCcccccCCccEEee
Q 019931 296 CGKNGGGV-AEQFNCERDVDICVGTLSKAAGCQGGFIAC 333 (334)
Q Consensus 296 ~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~~GG~i~~ 333 (334)
+|++|.++ .+++++.| ||+ +++|++ ..||++++
T Consensus 264 ~GrtG~~~a~~~~gv~P--Di~--~~gK~~-~~~g~~~~ 297 (431)
T TIGR03251 264 VGLTGTAWAYQQLGVQP--DIV--AFGKKT-QVCGIMAG 297 (431)
T ss_pred cCccchHHHHHhcCCCC--CEE--EecccC-ccceEEec
Confidence 68888875 46888877 566 799998 45666654
No 215
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.74 E-value=3.5e-16 Score=153.75 Aligned_cols=205 Identities=16% Similarity=0.098 Sum_probs=139.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHH-hcC-CCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAAR-HGM-GPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~-~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~a 181 (334)
..+++|+.++ .....++.+.+++.+ ... ....+....|...+.+.+.+.+.+..|. + ++++++++.+|+..+
T Consensus 33 ~~~~~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~ 111 (403)
T PRK08636 33 EDIIDFSMGN-PDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHL 111 (403)
T ss_pred CCEEEcCCcC-CCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHH
Confidence 6788998875 334345656665543 222 1233444455555555555555554452 4 477778889999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHH----HHHHHHhcCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMS----HLKTLLSCCT 250 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~----~Le~~l~~~~ 250 (334)
+.+++.+ ||.|+++.+.+..+...+... |++++.++. .|++ .+++++++..
T Consensus 112 ~~~l~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 173 (403)
T PRK08636 112 VQAITNP--------------GDVAIVPDPAYPIHSQAFILA----GGNVHKMPLEYNEDFELDEDQFFENLEKALRESS 173 (403)
T ss_pred HHHhCCC--------------CCEEEEcCCCCcchHHHHHhc----CCEEEEEeccccccCccChhhhhhHHHHHHhhcc
Confidence 9988865 788999888888877777666 788877753 1444 4566665544
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~SlsKa~G 325 (334)
.++++|++++++||+|.+.+ +++|+++|++|+++||+||+|....++. ........+ .++..|.++||||+||
T Consensus 174 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 174 PKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCCCccccEEEEEecccccC
Confidence 57889999999999999988 5678889999999999999999765532 111111112 1234466899999998
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
..| ||++++
T Consensus 252 ~~GlRiG~iv~~ 263 (403)
T PRK08636 252 MAGWRVGFVVGN 263 (403)
T ss_pred CccceeeeeeCC
Confidence 766 888764
No 216
>PLN02656 tyrosine transaminase
Probab=99.74 E-value=2.7e-16 Score=154.97 Aligned_cols=201 Identities=15% Similarity=0.103 Sum_probs=139.1
Q ss_pred cceeEEEeecCcc---CCCCCCHHHHHHHHHhcCC--CCccccccCchHHHHHHHHHHHhHhC--------CCcEEEecc
Q 019931 107 QFKRLLLFSGNDY---LGLSSHPTIAKAAARHGMG--PRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPT 173 (334)
Q Consensus 107 ~g~~~l~f~sn~y---Lgl~~~p~v~~a~~~~g~g--~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~s 173 (334)
.|+.+++|+..+. ..+..++.+++++.+.-.. ...+....|. .+|+++++++++ .++++++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 104 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGL----PQARRAIAEYLSRDLPYKLSLDDVFITSG 104 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCC----HHHHHHHHHHHHHhcCCCCCcccEEEeCC
Confidence 4589999987663 2477788888877653221 1222223344 445555666542 256788888
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHH
Q 019931 174 GFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLL 246 (334)
Q Consensus 174 G~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l 246 (334)
+++|+..++.+++++ ||.|++..+.|.......... +++++.++. .|+++|++++
T Consensus 105 ~~~al~~~~~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~i~~~~~~~~~~d~~~l~~~~ 166 (409)
T PLN02656 105 CTQAIDVALSMLARP--------------GANILLPRPGFPIYELCAAFR----HLEVRYVDLLPEKGWEVDLDAVEALA 166 (409)
T ss_pred hHHHHHHHHHHHhCC--------------CCeEEEeCCCCCcHHHHHHHc----CCEEEEEeCCCcCCCCCCHHHHHHHh
Confidence 999999999888764 788888888877665555554 777777763 2678888877
Q ss_pred hcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccc
Q 019931 247 SCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 247 ~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa 323 (334)
++ ++++|++.+++||+|.+.+ +++|+++|++||++||+||+|...++...-.-....+.... .-|+++||||+
T Consensus 167 ~~---~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~vi~~~SfSK~ 242 (409)
T PLN02656 167 DQ---NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIV-PVLTLGSLSKR 242 (409)
T ss_pred cc---CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccC-cEEEEcccchh
Confidence 54 6788888889999998864 78899999999999999999996555321100001111111 24889999999
Q ss_pred ccCCc---cEEee
Q 019931 324 AGCQG---GFIAC 333 (334)
Q Consensus 324 ~G~~G---G~i~~ 333 (334)
|+..| ||+++
T Consensus 243 f~~pGlRiG~~i~ 255 (409)
T PLN02656 243 WIVPGWRLGWFVT 255 (409)
T ss_pred ccCcceeEEEEEE
Confidence 98877 88876
No 217
>PRK07683 aminotransferase A; Validated
Probab=99.74 E-value=3.9e-16 Score=152.62 Aligned_cols=199 Identities=13% Similarity=0.118 Sum_probs=140.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCC-CCccccccCchHHHHHHHHHHHhHh----C----CC-cEEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMG-PRGSALICGYTNYHRLLESCLADLK----K----KE-DCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~----g----~e-~alv~~sG~~An 178 (334)
..+++|..++ ..+..++.+++++.+.-.. ...+....|. .+|++++++++ | .+ ++++++++++|+
T Consensus 28 ~~~i~l~~~~-p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al 102 (387)
T PRK07683 28 DNLISLTIGQ-PDFPTPSHVKEAAKRAITENYTSYTHNAGL----LELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI 102 (387)
T ss_pred CCeEEecCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 4578888875 3455577888877654221 1122222333 55666666665 3 23 577778889999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~ 252 (334)
..++.+++.+ ||.|+++.+.+......++.. |++++.++.+ |.+++++.+++ +
T Consensus 103 ~~~~~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~l~~~~~~---~ 161 (387)
T PRK07683 103 DIAFRTILEP--------------GTEVILPAPIYPGYEPIIRLC----GAKPVFIDTRSTGFRLTAEALENAITE---K 161 (387)
T ss_pred HHHHHHhCCC--------------CCEEEEcCCCccchHHHHHHc----CCEEEEeecCcccCCCCHHHHHHhcCc---C
Confidence 9998887654 788888888776666666655 7888887643 56778887754 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++.+++||+|.+.+ +++|+++|+++|+++|+||+|....+++....+....+. ++..|+++||||.||..|
T Consensus 162 ~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~s~SK~~~~pGl 240 (387)
T PRK07683 162 TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM-REKTIVINGLSKSHSMTGW 240 (387)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC-cCCeEEEeeccccccCccc
Confidence 788899999999999876 788899999999999999999976665433333322121 233588999999999878
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 241 RiG~i~~~ 248 (387)
T PRK07683 241 RIGFLFAP 248 (387)
T ss_pred eeEEEEcC
Confidence 998864
No 218
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.74 E-value=2e-16 Score=154.94 Aligned_cols=199 Identities=15% Similarity=0.141 Sum_probs=137.4
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC---CCC---ccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM---GPR---GSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g~~---~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~ 179 (334)
.-|+|-++. |+ .++.+++++.+|-. +.. .+....-.....+++++.+++++|.+ .+++++++++++.
T Consensus 17 ~iyld~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~ 92 (398)
T TIGR03392 17 TVYLDSAAT---AL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESIN 92 (398)
T ss_pred eEEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHH
Confidence 456665444 33 46778887766521 111 11110011245678999999999963 3566688889988
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcE
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~ 254 (334)
.++.++.... .++||.|++....|.+....+.......|++++.++.+ |+++|++++++ +++
T Consensus 93 ~~~~~~~~~~----------~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~---~t~ 159 (398)
T TIGR03392 93 LVAQSYARPR----------LQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP---RTR 159 (398)
T ss_pred HHHHHhhhcc----------CCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc---Cce
Confidence 8888764210 02478899888888875433322112237888887642 78888888864 789
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEEe
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+|++.+++|++|.+.|+++|.++|+++|+++++|++|+.|.+- ..+ ..++|+++.|++|.+|+.| |++.
T Consensus 160 lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~ 230 (398)
T TIGR03392 160 ILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGVLY 230 (398)
T ss_pred EEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEEEE
Confidence 9999999999999999999999999999999999999865321 111 1357899999999988876 7765
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 231 ~ 231 (398)
T TIGR03392 231 G 231 (398)
T ss_pred E
Confidence 4
No 219
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.74 E-value=2.7e-16 Score=154.00 Aligned_cols=198 Identities=16% Similarity=0.130 Sum_probs=136.1
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcC---CCC--ccccc-cCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGM---GPR--GSALI-CGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMA 180 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g~~--~sr~~-~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ 180 (334)
-|+|.++. |. .++.+.+++.++-. +.. +.... .-.....+++++.+++++|.+ .+++++++++++..
T Consensus 20 ~yld~~~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 20 VYLDSAAT---SQ-KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL 95 (403)
T ss_pred EEEeCccc---cC-CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence 45554443 32 46778887765421 111 11111 111245678999999999965 46666777888777
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEE
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~l 255 (334)
++.++... ..+++|.|++....|.+....+.......|.+++.++. .|++++++.+.+ ++++
T Consensus 96 ~~~~~~~~----------~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~---~~~l 162 (403)
T TIGR01979 96 VAYSWGDS----------NLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE---KTKL 162 (403)
T ss_pred HHHHhhhh----------cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc---CCeE
Confidence 77765321 00247889988888888654433221122777777764 278888888864 7899
Q ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEEee
Q 019931 256 VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
|++.+++|++|.+.|+++|.++|+++|+++++|++|+.|... ..+ ..++|+++.|++|.+|+.| |++..
T Consensus 163 v~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~g~l~~ 233 (403)
T TIGR01979 163 VAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---------VDVQALDCDFYVFSGHKMYGPTGIGVLYG 233 (403)
T ss_pred EEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc---------cCccccCCCEEEEecccccCCCCceEEEE
Confidence 999999999999999999999999999999999999876321 111 1357899999999999877 77754
No 220
>PRK07550 hypothetical protein; Provisional
Probab=99.74 E-value=4e-16 Score=152.26 Aligned_cols=202 Identities=16% Similarity=0.140 Sum_probs=137.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~ai 182 (334)
+.+++|.+++ ..+..++.+.+++.+.. ... ..+....|..++.+.+.+.+.+..|. +++++++++++|+..++
T Consensus 29 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~ 107 (386)
T PRK07550 29 GPLIDLSQAV-PGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAM 107 (386)
T ss_pred CCeEEeCCCC-CCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 6789999887 34555777888766532 211 12223456655556666666555452 45566666688988888
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~l 255 (334)
.+++.+ ||.|++..+.+......++.. |.+++.++.+ |.++|++++++ ++++
T Consensus 108 ~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~ 166 (386)
T PRK07550 108 VTLAGA--------------GDEVILPLPWYFNHKMWLDML----GIRPVYLPCDEGPGLLPDPAAAEALITP---RTRA 166 (386)
T ss_pred HHhcCC--------------CCEEEEcCCCCcchHHHHHhc----CCEEEEEecCCCcCCCCCHHHHHHHhcc---cCcE
Confidence 887754 788998888877666555555 7888877742 67888888864 5777
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcc--cccccCCCCCccEEEecCcccccCCc--
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG--VAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g--~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
|++.+++||+|.+.+ +++|+++|++||+++|+||+|+....+. +.. .....+ .....|++.||||++|..|
T Consensus 167 v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 167 IALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-GAPHDLFADPD-WDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCCcchhhCCC-ccccEEEEecchhhccCcccc
Confidence 777789999998887 7789999999999999999998543221 111 111111 1122478999999998655
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 245 iG~i~~~ 251 (386)
T PRK07550 245 VGAVVAS 251 (386)
T ss_pred eEeeecC
Confidence 888764
No 221
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.74 E-value=2.9e-16 Score=154.82 Aligned_cols=205 Identities=15% Similarity=0.122 Sum_probs=141.5
Q ss_pred cceeEEEeecCccC---CCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHH
Q 019931 107 QFKRLLLFSGNDYL---GLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAA 177 (334)
Q Consensus 107 ~g~~~l~f~sn~yL---gl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~A 177 (334)
.++.+|+|+-.++- .+..+|.+++++.+.-. + ...+....|...+.+.+.+.+.+..| .+++++++++.++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 34889999987753 37788888887765422 1 12233344554444444444433323 3567888888999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~ 250 (334)
+..++.+++.+ ||.|++..+.+..+...+... +.+++.++. .|+++|++++++
T Consensus 110 l~~~~~~l~~~--------------gd~v~v~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 169 (409)
T PLN00143 110 AEIIIKVLARP--------------EANILLPRPGFPDVETYAIFH----HLEIRHFDLLPEKGWEVDLDAVEAIADE-- 169 (409)
T ss_pred HHHHHHHHcCC--------------CCEEEEcCCCCcCHHHHHHHc----CCEEEEEeccCCCCCcCCHHHHHHhccc--
Confidence 99999988765 788888888877776666665 778777753 278888887754
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
+++++++.+++||+|.+.+ +++|+++|++|+++||+||+|...+++..-......+.... .-|+++||||.|++.
T Consensus 170 -~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~vi~~~SfSK~f~~p 247 (409)
T PLN00143 170 -NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIV-PVITLGSISKRWMIP 247 (409)
T ss_pred -CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccC-cEEEEccchhhcCCC
Confidence 5777778889999999988 67788899999999999999997555321001111111111 248899999999887
Q ss_pred c---cEEee
Q 019931 328 G---GFIAC 333 (334)
Q Consensus 328 G---G~i~~ 333 (334)
| ||+++
T Consensus 248 GlRvG~~v~ 256 (409)
T PLN00143 248 GWGLGWLVT 256 (409)
T ss_pred ccceEEEEe
Confidence 7 88876
No 222
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.73 E-value=3.1e-16 Score=153.54 Aligned_cols=205 Identities=16% Similarity=0.120 Sum_probs=140.3
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC------CC-cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK------KE-DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g------~e-~alv~~sG~~An~~ 180 (334)
|+++++|..|+ -.+..++.+++++++.......+....|..++.+.+.+.+.+.+| .+ .+++++++.+|+..
T Consensus 27 ~~~~i~l~~~~-p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 27 SKPPIALSIGE-PKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CCCeEEecCCC-CCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 48899999987 356668889998876533333344445554554445544444323 22 35666777889999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCe--EEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKI--AIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTM 251 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd--~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~ 251 (334)
++.+++++ || .|+++.+.+......++.. |.+++.++.. |++++++++.+
T Consensus 106 ~~~~l~~~--------------gd~~~vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~~~~--- 164 (393)
T TIGR03538 106 FAQAVINP--------------GQAPLVVMPNPFYQIYEGAALLA----GAEPYFLNCTAENGFLPDFDAVPESVWR--- 164 (393)
T ss_pred HHHHHcCC--------------CCcceEEecCCCCcchHHHHHhc----CCeEEEeeccccCCCCCCHHHHHHHHhh---
Confidence 99888765 44 4788887777666555555 7888877642 67788877754
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcc--cccc---cCC-CCCccEEEecCcc
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG--VAEQ---FNC-ERDVDICVGTLSK 322 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g--~~~~---~~~-~~~~Div~~SlsK 322 (334)
++++|++.+++||+|.+.+ +++|+++|++|+++||+||+|....+...... .... .+. ..+.-|++.||||
T Consensus 165 ~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 244 (393)
T TIGR03538 165 RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244 (393)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchh
Confidence 6788888899999999988 77889999999999999999986544321111 1111 111 1112389999999
Q ss_pred cccCCc---cEEeeC
Q 019931 323 AAGCQG---GFIACR 334 (334)
Q Consensus 323 a~G~~G---G~i~~~ 334 (334)
.|++.| ||++++
T Consensus 245 ~~~~~GlRvG~~i~~ 259 (393)
T TIGR03538 245 RSNLPGLRSGFVAGD 259 (393)
T ss_pred hcCCcccceEEEecC
Confidence 998877 998864
No 223
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.73 E-value=5.8e-17 Score=156.29 Aligned_cols=158 Identities=22% Similarity=0.200 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
|....||+.++++.|.+++++|+||+.|...++..|+.. .+.+|..+..+... ..-++......+.
T Consensus 77 Pt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT-~~~l~~~~~~~gi 142 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGT-LRILRKFLPKFGG 142 (409)
T ss_pred CchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccH-HHHHHHHHHHhCc
Confidence 556889999999999999999999999999999988764 14455555555444 3333322223477
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC 309 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~ 309 (334)
....++..|++.+++.+++ ++++|++|+|.||...+.|+++|+++|+++|++++||+..+.+++ ..++
T Consensus 143 e~~~vd~~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~---------~~pL 210 (409)
T KOG0053|consen 143 EGDFVDVDDLKKILKAIKE---NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN---------QDPL 210 (409)
T ss_pred eeeeechhhHHHHHHhhcc---CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc---------cChh
Confidence 7777877788888888875 799999999999999999999999999999999999998876633 1233
Q ss_pred CCCccEEEecCcccccC----CccEEee
Q 019931 310 ERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
.-++||++.|++|.||+ .||.++.
T Consensus 211 ~lGADIV~hSaTKyi~Ghsdvi~G~iv~ 238 (409)
T KOG0053|consen 211 PLGADIVVHSATKYIGGHSDVIGGSVVL 238 (409)
T ss_pred hcCCCEEEEeeeeeecCCcceeeeEEec
Confidence 45689999999999987 4677664
No 224
>PRK08175 aminotransferase; Validated
Probab=99.73 E-value=5.7e-16 Score=151.80 Aligned_cols=206 Identities=17% Similarity=0.153 Sum_probs=136.1
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHH-hcCC-CCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAAR-HGMG-PRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~-~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ 180 (334)
|+++++|+.++. ....+|.+.+++.+ ...+ ...+....|..++.+.+.+.+.+.+|. + .+++++++.+++..
T Consensus 28 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~ 106 (395)
T PRK08175 28 GEDIIDFSMGNP-DGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAH 106 (395)
T ss_pred CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHH
Confidence 478899988763 33446666665433 2221 122223334434444444444333342 3 35566666678777
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEE
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lV 256 (334)
++.+++.+ ||.|++..+.+......++.. |++++.++.. +.++|+++++...+++++|
T Consensus 107 ~~~~~~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v 168 (395)
T PRK08175 107 LMLATLDH--------------GDTVLVPNPSYPIHIYGAVIA----GAQVRSVPLVEGVDFFNELERAIRESYPKPKMM 168 (395)
T ss_pred HHHHhCCC--------------CCEEEEcCCCCcchHHHHHHc----CCeEEEEecccCCCcHHHHHHHHhhccCCceEE
Confidence 77777654 788998888888776666655 7888777643 5788998887543468888
Q ss_pred EEcCCCCCCCCccCH---HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC--CCccEEEecCcccccCCc---
Q 019931 257 VTDSLFSMDGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE--RDVDICVGTLSKAAGCQG--- 328 (334)
Q Consensus 257 v~e~v~n~~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~--~~~Div~~SlsKa~G~~G--- 328 (334)
++++++||+|.+.+. ++|.++|++||+++|+||+|....++ +........+. .+..|++.||||.||..|
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRi 246 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYD--GWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRI 246 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccC--CCCCcchhcCCCcccCEEEEeeccccccCcchhh
Confidence 888999999999886 68999999999999999999865553 21111111111 234477899999998766
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
||++++
T Consensus 247 G~~~~~ 252 (395)
T PRK08175 247 GFMVGN 252 (395)
T ss_pred eeeeCC
Confidence 888764
No 225
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.73 E-value=3.6e-16 Score=153.64 Aligned_cols=199 Identities=16% Similarity=0.107 Sum_probs=137.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC---C---CCccccccCchHHHHHHHHHHHhHhCC-C--cEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM---G---PRGSALICGYTNYHRLLESCLADLKKK-E--DCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g---~~~sr~~~G~~~~~~~LE~~La~~~g~-e--~alv~~sG~~An~ 179 (334)
.-|+|.++.. . .++.|++++.+|-. + .+.+....-.....+++++++++++|. + .+++++++++++.
T Consensus 24 ~iYld~a~~~---~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~ 99 (406)
T PRK09295 24 LAYLDSAASA---Q-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGIN 99 (406)
T ss_pred eEEEeCcccc---c-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH
Confidence 4677766654 2 46778887655431 1 111111111235568899999999986 2 4556677788888
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcE
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~ 254 (334)
.++.++... . ..+||.|++....|.+....+.......+++++.++.+ |+++|++++++ +++
T Consensus 100 ~~~~~~~~~--~--------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~t~ 166 (406)
T PRK09295 100 LVANSWGNS--N--------VRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE---RTR 166 (406)
T ss_pred HHHHHhhhh--c--------CCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC---CcE
Confidence 877765211 0 02478888888888876544433222237888877643 78888888864 789
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+|++.+++|++|.+.|+++|.++|+++|+++++|++|+.|... .++. .++|+++.|++|.+|+.| |++.
T Consensus 167 lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~ 237 (406)
T PRK09295 167 LLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGILY 237 (406)
T ss_pred EEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccc---------cCchhcCCCEEEeehhhccCCCCcEEEE
Confidence 9999999999999999999999999999999999999876321 1222 357999999999888876 6765
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 238 ~ 238 (406)
T PRK09295 238 V 238 (406)
T ss_pred E
Confidence 4
No 226
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.73 E-value=5.3e-16 Score=152.05 Aligned_cols=199 Identities=14% Similarity=0.122 Sum_probs=137.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCC------CccccccCchHHHHHHHHHHHhHhCC-C--cEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGP------RGSALICGYTNYHRLLESCLADLKKK-E--DCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~------~~sr~~~G~~~~~~~LE~~La~~~g~-e--~alv~~sG~~An~ 179 (334)
.-|+|-++. +. .++.+.+++++|-... +.+..........+++++++++++|. + .+++++++++++.
T Consensus 20 ~~yld~a~~---~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~ 95 (401)
T PRK10874 20 GVYLDSAAT---AL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESIN 95 (401)
T ss_pred eEEEeCCcc---cC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHH
Confidence 445554443 33 4677888776553211 11111111235568899999999997 3 3556677888888
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcE
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~ 254 (334)
.++.++.... + .+||.|++....|.+....+.......|++++.++. .|++++++++++ +++
T Consensus 96 ~~~~~~~~~~--~--------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~t~ 162 (401)
T PRK10874 96 LVAQSYARPR--L--------QPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP---RTR 162 (401)
T ss_pred HHHHHhhhcc--C--------CCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc---CcE
Confidence 8888774210 0 147888888889888544433221223788877764 368888888854 789
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEEe
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+|++.+++|++|.+.|+++|.++|+++|+++++|++|+.|.+. ..+ ..++|+++.|++|.+|+.| |++.
T Consensus 163 lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~ 233 (401)
T PRK10874 163 ILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGVLY 233 (401)
T ss_pred EEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEEEE
Confidence 9999999999999999999999999999999999999865431 111 1347899999999988876 7765
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 234 ~ 234 (401)
T PRK10874 234 G 234 (401)
T ss_pred E
Confidence 4
No 227
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.73 E-value=5.7e-16 Score=149.89 Aligned_cols=204 Identities=20% Similarity=0.158 Sum_probs=141.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~a 184 (334)
++.+++|+.+ .+|.+.+++.++. ...+......|....++++++.|++++|.+ ..+++++|++++..++.+
T Consensus 22 ~~~~~~~~~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~ 95 (373)
T TIGR03812 22 GRILGSMCTN------PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRA 95 (373)
T ss_pred CcEEEEEeCC------chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHH
Confidence 4777788876 5777777666552 111222334566788899999999999975 458889999999988877
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCc-EEEEE
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRK-KVVVT 258 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~-~lVv~ 258 (334)
+.... . ...++|.|++....|.++...++.. |.+++.+++ .|+++|++++++ ++ +++++
T Consensus 96 ~~~~~---~-----~~~~g~~vl~~~~~h~~~~~~~~~~----G~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~vv~~ 160 (373)
T TIGR03812 96 AKNLA---R-----EEKRTPNIIVPESAHFSFEKAAEML----GLELRYAPLDEDYTVDVKDVEDLIDD---NTIGIVGI 160 (373)
T ss_pred HHHHH---h-----ccCCCcEEEECCcchHHHHHHHHHc----CCeEEEEeeCCCCCcCHHHHHHHHhh---CcEEEEEE
Confidence 65310 0 0013678888889999987777655 788888875 389999998865 34 45555
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCC-CCCccEEEecCcccc-cC--CccEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNC-ERDVDICVGTLSKAA-GC--QGGFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~-~~~~Div~~SlsKa~-G~--~GG~i~~ 333 (334)
. +.|++|.+.|+++|.++|+++|+++++|+||+.++++-...|.. ....+ ...+|.+..|.+|.. ++ .||++++
T Consensus 161 ~-~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~ 239 (373)
T TIGR03812 161 A-GTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFR 239 (373)
T ss_pred C-CCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEe
Confidence 5 57899999999999999999999999999998665321110110 00111 135688888999943 22 4556654
No 228
>PRK03321 putative aminotransferase; Provisional
Probab=99.73 E-value=1e-16 Score=154.33 Aligned_cols=197 Identities=16% Similarity=0.135 Sum_probs=134.1
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhh
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~ 187 (334)
.+++|.+|. ..+..+|.+++++.++-.....+. ..-..+|++.++++++.+ +++++++.++++..++.++++
T Consensus 23 ~~i~l~~~~-~~~~~~~~~~~a~~~~~~~~~~y~-----~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~ 96 (352)
T PRK03321 23 GAIKLSSNE-TPFGPLPSVRAAIARAAAGVNRYP-----DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAG 96 (352)
T ss_pred cceeccCCC-CCCCCCHHHHHHHHHHHHhcCcCC-----CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcC
Confidence 478888885 346567889888766432211111 123578999999999864 355545455566666666655
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
+ ||.|+++.+.+......++.. |.+++.++.+ |++++++++++ ++++|++++++
T Consensus 97 ~--------------gd~Vli~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~ 155 (352)
T PRK03321 97 P--------------GDEVIFAWRSFEAYPILVQVA----GATPVQVPLTPDHTHDLDAMAAAITD---RTRLIFVCNPN 155 (352)
T ss_pred C--------------CCEEEeCCCCHHHHHHHHHHc----CCEEEEccCCCCCCCCHHHHHHhhcc---CCCEEEEeCCC
Confidence 3 788887766554444444444 7788777653 67888887754 67888888999
Q ss_pred CCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
||+|.+.|.++|.++|++ +++++|+||+|....++.............++ .|+++||||+||+.| ||++++
T Consensus 156 NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~v~~ 231 (352)
T PRK03321 156 NPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN-VVVLRTFSKAYGLAGLRVGYAVGH 231 (352)
T ss_pred CCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC-EEEEecchHHhhhHHHhhhhhcCC
Confidence 999999999999999997 59999999999865443211111111111223 488999999999776 888764
No 229
>PLN02187 rooty/superroot1
Probab=99.73 E-value=3.7e-16 Score=156.50 Aligned_cols=199 Identities=16% Similarity=0.136 Sum_probs=139.5
Q ss_pred ceeEEEeecCc--cCC-CCCCHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccH
Q 019931 108 FKRLLLFSGND--YLG-LSSHPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTG 174 (334)
Q Consensus 108 g~~~l~f~sn~--yLg-l~~~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG 174 (334)
++.+++|...| +.. +..++.+.+++.+.- .+. ..+....| ..+|++.+|++++ .+++++++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G----~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAG----ILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCC----hHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 47899998874 333 556677888665532 221 11222333 3456666776652 3567888888
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHh
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLS 247 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~ 247 (334)
++|+..++.+++++ ||.|++..+.+..+...+... |.+++.++. .|+++|+++++
T Consensus 141 ~~al~~~~~~l~~p--------------Gd~Vlv~~P~y~~y~~~~~~~----g~~~~~~~l~~~~~~~~d~~~l~~~~~ 202 (462)
T PLN02187 141 NQGIEIVFESLARP--------------NANILLPRPGFPHYDARAAYS----GLEVRKFDLLPEKEWEIDLEGIEAIAD 202 (462)
T ss_pred HHHHHHHHHHhcCC--------------CCEEEEeCCCCccHHHHHHHc----CCEEEEEeCccccCCccCHHHHHHhcC
Confidence 99999999988765 788888888877766555555 788877753 26888888775
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCc-ccccccCCCCCccEEEecCccc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG-GVAEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~-g~~~~~~~~~~~Div~~SlsKa 323 (334)
+ ++++|++.+|+||+|.+.+ +++|+++|++||++||+||+|...+++..-. .+.. +.-... -|+++||||+
T Consensus 203 ~---~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~-~~~~~~-vi~l~SfSK~ 277 (462)
T PLN02187 203 E---NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK-FASIVP-VLTLAGISKG 277 (462)
T ss_pred C---CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH-hccCCc-EEEEecchhh
Confidence 3 6788888899999999988 7789999999999999999999766642111 1111 111112 4889999999
Q ss_pred ccCCc---cEEee
Q 019931 324 AGCQG---GFIAC 333 (334)
Q Consensus 324 ~G~~G---G~i~~ 333 (334)
|+..| ||+++
T Consensus 278 f~~pGlRiG~~v~ 290 (462)
T PLN02187 278 WVVPGWKIGWIAL 290 (462)
T ss_pred cCCccceeEEEEe
Confidence 98877 89875
No 230
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.72 E-value=8.5e-16 Score=150.20 Aligned_cols=198 Identities=14% Similarity=0.104 Sum_probs=133.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh-------CCCcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK-------KKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~-------g~e~alv~~sG~~An~~a 181 (334)
..+++|..+. ..+..++.+++++.++......+....|. .++++++++++ ..++++++++|++|+..+
T Consensus 30 ~~~i~l~~~~-~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~ 104 (397)
T PRK07568 30 IKVYHLNIGQ-PDIKTPEVFFEAIKNYDEEVLAYSHSQGI----PELREAFAKYYKKWGIDVEPDEILITNGGSEAILFA 104 (397)
T ss_pred CCEEEecCCC-CCCCCCHHHHHHHHHHhcCCcCcCCCCCC----HHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHH
Confidence 5678888776 34555788888887654322223333343 55666666665 235678888899999998
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC--------CHHHHHHHHhcCCCCc
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC--------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~--------D~~~Le~~l~~~~~~~ 253 (334)
+.+++.+ ||.|++..+.+......++.. |.+++.++.+ |+++|++++++ ++
T Consensus 105 ~~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~g~~~~~~~~l~~~~~~---~~ 163 (397)
T PRK07568 105 MMAICDP--------------GDEILVPEPFYANYNGFATSA----GVKIVPVTTKIEEGFHLPSKEEIEKLITP---KT 163 (397)
T ss_pred HHHhcCC--------------CCEEEEecCCCccHHHHHHHc----CCEEEEeecCcccCCCCCCHHHHHHhcCc---cc
Confidence 8887654 677777666666555444444 7777777631 35777777753 67
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEecCcccccCCc-
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
++|++.+++||+|.+.+ +++|.++|+++|+++|+||++....+.... .......+. .+..|++.||||.||+.|
T Consensus 164 ~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~-~~~~i~~~S~SK~~~~~G~ 242 (397)
T PRK07568 164 KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL-EDRVIIIDSVSKRYSACGA 242 (397)
T ss_pred eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC-cCCEEEEecchhhccCCCc
Confidence 88888899999998876 788999999999999999999864432111 111111111 223488999999998655
Q ss_pred --cEEee
Q 019931 329 --GFIAC 333 (334)
Q Consensus 329 --G~i~~ 333 (334)
||+++
T Consensus 243 R~G~~~~ 249 (397)
T PRK07568 243 RIGCLIS 249 (397)
T ss_pred ceEEEec
Confidence 88775
No 231
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.72 E-value=5.8e-16 Score=151.97 Aligned_cols=199 Identities=18% Similarity=0.206 Sum_probs=139.7
Q ss_pred ceeEEEeecCccC---CCCCCHHHHHHHHHhcCCC--CccccccCchHHHHHHHHHHHhHhC-------CCcEEEeccHH
Q 019931 108 FKRLLLFSGNDYL---GLSSHPTIAKAAARHGMGP--RGSALICGYTNYHRLLESCLADLKK-------KEDCLLCPTGF 175 (334)
Q Consensus 108 g~~~l~f~sn~yL---gl~~~p~v~~a~~~~g~g~--~~sr~~~G~~~~~~~LE~~La~~~g-------~e~alv~~sG~ 175 (334)
|+.+++|..+++- .+..++.+++++.+.-... .++....|. .+|+++++++++ .++++++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~aia~~~~~~~~~~~~~~i~~t~G~~ 105 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGA----LSAREAIASYYHNPDGPIEADDVVLCSGCS 105 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCC----HHHHHHHHHHHhhcCCCCCHHHEEECcChH
Confidence 3788999988753 4667888888776542221 112223333 556677777665 35678888999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~ 248 (334)
+|+..++.+++.+ ||.|++..+.+......+... |++++.++. .|++.|++.+++
T Consensus 106 ~al~~~~~~l~~~--------------gd~v~i~~P~y~~~~~~~~~~----g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 106 HAIEMCIAALANA--------------GQNILVPRPGFPLYETLAESM----GIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred HHHHHHHHHhCCC--------------CCEEEEeCCCChhHHHHHHHc----CCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 9999999888764 677777777766666555555 777777653 267888887754
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCC-ccEEEecCcccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD-VDICVGTLSKAA 324 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~-~Div~~SlsKa~ 324 (334)
++++|++.+++||+|.+.+ +++|+++|+++|+++|+||+|....+. +........+.++ .-|+++||||+|
T Consensus 168 ---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~ 242 (401)
T TIGR01264 168 ---KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS--GATFEPLASLSSTVPILSCGGLAKRW 242 (401)
T ss_pred ---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC--CcccccHHHcCCCCcEEEEccCcccC
Confidence 5788899999999999876 778899999999999999999865443 2111111122222 138899999999
Q ss_pred cCCc---cEEee
Q 019931 325 GCQG---GFIAC 333 (334)
Q Consensus 325 G~~G---G~i~~ 333 (334)
+..| ||+++
T Consensus 243 ~~~GlRiG~iv~ 254 (401)
T TIGR01264 243 LVPGWRLGWIII 254 (401)
T ss_pred CCccceEEEEEe
Confidence 8877 88876
No 232
>PRK09265 aminotransferase AlaT; Validated
Probab=99.72 E-value=6.5e-16 Score=151.82 Aligned_cols=199 Identities=14% Similarity=0.128 Sum_probs=135.6
Q ss_pred ceeEEEeecCc--cCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh------C--CCcEEEeccHHHH
Q 019931 108 FKRLLLFSGND--YLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK------K--KEDCLLCPTGFAA 177 (334)
Q Consensus 108 g~~~l~f~sn~--yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~------g--~e~alv~~sG~~A 177 (334)
|+.+++|...+ ..++..++.+.+++.+.......+....|. .+|++.+++++ + .++++++++++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~ 107 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGL----FSARKAIMQYYQQKGIPDVDVDDIYIGNGVSEL 107 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCc----HHHHHHHHHHHhccCCCCCCcccEEEeCChHHH
Confidence 47889998743 347778888888766542222222223333 45667777765 3 2445666666777
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~ 250 (334)
+..++.+++.+ ||.|++..+.|......+... +.+++.++. .|++++++++..
T Consensus 108 l~~~~~~~~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~v~~~~~~~~~~~~d~~~l~~~~~~-- 167 (404)
T PRK09265 108 IVMAMQALLNN--------------GDEVLVPAPDYPLWTAAVSLS----GGKPVHYLCDEEAGWFPDLDDIRSKITP-- 167 (404)
T ss_pred HHHHHHHhCCC--------------CCEEEEeCCCCcChHHHHHHc----CCEEEEEecccccCCCCCHHHHHHhccc--
Confidence 88888887654 788888888888777666655 666665542 267888887753
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCC-ccEEEecCcccccC
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD-VDICVGTLSKAAGC 326 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~-~Div~~SlsKa~G~ 326 (334)
++++|++.+++||+|.+.+ +++|+++|+++|+++|+||+|....++....... ..+.++ .-|+++||||+||+
T Consensus 168 -~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~~~ 244 (404)
T PRK09265 168 -RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISI--ASLAPDLLCVTFNGLSKAYRV 244 (404)
T ss_pred -cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCH--HHcCCCceEEEEecchhhccC
Confidence 6788888899999999998 8889999999999999999998654432110111 111122 23678999999987
Q ss_pred Cc---cEEee
Q 019931 327 QG---GFIAC 333 (334)
Q Consensus 327 ~G---G~i~~ 333 (334)
.| ||+++
T Consensus 245 pGlRiG~~v~ 254 (404)
T PRK09265 245 AGFRVGWMVL 254 (404)
T ss_pred cccceEEEEE
Confidence 76 88774
No 233
>PLN02651 cysteine desulfurase
Probab=99.72 E-value=5.2e-16 Score=150.41 Aligned_cols=186 Identities=18% Similarity=0.181 Sum_probs=133.6
Q ss_pred CCHHHHHHHHHhcC---CCCcc---ccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCC
Q 019931 124 SHPTIAKAAARHGM---GPRGS---ALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGD 195 (334)
Q Consensus 124 ~~p~v~~a~~~~g~---g~~~s---r~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~ 195 (334)
.++.+.+++.+|-. +...+ ..........+++++++++++|.+ .+++++++++++..++.++...
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~------- 83 (364)
T PLN02651 11 IDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHF------- 83 (364)
T ss_pred CCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHh-------
Confidence 46788887765432 11111 001111355788999999999964 4566678889988888766431
Q ss_pred CccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC
Q 019931 196 EKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP 270 (334)
Q Consensus 196 ~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p 270 (334)
...++|.|++....|.++...+.... ..+.+++.++. .|+++|++++++ ++++|++.+++|++|.+.|
T Consensus 84 ---~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~---~t~lv~v~~~~n~tG~~~~ 156 (364)
T PLN02651 84 ---YKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTYLPVKSDGLVDLDELAAAIRP---DTALVSVMAVNNEIGVIQP 156 (364)
T ss_pred ---ccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEEEccCCCCcCCHHHHHHhcCC---CcEEEEEECCCCCceeccc
Confidence 00247889888899998766654332 23677777654 278889988864 6899999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+++|.++|+++|+++++|.+|+.|.+. +.+. .++|+++.|.+|.+|+.| |++.
T Consensus 157 l~~I~~~~~~~g~~~~vD~a~~~g~~~---------~~~~~~~~D~~~~s~hK~~gp~G~g~l~ 211 (364)
T PLN02651 157 VEEIGELCREKKVLFHTDAAQAVGKIP---------VDVDDLGVDLMSISGHKIYGPKGVGALY 211 (364)
T ss_pred HHHHHHHHHHcCCEEEEEcchhhCCcc---------cCcccCCCCEEEechhhhCCCCceEEEE
Confidence 999999999999999999999987431 1222 457999999999766655 5543
No 234
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.72 E-value=8e-16 Score=151.72 Aligned_cols=201 Identities=16% Similarity=0.172 Sum_probs=138.5
Q ss_pred cceeEEEeecCccC---CCCCCHHHHHHHHHhcCC--CCccccccCchHHHHHHHHHHHhHhC--------------CCc
Q 019931 107 QFKRLLLFSGNDYL---GLSSHPTIAKAAARHGMG--PRGSALICGYTNYHRLLESCLADLKK--------------KED 167 (334)
Q Consensus 107 ~g~~~l~f~sn~yL---gl~~~p~v~~a~~~~g~g--~~~sr~~~G~~~~~~~LE~~La~~~g--------------~e~ 167 (334)
.|+.+++|...+.- .+..++.+++++.+.-.. ...+....|. .+|++.++++++ .++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~----~~Lr~aia~~~~~~~~~~~~~~~~~~~~~ 106 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGS----PEAREAVATYWRNSFVHKESLKSTIKKDN 106 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCc----HHHHHHHHHHHHhhccccccccCCCChhh
Confidence 44889999987631 255678888877653221 1222223344 445566666543 246
Q ss_pred EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHH
Q 019931 168 CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMS 240 (334)
Q Consensus 168 alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~ 240 (334)
+++++++++|+..++.+++.+ ||.|++..+.|......++.. |++++.++. .|++
T Consensus 107 i~it~G~~~al~~~~~~~~~~--------------gd~vlv~~P~y~~~~~~~~~~----g~~~~~i~~~~~~~~~~d~~ 168 (412)
T PTZ00433 107 VVLCSGVSHAILMALTALCDE--------------GDNILVPAPGFPHYETVCKAY----GIEMRFYNCRPEKDWEADLD 168 (412)
T ss_pred EEEeCChHHHHHHHHHHhcCC--------------CCEEEEccCCcccHHHHHHHc----CCEEEEEecCccccCcCCHH
Confidence 778888899999999988764 788888888887776666655 777777653 2678
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEE
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICV 317 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~ 317 (334)
+|++++++ ++++|++.+++||+|.+.+ +++|+++|+++|++||+||+|...+++..-......+.-... -|++
T Consensus 169 ~l~~~~~~---~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~i~~ 244 (412)
T PTZ00433 169 EIRRLVDD---RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVP-RVIL 244 (412)
T ss_pred HHHHHhcc---CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCc-eEEE
Confidence 88887764 6788889999999998776 677899999999999999999865553211011111111112 3889
Q ss_pred ecCcccccCCc---cEEee
Q 019931 318 GTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 318 ~SlsKa~G~~G---G~i~~ 333 (334)
+||||.||..| ||+++
T Consensus 245 ~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 245 GGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred ccchhhcCCCCeeEEEEEE
Confidence 99999998877 88874
No 235
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.72 E-value=6.2e-16 Score=152.92 Aligned_cols=199 Identities=17% Similarity=0.147 Sum_probs=136.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc----CCC-CccccccC-chHHHHHHHHHHHhHhCCC---cEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG----MGP-RGSALICG-YTNYHRLLESCLADLKKKE---DCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g----~g~-~~sr~~~G-~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~ 179 (334)
.-|+|.++. |. .++.|++++.+|- ... .+...... ....++++++++++++|.+ .+++++++++++.
T Consensus 33 ~iyLd~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~ 108 (424)
T PLN02855 33 LVYLDNAAT---SQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAIN 108 (424)
T ss_pred eEEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHH
Confidence 355665443 32 4677888776542 111 11111110 1244678999999999973 3566677788887
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcE
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~ 254 (334)
.++.++... ...+||.|++....|.+....++......|.+++.++.+ |++++++.+++ +++
T Consensus 109 ~i~~~~~~~----------~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~---~t~ 175 (424)
T PLN02855 109 LVAYTWGLA----------NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE---KTK 175 (424)
T ss_pred HHHHHhhhh----------cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc---Cce
Confidence 777654210 001378888888899886655543222237777777642 78888888864 789
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+|++.+++|++|.+.|+++|.++|+++|+++++|++|+.|... .++. .++|++++|++|.+|+.| |++.
T Consensus 176 lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~ 246 (424)
T PLN02855 176 LVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMP---------VDVQTLGADFLVASSHKMCGPTGIGFLW 246 (424)
T ss_pred EEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CCchhcCCCEEEeecccccCCCccEEEE
Confidence 9999999999999999999999999999999999999865321 1222 346899999999888776 7765
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 247 ~ 247 (424)
T PLN02855 247 G 247 (424)
T ss_pred E
Confidence 4
No 236
>PRK04311 selenocysteine synthase; Provisional
Probab=99.72 E-value=5.3e-16 Score=154.93 Aligned_cols=202 Identities=18% Similarity=0.172 Sum_probs=137.9
Q ss_pred eeEEEeecC---ccCCCC-CCHHHHHHHHHhcCCCCc--cccccC-chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGN---DYLGLS-SHPTIAKAAARHGMGPRG--SALICG-YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn---~yLgl~-~~p~v~~a~~~~g~g~~~--sr~~~G-~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
|+++|-.+. +.+|-+ -++.+++++.++..+... +.+..| ....++.+|+.+++++|++++++|++|++|+..+
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~ 158 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLA 158 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHH
Confidence 777776553 234444 367888887665433221 111111 1245689999999999999999999999999988
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCch----h--hHHHHHHhhhcCCcEEEEeeCC---CHHHHHHHHhcCCCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA----S--IIDGIRIAERTKMVEVFVYKHC---DMSHLKTLLSCCTMR 252 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~----s--~~~g~~ls~~~~g~~v~~~~~~---D~~~Le~~l~~~~~~ 252 (334)
+.++ .+ ||.|++.+..|. + +.+.++.. |++++.++++ +++++++++++ +
T Consensus 159 l~~l-~~--------------GdeVIvs~~e~~~~ggs~~i~~~~~~~----G~~l~~v~~~~~t~~~dle~aI~~---~ 216 (464)
T PRK04311 159 LNAL-AA--------------GKEVIVSRGELVEIGGAFRIPDVMRQA----GARLVEVGTTNRTHLRDYEQAINE---N 216 (464)
T ss_pred HHHh-CC--------------CCEEEEcchhhhhcCcchhhHHHHHHC----CcEEEEECCCCCCCHHHHHHhcCc---c
Confidence 8764 32 565665544333 1 22333333 8888888763 67788888864 7
Q ss_pred cEEEEEcCCCCC--CC--CccCHHHHHHHHHHcCCEEEEecCcccccccCCC-ccccccc----CCCCCccEEEecCccc
Q 019931 253 KKVVVTDSLFSM--DG--DFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQF----NCERDVDICVGTLSKA 323 (334)
Q Consensus 253 ~~lVv~e~v~n~--~G--~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~----~~~~~~Div~~SlsKa 323 (334)
|++|++++++|+ +| ...|+++|+++|++||+++|+|.++ |++++.+ .|+.... .+..++|++++|.+|.
T Consensus 217 TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~ 294 (464)
T PRK04311 217 TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKL 294 (464)
T ss_pred CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCccc
Confidence 899999999885 45 6789999999999999999999964 4454322 1111111 1235789999999999
Q ss_pred cc-CCccEEeeC
Q 019931 324 AG-CQGGFIACR 334 (334)
Q Consensus 324 ~G-~~GG~i~~~ 334 (334)
+| ..+|+++++
T Consensus 295 LgGp~~G~i~g~ 306 (464)
T PRK04311 295 LGGPQAGIIVGK 306 (464)
T ss_pred ccCCceEEEEEc
Confidence 96 578998874
No 237
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.72 E-value=6.5e-16 Score=150.24 Aligned_cols=185 Identities=16% Similarity=0.159 Sum_probs=132.9
Q ss_pred CCHHHHHHHHHhcC---CCCcccccc--CchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCC
Q 019931 124 SHPTIAKAAARHGM---GPRGSALIC--GYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDE 196 (334)
Q Consensus 124 ~~p~v~~a~~~~g~---g~~~sr~~~--G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~ 196 (334)
.++.|++++.+|-. +........ -.....+++++.+++++|.+ .++++++|++++..++.++...
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~-------- 82 (379)
T TIGR03402 11 VDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA-------- 82 (379)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--------
Confidence 36788888766521 221111000 01345678889999999964 4667789999999988876431
Q ss_pred ccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH
Q 019931 197 KSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM 271 (334)
Q Consensus 197 ~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL 271 (334)
..+++.|++....|.+....+..... .|.+++.++. .|++++++++++ ++++|++.+++|++|.+.|+
T Consensus 83 ---~~~~~~vv~~~~~~~s~~~~~~~~~~-~G~~v~~v~~~~~g~~~~~~l~~~i~~---~~~lv~i~~~~n~tG~~~~~ 155 (379)
T TIGR03402 83 ---QPEKRHIITTAVEHPAVLSLCQHLEK-QGYKVTYLPVDEEGRLDLEELRAAITD---DTALVSVMWANNETGTIFPI 155 (379)
T ss_pred ---cCCCCeEEEcccccHHHHHHHHHHHH-cCCEEEEEccCCCCcCCHHHHHHhcCC---CcEEEEEEcccCCeeecccH
Confidence 01257888888899887655543322 3778777764 378899988864 78999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 272 VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 272 ~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
++|.++|+++|+++++|++|+.|..- ..+. .++|+++.|.+|.+|+.| |++.
T Consensus 156 ~~I~~l~~~~g~~vivD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~ 209 (379)
T TIGR03402 156 EEIGEIAKERGALFHTDAVQAVGKIP---------IDLKEMNIDMLSLSGHKLHGPKGVGALY 209 (379)
T ss_pred HHHHHHHHHcCCEEEEECcccccccc---------cCcccCCCCEEEEcHHHcCCCCceEEEE
Confidence 99999999999999999999875321 1222 467999999999777666 5543
No 238
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.72 E-value=4.8e-16 Score=151.41 Aligned_cols=197 Identities=13% Similarity=0.036 Sum_probs=138.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
.++|+|+.|+. .+..+|.+++++.++-..... ..++...-..+|++++++++|. +++++++++++|+..++.+++
T Consensus 28 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~ 104 (380)
T PRK06225 28 KEMIWMGQNTN-HLGPHEEVREAMIRCIEEGEY--CKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFL 104 (380)
T ss_pred CCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCC--CCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhc
Confidence 57889998864 455689999988765332111 1122223357899999999885 457888999999999998877
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCCCcEEEEE
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
.+ ||.|++..+.+......+... |++++.++. .|++++++.+.+ ++++|++
T Consensus 105 ~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l 163 (380)
T PRK06225 105 SP--------------GDNAVTPDPGYLIIDNFASRF----GAEVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYL 163 (380)
T ss_pred CC--------------CCEEEEcCCCCcchHHHHHHh----CceEEeeccccccCCccCCHHHHHhhcCC---CceEEEE
Confidence 54 676776666665554444444 777777652 267888877754 6788887
Q ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEe
Q 019931 259 DSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 259 e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
.+++||+|.+.+ +++|+++|+++|+++|+||++..... +.... ..+.++..|++.||||.||+.| ||++
T Consensus 164 ~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~---~~~~~--~~~~~~~~i~~~s~SK~~g~~G~RiG~i~ 238 (380)
T PRK06225 164 IDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR---EHTLA--AEYAPEHTVTSYSFSKIFGMAGLRIGAVV 238 (380)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc---cCCch--hhcCCCCEEEEeechhhcCCccceeEEEe
Confidence 789999998765 88899999999999999999863211 11111 1123345688999999998766 8887
Q ss_pred eC
Q 019931 333 CR 334 (334)
Q Consensus 333 ~~ 334 (334)
++
T Consensus 239 ~~ 240 (380)
T PRK06225 239 AT 240 (380)
T ss_pred cC
Confidence 63
No 239
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.71 E-value=5.8e-16 Score=149.99 Aligned_cols=196 Identities=16% Similarity=0.097 Sum_probs=132.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC-----CCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK-----KEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g-----~e~alv~~sG~~An~~ai~ 183 (334)
..++||+.++. ....+|.+++++.+... ...+....|...+.+.+.+.+.+..| .+++++++++.+++..++.
T Consensus 27 ~~~i~l~~~~p-~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~ 104 (364)
T PRK07865 27 DGIVDLSVGTP-VDPVPPVIQEALAAAAD-APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPT 104 (364)
T ss_pred CCEEEcCCCCC-CCCCCHHHHHHHHHHHh-hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHH
Confidence 56899998863 34457888887765321 12344445655665666666655444 2345666666777777666
Q ss_pred HH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 184 AV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 184 al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
++ +++ ||.|+++.+.|..+...++.. |++++.++ ++++++. .++++|++++++
T Consensus 105 ~l~~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~--~~~~l~~------~~~~~v~~~~p~ 158 (364)
T PRK07865 105 LLGLGP--------------GDVVVIPELAYPTYEVGARLA----GATVVRAD--SLTELGP------QRPALIWLNSPS 158 (364)
T ss_pred HHcCCC--------------CCEEEECCCCcccHHHHHHhc----CCEEEecC--ChhhCCc------ccceEEEEcCCC
Confidence 65 443 788999999998888777766 78877764 4333322 367888888999
Q ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccccccc----CCCCCccEEEecCcccccCCc---cEEe
Q 019931 263 SMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF----NCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 263 n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~----~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
||+|.+.+ +++|.++|+++|++||+||+|....+. +....... +...+..|+++||||+||..| ||++
T Consensus 159 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~ 236 (364)
T PRK07865 159 NPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWD--AEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVA 236 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccC--CCCCccccccccCCccceEEEEeechhccCCCceeeEEEe
Confidence 99998877 678889999999999999999864432 22111000 111123599999999998766 9988
Q ss_pred eC
Q 019931 333 CR 334 (334)
Q Consensus 333 ~~ 334 (334)
++
T Consensus 237 ~~ 238 (364)
T PRK07865 237 GD 238 (364)
T ss_pred cC
Confidence 64
No 240
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.71 E-value=5.6e-16 Score=152.34 Aligned_cols=199 Identities=20% Similarity=0.199 Sum_probs=138.6
Q ss_pred ceeEEEeecCcc---CCCCCCHHHHHHHHHhcC-CC-CccccccCchHHHHHHHHHHHhHhCC--------CcEEEeccH
Q 019931 108 FKRLLLFSGNDY---LGLSSHPTIAKAAARHGM-GP-RGSALICGYTNYHRLLESCLADLKKK--------EDCLLCPTG 174 (334)
Q Consensus 108 g~~~l~f~sn~y---Lgl~~~p~v~~a~~~~g~-g~-~~sr~~~G~~~~~~~LE~~La~~~g~--------e~alv~~sG 174 (334)
|.++++|...+. ..+..++.+++++.+.-. .. ..+....| ..++++.++++++. +++++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~ 105 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVG----ALAAREAVAEYLSSDLPGKLTADDVVLTSGC 105 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCC----CHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence 478899988764 246667888887765422 11 11212223 35677777777763 457888889
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHh
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLS 247 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~ 247 (334)
++|+..++.+++.+ ||.|++..+.+......+... +.+++.++. .|++++++++.
T Consensus 106 t~al~~~~~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~ 167 (403)
T TIGR01265 106 SQAIEICIEALANP--------------GANILVPRPGFPLYDTRAAFS----GLEVRLYDLLPEKDWEIDLDGLEALAD 167 (403)
T ss_pred HHHHHHHHHHhCCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEecCCcccCCccCHHHHHHHhC
Confidence 99999999988754 777888888776655544444 677776643 26788888775
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCC-ccEEEecCccc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD-VDICVGTLSKA 323 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~-~Div~~SlsKa 323 (334)
+ ++++|++.+++||+|.+.+ +++|+++|+++|+++|+||+|....++. ........+.++ .-|+++||||.
T Consensus 168 ~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~ 242 (403)
T TIGR01265 168 E---KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFASIVPVLSLGGISKR 242 (403)
T ss_pred c---CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhccCCcEEEEeecccc
Confidence 3 6788888899999999876 7889999999999999999998655432 111111112221 13888999999
Q ss_pred ccCCc---cEEee
Q 019931 324 AGCQG---GFIAC 333 (334)
Q Consensus 324 ~G~~G---G~i~~ 333 (334)
|+..| ||+++
T Consensus 243 ~~~pGlRiG~~v~ 255 (403)
T TIGR01265 243 WVVPGWRLGWIII 255 (403)
T ss_pred cCCCcceEEEEEE
Confidence 98877 88775
No 241
>PRK08363 alanine aminotransferase; Validated
Probab=99.71 E-value=7.1e-16 Score=151.21 Aligned_cols=199 Identities=12% Similarity=0.072 Sum_probs=139.2
Q ss_pred ceeEEEeecCccC--CCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHH
Q 019931 108 FKRLLLFSGNDYL--GLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFA 176 (334)
Q Consensus 108 g~~~l~f~sn~yL--gl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~ 176 (334)
|+.+++|+.++.. ++..++.+++++.+.- .+...+....| ..+|++++++++ | .+++++++++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 104 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEG----LPELREAIVKREKRKNGVDITPDDVRVTAAVTE 104 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCC----cHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence 4789999988753 7777888888775532 11111222233 356777777765 3 245677788899
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEee-C------CCHHHHHHHHhcC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYK-H------CDMSHLKTLLSCC 249 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~-~------~D~~~Le~~l~~~ 249 (334)
|+..++.+++++ ||.|++..+.|......+... +.+++.++ . .|++.|++++++
T Consensus 105 al~~~~~~~~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~v~~~~~~~~~~~~d~~~l~~~~~~- 165 (398)
T PRK08363 105 ALQLIFGALLDP--------------GDEILIPGPSYPPYTGLVKFY----GGVPVEYRTIEEEGWQPDIDDIRKKITE- 165 (398)
T ss_pred HHHHHHHHhCCC--------------CCEEEEcCCCCcchHHHHHHc----CCEEEEeccccccCCcCCHHHHHhhCCc-
Confidence 999999888764 788888888888877666655 66666662 1 257777777653
Q ss_pred CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC
Q 019931 250 TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++.+++||+|.+.+ +++|+++|+++|+++|+||+|....+........ ......+ .|++.||||.|+.
T Consensus 166 --~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~-~~~~~~~-vi~~~SfSK~~~~ 241 (398)
T PRK08363 166 --KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPG-SLTKDVP-VIVMNGLSKVYFA 241 (398)
T ss_pred --ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHH-HcCcCCc-EEEEecchhccCC
Confidence 6788888899999998887 8889999999999999999998654422111111 1111112 4778999999988
Q ss_pred Cc---cEEee
Q 019931 327 QG---GFIAC 333 (334)
Q Consensus 327 ~G---G~i~~ 333 (334)
.| ||+++
T Consensus 242 ~GlRiG~~~~ 251 (398)
T PRK08363 242 TGWRLGYIYF 251 (398)
T ss_pred ccceEEEEEE
Confidence 77 88874
No 242
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=2.3e-16 Score=153.37 Aligned_cols=197 Identities=15% Similarity=0.104 Sum_probs=136.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
+.+++|+.|+ -.+..+|.+++++.+.-.....++ . .-..+|++.|+++++. +.+++++++++++..++.+++
T Consensus 29 ~~~i~l~~ne-n~~~~~~~v~~a~~~~~~~~~~Yp-~----~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~ 102 (366)
T PRK01533 29 HSFVKLASNE-NPFGCSPRVLDELQKSWLDHALYP-D----GGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVL 102 (366)
T ss_pred CceEEeCCCC-CCCCCCHHHHHHHHHHHHhcCcCC-C----CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhc
Confidence 6789999986 467778999997765421111111 1 1236788999999885 456777777889888888887
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
++ ||.|++..+.+..+...+... |.+++.++.+ |+++|++.+++ ++++|++.+++
T Consensus 103 ~~--------------gd~vlv~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~d~~~l~~~~~~---~~~~v~i~~P~ 161 (366)
T PRK01533 103 KA--------------GDNIVTAGATFPQYRHHAIIE----GCEVKEVALNNGVYDLDEISSVVDN---DTKIVWICNPN 161 (366)
T ss_pred CC--------------CCEEEEcCCcHHHHHHHHHHc----CCEEEEeecCCCCcCHHHHHHHhCc---CCcEEEEeCCC
Confidence 64 788888888877777666666 7888877653 78888887754 67888888999
Q ss_pred CCCCCccCHHHHHHHH---HHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 263 SMDGDFAPMVELVKLR---RKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela---~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
||+|.+.+.+++.+|+ ++++ ++|+||+|...+............. ..+..|++.||||+||..| ||++++
T Consensus 162 NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~-~~~~vi~~~SfSK~~~l~GlRiG~~i~~ 237 (366)
T PRK01533 162 NPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLE-KHKNILVLRTFSKAYGLASFRVGYAVGH 237 (366)
T ss_pred CCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhc-cCCCEEEEeCchHHhcChHHHHhHHhCC
Confidence 9999999976655555 4555 6788999974332210001111111 1123489999999999877 887653
No 243
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.71 E-value=6.7e-16 Score=149.01 Aligned_cols=195 Identities=16% Similarity=0.091 Sum_probs=137.9
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhh
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~ 188 (334)
.++|..|+. .+..+|.+++++.++-......++ . .+...+|++++|++++. +++++++++++++..++.+++++
T Consensus 24 ~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~~~~y--~-~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~ 99 (351)
T PRK14807 24 KYKMDANET-PFELPEEVIKNIQEIVKSSQVNIY--P-DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINK 99 (351)
T ss_pred eeEccCCCC-CCCCCHHHHHHHHHHhhcCcccCC--C-CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCC
Confidence 467887764 677789999988764321111111 1 12247899999999986 34566666677788888877664
Q ss_pred hhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
||.|++..+.+......++.. |++++.++. .|++++++.++. .++++|++.+++|
T Consensus 100 --------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~~~~--~~~k~v~l~~p~N 159 (351)
T PRK14807 100 --------------GDVVIYPHPSFAMYSVYSKIA----GAVEIPVKLKEDYTYDVGSFIKVIEK--YQPKLVFLCNPNN 159 (351)
T ss_pred --------------CCEEEEeCCChHHHHHHHHHc----CCeEEEeecCCCCCCCHHHHHHHhhc--cCCCEEEEeCCCC
Confidence 777887777766555544544 778777754 267888888864 2678888889999
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
|+|.+.+.+++.+++++++.++|+||+|.. .++.. ....... .+..|+++||||+||..| ||++++
T Consensus 160 PtG~~~~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~---~~~~~~~-~~~vi~~~S~SK~~~~~GlRiG~~v~~ 228 (351)
T PRK14807 160 PTGSVIEREDIIKIIEKSRGIVVVDEAYFE-FYGNT---IVDVINE-FENLIVLRTLSKAFGLAGLRVGYAVAN 228 (351)
T ss_pred CCCCCCCHHHHHHHHHhCCCEEEEeCcchh-hcccc---hHHHhhh-CCCEEEEecchHhcccchhceeeeecC
Confidence 999999999999999999999999999974 33321 1111111 123589999999999877 998864
No 244
>PRK07337 aminotransferase; Validated
Probab=99.71 E-value=1.3e-15 Score=148.83 Aligned_cols=196 Identities=14% Similarity=0.117 Sum_probs=135.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHh----CC----CcEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLK----KK----EDCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~----g~----e~alv~~sG~~An~ 179 (334)
..+++|..++ ..+..+|.+.+++.++-. +...+....|. .+|++.+++++ |. +++++++++++|+.
T Consensus 30 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~ 104 (388)
T PRK07337 30 RDIIHMGIGE-PDFTAPEPVVEAAARALRRGVTQYTSALGL----APLREAIAAWYARRFGLDVAPERIVVTAGASAALL 104 (388)
T ss_pred CCEEEeCCcC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCC----HHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence 5678888775 345557888887765432 21222222333 45666666654 42 46778888899998
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~ 252 (334)
.++.+++++ ||.|++..+.|......+... +++++.++.+ |+++|++.+.+ +
T Consensus 105 ~~~~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~ 163 (388)
T PRK07337 105 LACLALVER--------------GDEVLMPDPSYPCNRHFVAAA----EGRPVLVPSGPAERFQLTAADVEAAWGE---R 163 (388)
T ss_pred HHHHHhcCC--------------CCEEEEeCCCchhhHHHHHHc----CCEEEEeecCCccCCcCCHHHHHhhcCc---c
Confidence 888887754 788888888888877666555 6777777642 56777777653 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++.+++||+|.+.+ +++|+++|+++++++|+||+|....+. +... ......++ -|++.||||.||..|
T Consensus 164 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~-~~~~~~~~-vi~~~S~SK~~~~~G~ 239 (388)
T PRK07337 164 TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYD--AAPV-SALSLGDD-VITINSFSKYFNMTGW 239 (388)
T ss_pred ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccC--CCCc-ChhhccCC-EEEEEechhhcCCchh
Confidence 788888999999999877 678889999999999999999853332 2111 11111122 267899999998766
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 240 RiG~~~~~ 247 (388)
T PRK07337 240 RLGWLVVP 247 (388)
T ss_pred heeeeecC
Confidence 888763
No 245
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.70 E-value=9.7e-17 Score=152.10 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=142.8
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~ 176 (334)
..|++||+||||-+. .-+|. +||+|.+++.+.. .-...+-.+. ++...++.++|++.+.. ..++|.+||++
T Consensus 44 lyDe~G~ryLD~f~Gi~tvslGH-chP~v~~a~~kQl~~l~H~t~~~~--~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsE 120 (442)
T KOG1404|consen 44 LYDEEGRRYLDAFGGIVTVSLGH-CHPDVVAAAVKQLKKLYHTTSGYL--NPPIHDLAEALVSKLPGDLKVVFFVNSGSE 120 (442)
T ss_pred EEcCCCceeehhhCCeEEEEcCC-CChHHHHHHHHhhhhhEEeecccc--CCcHHHHHHHHHHhCCCCceEEEEecCCch
Confidence 346888999997664 45777 5999999775432 1111111122 34556777777777653 44667799999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---cC---Cc--EEE------Eee--C-CC-
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---TK---MV--EVF------VYK--H-CD- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---~~---g~--~v~------~~~--~-~D- 238 (334)
||.++++.... .++.-|+|-....+|++....+.+... +. +. .+. +|+ . ++
T Consensus 121 ANelal~mar~-----------Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~ 189 (442)
T KOG1404|consen 121 ANELALKMARL-----------YTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSN 189 (442)
T ss_pred HHHHHHHHHHH-----------hcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCc
Confidence 99999985443 223468888888999987666555421 10 00 000 000 0 01
Q ss_pred --------HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c
Q 019931 239 --------MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A 304 (334)
Q Consensus 239 --------~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~ 304 (334)
.++|+.++.... .....++.|++.+..|.+.+ |++..++|+++|.++|.||+|+. +||+|..+ +
T Consensus 190 ~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG--fGRtG~~wgf 267 (442)
T KOG1404|consen 190 EEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG--FGRTGHMWGF 267 (442)
T ss_pred hhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc--cccccccccc
Confidence 245666665432 34568899999999998765 99999999999999999999995 89999654 5
Q ss_pred cccCCCCCccEEEecCcccccC---CccEEee
Q 019931 305 EQFNCERDVDICVGTLSKAAGC---QGGFIAC 333 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~---~GG~i~~ 333 (334)
++.++.|| |+ |++|++|. .|++|++
T Consensus 268 e~h~v~PD--Iv--TmAKgiGnG~Pl~AVvtt 295 (442)
T KOG1404|consen 268 ESHGVVPD--IV--TMAKGIGNGFPLGAVVTT 295 (442)
T ss_pred cccCCCcc--HH--HHHhhccCCCcceeeecC
Confidence 77888885 45 99999985 5676654
No 246
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.70 E-value=7.2e-16 Score=151.69 Aligned_cols=198 Identities=14% Similarity=0.085 Sum_probs=134.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHH----hcCCCCccccc--cCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAAR----HGMGPRGSALI--CGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~----~g~g~~~sr~~--~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ 180 (334)
+.++.|.+|. +|.. ++.+++++.+ ++.+...+... .+.....+++++ + +++|++ .+++++++++++..
T Consensus 26 ~~~iyld~~a-~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~ 101 (406)
T TIGR01814 26 NAVIYLDGNS-LGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHL 101 (406)
T ss_pred CCcEEecCCC-cCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHH
Confidence 3456676666 7765 8888886653 44333222211 222345556655 4 788864 46666777888787
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEE----EEee-C----CCHHHHHHHHhcCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEV----FVYK-H----CDMSHLKTLLSCCTM 251 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v----~~~~-~----~D~~~Le~~l~~~~~ 251 (334)
++.++.+++ +++++|+++...|.+....+.......|+++ +.++ . .|++++++.++...+
T Consensus 102 ~~~~~~~~~-----------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 170 (406)
T TIGR01814 102 LLASFYKPT-----------PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGD 170 (406)
T ss_pred HHHHhcCCc-----------CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCC
Confidence 787765431 1245788888999986655532111225554 2333 2 278899988865445
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccc-cCCcc
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAA-GCQGG 329 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~-G~~GG 329 (334)
++++|++++++|++|.+.|+++|.++|+++|+++++|++|++|.+. +++ ..++|++++|.+|.+ |+.||
T Consensus 171 ~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~---------id~~~~gvD~~~~s~hK~l~g~pG~ 241 (406)
T TIGR01814 171 DIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP---------LDLHDWGVDFACWCTYKYLNAGPGA 241 (406)
T ss_pred CeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc---------cccccCCCCEEEEcCccccCCCCCe
Confidence 7999999999999999999999999999999999999999987541 223 246899999999987 44554
Q ss_pred E
Q 019931 330 F 330 (334)
Q Consensus 330 ~ 330 (334)
+
T Consensus 242 ~ 242 (406)
T TIGR01814 242 G 242 (406)
T ss_pred E
Confidence 3
No 247
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.70 E-value=9.4e-16 Score=148.30 Aligned_cols=199 Identities=14% Similarity=0.063 Sum_probs=133.6
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~ai 182 (334)
++.++||++++ .....+|.+++++++.. ....+....|...+.+++.+.+.+..|. ++++++++++++...++
T Consensus 20 ~~~~i~l~~~~-p~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~ 97 (357)
T TIGR03539 20 PDGIVDLSVGT-PVDPVPPLIRAALAAAA-DAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLP 97 (357)
T ss_pred CCCeEEccCCC-CCCCCCHHHHHHHHHHH-hhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHH
Confidence 47789999876 33555788888776532 2223344456666666666666655442 45666777788877777
Q ss_pred HHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 183 VAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 183 ~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
.++ .+ +||.|+++.+.|..+...+... |++++.++ |++.++ . .++++|+++++
T Consensus 98 ~~l~~~--------------~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~--~~~~l~----~--~~~~~v~~~~p 151 (357)
T TIGR03539 98 TLLGLG--------------PGDTVVIPELAYPTYEVGALLA----GATPVAAD--DPTELD----P--VGPDLIWLNSP 151 (357)
T ss_pred HHHcCC--------------CCCEEEECCCCcHHHHHHHHhc----CCEEeccC--ChhhcC----c--cCccEEEEeCC
Confidence 766 34 3888999999988877776655 78877763 443332 1 36789999999
Q ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccc--cCCCCCccEEEecCcccccCCc---cEEee
Q 019931 262 FSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQ--FNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 262 ~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~--~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+||+|.+.+ +++|.++|+++|+++|+||+|....++......... .+...+..|+++||||.||+.| ||+++
T Consensus 152 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~ 231 (357)
T TIGR03539 152 GNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG 231 (357)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec
Confidence 999999887 667899999999999999999753332211111110 0111122489999999997655 88876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 232 ~ 232 (357)
T TIGR03539 232 D 232 (357)
T ss_pred C
Confidence 4
No 248
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.70 E-value=9.1e-16 Score=148.22 Aligned_cols=182 Identities=23% Similarity=0.183 Sum_probs=132.1
Q ss_pred CCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
.+|.+++++.++-. ..+.+....+....++++++++++++|.+ ..+++++|++||..++.++.... .
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~----------~ 101 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLA----------K 101 (371)
T ss_pred chHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhc----------c
Confidence 57888887765432 22233334566677789999999999975 35788999999999988765420 0
Q ss_pred CCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHH
Q 019931 201 DEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELV 275 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ 275 (334)
++++.|++....|.+....++.. |.+++.++. .|+++|++++++ ++++|++..+.|++|.+.|+++|.
T Consensus 102 ~~~~~vl~~~~~h~s~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~l~~I~ 174 (371)
T PRK13520 102 AEKPNIVVPESAHFSFDKAADML----GVELRRAPLDDDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDPIPELS 174 (371)
T ss_pred CCCceEEecCcchHHHHHHHHHc----CceEEEecCCCCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCCHHHHH
Confidence 13678888889999987776655 677777763 389999999975 466666556678899999999999
Q ss_pred HHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccc
Q 019931 276 KLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAA 324 (334)
Q Consensus 276 ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~ 324 (334)
++|+++|+++++|++|+.++++....+. .+.. ..++|.+..|.+|..
T Consensus 175 ~l~~~~g~~livD~a~~~~~~~~~~~~~--~~~~~~~~vd~~~~s~~K~~ 222 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFVIPFLDDPP--NFDFSLPGVDSITIDPHKMG 222 (371)
T ss_pred HHHHHcCCCEEEEecchhHHHHhhcCCC--CccccCCCCceEEECCcccc
Confidence 9999999999999999976542211111 1122 246788888899964
No 249
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.70 E-value=6.3e-16 Score=148.76 Aligned_cols=177 Identities=20% Similarity=0.125 Sum_probs=130.0
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--c-EEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--D-CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~-alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
-++++.+++.++..+ ++.. ......+++++.+++++|.+ . ++++++|++|+..++.+++.+
T Consensus 10 ~~~~v~~a~~~~~~~---~~~~-~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~------------ 73 (356)
T cd06451 10 VPPRVLKAMNRPMLG---HRSP-EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEP------------ 73 (356)
T ss_pred CCHHHHHHhCCCccC---CCCH-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCC------------
Confidence 468888887654332 1211 22456789999999999973 3 456688899999999888754
Q ss_pred CCCeEEEEcCCCchhh--HHHHHHhhhcCCcEEEEee-----CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHASI--IDGIRIAERTKMVEVFVYK-----HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~--~~g~~ls~~~~g~~v~~~~-----~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++....|.+. ...++.. |++++.++ +.|.+++++.+++ .++++|++.+++|++|.+.|+++
T Consensus 74 --g~~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~~~~ 145 (356)
T cd06451 74 --GDKVLVGVNGVFGDRWADMAERY----GADVDVVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNPLEG 145 (356)
T ss_pred --CCEEEEecCCchhHHHHHHHHHh----CCCeEEeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccCHHH
Confidence 77788777777652 3333333 67777765 3488999998864 26788888889999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccC-Cc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
|.++|+++|+++++|++|++|... +.+ ..++|++++|++|.|+. .| |+++.
T Consensus 146 i~~~a~~~~~~li~D~~~~~g~~~---------~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~ 199 (356)
T cd06451 146 IGALAKKHDALLIVDAVSSLGGEP---------FRMDEWGVDVAYTGSQKALGAPPGLGPIAF 199 (356)
T ss_pred HHHHHHhcCCEEEEeeehhccCcc---------ccccccCccEEEecCchhccCCCCcceeEE
Confidence 999999999999999999865321 111 12468999999999986 34 77765
No 250
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.70 E-value=1.9e-15 Score=148.46 Aligned_cols=205 Identities=13% Similarity=0.071 Sum_probs=139.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~ai 182 (334)
|.++++|..+. ..+..+|.+++++.+.- .+...+....|...+.+.+++.+++.+|. +++++++++++|+..++
T Consensus 32 ~~~~i~l~~g~-p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (402)
T PRK06107 32 GRSIVDLTVGE-PDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL 110 (402)
T ss_pred cCCEEEcCCCC-CCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 36788998876 35556788888765532 22233445567777888888888877664 34666677789999988
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~l 255 (334)
.+++.+ ||.|++..+++......+... +..++.++. .|+++|++.+++ ++++
T Consensus 111 ~~~~~~--------------gd~vl~~~p~y~~y~~~~~~~----~~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~ 169 (402)
T PRK06107 111 MATLEA--------------GDEVIIPAPYWVSYPDMVLAN----DGTPVIVACPEEQGFKLTPEALEAAITP---RTRW 169 (402)
T ss_pred HHhcCC--------------CCEEEEecCCCcCHHHHHHHc----CCEEEEecCCcccCCCCCHHHHHhhcCc---CceE
Confidence 877654 788888777666655555444 455555542 256788877753 6788
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHc-CCEEEEecCcccccccCCCcc-cccccCCCCCccEEEecCcccccCCc--
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKY-GFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~-ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
|++.+++||+|.+.+ +++|+++|+++ ++++|+||+|....+...... +.....-..+..|+++||||.||..|
T Consensus 170 v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (402)
T PRK06107 170 LILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWR 249 (402)
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccc
Confidence 888899999998887 56778889998 999999999986444321111 11110101123588999999998777
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 250 iG~~~~~ 256 (402)
T PRK06107 250 IGYAAGP 256 (402)
T ss_pred eeeeecC
Confidence 888764
No 251
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.70 E-value=7.9e-16 Score=148.09 Aligned_cols=186 Identities=18% Similarity=0.190 Sum_probs=141.2
Q ss_pred CHHHHHHHHHhc---CCCCccccccCc--hHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCc
Q 019931 125 HPTIAKAAARHG---MGPRGSALICGY--TNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEK 197 (334)
Q Consensus 125 ~p~v~~a~~~~g---~g~~~sr~~~G~--~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~ 197 (334)
+|+|++++..|- -|.++|-...|. ....++.++.+|++.|++ .++|+++|+++|..+|+.++...
T Consensus 14 ~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~-------- 85 (386)
T COG1104 14 DPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAY-------- 85 (386)
T ss_pred CHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhh--------
Confidence 789999765432 133333333343 356788999999999964 46667888999999998744321
Q ss_pred cCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH
Q 019931 198 SFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV 272 (334)
Q Consensus 198 ~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~ 272 (334)
....++..|++....|.++++.++... ..|.++.+.+.+ |+++|+++|++ +|.+|.+-.++|..|.+.|++
T Consensus 86 ~~~~~~~HIIts~iEH~aVl~~~~~Le-~~g~~Vtyl~V~~~G~v~~e~L~~al~~---~T~LVSim~aNnE~G~IQpI~ 161 (386)
T COG1104 86 RNAQKGKHIITSAIEHPAVLNTCRYLE-RQGFEVTYLPVDSNGLVDLEQLEEALRP---DTILVSIMHANNETGTIQPIA 161 (386)
T ss_pred hcccCCCeEEEcccccHHHHHHHHHHH-hcCCeEEEeCCCCCCeEcHHHHHHhcCC---CceEEEEEecccCeeecccHH
Confidence 011246678889999999999998773 337777777754 89999999985 799999999999999999999
Q ss_pred HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEE
Q 019931 273 ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 273 ~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i 331 (334)
+|.++|+++|+++++|.+|++|-+. .++. -.+|++..|-+|-.|+-| |++
T Consensus 162 ei~~i~k~~~i~fHvDAvQa~Gkip---------i~~~~~~vD~ls~SaHK~~GpkGiGaL 213 (386)
T COG1104 162 EIGEICKERGILFHVDAVQAVGKIP---------IDLEELGVDLLSFSAHKFGGPKGIGAL 213 (386)
T ss_pred HHHHHHHHcCCeEEEehhhhcCcee---------ccccccCcceEEeehhhccCCCceEEE
Confidence 9999999999999999999986431 2222 248999999999999866 544
No 252
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.70 E-value=6.8e-16 Score=149.86 Aligned_cols=156 Identities=20% Similarity=0.173 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||+++++++|.++++.++||+.|++.++.++.-+ +||.|++..+...+...++... |
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~-------------~gdeVi~p~~t~~~~~~ai~~~----G 86 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLG-------------PGDEVIVPAYTFPATASAILWA----G 86 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGG-------------TTSEEEEESSS-THHHHHHHHT----T
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCC-------------cCceEecCCCcchHHHHHHHHh----c
Confidence 5788999999999999999999999999999999986532 4899999999888888888877 8
Q ss_pred cEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcc
Q 019931 229 VEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 229 ~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g 302 (334)
++++.++.+ |++++++++++ ++++|++.+.+ |.++|+++|.++|+++|++||.|.||++|..- .|+.
T Consensus 87 ~~pv~~Di~~~~~~id~~~~~~~i~~---~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~-~g~~ 159 (363)
T PF01041_consen 87 AEPVFVDIDPETLNIDPEALEKAITP---KTKAILVVHLF---GNPADMDAIRAIARKHGIPLIEDAAQAFGARY-KGRP 159 (363)
T ss_dssp -EEEEE-BETTTSSB-HHHHHHHHHT---TEEEEEEE-GG---GB---HHHHHHHHHHTT-EEEEE-TTTTT-EE-TTEE
T ss_pred cEEEEEeccCCcCCcCHHHHHHHhcc---CccEEEEecCC---CCcccHHHHHHHHHHcCCcEEEccccccCcee-CCEe
Confidence 999988743 89999999986 78888877655 77899999999999999999999999987531 1221
Q ss_pred cccccCCCCCccEEEecC--ccccc-CCccEEeeC
Q 019931 303 VAEQFNCERDVDICVGTL--SKAAG-CQGGFIACR 334 (334)
Q Consensus 303 ~~~~~~~~~~~Div~~Sl--sKa~G-~~GG~i~~~ 334 (334)
.|-. -|+.+.|| +|.+. +.||+|+++
T Consensus 160 ----~G~~--gd~~~fSf~~~K~i~~geGG~v~~~ 188 (363)
T PF01041_consen 160 ----VGSF--GDIAIFSFHPTKIITTGEGGAVVTN 188 (363)
T ss_dssp ----TTSS--SSEEEEESSTTSSS-SSS-EEEEES
T ss_pred ----ccCC--CCceEecCCCCCCCcCCCCeeEEec
Confidence 1211 27888898 69985 468998864
No 253
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.70 E-value=1.3e-15 Score=152.39 Aligned_cols=204 Identities=15% Similarity=0.102 Sum_probs=141.0
Q ss_pred ceeEEEeecCcc-CCCCCCH---HHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDY-LGLSSHP---TIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~y-Lgl~~~p---~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
|..++++.+.+. .+|.++. .+.+++.+. ..|... ++......+||++++++++.++++++++|++|+..++
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~----Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~ 110 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEA----YAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILF 110 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcc----cCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHH
Confidence 478899988774 5787755 455544332 233322 2223345889999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---------------CCHHHHHHHHh
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---------------CDMSHLKTLLS 247 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---------------~D~~~Le~~l~ 247 (334)
.+++++ || |+...+.+.+....+.+. |++++.++. .|+++|+++++
T Consensus 111 ~all~p--------------GD-Vii~~p~~~~~~~~i~~~----G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~ 171 (460)
T PRK13238 111 PVLIKK--------------GD-VVPSNYHFDTTRAHIELN----GATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIE 171 (460)
T ss_pred HHhCCC--------------CC-EEccCCcccchHHHHHHc----CCEEEEEeccccccccccccccCCcCHHHHHHHHh
Confidence 998875 77 555555555555556666 777776542 47899999997
Q ss_pred cCC-CCcEEEEEcCCCCCCC-CccC---HHHHHHHHHHcCCEEEEecCcccc-c-ccC------CCccccccc-CCCCCc
Q 019931 248 CCT-MRKKVVVTDSLFSMDG-DFAP---MVELVKLRRKYGFLLVLDDAHGTF-V-CGK------NGGGVAEQF-NCERDV 313 (334)
Q Consensus 248 ~~~-~~~~lVv~e~v~n~~G-~~~p---L~~L~ela~k~ga~LivDeAh~~G-v-~G~------~G~g~~~~~-~~~~~~ 313 (334)
+.. +++++|++++++|++| .+.+ +++|+++|++||++||+|++|..+ . ++. .+..+.+.. -+....
T Consensus 172 ~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~ 251 (460)
T PRK13238 172 EVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYA 251 (460)
T ss_pred hcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccC
Confidence 542 3689999999999987 6655 678999999999999999998642 2 211 011111000 001235
Q ss_pred cEEEecCcccc-cCCccEEeeC
Q 019931 314 DICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 314 Div~~SlsKa~-G~~GG~i~~~ 334 (334)
|+++.|..|.+ +..||+|+++
T Consensus 252 D~~~~Sg~K~g~~~~GG~i~~~ 273 (460)
T PRK13238 252 DGLTMSAKKDAMVNIGGLLCFR 273 (460)
T ss_pred cEEEEecccCCCCcceeEEEcC
Confidence 78888988864 5579998863
No 254
>PRK08354 putative aminotransferase; Provisional
Probab=99.69 E-value=1.6e-15 Score=144.18 Aligned_cols=182 Identities=20% Similarity=0.169 Sum_probs=132.2
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhh
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~ 187 (334)
..+++|+.| +.+ .+|.+++++.+.-.... ++. ....|+++++++++. ++++++++++|+..++..+ .
T Consensus 8 ~~~i~l~~~~np~---~p~~~~~a~~~~~~~~~------~yp-~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~~~-~ 75 (311)
T PRK08354 8 EGLIDFSASVNPY---PPEWLDEMFERAKEISG------RYT-YYEWLEEEFSKLFGE-PIVITAGITEALYLIGILA-L 75 (311)
T ss_pred cceeEecCCCCCC---CCHHHHHHHHHHHHHhh------cCC-ChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHHhh-C
Confidence 468899998 443 25788887765322111 111 236789999999984 5777788888887766433 2
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCC
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGD 267 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~ 267 (334)
+ ||.|++..+.+..+...++.. |.+++.++ .|++.|++.++ ++++|++.+|+||+|.
T Consensus 76 ~--------------gd~vlv~~P~y~~~~~~~~~~----g~~~~~~~-~d~~~l~~~~~----~~~~vi~~~P~NPTG~ 132 (311)
T PRK08354 76 R--------------DRKVIIPRHTYGEYERVARFF----AARIIKGP-NDPEKLEELVE----RNSVVFFCNPNNPDGK 132 (311)
T ss_pred C--------------CCeEEEeCCCcHHHHHHHHHc----CCEEeecC-CCHHHHHHhhc----CCCEEEEecCCCCCCC
Confidence 3 788888889988888877776 78887664 57888888775 3467777888999999
Q ss_pred ccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 268 FAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 268 ~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+.+ +++|+++|+++|+++|+||+|...+++. .. ..++..|+++||||+||..| ||+++
T Consensus 133 ~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~--~~------~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 133 FYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP--ES------PEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred ccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc--cc------cCCCcEEEEeccHhhcCCccceeeeeee
Confidence 887 5667788899999999999998654432 11 11233589999999999877 88875
No 255
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.69 E-value=7.3e-16 Score=149.00 Aligned_cols=156 Identities=16% Similarity=0.217 Sum_probs=129.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...++|+++++++|.++++.++||+.|+..++++|.- ++||.|++......+..+.+... |
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~i-------------g~GDeVI~ps~TfvATan~i~~~----G 95 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAI-------------GPGDEVIVPSFTFVATANAVLLV----G 95 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCC-------------CCCCEEEecCCchHHHHHHHHHc----C
Confidence 477799999999999999999999999999999997651 35899999999999999998888 8
Q ss_pred cEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcc
Q 019931 229 VEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 229 ~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g 302 (334)
+++++++-+ |++.||+.|++ +||+|+.-+.+ |..+++++|.+||++||++||.|.||++|..- .|+.
T Consensus 96 a~PVFvDid~~T~nid~~~ie~aIt~---~tKAIipVhl~---G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y-~gk~ 168 (374)
T COG0399 96 AKPVFVDIDPDTLNIDPDLIEAAITP---RTKAIIPVHLA---GQPCDMDAIMALAKRHGLPVIEDAAQAHGATY-KGKK 168 (374)
T ss_pred CeEEEEecCCcccCCCHHHHHHHccc---CCeEEEEehhc---cCCCCHHHHHHHHHHcCCeEEEEcchhccCee-cCcc
Confidence 999888743 89999999986 68999877766 66999999999999999999999999988541 1322
Q ss_pred cccccCCCCCccEEEecC--cccccC-CccEEeeC
Q 019931 303 VAEQFNCERDVDICVGTL--SKAAGC-QGGFIACR 334 (334)
Q Consensus 303 ~~~~~~~~~~~Div~~Sl--sKa~G~-~GG~i~~~ 334 (334)
+. .+| |+.+.|| .|-+++ .||+|+++
T Consensus 169 vG-t~G-----d~~~fSF~~~K~ittgEGGav~tn 197 (374)
T COG0399 169 VG-SFG-----DIGAFSFHATKNLTTGEGGAVVTN 197 (374)
T ss_pred cc-ccc-----ceEEEEecCCCCccccCceEEEeC
Confidence 11 122 5777788 899965 69999864
No 256
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.69 E-value=8e-16 Score=149.73 Aligned_cols=155 Identities=23% Similarity=0.205 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|+++. .+++++++||++|+..++.+++++ ||.|++....|......+.......|
T Consensus 50 ~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~--------------Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 50 NPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRP--------------GDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred CccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCC--------------CCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 366799999999999 678999999999999999888764 77777765555554433322111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++.++... ..+ +++++|++++++||+|.+.|+++|.++|+++|+++++|++|... +|. . .
T Consensus 115 ~~v~~v~~~~~~~--~~~----~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~-~~~---~-----p 179 (366)
T PRK07582 115 VTVREAPTAGMAE--AAL----AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP-LGQ---R-----P 179 (366)
T ss_pred EEEEEECCCChHH--Hhc----cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc-ccc---C-----c
Confidence 8888888765432 222 37899999999999999999999999999999999999999743 221 1 1
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++||++.|++|++++ .+||+++
T Consensus 180 ~~~g~Divv~S~sK~l~G~~g~~~G~v~~ 208 (366)
T PRK07582 180 LELGADLVVASDTKALTGHSDLLLGYVAG 208 (366)
T ss_pred hhcCCcEEEecccccccCCCCeeEEEEEc
Confidence 123468999999999965 2477765
No 257
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.69 E-value=1.1e-15 Score=147.94 Aligned_cols=197 Identities=18% Similarity=0.187 Sum_probs=146.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh---cCCCCccc-cccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH---GMGPRGSA-LICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~---g~g~~~sr-~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai 182 (334)
.-|+|..+.. ..+|+|.+|+++| ..|.+.++ +.....+..++.++.+|++.|++ +++|++++|++|..++
T Consensus 44 ~vyld~~at~----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl 119 (428)
T KOG1549|consen 44 PVYLDNQATG----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVL 119 (428)
T ss_pred cEEEecCcCC----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHH
Confidence 4566655544 2589999998775 23444445 22222344788999999999964 4566678899999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv 257 (334)
+.+... +++ +....|++-...|.++..+++..... +.+++.++.+ |.+.+++.|+. +|++|.
T Consensus 120 ~~v~~~-----~~~----~~~k~iitl~~eH~~v~~s~~~l~~~-g~~Vt~lpv~~~~~~d~~~~~~~i~~---~T~lv~ 186 (428)
T KOG1549|consen 120 KGVARF-----FGD----KTKKHIITLQTEHPCVLDSCRALQEE-GLEVTYLPVEDSGLVDISKLREAIRS---KTRLVS 186 (428)
T ss_pred HHhhcc-----ccc----cccceEEEecccCcchhHHHHHHHhc-CeEEEEeccCccccccHHHHHHhcCC---CceEEE
Confidence 887642 100 01227888888999999999876433 6777777643 67777777764 899999
Q ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEE
Q 019931 258 TDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 258 ~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i 331 (334)
+.+++|+.|.+.|+++|.++|+++|+.+++|.||+.|.. ..++. -++|++..+.+|-||+.| |++
T Consensus 187 I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i---------~vDV~eln~D~~s~s~HK~ygp~~iGaL 253 (428)
T KOG1549|consen 187 IMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI---------PVDVQELNADFLSISAHKIYGPPGIGAL 253 (428)
T ss_pred EEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc---------cccHHHcCchheeeecccccCCCcceEE
Confidence 999999999999999999999999999999999998743 12232 567999999999999976 554
No 258
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.69 E-value=1e-15 Score=146.70 Aligned_cols=155 Identities=15% Similarity=0.168 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHh-hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVG-NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~-~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
..+...++|+++++++|.+.+++++||++|+..++.++. . ++|.|++..+.|.+....+...
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~--------------~gd~vl~~~~~~~~~~~~~~~~--- 78 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIG--------------PGDEVIVPSFTFVATANAILLL--- 78 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCC--------------CCCEEEeCCcchHHHHHHHHHc---
Confidence 346789999999999999999999999999999998873 3 3788999999999988777665
Q ss_pred CCcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 227 KMVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 227 ~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
|.+++.++. .|+++|++++++ ++++|++.+ ++|.+.|+++|.++|+++|++||+|++|++|.... +
T Consensus 79 -g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~-~ 150 (352)
T cd00616 79 -GATPVFVDIDPDTYNIDPELIEAAITP---RTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK-G 150 (352)
T ss_pred -CCeEEEEecCCCcCCcCHHHHHHhcCc---CCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC-C
Confidence 788877753 278888888753 678887654 57889999999999999999999999999875421 1
Q ss_pred cccccccCCCCCccEEEecCc--ccccC-CccEEee
Q 019931 301 GGVAEQFNCERDVDICVGTLS--KAAGC-QGGFIAC 333 (334)
Q Consensus 301 ~g~~~~~~~~~~~Div~~Sls--Ka~G~-~GG~i~~ 333 (334)
. ..+ ...|+.+.||+ |.++. .||++++
T Consensus 151 ~----~~~--~~~d~~~~S~~~~K~~~~~~gg~~~~ 180 (352)
T cd00616 151 R----KVG--TFGDAGAFSFHPTKNLTTGEGGAVVT 180 (352)
T ss_pred E----Ecc--cCcceeEEcCCCCCCCcccCceEEEE
Confidence 1 111 11367788877 99953 6787765
No 259
>PRK05839 hypothetical protein; Provisional
Probab=99.69 E-value=2.6e-15 Score=146.30 Aligned_cols=206 Identities=14% Similarity=0.036 Sum_probs=137.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~ 183 (334)
|+.+++|+.|+ ..+..++.+++++++...-...+....|...+.+.+.+.+++.+| .+++++++++.+|+..++.
T Consensus 23 ~~~~i~l~~~~-p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~ 101 (374)
T PRK05839 23 EYKGLDLTIGE-PQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQ 101 (374)
T ss_pred CCCeEEcCCCC-CCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHH
Confidence 47999999986 446667888888776433223344445655666667666666655 3456777777888877777
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~ 258 (334)
+++.. +++|.|++..+.+..+...++.. |++++.++.. +++..+..+ .++++|++
T Consensus 102 ~~~~~------------~~gd~vlv~~P~y~~~~~~~~~~----g~~v~~v~~~~~~~~~~d~~~~~~----~~~k~v~i 161 (374)
T PRK05839 102 FVLFD------------KQNPTIAYPNPFYQIYEGAAIAS----RAKVLLMPLTKENDFTPSLNEKEL----QEVDLVIL 161 (374)
T ss_pred HHhcC------------CCCCEEEECCCCchhhHHHHHhc----CCEEEEeecccccCCcCCcchhhh----ccccEEEE
Confidence 66421 13788888888887777776655 8888888753 122222222 25788888
Q ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccccccc---CC-CCCccEEEecCcccccCCc---
Q 019931 259 DSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF---NC-ERDVDICVGTLSKAAGCQG--- 328 (334)
Q Consensus 259 e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~---~~-~~~~Div~~SlsKa~G~~G--- 328 (334)
.+++||+|.+.+ +++|+++|+++|++||+||+|..-..+.....+.... +. ..+.-|+++||||+||..|
T Consensus 162 ~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 241 (374)
T PRK05839 162 NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRS 241 (374)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcccee
Confidence 899999999887 6678888999999999999998632211111111100 00 1122488999999998766
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
||++++
T Consensus 242 G~ii~~ 247 (374)
T PRK05839 242 GFIAGD 247 (374)
T ss_pred EEEecC
Confidence 898764
No 260
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.69 E-value=2.5e-15 Score=147.24 Aligned_cols=197 Identities=18% Similarity=0.161 Sum_probs=134.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-C---CCccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-G---PRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGFA 176 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g---~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~~ 176 (334)
..++||+.++ ..+..++.+++++.++-. . ...+....|. .++++.++++++ .+++++++++++
T Consensus 33 ~~~~~l~~g~-p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~ 107 (394)
T PRK06836 33 DNVFDFSLGN-PSVPPPAAVKEALRELAEEEDPGLHGYMPNAGY----PEVREAIAESLNRRFGTPLTADHIVMTCGAAG 107 (394)
T ss_pred CCeEEecCcC-CCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCC----HHHHHHHHHHHHHHhCCCCCcCcEEEeCChHH
Confidence 4678997764 455557788887765422 1 1222233444 445555555542 356778888889
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCT 250 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~ 250 (334)
++..++.+++.+ ||.|++..+.+......+... |.+++.++.+ |+++|++++++
T Consensus 108 al~~~~~~l~~~--------------gd~Vli~~p~~~~~~~~~~~~----g~~v~~v~~~~~~~~~d~~~l~~~~~~-- 167 (394)
T PRK06836 108 ALNVALKAILNP--------------GDEVIVFAPYFVEYRFYVDNH----GGKLVVVPTDTDTFQPDLDALEAAITP-- 167 (394)
T ss_pred HHHHHHHHhcCC--------------CCEEEEcCCCCccHHHHHHHc----CCEEEEEecCCccCcCCHHHHHhhcCc--
Confidence 998888888764 777777777776655554444 7888887642 67888888854
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHH------cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRK------YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k------~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls 321 (334)
++++|++.+++||+|.+.| +++|+++|++ ||+++|+||+|....++ +......... .+..|+++|||
T Consensus 168 -~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~-~~~~i~~~S~S 243 (394)
T PRK06836 168 -KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD--GAEVPYIFKY-YDNSIVVYSFS 243 (394)
T ss_pred -CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC--CCCCCChHHc-cCcEEEEecch
Confidence 6888888899999999988 6677888998 89999999999865443 2111111111 12358999999
Q ss_pred ccccCCc---cEEeeC
Q 019931 322 KAAGCQG---GFIACR 334 (334)
Q Consensus 322 Ka~G~~G---G~i~~~ 334 (334)
|.||..| ||++++
T Consensus 244 K~~~~pGlRiG~~~~~ 259 (394)
T PRK06836 244 KSLSLPGERIGYIAVN 259 (394)
T ss_pred hhccCcceeeEEEecC
Confidence 9999766 888763
No 261
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.68 E-value=1.2e-15 Score=151.35 Aligned_cols=195 Identities=17% Similarity=0.093 Sum_probs=135.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC----C-CcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK----K-EDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~-e~alv~~sG~~An~~ai~ 183 (334)
...++|++++ ......|.+.+++++.......+....| ..+|.+.++++++ . +++++++++.+|+..++.
T Consensus 85 ~~~i~L~~g~-p~~~~~p~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~ 159 (431)
T PRK15481 85 TPLHDLAGGN-PDPQRLPDLSRYFARLSRTPRLYGDAPV----SPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLC 159 (431)
T ss_pred chhhhhhcCC-CChhHhHHHHHHHHHhhhhhhhcCCcCC----CHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHH
Confidence 3466777764 3444456677766653222111222223 3456677777754 2 367777888999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCcEEEEEc
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~~lVv~e 259 (334)
+++.+ ||.|++..+.+......++.. |++++.++. .|+++|+++++. ++++|++.
T Consensus 160 ~l~~p--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~g~~~~~l~~~~~~---~~k~i~~~ 218 (431)
T PRK15481 160 AHLLP--------------GDSVAVEDPCFLSSINMLRYA----GFSASPVSVDAEGMQPEKLERALAQ---GARAVILT 218 (431)
T ss_pred HhCCC--------------CCEEEEeCCCcHHHHHHHHHc----CCeEEeeccCCCCCCHHHHHHHHhc---CCCEEEEC
Confidence 88875 788998888888887777766 888888764 368888888864 56776665
Q ss_pred -CCCCCCCCccCHH---HHHHHHHHc-CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEE
Q 019931 260 -SLFSMDGDFAPMV---ELVKLRRKY-GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 260 -~v~n~~G~~~pL~---~L~ela~k~-ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i 331 (334)
+++||+|.+.+.+ +|.++|+++ +++||+||+|....+.+ .... .....+..|+++||||+|| .| ||+
T Consensus 219 p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~-~~~~---~~~~~~~vi~~~SfSK~~~-~GlRiG~~ 293 (431)
T PRK15481 219 PRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSP-YHSV---IPQTTQRWALIRSVSKALG-PDLRLAFV 293 (431)
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCC-CCCC---CcCCCCCEEEEeeeccccC-CCceeEEE
Confidence 9999999999865 899999999 99999999998643221 0111 1112223489999999999 66 888
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 294 i~~ 296 (431)
T PRK15481 294 ASD 296 (431)
T ss_pred eCC
Confidence 764
No 262
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=1.5e-15 Score=146.06 Aligned_cols=190 Identities=13% Similarity=0.051 Sum_probs=135.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCC-CCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMG-PRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al 185 (334)
+.+++|+.|+. .+..+|.+++++.++-.. ...+ ... -..+|++++|++++. +++++++++++++..++.++
T Consensus 24 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~y----~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l 97 (353)
T PRK05387 24 AKLIKLNTNEN-PYPPSPKVLEAIRAALGDDLRLY----PDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAF 97 (353)
T ss_pred cceeeccCCCC-CCCCCHHHHHHHHHHhhhhhhcC----CCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh
Confidence 67899999863 465678888887654321 1111 111 236899999999985 45788888899999999988
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
+.+ ||.|++..+.|.......... |.+++.++.. |+++++ + ++++|++.+
T Consensus 98 ~~~--------------gd~vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~---~----~~~~v~~~~ 152 (353)
T PRK05387 98 FNH--------------DRPLLFPDITYSFYPVYAGLY----GIPYEEIPLDDDFSIDVEDYL---R----PNGGIIFPN 152 (353)
T ss_pred cCC--------------CCEEEEeCCCHHHHHHHHHHc----CCEEEEeecCCCCCCCHHHHH---h----cCCEEEEeC
Confidence 765 788888888876665555555 7787777643 455554 2 346788889
Q ss_pred CCCCCCCccCHHHHHHHHHHc-CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKY-GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~-ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.|.+++.++++++ ++++|+||+|.. ++. ..........+ ..|+++||||.||..| ||++++
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~--~~~--~~~~~~~~~~~-~~i~~~S~SK~~~~~GlR~G~~~~~ 225 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYVD--FGG--ESAIPLIDRYP-NLLVVQTFSKSRSLAGLRVGFAIGH 225 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccc--cCC--cchHHHHhhCC-CEEEEEehhHhhcchhhhceeeecC
Confidence 999999999999999999886 999999999963 432 11111111112 3599999999999877 998764
No 263
>PRK06855 aminotransferase; Validated
Probab=99.68 E-value=3.5e-15 Score=148.25 Aligned_cols=205 Identities=13% Similarity=0.079 Sum_probs=133.8
Q ss_pred ceeEEEeecCc--cCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHH
Q 019931 108 FKRLLLFSGND--YLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANM 179 (334)
Q Consensus 108 g~~~l~f~sn~--yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~ 179 (334)
|++++++...+ +.++..++.+++++.+... ...++....|...+.+.+.+.+.+..| .+++++++++.+|+.
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~ 110 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIA 110 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHH
Confidence 36777775544 3478888888887766432 222344445555555555555544434 246778888888888
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~ 252 (334)
.++. ++.+ ||.|++..+.+.......... .+.+++.++. .|+++|+++++.. ++
T Consensus 111 ~~~~-l~~~--------------Gd~Vlv~~P~Y~~~~~~~~~~---~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~ 171 (433)
T PRK06855 111 KIYG-LLRR--------------EARVIGPSPAYSTHSSAEAAH---AGYPPVTYRLDPENNWYPDLDDLENKVKYN-PS 171 (433)
T ss_pred HHHH-hcCC--------------CCeEEEeCCCCchHHHHHHHh---cCCeEEEEecccccCCCCCHHHHHHHHhcC-CC
Confidence 7774 5554 788888877776543221211 1566665542 2789999988642 25
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCC-ccEEEecCcccccCCc
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD-VDICVGTLSKAAGCQG 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~-~Div~~SlsKa~G~~G 328 (334)
++++++.+++||+|.+.+ +++|+++|++||++||.||+|....+.. ........+.++ ..|+++||||+|++.|
T Consensus 172 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 172 IAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 677777799999999988 6678889999999999999998765532 111111112122 2389999999998766
Q ss_pred ---cEEee
Q 019931 329 ---GFIAC 333 (334)
Q Consensus 329 ---G~i~~ 333 (334)
||+++
T Consensus 250 lRiG~ii~ 257 (433)
T PRK06855 250 SRCGWIEV 257 (433)
T ss_pred ceEEEEEE
Confidence 88875
No 264
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=3.8e-16 Score=147.53 Aligned_cols=200 Identities=18% Similarity=0.137 Sum_probs=144.6
Q ss_pred EEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhh
Q 019931 112 LLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASL 191 (334)
Q Consensus 112 l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~ 191 (334)
++|.|.++-|- +|++++++.+...+ ..-.+|..+...++|+++++++|++.++|++|||+||+.+|.+.+++
T Consensus 2 ~~f~SDn~~g~--~~~m~eam~~a~~~---~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~--- 73 (342)
T COG2008 2 IDFRSDNVAGP--TPEMREALAAANAV---GDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQP--- 73 (342)
T ss_pred CccccCccCCC--CHHHHHHHHhcccc---CCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCC---
Confidence 57888876654 89999988776522 12378999999999999999999988999999999999999999875
Q ss_pred ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCC---CCcEEEEEcCCCCC
Q 019931 192 LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCT---MRKKVVVTDSLFSM 264 (334)
Q Consensus 192 ~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~---~~~~lVv~e~v~n~ 264 (334)
++.|++....|......-.......+.++...+- .++++++..++... ..+.+++.++..+.
T Consensus 74 -----------~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te 142 (342)
T COG2008 74 -----------GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATE 142 (342)
T ss_pred -----------CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCC
Confidence 7889999988876543222222122344444442 38999999887521 35667777777767
Q ss_pred CCCccCH---HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCcc-EEee
Q 019931 265 DGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGG-FIAC 333 (334)
Q Consensus 265 ~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG-~i~~ 333 (334)
.|.+.|+ ++|.++||++|+.|++|.|.-+..+-.-| .. .......+|++..++||..+..+| +|++
T Consensus 143 ~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~-~~~~~~~~D~v~~~~tK~g~~~~gAiv~g 212 (342)
T COG2008 143 GGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG--VA-LKTIKSYVDSVSFCLTKGGGAPVGAIVFG 212 (342)
T ss_pred CceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CC-HHHHHhhCCEEEEecccCCcceeeeEEEc
Confidence 8999995 56788999999999999987543321111 11 112236789999999999987654 4444
No 265
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=2.2e-15 Score=147.21 Aligned_cols=195 Identities=19% Similarity=0.162 Sum_probs=136.3
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al 185 (334)
+.++|+|..|. -.+..+|.+++++.+... . ++ +.. +...+|+++++++++.+ .+++++++++++..++.++
T Consensus 51 ~~~~i~l~~n~-~p~~~~~~v~~a~~~~~~-~--~~--Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~ 123 (380)
T PLN03026 51 PEDIVKLDANE-NPYGPPPEVLEALGNMKF-P--YV--YPD-PESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV 123 (380)
T ss_pred ccceEEccCCC-CCCCCCHHHHHHHHhhHh-h--cc--CCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh
Confidence 36889999985 235567888887764211 0 11 111 22478999999999854 4566666677888888777
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
+.+ ||.|++..+.+......++.. |++++.++.+ |+++|+++++. +++++|++++
T Consensus 124 ~~~--------------gd~Vlv~~P~y~~y~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~~~~--~~~~~v~l~~ 183 (380)
T PLN03026 124 LDP--------------GDKIIDCPPTFGMYVFDAAVN----GAEVIKVPRTPDFSLDVPRIVEAVET--HKPKLLFLTS 183 (380)
T ss_pred cCC--------------CCEEEEcCCChHHHHHHHHHc----CCEEEEeecCCCCCcCHHHHHHHHhc--cCCcEEEEeC
Confidence 654 777887777766555444444 7888877642 67888887732 3688999999
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.|.+++.++++.. +++|+||+|..... .+... .... ..+..|++.||||+||..| ||++++
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~--~~~~~-~~~~-~~~~viv~~SfSK~~glaGlRiGy~~~~ 255 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFST--QESRM-KWVK-KYDNLIVLRTFSKRAGLAGLRVGYGAFP 255 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcC--CcchH-HHHH-hCCCEEEEecchHhhcCccccceeeecC
Confidence 999999999999999999865 89999999975322 12111 1111 1123589999999999888 998864
No 266
>PRK09105 putative aminotransferase; Provisional
Probab=99.68 E-value=1.8e-15 Score=147.34 Aligned_cols=194 Identities=15% Similarity=0.122 Sum_probs=137.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
+.+++|..|. -.+..+|.+++++.+.-.... + ++... ..+|++.+++++|. +++++++++++++..++.+++
T Consensus 43 ~~~i~l~~~~-~~~~~~~~~~~a~~~~~~~~~--~--Y~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~ 116 (370)
T PRK09105 43 EGAVFLNANE-CPLGPSPAARDAAARSAALSG--R--YDLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFT 116 (370)
T ss_pred CCcEEecCCC-CCCCCCHHHHHHHHHHHHHhc--C--CCCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHc
Confidence 5677888876 356678999997765421111 1 22223 57899999999884 567888888999999998887
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ ||.|++..+.|......++.. |.+++.++.. |++.+++. .+++++|++.++
T Consensus 117 ~~--------------gd~Vli~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~----~~~~~~v~l~nP 174 (370)
T PRK09105 117 SP--------------TAGLVTADPTYEAGWRAADAQ----GAPVAKVPLRADGAHDVKAMLAA----DPNAGLIYICNP 174 (370)
T ss_pred CC--------------CCEEEEeCCChHHHHHHHHHc----CCeEEEecCCCCCCCCHHHHHhc----CCCCCEEEEeCC
Confidence 64 788888888888877776666 7888877642 55555543 136788888999
Q ss_pred CCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+||+|.+.+.++|.++++. ++++||+||+|.. ++. +......... .+.-|++.||||+||..| ||++++
T Consensus 175 ~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~--f~~-~~s~~~~~~~-~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 175 NNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIH--FSD-APSVVDLVAQ-RKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHH--hcc-CcchHHHHhh-CCCEEEEecccHhhcCCccceeeeecC
Confidence 9999999998888887764 4899999999964 322 1111111111 122378899999999988 998864
No 267
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.68 E-value=1.8e-15 Score=147.05 Aligned_cols=198 Identities=16% Similarity=0.088 Sum_probs=135.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
..+++|+.|.. .+..+|.+++++.+....... ++.... .+|++.++++++.+ ++++++++++++..++.+++
T Consensus 36 ~~~i~l~~~~~-~~~~~~~~~~al~~~~~~~~~----Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~ 109 (371)
T PRK05166 36 PRIAKLGSNEN-PLGPSPAVRRAFADIAELLRL----YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVICRAVL 109 (371)
T ss_pred cceEEcCCCCC-CCCCCHHHHHHHHHHHHHhhc----CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc
Confidence 57899998853 245678888877653211111 111122 37999999999853 46666777778877877776
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ ||.|++..+.+......++.. |.+++.++.. |++++++.+++ ++++|++.++
T Consensus 110 ~~--------------gd~vli~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p 168 (371)
T PRK05166 110 RP--------------GDRVVTLYPSFPLHEDYPTMM----GARVERVTVTPDLGFDLDALCAAVAR---APRMLMFSNP 168 (371)
T ss_pred CC--------------CCEEEEcCCChHHHHHHHHHc----CCeEEEeecCCCCCCCHHHHHHhhhc---CCCEEEEeCC
Confidence 54 788888888777666555555 7888777653 68888888764 5788889999
Q ss_pred CCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 262 FSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+||+|.+.|.+++.++++. .++++|+||+|.....+...........-..+..|+++||||.||..| ||+++
T Consensus 169 ~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 169 SNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec
Confidence 9999999998777776664 478999999998654332111111111111112488999999999877 89653
No 268
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=1.2e-15 Score=149.26 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++++++.|.+.+++|+||+.|+.+++.++.++ ||.|++....++.............|
T Consensus 63 ~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~--------------GD~Vl~~~~~yg~t~~~~~~~~~~~G 128 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKK--------------GKRILSISDLYGQTFYFFNKVLKTLG 128 (384)
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEecCccchHHHHHHHHHHhcC
Confidence 4778999999999999999999999999999999988764 77777654433333322211111237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
++++.++.++.+.++ +.. .++++|++|++.|+++.++|+++|.++|++++ +++|.+++.+..++ .
T Consensus 129 i~v~fvd~~~~~~~~--l~~--~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~---------p 193 (384)
T PRK06434 129 IHVDYIDTDRLNSLD--FDP--SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQN---------P 193 (384)
T ss_pred cEEEEECCCChhhee--ecC--CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCC---------c
Confidence 888888876555554 322 36899999999999999999999999999998 56799987654322 2
Q ss_pred CCCCccEEEecCcccccC----CccEEee
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+..++|+++.|.+|.+++ .||+|++
T Consensus 194 l~~gaDivv~S~tK~i~G~~d~~gG~vv~ 222 (384)
T PRK06434 194 LDLGADVVIHSATKYISGHSDVVMGVAGT 222 (384)
T ss_pred hhcCCCEEEeecccccCCCCCceEEEEec
Confidence 234679999999999964 3788765
No 269
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.68 E-value=4.1e-16 Score=147.07 Aligned_cols=192 Identities=20% Similarity=0.210 Sum_probs=137.9
Q ss_pred EeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhc
Q 019931 113 LFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLL 192 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~ 192 (334)
||.|.+ .+|++.+++.+...|.- .+|..+...+||+++++++|.|.+++++||++||..++++++++
T Consensus 1 Df~SD~-----~~~~m~~a~~~a~~gd~----~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~---- 67 (290)
T PF01212_consen 1 DFRSDT-----PTPAMLEAMAAANVGDD----AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRP---- 67 (290)
T ss_dssp EES-SS-----S-HHEEHHHHHTTSB-C----CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHT----
T ss_pred CCCccC-----CCHHHHHHHHccccCCc----ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhc----
Confidence 455655 68999998876665542 47888999999999999999999999999999999999999865
Q ss_pred cCCCccCCCCCeEEEEcCCCchhhH--HHH-HHhhhcCCcEEEEeeC-----CCHHHHHHHHhcC---CCCcEEEEEcCC
Q 019931 193 AGDEKSFKDEKIAIFSDALNHASII--DGI-RIAERTKMVEVFVYKH-----CDMSHLKTLLSCC---TMRKKVVVTDSL 261 (334)
Q Consensus 193 ~~~~~~~~~~gd~Vl~d~~~H~s~~--~g~-~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~---~~~~~lVv~e~v 261 (334)
++.|++....|.... .+. .++ |.+++.++. .|+++|++.+++. ..++++|.++.+
T Consensus 68 ----------~~~vi~~~~aHi~~~E~ga~~~~~----G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t 133 (290)
T PF01212_consen 68 ----------GESVICADTAHIHFDETGAIEELS----GAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENT 133 (290)
T ss_dssp ----------TEEEEEETTEHHHHSSTTHHHHHT----TCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESS
T ss_pred ----------CCceeccccceeeeeccchhhHhc----CcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEec
Confidence 677888877776532 222 234 788887753 3799999999873 246789999988
Q ss_pred CCC-CCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 262 FSM-DGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 262 ~n~-~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
.+. .|.+.+ |++|.++|++||+.|++|.|.-+-..-..+..+.+.. ..+|++..|++|.+|+ .|++++++
T Consensus 134 ~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~Gavl~~~ 208 (290)
T PF01212_consen 134 TELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPGGAVLAGN 208 (290)
T ss_dssp BTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSSEEEEEES
T ss_pred CcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEcccccccceEEEec
Confidence 886 477766 6678889999999999999865332211112222222 5689999999999988 56777654
No 270
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=3.3e-15 Score=144.31 Aligned_cols=195 Identities=22% Similarity=0.163 Sum_probs=130.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al 185 (334)
+.++++|+.|+ ..+..+|.+++++.+.......+. ..| ..+|++.++++++. +++++++++.+++..++.++
T Consensus 29 ~~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~-~~~----~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~ 102 (357)
T PRK14809 29 PDDLVKLSSNE-NPHGPSPAAVEAIREAAERVHSYP-KAS----HADLTAALADRWDVSPEQVWLANGGDGALDYLARAM 102 (357)
T ss_pred ccceeEecCCC-CCCCCCHHHHHHHHHHHhhhhcCC-CCC----HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh
Confidence 36799999986 245567888887765432212221 122 36788999999874 45677788888998888888
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEEEEE
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lVv~ 258 (334)
+++ ||.|++..+.+.......... +.+++.++.. |.+++++.. .++++|++
T Consensus 103 ~~~--------------gd~V~v~~P~y~~~~~~~~~~----g~~~~~~~l~~~~~~~~~~~~~~~~~----~~~k~i~l 160 (357)
T PRK14809 103 LDP--------------GDTVLVPDPGFAYYGMSARYH----HGEVREYPVSKADDFEQTADTVLDAY----DGERIVYL 160 (357)
T ss_pred cCC--------------CCEEEEeCCChHHHHHHHHHc----CCeEEEEecccCcCCCcCHHHHHHhh----cCCcEEEE
Confidence 765 788888777665444434443 6666666531 333443332 25678888
Q ss_pred cCCCCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++++||+|.+.+.+++.++++.. ++++|+||+|..... .+... ..... .+.-|+++||||.||+.| ||+++
T Consensus 161 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~--~~~~~-~~~~~-~~~vi~~~SfSK~~~~~GlRiG~~~~ 236 (357)
T PRK14809 161 TSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE--RPSAV-ALVEE-RDDVAVLRTFSKAYGLAGLRLGYAVV 236 (357)
T ss_pred eCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC--CchhH-HHHhh-CCCEEEEecchhHhcCcchhheeeec
Confidence 89999999999988877777654 789999999986432 12111 11111 122488999999999888 99886
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 237 ~ 237 (357)
T PRK14809 237 P 237 (357)
T ss_pred C
Confidence 4
No 271
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.67 E-value=2e-15 Score=147.18 Aligned_cols=159 Identities=16% Similarity=0.137 Sum_probs=122.8
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
.+...+||+++++++|.+++++++||++|+..++.++ .+ +||.|++..+.|.+....+...
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~--------------~Gd~Viv~~~~~~~~~~~~~~~---- 89 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVG--------------PGDRVWTTPITFVATANCALYC---- 89 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCC--------------CCCEEEeCCcchHHHHHHHHHc----
Confidence 3567899999999999999999999999999999887 44 3888999888888877766655
Q ss_pred CcEEEEeeC------CCHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 228 MVEVFVYKH------CDMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 228 g~~v~~~~~------~D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
|++++.++. .|++++++++++.+ +++++|+.. ++.|...|+++|.++|++||++||+|++|++|.. -.|
T Consensus 90 G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~~ 165 (380)
T TIGR03588 90 GAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YGG 165 (380)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cCC
Confidence 888888764 38899999987321 257777754 3568899999999999999999999999998743 112
Q ss_pred cccccccCCCCCccEEEecCc--ccccC-CccEEee
Q 019931 301 GGVAEQFNCERDVDICVGTLS--KAAGC-QGGFIAC 333 (334)
Q Consensus 301 ~g~~~~~~~~~~~Div~~Sls--Ka~G~-~GG~i~~ 333 (334)
. ..+.....|+.+.||+ |.++. .||+++.
T Consensus 166 ~----~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~ 197 (380)
T TIGR03588 166 K----PVGNCRYADATVFSFHPVKIITTAEGGAVTT 197 (380)
T ss_pred E----eCCCccccceEEEecCCCCcccccCceEEEE
Confidence 1 1121113489999987 88854 7888765
No 272
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.66 E-value=3.7e-15 Score=145.54 Aligned_cols=158 Identities=16% Similarity=0.215 Sum_probs=120.7
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA 223 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls 223 (334)
.+|..+..+++|+.+++++|.+++++++||++|+..++.++ .+ +||.|++..+.|.+....+...
T Consensus 26 ~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~--------------pGd~Viv~~~t~~~~~~~~~~~ 91 (376)
T TIGR02379 26 LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQ--------------PGDEVIMPSYTFVSTANAFVLR 91 (376)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCC--------------CcCEEEECCCCcHHHHHHHHHc
Confidence 34456788999999999999999999999999998888776 33 3889999999998887777666
Q ss_pred hhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccccc
Q 019931 224 ERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCG 297 (334)
Q Consensus 224 ~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G 297 (334)
|++++.++.+ |++++++++++ ++++|+. .+++|...|+++|.++|++||++||+|++|+.|..
T Consensus 92 ----G~~~v~vd~d~~~~~~d~~~le~~i~~---~tk~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~- 160 (376)
T TIGR02379 92 ----GAKIVFVDIRPDTMNIDETLIESAITH---RTKAIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST- 160 (376)
T ss_pred ----CCEEEEEecCCCcCCCCHHHHHHhcCc---CceEEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-
Confidence 8888887642 67888888764 6888874 45679999999999999999999999999998741
Q ss_pred CCCcccccccCCCCCccEEEecCc--ccc--cCCccEEee
Q 019931 298 KNGGGVAEQFNCERDVDICVGTLS--KAA--GCQGGFIAC 333 (334)
Q Consensus 298 ~~G~g~~~~~~~~~~~Div~~Sls--Ka~--G~~GG~i~~ 333 (334)
..|.. .+. -.|+.+.||+ |.+ |..||+|++
T Consensus 161 ~~~~~----~g~--~~~~~~fSf~~~K~l~~g~~gG~v~~ 194 (376)
T TIGR02379 161 YKGRA----LGS--IGHLGTFSFHETKNYTSGGEGGALLI 194 (376)
T ss_pred cCCcc----cCC--CCCEEEEeCCCCCcCcccCCceEEEE
Confidence 11221 111 1255555663 655 347898765
No 273
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.66 E-value=3.6e-15 Score=144.19 Aligned_cols=159 Identities=16% Similarity=0.142 Sum_probs=118.0
Q ss_pred hHHHHHHHHHHHhHhCCC----cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhh-HHHHHHh
Q 019931 149 TNYHRLLESCLADLKKKE----DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASI-IDGIRIA 223 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e----~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~-~~g~~ls 223 (334)
....+++++.+++++|++ .+++++||+.++..++.++..+ ++++|+....+|... ...++..
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~~~a~~~ 100 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPK-------------DGKLLVVINGAYGARIVQIAEYL 100 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCC-------------CCeEEEEeCChhhHHHHHHHHHc
Confidence 456788999999999975 2556689999999999887654 255666565565553 2222222
Q ss_pred hhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 224 ERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 224 ~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
|.+++.++. .|++++++++++.+ ++++|.+.++.|++|.+.|+++|.++|++||+++++|++|++|...
T Consensus 101 ----g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~- 174 (363)
T TIGR02326 101 ----GIPHHVVDTGEVEPPDVVEVEAILAADP-AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIP- 174 (363)
T ss_pred ----CCceEEEeCCCCCCCCHHHHHHHHhhCC-CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcc-
Confidence 666666653 38899999987532 4567888888999999999999999999999999999999865321
Q ss_pred CCcccccccCCC-CCccEEEecCcccc-cCCc-cEEeeC
Q 019931 299 NGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIACR 334 (334)
Q Consensus 299 ~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~~ 334 (334)
.++. .++|++++|++|++ |+.| |++.++
T Consensus 175 --------~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~ 205 (363)
T TIGR02326 175 --------IDIAELHIDYLISSANKCIQGVPGFGFVIAR 205 (363)
T ss_pred --------cchhhcCccEEEecCccccccCCcceEEEEC
Confidence 1222 35789999999998 5567 887653
No 274
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.66 E-value=4.7e-15 Score=142.06 Aligned_cols=181 Identities=18% Similarity=0.017 Sum_probs=127.4
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhh
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~ 187 (334)
.++++|++| +.++.+..+...+++..|-. +. .+|+++|+++++.+++++++++.+|+..++. +.
T Consensus 20 ~~~i~l~~ne~p~~~~~~~~~~~~~~~yp~---------~~----~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~~--~~ 84 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVPAIPADAWARLPE---------TD----DGLEAAARAYYGAPQLLPVAGSQAAIQALPR--LR 84 (330)
T ss_pred HHheeecCCcCCCCCCCcccCHHHHHhCCC---------Ch----HHHHHHHHHHhCCCCEEECcCHHHHHHHHHH--cc
Confidence 357899999 66777644322223333321 11 5789999999999988888888888776642 33
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCC
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGD 267 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~ 267 (334)
+||.|++..+.+......++.. |++++.++. ++++++++ +++++++.+|+||+|.
T Consensus 85 --------------~gd~v~v~~P~y~~~~~~~~~~----g~~~~~v~~---~~~~~~~~----~~~~v~l~nP~NPTG~ 139 (330)
T PRK05664 85 --------------APGRVGVLSPCYAEHAHAWRRA----GHQVRELDE---AEVEAALD----SLDVLVVVNPNNPTGR 139 (330)
T ss_pred --------------CCCEEEEcCCChHHHHHHHHHc----CCeEEEech---hhHhhhhc----CCCEEEEeCCcCCCCC
Confidence 3788888888888887777766 888888864 35566553 4567777789999999
Q ss_pred ccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 268 FAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 268 ~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+.+ +++|+++|+++|+++|+||+|.... + ...+. .+...++ -|+++||||+||..| ||++++
T Consensus 140 ~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~--~-~~s~~-~~~~~~~-vi~~~SfSK~~gl~GlRiG~~v~~ 207 (330)
T PRK05664 140 RFDPARLLAWHARLAARGGWLVVDEAFMDNT--P-QHSLA-ACAHRPG-LIVLRSFGKFFGLAGARLGFVLAE 207 (330)
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEECCcccCC--C-ccccc-ccccCCC-EEEEeeccccccCCCcceEEEEeC
Confidence 988 4556667789999999999996431 1 11111 1111122 388999999999888 999874
No 275
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.66 E-value=6.6e-15 Score=148.16 Aligned_cols=191 Identities=13% Similarity=0.121 Sum_probs=128.1
Q ss_pred CHHHHHHHHHh----cCCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHHHHh-hhhhhccCC
Q 019931 125 HPTIAKAAARH----GMGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIVAVG-NIASLLAGD 195 (334)
Q Consensus 125 ~p~v~~a~~~~----g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~al~-~~~~~~~~~ 195 (334)
+..+++++.++ +.+...+....|...+.+.+.+.+.+..| .+++++++++++|+..++.+++ .+
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~------- 162 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDP------- 162 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCC-------
Confidence 34566655432 21223344445554444444444444333 3567888888999999999887 44
Q ss_pred CccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC---CCcEEEEEcCCCCCC
Q 019931 196 EKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT---MRKKVVVTDSLFSMD 265 (334)
Q Consensus 196 ~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~ 265 (334)
||.|++..+.+..+...+++. |++++.++. .|+++|++.+++.. .++++|++.+++||+
T Consensus 163 -------gD~Vlv~~P~y~~y~~~~~~~----g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPT 231 (481)
T PTZ00377 163 -------SDGVMIPIPQYPLYSAAITLL----GGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPT 231 (481)
T ss_pred -------CCEEEECCCCchhHHHHHHHc----CCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCC
Confidence 888999999988888777776 777777753 26799999886421 257877777999999
Q ss_pred CCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCc--ccccc-cCCCCC-----ccEEEecCcccc-cCCc---cE
Q 019931 266 GDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG--GVAEQ-FNCERD-----VDICVGTLSKAA-GCQG---GF 330 (334)
Q Consensus 266 G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~--g~~~~-~~~~~~-----~Div~~SlsKa~-G~~G---G~ 330 (334)
|.+.+ +++|+++|++|++++|+||+|...++..... .+... .++.++ .-|+++||||++ |+.| ||
T Consensus 232 G~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~ 311 (481)
T PTZ00377 232 GQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGY 311 (481)
T ss_pred CcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEE
Confidence 99988 7889999999999999999998766621111 11110 011111 137889999984 6544 88
Q ss_pred Eee
Q 019931 331 IAC 333 (334)
Q Consensus 331 i~~ 333 (334)
+++
T Consensus 312 ~~~ 314 (481)
T PTZ00377 312 FEL 314 (481)
T ss_pred EEE
Confidence 874
No 276
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.66 E-value=5.9e-15 Score=141.16 Aligned_cols=169 Identities=20% Similarity=0.144 Sum_probs=119.7
Q ss_pred hHHHHHHHHHHHhHhCCC----cEEEeccHHHHHHHHHHHHhhhhhhccCCCc--cCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 149 TNYHRLLESCLADLKKKE----DCLLCPTGFAANMAVIVAVGNIASLLAGDEK--SFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e----~alv~~sG~~An~~ai~al~~~~~~~~~~~~--~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
..+.+++.+.+++++|.+ .++++++|++||..++.++..+. .+.... ...+++++|+++...|.++...+..
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~ 114 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRA--RKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY 114 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHh--hhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence 344444555566677864 57888999999999998876420 000000 0011256889999999998888776
Q ss_pred hhhcCCcEEEEeeC-----CCHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 223 AERTKMVEVFVYKH-----CDMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 223 s~~~~g~~v~~~~~-----~D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
. +.+++.++. .|+++|++++++. ..++++|++..++|++|.+.|+++|.++|+++|++|++|+||+.+
T Consensus 115 ~----g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~ 190 (345)
T cd06450 115 L----DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGF 190 (345)
T ss_pred H----hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHH
Confidence 6 677777652 4899999998752 125678888888999999999999999999999999999999987
Q ss_pred cccC-CCcccccccCCCCCccEEEecCcccccC
Q 019931 295 VCGK-NGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 295 v~G~-~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++.- ...+. ..-.+++|+++.|++|.+++
T Consensus 191 ~~~~~~~~~~---~~~~~~~d~~~~s~~K~l~~ 220 (345)
T cd06450 191 LLPFPEPRHL---DFGIERVDSISVDPHKYGLV 220 (345)
T ss_pred HhhChhhHHH---hcCccccCEEEEchhHhhCC
Confidence 6521 11111 11124688999999998854
No 277
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.66 E-value=5.1e-15 Score=141.71 Aligned_cols=179 Identities=17% Similarity=0.136 Sum_probs=127.1
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC----cEEEeccHHHHHHHHHHHHhhhhhhccCCCccC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE----DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSF 199 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e----~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~ 199 (334)
.+|.+++++.+.-. . + ...+....+++++.+++++|.+ .++++++|++++..++.++..+
T Consensus 10 ~~~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~----------- 73 (355)
T TIGR03301 10 TSATVRDAMLVDWC-H---W-DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPR----------- 73 (355)
T ss_pred CCHHHHHHhhhhcc-C---C-CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCC-----------
Confidence 36778887765211 1 1 1112467799999999999975 2446789999999999887654
Q ss_pred CCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 200 KDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 200 ~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
++++|+.+..++.. +...++.. |.+++.++. .|++++++.+++. ++.++|+..++.+++|.+.|+++
T Consensus 74 --~~~vi~~~~~~~~~~~~~~a~~~----g~~~~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~~~~ 146 (355)
T TIGR03301 74 --DGKLLVLINGAYGERLAKICEYL----GIPHTDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNPLEA 146 (355)
T ss_pred --CCeEEEECCCchhhHHHHHHHHc----CCceEEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhHHHH
Confidence 24556666666554 22223322 667776653 3789999998753 25667777788889999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccc-cCCc-cEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~~ 334 (334)
|.++|++||+++|+|++|++|... +.+. .++|++++|++|++ |+.| |+++++
T Consensus 147 i~~l~~~~~~~livD~~~s~g~~~---------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~ 201 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSSFGAIP---------IDIEELDVDALIASANKCLEGVPGFGFVIAR 201 (355)
T ss_pred HHHHHHHcCCEEEEEeccccCCcc---------cchhhcCccEEEecCCcccccCCceeEEEEC
Confidence 999999999999999999876321 1111 35789999999998 5556 777653
No 278
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.66 E-value=4.6e-15 Score=144.70 Aligned_cols=158 Identities=16% Similarity=0.208 Sum_probs=121.2
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
.+|..+..+++|+.+++++|.+++++++||++|+..++.++.- ++||.|+++.+.|.++...+...
T Consensus 26 ~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~-------------~~Gd~Viv~~~t~~~~~~~~~~~- 91 (375)
T PRK11706 26 LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDI-------------QPGDEVIMPSYTFVSTANAFVLR- 91 (375)
T ss_pred ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCC-------------CCCCEEEECCCCcHHHHHHHHHc-
Confidence 4455688899999999999999999999999998887766531 14899999999999998888777
Q ss_pred hcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 225 RTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 225 ~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
|++++.++. .|++++++++++ ++++|++. +++|...++++|.++|+++|++||+|++|+.|..-
T Consensus 92 ---G~~~v~~d~d~~~~~~d~~~le~~i~~---~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~- 161 (375)
T PRK11706 92 ---GAKIVFVDIRPDTMNIDETLIEAAITP---KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTY- 161 (375)
T ss_pred ---CCEEEEEecCCCcCCcCHHHHHHhcCC---CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECcccccccc-
Confidence 888888863 378899988864 67877754 45798999999999999999999999999987521
Q ss_pred CCcccccccCCCCCccEEEecCc--ccccC-CccEEe
Q 019931 299 NGGGVAEQFNCERDVDICVGTLS--KAAGC-QGGFIA 332 (334)
Q Consensus 299 ~G~g~~~~~~~~~~~Div~~Sls--Ka~G~-~GG~i~ 332 (334)
.|... +- -.|+.+.||+ |.+++ .||+++
T Consensus 162 ~~~~~----g~--~~~~~~~Sf~~~K~l~~g~gG~~~ 192 (375)
T PRK11706 162 KGRAL----GT--IGHIGCFSFHETKNYTAGEGGALL 192 (375)
T ss_pred CCeee----ec--CcCEEEEeCCCCccccccCCeEEE
Confidence 12211 11 1256666665 99964 455544
No 279
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.66 E-value=3.1e-15 Score=147.14 Aligned_cols=201 Identities=13% Similarity=0.086 Sum_probs=131.0
Q ss_pred eeEEEeecCccCCCCCCHHHHH----HHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhC--------CCcEE--Eec
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAK----AAARHGM-G-PRGSALICGYTNYHRLLESCLADLKK--------KEDCL--LCP 172 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~al--v~~ 172 (334)
+..+||+...+-.+..++.+.+ ++++... + ...+....|.. +|++.+++++. .++++ .++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~----~lR~aia~~~~~~~~~~~~~~~v~~~~t~ 104 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQ----SFIEAAQKLLFGEASYALAEKRIATVQAL 104 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCH----HHHHHHHHHhcCCCccccccCeEEEeecc
Confidence 4668988886544444433333 4332221 1 13344445554 45555555431 23444 366
Q ss_pred cHHHHHHHHHH---HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---C----CHHHH
Q 019931 173 TGFAANMAVIV---AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---C----DMSHL 242 (334)
Q Consensus 173 sG~~An~~ai~---al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---~----D~~~L 242 (334)
+|..|...++. ++++ +||.|++..+.+..+...++.. |++++.++. + |++.+
T Consensus 105 G~~~al~~~~~~l~~~~~--------------~Gd~Vlv~~P~y~~~~~~~~~~----G~~~~~v~l~~~~~~~~d~~~l 166 (404)
T PTZ00376 105 SGTGALRLGFEFLKRFLP--------------AGTTVYVSNPTWPNHVNIFKSA----GLNVKEYRYYDPKTKGLDFDGM 166 (404)
T ss_pred CcchHHHHHHHHHHHhcC--------------CCCEEEEcCCCchhHHHHHHHc----CCceeeccccCcccCCcCHHHH
Confidence 77777777665 3343 3889999999988888887777 888888875 2 78899
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cc-cccccCCCCCccEEE
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GG-VAEQFNCERDVDICV 317 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g-~~~~~~~~~~~Div~ 317 (334)
++++++..++++++++.+++||+|.+.+ +++|+++|++|++++|+||+|....++... .. ....+....+.-|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i 246 (404)
T PTZ00376 167 LEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVA 246 (404)
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 9988754335688889999999999877 667888999999999999999865442100 00 011111112224899
Q ss_pred ecCcccccCCc---cEE
Q 019931 318 GTLSKAAGCQG---GFI 331 (334)
Q Consensus 318 ~SlsKa~G~~G---G~i 331 (334)
+||||+||+.| ||+
T Consensus 247 ~SfSK~~~~~GlRvG~~ 263 (404)
T PTZ00376 247 QSFSKNMGLYGERIGAL 263 (404)
T ss_pred EeCCCcccccccccceE
Confidence 99999999876 886
No 280
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.66 E-value=5.2e-15 Score=145.71 Aligned_cols=199 Identities=14% Similarity=0.156 Sum_probs=125.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC------CCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM------GPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTG 174 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~------g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG 174 (334)
..+++|+.++ ..+..+|.+.+++.+.-. ...++....|. .+|++++++++ | .+++++++++
T Consensus 34 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~----~~LR~aia~~~~~~~g~~~~~~~I~it~Ga 108 (409)
T PRK07590 34 AKIIRLGIGD-VTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGY----DFLREKIAENDYQARGCDISADEIFISDGA 108 (409)
T ss_pred CceEEecCcC-CCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCC----HHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence 6789999987 456678888886655321 11222233444 44555566543 3 2456777777
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE-----------EEEeeCCCHHHHH
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE-----------VFVYKHCDMSHLK 243 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~-----------v~~~~~~D~~~Le 243 (334)
.+++..++ .++.+ ||.|++..+.+......++.. |.+ ++.++.+.-+.++
T Consensus 109 ~~al~~l~-~~~~~--------------gd~V~v~~P~Y~~~~~~~~~~----g~~~~~~~~~~~~~~~~v~~~~~~~~~ 169 (409)
T PRK07590 109 KCDTGNIL-DIFGP--------------DNTIAVTDPVYPVYVDTNVMA----GRTGEANEDGRYSGIVYLPCTAENNFV 169 (409)
T ss_pred HHHHHHHH-HhcCC--------------CCEEEEeCCCCcchHHHHHHc----CCcccccccccccceeEeecccccCCc
Confidence 77776643 44443 788888888887777776666 554 6666642111111
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEec
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVGT 319 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~S 319 (334)
..+.+ +++++|++.+++||+|.+.+ +++|+++|++|+++||+||+|...++...- ..+.. +.-..+..|+++|
T Consensus 170 ~d~~~--~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~~~~vi~~~S 246 (409)
T PRK07590 170 PELPE--EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYE-IEGARECAIEFRS 246 (409)
T ss_pred ccCcc--cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhh-CCCcccceEEEec
Confidence 11111 36788888899999999988 567888899999999999999864432210 11111 1111223478999
Q ss_pred CcccccCCc---cEEeeC
Q 019931 320 LSKAAGCQG---GFIACR 334 (334)
Q Consensus 320 lsKa~G~~G---G~i~~~ 334 (334)
|||+||..| ||++++
T Consensus 247 fSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 247 FSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CccccCCcCceeEEEEcC
Confidence 999999877 898764
No 281
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.65 E-value=1.9e-15 Score=147.98 Aligned_cols=158 Identities=19% Similarity=0.199 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
....+.|+.+|+++|++++++..+| +.+|.+++.+++++ ||.|++++.+|.|++.++.++ +
T Consensus 66 G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~--------------gd~VLv~RN~HkSv~~alil~----g 127 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRP--------------GDKVLVDRNCHKSVYNALILS----G 127 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTT--------------TCEEEEETT--HHHHHHHHHH----T
T ss_pred cHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCC--------------CCEEEEcCCcHHHHHHHHHHc----C
Confidence 4558999999999999999877655 67999999999875 899999999999999999999 8
Q ss_pred cEEEEeeCC----------CH-----HHHHHHHhcCCCCcE---EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 229 VEVFVYKHC----------DM-----SHLKTLLSCCTMRKK---VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 229 ~~v~~~~~~----------D~-----~~Le~~l~~~~~~~~---lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
+.+++++.. ++ +.++++|++.+..+. +|++.+.| +|.+.|+++|.++|++++..|+||||
T Consensus 128 a~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 128 AIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYDIKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp EEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-HHHHHHHHCCTECEEEEE-T
T ss_pred CeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEECHHHHHHHhcccCCEEEEEcc
Confidence 887765431 44 889999988654334 56666655 89999999999999999999999999
Q ss_pred cccccccCCCcccccccCCCCCcc-------EEEecCcccccC--CccEE
Q 019931 291 HGTFVCGKNGGGVAEQFNCERDVD-------ICVGTLSKAAGC--QGGFI 331 (334)
Q Consensus 291 h~~Gv~G~~G~g~~~~~~~~~~~D-------iv~~SlsKa~G~--~GG~i 331 (334)
|+.- ++-. .+.. ..+.-++| +++.|++|++++ +++++
T Consensus 206 hGah-~~F~--~lp~-~a~~~gad~~~~~~~~vvqS~HKtL~altQts~l 251 (417)
T PF01276_consen 206 HGAH-FGFH--PLPR-SALALGADRPNDPGIIVVQSTHKTLPALTQTSML 251 (417)
T ss_dssp T-TT-GGCS--GGGT-TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEE
T ss_pred cccc-ccCC--CCcc-chhhccCccccccceeeeechhhcccccccceEE
Confidence 9853 3322 1111 11224567 999999999987 45554
No 282
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.65 E-value=8.7e-15 Score=145.07 Aligned_cols=204 Identities=19% Similarity=0.164 Sum_probs=135.6
Q ss_pred ceeEEEeecCc-cCCCCCCH---HHHHHHH-HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGND-YLGLSSHP---TIAKAAA-RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~-yLgl~~~p---~v~~a~~-~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
|...+++.+.+ |++|-++. .+.++.. ....|...+ +.++-..+||+++++++|.++++++++|++|+..++
T Consensus 10 g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y----~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~ 85 (431)
T cd00617 10 GYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAY----AGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILF 85 (431)
T ss_pred CCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCcc----CCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHH
Confidence 46677777775 56777653 3332211 112333222 223334789999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---------------CCHHHHHHHHh
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---------------CDMSHLKTLLS 247 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---------------~D~~~Le~~l~ 247 (334)
.+++++ ||+|+. .+...+....+.+. |++++.++. .|+++|+++++
T Consensus 86 ~al~~p--------------GD~V~~-~~~f~~~~~~i~~~----Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~ 146 (431)
T cd00617 86 SILLKP--------------GRTVPS-NMHFDTTRGHIEAN----GAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLID 146 (431)
T ss_pred HHhCCC--------------CCEEcc-CCcccchHHHHHhC----CCEeEEEecccccccccccCCCCCcCHHHHHHHhC
Confidence 988765 787753 33333444555555 666665432 37899999997
Q ss_pred cC-CCCcEEEEEcCCCCCC-CCccC---HHHHHHHHHHcCCEEEEecCcccc-cc-------cCCCcccccc-cCCCCCc
Q 019931 248 CC-TMRKKVVVTDSLFSMD-GDFAP---MVELVKLRRKYGFLLVLDDAHGTF-VC-------GKNGGGVAEQ-FNCERDV 313 (334)
Q Consensus 248 ~~-~~~~~lVv~e~v~n~~-G~~~p---L~~L~ela~k~ga~LivDeAh~~G-v~-------G~~G~g~~~~-~~~~~~~ 313 (334)
+. ..++++|+++.++|+. |.+.+ +++|.++|++||++||.|+||..+ .+ |..+..+.+. ..+....
T Consensus 147 ~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~s 226 (431)
T cd00617 147 EVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYA 226 (431)
T ss_pred cccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccC
Confidence 53 2347889999999986 88876 567899999999999999998753 11 1112222110 0011234
Q ss_pred cEEEecCcccccC-CccEEeeC
Q 019931 314 DICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 314 Div~~SlsKa~G~-~GG~i~~~ 334 (334)
|....|+.|.++. .||+|+++
T Consensus 227 d~~~mS~~K~~~~~~GG~i~~~ 248 (431)
T cd00617 227 DGCTMSAKKDGLVNIGGFLALR 248 (431)
T ss_pred CEEEEEeecCCCCccceEEEeC
Confidence 6778888887754 69999874
No 283
>PLN02368 alanine transaminase
Probab=99.65 E-value=7.7e-15 Score=144.75 Aligned_cols=174 Identities=13% Similarity=0.106 Sum_probs=121.8
Q ss_pred ccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHHHHh-hhhhhccCCCccCCCCCeEEEEcCCCchh
Q 019931 141 GSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIVAVG-NIASLLAGDEKSFKDEKIAIFSDALNHAS 215 (334)
Q Consensus 141 ~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~al~-~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s 215 (334)
.+....|...+.+.+.+.+.+..| .+++++++++.+++..++.+++ .+ ||.|++..+.+..
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~p--------------Gd~Vli~~P~Y~~ 167 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGE--------------KDGVLVPVPQYPL 167 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCC--------------CCEEEEeCCCCcc
Confidence 344444554555555555544435 2467777888889999998876 44 7888888888888
Q ss_pred hHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcC
Q 019931 216 IIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYG 282 (334)
Q Consensus 216 ~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~g 282 (334)
+...+.+. |.+++.++. .|++.|++.+++.+ .++++|++.+++||+|.+.+ +++|+++|++||
T Consensus 168 y~~~~~~~----g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~ 243 (407)
T PLN02368 168 YSATISLL----GGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQER 243 (407)
T ss_pred HHHHHHHc----CCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcC
Confidence 88777776 778877753 37899999886421 25788888899999999988 667888999999
Q ss_pred CEEEEecCcccccccCCCc--cccccc-CC----C-CCccEEEecCcccc-cCCc---cEEe
Q 019931 283 FLLVLDDAHGTFVCGKNGG--GVAEQF-NC----E-RDVDICVGTLSKAA-GCQG---GFIA 332 (334)
Q Consensus 283 a~LivDeAh~~Gv~G~~G~--g~~~~~-~~----~-~~~Div~~SlsKa~-G~~G---G~i~ 332 (334)
+++|+||+|...+++.... .+.... .+ . ...-|++.||||+| |+.| ||++
T Consensus 244 ~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i 305 (407)
T PLN02368 244 LVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFE 305 (407)
T ss_pred CEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEE
Confidence 9999999999876643111 111110 11 1 11248899999998 6766 8886
No 284
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.65 E-value=1.5e-14 Score=140.89 Aligned_cols=186 Identities=17% Similarity=0.148 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHhcC---CCCccccccCchHHHHHHHHHHHh---HhCC---CcEEEeccHHHHHHHHHHHHhhhhhhccC
Q 019931 124 SHPTIAKAAARHGM---GPRGSALICGYTNYHRLLESCLAD---LKKK---EDCLLCPTGFAANMAVIVAVGNIASLLAG 194 (334)
Q Consensus 124 ~~p~v~~a~~~~g~---g~~~sr~~~G~~~~~~~LE~~La~---~~g~---e~alv~~sG~~An~~ai~al~~~~~~~~~ 194 (334)
.++.|++++.+|-. +...+...++. .....+++.+++ +++. +.+++++++++++..++.++.... +..
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~-~~~- 87 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDE-ILK- 87 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhh-ccc-
Confidence 46788887765432 22222222221 223344444444 4443 456677888889998888763200 000
Q ss_pred CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc
Q 019931 195 DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA 269 (334)
Q Consensus 195 ~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~ 269 (334)
.+++.|++....|.+....+.... ..|.+++.++.+ |+++|++++++ ++++|++.+++|++|.+.
T Consensus 88 ------~~~~~vi~~~~e~ps~~~~~~~~~-~~G~~v~~v~~~~~g~~d~~~l~~~i~~---~t~lv~~~~~~n~tG~~~ 157 (382)
T TIGR03403 88 ------GGKNHIITTEVEHPAVRATCAFLE-SLGVEVTYLPINEQGTITAEQVREAITE---KTALVSVMWANNETGMIF 157 (382)
T ss_pred ------CCCCEEEEcCCccHHHHHHHHHHH-HCCCEEEEEecCCCCCCCHHHHHHhccc---CCeEEEEEcccCCCcccc
Confidence 125678888888988776655432 237888877653 78888888864 689999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEE
Q 019931 270 PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 270 pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i 331 (334)
|+++|.++|+++|+++++|++|+.|.+- ..+ ..++|+++.|++|.+|+.| |++
T Consensus 158 ~~~~I~~la~~~g~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l 212 (382)
T TIGR03403 158 PIKEIGEICKERGVLFHTDAVQAIGKIP---------VDVQKAGVDFLSFSAHKFHGPKGVGGL 212 (382)
T ss_pred CHHHHHHHHHHcCCEEEEechhhcCCCc---------cCccccCCCEEEEcchhhCCCCceEEE
Confidence 9999999999999999999999865321 122 2457999999999888765 544
No 285
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.64 E-value=8.1e-15 Score=143.70 Aligned_cols=206 Identities=17% Similarity=0.118 Sum_probs=135.6
Q ss_pred eEEEeecCcc--CCCCC--CHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhC----CCcE--EEeccHHHH
Q 019931 110 RLLLFSGNDY--LGLSS--HPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKK----KEDC--LLCPTGFAA 177 (334)
Q Consensus 110 ~~l~f~sn~y--Lgl~~--~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g----~e~a--lv~~sG~~A 177 (334)
..+||+.+.+ -+... .+.+++++.+... + ...+....|..++.+.+.+.+.+..+ .++. ++++++.+|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 4688888743 12222 3677777766532 2 12344455654444444444433222 2344 667777889
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~ 250 (334)
+..++.++... ++||.|++..+.+......++.. |++++.++. .|++.|++.+++..
T Consensus 107 l~~~~~~l~~~------------~pGd~Vlv~~P~y~~~~~~~~~~----g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~ 170 (396)
T PRK09257 107 LRVGADFLKRA------------FPDAKVWVSDPTWPNHRAIFEAA----GLEVKTYPYYDAATKGLDFDAMLADLSQAP 170 (396)
T ss_pred HHHHHHHHHHh------------CCCCeEEECCCCcccHHHHHHHc----CCcEEEEeccccccCccCHHHHHHHHHhCC
Confidence 88888766421 13889999999888888777776 888887763 27889998887543
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC--CcccccccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN--GGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~--G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
.+++++++.+++||+|.+.+ +++|+++|++|++++|.||+|....++.. -..+....+..++ -|+++||||+|+
T Consensus 171 ~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~ 249 (396)
T PRK09257 171 AGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLE-LLVASSFSKNFG 249 (396)
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCc-EEEEEEcCCcCc
Confidence 35678888999999999887 67789999999999999999986433200 0011111111123 488999999999
Q ss_pred CCc---cEEe
Q 019931 326 CQG---GFIA 332 (334)
Q Consensus 326 ~~G---G~i~ 332 (334)
+.| ||++
T Consensus 250 ~~GlRiG~~~ 259 (396)
T PRK09257 250 LYGERVGALS 259 (396)
T ss_pred cccccceeEE
Confidence 866 8875
No 286
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=6.7e-15 Score=143.79 Aligned_cols=155 Identities=15% Similarity=0.200 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
.+...+||+++++++|.+++++++||++|+..++.++ ..+ ||.|++..+.|.+....+...
T Consensus 32 g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~--------------Gd~Viv~~~~~~~~~~~~~~~---- 93 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGP--------------GDEVITPSLTWVSTLNMIVLL---- 93 (379)
T ss_pred CHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCC--------------CCEEEECCCcHHHHHHHHHHc----
Confidence 4667999999999999999999999999999999887 443 788999888988887776665
Q ss_pred CcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCc
Q 019931 228 MVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGG 301 (334)
Q Consensus 228 g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~ 301 (334)
|++++.++. .|++++++++.+ ++++|+.. ++.|.+.|+++|.++|+++|+++|+|++|++|..- .|.
T Consensus 94 G~~~v~vd~~~~~~~~d~~~l~~~i~~---~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~-~~~ 166 (379)
T PRK11658 94 GATPVMVDVDRDTLMVTPEAIEAAITP---RTKAIIPV---HYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYY-KGR 166 (379)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhccc---CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeE-CCe
Confidence 888888763 278899988864 67888733 45788999999999999999999999999987532 121
Q ss_pred ccccccCCCCCccEEEecCccccc-CCccEEee
Q 019931 302 GVAEQFNCERDVDICVGTLSKAAG-CQGGFIAC 333 (334)
Q Consensus 302 g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i~~ 333 (334)
.+ +- .++++...+-+|.+. +.||++++
T Consensus 167 ~~----g~-~g~~~~Sf~~~K~l~~g~GG~v~~ 194 (379)
T PRK11658 167 HI----GA-RGTAIFSFHAIKNITCAEGGLVVT 194 (379)
T ss_pred ec----CC-CCCEEEeCCCCCcCcccCceEEEE
Confidence 11 11 122444333457663 46888875
No 287
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.64 E-value=5.4e-15 Score=155.96 Aligned_cols=214 Identities=12% Similarity=0.003 Sum_probs=140.0
Q ss_pred hcccce----eEEEeecC-ccCCCC--CCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEec
Q 019931 104 FARQFK----RLLLFSGN-DYLGLS--SHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCP 172 (334)
Q Consensus 104 ~~~~g~----~~l~f~sn-~yLgl~--~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~ 172 (334)
.+.+|+ +|+|+++. .+.++. .||+|.+|+.+ .+....... ..-.++...+|.++|++..+ .+++++++
T Consensus 356 ~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~-~~~~hepa~~LAe~L~~~~~~~~l~rVffs~ 434 (817)
T PLN02974 356 PKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF-PENVHEPALRAAELLLGGPGKGWASRVFFSD 434 (817)
T ss_pred ECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc-CccCCHHHHHHHHHHHhccCCCCCCEEEECC
Confidence 345666 99998774 345554 59999997754 332221111 11135677889999999765 35788889
Q ss_pred cHHHHHHHHHHHHhhhhhhccCCCccC---------CCCCeEEEEcCCCchhhHHHHHHhhhc-C--C--cE-----EEE
Q 019931 173 TGFAANMAVIVAVGNIASLLAGDEKSF---------KDEKIAIFSDALNHASIIDGIRIAERT-K--M--VE-----VFV 233 (334)
Q Consensus 173 sG~~An~~ai~al~~~~~~~~~~~~~~---------~~~gd~Vl~d~~~H~s~~~g~~ls~~~-~--g--~~-----v~~ 233 (334)
||++|+..+|+...+.-... .+.... .++..+|-....+|+.+..++.++... . . .. ...
T Consensus 435 sGSeAvE~AlKmA~r~y~~~-~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~ 513 (817)
T PLN02974 435 NGSTAIEVALKMAFRKFIVD-HGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLF 513 (817)
T ss_pred chHHHHHHHHHHHHHHHHHh-cCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcc
Confidence 99999999999654320000 010000 023457778899999888777665210 0 0 00 000
Q ss_pred e----------------eCC--C-----------------------------HHHHHHHHhc-----CCCCcEEEEEcCC
Q 019931 234 Y----------------KHC--D-----------------------------MSHLKTLLSC-----CTMRKKVVVTDSL 261 (334)
Q Consensus 234 ~----------------~~~--D-----------------------------~~~Le~~l~~-----~~~~~~lVv~e~v 261 (334)
+ +.. + .+.+++.|++ ...+...|++|++
T Consensus 514 ~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPv 593 (817)
T PLN02974 514 LDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPV 593 (817)
T ss_pred cCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEecc
Confidence 0 000 0 1456777753 1236789999996
Q ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCccccc
Q 019931 262 -FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 262 -~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G 325 (334)
.+..|.+.| +++|+++|++||++||+||+++. +|++|..+ ++++++.|| |+ +++|+++
T Consensus 594 iqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TG--fGRtG~~fa~e~~gv~PD--Ii--~~gKgLt 657 (817)
T PLN02974 594 LHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTG--LWRLGVESAWELLGCKPD--IA--CYAKLLT 657 (817)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccC--CCcccchhhHHhcCCCCC--EE--eeccccc
Confidence 677787655 89999999999999999999994 89999887 478898884 55 8999996
No 288
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.64 E-value=2.5e-14 Score=135.94 Aligned_cols=195 Identities=15% Similarity=0.161 Sum_probs=140.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEe-ccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLC-PTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~-~sG~~An~~ai~ 183 (334)
.++|-+.--| +.+..+|.|++|++++- .|--|+. .+...+.+.+.....+.++. +..++| ++-.-++..+|+
T Consensus 25 ~DvlPmWVAD-MDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~ 101 (388)
T COG1168 25 EDVLPMWVAD-MDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIR 101 (388)
T ss_pred CCcceeeeec-ccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHH
Confidence 4566666666 78999999999998764 3434444 23344555555555555442 334555 666778888999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCCCcEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~l 255 (334)
++.++ ||-|+...+.+......+... +.+++..+. .|+++||+.+.+ .+.++
T Consensus 102 ~~T~~--------------gd~Vvi~tPvY~PF~~~i~~n----~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl 161 (388)
T COG1168 102 ALTKP--------------GDGVVIQTPVYPPFYNAIKLN----GRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKL 161 (388)
T ss_pred HhCcC--------------CCeeEecCCCchHHHHHHhhc----CcEEEeccccccCCcEEecHHHHHHHHhc--CCccE
Confidence 88765 788888888888888888877 666665542 399999999986 35689
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---CCccEEEecCcccccCCc
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---RDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---~~~Div~~SlsKa~G~~G 328 (334)
++.++|+||+|.+-. |.+|.+||++||+++|.||+|+-.+++.+ +.+. ...+. .+..|.+.|-||+|+..|
T Consensus 162 ~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h~~-~a~ls~~~a~~~it~~saSKtFNlaG 238 (388)
T COG1168 162 FILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH-KHIP-FASLSERFADNSITLTSASKTFNLAG 238 (388)
T ss_pred EEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC-Cccc-hhhcChhhhcceEEEeeccccccchh
Confidence 999999999998754 88999999999999999999999887532 2111 11222 233477888899998765
No 289
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.64 E-value=2e-14 Score=139.49 Aligned_cols=186 Identities=22% Similarity=0.194 Sum_probs=134.2
Q ss_pred CCHHHHHHHHHh-----cCC-CCccccccCchHHHHHHHHHHHhHhCCCc---EEEeccHHHHHHHHHHHHhhhhhhccC
Q 019931 124 SHPTIAKAAARH-----GMG-PRGSALICGYTNYHRLLESCLADLKKKED---CLLCPTGFAANMAVIVAVGNIASLLAG 194 (334)
Q Consensus 124 ~~p~v~~a~~~~-----g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~e~---alv~~sG~~An~~ai~al~~~~~~~~~ 194 (334)
.++.|.+++.++ +.+ ++.+....-.....+++++.+++++|++. ++++++++.++..++.++..+ +
T Consensus 11 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~---~-- 85 (371)
T PF00266_consen 11 MPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNP---L-- 85 (371)
T ss_dssp -BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHH---G--
T ss_pred CCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccc---c--
Confidence 467788876554 222 11121121124677899999999999765 566688888999999888321 0
Q ss_pred CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc
Q 019931 195 DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA 269 (334)
Q Consensus 195 ~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~ 269 (334)
.+++.|++....|.+....+.......+.++..++. .|++++++.|.+ ++++|++..+.+.+|...
T Consensus 86 ------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~---~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 86 ------KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP---DTRLVSISHVENSTGVRN 156 (371)
T ss_dssp ------TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT---TESEEEEESBETTTTBBS
T ss_pred ------ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc---ccceEEeecccccccEEe
Confidence 137888888889998775555443334788777653 388999999974 899999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 270 PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 270 pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
|+++|.++|+++|+++++|.+|+.|... ..+. .++|++++|..|-+|+.| |++.
T Consensus 157 pi~~I~~~~~~~~~~~~vD~~~~~g~~~---------id~~~~~~D~~~~s~~Kl~gp~G~g~l~ 212 (371)
T PF00266_consen 157 PIEEIAKLAHEYGALLVVDAAQSAGCVP---------IDLDELGADFLVFSSHKLGGPPGLGFLY 212 (371)
T ss_dssp SHHHHHHHHHHTTSEEEEE-TTTTTTSS-----------TTTTTESEEEEESTSTTSSSTEEEEE
T ss_pred eeceehhhhhccCCceeEechhcccccc---------ccccccccceeeecccccCCCCchhhhe
Confidence 9999999999999999999999987541 2222 468999999999335566 5544
No 290
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.64 E-value=1.4e-14 Score=140.31 Aligned_cols=198 Identities=15% Similarity=0.054 Sum_probs=133.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
.+.++|+.|.. .+..+|.+++++.+.-.....+ +... ..+|++.||++++. +.+++++++.+++..++.++.
T Consensus 22 ~~~i~l~~~~n-~~~~~~~~~~a~~~~~~~~~~Y----~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~ 95 (360)
T PRK07392 22 DAILDFSASIN-PLGPPESVIAAIQSALSALRHY----PDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELA 95 (360)
T ss_pred ccEEEeCCcCC-CCCCCHHHHHHHHHHHHHhhcC----CCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC
Confidence 46789998742 3556788888776532221111 1112 35789999999874 457777888888888887654
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEEEEEc
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lVv~e 259 (334)
+ +|.|++..+.+..+...++.. |.+++.++.. +..+++++.+.. .+++++++.
T Consensus 96 -~--------------g~~vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 155 (360)
T PRK07392 96 -Q--------------LRAVYLITPAFGDYRRALRAF----GATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLN 155 (360)
T ss_pred -C--------------CCeEEEECCCcHHHHHHHHHc----CCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEe
Confidence 2 456777778777777777666 7888877643 123455554432 267888888
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+++||+|.+.+.++|.++++++++ +|+||+|...++..............+. -|+++||||+||..| ||++++
T Consensus 156 nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~-vi~i~S~SK~~~l~GlRiG~~v~~ 231 (360)
T PRK07392 156 NPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPN-LIILRSLTKFYSLPGLRLGYAIAH 231 (360)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCC-EEEEEechhhhcCCchheeeeeCC
Confidence 999999999999999999999985 6779999864432211111111111122 488999999999777 888764
No 291
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=5.8e-16 Score=145.64 Aligned_cols=220 Identities=20% Similarity=0.179 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCCCCCc
Q 019931 9 KWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSSGDEN 88 (334)
Q Consensus 9 ~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 88 (334)
...|+++.++.+++--||.+-|++++++
T Consensus 22 ~~~DPev~~ii~~Ek~RQ~~gieLIaSE---------------------------------------------------- 49 (477)
T KOG2467|consen 22 EEVDPEVHDIIEKEKERQKRGIELIASE---------------------------------------------------- 49 (477)
T ss_pred hhcChHHHHHHHHHHHhhhcceeEeecc----------------------------------------------------
Confidence 3568899999999999999999999887
Q ss_pred ceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHH----hHhC
Q 019931 89 EIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLA----DLKK 164 (334)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La----~~~g 164 (334)
||+|...+..-.+. ..++|..|..|.|++.|+ ++.+++|.... +.|+
T Consensus 50 ------------------------NFts~aVmeAlGS~----ltNKYSEGyPG~RYYGGn-e~ID~iE~LCq~RALeaF~ 100 (477)
T KOG2467|consen 50 ------------------------NFTSRAVMEALGSC----LTNKYSEGYPGARYYGGN-EYIDQIELLCQKRALEAFG 100 (477)
T ss_pred ------------------------cchHHHHHHHHhHH----hhcccccCCCcccccCcc-hHHHHHHHHHHHHHHHHhC
Confidence 67665432222222 457899999999999887 55577665433 3456
Q ss_pred CCc----EEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCch-hhHHHHHHhhhcCCcEEE-----E
Q 019931 165 KED----CLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA-SIIDGIRIAERTKMVEVF-----V 233 (334)
Q Consensus 165 ~e~----alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~-s~~~g~~ls~~~~g~~v~-----~ 233 (334)
.+. +.+. -||+-||+++..+++.| ++-|+--.+-|+ -+.+|.....++-.+.-+ +
T Consensus 101 ldp~kWGVNVQp~SGSPANfavYtall~P--------------h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmP 166 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSGSPANFAVYTALLKP--------------HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMP 166 (477)
T ss_pred CCHHHCceeeccCCCCchhhHHHhhhcCC--------------CCeeeeccCCCCCccccccccCCceeeeeeeecccCc
Confidence 542 4555 69999999999999986 566663332222 233443322111011111 2
Q ss_pred eeC------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 234 YKH------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 234 ~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
|.. .|++.||+.....+ ++.+|...+.|+. ..|.++++++|++.|++|++|.||..|++. .|+. .
T Consensus 167 Ykv~~~TG~IDYD~Le~~A~~fr-Pk~iiaG~SaY~R---~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA---A~vi--p 237 (477)
T KOG2467|consen 167 YKVDPSTGYIDYDKLEKTATLFR-PKLIIAGTSAYSR---LIDYARFRKIADKVGAYLMADMAHISGLVA---AGVI--P 237 (477)
T ss_pred eeeCCCCCceehHHHHHHHHhcC-CcEEEeccccchh---hccHHHHHHHHHhcCceeehhhhhHHHHHh---cccC--C
Confidence 222 29999999877653 3345566677766 678899999999999999999999998763 3332 2
Q ss_pred CCCCCccEEEecCcccc-cCCccEEe
Q 019931 308 NCERDVDICVGTLSKAA-GCQGGFIA 332 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~-G~~GG~i~ 332 (334)
++...+|||+.|.+|++ |+.||+|+
T Consensus 238 sPFey~DiVTTTTHKsLRGPRg~mIF 263 (477)
T KOG2467|consen 238 SPFEYCDIVTTTTHKSLRGPRGAMIF 263 (477)
T ss_pred CcccccceeeccccccccCCcceeEE
Confidence 33457899999999999 88999986
No 292
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.63 E-value=6.6e-15 Score=148.83 Aligned_cols=204 Identities=15% Similarity=0.092 Sum_probs=138.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHh-Hh-C---C---CcEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLAD-LK-K---K---EDCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~-~~-g---~---e~alv~~sG~~An~~ 180 (334)
++++|++-++ .++..++.|.++++.. .|. .+....|..++.+++.+.+.+ .. + . +++++++++++|+..
T Consensus 100 ~~~i~l~~g~-p~~~~~~~v~e~~~~~-~~~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~ 176 (527)
T PRK09275 100 RDAVSYVRDQ-LGFDADEFVYELVDGI-IGD-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCY 176 (527)
T ss_pred HHHHhhcCCC-CCCCCCHHHHHHHHHH-hcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 5677887775 7998888888866544 332 355566666666666653332 21 2 1 257788888999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~ 253 (334)
++.+++... ++ ++||.|++..+.+..+...+.+.. .+.+++.++. .|.++|++++. +++
T Consensus 177 ~~~aL~~~~-ll--------~pGD~Vlv~~P~y~~Y~~~~~l~g--~~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~t 242 (527)
T PRK09275 177 IFDSLKENG-LL--------KAGDKIALMTPIFTPYLEIPELPR--YDLEVVHINADEENEWQYPDSELEKLRD---PSI 242 (527)
T ss_pred HHHHHhhhh-cC--------CCCCEEEEeCCChHHHHHHHHHcC--CCeEEEEeecCcccCCCCCHHHHHhhcC---CCC
Confidence 888742100 00 138888888888877777666651 1345555542 26788888765 378
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
++|++.+|+||+|.+.+ +++|+++|++ ++++||+||+|...+. ....+. ...++..|++.||||+||+.|
T Consensus 243 kai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~s~~---~~~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 243 KALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DFRSLF---AVLPYNTILVYSFSKYFGATG 317 (527)
T ss_pred CEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cccCHH---HhCCCCEEEEeehhhhccCcH
Confidence 99998899999999988 7778888964 5999999999986432 111111 122444699999999999988
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
||++++
T Consensus 318 ~RlG~i~~~ 326 (527)
T PRK09275 318 WRLGVIALH 326 (527)
T ss_pred hHHhhhhcC
Confidence 888764
No 293
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.6e-14 Score=138.85 Aligned_cols=190 Identities=15% Similarity=0.090 Sum_probs=128.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~a 184 (334)
..+++|..|. ..+..+|.+++++.+.-. ....+. ..| ..+|+++++++++. +++++++++++++..++.+
T Consensus 18 ~~~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g----~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~ 91 (337)
T PRK03967 18 NYRIWLDKNE-NPFDLPEELKEEIFEELKRVPFNRYP-HIT----SDPLREAIAEFYGLDAENIAVGNGSDELISYLVKL 91 (337)
T ss_pred CceEEecCCC-CCCCCCHHHHHHHHHHhhcCccccCC-CCC----HHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHH
Confidence 5678998886 245667888887765432 122222 112 36788999999984 4566667777777666554
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEc
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e 259 (334)
+ + +|.|++..+.|.......+.. |.+++.++. .|++.+++.+. ++++|++.
T Consensus 92 ~--~--------------gd~V~v~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~~~----~~~~v~~~ 147 (337)
T PRK03967 92 F--E--------------GKHIVITPPTFGMYSFYAKLN----GIPVIDVPLKEDFTIDGERIAEKAK----NASAVFIC 147 (337)
T ss_pred h--C--------------CCeEEEeCCChHHHHHHHHHc----CCeEEEeecCCCCCcCHHHHHHhcc----CCCEEEEe
Confidence 3 2 677887777776554444444 778777764 25677776542 56777788
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+++||+|.+.+.++|.++++ +++++|+||+|... .+. .........++ -|+++||||+||..| ||++++
T Consensus 148 ~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~-~~~---~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~ 219 (337)
T PRK03967 148 SPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEF-SGK---SLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN 219 (337)
T ss_pred CCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhh-ccc---chHHHHhhCCC-EEEEecchHhhcchhhhheeeecC
Confidence 99999999999999999995 79999999999852 221 11111111123 488999999999766 898764
No 294
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.2e-15 Score=140.25 Aligned_cols=203 Identities=20% Similarity=0.221 Sum_probs=146.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~ 188 (334)
...+||-|.- +-- ...+.++++.+...|.. ++|..+...+||++.|+++|+|+++|++||++.|+.+|+.-+..
T Consensus 21 ~~~vDLRSDT-vT~-PTdeMr~am~eA~vgDd----VyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~ 94 (384)
T KOG1368|consen 21 HRSVDLRSDT-VTV-PTDEMRRAMAEASVGDD----VYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQ 94 (384)
T ss_pred eecccccccc-ccC-ChHHHHHHHhhcccCcc----cccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcC
Confidence 3445555543 222 23456777777777754 78888989999999999999999999999999999999998874
Q ss_pred hhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCC-----CCcEEEEE
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCT-----MRKKVVVT 258 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~-----~~~~lVv~ 258 (334)
++..|+++..+|.-.+..--++... ++.+..+.. .|++++|+.++..+ +.|++|.+
T Consensus 95 -------------rg~eii~gd~~HI~~~E~gg~s~l~-gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368|consen 95 -------------RGSEIIVGDRAHIHRYEQGGISQLA-GVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred -------------CCceEEeccchheeehhccChhhhc-cceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEe
Confidence 4788999999987655433333211 565655542 27999999998432 47899999
Q ss_pred cCCCCCCC-CccCHH---HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEee
Q 019931 259 DSLFSMDG-DFAPMV---ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIAC 333 (334)
Q Consensus 259 e~v~n~~G-~~~pL~---~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~ 333 (334)
|..++..| .+.||+ ++.++|+++|+.|..|.|..+..--..|-++-+. -..+|-+-.+|||++|. .|.+|+|
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i---~~~fDSVsiCLSKglgAPVGSViVG 237 (384)
T KOG1368|consen 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKI---CSAFDSVSICLSKGLGAPVGSVIVG 237 (384)
T ss_pred eccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHH---HHhhhhhhhhhhccCCCCcccEEEc
Confidence 99998766 888865 5788999999999999987754321112222111 13346666789999986 7888887
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
|
T Consensus 238 ~ 238 (384)
T KOG1368|consen 238 S 238 (384)
T ss_pred c
Confidence 5
No 295
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=1.5e-14 Score=139.60 Aligned_cols=194 Identities=12% Similarity=0.059 Sum_probs=137.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CC-CccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GP-RGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~-~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~ 183 (334)
+.+++|+.|+. .+..+|.+++++.+.-. +. ..+.. . ...+|++.++++++.+ .+++++++.+++..++.
T Consensus 26 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~-~----~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 26 TGMVKLDAMEN-PYRLPAELRAELGERLAEVALNRYPD-P----RAAALKAALRAAMGVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCceeCcCCCC-CCCCCHHHHHHHHHHhhccccccCCC-C----CHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHH
Confidence 57889988763 67778999998876432 11 11211 1 2377999999999853 35555555677777777
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~ 258 (334)
+++.+ ||.|++..+.+......++.. |++++.++.+ |+++|+++++. .++++|++
T Consensus 100 ~~~~~--------------gd~vlv~~P~y~~~~~~~~~~----g~~~~~i~~~~~~~~d~~~l~~~~~~--~~~~~v~l 159 (356)
T PRK04870 100 ACAKP--------------GATVLAPEPGFVMYRMSAKLA----GLEFVGVPLTADFTLDLPAMLAAIAE--HRPALVFL 159 (356)
T ss_pred HhcCC--------------CCEEEECCCCHHHHHHHHHHc----CCEEEEecCCCCCCCCHHHHHHHhhc--CCCCEEEE
Confidence 77654 788888888887776666655 8888887643 78889888864 26788888
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
.+++||+|.+.+.+++.++++..++++|+||+|.. +... .......-.+ ..|++.|||| +|+.| ||++++
T Consensus 160 ~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~--~~~~--~~~~~~~~~~-~vi~~~S~SK-~~~~GlRiG~~i~~ 232 (356)
T PRK04870 160 AYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQP--FAGD--SWLPRLARFP-NLLVMRTVSK-LGLAGLRLGYLAGH 232 (356)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchh--hcCc--chHHHHhhCC-CEEEEecchh-hhhHHHhhhhhhCC
Confidence 89999999999998888888877899999999974 2211 1111111112 2489999999 88766 887653
No 296
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.63 E-value=1.3e-14 Score=142.87 Aligned_cols=181 Identities=19% Similarity=0.142 Sum_probs=130.9
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--c-EEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--D-CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~-alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
-+++|++++.++-.+.. + .+.....+++++.+++++|.+ . +++.++|+.++..++..+.++
T Consensus 20 ~~~~V~~a~~~~~~~~~-~---~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~------------ 83 (401)
T PLN02409 20 IPERVLRAMNRPNEDHR-S---PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSP------------ 83 (401)
T ss_pred CCHHHHHHhcCCCCCCC-C---HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCC------------
Confidence 47888888766443321 1 123467789999999999864 2 466688899998888776654
Q ss_pred CCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHH
Q 019931 201 DEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVEL 274 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L 274 (334)
||.|++..+.|.+..- ..... ..|.+++.++.+ |++++++++++.+ +++++|++.++.|++|.+.|+++|
T Consensus 84 --Gd~Vlv~~~~~~~~~~-~~~~~-~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i 159 (401)
T PLN02409 84 --GDKVVSFRIGQFSLLW-IDQMQ-RLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGV 159 (401)
T ss_pred --CCEEEEeCCCchhHHH-HHHHH-HcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHH
Confidence 6777777777766431 12222 126777777642 7899999987531 268899999999999999999999
Q ss_pred HHH--HHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccC-Cc-cEEee
Q 019931 275 VKL--RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 275 ~el--a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
.++ |+++|+++++|++|+.|.+ ...+. .++|+++.|.+|.|++ .| |++..
T Consensus 160 ~~l~~~~~~g~~~vvD~v~s~g~~---------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~ 214 (401)
T PLN02409 160 RKLLDCAQHPALLLVDGVSSIGAL---------DFRMDEWGVDVALTGSQKALSLPTGLGIVCA 214 (401)
T ss_pred HHHHhhhccCcEEEEEcccccCCc---------cccccccCccEEEEcCccccCcCCCcceeEE
Confidence 999 9999999999999986532 12222 3679999999999954 55 67654
No 297
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.62 E-value=2.9e-14 Score=137.89 Aligned_cols=195 Identities=13% Similarity=0.083 Sum_probs=127.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
.+++||+.|. ..+..+|.+++++.+....... +.. +...+|+++++++++. +++++++++.+++..++.++
T Consensus 19 ~~~~~l~~~~-~~~~~p~~~~~a~~~~~~~~~~----Y~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~- 91 (354)
T PRK06358 19 NMILDFSANI-NPLGVPESLKQAITENLDKLVE----YPD-PDYLELRKRIASFEQLDLENVILGNGATELIFNIVKVT- 91 (354)
T ss_pred cceEEecCCC-CCCCCCHHHHHHHHHHHHhhhc----CCC-ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-
Confidence 4578998874 2334478888877654211111 111 2246899999999875 45777788888888888764
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC-----H-HHHHHHHhcCCCCcEEEEEcC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD-----M-SHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D-----~-~~Le~~l~~~~~~~~lVv~e~ 260 (334)
.+ +. |++..+.+......++.. |++++.++.+. + +++.+.+. .++++|++.+
T Consensus 92 ~~--------------~~-v~i~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~v~~~~ 149 (354)
T PRK06358 92 KP--------------KK-VLILAPTFAEYERALKAF----DAEIEYAELTEETNFAANEIVLEEIK---EEIDLVFLCN 149 (354)
T ss_pred CC--------------Cc-EEEecCChHHHHHHHHHc----CCeeEEEeCccccCCCccHHHHHhhc---cCCCEEEEeC
Confidence 21 33 555666666665555544 77877776421 2 23333333 2578887788
Q ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 261 LFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 261 v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++||+|.+.+ +++|.++|++|++++|+||+|...+++.............++ -|+++||||.||..| ||+++
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~gl~G~RiG~lv~ 227 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKN-LIIIRAFTKFFAIPGLRLGYGLT 227 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCC-EEEEEechhhccCcchhheeeec
Confidence 9999999887 778888999999999999999865443211111111121123 388999999999766 88875
No 298
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.62 E-value=2.3e-14 Score=138.61 Aligned_cols=194 Identities=16% Similarity=0.107 Sum_probs=130.2
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al 185 (334)
++++++|+.|.. .+..+|.+++++.+.-.....+ .. ....+|++.++++++. +++++++++.+++..++.++
T Consensus 19 ~~~~i~l~~~~~-~~~~p~~~~~a~~~~~~~~~~y----~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l 92 (356)
T PRK08056 19 PDQLLDFSANIN-PLGMPVSLKRAIIDNLDCAERY----PD-VEYRHLHQALARHHQVPASWILAGNGETESIFAVVSGL 92 (356)
T ss_pred hhhEEEeccccC-CCCCCHHHHHHHHHHHHhcccC----cC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh
Confidence 477899998853 3556888888776532211111 11 1257899999999985 45677777788887777765
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CH-HHHHHHHhcCCCCcEEEEEc
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DM-SHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~-~~Le~~l~~~~~~~~lVv~e 259 (334)
.+ +++|+.+ +.+......++.. |.+++.++.. ++ +++++.+. +++++|++.
T Consensus 93 -~~--------------g~viv~~-P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~~~~~~~---~~~k~v~l~ 149 (356)
T PRK08056 93 -KP--------------RRAMIVT-PGFAEYRRALQQV----GCEIRRYSLREADGWQLTDAILEALT---PDLDCLFLC 149 (356)
T ss_pred -CC--------------CCEEEeC-CCcHHHHHHHHHc----CCeEEEEecccccCCCccHHHHHhcc---CCCCEEEEe
Confidence 32 5666654 3444444455554 7888887642 22 23334443 478899999
Q ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 260 SLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 260 ~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+++||+|.+.+ +++|+++|+++++++|+||+|...++. +......... .+.+|++.||||+||..| ||+++
T Consensus 150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~v~ 226 (356)
T PRK08056 150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD--ETGFIPQLAD-NPHLWVLRSLTKFYAIPGLRLGYLVN 226 (356)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc--chHHHHHhcc-CCCEEEEEechhhccCcchhheeeec
Confidence 99999999988 788999999999999999999754332 2221111111 224689999999999877 88875
No 299
>PLN02397 aspartate transaminase
Probab=99.62 E-value=2.6e-14 Score=141.62 Aligned_cols=202 Identities=18% Similarity=0.105 Sum_probs=129.1
Q ss_pred eeEEEeecCccCCCCCCHHHHH----HHHHh-cCCCC-ccccccCchHHHHHHHHHHHhHhCC--------CcE----EE
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAK----AAARH-GMGPR-GSALICGYTNYHRLLESCLADLKKK--------EDC----LL 170 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~----a~~~~-g~g~~-~sr~~~G~~~~~~~LE~~La~~~g~--------e~a----lv 170 (334)
...||++..+|.....+|.+.+ +.++. ..+.. .+....|.. +|++++++++.. +.+ ++
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~----~LR~aia~~~~~~~~~~~~~~~i~~~~i~ 123 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLA----EFNKLSAKLAYGADSPAIKENRVATVQCL 123 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCH----HHHHHHHHHHcCCCCchhhcCeeEeeecc
Confidence 4568888888777666664444 43332 22221 344455554 455555554421 122 12
Q ss_pred eccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHH
Q 019931 171 CPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLK 243 (334)
Q Consensus 171 ~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le 243 (334)
.++|..++...+.+++.+ ||.|++..+.+......++.. |++++.++. .|++.++
T Consensus 124 ~g~Ga~~l~~~~~~~~~p--------------Gd~Vlv~~P~y~~y~~~~~~~----g~~~~~v~l~~~~~~~~d~~~l~ 185 (423)
T PLN02397 124 SGTGSLRLGAEFLARFYP--------------GSTIYIPNPTWGNHHNIFRDA----GVPVRTYRYYDPKTRGLDFDGLL 185 (423)
T ss_pred cchHHHHHHHHHHHHhCC--------------CCEEEEeCCCchhHHHHHHHc----CCeEEEeecccCcCCccCHHHHH
Confidence 233444444444444333 788998888888888888777 888887753 2788888
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcc--cccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG--VAEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g--~~~~~~~~~~~Div~~ 318 (334)
+.+++..+++++|+..+++||+|.+.+ +++|+++|++||+++|+||+|...+++..... ....+....+.-|+++
T Consensus 186 ~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~ 265 (423)
T PLN02397 186 EDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQ 265 (423)
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEE
Confidence 877643346789999999999999887 66788899999999999999997655321011 1111111112248899
Q ss_pred cCcccccCCc---cEEe
Q 019931 319 TLSKAAGCQG---GFIA 332 (334)
Q Consensus 319 SlsKa~G~~G---G~i~ 332 (334)
||||+|++.| ||++
T Consensus 266 SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 266 SYAKNMGLYGERVGALS 282 (423)
T ss_pred ECcccCCCccccceEEE
Confidence 9999999877 8863
No 300
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.60 E-value=4.6e-14 Score=136.61 Aligned_cols=178 Identities=16% Similarity=0.164 Sum_probs=125.0
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---c-EEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---D-CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~-alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
.|.+++++.+.- +... ..+....+++++++++++|.+ . ++++++|+.++..++.++..+
T Consensus 17 ~~~~~~a~~~~~-~~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~------------ 79 (368)
T PRK13479 17 SRTVREAMLRDW-GSWD----DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPR------------ 79 (368)
T ss_pred CHHHHHHhCCCC-CCCC----hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCC------------
Confidence 677777765432 2211 112357799999999999974 2 456689999999999988754
Q ss_pred CCCeEEEEcCCCchhh-HHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHH
Q 019931 201 DEKIAIFSDALNHASI-IDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVEL 274 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~-~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L 274 (334)
++++|+.+..++... ...++.. |.+++.++. .|++++++.+++. .++++|++.++.|++|.+.|+++|
T Consensus 80 -~~~vlv~~~~~~~~~~~~~~~~~----g~~~~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~~~~i 153 (368)
T PRK13479 80 -DGKVLVPDNGAYGARIAQIAEYL----GIAHVVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNPLDEI 153 (368)
T ss_pred -CCeEEEEeCCchHHHHHHHHHHc----CCcEEEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccCHHHH
Confidence 245555554333332 2222322 677776653 3789999988753 256788888999999999999999
Q ss_pred HHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccc-cCCc-cEEeeC
Q 019931 275 VKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIACR 334 (334)
Q Consensus 275 ~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~~ 334 (334)
.++|+++|+++++|++|++|.. . ..+. .++|++++|++|.+ |+.| ||+.++
T Consensus 154 ~~l~~~~~~~livDa~~~~g~~---~------~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~ 207 (368)
T PRK13479 154 AAVAKRHGKRLIVDAMSSFGAI---P------IDIAELGIDALISSANKCIEGVPGFGFVIAR 207 (368)
T ss_pred HHHHHHcCCEEEEEcccccCCc---c------ccccccCceEEEecCccccccCCCceEEEEC
Confidence 9999999999999999876532 1 1222 35789999999987 6667 887653
No 301
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.60 E-value=4.2e-14 Score=138.96 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=126.2
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCC------CCccccccCchHHHHHHHHHHHhHh---C--CCcEEEeccHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMG------PRGSALICGYTNYHRLLESCLADLK---K--KEDCLLCPTGFA 176 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g------~~~sr~~~G~~~~~~~LE~~La~~~---g--~e~alv~~sG~~ 176 (334)
++.+++|+.++ ..+...|.+++++.+.-.. ...+....|. .+|++++|+++ + .+++++++++.+
T Consensus 32 ~~~~i~l~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~----~~lr~aia~~~~~~~~~~d~I~it~Ga~~ 106 (402)
T TIGR03542 32 SADIIRLGIGD-TTQPLPASVIEAFHNAVDELASEETFRGYGPEQGY----PFLREAIAENDYRGRIDPEEIFISDGAKC 106 (402)
T ss_pred CCCeEEcCCCC-CCCCCCHHHHHHHHHHHhcccccccccCCCCCCCC----HHHHHHHHHHHHhcCCCHHHEEECCCcHH
Confidence 36789999886 3555678888866543211 0111122333 55667777654 2 345666677777
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc-----------EEEEeeCCCHHHHHHH
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV-----------EVFVYKHCDMSHLKTL 245 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~-----------~v~~~~~~D~~~Le~~ 245 (334)
++..+ ..+..+ ||.|++..+.+......++.. |+ +++.++....+.+..-
T Consensus 107 al~~l-~~l~~~--------------gd~Vlv~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 167 (402)
T TIGR03542 107 DVFRL-QSLFGS--------------DNTVAVQDPVYPAYVDSNVMA----GRAGVLDDDGRYSKITYLPCTKENNFIPD 167 (402)
T ss_pred HHHHH-HHhcCC--------------CCEEEEeCCCCcchHHHHHHc----CCccccccccccceEEEeecchhhCCCCC
Confidence 77664 444443 677887777777776666655 66 7776664311111111
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCCCCccEEEecCc
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~~~~Div~~Sls 321 (334)
+.. ..++++|++.+++||+|.+.+ +++|+++|++|+++||+||+|...+++..- ..+....+ ..+..|+++|||
T Consensus 168 ~~~-~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~~~SfS 245 (402)
T TIGR03542 168 LPE-EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPG-AKECAIEFRSFS 245 (402)
T ss_pred ccc-cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCC-CcccEEEEecCc
Confidence 111 136788888899999999988 778999999999999999999865443210 11111111 112347799999
Q ss_pred ccccCCc---cEEeeC
Q 019931 322 KAAGCQG---GFIACR 334 (334)
Q Consensus 322 Ka~G~~G---G~i~~~ 334 (334)
|.||..| ||++++
T Consensus 246 K~~g~pGlRiG~~i~~ 261 (402)
T TIGR03542 246 KTAGFTGVRLGWTVVP 261 (402)
T ss_pred cccCCCCcceEEEEec
Confidence 9999877 898764
No 302
>PLN02672 methionine S-methyltransferase
Probab=99.60 E-value=7.2e-14 Score=149.96 Aligned_cols=204 Identities=13% Similarity=0.097 Sum_probs=142.0
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC-----cEEEeccHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE-----DCLLCPTGFAANMA 180 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e-----~alv~~sG~~An~~ 180 (334)
.+|..+|++..|+ ..+..+|.+++++.+.-... ....|+.++...+.+.+++.+|.+ .+++.++..+++..
T Consensus 694 ~~g~~vI~LsinE-~d~ppPp~V~eAi~eal~~~---~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 694 SQESSLIHMDVDE-SFLPVPSAVKASIFESFVRQ---NISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK 769 (1082)
T ss_pred cCCCCEEEEeCCC-CCCCCCHHHHHHHHHHHhhc---CCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence 3457899999987 46778899999876532111 113355677788999999987742 34444555556667
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++++ ||.|++..+.+..+...++.. |++++.++.. |++.|++++++. ++
T Consensus 770 ll~aLl~p--------------GD~VLVp~PtY~~Y~~~a~~~----Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--~~ 829 (1082)
T PLN02672 770 LVLCCVQE--------------GGTLCFPAGSNGTYVSAAKFL----KANFRRIPTKSSDGFKLTAKTLASTLETV--KK 829 (1082)
T ss_pred HHHHHcCC--------------CCEEEEeCCChHHHHHHHHHc----CCEEEEEecccccCCCCCHHHHHHHhccC--CC
Confidence 77877764 788888888888888777777 8888888742 567888888541 23
Q ss_pred EEEEEcCCC-CCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcc---c---ccccCCC-C-CccEEEecCc
Q 019931 254 KVVVTDSLF-SMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG---V---AEQFNCE-R-DVDICVGTLS 321 (334)
Q Consensus 254 ~lVv~e~v~-n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g---~---~~~~~~~-~-~~Div~~Sls 321 (334)
++|++.+++ ||+|.+.+ +++|+++|++||++||+||+|+...+...... + ...+... + ..-|+++|||
T Consensus 830 ~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfS 909 (1082)
T PLN02672 830 PWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLS 909 (1082)
T ss_pred CEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcH
Confidence 456666665 99999877 67788899999999999999986555321110 1 0011100 1 1237889999
Q ss_pred ccccCCc---cEEee
Q 019931 322 KAAGCQG---GFIAC 333 (334)
Q Consensus 322 Ka~G~~G---G~i~~ 333 (334)
|.|++.| ||+++
T Consensus 910 Kkf~lpGLRIGylIa 924 (1082)
T PLN02672 910 TELLSGGHEFGFLAL 924 (1082)
T ss_pred HhhccHHHHheeEEe
Confidence 9999877 99886
No 303
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=6.4e-14 Score=136.41 Aligned_cols=198 Identities=16% Similarity=0.092 Sum_probs=133.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCC--CccccccCchHHHHHHHHHHHhHhCC----------CcEEEeccHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGP--RGSALICGYTNYHRLLESCLADLKKK----------EDCLLCPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~--~~sr~~~G~~~~~~~LE~~La~~~g~----------e~alv~~sG~ 175 (334)
..+++|.+|+ ..+..+|.+++++.+. ..+. ..+. ..| ..+|+++|+++++. +.+++++++.
T Consensus 28 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G----~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~ 101 (374)
T PRK02610 28 IQLDRLDTNE-FPYDLPPDLKQKLAWLYQQGIESNRYP-DGG----HEALKQAIAEYVNESAAGSSQITPANISVGNGSD 101 (374)
T ss_pred cceeEecCCC-CCCCCCHHHHHHHHHHHhhcccccCCC-CCc----hHHHHHHHHHHhCccccccCCCCHHHEEEcCChH
Confidence 3588999987 4677889999987653 2221 1221 123 35677777777652 3467777778
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcC
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCC 249 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~ 249 (334)
+++..++.+++.+ +++.|++..+.+..+...++.. |.+++.++. .|+++|++++++.
T Consensus 102 ~al~~~~~~~~~~-------------g~~~Vlv~~P~y~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~~~~~ 164 (374)
T PRK02610 102 ELIRSLLIATCLG-------------GEGSILVAEPTFSMYGILAQTL----GIPVVRVGRDPETFEIDLAAAQSAIEQT 164 (374)
T ss_pred HHHHHHHHHHcCC-------------CCCeEEEcCCChHHHHHHHHHc----CCEEEEecCCcccCCCCHHHHHHHHHhh
Confidence 8887777766653 1236777778777777666666 788888763 2688898888642
Q ss_pred -CCCcEEEEEcCCCCCCCCccCHHHHHHHHHH-cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 250 -TMRKKVVVTDSLFSMDGDFAPMVELVKLRRK-YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 250 -~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k-~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
.+++++|++.+++||+|.+.+.+++.++.+- +++++|+||+|.... + ..........++ -|+++||||+||+.
T Consensus 165 ~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~-~---~~~~~~~~~~~~-~ivi~SfSK~~g~~ 239 (374)
T PRK02610 165 QNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFS-Q---TTLVGELAQHPN-WVILRTFSKAFRLA 239 (374)
T ss_pred cCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccC-c---cchHHHHhcCCC-EEEEEecchhccCc
Confidence 1367888888999999999987666655432 489999999997532 1 111111111122 38899999999987
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 240 GlRiG~~v~~ 249 (374)
T PRK02610 240 AHRVGYAIGH 249 (374)
T ss_pred ccceeeeecC
Confidence 7 898864
No 304
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.59 E-value=2.5e-14 Score=136.98 Aligned_cols=154 Identities=21% Similarity=0.180 Sum_probs=107.6
Q ss_pred HHHHHHHHHhHhCCC-cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE
Q 019931 152 HRLLESCLADLKKKE-DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE 230 (334)
Q Consensus 152 ~~~LE~~La~~~g~e-~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~ 230 (334)
..+|++.+++++|.+ ..+++++|+++...++..++.+ ++ |++..+.|..+...+... |.+
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~--------------g~-vl~~~p~y~~~~~~~~~~----g~~ 109 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAP--------------GR-VLVLAPTYSEYARAWRAA----GHE 109 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCC--------------Ce-EEEeCCCcHHHHHHHHHc----CCE
Confidence 378999999999964 4455555554444444333432 55 444456666666665544 788
Q ss_pred EEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 231 VFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 231 v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
++.++ |++.++++++ ++++|++++++||+|.+.+ +++|+++|+++|+++|+||+|...... ..+....
T Consensus 110 ~~~~~--d~~~l~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~~~~~~~ 180 (330)
T TIGR01140 110 VVELP--DLDRLPAALE----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---ASLAPQA 180 (330)
T ss_pred EEEeC--CHHHHHhhcc----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---cchhhHh
Confidence 88887 8999988874 4568888889999999999 666788889999999999999854332 1221111
Q ss_pred CCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+ ..+.+|+++||||+||..| ||++++
T Consensus 181 ~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~ 209 (330)
T TIGR01140 181 A-RFPGLVVLRSLTKFFGLAGLRLGFVVAH 209 (330)
T ss_pred c-cCCCEEEEEecchhhcCchhhhhheeCC
Confidence 1 1234699999999999777 888764
No 305
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.59 E-value=4.5e-14 Score=142.62 Aligned_cols=171 Identities=16% Similarity=0.179 Sum_probs=118.0
Q ss_pred ccCchHHHHHHHHHHHhHhC------CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHH
Q 019931 145 ICGYTNYHRLLESCLADLKK------KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIID 218 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g------~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~ 218 (334)
..|...+.+++.+.+.+..| .+++++++++++|+..++.+++.+ ||.|++..+.+.....
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~p--------------GD~Vlv~~P~Y~~~~~ 158 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADP--------------GDVFLIPSPYYAAFDR 158 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCC--------------CCEEEECCCCccchHH
Confidence 34444444444444444333 246777788899999999998875 8889999888887766
Q ss_pred HHHH-hhhcCCcEEEEeeCC-------CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCE
Q 019931 219 GIRI-AERTKMVEVFVYKHC-------DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFL 284 (334)
Q Consensus 219 g~~l-s~~~~g~~v~~~~~~-------D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~ 284 (334)
.+.. . |++++.++.. |++++++.+++. ..++++|++.+++||+|.+.+ +++|+++|++|+++
T Consensus 159 ~~~~~~----G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~ 234 (496)
T PLN02376 159 DLRWRT----GVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIH 234 (496)
T ss_pred HHHhhC----CCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 5553 3 7888888751 578887664321 236788888899999999988 66788899999999
Q ss_pred EEEecCcccccccCCC-cccccc---cCC---CCCccEEEecCcccccCCc---cEEee
Q 019931 285 LVLDDAHGTFVCGKNG-GGVAEQ---FNC---ERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 285 LivDeAh~~Gv~G~~G-~g~~~~---~~~---~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
||+||+|+..++.... ..+.+. ++. .++.-+++.||||.||..| ||+++
T Consensus 235 lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~ 293 (496)
T PLN02376 235 LVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYS 293 (496)
T ss_pred EEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEE
Confidence 9999999976553211 111111 011 1122256799999999777 88876
No 306
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.59 E-value=6e-14 Score=139.64 Aligned_cols=163 Identities=17% Similarity=0.170 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
+...+||+++++++|.+++++++||++|+..++.+++.+- ++ ....++||.|++..+.|.+....+... |+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~--~~---~~~~~pGd~VIv~~~t~~a~~~~v~~~----G~ 133 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPK--LG---DRALKPGDEVITVAAGFPTTVNPIIQN----GL 133 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhcc--cc---ccCCCCCCEEEECCCCcHHHHHHHHHc----CC
Confidence 5578999999999999999999999999999998874210 00 000124889999999999888887766 78
Q ss_pred EEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccc
Q 019931 230 EVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 230 ~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
+++.++. .|++++++++.+ ++++|++.++ .|.+.++++|.++|+++|++||+|++|+.|..- .|+..
T Consensus 134 ~pv~vdvd~~~~~id~~~le~~i~~---~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~-~g~~~ 206 (438)
T PRK15407 134 VPVFVDVELPTYNIDASLLEAAVSP---KTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY-DGRMT 206 (438)
T ss_pred EEEEEecCCCcCCcCHHHHHHHcCc---CCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhc-CCeee
Confidence 7777653 278888888864 7888888765 466889999999999999999999999987532 12211
Q ss_pred ccccCCCCCccEEEecC--ccccc-CCccEEeeC
Q 019931 304 AEQFNCERDVDICVGTL--SKAAG-CQGGFIACR 334 (334)
Q Consensus 304 ~~~~~~~~~~Div~~Sl--sKa~G-~~GG~i~~~ 334 (334)
. .+| |+.+.|| +|.+. +.||+|+++
T Consensus 207 G-~~g-----d~~~fSf~~~k~~~~geGG~l~t~ 234 (438)
T PRK15407 207 G-TFG-----DIATLSFYPAHHITMGEGGAVFTN 234 (438)
T ss_pred e-ccC-----ceEEEeCCCCCCccccCceEEEEC
Confidence 1 122 6777788 46664 368998863
No 307
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.58 E-value=4.5e-14 Score=141.75 Aligned_cols=151 Identities=18% Similarity=0.111 Sum_probs=109.5
Q ss_pred CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH-hhhcCCcEEEEeeCC-------
Q 019931 166 EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI-AERTKMVEVFVYKHC------- 237 (334)
Q Consensus 166 e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l-s~~~~g~~v~~~~~~------- 237 (334)
+++++++++.+++..++.+++.+ ||.|++..+.+......+.. . |++++.++..
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~p--------------Gd~Vlv~~P~Y~~~~~~~~~~~----g~~~v~v~~~~~~~~~~ 173 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEP--------------GDAFLLPTPYYPGFDRDLKWRT----GVEIVPIHCSSSNGFQI 173 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCC--------------CCEEEECCCCCCchHHHHhhcC----CcEEEEEecCCccCCcC
Confidence 45777788888999999888765 88899888888777665553 4 7888887642
Q ss_pred CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-Cccccccc---
Q 019931 238 DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQF--- 307 (334)
Q Consensus 238 D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~--- 307 (334)
|++.+++.+++. ..++++|++.+++||+|.+.+ +++|.++|++|+++||+||+|+..++... -.......
T Consensus 174 ~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~ 253 (468)
T PLN02450 174 TESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDR 253 (468)
T ss_pred CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhc
Confidence 568888877642 236788888899999999988 66788899999999999999986555321 11111111
Q ss_pred ---CC-CCCccEEEecCcccccCCc---cEEeeC
Q 019931 308 ---NC-ERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 308 ---~~-~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+. ..+.-+++.||||.||..| ||++++
T Consensus 254 ~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~ 287 (468)
T PLN02450 254 KLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSN 287 (468)
T ss_pred ccccCCCCCcEEEEEeccccCCCCCccEEEEEEC
Confidence 11 1223488999999998777 898864
No 308
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.58 E-value=4e-14 Score=135.70 Aligned_cols=159 Identities=16% Similarity=0.078 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 151 YHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 151 ~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
...+|+++|++++|. +.+++++++.+++..++. +..+ +++|+. .+.+......++.. |
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~--------------~~vv~~-~P~y~~y~~~~~~~----G 100 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINV--------------GNIIIV-EPNFNEYKGYAFTH----G 100 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCC--------------CcEEEe-CCChHHHHHHHHHc----C
Confidence 358899999999985 346677777888887775 4443 566776 56666777777666 8
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCc-ccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG-GVA 304 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~-g~~ 304 (334)
++++.++.++.+...+.+++ .++++|++++++||+|.+.+ +++|+++|+++++++|+||++....++ +. ...
T Consensus 101 ~~v~~vp~~~~~~~~~~l~~--~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~--~~~~~~ 176 (332)
T PRK06425 101 IRISALPFNLINNNPEILNN--YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPN--RAEEDV 176 (332)
T ss_pred CeEEEEeCCcccCcHHHHhh--cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccc--cchhHH
Confidence 88888876422111233432 26788888899999999888 566778889999999999999864332 21 111
Q ss_pred cccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 305 EQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
....-.+ .-|+++||||+||..| ||++++
T Consensus 177 ~~~~~~~-~vi~~~SfSK~~~l~GlRiGy~v~~ 208 (332)
T PRK06425 177 LLNRSYG-NVIIGRSLTKILGIPSLRIGYIATD 208 (332)
T ss_pred HHhccCC-CEEEEeecHHhcCCchhhheeeecC
Confidence 1111112 2488999999999888 998864
No 309
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.57 E-value=8.2e-14 Score=140.77 Aligned_cols=204 Identities=16% Similarity=0.100 Sum_probs=130.4
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHH-HHHHhHhC----C-C--cEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLE-SCLADLKK----K-E--DCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE-~~La~~~g----~-e--~alv~~sG~~An~~ 180 (334)
++.++++-++ +++..++.+.++++.. .|. .+....|..+..+++- +.+.+..+ . + ++++++++++|+..
T Consensus 94 ~~~i~l~~g~-p~~~~~~~~~~~~~~~-~~~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~ 170 (521)
T TIGR03801 94 RDIISYVIDQ-LGFDPDAFLYEMCDGI-IGD-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCY 170 (521)
T ss_pred HHHHhhcCCC-CCCCCCHHHHHHHHHh-hcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHH
Confidence 5667777775 6887555444444432 232 2333344445544443 33333322 1 2 57788889999998
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------------CCHHHHHHHHhc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------------CDMSHLKTLLSC 248 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------------~D~~~Le~~l~~ 248 (334)
++.+++... ++ .+||.|++..+.+..+...+.+.. .+.+++.++. .|.++|++++.
T Consensus 171 ~~~~l~~~~-ll--------~pGD~Vlv~~P~y~~y~~~~~l~~--~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~- 238 (521)
T TIGR03801 171 IFDSLKANE-LL--------KKGDKIALMTPIFTPYLEIPELPR--YDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD- 238 (521)
T ss_pred HHHHHhHhh-cC--------CCCCEEEEeCCCcHHHHHHHHHhc--CCcEEEEeecccccccccccCCCCHHHHHHhcC-
Confidence 887732100 00 138888888888777776665541 1456655542 15577777654
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa 323 (334)
+++++|++.+|+||+|.+.+ +++|+++|++| ++++|+||+|+..+. ....+.. ..++..|++.||||+
T Consensus 239 --~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~---~~~~~vI~v~SfSK~ 311 (521)
T TIGR03801 239 --PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFA---ELPYNTIGVYSFSKY 311 (521)
T ss_pred --CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhh---hCCCCEEEEEcchhh
Confidence 37899998899999999988 77788889987 999999999986432 1111211 223345899999999
Q ss_pred ccCCc---cEEeeC
Q 019931 324 AGCQG---GFIACR 334 (334)
Q Consensus 324 ~G~~G---G~i~~~ 334 (334)
||+.| ||++++
T Consensus 312 fg~~G~RlG~i~~~ 325 (521)
T TIGR03801 312 FGATGWRLGTIALH 325 (521)
T ss_pred ccCchhhhhhhhcC
Confidence 99988 888753
No 310
>PLN03032 serine decarboxylase; Provisional
Probab=99.57 E-value=2.6e-13 Score=132.31 Aligned_cols=167 Identities=13% Similarity=0.144 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHhHhCCC--cE--EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 149 TNYHRLLESCLADLKKKE--DC--LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e--~a--lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
....+++.+.+++++|.+ .+ +++++|++||..++.+.... .++.+|++....|.|+...+++.
T Consensus 65 ~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~------------~~~~~vi~s~~~H~Sv~kaa~~l- 131 (374)
T PLN03032 65 RQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREV------------FPDGILYASRESHYSVFKAARMY- 131 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHh------------CCCcEEEeCCCceeHHHHHHHHc-
Confidence 456677888888889864 33 78899999999888764321 02357888999999999888876
Q ss_pred hcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC-----CEEEEecCcccc
Q 019931 225 RTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG-----FLLVLDDAHGTF 294 (334)
Q Consensus 225 ~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g-----a~LivDeAh~~G 294 (334)
+..+..++. -|+++|++++++...++.+|++...++++|.+.|+++|.++|+++| +|+++|.|++.+
T Consensus 132 ---g~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~ 208 (374)
T PLN03032 132 ---RMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGL 208 (374)
T ss_pred ---CCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhh
Confidence 444444432 3899999999864335778888888899999999999999999997 599999999876
Q ss_pred cccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEee
Q 019931 295 VCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIAC 333 (334)
Q Consensus 295 v~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~ 333 (334)
.+--... ...+.....+|.++.|.+|.+| +.| |++..
T Consensus 209 ~~p~~~~--~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~ 247 (374)
T PLN03032 209 MMPFVSR--APEVTFRKPIGSVSVSGHKFLGCPMPCGVALT 247 (374)
T ss_pred hhhccCC--CcccCCCcCCcEEEECcccccCCCcCeEEEEE
Confidence 4421000 0112223358999999999998 555 55543
No 311
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.57 E-value=7.2e-14 Score=134.28 Aligned_cols=192 Identities=10% Similarity=0.012 Sum_probs=131.8
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC-----CCcEEEeccHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK-----KEDCLLCPTGFAANMAV 181 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g-----~e~alv~~sG~~An~~a 181 (334)
.++..++|+.|+ -.+..+|.+++++.+.-.....++ +. .+...+|+++++++++ .+++++++++.+++..+
T Consensus 17 ~~~~~i~l~~~~-~~~~~p~~~~~~~~~~~~~~~~~~-Y~--~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~ 92 (335)
T PRK14808 17 EKRDRTYLALNE-NPFPFPEDLVDEVFRRLNSDTLRI-YY--DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVM 92 (335)
T ss_pred CCCceeEecCCC-CCCCCCHHHHHHHHHHhhhhhhhc-CC--CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHH
Confidence 447889999887 467778999997765322111111 11 1234778899999887 34567777788888888
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC-HHHHHHHHhcCCCCcEEEEEcC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD-MSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D-~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
+.++ |.|++..+.+..+...++.. |.+++.++..+ ....+..+ .++++|++.+
T Consensus 93 ~~~~------------------d~v~v~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~----~~~~~i~i~n 146 (335)
T PRK14808 93 MLMF------------------DRSVFFPPTYSCYRIFAKAV----GAKFLEVPLTKDLRIPEVNV----GEGDVVFIPN 146 (335)
T ss_pred HHHh------------------CcEEECCCCHHHHHHHHHHc----CCeEEEecCCCcCCCChhHc----cCCCEEEEeC
Confidence 7754 12666778888888777777 88888887531 10001112 1468999999
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.+.+++.+|+ +++++||+||+|... .+. .........+. -|+++||||+||..| ||++++
T Consensus 147 P~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f-~~~---~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~ 217 (335)
T PRK14808 147 PNNPTGHVFEREEIERIL-KTGAFVALDEAYYEF-HGE---SYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSS 217 (335)
T ss_pred CCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhh-cCC---chHHHHHhCCC-EEEEEechhhccCcccceEEEEeC
Confidence 999999999999999998 589999999999852 221 11111111122 488999999999888 999874
No 312
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.5e-13 Score=133.15 Aligned_cols=192 Identities=19% Similarity=0.128 Sum_probs=136.7
Q ss_pred eEEEeecCc-cCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC-CC--cEEEeccHHHHHHHHHHHH
Q 019931 110 RLLLFSGND-YLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK-KE--DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 110 ~~l~f~sn~-yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e--~alv~~sG~~An~~ai~al 185 (334)
..++|++|. .+|. +|.+++++++..... .|+-- +...+|+++++++++ .+ .+++.++..+.+..+++++
T Consensus 23 ~~i~LssNenP~gp--~~~~~~~~~~~~~~~--~rYPd---~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNENPYGP--PPKVIEAIRAALDKL--NRYPD---PDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCCCCCC--CHHHHHHHHHHHHhh--ccCCC---CcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh
Confidence 588999994 4554 588888776543211 12211 235889999999998 43 4555677778888888877
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+.+ ||.|+...+.+......++.. |++++.++. .|++.+...+.+ ++++|++++|
T Consensus 96 ~~~--------------gd~vl~~~Ptf~~Y~~~a~~~----g~~~~~v~~~~~~~d~~~~~~~~~~---~~~lv~i~nP 154 (356)
T COG0079 96 VEP--------------GDTVLIPEPTFSMYEIAAQLA----GAEVVKVPLKEFRLDLDAILAAIRD---KTKLVFLCNP 154 (356)
T ss_pred hcC--------------CCEEEEcCCChHHHHHHHHhc----CCeEEEecccccccCHHHHHHhhhc---CCCEEEEeCC
Confidence 764 677887777777666666666 888888876 466777666654 6899999999
Q ss_pred CCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+||+|...+.++|.++++.. +.+||+|||+.- |.+ ........ .++.-|++-||||+||..| ||++++
T Consensus 155 NNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~e--F~~--~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 155 NNPTGTLLPREELRALLEALPEGGLVVIDEAYIE--FSP--ESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhh--cCC--chhhhhcc-CCCCEEEEEecHHhhhcchhceeeccCC
Confidence 99999999988888888765 789999999986 332 11111111 2222388999999999988 887653
No 313
>PRK15029 arginine decarboxylase; Provisional
Probab=99.57 E-value=5.5e-14 Score=146.74 Aligned_cols=160 Identities=18% Similarity=0.121 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
-...+.|+.+|+++|++++.+..+| +.+|.+++.+++++ ||.|++++.+|.|+.+++.++ +
T Consensus 205 G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~--------------gd~Vlv~RN~HKSv~~al~L~----g 266 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTD--------------NDVVVVDRNCHKSIEQGLILT----G 266 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCC--------------CCEEEeecccHHHHHHHHHHc----C
Confidence 3458999999999999998776544 67899999988865 899999999999999999999 8
Q ss_pred cEEEEeeC----------CC-----HHHHHHHHhcCCCC-------c-EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEE
Q 019931 229 VEVFVYKH----------CD-----MSHLKTLLSCCTMR-------K-KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLL 285 (334)
Q Consensus 229 ~~v~~~~~----------~D-----~~~Le~~l~~~~~~-------~-~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~L 285 (334)
++++++.. .+ ++.+++.|++.+.. + .+|++.+.| +|.+.++++|+++|+++|+.|
T Consensus 267 a~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~di~~I~~~~h~~~~~l 344 (755)
T PRK15029 267 AKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYNAKEAQDLLEKTSDRL 344 (755)
T ss_pred CeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeCHHHHHHHHHhcCCeE
Confidence 88777642 13 88999999775421 1 355555544 899999999999999999999
Q ss_pred EEecCcccccccCCCcccccccCC-----C-CCcc-EEEecCcccccC--CccEE
Q 019931 286 VLDDAHGTFVCGKNGGGVAEQFNC-----E-RDVD-ICVGTLSKAAGC--QGGFI 331 (334)
Q Consensus 286 ivDeAh~~Gv~G~~G~g~~~~~~~-----~-~~~D-iv~~SlsKa~G~--~GG~i 331 (334)
+|||||+.- ++-. ..+..+..+ . .++| +++-|.+|++++ +|+++
T Consensus 345 lvDEAhGah-~~F~-~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~L 397 (755)
T PRK15029 345 HFDEAWYGY-ARFN-PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYI 397 (755)
T ss_pred EEECccccc-cccC-ccccccccccccccccCCCceEEEEchhhcccchhhhhhh
Confidence 999999853 2211 111111223 2 4577 999999999986 34443
No 314
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.56 E-value=8.9e-14 Score=148.78 Aligned_cols=161 Identities=14% Similarity=0.086 Sum_probs=128.7
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEeccHH----HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHH
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLCPTGF----AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGI 220 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~~sG~----~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~ 220 (334)
..|+.....++++.|++++|.+.+.+.++++ .|+..+++++.++ +++ +..++|++....|++....+
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~-----~Gd----~~r~~vli~~~aH~sn~a~a 633 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLS-----RGD----HHRNVCIIPVSAHGTNPASA 633 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhc-----cCC----CCCCEEEeCCCcCccCHHHH
Confidence 4567788899999999999998888886555 6888888887653 000 01238888899999988777
Q ss_pred HHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccc
Q 019931 221 RIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 221 ~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv 295 (334)
... |.+++.++.+ |+++|++++++.++++++|++..++|..|...|+++|.++|+++|+++++|.||..+.
T Consensus 634 ~~~----G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~ 709 (993)
T PLN02414 634 AMC----GMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ 709 (993)
T ss_pred HHC----CCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc
Confidence 765 8888888753 8999999998654478999999999999999999999999999999999999998765
Q ss_pred ccCCCcccccccCCCCCccEEEecCccccc
Q 019931 296 CGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 296 ~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
.+..- .-.-++||+++|.+|+|+
T Consensus 710 ~~l~~-------p~~~GaD~~~~s~HK~f~ 732 (993)
T PLN02414 710 VGLTS-------PGFIGADVCHLNLHKTFC 732 (993)
T ss_pred cCcCC-------ccccCCCEEEecCCccCC
Confidence 43211 112468999999999886
No 315
>PRK02769 histidine decarboxylase; Provisional
Probab=99.56 E-value=2.5e-13 Score=132.86 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHhHhCCC--c--EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 149 TNYHRLLESCLADLKKKE--D--CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e--~--alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
....+++.+.+++++|.+ . ..++++|+++|..++.+.... .+++.|++....|.|+...++..
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~------------~~~~~ii~s~~~H~Sv~ka~~~l- 130 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLAREL------------FPDGTLYYSKDTHYSVSKIARLL- 130 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHh------------CCCcEEEeCCCceehHHHHHHHc-
Confidence 455567778889999864 3 367788899998776543321 13578888899999998888766
Q ss_pred hcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC---CEEEEecCcccccc
Q 019931 225 RTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG---FLLVLDDAHGTFVC 296 (334)
Q Consensus 225 ~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g---a~LivDeAh~~Gv~ 296 (334)
+.+...++. .|+++|++++++.+.++++|++...++++|.+.|+++|.++|++|| +++++|.||+.+++
T Consensus 131 ---g~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~ 207 (380)
T PRK02769 131 ---RIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMIL 207 (380)
T ss_pred ---CCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceee
Confidence 333333332 3899999999875445889999999999999999999999999998 69999999997754
Q ss_pred cCCCcccccccCCCCCccEEEecCccccc-CCc-cEEe
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIA 332 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~ 332 (334)
... .. ...+....++|.++.|.+|.+| +.| |++.
T Consensus 208 p~~-~~-~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~ 243 (380)
T PRK02769 208 PFV-NN-PPPFSFADGIDSIAISGHKFIGSPMPCGIVL 243 (380)
T ss_pred ccc-Cc-cccCCccCCCCEEEECCcccCCCCCCcEEEE
Confidence 210 00 0013333478999999999987 444 5543
No 316
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.55 E-value=2.5e-13 Score=136.76 Aligned_cols=193 Identities=16% Similarity=0.150 Sum_probs=130.9
Q ss_pred EeecCccCCCCCCHHHHHHHHHhc--CCCCcc---ccccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHh
Q 019931 113 LFSGNDYLGLSSHPTIAKAAARHG--MGPRGS---ALICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVG 186 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~~~g--~g~~~s---r~~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~ 186 (334)
+|.+-.|-.+..+|.+++++.+.. .+.+.+ ....|....+.++++.+++++|.+.+.++ ++|+.+....+.++.
T Consensus 71 ~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r 150 (481)
T PRK04366 71 GFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIR 150 (481)
T ss_pred ceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHH
Confidence 343433444556788888664421 233333 35667778889999999999998876666 567666554333211
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
.. +..+++ .+++.|++....|.+....+... |.+++.++. .|+++|++++.+ ++++|++.++
T Consensus 151 ~~--~~~~Gd----~~~~~Vlv~~~~hp~~~~~~~~~----G~~vv~v~~~~~~~~D~e~L~~~i~~---~t~~V~v~~P 217 (481)
T PRK04366 151 AY--HEARGD----TKRTEVIVPDSAHGTNPASAAMA----GFKVVEIPSNEDGLVDLEALKAAVGE---DTAALMLTNP 217 (481)
T ss_pred HH--hhccCc----CCCCEEEEcCCccHhHHHHHHHc----CCEEEEeecCCCCCcCHHHHHhhccc---CCeEEEEeCC
Confidence 10 000110 01346777778999988777665 788887764 378888888864 6788888777
Q ss_pred CCCCCCc-cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC
Q 019931 262 FSMDGDF-APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 262 ~n~~G~~-~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+ ++|.+ .|+++|.++|+++|+++++|.||..+.+|.... + ..++|+++++.+|.||.
T Consensus 218 n-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~------~-~~GaD~~~~~~hK~l~~ 275 (481)
T PRK04366 218 N-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARP------G-DMGFDVVHLNLHKTFST 275 (481)
T ss_pred C-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCc------c-ccCCCEEEEechhhcCC
Confidence 6 78977 589999999999999999999998665543111 1 23579999999999874
No 317
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.54 E-value=4.9e-13 Score=121.88 Aligned_cols=196 Identities=18% Similarity=0.137 Sum_probs=146.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccc-cC-----c-hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALI-CG-----Y-TNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~-~G-----~-~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
+.+||.-.-.-=|+ -.++.++|+.+||.|.+-.-+. .| . .++++-+|+ |++|+|.+.+-++++.-+|-+++
T Consensus 15 r~~iNv~PiQrGGi-Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~d-laeFlg~D~~R~t~GARe~Kfav 92 (382)
T COG1103 15 RGFINVNPIQRGGI-LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLED-LAEFLGMDEVRVTAGAREAKFAV 92 (382)
T ss_pred cCccccChhhccCc-CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHH-HHHHhCCceeeecccchhhHHHH
Confidence 44555433222233 3678888999999986432222 12 1 344444554 99999999999999999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhc----CC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSC----CT 250 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~----~~ 250 (334)
+.+++.+ ||.|+.|.+.|.+..-+...+ |.++..+++. +++...+.|++ ..
T Consensus 93 Mhal~~~--------------gd~vV~D~~aHYttyvAAEra----gl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g 154 (382)
T COG1103 93 MHALCKE--------------GDWVVVDSLAHYTTYVAAERA----GLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGG 154 (382)
T ss_pred HHHhccC--------------CCEEEEcCcchHHHHHHHHhc----CCeEEecCCCCCCceEecHHHHHHHHHHHHhccC
Confidence 9999975 899999999999987777766 7888888754 45554444443 22
Q ss_pred CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--
Q 019931 251 MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
..+.+.++.++-+..|+++|.++++++|+++|+.|++..|++.|.+.- .+.+.++|++++|-+|++++.|
T Consensus 155 ~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpv--------s~ke~g~DFiVgSGHKsmAAs~Pi 226 (382)
T COG1103 155 DPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPV--------SGKEIGADFIVGSGHKSMAASAPI 226 (382)
T ss_pred CCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccc--------cccccCCCEEEecCccchhccCCe
Confidence 457888888898889999999999999999999999999999875421 2334678999999999998766
Q ss_pred cEEe
Q 019931 329 GFIA 332 (334)
Q Consensus 329 G~i~ 332 (334)
|+++
T Consensus 227 Gvl~ 230 (382)
T COG1103 227 GVLA 230 (382)
T ss_pred eEEe
Confidence 5554
No 318
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.54 E-value=2.1e-13 Score=136.08 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=110.3
Q ss_pred CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CC
Q 019931 166 EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CD 238 (334)
Q Consensus 166 e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D 238 (334)
+++++++++++|+..++.+++.+ ||.|++..+++......+... .+++++.++. .|
T Consensus 121 ~~Ivit~G~t~al~~l~~~l~~p--------------GD~Vlv~~P~Y~~f~~~~~~~---~g~~vv~v~~~~~~~f~~~ 183 (447)
T PLN02607 121 DRIVLTAGATAANELLTFILADP--------------GDALLVPTPYYPGFDRDLRWR---TGVKIVPIHCDSSNNFQVT 183 (447)
T ss_pred HHeEEcCChHHHHHHHHHHhCCC--------------CCEEEEcCCCCcchHHHHHhc---CCcEEEEEeCCCCCCCcCC
Confidence 35677788889999988888765 788888888887766555432 1677777753 26
Q ss_pred HHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccc---cC
Q 019931 239 MSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQ---FN 308 (334)
Q Consensus 239 ~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~---~~ 308 (334)
++.+|+++++. ..++++|++.+|+||+|.+.+ +++|+++|++|+++||+||+|+..+++... ..+.+. .+
T Consensus 184 ~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~ 263 (447)
T PLN02607 184 PQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARG 263 (447)
T ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcC
Confidence 78898888642 236788888999999999888 778899999999999999999977775321 111111 11
Q ss_pred C-C-CCccEEEecCcccccCCc---cEEee
Q 019931 309 C-E-RDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 309 ~-~-~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
. . ++.-+++.||||.||..| |++++
T Consensus 264 ~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs 293 (447)
T PLN02607 264 YKGVAERVHIVYSLSKDLGLPGFRVGTIYS 293 (447)
T ss_pred CCCCcCcEEEEEcchhcCCCCcceEEEEEE
Confidence 1 1 222378899999999877 88875
No 319
>PLN02231 alanine transaminase
Probab=99.54 E-value=4.6e-13 Score=136.35 Aligned_cols=176 Identities=15% Similarity=0.155 Sum_probs=122.2
Q ss_pred ccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhh
Q 019931 141 GSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASI 216 (334)
Q Consensus 141 ~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~ 216 (334)
++....|...+.+.+.+.+.+..| .+++++++++++|+..++.+++.. +||.|++..+.+...
T Consensus 163 ~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~-------------~gd~Vli~~P~Y~~y 229 (534)
T PLN02231 163 AYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------------EKDGILCPIPQYPLY 229 (534)
T ss_pred CcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccC-------------CCCEEEEeCCCChhH
Confidence 344455655555555555544434 356788888899999999988742 378888888888877
Q ss_pred HHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCC
Q 019931 217 IDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGF 283 (334)
Q Consensus 217 ~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga 283 (334)
...+... +++++.|+.+ |+++|++.+++.. .++++|++.+++||+|.+.+ +++|+++|++||+
T Consensus 230 ~~~~~~~----g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l 305 (534)
T PLN02231 230 SASIALH----GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGL 305 (534)
T ss_pred HHHHHHc----CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 7777766 7788877532 7899999886531 15788888899999999887 6788999999999
Q ss_pred EEEEecCcccccccCCCc--ccccc---cCCC-CC-ccEEEecCcccc-cC---CccEEee
Q 019931 284 LLVLDDAHGTFVCGKNGG--GVAEQ---FNCE-RD-VDICVGTLSKAA-GC---QGGFIAC 333 (334)
Q Consensus 284 ~LivDeAh~~Gv~G~~G~--g~~~~---~~~~-~~-~Div~~SlsKa~-G~---~GG~i~~ 333 (334)
+||+||+|...++..... .+... .+.. .+ .-|+++||||+| |. .+||+++
T Consensus 306 ~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 306 VLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred EEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 999999999876632111 11111 1111 11 137789999986 43 5599864
No 320
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=2.5e-13 Score=131.89 Aligned_cols=159 Identities=18% Similarity=0.065 Sum_probs=112.0
Q ss_pred HHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCC-eEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 152 HRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEK-IAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 152 ~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~g-d~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
..+|++.++++++. +++++++++++++..++.+++.+ + +.|++..+.+..+....+.. |
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~--------------g~~~vlv~~p~y~~~~~~~~~~----g 122 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVP--------------GRDAVLVTPPVFGMYAVCARLQ----N 122 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCC--------------CCCeEEEcCCChHHHHHHHHHc----C
Confidence 37899999999985 34667777788988888887764 4 67777777766554444444 7
Q ss_pred cEEEEeeCC--------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccC
Q 019931 229 VEVFVYKHC--------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 229 ~~v~~~~~~--------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~ 298 (334)
.+++.++.. |++++++.+.. +++++|++.+++||+|.+.|.+++.++++. +++++|+||+|......+
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~ 200 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP 200 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc
Confidence 888887742 34555443322 368888888999999999998888887765 478999999998543211
Q ss_pred CCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 299 NGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 299 ~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
.........++ -|+++||||+||..| ||++++
T Consensus 201 ---~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~ 235 (364)
T PRK04781 201 ---SAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIAN 235 (364)
T ss_pred ---chHHHHhhCCC-EEEEecChhhcccccceeeeeeCC
Confidence 11111121233 388999999999777 898864
No 321
>PRK07908 hypothetical protein; Provisional
Probab=99.53 E-value=5.1e-13 Score=128.70 Aligned_cols=192 Identities=17% Similarity=0.081 Sum_probs=124.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al 185 (334)
++.++||+.|.. .+..++.+++++.+.-.....+.... -..+|++.++++++. ++.++++++++++..++.
T Consensus 21 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~----g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-- 93 (349)
T PRK07908 21 GPGLLDFAVNVR-HDTPPEWLRERLAARLGDLAAYPSTE----DERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-- 93 (349)
T ss_pred CCCeEEecCCCC-CCCCCHHHHHHHHHHhhHhhcCCCcc----chHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--
Confidence 478999999863 45568888887765422212222222 246788899998874 456677777888777665
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC-H-HHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD-M-SHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D-~-~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
+.+ +++++. .+.+......++.. |.+++.++..+ . -+++ .++ .++++|++.+++|
T Consensus 94 l~~--------------~~viv~-~P~y~~~~~~~~~~----G~~i~~v~~~~~~~~d~~-~l~---~~~~~i~l~np~N 150 (349)
T PRK07908 94 LRP--------------RRAAVV-HPSFTEPEAALRAA----GIPVHRVVLDPPFRLDPA-AVP---DDADLVVIGNPTN 150 (349)
T ss_pred cCC--------------CeEEEe-CCCChHHHHHHHHc----CCEEEeeccCcccCcChh-Hhc---cCCCEEEEcCCCC
Confidence 332 566554 34444444444444 78888776531 1 0122 232 2578898999999
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
|+|.+.|.++|.++|++ +.++|+||+|..-+.+. -..+. ....+..|+++||||.||+.| ||++++
T Consensus 151 PTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~-~~~l~---~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~ 219 (349)
T PRK07908 151 PTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGE-PESLA---GDDLPGVLVLRSLTKTWSLAGLRVGYALGA 219 (349)
T ss_pred CCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCC-ccccc---cccCCCEEEEeecccccCCccceeeeeecC
Confidence 99999999999999975 78899999998533221 11111 112222488899999999766 898764
No 322
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.53 E-value=5.1e-13 Score=132.59 Aligned_cols=166 Identities=14% Similarity=0.109 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhHhCCC---cEEEeccHH-HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh
Q 019931 150 NYHRLLESCLADLKKKE---DCLLCPTGF-AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER 225 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e---~alv~~sG~-~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~ 225 (334)
.+..+||+.+++++|.+ .++++++|+ +++..++.++... .-+++.|+..+..|.++..++.+.
T Consensus 105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----------~~~gd~VI~p~~th~S~~kAi~~~-- 171 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----------RPKAKYVIWPRIDQKSCIKAISTA-- 171 (444)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----------CCCCCEEEEECcChHHHHHHHHHc--
Confidence 56689999999999987 789999999 7888777664321 003678888888999999999988
Q ss_pred cCCcEEEEeeC--------CCHHHHHHHHhcCCCCcEEE-EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 226 TKMVEVFVYKH--------CDMSHLKTLLSCCTMRKKVV-VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 226 ~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~lV-v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
|++++.++. .|+++|+++|++...+++++ +..+.+...|.+.|+++|.++|++||++||+|+||+.+..
T Consensus 172 --G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~ 249 (444)
T TIGR03531 172 --GFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN 249 (444)
T ss_pred --CCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh
Confidence 888887772 28999999998543234444 4444344456889999999999999999999999986421
Q ss_pred cCCCcccccccCCC-CCccEEEecCcccccCC--ccEEee
Q 019931 297 GKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQ--GGFIAC 333 (334)
Q Consensus 297 G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~--GG~i~~ 333 (334)
. -.... ..+.. ..+|+++.|++|.+.+. ||+|++
T Consensus 250 -~-~~~~~-~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~ 286 (444)
T TIGR03531 250 -K-YMELI-NKAIKVGRVDAVVSSTDKNFMVPVGGAIIYS 286 (444)
T ss_pred -h-hhhhh-hccccccCCCeEEEeCccCCCCCCCEEEEEE
Confidence 0 00000 01122 24689999999999863 455544
No 323
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.52 E-value=4.2e-13 Score=129.23 Aligned_cols=180 Identities=17% Similarity=0.120 Sum_probs=116.9
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~An~~ai~a 184 (334)
.++++|++| +.+|.+..+....++.+|- .+. .+|.++|++++|. +++++++++.+++..+. .
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~~~~~~Yp------------~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~ 89 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPADAWRRLP------------EDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-A 89 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCHHHHHhCC------------Cch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-H
Confidence 467899998 4566653332222333321 123 7899999999986 34566666677766443 3
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCC
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSM 264 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~ 264 (334)
++.+ ++ |++..+.+..+...++.. |++++.++.++ +. +.+ .++++++.+|+||
T Consensus 90 ~~~~--------------g~-v~v~~P~y~~y~~~~~~~----g~~~~~v~~~~-~~----~~~---~~~~v~l~nPnNP 142 (339)
T PRK06959 90 LLPR--------------GR-VGIAPLAYSEYAPAFARH----GHRVVPLDEAA-DT----LPA---ALTHLIVVNPNNP 142 (339)
T ss_pred hcCC--------------Ce-EEEcCCCcHHHHHHHHHC----CCEEEeecccc-hh----ccc---cCCEEEEeCCCCC
Confidence 4432 66 445666777777777766 88888876543 22 211 3567888889999
Q ss_pred CCCccCHHHHHHH---HHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 265 DGDFAPMVELVKL---RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 265 ~G~~~pL~~L~el---a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+|.+.+.+++.++ |++++.++|+||+|...... ..+..... .++ -|+++||||+||..| ||++++
T Consensus 143 TG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~~-~~~-vi~l~SfSK~~gl~GlRiGy~v~~ 213 (339)
T PRK06959 143 TAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHTD-RPG-LVVLRSVGKFFGLAGVRAGFVLAA 213 (339)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhccC-CCC-EEEEecChhhcCCcchheEEEecC
Confidence 9999886665554 56789999999999864221 11111111 133 389999999999888 998874
No 324
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.51 E-value=9.9e-13 Score=131.73 Aligned_cols=204 Identities=16% Similarity=0.151 Sum_probs=138.2
Q ss_pred eeEEEeecCccC-CCCCCHHHHHHHHH----hcCC-CCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHH
Q 019931 109 KRLLLFSGNDYL-GLSSHPTIAKAAAR----HGMG-PRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yL-gl~~~p~v~~a~~~----~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An 178 (334)
...++|+.+... .+-....+++++.+ +... ...+....|..++.+.+.+.+....| .++++++++...|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 567788776411 22223344443322 2222 12223335555666666666654444 24677778888899
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcE
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~ 254 (334)
..+++.++.+ ||.|+++.+.|......++.. |.+++.++.+ |+++||++++.. +.|
T Consensus 169 ~l~~~~l~~p--------------Gd~v~vE~PtY~~~~~~~~~~----g~~~~~vp~d~~G~~~e~le~~~~~~--~~k 228 (459)
T COG1167 169 DLLLRLLLDP--------------GDTVLVEDPTYPGALQALEAL----GARVIPVPVDEDGIDPEALEEALAQW--KPK 228 (459)
T ss_pred HHHHHHhCCC--------------CCEEEEcCCCcHHHHHHHHHc----CCcEEecCCCCCCCCHHHHHHHHhhc--CCc
Confidence 9888888765 899999999988888777766 8888888754 899999999864 455
Q ss_pred E-EEEcCCCCCCCCccCHH---HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccC--C
Q 019931 255 V-VVTDSLFSMDGDFAPMV---ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGC--Q 327 (334)
Q Consensus 255 l-Vv~e~v~n~~G~~~pL~---~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~--~ 327 (334)
+ +++-+-+||+|.+.+++ +|.++|++|++++|.||.++...+.. ........+. ++.-|.++||||++.+ .
T Consensus 229 ~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~ld~~~rViy~gSFSK~l~PglR 306 (459)
T COG1167 229 AVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKALDAPGRVIYLGSFSKTLAPGLR 306 (459)
T ss_pred EEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhhCCCCCEEEEeeehhhcccccc
Confidence 4 55666778999998864 69999999999999999998755532 2211111111 3445999999999964 5
Q ss_pred ccEEeeC
Q 019931 328 GGFIACR 334 (334)
Q Consensus 328 GG~i~~~ 334 (334)
-|||+++
T Consensus 307 lG~vv~p 313 (459)
T COG1167 307 LGYVVAP 313 (459)
T ss_pred eeeeeCC
Confidence 6998875
No 325
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=2e-13 Score=131.87 Aligned_cols=158 Identities=20% Similarity=0.088 Sum_probs=113.6
Q ss_pred HHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 152 HRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 152 ~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
..+|.+.+++++|. +++++++++++++..++.+++.+ ++|.|+...+.|..+...++.. |+
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~-------------g~~~vli~~P~y~~y~~~~~~~----G~ 121 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEP-------------GKDAILYCPPTYGMYSVSAETI----GV 121 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCC-------------CCCEEEEcCCCHHHHHHHHHHc----CC
Confidence 36899999999985 45777788889999998887654 1377887777877666666655 78
Q ss_pred EEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcc
Q 019931 230 EVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 230 ~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g 302 (334)
+++.++.+ |++++++.+. ++++|++.+++||+|.+.+.++|.++++.. +.++|+||+|....... .
T Consensus 122 ~~~~v~~~~~~~~d~~~l~~~~~----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~---s 194 (351)
T PRK01688 122 EIRTVPTLDNWQLDLPAIADNLD----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQA---S 194 (351)
T ss_pred EEEEeecCCCCCCCHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC---C
Confidence 88877642 6777777652 678999999999999999977777766542 68999999997532111 1
Q ss_pred cccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 303 VAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 303 ~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
........++ -|++.||||+||..| ||++++
T Consensus 195 ~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~ 228 (351)
T PRK01688 195 LAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN 228 (351)
T ss_pred hHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC
Confidence 1111111233 389999999999877 887653
No 326
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=3.3e-13 Score=130.40 Aligned_cols=157 Identities=18% Similarity=0.092 Sum_probs=112.9
Q ss_pred HHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 152 HRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 152 ~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
..+|++++|+++|. +.+++++++++++..++.+++.+ ++|.|++..+.+......++.. |+
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~-------------g~d~vlv~~P~y~~y~~~~~~~----g~ 124 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEP-------------GQDSIACFGPTYGMYAISAETF----NV 124 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCC-------------CCCeEEEcCCChHHHHHHHHHc----CC
Confidence 37799999999985 45777788889999999888764 1377888777776655444444 78
Q ss_pred EEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc-CCEEEEecCcccccccCCCccc
Q 019931 230 EVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY-GFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 230 ~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~-ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
+++.++.+ |++.+++ + +++++|++++++||+|.+.|.+++.++++.. +++||+||+|.... .. ...
T Consensus 125 ~v~~v~~~~~~~~~~~~l~~-~----~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~--~~-~s~ 196 (354)
T PRK04635 125 GVKALPLTADYQLPLDYIEQ-L----DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFC--PE-YSV 196 (354)
T ss_pred EEEEEecCCCCCCCHHHHHh-c----cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhc--cC-cch
Confidence 88887753 4555552 2 2688999999999999999999999998874 79999999997532 11 111
Q ss_pred ccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 304 AEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
.......+++ |++.||||+||..| ||++++
T Consensus 197 ~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~ 229 (354)
T PRK04635 197 ADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN 229 (354)
T ss_pred HHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC
Confidence 1111112333 78999999999877 887653
No 327
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=2.8e-12 Score=121.71 Aligned_cols=200 Identities=20% Similarity=0.205 Sum_probs=140.3
Q ss_pred eeEEEeecCc---cCCCCCCHHHHHHHHH---hcCCCCccccccCchHHHHHHHHHHHhHh----CCCcEEEeccHHHHH
Q 019931 109 KRLLLFSGND---YLGLSSHPTIAKAAAR---HGMGPRGSALICGYTNYHRLLESCLADLK----KKEDCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~---yLgl~~~p~v~~a~~~---~g~g~~~sr~~~G~~~~~~~LE~~La~~~----g~e~alv~~sG~~An 178 (334)
|.+|-....| |-.|.+.+...+|+.+ .|.+. +|....|.....+++.+.+-+-. ..+++++++++.+|+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N-~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN-GYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC-CcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 5777777754 5667778887777643 23332 33444454444444444432211 246788889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTM 251 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~ 251 (334)
..++.+|++| +.-|+..++.+.-...-+... +.+++.|+.. |++.+|.++.+
T Consensus 140 e~~i~~LA~p--------------~aNILlPrPGfp~Y~~~a~~~----~lEVR~ydlLPe~~weIDL~~veal~DE--- 198 (447)
T KOG0259|consen 140 ELAISSLANP--------------GANILLPRPGFPLYDTRAIYS----GLEVRYYDLLPEKDWEIDLDGVEALADE--- 198 (447)
T ss_pred HHHHHHhcCC--------------CCceecCCCCCchHHHhhhhc----CceeEeecccCcccceechHHHHHhhcc---
Confidence 9999999986 555888877654433333333 7888888742 89999999986
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC-CCCCccEEEecCcccccCC
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN-CERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~-~~~~~Div~~SlsKa~G~~ 327 (334)
+|.++++..++||.|.+.. |++|+++|+|+|+++|.||+|..-+||..-.-....|. ..| -|.+|++||.+=..
T Consensus 199 NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP--VitlggisKrW~VP 276 (447)
T KOG0259|consen 199 NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP--VITLGGISKRWIVP 276 (447)
T ss_pred CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc--eEeecccccccccC
Confidence 8999999999999998876 99999999999999999999999888743211111222 123 26789999998665
Q ss_pred c---cEEe
Q 019931 328 G---GFIA 332 (334)
Q Consensus 328 G---G~i~ 332 (334)
| |+++
T Consensus 277 GWRlGWi~ 284 (447)
T KOG0259|consen 277 GWRLGWIA 284 (447)
T ss_pred CceeeeEE
Confidence 5 7765
No 328
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.48 E-value=1.1e-12 Score=130.70 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=109.6
Q ss_pred ccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 145 ICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
..|......++++.+++++|.+ .++++++|++++.+++.++... ++|.|++....|.+....+..
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~-------------~g~~Vlv~~~~~~~~~~~~~~ 173 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT-------------KRKKVLVSGAVHPEYREVLKT 173 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc-------------CCCEEEEeCccCHHHHHHHHH
Confidence 3444455667778899999975 3567788888887877776421 267788888899887777654
Q ss_pred hhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe-cCccccccc
Q 019931 223 AERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLD-DAHGTFVCG 297 (334)
Q Consensus 223 s~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivD-eAh~~Gv~G 297 (334)
.....|.+++.++.+ |+++|++++++ ++++|++.++ |++|.+.|+++|.++|+++|++++++ +..+.|.+.
T Consensus 174 ~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~---~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~ 249 (447)
T PRK00451 174 YLKGQGIEVVEVPYEDGVTDLEALEAAVDD---DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGLLK 249 (447)
T ss_pred HHHhCCcEEEEecCCCCCCCHHHHHHhcCC---CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhccCC
Confidence 222237888888764 78888888864 7888888888 78999999999999999999999982 223333221
Q ss_pred CCCcccccccCCCCCccEEEe---cCccccc
Q 019931 298 KNGGGVAEQFNCERDVDICVG---TLSKAAG 325 (334)
Q Consensus 298 ~~G~g~~~~~~~~~~~Div~~---SlsKa~G 325 (334)
.. -..++|++++ +|||.+.
T Consensus 250 --------~~-~~~~~D~~~~s~~k~~~~~~ 271 (447)
T PRK00451 250 --------PP-GEYGADIVVGEGQPLGIPLS 271 (447)
T ss_pred --------Cc-ccCCCCEEEECCCcCCCCCC
Confidence 11 1245789888 5666643
No 329
>PRK08637 hypothetical protein; Provisional
Probab=99.48 E-value=2.7e-12 Score=125.63 Aligned_cols=192 Identities=13% Similarity=0.023 Sum_probs=122.2
Q ss_pred CCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC-C-----CcEEEeccHHHHHHHHHHHHhhhhhhccCCC
Q 019931 124 SHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK-K-----EDCLLCPTGFAANMAVIVAVGNIASLLAGDE 196 (334)
Q Consensus 124 ~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g-~-----e~alv~~sG~~An~~ai~al~~~~~~~~~~~ 196 (334)
..+.+++++++.. ....++....|...+.+.+.+.+.+..+ . +++++++++.+++..++.+++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~-------- 92 (388)
T PRK08637 21 YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQ-------- 92 (388)
T ss_pred hHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCC--------
Confidence 3455555555532 2223344456655555555555544322 1 34577788888998888888764
Q ss_pred ccCCCCCeEEEEcCCCchhhHHHHH-HhhhcCCcEEEEeeC--C----CHHHHHHHHhc-CCCCcEEEEEcCCCCCCCCc
Q 019931 197 KSFKDEKIAIFSDALNHASIIDGIR-IAERTKMVEVFVYKH--C----DMSHLKTLLSC-CTMRKKVVVTDSLFSMDGDF 268 (334)
Q Consensus 197 ~~~~~~gd~Vl~d~~~H~s~~~g~~-ls~~~~g~~v~~~~~--~----D~~~Le~~l~~-~~~~~~lVv~e~v~n~~G~~ 268 (334)
||.|++..+.+......+. .. |.+++.++. . |++++++.++. ..+.++++++.+++||+|.+
T Consensus 93 ------gd~Vlv~~P~y~~~~~~~~~~~----g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 93 ------GDTVLLPDHNWGNYKLTFNTRR----GAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred ------CCEEEEcCCCCccHHHHHHHhc----CCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence 7888888888777665433 34 778877764 2 68888888762 11356788899999999988
Q ss_pred cC---HHHHHHHHHH-----cCCEEEEecCcccccccCCCc-ccccc-cCCCCCc-cEEEecCcccccCCc---cEEee
Q 019931 269 AP---MVELVKLRRK-----YGFLLVLDDAHGTFVCGKNGG-GVAEQ-FNCERDV-DICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 269 ~p---L~~L~ela~k-----~ga~LivDeAh~~Gv~G~~G~-g~~~~-~~~~~~~-Div~~SlsKa~G~~G---G~i~~ 333 (334)
.+ +++|+++|++ |+++||+||+|...++..... .+... .+..+++ -|.++||||.|++.| ||++.
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 77 5667777765 999999999998655532111 11111 1222233 134469999998877 88763
No 330
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.45 E-value=4.5e-12 Score=125.87 Aligned_cols=192 Identities=16% Similarity=0.033 Sum_probs=131.8
Q ss_pred CCHHHHHHHHHhcC---CCCccccccCchHHHHHHHHHHHhHhCCC----cEEE--eccHHHHHHHHHHHHhhhh--hhc
Q 019931 124 SHPTIAKAAARHGM---GPRGSALICGYTNYHRLLESCLADLKKKE----DCLL--CPTGFAANMAVIVAVGNIA--SLL 192 (334)
Q Consensus 124 ~~p~v~~a~~~~g~---g~~~sr~~~G~~~~~~~LE~~La~~~g~e----~alv--~~sG~~An~~ai~al~~~~--~~~ 192 (334)
.+|.+.+++.++-. +...+ ........+++.+.+++++|.+ .+.+ +++|++||..++.+..... ...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s--~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDE--YPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCccc--CccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 36778776654321 22111 1222356677778888899865 3433 5899999999987654220 000
Q ss_pred cCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---C---CHHHHHHHHhcCCCCcEEEEEcCCCCCCC
Q 019931 193 AGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---C---DMSHLKTLLSCCTMRKKVVVTDSLFSMDG 266 (334)
Q Consensus 193 ~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---~---D~~~Le~~l~~~~~~~~lVv~e~v~n~~G 266 (334)
..+ .. .....|++....|.|+...++.. +.+++.++. . |+++|+++|++ ++.+|++..+++.+|
T Consensus 131 ~~g-~~--~~~~~ii~s~~~H~sv~ka~~~l----g~~v~~i~~d~~~~~vd~~~L~~~i~~---~t~lV~~t~g~t~tG 200 (431)
T TIGR01788 131 AAG-KP--TDKPNLVMGSNVQVCWEKFARYF----DVELREVPMDPGRYVIDPEQVVEAVDE---NTIGVVCILGTTYTG 200 (431)
T ss_pred hcC-CC--CCCcEEEEcCcchHHHHHHHHHc----CceeEEEecCCCceeeCHHHHHHHHhh---CCeEEEEEeCCCCCc
Confidence 000 00 01246888899999998888766 666665553 1 78899999875 688999999999999
Q ss_pred CccCHHHHHHHHHHc------CCEEEEecCccccc----ccCCCcccccccCCCCCccEEEecCcccc-cCCc-cEEe
Q 019931 267 DFAPMVELVKLRRKY------GFLLVLDDAHGTFV----CGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQG-GFIA 332 (334)
Q Consensus 267 ~~~pL~~L~ela~k~------ga~LivDeAh~~Gv----~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~G-G~i~ 332 (334)
.+.|+++|.++|+++ |+++++|.||+.+. +++.. ..+. .+++|.+..|.+|-+ |+.| |++.
T Consensus 201 ~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~----~~~~-~~~~DSis~s~HK~~~~P~g~G~l~ 273 (431)
T TIGR01788 201 EYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE----WDFR-LPRVKSINVSGHKYGLVYPGVGWVI 273 (431)
T ss_pred ccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch----hhcC-CCCceEEEECchhccCCCCCcEEEE
Confidence 999999999999999 99999999999654 22211 1222 357899999999966 8876 6654
No 331
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.44 E-value=2.2e-12 Score=127.57 Aligned_cols=166 Identities=14% Similarity=0.070 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHH-HHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDG-IRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g-~~ls~~~~ 227 (334)
++...+||+++++++|.++++.++||++|+..++...++ +||+| ....|.....+ +...
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~--------------pGd~V--p~n~~f~Tt~ahI~~~---- 136 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIK--------------PGQYV--PGNMYFTTTRYHQELN---- 136 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCC--------------CcCEE--CCccchHhhHHHHHhC----
Confidence 455689999999999999999999999999986543333 37765 44455555444 4333
Q ss_pred CcEEEEe--------------eC-CCHHHHHHHHhcCC-CCcEEEEEcCCCCCC-CCcc---CHHHHHHHHHHcCCEEEE
Q 019931 228 MVEVFVY--------------KH-CDMSHLKTLLSCCT-MRKKVVVTDSLFSMD-GDFA---PMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 228 g~~v~~~--------------~~-~D~~~Le~~l~~~~-~~~~lVv~e~v~n~~-G~~~---pL~~L~ela~k~ga~Liv 287 (334)
|+.++-. .. .|++.|+++|++.. +++.+|..+-+.|.. |.+. ++++|.++|++||+.||.
T Consensus 137 Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~ 216 (460)
T PRK13237 137 GGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFF 216 (460)
T ss_pred CcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEE
Confidence 5543322 11 28999999998632 234444444444554 6554 589999999999999999
Q ss_pred ecCcccc---cc-----cCCCcccccc-cCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 288 DDAHGTF---VC-----GKNGGGVAEQ-FNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 288 DeAh~~G---v~-----G~~G~g~~~~-~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
|.||.+| ++ |..+....+. ..+....|+++.|++|.++. .||+|+.+
T Consensus 217 DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~ 273 (460)
T PRK13237 217 DATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMN 273 (460)
T ss_pred ECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEEC
Confidence 9999987 22 1112211100 00113468999999999976 59999863
No 332
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.41 E-value=3.7e-12 Score=125.66 Aligned_cols=166 Identities=14% Similarity=0.046 Sum_probs=113.4
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHH-HHHhhhc
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDG-IRIAERT 226 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g-~~ls~~~ 226 (334)
.++...+||+++++++|.++++.++||++|...+..+.++ +||+| ..+.|.....+ +...
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~--------------pGDeV--psn~~f~Tt~ahIe~~--- 129 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIK--------------PGDYV--PGNMYFTTTRYHQEKN--- 129 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCC--------------CcCEE--CCceeHHHHHHHHHhC---
Confidence 3455689999999999999999999999996655444443 37877 34566555444 4444
Q ss_pred CCcEEEEeeC---------------CCHHHHHHHHhcCC-CCcEEEEEcCCCCCC-CCc---cCHHHHHHHHHHcCCEEE
Q 019931 227 KMVEVFVYKH---------------CDMSHLKTLLSCCT-MRKKVVVTDSLFSMD-GDF---APMVELVKLRRKYGFLLV 286 (334)
Q Consensus 227 ~g~~v~~~~~---------------~D~~~Le~~l~~~~-~~~~lVv~e~v~n~~-G~~---~pL~~L~ela~k~ga~Li 286 (334)
|+.++-+.. .|+++||++|++.. .++++|.++.+.|.. |.+ .++++|.++|++||+.|+
T Consensus 130 -Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 130 -GATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred -CeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 554444411 28999999998532 244566666566654 777 447999999999999999
Q ss_pred EecCccccc--c------cCCCcccccc-cCCCCCccEEEecCcccccC-CccEEee
Q 019931 287 LDDAHGTFV--C------GKNGGGVAEQ-FNCERDVDICVGTLSKAAGC-QGGFIAC 333 (334)
Q Consensus 287 vDeAh~~Gv--~------G~~G~g~~~~-~~~~~~~Div~~SlsKa~G~-~GG~i~~ 333 (334)
.|.||.++- + |..+....+. -.+...+|.++.|+.|.++. .||+|+.
T Consensus 209 ~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~ 265 (450)
T TIGR02618 209 YDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCM 265 (450)
T ss_pred EEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEe
Confidence 999999841 1 1112222110 00123578999999999976 6999983
No 333
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.40 E-value=3.2e-12 Score=132.55 Aligned_cols=155 Identities=14% Similarity=0.073 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHH-HHHhhhc
Q 019931 149 TNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDG-IRIAERT 226 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g-~~ls~~~ 226 (334)
.-...+.|+.+|+.+|+++..+. ++.+.+|.+++.+++.+ ||.|++++.+|.|+.++ +.++
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~--------------Gd~VLvdRN~HKSv~hgaLiLs--- 235 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTP--------------GDLVLFDRNNHKSNHHGALIQA--- 235 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCC--------------CCEEEeecccHHHHHHHHHHHc---
Confidence 34568999999999999998766 55567999999998875 89999999999999997 8888
Q ss_pred CCcEEEEeeCC----------C-----HHHHHHHHhcCCC-------CcE-EEEEcCCCCCCCCccCHHHHHHH-HHHcC
Q 019931 227 KMVEVFVYKHC----------D-----MSHLKTLLSCCTM-------RKK-VVVTDSLFSMDGDFAPMVELVKL-RRKYG 282 (334)
Q Consensus 227 ~g~~v~~~~~~----------D-----~~~Le~~l~~~~~-------~~~-lVv~e~v~n~~G~~~pL~~L~el-a~k~g 282 (334)
|+.++++... + .+.++++|++.++ +.+ +|++.+.| +|.+.++++|+++ +++++
T Consensus 236 -Ga~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~ydi~~I~~~~~h~~~ 312 (720)
T PRK13578 236 -GATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYNARQVVDKIGHLCD 312 (720)
T ss_pred -CCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeecHHHHHHHhhccCC
Confidence 8887775321 3 4558988887521 134 45555555 8999999999998 78888
Q ss_pred CEEEEecCcccccccCCC--cccccccCCCCCcc----EEEecCcccccC
Q 019931 283 FLLVLDDAHGTFVCGKNG--GGVAEQFNCERDVD----ICVGTLSKAAGC 326 (334)
Q Consensus 283 a~LivDeAh~~Gv~G~~G--~g~~~~~~~~~~~D----iv~~SlsKa~G~ 326 (334)
.|++||||+.- +.-.. +++.. ..+..++| +++-|.+|.+++
T Consensus 313 -~llvDEAhgah-~~F~p~~~~~p~-~al~~GaD~p~i~v~QStHKtL~a 359 (720)
T PRK13578 313 -YILFDSAWVGY-EQFIPMMADCSP-LLLELNENDPGIFVTQSVHKQQAG 359 (720)
T ss_pred -cEEEeCcchhh-hccCcccccCCh-hhhhcCCCCCCeEEEEChhhcchh
Confidence 99999999853 22111 11111 11334566 999999999976
No 334
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.40 E-value=4.7e-12 Score=131.25 Aligned_cols=153 Identities=13% Similarity=0.092 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
-...+.|+.+|+.+|++++.+..+| +.+|.+++.+++.+ ||.|++|+.+|.|+.+++.++ |
T Consensus 195 G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~--------------Gd~VLvdRN~HKSv~haLils----g 256 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPA--------------GSTVLIDRNCHKSLTHLMMMS----D 256 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCC--------------CCEEEeecccHHHHHHHHHHc----C
Confidence 4568999999999999998777555 77999999988865 899999999999999999998 8
Q ss_pred cEEEEeeCC---------------CHHHHHHHHhcCCCCc---EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 229 VEVFVYKHC---------------DMSHLKTLLSCCTMRK---KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 229 ~~v~~~~~~---------------D~~~Le~~l~~~~~~~---~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
+.++++... +.+.+++.+++.+..+ .+|++.+.| +|.+.++++|+++|+.++ |++|||
T Consensus 257 a~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd~~~I~~~~~~~~--ilvDEA 332 (714)
T PRK15400 257 VTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYNTDFIKKTLDVKS--IHFDSA 332 (714)
T ss_pred CeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecCHHHHHHHhCCCC--EEEEcc
Confidence 888776421 3789999998764212 466776655 899999999999999887 689999
Q ss_pred cccccccCCCcccccccCCCCCc---c--EEEecCcccccC
Q 019931 291 HGTFVCGKNGGGVAEQFNCERDV---D--ICVGTLSKAAGC 326 (334)
Q Consensus 291 h~~Gv~G~~G~g~~~~~~~~~~~---D--iv~~SlsKa~G~ 326 (334)
|+.- +.-.. .+....++..++ | +++-|.+|.+++
T Consensus 333 wgah-~~F~p-~~~~~sam~~ga~~~~~i~vtQStHKtL~a 371 (714)
T PRK15400 333 WVPY-TNFSP-IYEGKCGMSGGRVEGKVIYETQSTHKLLAA 371 (714)
T ss_pred chhh-hccCc-ccCCcChhhcCCCCCCceEEEEchhhcccc
Confidence 9853 21111 111122222222 4 999999999976
No 335
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.38 E-value=1.8e-11 Score=120.69 Aligned_cols=208 Identities=14% Similarity=0.086 Sum_probs=117.2
Q ss_pred eeEEEeecCccCCCCCC-HHHHHHHHHhcC-CC-----CccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSH-PTIAKAAARHGM-GP-----RGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~-p~v~~a~~~~g~-g~-----~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~A 177 (334)
...+||+.++..-+..+ +.+++++++... .. ..+....|...+.+.+.+.+.+..| .+++++++++.+|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 34689987764322222 244555554321 11 1233334544444455554444434 2467777888889
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEE-cCCCchhhHHHHHHhh--hcCCcEEEEeeC------CCHHHHHHHHhc
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFS-DALNHASIIDGIRIAE--RTKMVEVFVYKH------CDMSHLKTLLSC 248 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~-d~~~H~s~~~g~~ls~--~~~g~~v~~~~~------~D~~~Le~~l~~ 248 (334)
+..++.+++.++ ..++||.|++ ..+.+......+.... ...+..+..++. .|++.|+ +.
T Consensus 110 l~~~~~~l~~~~---------~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~- 177 (416)
T PRK09440 110 FFYLFNLFAGRR---------ADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID- 177 (416)
T ss_pred HHHHHHHHhccc---------cCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-
Confidence 988888877531 0013666776 5666555443222110 000122222221 2566665 22
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
.++++|++.+++||+|.+.+ +++|+++|++|++++|+||+|....-......... ...++ -|+++||||. +
T Consensus 178 --~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~--~~~~~-vI~~~SfSK~-~ 251 (416)
T PRK09440 178 --EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATP--LWNPN-IILCMSLSKL-G 251 (416)
T ss_pred --CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCc--cccCC-eEEEeccccc-C
Confidence 36789999999999999988 66788899999999999999974211100000000 01122 4889999996 6
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 252 ~pGlRiG~~i~~ 263 (416)
T PRK09440 252 LPGVRCGIVIAD 263 (416)
T ss_pred CCcceEEEEeCC
Confidence 666 888764
No 336
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.35 E-value=2.1e-11 Score=129.49 Aligned_cols=164 Identities=17% Similarity=0.171 Sum_probs=122.3
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA 223 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls 223 (334)
..|+.....++++.|++++|.+.+-++ ++|++++.+.+.++...-. ..++ .+.++|++....|++....+...
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~--~rge----~~R~~vlip~saHgtnPasa~~~ 598 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHE--SRGE----NHRNICLIPVSAHGTNPASAAMA 598 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHH--hcCC----CCCCEEEEEccccCcCHHHHHHC
Confidence 456778889999999999999876555 7778888876766543100 0000 12467888888998877776666
Q ss_pred hhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC-HHHHHHHHHHcCCEEEEecCccccccc
Q 019931 224 ERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP-MVELVKLRRKYGFLLVLDDAHGTFVCG 297 (334)
Q Consensus 224 ~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p-L~~L~ela~k~ga~LivDeAh~~Gv~G 297 (334)
|.+++.++.+ |+++|++++++.+.++++|++..+++ .|.+.| +++|.++|+++|+++++|.|+..+..+
T Consensus 599 ----G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 599 ----GMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred ----CCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 7888888753 89999999986445788998888888 688877 999999999999999999999754332
Q ss_pred CCCcccccccCCCCCccEEEecCcccccC
Q 019931 298 KNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 298 ~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
.. .. -.-++||+++|.+|+|+.
T Consensus 674 l~------~P-g~~GaDi~~~s~HKtf~~ 695 (939)
T TIGR00461 674 LT------SP-GDLGADVCHLNLHKTFCI 695 (939)
T ss_pred CC------Cc-cccCCCEEEecCCccCCC
Confidence 11 11 124689999999998863
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.34 E-value=2.2e-11 Score=128.84 Aligned_cols=165 Identities=15% Similarity=0.123 Sum_probs=123.4
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEec-cHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLCP-TGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA 223 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~~-sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls 223 (334)
..|+.....+||+.+++++|.+.+-+.+ +|+++++++++++..- .-.+|+ ...++|++....|.+....+...
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~y--h~~~Ge----~~r~~vLIp~saHgtNpasa~~~ 611 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRY--HRSRGQ----SQRDICLIPSSAHGTNPASAQMA 611 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHH--HHhcCC----CCCCEEEecccccccCHHHHHHC
Confidence 5677788899999999999999987774 9999998888876531 000110 12467888888887765444444
Q ss_pred hhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 224 ERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 224 ~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
|.+++.++.+ |+++|++++++.+.++++|++..+++..+...|+++|+++|+++|+++++|.||..+..+-
T Consensus 612 ----GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l 687 (954)
T PRK12566 612 ----GMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL 687 (954)
T ss_pred ----CCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC
Confidence 7888888763 8999999998555577888888877766556679999999999999999999998653321
Q ss_pred CCcccccccCCCCCccEEEecCcccccC
Q 019931 299 NGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 299 ~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
... -.-++||++++++|+|+.
T Consensus 688 ------~~P-g~~GADi~~~s~HKtf~~ 708 (954)
T PRK12566 688 ------ARP-ADIGADVSHMNLHKTFCI 708 (954)
T ss_pred ------CCh-hhcCCCEEEecCCcccCc
Confidence 001 124689999999999964
No 338
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.34 E-value=2.2e-11 Score=126.22 Aligned_cols=157 Identities=15% Similarity=0.076 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
-...+.|+.+|+.+|++++.+..+| +.+|.+++.+++.+ ||.|++|+.+|.|+.+++.++ |
T Consensus 195 G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~--------------Gd~VLvdRN~HKSv~~aLils----g 256 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPA--------------GSTLLIDRNCHKSLAHLLMMS----D 256 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCC--------------CCEEEeecccHHHHHHHHHHc----C
Confidence 4568899999999999998777555 77999999998875 899999999999999999998 8
Q ss_pred cEEEEeeCC----------C-----HHHHHHHHhcCCC--C-cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEE-EEec
Q 019931 229 VEVFVYKHC----------D-----MSHLKTLLSCCTM--R-KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLL-VLDD 289 (334)
Q Consensus 229 ~~v~~~~~~----------D-----~~~Le~~l~~~~~--~-~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~L-ivDe 289 (334)
+.++++... + .+.+++++++.+. + ..+|++.+.| +|.+.++++|.++| |+.+ ++||
T Consensus 257 a~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd~~~I~~~~---g~~~ilvDE 331 (713)
T PRK15399 257 VVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYNTDWIKQTL---DVPSIHFDS 331 (713)
T ss_pred CeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeCHHHHHHHh---CCCEEEEec
Confidence 888775421 3 3889999987642 1 3456666644 89999999999998 6666 6999
Q ss_pred CcccccccCCCcccccccCCC--CCccEE---EecCcccccC--CccEE
Q 019931 290 AHGTFVCGKNGGGVAEQFNCE--RDVDIC---VGTLSKAAGC--QGGFI 331 (334)
Q Consensus 290 Ah~~Gv~G~~G~g~~~~~~~~--~~~Div---~~SlsKa~G~--~GG~i 331 (334)
||+.- +.-.. .+.....+. +.+|.+ +-|.+|.+++ ++++|
T Consensus 332 Ahgah-~~F~p-~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~i 378 (713)
T PRK15399 332 AWVPY-THFHP-IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLI 378 (713)
T ss_pred cchhh-hhcCc-ccCCcChhhCCCCCCeeeeeeeehhccccccchheee
Confidence 99843 21111 011112221 234655 9999999986 34544
No 339
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.34 E-value=1.5e-11 Score=123.30 Aligned_cols=154 Identities=19% Similarity=0.163 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
-.+.+.|+..|+.+|+++..|. ++-+.||..++.+++.+ ||.|++|+.+|.|+.+++.++ |
T Consensus 70 G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~--------------GD~VLvdRN~HKSi~~glila----G 131 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTP--------------GDKVLVDRNCHKSIHHGLILA----G 131 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCC--------------CCEEEecCCccHHHHHHHHHc----C
Confidence 3458899999999999987666 55578999999998875 899999999999999999888 7
Q ss_pred cEEEEeeC-----------CCHHHHHHHHhcCCCC-cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 229 VEVFVYKH-----------CDMSHLKTLLSCCTMR-KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 229 ~~v~~~~~-----------~D~~~Le~~l~~~~~~-~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
+..++... -+.+.+++.+.+.+.. +.+|++.+.| +|.+.++++|++.++++++|+.+|++|..- +
T Consensus 132 a~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~~-~ 208 (557)
T COG1982 132 ATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPAH-F 208 (557)
T ss_pred CceEEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc--ceEeecHHHHHHHHhhcCceEEhhhcCccc-c
Confidence 87776542 2678888877765434 5567777766 899999999999999999999999999864 3
Q ss_pred cCCCcccccccCCCCCccEEEecCcccccC
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+..+.. . ...+...+|+++-|.+|.+++
T Consensus 209 ~~~~~l-~-~~~~~~~~~~~tqS~HK~l~a 236 (557)
T COG1982 209 DFSPML-P-ESALNGGADFVTQSTHKLLAA 236 (557)
T ss_pred cccccC-c-chhhhcCceEEEechhhhhhh
Confidence 322211 1 123335678999999999976
No 340
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.31 E-value=6.8e-11 Score=119.99 Aligned_cols=159 Identities=18% Similarity=0.189 Sum_probs=102.9
Q ss_pred EEEeccHHHHHHHHHHHHhhhhhhccCCC---cc-----------CCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEE
Q 019931 168 CLLCPTGFAANMAVIVAVGNIASLLAGDE---KS-----------FKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFV 233 (334)
Q Consensus 168 alv~~sG~~An~~ai~al~~~~~~~~~~~---~~-----------~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~ 233 (334)
.+++++|++||+.++.+.... .+++.. .. ...++.+|++....|.|+...+++...+ ..+++.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~--~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg-~~~v~~ 238 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNR--LLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIG-RDNLIA 238 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHH--hccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCC-cccEEE
Confidence 577899999999998764432 111100 00 0013568899999999998887776211 115555
Q ss_pred eeCC-----CHHHHHHHHhcCC-CCcEE--EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc-cCCCcccc
Q 019931 234 YKHC-----DMSHLKTLLSCCT-MRKKV--VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC-GKNGGGVA 304 (334)
Q Consensus 234 ~~~~-----D~~~Le~~l~~~~-~~~~l--Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~-G~~G~g~~ 304 (334)
++.+ |+++|++++++.. .+++. |+...-.+.+|.+.|+++|.++|+++|+|++||.||+.+.+ .+..+..
T Consensus 239 vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~- 317 (522)
T TIGR03799 239 IKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHL- 317 (522)
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHH-
Confidence 5532 8999999987431 23333 33334445789999999999999999999999999985432 1100100
Q ss_pred cccCCCCCccEEEecCcccc-cCCc-cEEe
Q 019931 305 EQFNCERDVDICVGTLSKAA-GCQG-GFIA 332 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~-G~~G-G~i~ 332 (334)
..++ .++|.++.+.+|.+ ++.| |++.
T Consensus 318 -l~gl-e~aDSit~d~HK~l~~P~g~G~ll 345 (522)
T TIGR03799 318 -LKGI-ERADSVTIDAHKQLYVPMGAGMVL 345 (522)
T ss_pred -hcCc-hhCCEEEEChhhcCCcCcccEEEE
Confidence 0121 35799999999955 5665 5553
No 341
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.1e-10 Score=111.23 Aligned_cols=178 Identities=20% Similarity=0.185 Sum_probs=125.7
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEE-EeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCL-LCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~al-v~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
.+|+|++|+.+--.|. -+.-+ ...+.++.+.|...++.+ .++ +..||+.+.++++..+..|
T Consensus 16 v~~~V~~am~~~~~~h-~s~~F---~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~p------------ 79 (383)
T COG0075 16 VPPRVLLAMARPMVGH-RSPDF---VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEP------------ 79 (383)
T ss_pred CCHHHHHHhcCCCCCC-CCHHH---HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCC------------
Confidence 4788888876544431 12222 356788888999999976 454 4489999999999998876
Q ss_pred CCCeEEE-EcCCCchh-hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIF-SDALNHAS-IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl-~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|+ +....++- ..+.+... ++++..+.. -|++++++.|++.+ +.++|.+.+.=..+|...|+++
T Consensus 80 --gdkVLv~~nG~FG~R~~~ia~~~----g~~v~~~~~~wg~~v~p~~v~~~L~~~~-~~~~V~~vH~ETSTGvlnpl~~ 152 (383)
T COG0075 80 --GDKVLVVVNGKFGERFAEIAERY----GAEVVVLEVEWGEAVDPEEVEEALDKDP-DIKAVAVVHNETSTGVLNPLKE 152 (383)
T ss_pred --CCeEEEEeCChHHHHHHHHHHHh----CCceEEEeCCCCCCCCHHHHHHHHhcCC-CccEEEEEeccCcccccCcHHH
Confidence 44444 44333333 33333333 677777654 39999999998543 5667766666667899999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccC-Cc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
|.++|++||+++|||.+-++|-. . +.+ ..++|++++.--|++++ .| |+|+.
T Consensus 153 I~~~~k~~g~l~iVDaVsS~Gg~-----~----~~vd~wgiDv~itgSQK~l~~PPGla~v~~ 206 (383)
T COG0075 153 IAKAAKEHGALLIVDAVSSLGGE-----P----LKVDEWGIDVAITGSQKALGAPPGLAFVAV 206 (383)
T ss_pred HHHHHHHcCCEEEEEecccCCCc-----c----cchhhcCccEEEecCchhccCCCccceeEE
Confidence 99999999999999999887622 1 222 25689999999999976 45 55543
No 342
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.28 E-value=1.3e-10 Score=123.86 Aligned_cols=161 Identities=14% Similarity=0.051 Sum_probs=110.6
Q ss_pred hHHHHHHHHHHHhHhCCC--c-EEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 149 TNYHRLLESCLADLKKKE--D-CLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e--~-alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
....++.++++++++|++ . .++| +++++|+..++..+.- .+||.|++....|.++.....++.
T Consensus 77 ~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~-------------~~gd~Iv~t~~eH~svl~~~~~a~ 143 (805)
T PLN02724 77 SDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPW-------------SSESHFCYTLENHNSVLGIREYAL 143 (805)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCC-------------CCCCeEEEeeccccchHHHHHHHH
Confidence 456789999999999963 3 3455 5667777766655421 136778888889999886655543
Q ss_pred hcCCcEEEEeeCC---------------CHHHHHHHHh----cC---CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc-
Q 019931 225 RTKMVEVFVYKHC---------------DMSHLKTLLS----CC---TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY- 281 (334)
Q Consensus 225 ~~~g~~v~~~~~~---------------D~~~Le~~l~----~~---~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~- 281 (334)
+ .|++++.++.+ +.++|++.++ .. .+++++|++.+++|.+|.+.|++.|.++++..
T Consensus 144 ~-~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~ 222 (805)
T PLN02724 144 E-KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQH 222 (805)
T ss_pred H-cCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcc
Confidence 2 37777776543 1144655532 10 13568999999999999999999776555532
Q ss_pred -------CCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCccccc-CCc-cEEe
Q 019931 282 -------GFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAG-CQG-GFIA 332 (334)
Q Consensus 282 -------ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G-~~G-G~i~ 332 (334)
++++++|.||+.|..- .++. .++|+++.|++|-|| +.| |++.
T Consensus 223 ~~~~~~g~~~v~vDaaQ~~g~~p---------iDv~~~~~Dfl~~S~HK~~GgP~G~G~L~ 274 (805)
T PLN02724 223 SNFSKSGRWMVLLDAAKGCGTSP---------PDLSRYPADFVVVSFYKIFGYPTGLGALL 274 (805)
T ss_pred cccccCcceEEEeehhhhcCCCC---------CChhhcCCCEEEEecceeccCCCCceEEE
Confidence 3579999999987431 2232 367999999999998 555 5543
No 343
>PLN02263 serine decarboxylase
Probab=99.27 E-value=7.9e-10 Score=110.21 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=110.9
Q ss_pred HHHHHHHhHhCCC--c--EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCc
Q 019931 154 LLESCLADLKKKE--D--CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMV 229 (334)
Q Consensus 154 ~LE~~La~~~g~e--~--alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~ 229 (334)
++-+.+++++|.+ . ..++++|+++|+.++.+.... + ++.+|++....|.|+..++++. |.
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~---~---------~~~vvy~S~~aH~Sv~KAa~ll----gi 200 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREV---F---------PDGILYASRESHYSVFKAARMY----RM 200 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhh---c---------CCcEEEEcCCccHHHHHHHHhc----CC
Confidence 3444455556653 2 588899999999999765432 0 1347888889999999999988 67
Q ss_pred EEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCC-----EEEEecCcccccccCC
Q 019931 230 EVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGF-----LLVLDDAHGTFVCGKN 299 (334)
Q Consensus 230 ~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga-----~LivDeAh~~Gv~G~~ 299 (334)
+++.++.+ |+++|++.|.+...++.+|+...-.-+.|.+-|+++|.++|+++|+ ||.||.|++..++ +-
T Consensus 201 ~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l-Pf 279 (470)
T PLN02263 201 ECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMM-PF 279 (470)
T ss_pred cceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHh-hh
Confidence 77777643 8999999997643335555545445578999999999999999997 9999999985544 11
Q ss_pred CcccccccCCCCCccEEEecCcccccC
Q 019931 300 GGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 300 G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
-+. .+.+.....+|-+..+.+|.+++
T Consensus 280 ~~~-~~~~df~~~vDSIsvD~HK~l~~ 305 (470)
T PLN02263 280 VKR-APKVTFKKPIGSVSVSGHKFVGC 305 (470)
T ss_pred ccc-ccccCCCcCccEEEECCccccCC
Confidence 111 11122233488899999999976
No 344
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.27 E-value=1.3e-10 Score=125.03 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=118.0
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA 223 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls 223 (334)
..|+.....++++.|++++|.+.+-+. ++|++++.+.+.++... ...+++ .+.++|++....|.+....+...
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~--~~~~G~----~~r~~vlis~~aH~snp~sa~~~ 610 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAY--HESRGE----GHRDVCLIPSSAHGTNPASAVMA 610 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHH--hhccCC----CCCCEEEEEchhhhhhHHHHHHC
Confidence 345667788999999999999887666 56778886766544321 001111 11356888889999988777766
Q ss_pred hhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCC-ccCHHHHHHHHHHcCCEEEEecCccccccc
Q 019931 224 ERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGD-FAPMVELVKLRRKYGFLLVLDDAHGTFVCG 297 (334)
Q Consensus 224 ~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~-~~pL~~L~ela~k~ga~LivDeAh~~Gv~G 297 (334)
|.+++.++.+ |+++|++++++.+.++.+|++..+... |. ..|+++|+++|+++|+++++|.||..+.++
T Consensus 611 ----G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~ 685 (954)
T PRK05367 611 ----GMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVG 685 (954)
T ss_pred ----CCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccC
Confidence 8888887753 889999999764335667777666655 54 478999999999999999999999866443
Q ss_pred CCCcccccccCCCCCccEEEecCcccccC
Q 019931 298 KNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 298 ~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
-. . ...-++|+++++++|.|+.
T Consensus 686 l~------~-pg~~GADi~~~s~HK~f~~ 707 (954)
T PRK05367 686 LA------R-PGDIGADVSHLNLHKTFCI 707 (954)
T ss_pred CC------C-hhhcCCCEEEecCcccCCC
Confidence 21 1 1124589999999999864
No 345
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.26 E-value=4.3e-12 Score=117.15 Aligned_cols=205 Identities=17% Similarity=0.196 Sum_probs=139.6
Q ss_pred hhcccceeEEEeecCccCCCCCCHHHHHHH-HHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLSSHPTIAKAA-ARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~-~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
+.+++|.+|||..+|--.+=-.||+|.+|. ++...-++.+|+.. ..+.+-.++.++.+-+..-++|++||++||..+
T Consensus 41 mfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlh--d~lv~cA~~l~stlPeLsvc~F~NSGSEANDLA 118 (452)
T KOG1403|consen 41 MFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLH--DELVQCARTLTSTLPELSVCFFVNSGSEANDLA 118 (452)
T ss_pred eeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhH--HHHHHHHHHHhhcCCCceEEEEecCCchhhHHH
Confidence 567889999997777544434689888854 66677777778775 445444444444454555678889999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--CC-----cEEEEe-e------------C---CC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--KM-----VEVFVY-K------------H---CD 238 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--~g-----~~v~~~-~------------~---~D 238 (334)
++...+ .++..|+|..|..+|+-+..-+.++..+ .+ .+.+.+ | + .|
T Consensus 119 LRLAR~-----------ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~ 187 (452)
T KOG1403|consen 119 LRLARN-----------FTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDAD 187 (452)
T ss_pred HHHHHh-----------hcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCccc
Confidence 985332 3446899999999998766555555211 01 111111 1 1 12
Q ss_pred -----HHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc--
Q 019931 239 -----MSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-- 304 (334)
Q Consensus 239 -----~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-- 304 (334)
.+.++++++.. ..+..+++.|+..|-.|.+.| ++++++..+.+|-+.|.||+|.. +|+-|+.++
T Consensus 188 ~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvG--FGRvG~hyWaf 265 (452)
T KOG1403|consen 188 MGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVG--FGRVGSHYWAF 265 (452)
T ss_pred chhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhc--ccccchhhhhh
Confidence 23455555432 234567889999999998877 77888899999999999999984 788887654
Q ss_pred cccCCCCCccEEEecCcccccC
Q 019931 305 EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+.++..| ||+ |++|.+|-
T Consensus 266 q~y~fiP--DIV--tmgKpmGN 283 (452)
T KOG1403|consen 266 QTYNFIP--DIV--TMGKPMGN 283 (452)
T ss_pred hhhcccc--chh--eecccCCC
Confidence 4566667 455 89999974
No 346
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.22 E-value=9.8e-11 Score=115.00 Aligned_cols=201 Identities=12% Similarity=0.062 Sum_probs=130.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~ 188 (334)
.-+||+-|...-+.. .++.++|+.. |.- .+|.++...+||+.+++++|.|+++.+++|..|+..+++.++++
T Consensus 41 dV~IDLrSDTgT~ap-S~~m~aAM~~-GDD------~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~ 112 (467)
T TIGR02617 41 DVFIDLLTDSGTGAV-TQSMQAAMMR-GDE------AYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKK 112 (467)
T ss_pred CeEEECccCCCCCCC-CHHHHHHHHc-CCc------ccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhccc
Confidence 467898888755443 5666666654 321 34445667899999999999999999999999999999988873
Q ss_pred hhhccCCCccCCCCCeEEEEcCC----Cchh---hH-HHHHHhhhcCCcEEEEe--------------e-CCCHHHHHHH
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDAL----NHAS---II-DGIRIAERTKMVEVFVY--------------K-HCDMSHLKTL 245 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~----~H~s---~~-~g~~ls~~~~g~~v~~~--------------~-~~D~~~Le~~ 245 (334)
+|+.+.++.. .|.. .. ....++ |+.++.. + ..|+++|+++
T Consensus 113 -------------~g~e~g~~~~~~~v~hn~~fett~g~a~l~----G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~ 175 (467)
T TIGR02617 113 -------------REQEKGLDRSKMVAFSNYFFDTTQGHSQIN----GCTARNVYTKEAFDTGVRYDFKGNFDLEGLERG 175 (467)
T ss_pred -------------ccccccccccccccceEEEEecchHHHHHc----CceeecccchhhcccccCCCCCCCcCHHHHHHH
Confidence 2444443332 2222 11 223344 5544432 1 1389999999
Q ss_pred HhcCC-CCcEEEEEcCCCCC-CCCccC---HHHHHHHHHHcCCEEEEecCcccc-cc-------cCCCccccccc-CCCC
Q 019931 246 LSCCT-MRKKVVVTDSLFSM-DGDFAP---MVELVKLRRKYGFLLVLDDAHGTF-VC-------GKNGGGVAEQF-NCER 311 (334)
Q Consensus 246 l~~~~-~~~~lVv~e~v~n~-~G~~~p---L~~L~ela~k~ga~LivDeAh~~G-v~-------G~~G~g~~~~~-~~~~ 311 (334)
|++.. .+...+.+.-.+|. .|.+.| +.++.++|++||+.+++|.|.-+- .+ +..+....+.. .+..
T Consensus 176 I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~ 255 (467)
T TIGR02617 176 IEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK 255 (467)
T ss_pred HhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc
Confidence 98642 12333333333444 566666 667889999999999999987542 22 22233322210 1124
Q ss_pred CccEEEecCcccccC-CccEEeeC
Q 019931 312 DVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 312 ~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
.+|.++.|++|.+|+ .||+++++
T Consensus 256 ~aDsvt~slsKglgApvGg~Lag~ 279 (467)
T TIGR02617 256 YADMLAMSAKKDAMVPMGGLLCFK 279 (467)
T ss_pred cCCEEEEEcCCCCCCcccceEEec
Confidence 578999999999987 69999875
No 347
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.13 E-value=1.2e-09 Score=104.81 Aligned_cols=162 Identities=17% Similarity=0.165 Sum_probs=118.1
Q ss_pred HHHHHHHHhHhC----------CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 153 RLLESCLADLKK----------KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 153 ~~LE~~La~~~g----------~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
..+.+++|+|.. .++.++.++++.||.+....|+.| ||..++..++++..-..++.
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadp--------------gdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADP--------------GDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCC--------------CceeeecCCCCCccccccee
Confidence 456666666542 356888899999999999888876 88888888888776544432
Q ss_pred hhhcCCcEEEEeeCC-------CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEec
Q 019931 223 AERTKMVEVFVYKHC-------DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 223 s~~~~g~~v~~~~~~-------D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDe 289 (334)
..|++++++... +.++||+++++. ..+.+-|++.+|+||.|++.+ |..|.++|.++++.||+||
T Consensus 190 ---rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DE 266 (471)
T KOG0256|consen 190 ---RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDE 266 (471)
T ss_pred ---ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeeh
Confidence 238888887642 688999888754 235678888899999999887 6678888999999999999
Q ss_pred CcccccccCCCc-ccccccC-C--CCCccEEEecCcccccCCc---cEE
Q 019931 290 AHGTFVCGKNGG-GVAEQFN-C--ERDVDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 290 Ah~~Gv~G~~G~-g~~~~~~-~--~~~~Div~~SlsKa~G~~G---G~i 331 (334)
+++.-|++..+. .+++... . .++..=++-|+||=||..| |+|
T Consensus 267 Iya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGvi 315 (471)
T KOG0256|consen 267 IYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVI 315 (471)
T ss_pred hhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEE
Confidence 999988876432 2222111 1 2222245679999999887 555
No 348
>PLN02880 tyrosine decarboxylase
Probab=99.13 E-value=3e-09 Score=107.45 Aligned_cols=173 Identities=15% Similarity=0.101 Sum_probs=109.3
Q ss_pred HHHHHHHHhHhCCCc---------EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh
Q 019931 153 RLLESCLADLKKKED---------CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA 223 (334)
Q Consensus 153 ~~LE~~La~~~g~e~---------alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls 223 (334)
.++-+.+++++|.+. .+++++|++||+.++.+..... +-..+.. ..+.-+|++....|.|+..++++.
T Consensus 125 ~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~-~~~~g~~--~~~~~vv~~S~~aH~Sv~Kaa~~l 201 (490)
T PLN02880 125 MIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRV-LRKVGKN--ALEKLVVYASDQTHSALQKACQIA 201 (490)
T ss_pred HHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHH-HHHhccc--ccCCeEEEEcCCchHHHHHHHHHc
Confidence 344445555666543 5788999999999987644321 0000000 002346777788899999999887
Q ss_pred hhcCCcEEEEeeC-------CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccc
Q 019931 224 ERTKMVEVFVYKH-------CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 224 ~~~~g~~v~~~~~-------~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~ 293 (334)
..+ ...++.++. .|+++|++.|++.. ..+.+|+...-.-.+|.+-|+++|.++|++||+|++||.||+.
T Consensus 202 Glg-~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg 280 (490)
T PLN02880 202 GIH-PENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAG 280 (490)
T ss_pred CCC-HHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHH
Confidence 211 012333332 38999999997531 1244555444445679999999999999999999999999997
Q ss_pred cccc-CCCcccccccCCCCCccEEEecCcccccC-Cc-cEEe
Q 019931 294 FVCG-KNGGGVAEQFNCERDVDICVGTLSKAAGC-QG-GFIA 332 (334)
Q Consensus 294 Gv~G-~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~G-G~i~ 332 (334)
+++- +..+.. ..++ ..+|.++..++|-++. .| |++.
T Consensus 281 ~~~~~~~~~~~--l~gi-e~aDSit~d~HKwl~~P~~~g~ll 319 (490)
T PLN02880 281 SACICPEYRHY--IDGV-EEADSFNMNAHKWFLTNFDCSLLW 319 (490)
T ss_pred HHHhCHHHHHH--hcCc-hhcCEEEECchhhcCCCccEEEEE
Confidence 6441 110000 1122 3579999999999965 33 4443
No 349
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.10 E-value=2.6e-09 Score=104.34 Aligned_cols=169 Identities=20% Similarity=0.147 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHh----HhCCC---------cEEEeccHHHHHHHHHHHHhhhhh--hccCCCccCCCCCeEEEEcCCCc
Q 019931 149 TNYHRLLESCLAD----LKKKE---------DCLLCPTGFAANMAVIVAVGNIAS--LLAGDEKSFKDEKIAIFSDALNH 213 (334)
Q Consensus 149 ~~~~~~LE~~La~----~~g~e---------~alv~~sG~~An~~ai~al~~~~~--~~~~~~~~~~~~gd~Vl~d~~~H 213 (334)
.+...++|+++.+ ++|.+ ..+++++|++||+.++.+...... ....+.. ..+.-+|++....|
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~--~~~~~~i~~s~~aH 151 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE--EIPKPVIYVSEQAH 151 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT--HCSSEEEEEETTS-
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc--cccccccccccccc
Confidence 3555666665555 55655 258889999999999976543210 0000000 01234677888899
Q ss_pred hhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC--CCcE-EEEEcCCCCCCCCccCHHHHHHHHHHcCCEE
Q 019931 214 ASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT--MRKK-VVVTDSLFSMDGDFAPMVELVKLRRKYGFLL 285 (334)
Q Consensus 214 ~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~--~~~~-lVv~e~v~n~~G~~~pL~~L~ela~k~ga~L 285 (334)
.|+..++.+. |..++.++.+ |+++|+++|++.. ..+. +|+...-...+|.+-|+++|+++|+++++||
T Consensus 152 ~S~~Kaa~~l----Glg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wl 227 (373)
T PF00282_consen 152 YSIEKAARIL----GLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWL 227 (373)
T ss_dssp THHHHHHHHT----TSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EE
T ss_pred cHHHHhccee----eeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceee
Confidence 9999999988 6667777643 8899999987642 1222 4544444556899999999999999999999
Q ss_pred EEecCccccc-ccCCCcccccccCCCCCccEEEecCcccccC
Q 019931 286 VLDDAHGTFV-CGKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 286 ivDeAh~~Gv-~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
.||.|++..+ +-+.-+.. ..++ +.+|-+..+++|.++.
T Consensus 228 HVDaA~gg~~~~~~~~~~~--~~gi-~~adSit~d~HK~l~~ 266 (373)
T PF00282_consen 228 HVDAAYGGSALLSPEYRHL--LFGI-ERADSITIDPHKWLGV 266 (373)
T ss_dssp EEEETTGGGGGGHCTTGGG--GTTG-GGESEEEEETTTTTS-
T ss_pred eeccccccccccccccccc--cccc-ccccccccchhhhhcC
Confidence 9999998533 22322222 1233 5678889999999986
No 350
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.10 E-value=9.1e-10 Score=107.66 Aligned_cols=175 Identities=13% Similarity=0.089 Sum_probs=115.7
Q ss_pred CCHH-HHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEEec-cHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 124 SHPT-IAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCP-TGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 124 ~~p~-v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~-sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
-+|+ |++++.+.-.+.. +|-. -.....++.++.|+++++.+ .+++++ ||+.++..++..+..+
T Consensus 23 ~~~~~v~~a~~~~~~~~~-hr~~-~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~---------- 90 (378)
T PRK03080 23 KRPGWQLEALADALLGRS-HRQK-PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGA---------- 90 (378)
T ss_pred CChHHHHHHHHhhhcccC-cCCH-HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCC----------
Confidence 3677 8888876543311 1111 12466789999999999963 466665 8999999999887642
Q ss_pred CCCCCeEEEEcCCCchhhHHHHHHhhhcCCc-EEEEeeCC--CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHH
Q 019931 199 FKDEKIAIFSDALNHASIIDGIRIAERTKMV-EVFVYKHC--DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELV 275 (334)
Q Consensus 199 ~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~-~v~~~~~~--D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ 275 (334)
+++.|+.. ..|.+-+... +.+ ..+. +++.++.. ..-++++ ++ .+++|.+.++.+.+|.+.|+++|.
T Consensus 91 ---~~~~vi~~-g~f~~~~~~~-~~~-~~g~~~v~~~~~~~g~~~d~~~-i~----~~~~V~~~h~~t~tG~~~pi~~I~ 159 (378)
T PRK03080 91 ---RRVDHLAW-ESFGSKWATD-VVK-QLKLEDPRVLEADYGSLPDLSA-VD----FDRDVVFTWNGTTTGVRVPVARWI 159 (378)
T ss_pred ---CcceEEEe-CHHHHHHHHH-HHh-hcCCCCceEeccCCCCCCCHhh-cC----CCCCEEEEecCCccceeccchhhc
Confidence 24556654 5666633221 111 1255 66655532 1112333 32 245688889999999999999999
Q ss_pred HHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-Cc-cEEee
Q 019931 276 KLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 276 ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
+ +++|+++++|.+|++|.. .+.+. ++|++++|.+|.|++ .| |++..
T Consensus 160 ~--~~~g~~~vVDa~qs~G~~---------pidv~-~iD~~~~s~~K~l~~P~G~g~l~v 207 (378)
T PRK03080 160 G--ADREGLTICDATSAAFAL---------PLDWS-KLDVYTFSWQKVLGGEGGHGMAIL 207 (378)
T ss_pred c--ccCCCeEEEecccccccC---------CCCHH-HCcEEEEehhhhCCCCCceEEEEE
Confidence 9 889999999999998753 12333 379999999999965 66 66543
No 351
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.09 E-value=5.9e-10 Score=108.03 Aligned_cols=176 Identities=14% Similarity=0.048 Sum_probs=111.3
Q ss_pred CCHHHHHHHHHhc-----CCCCcccccc---CchHHHHHHHHHHHhHhCC--C-cEEEecc-HHHHHHHHHHHHhhhhhh
Q 019931 124 SHPTIAKAAARHG-----MGPRGSALIC---GYTNYHRLLESCLADLKKK--E-DCLLCPT-GFAANMAVIVAVGNIASL 191 (334)
Q Consensus 124 ~~p~v~~a~~~~g-----~g~~~sr~~~---G~~~~~~~LE~~La~~~g~--e-~alv~~s-G~~An~~ai~al~~~~~~ 191 (334)
.++.|++|+.++- .|.+.+.... -.....++.+++++++++. + .++++++ |++|+..++..+..++
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~-- 87 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDK-- 87 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCC--
Confidence 4788999886542 2222222221 1126678999999999995 2 3566644 9999999998876421
Q ss_pred ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHH-HHHhcCCCCcEEEEEcCCCCC
Q 019931 192 LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLK-TLLSCCTMRKKVVVTDSLFSM 264 (334)
Q Consensus 192 ~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le-~~l~~~~~~~~lVv~e~v~n~ 264 (334)
+++++|+.....|.+ ..++++ .+.+++.++.. ++.+++ ..+ .+++++|.+.+..+.
T Consensus 88 ---------~~~~~i~~g~~~~~~----~~~a~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~lV~~~h~~t~ 150 (355)
T cd00611 88 ---------GTADYVVTGAWSAKA----AKEAKR-YGGVVVIVAAKEEGKYTKIPDVETWDL---APDAAYVHYCSNETI 150 (355)
T ss_pred ---------CeEEEEECCHHHHHH----HHHHHh-cCCCcEEEecccccCCCCCCCHhhcCC---CCCCCEEEEeCCccc
Confidence 247777764444433 223222 25666666542 322222 222 247899999999999
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEee
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
+|...+ ++++.||++++||.+|++|.. ..++. ..|+.+.|-.|.||+.| |++..
T Consensus 151 tG~~~~-----~i~~~~g~~~~VDa~qs~g~~---------~idv~-~~~~~~ss~~K~lGP~G~g~l~~ 205 (355)
T cd00611 151 HGVEFD-----EVPDTGGVPLVADMSSNILSR---------PIDVS-KFGVIYAGAQKNLGPAGVTVVIV 205 (355)
T ss_pred ccEEcc-----eecccCCCeEEEEccccccCC---------CCCHH-HhCEEEeecccccCCCceEEEEE
Confidence 998732 455669999999999998743 12222 23566666899999987 66654
No 352
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.07 E-value=8.1e-09 Score=103.32 Aligned_cols=172 Identities=23% Similarity=0.219 Sum_probs=111.6
Q ss_pred HHHHHHHH----HhHhCC-Cc--EEEeccHHHHHHHHHHHHhhhhhh--ccCCCccCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 152 HRLLESCL----ADLKKK-ED--CLLCPTGFAANMAVIVAVGNIASL--LAGDEKSFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 152 ~~~LE~~L----a~~~g~-e~--alv~~sG~~An~~ai~al~~~~~~--~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
..++|+++ +++++. +. ..++++|++||+.++.+......- ......+. +.-.|++....|.|....+++
T Consensus 99 a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~--~~P~ii~s~~aH~s~~Kaa~~ 176 (460)
T COG0076 99 AAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPG--GKPNIVCSETAHFSFEKAARY 176 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccC--CCCeEEecCcchhHHHHHHHH
Confidence 34455554 455665 33 478899999999999876554210 00000000 012688888999999999988
Q ss_pred hhhcCCcEEEEee----C--CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 223 AERTKMVEVFVYK----H--CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 223 s~~~~g~~v~~~~----~--~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
. |..+..++ + -|+++|++++.+..-.. +|+...-+-++|.+-|+++|.++|++|+++|+||.|.+..++
T Consensus 177 l----G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~ 251 (460)
T COG0076 177 L----GLGLRRVPTVPTDYRIDVDALEEAIDENTIGG-VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLL 251 (460)
T ss_pred h----CCCceeEEeccCccccCHHHHHHHHHhhccCc-eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceee
Confidence 7 44333322 2 38999999998743111 255555555789999999999999999999999999986544
Q ss_pred c-CCCcccccccCCCCCccEEEecCcccccC-Cc-cEEe
Q 019931 297 G-KNGGGVAEQFNCERDVDICVGTLSKAAGC-QG-GFIA 332 (334)
Q Consensus 297 G-~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~G-G~i~ 332 (334)
- ....+. ..+++ +.+|-++.+++|.+.. .| |+++
T Consensus 252 pf~~~~~~-~~f~l-~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 252 PFLEPDGR-WDFGL-EGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred cccCccch-hhcCC-CCceEEEECcccccCCCCCceEEE
Confidence 1 111111 01333 5688999999999854 33 5543
No 353
>PLN02590 probable tyrosine decarboxylase
Probab=99.06 E-value=1.6e-08 Score=102.86 Aligned_cols=170 Identities=18% Similarity=0.129 Sum_probs=108.8
Q ss_pred HHHHHHHH----HHHhHhCCCc---------EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhh
Q 019931 150 NYHRLLES----CLADLKKKED---------CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASI 216 (334)
Q Consensus 150 ~~~~~LE~----~La~~~g~e~---------alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~ 216 (334)
+...++|+ .|++++|.+. .+++++|++||+.++.+..... +..... ...+.-+|++....|.|+
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~--~~~~g~-~~~~~~vvy~S~~aH~Sv 242 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRI--LKKVGK-TLLPQLVVYGSDQTHSSF 242 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHH--Hhhhcc-cCCCCEEEEecCCchHHH
Confidence 34444555 4555566442 5788999999999887643321 100000 001234677888899999
Q ss_pred HHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 217 IDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 217 ~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
..++++.... ..+++.++. .|+++|++.|++.. ..+.+|+...-.-.+|.+-||++|.++|++||+||+
T Consensus 243 ~KAa~ilGlg-~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlH 321 (539)
T PLN02590 243 RKACLIGGIH-EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLH 321 (539)
T ss_pred HHHHHHcCCC-cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEE
Confidence 9999887321 113444442 38999999997532 123444444333457999999999999999999999
Q ss_pred EecCcccccc-cCCCcccccccCCCCCccEEEecCcccccC
Q 019931 287 LDDAHGTFVC-GKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 287 vDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
||.|++..++ -+..+.. ..|+ +.+|-+...++|.+..
T Consensus 322 VDaA~GG~al~~~~~r~~--~~Gi-e~ADSit~D~HK~l~~ 359 (539)
T PLN02590 322 VDAAYAGNACICPEYRKF--IDGI-ENADSFNMNAHKWLFA 359 (539)
T ss_pred EecchhhhhhcChhhHHH--hcCC-ccCCEEEECchhhcCc
Confidence 9999986542 2221111 1233 4578889999999965
No 354
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.04 E-value=1.2e-08 Score=97.33 Aligned_cols=185 Identities=22% Similarity=0.221 Sum_probs=106.4
Q ss_pred CHHHHHHHHHhcCCCCc--cccccCch-HHHHHHHHHHHhHhCCCcEEEe---ccHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 125 HPTIAKAAARHGMGPRG--SALICGYT-NYHRLLESCLADLKKKEDCLLC---PTGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~--sr~~~G~~-~~~~~LE~~La~~~g~e~alv~---~sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
+.+|.+|+++...+... ...-+|+. .-.+.||+-.|+.+|+|++++= .||++|+..++.++++|
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~Lrp---------- 95 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRP---------- 95 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--T----------
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCC----------
Confidence 34566677665443211 11223443 4568899999999999999985 79999999999999987
Q ss_pred CCCCCeEEEEc-CCCchhhHHHHHHhh------hcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCC--
Q 019931 199 FKDEKIAIFSD-ALNHASIIDGIRIAE------RTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSM-- 264 (334)
Q Consensus 199 ~~~~gd~Vl~d-~~~H~s~~~g~~ls~------~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~-- 264 (334)
||.+++- ..-+-.+...+-+.. ...|.+...++. .|.+.+++.+++ ++|+|.+.=--.-
T Consensus 96 ----GD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~---~tk~v~IQRSrGYs~ 168 (403)
T PF06838_consen 96 ----GDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKP---NTKMVLIQRSRGYSW 168 (403)
T ss_dssp ----T-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHT---TEEEEEEE-S-TTSS
T ss_pred ----CCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhcc---CceEEEEecCCCCCC
Confidence 6666642 222223333332221 112455555543 289999999984 7888886521111
Q ss_pred --CCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 265 --DGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 265 --~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
.-.+..++++.++.|+ -+++++||+.|+-.+- + ..+..-++|++.|||=|..|+ .||||+|+
T Consensus 169 R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE--~------~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr 238 (403)
T PF06838_consen 169 RPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE--T------QEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGR 238 (403)
T ss_dssp S----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS--S------S-GGGGT-SEEEEETTSGGGTTT-SS-EEEEES
T ss_pred CCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc--c------cCccccchhheeccceeCCCCCccCcCCEEech
Confidence 1123446666666665 4799999999875321 1 122334689999999999975 79999984
No 355
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.03 E-value=5e-10 Score=108.90 Aligned_cols=174 Identities=13% Similarity=0.033 Sum_probs=108.5
Q ss_pred CCHHHHHHHHHhcCCC--CccccccCchHHHHHHHHHHHhHhCCC---cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCc
Q 019931 124 SHPTIAKAAARHGMGP--RGSALICGYTNYHRLLESCLADLKKKE---DCLLC-PTGFAANMAVIVAVGNIASLLAGDEK 197 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~--~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~-~sG~~An~~ai~al~~~~~~~~~~~~ 197 (334)
-+|+|.+++.+-+.+. .++|-.. .....++.++.++++++.+ .++++ .||+.++..++..+...
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~-f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~--------- 83 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAP-VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK--------- 83 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChH-HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc---------
Confidence 3788888765432111 1122111 1366789999999999972 35554 66999999999877532
Q ss_pred cCCCCCeEEEEcCCCchhhH-HHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHH
Q 019931 198 SFKDEKIAIFSDALNHASII-DGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVK 276 (334)
Q Consensus 198 ~~~~~gd~Vl~d~~~H~s~~-~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~e 276 (334)
+.++|. . ..|.+-+ +......+ ..++..++...-+.++..+. +++++|++.+..|.+|.+.|+++|
T Consensus 84 ----~~l~i~-~-G~~~~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~lV~~~h~et~tG~~~pi~~I-- 150 (361)
T TIGR01366 84 ----KSLHLS-F-GEFSSKFAKAVKLAPW--LGEPIIVTADPGSAPEPQAD---PGVDVIAWAHNETSTGVAVPVRRP-- 150 (361)
T ss_pred ----cccEEe-c-CHHHHHHHHHHHhhhc--cCCceEEecCCCCCCCCccC---CCCCEEEEcccCCccceecccccc--
Confidence 233342 2 2333211 11111111 11333333221223333232 478999999999999999999887
Q ss_pred HHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEE
Q 019931 277 LRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFI 331 (334)
Q Consensus 277 la~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i 331 (334)
++++|+++++|.++++|.. ...+. ++|+++.|-.|.+|+.||+.
T Consensus 151 -~~~~g~~~iVDavqs~g~~---------~idv~-~~D~~~~s~~K~lg~~~Gl~ 194 (361)
T TIGR01366 151 -EGSDDALVVIDATSGAGGL---------PVDIA-ETDVYYFAPQKNFASDGGLW 194 (361)
T ss_pred -cccCCCeEEEEcCccccCC---------CCCHH-HCCEEEEEchhhcCCCCceE
Confidence 5899999999999998632 12333 37999999999999987653
No 356
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.00 E-value=8.4e-10 Score=104.12 Aligned_cols=219 Identities=17% Similarity=0.184 Sum_probs=134.6
Q ss_pred hhcccceeEEEeec---CccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHh-Hh-----CCCcEEEec
Q 019931 103 TFARQFKRLLLFSG---NDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLAD-LK-----KKEDCLLCP 172 (334)
Q Consensus 103 ~~~~~g~~~l~f~s---n~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~-~~-----g~e~alv~~ 172 (334)
..|.+|+.+||.-+ .-.||. +||++.+++++-. ...--+|...|+.+. .++.+.|.+ ++ |..++...-
T Consensus 70 lvDvDGN~lLDvYsQIsSvplGY-n~P~LvK~a~~p~~~~~lvnRPALg~fP~-kd~~~~l~~~ll~~APKG~~~v~tm~ 147 (484)
T KOG1405|consen 70 LVDVDGNRLLDVYSQISSVPLGY-NNPALVKAAQQPQNATMLVNRPALGNFPP-KDFAEKLRQSLLSIAPKGQKQVITML 147 (484)
T ss_pred EEecCCCeeehhhhhhcccccCC-CCHHHHHHhcChHHHHHHhccccccCCCh-hhHHHHHHHHHHhhCcchHHHHHHHh
Confidence 35788999999644 345777 5899888775421 112234556666555 344444444 22 345566778
Q ss_pred cHHHHHHHHHHHHhh------hh----------hhccCCCccCCCCCeEEE-EcCCCchhhHHHHHHhhhcC----C---
Q 019931 173 TGFAANMAVIVAVGN------IA----------SLLAGDEKSFKDEKIAIF-SDALNHASIIDGIRIAERTK----M--- 228 (334)
Q Consensus 173 sG~~An~~ai~al~~------~~----------~~~~~~~~~~~~~gd~Vl-~d~~~H~s~~~g~~ls~~~~----g--- 228 (334)
+|+.||..++++..- +| +.+- ++.|. -++-.|+ .....|+.+...+.....+. +
T Consensus 148 cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~-n~aPg-~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPa 225 (484)
T KOG1405|consen 148 CGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMI-NQAPG-APDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPA 225 (484)
T ss_pred ccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHh-cCCCC-CCceeeeeeccccccccccccccccCccccccCCCC
Confidence 999999999987521 00 0000 00010 0223344 34556765543332221110 0
Q ss_pred -----cEE--EEeeC------C------CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCcc----CHHHHHHHHHHcC
Q 019931 229 -----VEV--FVYKH------C------DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFA----PMVELVKLRRKYG 282 (334)
Q Consensus 229 -----~~v--~~~~~------~------D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~----pL~~L~ela~k~g 282 (334)
+.+ ..||. | .++++|++|.+.. .....|++|++.+..|+-- -+.+|+++++|||
T Consensus 226 FdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~ 305 (484)
T KOG1405|consen 226 FDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHG 305 (484)
T ss_pred CCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcC
Confidence 011 11221 1 3678888887653 2456899999999988742 2889999999999
Q ss_pred CEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccCCccE
Q 019931 283 FLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 283 a~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~~GG~ 330 (334)
+.+||||+|..| |.+|.-.+ +|+++.+..|++ ||||-|=. |||
T Consensus 306 v~fivDEVQTGg--GaTGk~WaHehw~l~~PpD~v--TFSKK~q~-gGf 349 (484)
T KOG1405|consen 306 VAFIVDEVQTGG--GATGKFWAHEHWNLDSPPDVV--TFSKKFQT-GGF 349 (484)
T ss_pred eEEEeeeeecCC--CccCceeeehhcCCCCCccce--ehhhhhhc-Ccc
Confidence 999999999963 77887655 789998777866 99999853 444
No 357
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.86 E-value=9.8e-08 Score=92.39 Aligned_cols=200 Identities=20% Similarity=0.182 Sum_probs=133.7
Q ss_pred eeEEEeec---CccCCCC-CCHHHHHHHHHhcCCCCc---cccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSG---NDYLGLS-SHPTIAKAAARHGMGPRG---SALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~s---n~yLgl~-~~p~v~~a~~~~g~g~~~---sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
++++|.++ +-.||-+ -+|++++++.+.....-. ++-......-...+.+.++...+++.+++++..+.|...+
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~ 99 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLT 99 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHH
Confidence 66777766 2356766 478888865432221110 1111111222246777888888899999999999999988
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcC----CCchhhHHHHHHhhhcCCcEEEEeeCC---CHHHHHHHHhcCCCCcE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDA----LNHASIIDGIRIAERTKMVEVFVYKHC---DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~----~~H~s~~~g~~ls~~~~g~~v~~~~~~---D~~~Le~~l~~~~~~~~ 254 (334)
+.++..+ +.+|++-. ..|+++.+.++++ |++++.+... ...+++..+.+ +++
T Consensus 100 ~~al~~~--------------~EvVis~g~lV~gg~~~v~d~~~~a----G~~l~EvG~tn~t~~~d~~~AIne---~ta 158 (395)
T COG1921 100 LNALAEG--------------KEVVVSRGELVEGGAFRVPDIIRLA----GAKLVEVGTTNRTHLKDYELAINE---NTA 158 (395)
T ss_pred HhhhccC--------------CeEEEEccccccCCCCChhHHHHHc----CCEEEEecccCcCCHHHHHHHhcc---CCe
Confidence 8877653 45555421 4788899999999 8998887643 67788888876 555
Q ss_pred EE--EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCccEE
Q 019931 255 VV--VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFI 331 (334)
Q Consensus 255 lV--v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i 331 (334)
++ +..+-|.+++ ..++++++++|+++|+.+++|.+-+.-+= + -...- .-+..++|+|+.|-.|.|| +++|+|
T Consensus 159 ~llkV~s~~~~f~~-~l~~~~l~~ia~~~~lpvivD~aSg~~v~-~-e~~l~--~~la~GaDLV~~SgdKllgGPqaGii 233 (395)
T COG1921 159 LLLKVHSSNYGFTG-MLSEEELVEIAHEKGLPVIVDLASGALVD-K-EPDLR--EALALGADLVSFSGDKLLGGPQAGII 233 (395)
T ss_pred eEEEEeeccccccc-cccHHHHHHHHHHcCCCEEEecCCccccc-c-ccchh--HHHhcCCCEEEEecchhcCCCccceE
Confidence 44 3333333334 44788899999999999999998765321 1 11111 1123568999999999995 589999
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+|+
T Consensus 234 ~Gk 236 (395)
T COG1921 234 VGK 236 (395)
T ss_pred ech
Confidence 984
No 358
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.85 E-value=3.3e-08 Score=96.17 Aligned_cols=175 Identities=14% Similarity=0.049 Sum_probs=109.9
Q ss_pred CCHHHHHHHHHh-----cCCCCccccccCc---hHHHHHHHHHHHhHhCC-C--cEEEe-ccHHHHHHHHHHHHhhhhhh
Q 019931 124 SHPTIAKAAARH-----GMGPRGSALICGY---TNYHRLLESCLADLKKK-E--DCLLC-PTGFAANMAVIVAVGNIASL 191 (334)
Q Consensus 124 ~~p~v~~a~~~~-----g~g~~~sr~~~G~---~~~~~~LE~~La~~~g~-e--~alv~-~sG~~An~~ai~al~~~~~~ 191 (334)
.+++|++|+.++ ..|.+......-. ....+++.++|+++++. + .++++ +||+.|+.+++..+..++
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g-- 91 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGG-- 91 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCC--
Confidence 478899987654 1222211111111 26778999999999995 2 35555 788999999998887642
Q ss_pred ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE-EEEee--C--CCHHHHHH-HHhcCCCCcEEEEEcCCCCCC
Q 019931 192 LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE-VFVYK--H--CDMSHLKT-LLSCCTMRKKVVVTDSLFSMD 265 (334)
Q Consensus 192 ~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~-v~~~~--~--~D~~~Le~-~l~~~~~~~~lVv~e~v~n~~ 265 (334)
++.++|......|.. ...+++. |.. +...+ . .+..++++ .+++ ++++|.+.+.-+.+
T Consensus 92 ---------~~~l~i~~G~fg~r~----~~~a~~~-g~~~~~~~~~~~g~~~~~~~~~~~l~~---~~~~V~~th~eTst 154 (360)
T PRK05355 92 ---------KKADYVDTGSWSKKA----IKEAKKY-GEVNVAASSEDDGFTYIPPLDEWQLSD---DAAYVHYTSNETID 154 (360)
T ss_pred ---------CeEEEEECCHHHHHH----HHHHHHh-CCceEEecccccCCCCCCChhhccCCC---CCCEEEEccCCCcc
Confidence 124455444444433 2233221 333 22222 1 23344444 5543 67888888888889
Q ss_pred CCcc-CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEee
Q 019931 266 GDFA-PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 266 G~~~-pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
|... |+++| +|++++||.++++|.. ...+. +.|+++.|-.|.||+.| |++..
T Consensus 155 Gv~~~~i~~i------~g~l~vVDavss~g~~---------~idv~-~~d~~~~ssqK~lgP~Glg~l~~ 208 (360)
T PRK05355 155 GTEFHELPDT------GDVPLVADMSSDILSR---------PIDVS-KFGLIYAGAQKNIGPAGLTIVIV 208 (360)
T ss_pred eEecCccccc------CCCcEEEEcCccccCc---------cCCHH-HccEEEEeccccccCCceEEEEE
Confidence 9997 67766 8999999999998632 12222 34799999999999887 66654
No 359
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.84 E-value=4.7e-08 Score=94.74 Aligned_cols=150 Identities=15% Similarity=0.029 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHhHhCCC---cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh
Q 019931 150 NYHRLLESCLADLKKKE---DCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER 225 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e---~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~ 225 (334)
..++++++.|+++++.+ .++++ .||+.|+.+++..+..++ ++.++|......|.. ...+++
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~-----------~~~l~i~~G~fg~r~----~~~a~~ 101 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEG-----------KVADYIVTGAWSKKA----AKEAKK 101 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCC-----------CeEEEEECCHHHHHH----HHHHHH
Confidence 56788999999999952 36666 559999999999887541 112333333333322 223322
Q ss_pred cCCcEEEEee------CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCC
Q 019931 226 TKMVEVFVYK------HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKN 299 (334)
Q Consensus 226 ~~g~~v~~~~------~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~ 299 (334)
.|. +..+. ..+..+++..... +++++|.+.+.-+.+|...| ++++.++++++||.++++|..
T Consensus 102 -~g~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~--- 169 (349)
T TIGR01364 102 -YGV-VNVVASGKEGNYTKIPDPSTWEIS--EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSR--- 169 (349)
T ss_pred -hCC-cEEEeccccCCCCCCCCHHhcCCC--CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCc---
Confidence 145 33333 3344445533222 36788888888888998766 677788999999999998632
Q ss_pred CcccccccCCCCCccEEEecCcccccCCc-cEEee
Q 019931 300 GGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 300 G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
...+ .+.|+++.|..|+||+.| |++..
T Consensus 170 ------~id~-~~~d~~~~ssqK~lgP~Glg~l~~ 197 (349)
T TIGR01364 170 ------PIDV-SKFGLIYAGAQKNIGPAGLTVVIV 197 (349)
T ss_pred ------cCCH-HHccEEEEecccccCCCceEEEEE
Confidence 1222 235799999999999887 66654
No 360
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.80 E-value=2.6e-07 Score=95.29 Aligned_cols=181 Identities=18% Similarity=0.123 Sum_probs=107.7
Q ss_pred EEeecC-ccCCCCCCHHHHHH------HHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCc--EEEeccHHHHHHHHH
Q 019931 112 LLFSGN-DYLGLSSHPTIAKA------AARHGMGPRGSALICGYTNYHRLLESCLADLKKKED--CLLCPTGFAANMAVI 182 (334)
Q Consensus 112 l~f~sn-~yLgl~~~p~v~~a------~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~--alv~~sG~~An~~ai 182 (334)
+.|.+. .|+|....|-..-+ +.-|...........+.+.+-+++-+.|++++|.+. ..++++|++||..++
T Consensus 78 v~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL 157 (608)
T TIGR03811 78 VPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGL 157 (608)
T ss_pred CCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHH
Confidence 355665 78887754332221 222333222222222233444556666777778653 578899999999988
Q ss_pred HHHhhhhhh---ccCCC---------------------------------------cc--CCCCCeEEEEcCCCchhhHH
Q 019931 183 VAVGNIASL---LAGDE---------------------------------------KS--FKDEKIAIFSDALNHASIID 218 (334)
Q Consensus 183 ~al~~~~~~---~~~~~---------------------------------------~~--~~~~gd~Vl~d~~~H~s~~~ 218 (334)
-+....-.+ +.... .+ ...+--.|++....|.|+..
T Consensus 158 ~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~K 237 (608)
T TIGR03811 158 WYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLK 237 (608)
T ss_pred HHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHH
Confidence 764431000 00000 00 00001158888889999999
Q ss_pred HHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCC--C-CcEEEEEcCCCCCCCCccCHHHHHHHH---HHcCC--EE
Q 019931 219 GIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCT--M-RKKVVVTDSLFSMDGDFAPMVELVKLR---RKYGF--LL 285 (334)
Q Consensus 219 g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~--~-~~~lVv~e~v~n~~G~~~pL~~L~ela---~k~ga--~L 285 (334)
++.+...+ ...++.++. .|+++|++.|+++. . .+.+||...-.-..|.+-||++|.++| +++|+ ||
T Consensus 238 Aa~ilGlG-~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~l 316 (608)
T TIGR03811 238 AADIIGIG-LDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYL 316 (608)
T ss_pred HHHHcCCC-cccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeE
Confidence 99887321 114566653 38999999997541 1 233343333333579999999999999 67897 69
Q ss_pred EEecCccc
Q 019931 286 VLDDAHGT 293 (334)
Q Consensus 286 ivDeAh~~ 293 (334)
+||.|++.
T Consensus 317 HVDAAyGG 324 (608)
T TIGR03811 317 HVDAAYGG 324 (608)
T ss_pred eeeccccc
Confidence 99999995
No 361
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.76 E-value=3e-07 Score=86.36 Aligned_cols=194 Identities=18% Similarity=0.147 Sum_probs=121.0
Q ss_pred eEEEeecCccCCCCCCHHHHH----HHHHhcCCCCcccc--ccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAK----AAARHGMGPRGSAL--ICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g~~~sr~--~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
.+|-+++|. ||...+....+ ++.+|+.+.-.+-. -..-..+-+.|-.+|+-+.|+. +++++.|-+.-+.-+
T Consensus 31 ~viyLdgnS-LGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~ 109 (407)
T COG3844 31 GVIYLDGNS-LGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKV 109 (407)
T ss_pred CeEEeeccc-cccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHH
Confidence 445566776 88854322222 55677765322111 1111244567888999999963 355554444333334
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHH-HHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGI-RIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~-~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
+.+..++ +.+..+|+++..+.++-.... -++... +......-...+.++++++.. .+.+|++.+
T Consensus 110 L~aalr~-----------~~~r~vIv~E~~~fpTdly~a~g~~~~~-~~~~~~~~~~~P~~~~~~~~d---d~AvV~L~~ 174 (407)
T COG3844 110 LAAALRP-----------QEGRRVIVSEGDNFPTDLYIAEGLADLL-GIGYDLEGVIAPRALEEAITD---DVAVVLLSH 174 (407)
T ss_pred HHHHhcc-----------CCCceEEeecCCCCCcchhhhcchhhhh-cccccceeeeChHHHHHhhcc---ceEEEEecc
Confidence 5444443 113456777776666521111 111100 111111122467788888875 789999999
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCccccc-CCc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAG-CQG 328 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G-~~G 328 (334)
|.--+|..-++.+|.++++++|++++.|=||+.|.+.- .+ ..++|+-++|-.|.++ +.|
T Consensus 175 V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~---------~Lh~~gaDfaigcsyKYLNgGPG 235 (407)
T COG3844 175 VNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPV---------DLHAAGADFAIGCSYKYLNGGPG 235 (407)
T ss_pred ccccccceeeHHHHHHHHHhcCceEEeehhcccCCcce---------eecccCCCeeeeeeceeccCCCC
Confidence 99999999999999999999999999999999987521 11 2568999999999994 345
No 362
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.75 E-value=4.1e-09 Score=101.09 Aligned_cols=160 Identities=19% Similarity=0.224 Sum_probs=36.2
Q ss_pred HHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcC-CC----chhhHHHHHHhhhcC
Q 019931 153 RLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDA-LN----HASIIDGIRIAERTK 227 (334)
Q Consensus 153 ~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~-~~----H~s~~~g~~ls~~~~ 227 (334)
..+++.++++.|+|++++.++..+|.+.++.+++.. .++|++.. +. ...+.+-++.+
T Consensus 50 ~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~--------------~EvIvsRGelVeiGgsFRip~vm~~s---- 111 (367)
T PF03841_consen 50 AHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKG--------------KEVIVSRGELVEIGGSFRIPDVMRQS---- 111 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccc--------------cccccccccccccccccccccccccc----
Confidence 458889999999999999999999999999887652 33444321 11 11244555555
Q ss_pred CcEEEEeeCC---CHHHHHHHHhcCCCCcEEEEEcC--CCCCCC--CccCHHHHHHHHHHcCCEEEEecCccccc----c
Q 019931 228 MVEVFVYKHC---DMSHLKTLLSCCTMRKKVVVTDS--LFSMDG--DFAPMVELVKLRRKYGFLLVLDDAHGTFV----C 296 (334)
Q Consensus 228 g~~v~~~~~~---D~~~Le~~l~~~~~~~~lVv~e~--v~n~~G--~~~pL~~L~ela~k~ga~LivDeAh~~Gv----~ 296 (334)
|++++.+... .+.+.|+.+.+ +|.+|+--+ -|.+.| ...+++++++++++|++.+|+|-.-+..+ +
T Consensus 112 Ga~lvEVGttN~t~~~Dye~AI~e---~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~ 188 (367)
T PF03841_consen 112 GARLVEVGTTNRTHLSDYEKAITE---NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPY 188 (367)
T ss_dssp ----------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccc
Confidence 7887777654 45667777765 777765443 333444 34679999999999999999998653211 1
Q ss_pred cCCCcccccccCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
|-....... .-+..++|++++|-.|.+|+ +.|+|+|+
T Consensus 189 gl~~Ep~v~-~~~~~GaDlV~fSGdKlLGGPQaGiI~Gk 226 (367)
T PF03841_consen 189 GLPDEPTVQ-EYLAAGADLVTFSGDKLLGGPQAGIIVGK 226 (367)
T ss_dssp -----------CCCCT-SEEEEETTSSSSS-S-EEEEEE
T ss_pred cCccccHHH-HHhhcCCCEEEEECCCcCCCCCeEEEEeC
Confidence 111111111 11346789999999999965 78999874
No 363
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.74 E-value=2.8e-07 Score=99.52 Aligned_cols=195 Identities=19% Similarity=0.158 Sum_probs=124.1
Q ss_pred EEEeecCccCCCCCCHHHHHHHHH---hcCCC--CccccccCchHHHHHHHHHHHhHhCCCc--EEEeccHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAAR---HGMGP--RGSALICGYTNYHRLLESCLADLKKKED--CLLCPTGFAANMAVIV 183 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~---~g~g~--~~sr~~~G~~~~~~~LE~~La~~~g~e~--alv~~sG~~An~~ai~ 183 (334)
+.+|.+..|.+.-.++.|.+.+.+ |=+.. -..-...|..+...++.+.++++.|.+. +-++.+++++..+++.
T Consensus 77 ~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~ 156 (954)
T PRK05367 77 FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMAL 156 (954)
T ss_pred CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHH
Confidence 345666666666444444343322 11111 1111245666777889999999999874 4666777777777776
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
++.-. .++++.|+++...|++....++......|.+++.++..+ +++ . .++..+++.. .|
T Consensus 157 a~~~~-----------~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d~~----~--~~~~~vlvq~-p~ 216 (954)
T PRK05367 157 AKRVS-----------KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--ALD----H--DDVFGVLLQY-PG 216 (954)
T ss_pred hhhhc-----------cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--CCC----c--ccEEEEEEec-CC
Confidence 55321 012478988899999987766543233488888887643 111 1 2454555444 46
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccc-----ccCCc-cEEee
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKA-----AGCQG-GFIAC 333 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa-----~G~~G-G~i~~ 333 (334)
.+|.+.|+++|.++|+++|+++++|..+..+.+... .-.-++||++++..|- ||+.| ||+++
T Consensus 217 ~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~--------pge~GaDi~vgs~qkfg~P~g~GGP~aGflav 284 (954)
T PRK05367 217 TSGEVRDYTALIAAAHARGALVAVAADLLALTLLTP--------PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAV 284 (954)
T ss_pred CCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCC--------hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEE
Confidence 689999999999999999999999987743322211 1124689999999996 55443 77765
No 364
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.69 E-value=5.9e-07 Score=96.96 Aligned_cols=198 Identities=20% Similarity=0.164 Sum_probs=127.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc---CCCCcc--ccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG---MGPRGS--ALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g---~g~~~s--r~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
+.+.||.+..|.++-.++.|.+++.+.. ...+.+ -...|......++...++++.|.+ .+-++.+++++..++
T Consensus 102 ~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~ 181 (993)
T PLN02414 102 KVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAM 181 (993)
T ss_pred CccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHH
Confidence 4466777777777766666656554321 111111 222555666788999999999975 466777777777777
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+.++.-. .++++.|+++...|++....++-.....|.+++.++..+.+ ... .....+++ +.
T Consensus 182 ~~a~~~~-----------~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~----~~~---~~v~~vlv-q~ 242 (993)
T PLN02414 182 AMCNNIL-----------KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD----YSS---GDVCGVLV-QY 242 (993)
T ss_pred HHHHhcc-----------cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc----ccc---CceEEEEE-ec
Confidence 6654311 12357788888899987777654323347888888754322 111 12333443 34
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc------cEEee
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG------GFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G------G~i~~ 333 (334)
.|.+|.+.|+++|.++|+++|+++++ .++..+..+- .. .-.-++||++++..|-.++.| ||+++
T Consensus 243 P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l------~~-pge~GADi~vgsgqKwg~P~G~GGP~aGflav 312 (993)
T PLN02414 243 PATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTML------KP-PGEWGADIVVGSAQRFGVPMGYGGPHAAFLAT 312 (993)
T ss_pred CCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCC------CC-HhhccCcEEEECCCccccCCCCCCCCeeEEEE
Confidence 45689999999999999999999999 7777653321 00 112468999999999875555 77765
No 365
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=98.64 E-value=7.7e-07 Score=83.15 Aligned_cols=173 Identities=17% Similarity=0.109 Sum_probs=113.5
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCC
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKD 201 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~ 201 (334)
+++|++|+..-..|...... ..+.+++.+-+...|... ..+++ .||..+..+++.-++.|
T Consensus 29 ~~~V~~A~~~~~lgh~sPe~----~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~leP------------- 91 (385)
T KOG2862|consen 29 SGRVQEAMSRPSLGHMSPEF----VQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEP------------- 91 (385)
T ss_pred CHHHHHhhcCCccccCCHHH----HHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCC-------------
Confidence 46666666544444322111 134456666666666643 33444 78888988888877765
Q ss_pred CCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC-HHHHH
Q 019931 202 EKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP-MVELV 275 (334)
Q Consensus 202 ~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p-L~~L~ 275 (334)
||.|++-...-.+.. ++... +..|+++..++. -.++.+++.|.++ ++++|++.+.-+.+|...| ++.+-
T Consensus 92 -gd~vLv~~~G~wg~r-a~D~~-~r~ga~V~~v~~~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~~~~~g 166 (385)
T KOG2862|consen 92 -GDNVLVVSTGTWGQR-AADCA-RRYGAEVDVVEADIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDLLAISG 166 (385)
T ss_pred -CCeEEEEEechHHHH-HHHHH-HhhCceeeEEecCcccCccHHHHHHHHHhc--CCceEEEEecCccccccchHHHHHH
Confidence 666665433322211 11122 223788877753 3789999999874 6788888888888999999 67788
Q ss_pred HHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 276 KLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 276 ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
++|++|+++|+||.+-+.| |.-+. + -+.++|+...---|++|..
T Consensus 167 ~lc~k~~~lllVD~VaSlg-----gt~F~--m-DewgVDvaytgSQKaL~aP 210 (385)
T KOG2862|consen 167 ELCHKHEALLLVDTVASLG-----GTEFE--M-DEWGVDVAYTGSQKALGAP 210 (385)
T ss_pred HHhhcCCeEEEEechhhcC-----Cccce--e-hhhcccEEEecchhhcCCC
Confidence 9999999999999998865 22221 1 1356788887788999864
No 366
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.59 E-value=8e-07 Score=86.20 Aligned_cols=150 Identities=18% Similarity=0.179 Sum_probs=107.8
Q ss_pred cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHH
Q 019931 167 DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHL 242 (334)
Q Consensus 167 ~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~L 242 (334)
+.+++++.+.+..-+++.+++. +|.|+++...+.+.+..++.. |+++++++.+ +++.|
T Consensus 126 diiit~G~t~~l~~~l~~~~N~--------------gd~vlie~~ty~~AL~s~~a~----gv~~ipv~md~~Gi~pE~l 187 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINR--------------GDHVLIEEYTYPSALQSMEAL----GVKIIPVKMDQDGIDPESL 187 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcC--------------CCceEEecccchHHHHhcccc----CceEEeccccCCCCCHHHH
Confidence 3566666688999999998875 899999999888887777766 8888888754 89999
Q ss_pred HHHHhcCC------CCcEEE-EEcCCCCCCCCccCH---HHHHHHHHHcCCEEEEecCcccccccC-CCc----------
Q 019931 243 KTLLSCCT------MRKKVV-VTDSLFSMDGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGK-NGG---------- 301 (334)
Q Consensus 243 e~~l~~~~------~~~~lV-v~e~v~n~~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~-~G~---------- 301 (334)
++.+..-+ ++++++ -+-+-.||+|...++ ++|.+||+||++++|.||.|.+.-++. ++.
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~ 267 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSS 267 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccH
Confidence 99987532 235554 456667899988875 479999999999999999998764441 000
Q ss_pred -ccc-----cccCCC-CCccEEEecCcccccC--CccEEeeC
Q 019931 302 -GVA-----EQFNCE-RDVDICVGTLSKAAGC--QGGFIACR 334 (334)
Q Consensus 302 -g~~-----~~~~~~-~~~Div~~SlsKa~G~--~GG~i~~~ 334 (334)
-+. ...++. .+..|-+.||||-+++ .=||+.++
T Consensus 268 ~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~ 309 (472)
T KOG0634|consen 268 SMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGN 309 (472)
T ss_pred HHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecC
Confidence 000 001111 2223788999999964 34888764
No 367
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.58 E-value=1.2e-06 Score=85.16 Aligned_cols=162 Identities=17% Similarity=0.154 Sum_probs=117.6
Q ss_pred cccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 144 LICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 144 ~~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
.+.|+..+..+|++.|++..|.+.+-+. ++|++.=.+-+.++..- .-..++ +..++|++....|+.-.....+
T Consensus 103 ~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~Y--He~rG~----~~R~~~LIP~SAHGTNPASAam 176 (496)
T COG1003 103 QVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAY--HESRGE----GHRNICLIPDSAHGTNPASAAM 176 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHH--HHHcCC----CcCcEEEeeccccCCChhhHhh
Confidence 3567788889999999999999988777 67766444333332210 000111 1357888899999988777777
Q ss_pred hhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCc-cCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 223 AERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDF-APMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 223 s~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~-~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
. |.+++.++.+ |+++|++++.+ ++..+.+..++ -.|.. .++.+|+++.+++|..|+.|.|.-=.++
T Consensus 177 ~----G~~VV~V~~~~~G~VDlddLk~k~~~---~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v 248 (496)
T COG1003 177 A----GFKVVVVKCDENGNVDLDDLRAKAED---NLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIV 248 (496)
T ss_pred c----CceEEEEecCCCCCccHHHHHHHhcc---ceeEEEeccCc-ccccchhhHHHHHHHHHHcCCEEEecCcchhhhh
Confidence 7 8899998865 89999999985 77777766665 34655 4599999999999999999999876666
Q ss_pred cCCCcccccccCCCCCccEEEecCcccccC
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
|..-.| .-+.||+-.-|+|+|..
T Consensus 249 G~~rPG-------d~G~DV~HlNLHKTF~i 271 (496)
T COG1003 249 GLARPG-------DMGFDVVHLNLHKTFCI 271 (496)
T ss_pred cccccc-------ccccceEEeeccccccc
Confidence 643222 12468888899999964
No 368
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.37 E-value=6.3e-06 Score=79.94 Aligned_cols=167 Identities=13% Similarity=0.074 Sum_probs=107.3
Q ss_pred HHHHHHHhHhCC---CcEEEeccHHHHHHHHHHHHhhhhhhccCCCc--cCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 154 LLESCLADLKKK---EDCLLCPTGFAANMAVIVAVGNIASLLAGDEK--SFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 154 ~LE~~La~~~g~---e~alv~~sG~~An~~ai~al~~~~~~~~~~~~--~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
++-.++.+..|- .+-++.++|+.+|+-++.+...+ .++.... -..-+.-++++.+-.|.|+..+......+ .
T Consensus 145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk--~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~g-t 221 (510)
T KOG0629|consen 145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYK--NFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLG-T 221 (510)
T ss_pred HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhh--cCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccC-C
Confidence 444555555553 35799999999999988764332 1111000 00012456677888999999888776221 2
Q ss_pred cEEEEeeCC-----CHHHHHHHHhcCCCC---cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccccc-CC
Q 019931 229 VEVFVYKHC-----DMSHLKTLLSCCTMR---KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCG-KN 299 (334)
Q Consensus 229 ~~v~~~~~~-----D~~~Le~~l~~~~~~---~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G-~~ 299 (334)
..++.++.+ ++++||++|.+++.+ +.+|-...=.-..|.+-||+.|+++|++|++|+.||.|.+.|++- +.
T Consensus 222 d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k 301 (510)
T KOG0629|consen 222 DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRK 301 (510)
T ss_pred ceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChh
Confidence 455666654 899999999876432 344433333334688999999999999999999999999987653 22
Q ss_pred CcccccccCCCCCccEEEecCcccccC
Q 019931 300 GGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 300 G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
-+.. .-|++ .++-+.-+-+|.+|+
T Consensus 302 ~R~k--l~Gie-ra~SvtwnpHK~~ga 325 (510)
T KOG0629|consen 302 HRHK--LTGIE-RANSVTWNPHKLMGA 325 (510)
T ss_pred hHhh--ccCcc-ccCceeecHHHhhcC
Confidence 2211 12333 356677778888875
No 369
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.36 E-value=1.2e-06 Score=80.18 Aligned_cols=151 Identities=19% Similarity=0.166 Sum_probs=96.4
Q ss_pred HHHHHHhHhC--CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEE
Q 019931 155 LESCLADLKK--KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVF 232 (334)
Q Consensus 155 LE~~La~~~g--~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~ 232 (334)
+.-.++.-.+ .+..++-.+.-+.+..++++.+.|| .+.|+..++.+..+.-..... ++.++
T Consensus 74 ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PG-------------keKIl~cPPtysMY~v~A~iN----d~eVv 136 (375)
T KOG0633|consen 74 LSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPG-------------KEKILDCPPTYSMYVVDAAIN----DAEVV 136 (375)
T ss_pred hhhhcccCCCCCccceEEecCcHHHHHHHHhheecCC-------------ccceeecCCcceeEEEEeecC----CceEE
Confidence 4444444344 2344444555677888888888762 355665555443322122233 67787
Q ss_pred EeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc-CCEEEEecCcccccccCCCc-cccc
Q 019931 233 VYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY-GFLLVLDDAHGTFVCGKNGG-GVAE 305 (334)
Q Consensus 233 ~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~-ga~LivDeAh~~Gv~G~~G~-g~~~ 305 (334)
.++.+ |.+++...++..+ ..|++++.++.||+|.+.-.+.|.++.+-. +.++++||||... .|..-+ .+..
T Consensus 137 kvpl~pdF~lnvdai~evl~~ds-~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidF-sg~~S~~~lV~ 214 (375)
T KOG0633|consen 137 KVPLNPDFSLNVDAIAEVLELDS-KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDF-SGVESRMKLVK 214 (375)
T ss_pred EecCCCCccccHHHHHHHHhccc-cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEee-ccccccchHhH
Confidence 77754 7788888887533 689999999999999998888777777653 6899999999752 221000 1111
Q ss_pred ccCCCCCccEEEecCcccccCCc
Q 019931 306 QFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~~G 328 (334)
.+ |+ =+++-||||+||..|
T Consensus 215 kY---pN-LivlqTlSKsfGLAG 233 (375)
T KOG0633|consen 215 KY---PN-LIVLQTLSKSFGLAG 233 (375)
T ss_pred hC---Cc-eeehhhhhhhcCcce
Confidence 11 23 277899999999877
No 370
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.29 E-value=1.3e-05 Score=74.79 Aligned_cols=164 Identities=20% Similarity=0.245 Sum_probs=104.7
Q ss_pred cCchH-HHHHHHHHHHhHhCCCcEEEe---ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEE-EcCCCchhhHHHH
Q 019931 146 CGYTN-YHRLLESCLADLKKKEDCLLC---PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIF-SDALNHASIIDGI 220 (334)
Q Consensus 146 ~G~~~-~~~~LE~~La~~~g~e~alv~---~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl-~d~~~H~s~~~g~ 220 (334)
+|+.+ -.+.||+-.|+.+|+|.+++- -||+.|+..++..+++| ||..+ ....-+-.+.+-+
T Consensus 60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRp--------------gDell~i~G~PYDTLeevI 125 (416)
T COG4100 60 YGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRP--------------GDELLYITGSPYDTLEEVI 125 (416)
T ss_pred CCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCC--------------CCeEEEecCCcchhHHHHh
Confidence 34444 357799999999999998764 79999999999999887 45444 2222222232222
Q ss_pred HHhhh------cCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCC----CCCCccCHHHHHHHHHHc--CC
Q 019931 221 RIAER------TKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFS----MDGDFAPMVELVKLRRKY--GF 283 (334)
Q Consensus 221 ~ls~~------~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n----~~G~~~pL~~L~ela~k~--ga 283 (334)
-+... ..+.+..-++. -|.+.++..+++ +||+|.+.--.. |.-.++.++++.++.|+. ++
T Consensus 126 G~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~---~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ 202 (416)
T COG4100 126 GLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISD---RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNV 202 (416)
T ss_pred ccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCc---cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCE
Confidence 11110 01233333332 288888888875 788887653211 112345577777777764 68
Q ss_pred EEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 284 LLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 284 ~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+++||+.++-.+- +..+..-++|++.|||=|.-|+ .||||+|.
T Consensus 203 ivFVDNCYGEFvE--------~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk 249 (416)
T COG4100 203 IVFVDNCYGEFVE--------EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGK 249 (416)
T ss_pred EEEEeccchhhhh--------ccCccccchhhhccceeeCCCCceeeccceeech
Confidence 9999999875321 1122334679999999999875 69999874
No 371
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.29 E-value=1.5e-05 Score=78.88 Aligned_cols=163 Identities=20% Similarity=0.189 Sum_probs=100.9
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcE--EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDC--LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI 222 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~a--lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l 222 (334)
..|.....-+++..++++.|.+-+ =++..++++-.+++++.... +++.+.|+.+...|+.....++-
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~-----------~~~~~~vlv~~~~hP~~~~v~~t 173 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRAT-----------KRKRNKVLVPESLHPQTRAVLRT 173 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHH-----------TT---EEEEETTS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhc-----------ccCCcEEEEcCCcChhhHHHHHH
Confidence 567777888999999999999864 45566666666666554322 11245788888888887776654
Q ss_pred hhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcc
Q 019931 223 AERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG 302 (334)
Q Consensus 223 s~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g 302 (334)
.....+.+++.++..+..... ..++..|++..|+. .|.+.++++|.++++++|+++++ .+--.- + +
T Consensus 174 ~a~~~g~~iv~~~~~~~~~~d------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~a-L-----~ 239 (429)
T PF02347_consen 174 YAAPLGIEIVEVPLDEDGTTD------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNA-L-----G 239 (429)
T ss_dssp HCCHCCEEEEEE-BBTTCSB-------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCG-C-----C
T ss_pred hhhhCCeEEEEecccccCCcc------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHH-H-----h
Confidence 323347888888754221111 24788898888874 69999999999999999999987 444322 1 1
Q ss_pred cccccCCCCCccEEEecCcccccC---Cc----cEEeeC
Q 019931 303 VAEQFNCERDVDICVGTLSKAAGC---QG----GFIACR 334 (334)
Q Consensus 303 ~~~~~~~~~~~Div~~SlsKa~G~---~G----G~i~~~ 334 (334)
.....+ .-++||+++. +|.||. .| |+++++
T Consensus 240 ~l~~Pg-e~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~ 276 (429)
T PF02347_consen 240 GLKSPG-EYGADIVVGE-HQTFGIPMGFGGPGAGFFAVR 276 (429)
T ss_dssp TC--GG-GGT-SEEEEC-CTTTT---CCC-S--EEEEE-
T ss_pred CcCChh-hcCccEEeeC-CCCCcccCCCCCCCeeeEEEh
Confidence 111111 2357999887 999986 23 677763
No 372
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.25 E-value=1.4e-05 Score=77.56 Aligned_cols=154 Identities=16% Similarity=0.187 Sum_probs=94.8
Q ss_pred hHhCC---CcEEEeccHH-HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC
Q 019931 161 DLKKK---EDCLLCPTGF-AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH 236 (334)
Q Consensus 161 ~~~g~---e~alv~~sG~-~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~ 236 (334)
+..|. ..|++.+-.+ +++...+.++..+ .+.+.|+.++..|.|-...+..+ |.+++.++.
T Consensus 67 ~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r------------~~a~~Viw~ridqkSc~kai~~A----Gl~~~vV~~ 130 (389)
T PF05889_consen 67 RLAGLRSVKSCFVVPMATGMSLTLCLLALRMR------------PKAKYVIWPRIDQKSCFKAIERA----GLEPVVVEN 130 (389)
T ss_dssp HHTTHTTHCEEEEESS-HHHHHHHHHHHHHHH------------CT--EEEEEEEETHHHHHHHHHT----T-EEEEE-E
T ss_pred HHcCCccccceEEEecccccHHHHHHHHHhcc------------cCCceEEEeeccccchHHHHHhc----CCeEEEeec
Confidence 34563 4577774332 3455556666432 13688998999999988888777 777776653
Q ss_pred --------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC-HHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 237 --------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP-MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 237 --------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p-L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
.|.+.+|+++++......+.+..++....+..+| +++|.++|++||+..++-.||+.-.- ..-.-+-+.+
T Consensus 131 ~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~ 209 (389)
T PF05889_consen 131 VLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAW 209 (389)
T ss_dssp EEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHH
T ss_pred cCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHH
Confidence 2788999999876556677777777777788888 99999999999999999999986210 0000000000
Q ss_pred CCCCCccEEEecCcccc-cCCccEEe
Q 019931 308 NCERDVDICVGTLSKAA-GCQGGFIA 332 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~-G~~GG~i~ 332 (334)
. ...+|+.+-|+.|-| =+.||-++
T Consensus 210 ~-~GRvda~vqS~dkNF~VPvGgai~ 234 (389)
T PF05889_consen 210 R-VGRVDAFVQSTDKNFMVPVGGAIM 234 (389)
T ss_dssp H-HSTCSEEEEEHHHHHCEESSHEEE
T ss_pred h-cCCcceeeeecCCCEEecCCCcEE
Confidence 0 124677888888888 33554443
No 373
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.23 E-value=3.4e-05 Score=74.23 Aligned_cols=175 Identities=13% Similarity=0.104 Sum_probs=108.1
Q ss_pred CccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh
Q 019931 140 RGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS 215 (334)
Q Consensus 140 ~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s 215 (334)
+++.-..|..-+.+.+.+-|.+.-|. +++.++++.+.|...+++.+++. +.+=|++.-+-+..
T Consensus 107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-------------~~~GvliPiPQYPL 173 (475)
T KOG0258|consen 107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-------------KKTGVLIPIPQYPL 173 (475)
T ss_pred cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-------------CCCceEeecCCCch
Confidence 33334444444445555555555552 34556666678888888877652 34556666555554
Q ss_pred hHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC--CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCC
Q 019931 216 IIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT--MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGF 283 (334)
Q Consensus 216 ~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~--~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga 283 (334)
+...+.+. +...+.|-. .|.++|++.+.+.. .+++++++=++-||+|.+.- +++|..+|.++|+
T Consensus 174 YsAti~l~----~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l 249 (475)
T KOG0258|consen 174 YSATISLL----GGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGL 249 (475)
T ss_pred hHHHHHHh----CCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCe
Confidence 44444444 455554432 38999999887653 24566666678899997654 8899999999999
Q ss_pred EEEEecCcccccccCCCcc-----cccccCC-CC-Ccc-EEEecCccccc----CCccEE
Q 019931 284 LLVLDDAHGTFVCGKNGGG-----VAEQFNC-ER-DVD-ICVGTLSKAAG----CQGGFI 331 (334)
Q Consensus 284 ~LivDeAh~~Gv~G~~G~g-----~~~~~~~-~~-~~D-iv~~SlsKa~G----~~GG~i 331 (334)
+|+.||+|.-.++-..-+. ++.+.+- .+ .+- +...|.||++- ..|||.
T Consensus 250 ~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 250 VLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred EEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 9999999998887542111 1112221 12 221 34567799983 367874
No 374
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00017 Score=69.48 Aligned_cols=135 Identities=18% Similarity=0.188 Sum_probs=89.0
Q ss_pred EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCC---CchhhHHHHHHhhhcCCcEEEEeeCC-------C
Q 019931 169 LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDAL---NHASIIDGIRIAERTKMVEVFVYKHC-------D 238 (334)
Q Consensus 169 lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~---~H~s~~~g~~ls~~~~g~~v~~~~~~-------D 238 (334)
+=+.+|+-|+-.+-.-+.+. .++..|....+ +|..+.. .+ |.++..|+.- |
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~------------~~~~~vwis~PtW~NH~~If~---~a----Gl~v~~Y~Yyd~~~~~~d 158 (396)
T COG1448 98 VQTLGGTGALRVAADFLARF------------FPDATVWISDPTWPNHKAIFE---AA----GLEVETYPYYDAETKGLD 158 (396)
T ss_pred eecCCcchHHHHHHHHHHHh------------CCCceEEeCCCCcHhHHHHHH---hc----CCceeeeecccccccccc
Confidence 34478888877776655543 12344554444 4544432 23 7788777742 6
Q ss_pred HHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCC-----
Q 019931 239 MSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNC----- 309 (334)
Q Consensus 239 ~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~----- 309 (334)
.+.+-..|++.+.+..+++=.+.+||+|.-.. +++|.++.++.|.+-++|-||-. |+ .|+- +.+++
T Consensus 159 f~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQG--F~---~GleeDa~~lR~~a~ 233 (396)
T COG1448 159 FDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQG--FA---DGLEEDAYALRLFAE 233 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhh--hc---cchHHHHHHHHHHHH
Confidence 77777777766556677778889999995544 77899999999999999999873 43 2221 11111
Q ss_pred -CCCccEEEecCcccccCCc
Q 019931 310 -ERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 310 -~~~~Div~~SlsKa~G~~G 328 (334)
.+. -++..||||.||..|
T Consensus 234 ~~~~-~lva~S~SKnfgLYg 252 (396)
T COG1448 234 VGPE-LLVASSFSKNFGLYG 252 (396)
T ss_pred hCCc-EEEEehhhhhhhhhh
Confidence 233 388999999999843
No 375
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.08 E-value=0.0001 Score=69.00 Aligned_cols=172 Identities=18% Similarity=0.093 Sum_probs=96.8
Q ss_pred CCccccccCchHHHHHHHHHHHhHhCC---CcEE-EeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEc-CCCc
Q 019931 139 PRGSALICGYTNYHRLLESCLADLKKK---EDCL-LCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSD-ALNH 213 (334)
Q Consensus 139 ~~~sr~~~G~~~~~~~LE~~La~~~g~---e~al-v~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d-~~~H 213 (334)
-+.+-.-.|...+.+.|.+-+.+-+|- ++-+ ++++..+|.+-++..+..+ ...|....|+.. .+.+
T Consensus 67 ~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~---------~sdG~~k~illPLaPeY 137 (417)
T COG3977 67 LCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGR---------RSDGTEKKILLPLAPEY 137 (417)
T ss_pred HhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCc---------cCCCcceeEeeccChhh
Confidence 344445667778888888888887772 3444 4444445555555443332 011122233332 2222
Q ss_pred hhhHHHHHHhhhcCCcEEEEee-------------CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHH
Q 019931 214 ASIIDGIRIAERTKMVEVFVYK-------------HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKL 277 (334)
Q Consensus 214 ~s~~~g~~ls~~~~g~~v~~~~-------------~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~el 277 (334)
-.+.+.. +. +.-++.++ |-|.++|+-. ..+.+|++.-+.||+|.+.- +.+|.+|
T Consensus 138 iGY~d~~-l~----~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~-----e~~g~ic~SRPtNPTGNVlTdeE~~kldal 207 (417)
T COG3977 138 IGYADAG-LE----EDLFVSAKPNIELLPAGQFKYHVDFEHLHIG-----ESTGAICVSRPTNPTGNVLTDEELAKLDAL 207 (417)
T ss_pred ccccccc-cC----ccceeeccCCcccccccceeeccCHHHcccc-----cccceEEecCCCCCCCCcccHHHHHHHHHH
Confidence 2221111 11 11111121 3477766522 36889999999999998865 7778889
Q ss_pred HHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 278 RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 278 a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
|++||+.|++|.||+...= +-=+.+.-.+-.+.-|++.||||. |..| |.+++
T Consensus 208 A~~~giPliIDnAYg~PFP---~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIa 262 (417)
T COG3977 208 ARQHGIPLIIDNAYGVPFP---GIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIA 262 (417)
T ss_pred hhhcCCcEEEecccCCCCC---ceecccccccCCCCEEEEeehhhc-CCCCcceeEEEc
Confidence 9999999999999986521 111111111112234889999996 4444 66654
No 376
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.07 E-value=0.00015 Score=78.02 Aligned_cols=194 Identities=17% Similarity=0.144 Sum_probs=121.6
Q ss_pred EEEeecCccCCCCCCHHHHHHHHH---hcCCCC--ccccccCchHHHHHHHHHHHhHhCCCc--EEEeccHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAAR---HGMGPR--GSALICGYTNYHRLLESCLADLKKKED--CLLCPTGFAANMAVIV 183 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~---~g~g~~--~sr~~~G~~~~~~~LE~~La~~~g~e~--alv~~sG~~An~~ai~ 183 (334)
+.+|.+..|.+.-.+|.|.+.+.+ |=+..+ ..-...|.....-++...++++.|.+- +-++..++++..++++
T Consensus 65 ~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~ 144 (939)
T TIGR00461 65 FKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMAL 144 (939)
T ss_pred ccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHH
Confidence 446767767776667777753322 112111 122345666777889999999999874 4677777777776666
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
+.... +++.+.|+++...|+.....++-.....|.+++.+ |+++|++.+ ++..|++..++
T Consensus 145 a~~~~-----------~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~---~~~~l~~~~-----~~~~v~~q~Pn- 204 (939)
T TIGR00461 145 SFNVS-----------KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV---DCSDIKKAV-----DVFGCLLQYPA- 204 (939)
T ss_pred HHHhh-----------cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE---cHHHHhhcC-----CEEEEEEECCC-
Confidence 53211 11246788888899887766652212237777776 455555544 35666666554
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-------CccEEee
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-------QGGFIAC 333 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-------~GG~i~~ 333 (334)
..|.+.|+++|.++++++|++++++.-...+.+ ... +-+-++||+++ .+|.||. ..||+++
T Consensus 205 ~~G~ied~~~i~~~~h~~gal~~~~ad~~al~l-------l~~-Pge~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~ 272 (939)
T TIGR00461 205 TDGSILDYKQLIDALHSHKSLVSVAADLMALTL-------LTP-PGHYGADIVLG-SSQRFGVPMGYGGPHAAFFAV 272 (939)
T ss_pred CCeEEecHHHHHHHHHHcCCEEEEEechHHhCC-------cCC-HHHcCCcEEee-CCCccCCCCCCCCCceeeeee
Confidence 469999999999999999999999654332211 111 11235799965 6676664 2267765
No 377
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00019 Score=69.95 Aligned_cols=189 Identities=17% Similarity=0.136 Sum_probs=127.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHH---hcCCCC--ccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAAR---HGMGPR--GSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~---~g~g~~--~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
+.+.+|.+..|.+.-.+|.|.+-+.+ |=+..+ ..-...|..+..-++...++++.|.+ .+=++-.++++-.++
T Consensus 74 ~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm 153 (450)
T COG0403 74 KVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAM 153 (450)
T ss_pred chhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHH
Confidence 57778999999998877766644432 211111 11122343445567788899999976 345566777777776
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+++..-. +++...++++...|....+-++---+..|.++..++.+|.++|++. .. ..+..|+++.|
T Consensus 154 ~ma~r~~-----------k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP 219 (450)
T COG0403 154 LMAKRVT-----------KKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DD--GDVFGVLVQYP 219 (450)
T ss_pred HHHHHhh-----------cCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-cc--cCeEEEEEecC
Confidence 6653321 1235789999999999888877543445788999999999999987 43 36788999988
Q ss_pred CCCCC-CccCHHHHHHHHHHcCCEEEEe-cCcccccccCCCcccccccCCCCCccEEEecCc
Q 019931 262 FSMDG-DFAPMVELVKLRRKYGFLLVLD-DAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 262 ~n~~G-~~~pL~~L~ela~k~ga~LivD-eAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls 321 (334)
.. +| ...++.+|.+.+|++|+++++= |--+.+++-+- -+-++||++|+..
T Consensus 220 ~~-~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pP---------Ge~GADIvvG~~Q 271 (450)
T COG0403 220 NT-FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPP---------GEFGADIVVGSAQ 271 (450)
T ss_pred CC-CCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCc---------cccCCceEEecCc
Confidence 74 56 6777999999999999988752 23333433221 1345789998764
No 378
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.92 E-value=0.00037 Score=67.45 Aligned_cols=173 Identities=16% Similarity=0.123 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhHhCC--CcEEEeccHHHHHH-HHHH-HHhhhhhhccCCCccCCCCC-eEEEEcCCC---chhhHHHHH
Q 019931 150 NYHRLLESCLADLKKK--EDCLLCPTGFAANM-AVIV-AVGNIASLLAGDEKSFKDEK-IAIFSDALN---HASIIDGIR 221 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~--e~alv~~sG~~An~-~ai~-al~~~~~~~~~~~~~~~~~g-d~Vl~d~~~---H~s~~~g~~ 221 (334)
.-.-++++..++++|. +++++..+.+--+| -++. ++.. | +.++.+|+...+ -..++.-+. |..+. .
T Consensus 69 ~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~-G--~~~~~~PW~~~~~vKfLCPvPGYDRHFai~---E 142 (425)
T PF12897_consen 69 DGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLH-G--VPGSETPWCKEEKVKFLCPVPGYDRHFAIT---E 142 (425)
T ss_dssp S--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH-----TT-SS-GGGSS--EEEEEES--HHHHHHH---H
T ss_pred CChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhc-C--CCCCCCCchhccCceEEecCCCchHHHHHH---H
Confidence 3346788888999996 45666644333222 2222 2221 1 122345665443 344555443 33333 2
Q ss_pred HhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCC-CCCCCccCHHHHHHHH----HHcCCEEEEecCcc
Q 019931 222 IAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLF-SMDGDFAPMVELVKLR----RKYGFLLVLDDAHG 292 (334)
Q Consensus 222 ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~-n~~G~~~pL~~L~ela----~k~ga~LivDeAh~ 292 (334)
. .|.+.+.++.+ |++.+|+++.+.+ ..|.|.+-+.| ||+|.+..=+-+.+|| ...++.++.|+||+
T Consensus 143 ~----~Giemi~VpM~~dGPDmD~Ve~LV~~D~-svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 143 H----FGIEMIPVPMTEDGPDMDMVEELVAEDP-SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp H----CT-EEEEEEEETTEE-HHHHHHHTHTST-TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred h----hCcEEEecCCCCCCCCHHHHHHHHhcCC-ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 2 28888888864 9999999997533 56766655555 6899887744444444 36799999999999
Q ss_pred cccc-cCCCcc-------cccccCCCCCccEEEecCcc-cccCCc-cEEeeC
Q 019931 293 TFVC-GKNGGG-------VAEQFNCERDVDICVGTLSK-AAGCQG-GFIACR 334 (334)
Q Consensus 293 ~Gv~-G~~G~g-------~~~~~~~~~~~Div~~SlsK-a~G~~G-G~i~~~ 334 (334)
+--+ +..-.- .++..| .|+.-++..|+|| +|.+.| +|+++|
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS 268 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAAS 268 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-
T ss_pred EeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecC
Confidence 7655 332211 112222 2555588999999 455555 677764
No 379
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.78 E-value=0.00016 Score=70.92 Aligned_cols=144 Identities=12% Similarity=0.082 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHhHhCCC--c-EE-EeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hH-HHHHH
Q 019931 149 TNYHRLLESCLADLKKKE--D-CL-LCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-II-DGIRI 222 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e--~-al-v~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~-~g~~l 222 (334)
..+..++++.|.++++.+ + ++ +..||+.+..+++..++.+ +++.|+... ..+. .. +.++.
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~-------------~g~~vLv~g-~FG~r~~~eia~~ 103 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC-------------RGVDVLAWE-SFGKGWVTDVTKQ 103 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC-------------CCCeEEEEC-HHHHHHHHHHHHh
Confidence 367788999999999853 3 44 4589999999999988742 255566543 1111 12 22222
Q ss_pred hhhcCCc-EEEEe--eCC---CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 223 AERTKMV-EVFVY--KHC---DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 223 s~~~~g~-~v~~~--~~~---D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
. +. ++..+ +.. |+++++. +..+.++ +.=-.+|...|++++...+ +++++|||.+-++|..
T Consensus 104 ~----g~~~v~~l~~~~g~~~~~~~ve~-------~~~v~~v-hnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~ 169 (374)
T TIGR01365 104 L----KLPDVRVLEAEYGKLPDLKKVDF-------KNDVVFT-WNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ 169 (374)
T ss_pred c----CCCCcEEEcCCCCCCCCHHHcCC-------CCCEEEe-cCCCchheecccccccccc--CCCcEEEEccchhcCC
Confidence 2 44 23333 332 6666652 1123332 2223468899987655322 5899999999887522
Q ss_pred cCCCcccccccCCCCCccEEEecCcccccCCccE
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGF 330 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~ 330 (334)
.+.+. ++|+++.+--|+||+.+|.
T Consensus 170 ---------~l~~d-~iDv~~tgsQK~L~~ppGl 193 (374)
T TIGR01365 170 ---------DLDYH-KLDVVTFSWQKVLGGEGAH 193 (374)
T ss_pred ---------CCChh-HCcEEEEechhccCCCCce
Confidence 22333 4899999999999987765
No 380
>PLN02452 phosphoserine transaminase
Probab=97.76 E-value=0.00059 Score=66.65 Aligned_cols=184 Identities=14% Similarity=0.071 Sum_probs=102.7
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHh-----cCCC----CccccccCchHHHHHHHHHHHhHhCCC---cEEEe-ccHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARH-----GMGP----RGSALICGYTNYHRLLESCLADLKKKE---DCLLC-PTGFA 176 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~-----g~g~----~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~-~sG~~ 176 (334)
+.+||+..- .- -+++|++++++- +.|. .++|-- -...+++++++.|.++++.+ .++++ .||+.
T Consensus 7 ~~~~f~pGP-~~--lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~-~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 7 RVFNFSAGP-AT--LPANVLAKAQAELYNWEGSGMSVMEMSHRGK-EFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred ceEeeeCCC-CC--CCHHHHHHHHHHHhcccccCccccccCCCch-HHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 355776543 22 378898876542 2221 112211 11367789999999999964 35555 78899
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCe-EEEEcCCCchh-hHHHHHHhhhcCCcEEEEe--eCCC---HHHHHHHHhcC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKI-AIFSDALNHAS-IIDGIRIAERTKMVEVFVY--KHCD---MSHLKTLLSCC 249 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd-~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~--~~~D---~~~Le~~l~~~ 249 (334)
+..+++..+..+ ++ +.+........ ..+-++.. +...+.. +..+ +.++++ ++.
T Consensus 83 ~~ea~~~nl~~~--------------~~~~l~~~~G~fg~r~~~~a~~~----g~~~~~~~~~~~~~~~~~~~~~-~~~- 142 (365)
T PLN02452 83 QFAAIPLNLCKP--------------GDKADFVVTGSWSKKAAKEAKKY----CKTNVIASGKDEKYTKIPSVSE-WEL- 142 (365)
T ss_pred HHHHHHHhcCCC--------------CCeEEEEECCHHHHHHHHHHHHh----CCCcEEEecCCCCCCCCCChHH-cCC-
Confidence 999998887754 33 33333222211 22222221 3322222 1221 333443 222
Q ss_pred CCCcEEEEEcCCCCCCCC-ccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 250 TMRKKVVVTDSLFSMDGD-FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~-~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
.++.+.|.+.+.--.+|. +.|++++. ++++++|.++++|.. ..++. +.++...|..|.+|+.|
T Consensus 143 ~~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~---------pidv~-~~~v~~~saqK~lGP~G 206 (365)
T PLN02452 143 TPDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSK---------PVDVS-KYGVIYAGAQKNVGPSG 206 (365)
T ss_pred CCCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCc---------ccCHH-HcCEEEEecccccCCCC
Confidence 224566665555555787 47787764 389999999997632 12222 23455679999999887
Q ss_pred -cEEee
Q 019931 329 -GFIAC 333 (334)
Q Consensus 329 -G~i~~ 333 (334)
|+++.
T Consensus 207 l~~v~v 212 (365)
T PLN02452 207 VTIVII 212 (365)
T ss_pred eEEEEE
Confidence 66554
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.62 E-value=0.001 Score=65.44 Aligned_cols=163 Identities=17% Similarity=0.130 Sum_probs=102.4
Q ss_pred HHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC---------------CcEEEeccHHHHHHHHHHHHhhhh-
Q 019931 126 PTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK---------------EDCLLCPTGFAANMAVIVAVGNIA- 189 (334)
Q Consensus 126 p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---------------e~alv~~sG~~An~~ai~al~~~~- 189 (334)
|.+..-+..-+-|.-|-.+.+ +|...+||.-+.+|++. .-.+++.|.+++++.++.+....-
T Consensus 87 ~siladmLs~~i~~vGFtW~s--sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i 164 (511)
T KOG0628|consen 87 PSILADMLSGGIGCVGFTWAS--SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKI 164 (511)
T ss_pred HHHHHHHHhcccccccceeec--CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHH
Confidence 433333333344444444554 57788999877777641 235888999999988887643210
Q ss_pred hhccC----CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC-CC-cEEEEE
Q 019931 190 SLLAG----DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT-MR-KKVVVT 258 (334)
Q Consensus 190 ~~~~~----~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~-~~-~~lVv~ 258 (334)
.-+.. .+.+.....-++++....|.|+-.++.++ +.+++.++.+ +.+.|++++++.. .+ .-++++
T Consensus 165 ~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~----~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~ 240 (511)
T KOG0628|consen 165 EEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIA----GVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVC 240 (511)
T ss_pred HHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhc----ceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 00110 11111223456778888999999998887 7777776643 6788888887632 12 122222
Q ss_pred cCCCCCCCC--ccCHHHHHHHHHHcCCEEEEecCccccc
Q 019931 259 DSLFSMDGD--FAPMVELVKLRRKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 259 e~v~n~~G~--~~pL~~L~ela~k~ga~LivDeAh~~Gv 295 (334)
. .++.+|. .-+|.+|..+|+++|+||.||.||+...
T Consensus 241 a-t~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa 278 (511)
T KOG0628|consen 241 A-TLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSA 278 (511)
T ss_pred E-eecCccccccccHHHhcchhhhcCEEEEeehhhcccc
Confidence 2 2233343 4469999999999999999999999543
No 382
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.57 E-value=0.0012 Score=67.39 Aligned_cols=161 Identities=18% Similarity=0.159 Sum_probs=111.3
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHH---HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHH
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAA---NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGI 220 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~A---n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~ 220 (334)
..|+..+..+||+.|+++.|.+..-+. +||... -..+|++.... .++ +-..+.+..-..|+.-....
T Consensus 577 aqGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~-----kge----~hRnvClIPvSAHGTNPASA 647 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLES-----KGE----GHRNVCLIPVSAHGTNPASA 647 (1001)
T ss_pred HhhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHh-----ccC----CcceeEEEeecccCCChhhH
Confidence 457788889999999999999987666 788663 44455553321 111 11346667778898877776
Q ss_pred HHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC-HHHHHHHHHHcCCEEEEecCcccc
Q 019931 221 RIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP-MVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 221 ~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p-L~~L~ela~k~ga~LivDeAh~~G 294 (334)
..+ |-+++++... |+.+|+.+.++++.+-..+.+.-++- .|...+ ++++.++.++||--++.|.|..--
T Consensus 648 ~Ma----gmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNA 722 (1001)
T KOG2040|consen 648 AMA----GMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNA 722 (1001)
T ss_pred Hhc----CCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccc
Confidence 777 7888877642 89999999988766666776665554 366654 999999999999999999876422
Q ss_pred cccCCCcccccccCCCCCccEEEecCcccccC
Q 019931 295 VCGKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 295 v~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
-+| ++. .| .-+.|+.---|+|+|..
T Consensus 723 qVG-----lc~-pG-d~GaDV~HLNLHKTFcI 747 (1001)
T KOG2040|consen 723 QVG-----LCR-PG-DIGADVCHLNLHKTFCI 747 (1001)
T ss_pred eec-----ccC-Cc-cccccceeecccceeee
Confidence 122 221 11 12356776788999964
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.48 E-value=0.0035 Score=67.55 Aligned_cols=194 Identities=16% Similarity=0.139 Sum_probs=115.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHH-HH--hcCCCC--ccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAA-AR--HGMGPR--GSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~-~~--~g~g~~--~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
+.+.+|.+..|.+.-.++.|.+.+ .. |=+..+ ..-...|.....-++...++++.|.+ .+=++-.++++-.++
T Consensus 78 ~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~ 157 (954)
T PRK12566 78 QVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAM 157 (954)
T ss_pred CCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHH
Confidence 345567776666665555553433 21 212211 11223555667788999999999987 445666777766666
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+++.... +++...|+++...|+..+.-++--....|.+++. +++++++.+ ++..|++..|
T Consensus 158 ~ma~~~~-----------~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~---~~~~v~vq~P 217 (954)
T PRK12566 158 ALAKRVA-----------KSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAH---AVFGALLQYP 217 (954)
T ss_pred HHHHHHh-----------hcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCC---CEEEEEEECC
Confidence 6544211 0123568888888987766554322223566654 344554432 5777877766
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEe-cCcccccccCCCcccccccCCCCCccEEEecCcccccC---C----ccEEee
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLD-DAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC---Q----GGFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivD-eAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~---~----GG~i~~ 333 (334)
. ..|.+.++++|.+++++.|+++++- |--+.+++- .. -+-++||++| -++.||. . .||+++
T Consensus 218 ~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~--------~P-ge~GADI~vG-~~Q~fGvp~~~GGP~ag~~a~ 286 (954)
T PRK12566 218 D-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLT--------PP-GELGADVVLG-STQRFGVPMGYGGPHAAYFAC 286 (954)
T ss_pred C-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCC--------Ch-hhcCCcEEee-CCCcCCCCCCCCCCCeeeeee
Confidence 5 4699999999999999999986632 112222221 11 1346799977 4565553 2 267765
No 384
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=96.81 E-value=0.025 Score=55.99 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhHhCCCcE---EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 150 NYHRLLESCLADLKKKEDC---LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~a---lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
..-.+.=+-++.+++.+.. ..+++|+++..++.+.-...- .. .++.+ ...|++....|.++-...+.-
T Consensus 120 ~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r---~~-~k~I~--~p~iv~~~~v~~a~eK~a~yf--- 190 (491)
T KOG1383|consen 120 KLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRR---KA-QKGID--KPNIVTPQNVHAAFEKAARYF--- 190 (491)
T ss_pred HHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHH---Hh-ccCCC--CccccchHHHHHHHHHHHhhE---
Confidence 3334444556667775432 455677888555554422210 00 01111 233666667777776665544
Q ss_pred CCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH-cCCEEEEecCcccccc
Q 019931 227 KMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK-YGFLLVLDDAHGTFVC 296 (334)
Q Consensus 227 ~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k-~ga~LivDeAh~~Gv~ 296 (334)
+.++..++.. |+..+.+.+.+ +|+.|+.+.++-|.|.+-|+++|.++.-+ +++.+.+|.+-+..+.
T Consensus 191 -~v~l~~V~~~~~~~~~D~~k~~~~i~e---Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 191 -EVELREVPLDEGDYRVDPGKVVRMIDE---NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred -EEEEEeeeccccceEecHHHHHHHhcc---ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccc
Confidence 4555555532 77777777765 89999999999999999999999999998 9999999998875444
No 385
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=96.69 E-value=0.021 Score=55.81 Aligned_cols=147 Identities=16% Similarity=0.062 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHhHhCCC---cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCe-EE-EEcCCCchhhHHHHHH
Q 019931 149 TNYHRLLESCLADLKKKE---DCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKI-AI-FSDALNHASIIDGIRI 222 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e---~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd-~V-l~d~~~H~s~~~g~~l 222 (334)
..++.++++.|.++++.+ +++++ .||+.+..++..-++.+ ++ ++ +... .+.+- .....
T Consensus 48 ~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~--------------g~~~~~~~~t-G~fg~-r~~~e 111 (364)
T PRK12462 48 SSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRP--------------GAAAPEYVTT-GYWSR-KAIGE 111 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCC--------------CCcEEEEEeC-CHHHH-HHHHH
Confidence 367789999999999963 25555 55788888888877754 44 33 2322 22221 11222
Q ss_pred hhhcCCcEEEEee-CCCHHH---HHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 223 AERTKMVEVFVYK-HCDMSH---LKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 223 s~~~~g~~v~~~~-~~D~~~---Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
+++-...++.... ..++.. .++ ++. .++.+.|.+.+.--.+|...| ++.+.+++++|+|.+-+++. +
T Consensus 112 a~~~g~v~~~~~~~~~~~~~~p~~~~-~~~-~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s--~ 182 (364)
T PRK12462 112 ASRVAAMRVVWDGAASGYRTLPSLAE-LDW-DARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS--R 182 (364)
T ss_pred HHhcCCceEecCcCCCCCCcCCCHHH-hcc-CCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhC--C
Confidence 2211122222110 111111 122 222 124555655544445687765 33334799999999887642 1
Q ss_pred CCcccccccCCCCCccEEEecCcccccCCc
Q 019931 299 NGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 299 ~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
.+.+. +.|+++.+.-|++|+.|
T Consensus 183 -------pid~~-~~dvi~agsQKnlgP~G 204 (364)
T PRK12462 183 -------PFDVE-AYGMVYAHAQKNLGPAG 204 (364)
T ss_pred -------CCChH-HccEEEeeccccCCCCc
Confidence 12332 34899999999999877
No 386
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=96.66 E-value=0.046 Score=51.76 Aligned_cols=175 Identities=17% Similarity=0.188 Sum_probs=97.8
Q ss_pred ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCc
Q 019931 118 DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEK 197 (334)
Q Consensus 118 ~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~ 197 (334)
+||.+.++|.+.+++.+.-.|... + .-.|++. + .+=.-||+-|+..+-.-+..- +
T Consensus 69 EYLpi~Gl~~F~~~A~el~lg~~s--------~--a~kE~Rv---~----~vQslsGTGAl~~~A~Fl~~~---~----- 123 (410)
T KOG1412|consen 69 EYLPILGLPTFTKAATELLLGADS--------P--AIKEDRV---F----GVQSLSGTGALRIAADFLATF---Y----- 123 (410)
T ss_pred hhccccCchhhhhhhHHHhcCCCc--------h--hhhhccc---c----ceeeccccchhhhhHHHHHHh---c-----
Confidence 799999999888877665444321 1 1122221 1 123357776766655444331 1
Q ss_pred cCCCCCeEEEEcCC---CchhhHHHHHHhhhcCC-cEEEEeeC-------CCHHHHHHHHhcCCCCcEEEEEcCCCCCCC
Q 019931 198 SFKDEKIAIFSDAL---NHASIIDGIRIAERTKM-VEVFVYKH-------CDMSHLKTLLSCCTMRKKVVVTDSLFSMDG 266 (334)
Q Consensus 198 ~~~~~gd~Vl~d~~---~H~s~~~g~~ls~~~~g-~~v~~~~~-------~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G 266 (334)
....|+...+ +|..+. .-+ | .++..|+. -|++-+-..|+..+.+..+|+-...+||+|
T Consensus 124 ----~~~~VY~SnPTW~nH~~if---~~a----Gf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTG 192 (410)
T KOG1412|consen 124 ----NKNTVYVSNPTWENHHAIF---EKA----GFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTG 192 (410)
T ss_pred ----ccceeEecCCchhHHHHHH---HHc----CCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCC
Confidence 1334554444 333222 111 3 23444432 266666666665443444555556699999
Q ss_pred CccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCc-cEEEecCcccccCCc
Q 019931 267 DFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDV-DICVGTLSKAAGCQG 328 (334)
Q Consensus 267 ~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~-Div~~SlsKa~G~~G 328 (334)
.-+- ...|+++-++.+.+.+.|-|+....-|.-.+-. +-.+.+..+. =+++-||+|-||..+
T Consensus 193 mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYn 259 (410)
T KOG1412|consen 193 MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYN 259 (410)
T ss_pred CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccccc
Confidence 3322 667888888999999999998854334322221 1123333333 278899999999854
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.45 E-value=0.031 Score=53.93 Aligned_cols=128 Identities=16% Similarity=0.104 Sum_probs=83.4
Q ss_pred HHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEE
Q 019931 153 RLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVF 232 (334)
Q Consensus 153 ~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~ 232 (334)
..|+..+.+.+|.+..+-+.-|-.|-...+..+.+++.. .+|...+.....|.-+..+-.... |+.++
T Consensus 82 ~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~---------~pg~~~~~~sN~~FdTTr~h~~~n---g~~~~ 149 (471)
T COG3033 82 YALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQ---------EPGSKMVAFSNYHFDTTRGHIQIN---GATPR 149 (471)
T ss_pred HHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccc---------cCCccccccccceecchhHHHHhc---CCccc
Confidence 568888899999999999988887777777766665321 123333333445655554443321 33322
Q ss_pred Ee------------eC---CCHHHHHHHHhcCCCC-cE-EEEEcCCCCCCCCc---cCHHHHHHHHHHcCCEEEEecCcc
Q 019931 233 VY------------KH---CDMSHLKTLLSCCTMR-KK-VVVTDSLFSMDGDF---APMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 233 ~~------------~~---~D~~~Le~~l~~~~~~-~~-lVv~e~v~n~~G~~---~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
-+ +. -|++.|+++|.+.... .. ++.+-+.++..|.. ..+++..+||++|++.++.|.+.-
T Consensus 150 n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rf 229 (471)
T COG3033 150 NVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARF 229 (471)
T ss_pred cccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhh
Confidence 11 11 2899999999886432 33 44455566677754 457889999999999999998753
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=94.10 E-value=0.12 Score=49.67 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=64.1
Q ss_pred CcEEEEeeCC-------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCcc---CHHHHHHHHHHcCCEEEEecCccccccc
Q 019931 228 MVEVFVYKHC-------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFA---PMVELVKLRRKYGFLLVLDDAHGTFVCG 297 (334)
Q Consensus 228 g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~---pL~~L~ela~k~ga~LivDeAh~~Gv~G 297 (334)
+..+..|+.- |++-+-+.+.+.+.+-.+++=...+||+|.-+ .+++|.++-++.+.+-++|.|+....-|
T Consensus 167 g~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG 246 (427)
T KOG1411|consen 167 GLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASG 246 (427)
T ss_pred CcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccC
Confidence 5555555532 66655555555555667777888999999432 3778999999999999999999854333
Q ss_pred CCCccc--ccccCCCCCcc-EEEecCcccccCCc
Q 019931 298 KNGGGV--AEQFNCERDVD-ICVGTLSKAAGCQG 328 (334)
Q Consensus 298 ~~G~g~--~~~~~~~~~~D-iv~~SlsKa~G~~G 328 (334)
.--+-. ..+| +..+.. ++.-|++|-+|..|
T Consensus 247 ~~d~DA~avR~F-~~~g~~~~laQSyAKNMGLYg 279 (427)
T KOG1411|consen 247 DLDKDAQAVRLF-VEDGHEILLAQSYAKNMGLYG 279 (427)
T ss_pred CchhhHHHHHHH-HHcCCceEeehhhhhhcchhh
Confidence 211110 1111 122222 67789999999865
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.07 E-value=0.33 Score=41.55 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=41.6
Q ss_pred ccCchHHHHHHHHHHHhHhC------CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCch
Q 019931 145 ICGYTNYHRLLESCLADLKK------KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA 214 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g------~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~ 214 (334)
..|...+.+++.+.+.+.+| .++++++++++.|+..++.+++.+ ||.|++..+++.
T Consensus 91 ~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dp--------------GD~VlVp~P~Y~ 152 (153)
T PLN02994 91 YHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADP--------------GDAFLVPTPYYA 152 (153)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCC--------------CCEEEEeCCCCC
Confidence 45666666777777766655 246788888899999999998875 788888777653
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=93.92 E-value=0.66 Score=44.15 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=112.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHH----HHHh------cCCCCccccccCchHHHHHHHHHHHhHhCCC-cEEEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKA----AARH------GMGPRGSALICGYTNYHRLLESCLADLKKKE-DCLLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a----~~~~------g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e-~alv~~sG~~A 177 (334)
+..+-||+|. |||. +...++. +.+| |--.+--+++++..+. -..++.+.|+. ..+...+.-++
T Consensus 66 ~~~iYlcGNS-LGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~i----l~l~~~iVGA~e~EvavmNsLTv 139 (465)
T KOG3846|consen 66 KPVIYLCGNS-LGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPI----LPLLAPIVGAQENEVAVMNSLTV 139 (465)
T ss_pred CCeEEEeccc-cccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecchhh----hhhhhhhccCCchhhhhHhhhhh
Confidence 6788899998 8996 3333332 2333 2223445666665333 34566777853 33444444556
Q ss_pred HHHHHHH-HhhhhhhccCCCccCCCCCeEEEEcC----CCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHH
Q 019931 178 NMAVIVA-VGNIASLLAGDEKSFKDEKIAIFSDA----LNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLL 246 (334)
Q Consensus 178 n~~ai~a-l~~~~~~~~~~~~~~~~~gd~Vl~d~----~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l 246 (334)
|..++.. +.+| +.+.-.|+... ..|..+...+++-.....-..+-+.. .-.+++-..|
T Consensus 140 Nlh~Ll~sFyKP-----------TekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~I 208 (465)
T KOG3846|consen 140 NLHSLLISFYKP-----------TEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTI 208 (465)
T ss_pred HHHHHHHHhcCC-----------cchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHH
Confidence 6665543 3332 11233455443 35555666666542110001111111 1345555566
Q ss_pred hcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc
Q 019931 247 SCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 247 ~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
+......++|++.++.--+|..-++.+|...-+..|.++=.|=||++|-+- + +. -..++|+.+=+--|.+.
T Consensus 209 EkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVp-----L--~L-HdWgVDFACWCSYKYln 279 (465)
T KOG3846|consen 209 EKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVP-----L--QL-HDWGVDFACWCSYKYLN 279 (465)
T ss_pred HhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCc-----e--EE-eecCCceEEEeeecccc
Confidence 655556788999999999999999999997777789999999999976321 1 00 12567888877788873
No 391
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=92.31 E-value=0.25 Score=47.59 Aligned_cols=147 Identities=18% Similarity=0.115 Sum_probs=70.3
Q ss_pred HHHHHHHHhHh---C----CCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 153 RLLESCLADLK---K----KEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 153 ~~LE~~La~~~---g----~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
.+||+.|.++. | ..+-++|.+| ++-.++++-||.... .+. .+--.|++..+++.+......+..
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~---~~~-----~~p~~VVa~aPYY~~Y~~qt~~f~ 117 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNA---SPS-----SSPASVVAAAPYYSSYPEQTDFFD 117 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT----TT-----SSSEEEEE-SS--CHHHHHCCCT-
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCC---CCC-----CCCceeEecCCCccchHHHHHhcc
Confidence 56777777764 3 2456777665 566777777765420 011 123457777788776654433221
Q ss_pred hcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc
Q 019931 225 RTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA 304 (334)
Q Consensus 225 ~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~ 304 (334)
.....+. .|..... ......+-+=++.+|+||||.+- + .+.+.-+..+|.|-||-..-+- .+.
T Consensus 118 ----s~~y~w~-Gda~~~~---~~~~~~~~IElVTSPNNPDG~lr--~---~V~~g~~~k~I~D~AYYWPhyT----pI~ 180 (363)
T PF04864_consen 118 ----SRLYKWA-GDASNFK---NSDNPSPYIELVTSPNNPDGQLR--E---AVLNGSSGKVIHDLAYYWPHYT----PIT 180 (363)
T ss_dssp ----BTTEEEE-EECCCGT---T-S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-------
T ss_pred ----ccCcccc-ccHHhhc---cCCCCCCeEEEEeCCCCCccccc--c---hhcCCCCcceeeeeeeeccccc----ccC
Confidence 1111221 1211111 11112345558889999999651 1 1235556778999998754321 111
Q ss_pred cccCCCCCccEEEecCcccccCCc
Q 019931 305 EQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
. ..+-||.+.|+||.=|-.|
T Consensus 181 ---~-~aD~DiMLFT~SK~TGHAG 200 (363)
T PF04864_consen 181 ---A-PADHDIMLFTLSKLTGHAG 200 (363)
T ss_dssp ---S--B--SEEEEEHHHHCS-GG
T ss_pred ---C-CCCCceEEEEEecccCccc
Confidence 1 1234899999999987665
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=91.70 E-value=2.5 Score=39.56 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=89.8
Q ss_pred HHHHHHHHhHhC---CCcEEEe--ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 153 RLLESCLADLKK---KEDCLLC--PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 153 ~~LE~~La~~~g---~e~alv~--~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
.++...+..+.| ...|++. .+|++-. ..+.++..+. .+-..|+-.+....|-...+.-+
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmsls-lc~~s~r~kr-----------pkakyiiw~ridqks~~ksi~~a---- 123 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLS-LCFLSLRHKR-----------PKAKYIIWLRIDQKSCFKSIIHA---- 123 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHH-HHHHHHhhcC-----------CcccEEEEEecchHHHHHHHHhc----
Confidence 455555555666 3556666 5665433 3333344320 12344555555556655555444
Q ss_pred CcEEEEeeC--------CCHHHHHHHHhcCCCCcEEEE--EcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccccc
Q 019931 228 MVEVFVYKH--------CDMSHLKTLLSCCTMRKKVVV--TDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCG 297 (334)
Q Consensus 228 g~~v~~~~~--------~D~~~Le~~l~~~~~~~~lVv--~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G 297 (334)
|.+.+.+.. .|++.+++.+++..+...+.+ +.+.|.| -....+++|..+|..|++.-+|..||+...-
T Consensus 124 gfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfap-r~pd~leaiaaica~~diphivnnayglqse- 201 (432)
T KOG3843|consen 124 GFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAP-RSPDNLEAIAAICAAHDIPHIVNNAYGLQSE- 201 (432)
T ss_pred CCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCC-CCCchHHHHHHHHHccCchhhhccccccchH-
Confidence 555555442 388999999988654434333 3333433 1122399999999999999999999875310
Q ss_pred CCCcccccccCCCCCccEEEecCccccc-CCccEEe
Q 019931 298 KNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFIA 332 (334)
Q Consensus 298 ~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i~ 332 (334)
+.-+-..... --.++|-++-||-|.|- +.||.|.
T Consensus 202 e~i~~iaa~~-~~grida~vqsldknf~vpvggaii 236 (432)
T KOG3843|consen 202 ECIHKIAAAA-ECGRIDAFVQSLDKNFMVPVGGAII 236 (432)
T ss_pred HHHHHHHHHh-hhccHHHHHHHhhhcceeecchhHh
Confidence 0000011000 01356777789999984 3666543
No 393
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=78.21 E-value=27 Score=34.14 Aligned_cols=57 Identities=7% Similarity=0.114 Sum_probs=40.4
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEc-CCCC---CCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTD-SLFS---MDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e-~v~n---~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
++++++.+++.. ..+..+++++ ++.+ +.-...+|..|..+.+++++.+++|-.|+.|
T Consensus 237 t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 237 TIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 666666555432 2356788888 5544 1123358999999999999999999999976
No 394
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=72.86 E-value=50 Score=30.64 Aligned_cols=43 Identities=12% Similarity=0.325 Sum_probs=33.5
Q ss_pred CcEEEEEc-CCCCCC---CCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 252 RKKVVVTD-SLFSMD---GDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 252 ~~~lVv~e-~v~n~~---G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
+..+++++ +++... -...+|..|..+.++++..+|+|-.|+.|
T Consensus 150 n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 150 KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 56788888 554322 12677888999998899999999999977
No 395
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=72.13 E-value=41 Score=32.81 Aligned_cols=57 Identities=14% Similarity=0.184 Sum_probs=40.4
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEcC---CC--CCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTDS---LF--SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e~---v~--n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
+++++...++.. ..+..+++++. .| ...-...+|..|..+.+.+++.+|+|-+|+.|
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G 283 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTG 283 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCC
Confidence 566655554432 23567888876 22 22235678999999988889999999999987
No 396
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=61.77 E-value=9.1 Score=40.11 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=35.7
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA 304 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~ 304 (334)
+|.+.-|...+++++++-|++.|+-+|+|=+++- +++.|.++.
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~H--F~~d~~~L~ 247 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH--FPPDGNYLA 247 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc--CCCCcchhh
Confidence 4566778899999999999999999999999875 666666554
No 397
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=59.85 E-value=63 Score=34.23 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=66.3
Q ss_pred HHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEE
Q 019931 155 LESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVF 232 (334)
Q Consensus 155 LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~ 232 (334)
...-++++.|.+ .+-+.--|++|-.+...+... .++..+++|...|.-.+..++--....+.+
T Consensus 168 yQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~-------------~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-- 232 (1001)
T KOG2040|consen 168 YQTMITDLTGLPMANASLLDEGTAAAEAMALCNRI-------------NKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-- 232 (1001)
T ss_pred hHHhhhhccCCcccchhhhccchhHHHHHHHHHhh-------------cccceEEecCCCCcchhhhhhcccccccee--
Confidence 334556677743 455666677766665543221 123448889999998877665322112333
Q ss_pred EeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 233 VYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 233 ~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
+...|+.....-. +....|++.-+. -.|.+-|+.+|++++++.|.++++
T Consensus 233 -v~~~~~~~~~~s~----~~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 233 -VVVSDIKEADYSS----KDVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVM 281 (1001)
T ss_pred -EEecCHHHhhccc----cceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEE
Confidence 2223443322211 244556666543 469999999999999999987664
No 398
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=54.08 E-value=1.6e+02 Score=29.12 Aligned_cols=113 Identities=12% Similarity=0.140 Sum_probs=64.9
Q ss_pred cccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCC-CchhhHHH
Q 019931 142 SALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDAL-NHASIIDG 219 (334)
Q Consensus 142 sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~-~H~s~~~g 219 (334)
..++.|... ..+|..++.+.. .+++|+..+|.=..--+= +++. -..+++..+.. ....-.+.
T Consensus 58 ~~ll~gsGt--~amEAav~sl~~pgdkVLv~~nG~FG~R~~~--ia~~------------~g~~v~~~~~~wg~~v~p~~ 121 (383)
T COG0075 58 VVLLSGSGT--LAMEAAVASLVEPGDKVLVVVNGKFGERFAE--IAER------------YGAEVVVLEVEWGEAVDPEE 121 (383)
T ss_pred EEEEcCCcH--HHHHHHHHhccCCCCeEEEEeCChHHHHHHH--HHHH------------hCCceEEEeCCCCCCCCHHH
Confidence 344544433 468999999987 467888877742221111 1111 01233443332 22222222
Q ss_pred HHH-hhhcCCcEEEEeeCC--------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 220 IRI-AERTKMVEVFVYKHC--------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 220 ~~l-s~~~~g~~v~~~~~~--------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
+.- ......++.+.+-|+ +++.+-++++++ -.++++|++.++.|...++++
T Consensus 122 v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~---g~l~iVDaVsS~Gg~~~~vd~ 181 (383)
T COG0075 122 VEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH---GALLIVDAVSSLGGEPLKVDE 181 (383)
T ss_pred HHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc---CCEEEEEecccCCCcccchhh
Confidence 221 112235667777764 788888888863 578999999999888777765
No 399
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=53.54 E-value=57 Score=29.80 Aligned_cols=128 Identities=11% Similarity=0.094 Sum_probs=67.7
Q ss_pred ccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCch---hhHHHHH
Q 019931 145 ICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHA---SIIDGIR 221 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~---s~~~g~~ 221 (334)
-.|-+.....+...++.-.| ..+++|+.-......+.+.++....+ +-..+....+... -+.....
T Consensus 29 g~GKT~~~l~ia~~~a~~~~-~~vly~SlEm~~~~l~~R~la~~s~v----------~~~~i~~g~l~~~e~~~~~~~~~ 97 (259)
T PF03796_consen 29 GVGKTAFALQIALNAALNGG-YPVLYFSLEMSEEELAARLLARLSGV----------PYNKIRSGDLSDEEFERLQAAAE 97 (259)
T ss_dssp TSSHHHHHHHHHHHHHHTTS-SEEEEEESSS-HHHHHHHHHHHHHTS----------THHHHHCCGCHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHhhcc----------hhhhhhccccCHHHHHHHHHHHH
Confidence 34445555566665554333 56788887777666666655543110 0000111111111 1111111
Q ss_pred -HhhhcCCcEEEEeeC--CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCc--cC--------HHHHHHHHHHcCCEE
Q 019931 222 -IAERTKMVEVFVYKH--CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDF--AP--------MVELVKLRRKYGFLL 285 (334)
Q Consensus 222 -ls~~~~g~~v~~~~~--~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~--~p--------L~~L~ela~k~ga~L 285 (334)
+. ...++.++. .++++++..++... .+..+|++|.+.-+.... .+ .++|.++|+++++.+
T Consensus 98 ~l~----~~~l~i~~~~~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~v 173 (259)
T PF03796_consen 98 KLS----DLPLYIEDTPSLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPV 173 (259)
T ss_dssp HHH----TSEEEEEESSS-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHh----hCcEEEECCCCCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeE
Confidence 22 334444443 37788887776431 367899999887654321 11 457899999999998
Q ss_pred EE
Q 019931 286 VL 287 (334)
Q Consensus 286 iv 287 (334)
|+
T Consensus 174 i~ 175 (259)
T PF03796_consen 174 IA 175 (259)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 400
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=51.58 E-value=42 Score=33.57 Aligned_cols=57 Identities=16% Similarity=0.394 Sum_probs=40.9
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCC---C-----CCccCH----HHHHHHHHHcCCEEEE
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSM---D-----GDFAPM----VELVKLRRKYGFLLVL 287 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~---~-----G~~~pL----~~L~ela~k~ga~Liv 287 (334)
.++..+...|++++.+.+++ .++.++++|++..+ . |.+.-+ .+|.++||++|+.+++
T Consensus 147 ~~l~l~aEt~~e~I~~~l~~--~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 147 NNLYLLAETNLEDIIAELEQ--EKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred cceEEehhcCHHHHHHHHHh--cCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 45566777899999999887 36788888877643 3 333333 4688999999976653
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=50.42 E-value=1.7e+02 Score=25.85 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=35.2
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
|++++..+.+|.+.|.++++.. ..++++-+..+ .....-...|.+.|++.|+-.++
T Consensus 44 g~~vv~~d~~~~~~l~~al~g~---d~v~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 44 GAEVVEADYDDPESLVAALKGV---DAVFSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp TTEEEES-TT-HHHHHHHHTTC---SEEEEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred cceEeecccCCHHHHHHHHcCC---ceEEeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 8888888888999999999742 23444333332 22233356789999999976665
No 402
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=49.75 E-value=26 Score=31.34 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
++..|++|=+ |.+|..+..+++.++|++||+.++
T Consensus 156 ~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 156 KPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred CCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEE
Confidence 5677777744 559999999999999999999887
No 403
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=49.36 E-value=51 Score=30.43 Aligned_cols=85 Identities=29% Similarity=0.364 Sum_probs=47.8
Q ss_pred CeEEEEcCCCchhhHHHHHHhhhcC------CcEEEEeeCCCHHHHHHHHhcC-----CCCcEEEEEcCCCCCC------
Q 019931 203 KIAIFSDALNHASIIDGIRIAERTK------MVEVFVYKHCDMSHLKTLLSCC-----TMRKKVVVTDSLFSMD------ 265 (334)
Q Consensus 203 gd~Vl~d~~~H~s~~~g~~ls~~~~------g~~v~~~~~~D~~~Le~~l~~~-----~~~~~lVv~e~v~n~~------ 265 (334)
+.+|+.|.-...+...-..++.+.. -.++..++..|.+++.+++... ..+.++||+|++....
T Consensus 73 ~~vvyidTe~~f~~~Rl~~i~~~~~~~~~~~l~~I~v~~~~~~~~l~~~L~~l~~~l~~~~ikLIVIDSIaalfr~e~~~ 152 (256)
T PF08423_consen 73 GKVVYIDTEGTFSPERLQQIAERFGLDPEEILDNIFVIRVFDLEELLELLEQLPKLLSESKIKLIVIDSIAALFRSEFSG 152 (256)
T ss_dssp SEEEEEESSSSS-HHHHHHHHHHTTS-HHHHHHTEEEEE-SSHHHHHHHHHHHHHHHHHSCEEEEEEETSSHHHHHHSGS
T ss_pred CceEEEeCCCCCCHHHHHHHhhccccccchhhhceeeeecCCHHHHHHHHHHHHhhccccceEEEEecchHHHHHHHHcc
Confidence 5688888766655433333332100 0235555666777766665432 1478999999987641
Q ss_pred -CCccC--------HHHHHHHHHHcCCEEEE
Q 019931 266 -GDFAP--------MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 266 -G~~~p--------L~~L~ela~k~ga~Liv 287 (334)
++... +..|..+|++|++.+++
T Consensus 153 ~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvv 183 (256)
T PF08423_consen 153 RGDLAERQRMLARLARILKRLARKYNIAVVV 183 (256)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTT-EEEE
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCceEEe
Confidence 22221 33578899999966543
No 404
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=48.08 E-value=1.6e+02 Score=27.36 Aligned_cols=57 Identities=7% Similarity=0.145 Sum_probs=39.8
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEcC-CCCC---CCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTDS-LFSM---DGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e~-v~n~---~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
++++++.+++.. ..+..+++++. +.+. .-...+|..|..+.++++..+++|-.|+.|
T Consensus 144 t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 144 TIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 666666655433 13456777774 4222 224577999999999999999999999876
No 405
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=47.76 E-value=1.4e+02 Score=23.56 Aligned_cols=24 Identities=21% Similarity=0.195 Sum_probs=15.0
Q ss_pred HHHHHHhHhCCCcEEEeccHHHHH
Q 019931 155 LESCLADLKKKEDCLLCPTGFAAN 178 (334)
Q Consensus 155 LE~~La~~~g~e~alv~~sG~~An 178 (334)
+++....+...++.+++.+|+...
T Consensus 3 i~~~~~~i~~~~~i~i~g~g~s~~ 26 (139)
T cd05013 3 LEKAVDLLAKARRIYIFGVGSSGL 26 (139)
T ss_pred HHHHHHHHHhCCEEEEEEcCchHH
Confidence 444444455567788888876543
No 406
>smart00642 Aamy Alpha-amylase domain.
Probab=47.37 E-value=19 Score=31.05 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=24.8
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..+++++++-|+++|+.+|+|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34677889999999999999999998654
No 407
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=45.11 E-value=31 Score=29.60 Aligned_cols=48 Identities=29% Similarity=0.423 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEcCCCCCCCC-cc-------CHHHHHHHHHHcCCEEEE
Q 019931 239 MSHLKTLLSCCTMRKKVVVTDSLFSMDGD-FA-------PMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 239 ~~~Le~~l~~~~~~~~lVv~e~v~n~~G~-~~-------pL~~L~ela~k~ga~Liv 287 (334)
++.+++.+.+. .+..+|++|+..+.... .- -+..|.++|+++|+.+++
T Consensus 129 ~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34556665542 25789999998886542 21 156788999999976654
No 408
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=43.57 E-value=37 Score=27.84 Aligned_cols=40 Identities=33% Similarity=0.463 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEec
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDe 289 (334)
.++++++. ..+.+|++.+. .|.+++.++|+++++.|+.=.
T Consensus 73 ~l~~l~~~--~~P~iIvt~~~-------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 73 RLEKLFSY--NPPCIIVTRGL-------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp HHHHHCTT--T-S-EEEETTT----------HHHHHHHHHCT--EEEES
T ss_pred HHHHHhCC--CCCEEEEECcC-------CCCHHHHHHHHHhCCcEEEcC
Confidence 34555543 24677777653 567889999999999887543
No 409
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=42.86 E-value=68 Score=26.67 Aligned_cols=55 Identities=22% Similarity=0.370 Sum_probs=37.8
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH----HH-HHHHHHHc-CCEE-EEecCccc
Q 019931 237 CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM----VE-LVKLRRKY-GFLL-VLDDAHGT 293 (334)
Q Consensus 237 ~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL----~~-L~ela~k~-ga~L-ivDeAh~~ 293 (334)
.+.+.|.+++++. +...||+=-|.+|+|...+. .+ ..+|++++ ++.+ ++||-+++
T Consensus 38 ~~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 38 KDIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred hHHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 4889999999874 45566666678899988772 22 23455566 7754 69997775
No 410
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=42.36 E-value=17 Score=33.25 Aligned_cols=29 Identities=28% Similarity=0.329 Sum_probs=25.1
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++.|+++|+.||+|-+..
T Consensus 47 ~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 47 RFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp TTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred ccchhhhhhhhhhccccccceEEEeeecc
Confidence 34777889999999999999999998754
No 411
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=41.55 E-value=78 Score=27.91 Aligned_cols=57 Identities=19% Similarity=0.356 Sum_probs=35.6
Q ss_pred EEEeeCCCHHHHHHHHhcC-----CCCcEEEEEcCCCCCC-----CC---------ccC-HHHHHHHHHHcCCEEEE
Q 019931 231 VFVYKHCDMSHLKTLLSCC-----TMRKKVVVTDSLFSMD-----GD---------FAP-MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 231 v~~~~~~D~~~Le~~l~~~-----~~~~~lVv~e~v~n~~-----G~---------~~p-L~~L~ela~k~ga~Liv 287 (334)
+..+...+.+++...++.. ..+.++|++|++.... +. +.. +..|..+|+++++.+++
T Consensus 88 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 88 IYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 5555556776666555432 2367899999987541 11 011 34578899999976664
No 412
>PLN02672 methionine S-methyltransferase
Probab=41.40 E-value=1.9e+02 Score=32.59 Aligned_cols=127 Identities=12% Similarity=0.085 Sum_probs=65.9
Q ss_pred HHHHHHHHhHhC--------CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh
Q 019931 153 RLLESCLADLKK--------KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 153 ~~LE~~La~~~g--------~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
..+++.+|.|.. .+.+++|+|-..|+.++++...-.-.+ =|.-++ +.-+......+....
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~ 496 (1082)
T PLN02672 429 KRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAI-----------VDEHLT-RWLPKKWLTSLAIEN 496 (1082)
T ss_pred hHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHh-----------hhhhhh-ccCCHHHHhHhhhhc
Confidence 345666666543 367899999999999988743211000 011111 111111111111110
Q ss_pred ----hcCC--cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 225 ----RTKM--VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 225 ----~~~g--~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
...+ +.++.-|+.. +.+-+++++. ++++|++.-.....-+..-++.|.+.+++.|++|+.|.+--+-
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1082)
T PLN02672 497 ATSDSKSDDVITVIEAPRQS-DLVIELIKKL--KPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLE 569 (1082)
T ss_pred ccccCccCCeEEEEeCCCcc-hHHHHHHHhC--CCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhhee
Confidence 0012 2233333332 2456667654 5677776433221122334788999999999999999875544
No 413
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=40.52 E-value=69 Score=31.43 Aligned_cols=55 Identities=11% Similarity=0.361 Sum_probs=37.3
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCC--------CCccC----HHHHHHHHHHcCCEEE
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMD--------GDFAP----MVELVKLRRKYGFLLV 286 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~--------G~~~p----L~~L~ela~k~ga~Li 286 (334)
++..+...+++.+.+.+++ .++++|++|++..+. |...- +..|.++++++|+.++
T Consensus 138 ~l~l~~e~~le~I~~~i~~--~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvi 204 (372)
T cd01121 138 NLYLLAETNLEDILASIEE--LKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIF 204 (372)
T ss_pred cEEEEccCcHHHHHHHHHh--cCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3445566788888888865 367899999986542 11111 3458889999997554
No 414
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]
Probab=40.10 E-value=2e+02 Score=28.49 Aligned_cols=47 Identities=21% Similarity=0.276 Sum_probs=37.3
Q ss_pred CCccccccCchHHHHHHHHHHHhHhCCC--cEE---EeccHHHHHHHHHHHH
Q 019931 139 PRGSALICGYTNYHRLLESCLADLKKKE--DCL---LCPTGFAANMAVIVAV 185 (334)
Q Consensus 139 ~~~sr~~~G~~~~~~~LE~~La~~~g~e--~al---v~~sG~~An~~ai~al 185 (334)
..++|...|..++.+.|...|..+-|-. ..+ +|.|||-++.+++.+.
T Consensus 163 kRGyR~~~g~ApLketLAaAil~lagw~~~~pl~DPmCGSGTi~IEAAl~~~ 214 (381)
T COG0116 163 KRGYRVYDGPAPLKETLAAAILLLAGWKPDEPLLDPMCGSGTILIEAALIAA 214 (381)
T ss_pred hccccccCCCCCchHHHHHHHHHHcCCCCCCccccCCCCccHHHHHHHHhcc
Confidence 4678999999999899999888887732 233 5689999999999763
No 415
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=40.09 E-value=62 Score=28.91 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=34.1
Q ss_pred CCHHHHHHHHhcC--CCCcEEEEEcCCCCCC-CC-ccC--------HHHHHHHHHHcCCEEEE
Q 019931 237 CDMSHLKTLLSCC--TMRKKVVVTDSLFSMD-GD-FAP--------MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 237 ~D~~~Le~~l~~~--~~~~~lVv~e~v~n~~-G~-~~p--------L~~L~ela~k~ga~Liv 287 (334)
.++++|+..++.. ..+.++|++|++..+. +. ..+ +..|.++|+++|+.+++
T Consensus 106 ~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 106 LTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3677777666532 1367899999988652 21 111 56788999999987765
No 416
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=39.03 E-value=2.9e+02 Score=26.74 Aligned_cols=57 Identities=9% Similarity=0.148 Sum_probs=38.9
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEcC---CC-CCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTDS---LF-SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e~---v~-n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
+++++....+.. ..+..+++++. .| +..-...+|..|..+.+.++..+|+|-.|+.|
T Consensus 212 ti~E~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~~G 274 (335)
T PRK08673 212 TIEEWLMAAEYILAEGNPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHATG 274 (335)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCCCc
Confidence 555555444322 23567777774 34 22334567889999998899999999999977
No 417
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=38.87 E-value=2.8e+02 Score=27.31 Aligned_cols=58 Identities=12% Similarity=0.167 Sum_probs=37.9
Q ss_pred EEEEeeC--CCHHHHHHHHhcCC---CCcEEEEEcCCCCCCCC-ccC--------HHHHHHHHHHcCCEEEE
Q 019931 230 EVFVYKH--CDMSHLKTLLSCCT---MRKKVVVTDSLFSMDGD-FAP--------MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 230 ~v~~~~~--~D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~-~~p--------L~~L~ela~k~ga~Liv 287 (334)
.+..++. .+++++...+++.. ++..+|++|....+... -.+ ...|.++|+++++.+|+
T Consensus 278 ~l~i~d~~~~t~~~i~~~~r~~~~~~~~~~lvvIDyLql~~~~~~~~~~~~~~~i~~~Lk~lAke~~i~Vi~ 349 (421)
T TIGR03600 278 DLYIDDTGGLTVAQIRSIARRIKRKKGGLDLIVVDYIQLMAPTRGRDRNEELGGISRGLKALAKELDVPVVL 349 (421)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 4444433 46788877766331 25779999998877542 111 34688899999987775
No 418
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=37.76 E-value=30 Score=35.00 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=27.1
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..+|++|++-|+++|+.+|+|-+.-
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34556888899999999999999999998743
No 419
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=37.55 E-value=59 Score=29.55 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|=+ +.+|.++.++++.++|++||+.++
T Consensus 168 ~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3566777754 467999999999999999999886
No 420
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=36.51 E-value=73 Score=28.38 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
++..|++|=+ +.+|+.++.+++.++|++||+.++
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 4677777765 459999999999999999999887
No 421
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=36.37 E-value=62 Score=29.32 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|=+ +.+|..++.+++.++|++||+.++
T Consensus 167 ~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 167 KEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred CceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 3566777754 577999999999999999999886
No 422
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=34.86 E-value=99 Score=26.09 Aligned_cols=54 Identities=24% Similarity=0.406 Sum_probs=37.4
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH-HHH----HHHHcCC-EEEEecCcc
Q 019931 237 CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE-LVK----LRRKYGF-LLVLDDAHG 292 (334)
Q Consensus 237 ~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~-L~e----la~k~ga-~LivDeAh~ 292 (334)
.|.+.|.+++++. +...|++--|.||+|...|..+ +.+ |.+++++ +.++||=-+
T Consensus 40 ~~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 3788899999874 5667777789999998888432 222 4445665 446888544
No 423
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=34.70 E-value=2.4e+02 Score=26.51 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=20.4
Q ss_pred ccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 268 FAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 268 ~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
.-|+..+.-+.+...+.+|+|-+|+.|
T Consensus 200 tLDi~aV~~~kq~THLPVivDpSH~~G 226 (286)
T COG2876 200 TLDISAVPILKQETHLPVIVDPSHATG 226 (286)
T ss_pred eechHHHHHHHhhcCCCEEECCCCccc
Confidence 456777777777778888888888765
No 424
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.51 E-value=65 Score=29.06 Aligned_cols=19 Identities=37% Similarity=0.627 Sum_probs=16.5
Q ss_pred HHHHHHHHHHcCCEEEEec
Q 019931 271 MVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDe 289 (334)
.+++.++|++|++.||+++
T Consensus 54 a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 54 AEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHHHhCCeEEecC
Confidence 4679999999999998876
No 425
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=34.19 E-value=71 Score=28.97 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|= -+.+|++.+++++.++|++||+.++
T Consensus 167 ~P~avi~ei-~~~~G~~~~~~~~~~fA~~~~l~~v 200 (217)
T PRK03353 167 KPAGVLCEL-TNDDGTMARAPECIAFAKQHNMPVL 200 (217)
T ss_pred CceEEEEEe-ecCCCCcccHHHHHHHHHHcCCcEE
Confidence 356666664 4567999999999999999999885
No 426
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.55 E-value=3.9e+02 Score=24.63 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEe--ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 149 TNYHRLLESCLADLKKKEDCLLC--PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~--~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
++-.-.|-+-+.++++.+.++-. -+|++|+..++. +-. .|. |+.-+.++.+.--+.++.+..
T Consensus 58 ~~d~g~fl~~li~~~~ak~~lelGvfTGySaL~~Ala-lp~--------------dGr-v~a~eid~~~~~~~~~~~k~a 121 (237)
T KOG1663|consen 58 GPDKGQFLQMLIRLLNAKRTLELGVFTGYSALAVALA-LPE--------------DGR-VVAIEIDADAYEIGLELVKLA 121 (237)
T ss_pred ChHHHHHHHHHHHHhCCceEEEEecccCHHHHHHHHh-cCC--------------Cce-EEEEecChHHHHHhHHHHHhc
Confidence 35556777888888898887654 588888766553 211 244 444445555554445555432
Q ss_pred C-CcEEEEeeCCCHHHHHHHHhcCCCCc-EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 227 K-MVEVFVYKHCDMSHLKTLLSCCTMRK-KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 227 ~-g~~v~~~~~~D~~~Le~~l~~~~~~~-~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
. .-++....-.-.+.|.+++.+....+ -+++++.==-+ ....++++..|.+ .|-+|++|.+--.|
T Consensus 122 gv~~KI~~i~g~a~esLd~l~~~~~~~tfDfaFvDadK~n--Y~~y~e~~l~Llr-~GGvi~~DNvl~~G 188 (237)
T KOG1663|consen 122 GVDHKITFIEGPALESLDELLADGESGTFDFAFVDADKDN--YSNYYERLLRLLR-VGGVIVVDNVLWPG 188 (237)
T ss_pred cccceeeeeecchhhhHHHHHhcCCCCceeEEEEccchHH--HHHHHHHHHhhcc-cccEEEEeccccCC
Confidence 1 12334444456788888887643233 46776642211 1233666677664 67889999976555
No 427
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.94 E-value=75 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|= -+.+|+.+.++++.++|++||+.++
T Consensus 172 ~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 172 RPAGVLCEL-MNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred CceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEE
Confidence 356666664 5668999999999999999999886
No 428
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=32.48 E-value=1.1e+02 Score=27.51 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|=+ +.+|..+..+++.++|++|++.++
T Consensus 157 ~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 4567777754 458999999999999999999886
No 429
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=32.04 E-value=1.1e+02 Score=25.13 Aligned_cols=54 Identities=24% Similarity=0.440 Sum_probs=36.8
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH----H-HHHHHHHcCC-EEEEecCccc
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV----E-LVKLRRKYGF-LLVLDDAHGT 293 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~----~-L~ela~k~ga-~LivDeAh~~ 293 (334)
+.+.|++++++. +...||+=-|.+|+|...+.. + ..+|++++++ +.++||-+++
T Consensus 36 ~~~~l~~~i~~~--~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~TT 95 (130)
T TIGR00250 36 DWSRIEELLKEW--TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLST 95 (130)
T ss_pred HHHHHHHHHHHc--CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 577888888874 455666667788999988732 2 2335556675 5579997775
No 430
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=31.92 E-value=4.9e+02 Score=25.32 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=64.0
Q ss_pred cEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhH---HHHHHhhhcCCcEEEEeeCCCHHHH
Q 019931 167 DCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASII---DGIRIAERTKMVEVFVYKHCDMSHL 242 (334)
Q Consensus 167 ~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~---~g~~ls~~~~g~~v~~~~~~D~~~L 242 (334)
.+|++ ..|+-....++. |.+. ...+++.|.++...+. ..-++....+...+..++.+|.+.|
T Consensus 4 ~VLVtGgaGyiGsht~l~-L~~~-------------gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L 69 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLA-LLKR-------------GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEAL 69 (343)
T ss_pred EEEEecCCcceehHHHHH-HHhC-------------CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHH
Confidence 45666 466766666665 3443 2567888887655432 2222232223456666778899999
Q ss_pred HHHHhcCCCCcEEEEEc-------CCCCCCC----CccCHHHHHHHHHHcCCEEEEecCcccccccC
Q 019931 243 KTLLSCCTMRKKVVVTD-------SLFSMDG----DFAPMVELVKLRRKYGFLLVLDDAHGTFVCGK 298 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e-------~v~n~~G----~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~ 298 (334)
+++.++.+ -..++-+. ++-+|.- .+.-.-.+.+.+++||..-++=.+ +..++|.
T Consensus 70 ~kvF~~~~-fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~ss-satvYG~ 134 (343)
T KOG1371|consen 70 EKLFSEVK-FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSS-SATVYGL 134 (343)
T ss_pred HHHHhhcC-CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEec-ceeeecC
Confidence 99998754 22333221 2222210 111223578899999965555433 3345664
No 431
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=30.96 E-value=78 Score=30.74 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|-+ +.+|+.++++++.++|++||+.++
T Consensus 156 ~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 189 (339)
T PRK09314 156 KPVAVICEIM-KEDGTMARRDDLEDFAKKHNLKMI 189 (339)
T ss_pred CceEEEEEEe-cCCCCcccHHHHHHHHHHcCCcEE
Confidence 4577777754 678999999999999999998875
No 432
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=30.76 E-value=2.9e+02 Score=28.01 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCCCCCCccCHHHHHH-HHHHcC-CEEEEecCcccccccC
Q 019931 250 TMRKKVVVTDSLFSMDGDFAPMVELVK-LRRKYG-FLLVLDDAHGTFVCGK 298 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~pL~~L~e-la~k~g-a~LivDeAh~~Gv~G~ 298 (334)
++.++++.+.+-...+-. ++.+.. |.+++- .+++|||||...-+|.
T Consensus 111 kp~~K~LYITPE~AAt~~---FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGH 158 (641)
T KOG0352|consen 111 KPTIKMLYITPEGAATDG---FQKLLNGLANRDVLRYIVVDEAHCVSQWGH 158 (641)
T ss_pred CCceeEEEEchhhhhhhh---HHHHHHHHhhhceeeeEEechhhhHhhhcc
Confidence 456787776543322111 344433 444433 5889999999876654
No 433
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=30.22 E-value=3.1e+02 Score=26.90 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=40.8
Q ss_pred EEeecCccCCCCCCHHHHHHHHH-----hcCCC----CccccccCchHHHHHHHHHHHhHhCCCc---EEEeccH-HHHH
Q 019931 112 LLFSGNDYLGLSSHPTIAKAAAR-----HGMGP----RGSALICGYTNYHRLLESCLADLKKKED---CLLCPTG-FAAN 178 (334)
Q Consensus 112 l~f~sn~yLgl~~~p~v~~a~~~-----~g~g~----~~sr~~~G~~~~~~~LE~~La~~~g~e~---alv~~sG-~~An 178 (334)
.||++.- - .-+|+|.+.+++ .|.|. .++|.-.+ ...+.+.|+.+.++++.++ ++++.+| +...
T Consensus 7 ~nFsaGP-a--~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~-~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 7 YNFSAGP-A--ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEF-KNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCc-c--cCCHHHHHHHHHHHhhhccCCcceeeeccccHHH-HHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence 3777653 1 136777664432 23332 23343332 3567899999999999653 5666655 4444
Q ss_pred HHHHHHHhh
Q 019931 179 MAVIVAVGN 187 (334)
Q Consensus 179 ~~ai~al~~ 187 (334)
.++...|+.
T Consensus 83 ~~~p~nLl~ 91 (365)
T COG1932 83 AMAPMNLLG 91 (365)
T ss_pred HHHHHhhhc
Confidence 455555554
No 434
>COG0468 RecA RecA/RadA recombinase [DNA replication, recombination, and repair]
Probab=29.79 E-value=4.8e+02 Score=24.57 Aligned_cols=86 Identities=13% Similarity=0.157 Sum_probs=48.6
Q ss_pred CeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhc----CCCCcEEEEEcCCCCCCC-------Ccc--
Q 019931 203 KIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSC----CTMRKKVVVTDSLFSMDG-------DFA-- 269 (334)
Q Consensus 203 gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~----~~~~~~lVv~e~v~n~~G-------~~~-- 269 (334)
+.+++.|.-.-........+.... -.++..+...+.++-..++.. ...+..+|+++++....= ...
T Consensus 89 ~~a~fIDtE~~l~p~r~~~l~~~~-~d~l~v~~~~~~e~q~~i~~~~~~~~~~~i~LvVVDSvaa~~r~~~~~d~~~~~~ 167 (279)
T COG0468 89 GKAAFIDTEHALDPERAKQLGVDL-LDNLLVSQPDTGEQQLEIAEKLARSGAEKIDLLVVDSVAALVRAEEIEDGHLGLR 167 (279)
T ss_pred CeEEEEeCCCCCCHHHHHHHHHhh-hcceeEecCCCHHHHHHHHHHHHHhccCCCCEEEEecCcccchhhhcCcchHHHH
Confidence 477888764433333333332110 234555555555544443332 222478999999887521 111
Q ss_pred ------CHHHHHHHHHHcCCEEEEec
Q 019931 270 ------PMVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 270 ------pL~~L~ela~k~ga~LivDe 289 (334)
-+..|..+++++++.+++..
T Consensus 168 ~r~ls~~l~~L~~~a~~~~~~vi~~N 193 (279)
T COG0468 168 ARLLSKALRKLTRLANKYNTAVIFTN 193 (279)
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEC
Confidence 16678889999999888765
No 435
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=29.55 E-value=1.1e+02 Score=25.33 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH-HHHHHHHHHcCCEEEEe
Q 019931 239 MSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM-VELVKLRRKYGFLLVLD 288 (334)
Q Consensus 239 ~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL-~~L~ela~k~ga~LivD 288 (334)
.+.|+++++..++++++|++... .+......+ +.+.++|++|.-+.++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~-~~~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPH-VPRPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECC-CCcchHHHHHHHHHHHHHHCCCcEEec
Confidence 35677777765544666665543 222211122 34788999994455555
No 436
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=29.54 E-value=4.4e+02 Score=24.64 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCCCCCC---ccCHHHHHHHHHHcCCEEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGD---FAPMVELVKLRRKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~---~~pL~~L~ela~k~ga~LivDeAh~~Gv 295 (334)
.+..+|++|==.+. |. +.|+..+.-+.+ .+..+|+|-+|+...
T Consensus 143 Gn~~viLcERG~tf-~y~r~~~D~~~ip~~k~-~~~PVi~DpSHsvq~ 188 (258)
T TIGR01362 143 GNKNILLCERGTSF-GYNNLVVDMRSLPIMRE-LGCPVIFDATHSVQQ 188 (258)
T ss_pred CCCcEEEEeCCCCc-CCCCcccchhhhHHHHh-cCCCEEEeCCccccC
Confidence 36677777733322 32 667777776655 489999999998543
No 437
>PRK05638 threonine synthase; Validated
Probab=29.12 E-value=4.5e+02 Score=26.20 Aligned_cols=61 Identities=7% Similarity=0.045 Sum_probs=34.2
Q ss_pred CCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHH
Q 019931 164 KKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHL 242 (334)
Q Consensus 164 g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~L 242 (334)
|.+.++..+||.++...+..+-.. |-..+|+++...-..-...++.. |++++.++- +.++.
T Consensus 111 g~~~vv~aSsGN~g~alA~~aa~~-------------G~~~~i~vp~~~~~~k~~~~~~~----GA~vi~v~~-~~~~~ 171 (442)
T PRK05638 111 AANGFIVASDGNAAASVAAYSARA-------------GKEAFVVVPRKVDKGKLIQMIAF----GAKIIRYGE-SVDEA 171 (442)
T ss_pred CCCEEEEeCCChHHHHHHHHHHHc-------------CCCEEEEEeCCCCHHHHHHHHhc----CcEEEEECC-CHHHH
Confidence 556566668888776655543221 12456776654433334444433 899988864 44433
No 438
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=29.06 E-value=4.1e+02 Score=23.53 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhHhCC-----CcE--EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh--hHHHHH
Q 019931 151 YHRLLESCLADLKKK-----EDC--LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS--IIDGIR 221 (334)
Q Consensus 151 ~~~~LE~~La~~~g~-----e~a--lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s--~~~g~~ 221 (334)
..+.+.+.|=.+.+. ..+ ++..||..+..+ +.+ +...+++++...-+. +..-+.
T Consensus 25 T~drVREalFNil~~~~i~g~~~LDlFAGSGaLGlEA----lSR-------------GA~~~~~vE~~~~a~~~l~~N~~ 87 (187)
T COG0742 25 TTDRVREALFNILAPDEIEGARVLDLFAGSGALGLEA----LSR-------------GAARVVFVEKDRKAVKILKENLK 87 (187)
T ss_pred CchHHHHHHHHhccccccCCCEEEEecCCccHhHHHH----HhC-------------CCceEEEEecCHHHHHHHHHHHH
Confidence 335566666655543 233 345788766554 333 135567777543222 333333
Q ss_pred HhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHH
Q 019931 222 IAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLR 278 (334)
Q Consensus 222 ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela 278 (334)
... ...+...+..+....|+++-.. ..-.+|+.|+||. -|...+...+..+.
T Consensus 88 ~l~--~~~~~~~~~~da~~~L~~~~~~--~~FDlVflDPPy~-~~l~~~~~~~~~~~ 139 (187)
T COG0742 88 ALG--LEGEARVLRNDALRALKQLGTR--EPFDLVFLDPPYA-KGLLDKELALLLLE 139 (187)
T ss_pred HhC--CccceEEEeecHHHHHHhcCCC--CcccEEEeCCCCc-cchhhHHHHHHHHH
Confidence 331 1244555554444333332221 1257999999998 35444444444433
No 439
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=28.48 E-value=4.6e+02 Score=23.95 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=15.6
Q ss_pred HHHHHHHHhHhCCCcEEEeccHHHH
Q 019931 153 RLLESCLADLKKKEDCLLCPTGFAA 177 (334)
Q Consensus 153 ~~LE~~La~~~g~e~alv~~sG~~A 177 (334)
+++++....+..++++.++..|..+
T Consensus 116 ~~l~~~~~~i~~a~~I~i~G~G~s~ 140 (278)
T PRK11557 116 EKLHECVTMLRSARRIILTGIGASG 140 (278)
T ss_pred HHHHHHHHHHhcCCeEEEEecChhH
Confidence 4455555455667778888777653
No 440
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=27.92 E-value=2.8e+02 Score=21.51 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=39.2
Q ss_pred CcEEEEeeCC-CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc--CCEEEEecCcc
Q 019931 228 MVEVFVYKHC-DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHG 292 (334)
Q Consensus 228 g~~v~~~~~~-D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~ 292 (334)
|.++..++.+ +.+++.+.+++. ++.+|.+...+ ........++.+..|+. ++.+++=..|.
T Consensus 28 G~~v~~~d~~~~~~~l~~~~~~~--~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 28 GHEVDILDANVPPEELVEALRAE--RPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp TBEEEEEESSB-HHHHHHHHHHT--TCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCeEEEECCCCCHHHHHHHHhcC--CCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 7888888765 568888877764 45566654432 33455567777777776 67888755543
No 441
>KOG1564 consensus DNA repair protein RHP57 [Replication, recombination and repair]
Probab=27.34 E-value=1.3e+02 Score=28.69 Aligned_cols=60 Identities=22% Similarity=0.268 Sum_probs=40.4
Q ss_pred CcEEEEeeCCCHHHHHHHHhcC------CCCcEEEEEcCCCCCCC-----CccC-----------HHHHHHHHHHcCCEE
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCC------TMRKKVVVTDSLFSMDG-----DFAP-----------MVELVKLRRKYGFLL 285 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~------~~~~~lVv~e~v~n~~G-----~~~p-----------L~~L~ela~k~ga~L 285 (334)
|..++...++|.+.++..+... +++.++||+++|....= ...+ -.+|.++|++|+.-+
T Consensus 177 gd~IFv~~~~d~d~l~~iv~~qlPiL~~r~~i~LVIiDSVAa~fR~E~d~~~Sdl~~r~~~l~rla~~Lr~LA~~~~~aV 256 (351)
T KOG1564|consen 177 GDHIFVENVHDVDHLLHIVNRQLPILLNRKKIKLVIIDSVAALFRSEFDYNPSDLKKRARHLFRLAGKLRQLASKFDLAV 256 (351)
T ss_pred CceEEEEeccchhhHHHHHhhhccceeccCcceEEEEehhhHHHHHHhccChhhhhhHHHHHHHHHHHHHHHHHhcCccE
Confidence 4456777788999999887642 24678999999875421 1112 135788999999655
Q ss_pred EE
Q 019931 286 VL 287 (334)
Q Consensus 286 iv 287 (334)
++
T Consensus 257 V~ 258 (351)
T KOG1564|consen 257 VC 258 (351)
T ss_pred EE
Confidence 43
No 442
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair]
Probab=27.31 E-value=83 Score=31.40 Aligned_cols=53 Identities=21% Similarity=0.223 Sum_probs=35.4
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc-----CCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY-----GFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~-----ga~LivDeAh~~G 294 (334)
--..|.++|.... +..++-++.+++- +.+++++.+-+++. ..+|++||+|.+.
T Consensus 60 GKTTlA~liA~~~-~~~f~~~sAv~~g---vkdlr~i~e~a~~~~~~gr~tiLflDEIHRfn 117 (436)
T COG2256 60 GKTTLARLIAGTT-NAAFEALSAVTSG---VKDLREIIEEARKNRLLGRRTILFLDEIHRFN 117 (436)
T ss_pred CHHHHHHHHHHhh-CCceEEecccccc---HHHHHHHHHHHHHHHhcCCceEEEEehhhhcC
Confidence 3445666665432 3456666666654 77777777777542 4899999999964
No 443
>PLN03244 alpha-amylase; Provisional
Probab=26.64 E-value=61 Score=35.16 Aligned_cols=33 Identities=27% Similarity=0.242 Sum_probs=27.5
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCccc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~ 293 (334)
+.+..|...+|+++++.|++.|+-||+|-++.-
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH 465 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSY 465 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 334457777899999999999999999998863
No 444
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=26.47 E-value=4.3e+02 Score=22.95 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=36.8
Q ss_pred CeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH
Q 019931 203 KIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK 280 (334)
Q Consensus 203 gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k 280 (334)
..+++++....+. +..-+.... ...++..+..+....++++... ..+--+|++|+||...-. ++++.+...+
T Consensus 66 ~~v~fVE~~~~a~~~i~~N~~~l~--~~~~~~v~~~d~~~~l~~~~~~-~~~fDiIflDPPY~~~~~---~~~~l~~l~~ 139 (183)
T PF03602_consen 66 KSVVFVEKNRKAIKIIKKNLEKLG--LEDKIRVIKGDAFKFLLKLAKK-GEKFDIIFLDPPYAKGLY---YEELLELLAE 139 (183)
T ss_dssp SEEEEEES-HHHHHHHHHHHHHHT---GGGEEEEESSHHHHHHHHHHC-TS-EEEEEE--STTSCHH---HHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHHhC--CCcceeeeccCHHHHHHhhccc-CCCceEEEECCCcccchH---HHHHHHHHHH
Confidence 5678887654332 223332221 1123556666667777776543 235679999999975221 3555554444
Q ss_pred c
Q 019931 281 Y 281 (334)
Q Consensus 281 ~ 281 (334)
+
T Consensus 140 ~ 140 (183)
T PF03602_consen 140 N 140 (183)
T ss_dssp T
T ss_pred C
Confidence 3
No 445
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=26.30 E-value=1.3e+02 Score=28.80 Aligned_cols=23 Identities=26% Similarity=0.489 Sum_probs=20.6
Q ss_pred HHHHHHHHHHcCCEEEEecCccc
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~ 293 (334)
+.+|.++|++.|+.+++|-....
T Consensus 148 y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 148 YAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred HHHHHHHHHhcCCeEEEECChHH
Confidence 88999999999999999986654
No 446
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases. 1-acyl-sn-glycerol-3-phosphate acyltransferase is also called 1-AGP acyltransferase, lysophosphatidic acid acyltransferase, and LPA acyltransferase.
Probab=26.20 E-value=2.2e+02 Score=22.18 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=28.7
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH-HHHHHHHHcCCEEE
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV-ELVKLRRKYGFLLV 286 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~-~L~ela~k~ga~Li 286 (334)
.+.+++++ ....+|+.|+..+..|...|+. .+..++++.|+.++
T Consensus 81 ~~~~~l~~--g~~v~ifPeG~~~~~~~~~~f~~g~~~la~~~~~pvv 125 (130)
T TIGR00530 81 AAIEVLKQ--GRSIGVFPEGTRSRGRDILPFKKGAFHIAIKAGVPIL 125 (130)
T ss_pred HHHHHHhC--CCEEEEeCCCCCCCCCCCCCcchhHHHHHHHcCCCEE
Confidence 34444443 2445778888877777776644 57778888887655
No 447
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=25.98 E-value=1.3e+02 Score=30.47 Aligned_cols=55 Identities=16% Similarity=0.331 Sum_probs=36.6
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCC--------CCccC----HHHHHHHHHHcCCEEE
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMD--------GDFAP----MVELVKLRRKYGFLLV 286 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~--------G~~~p----L~~L~ela~k~ga~Li 286 (334)
++..+...+++.+.+.+++. +.++|++|++..+. |.... +..|.++++++|+-++
T Consensus 150 ~l~~~~e~~~~~I~~~i~~~--~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 150 NLYVLSETNWEQICANIEEE--NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred HeEEcCCCCHHHHHHHHHhc--CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 34455567888888888763 57899999987642 22222 2357888999996443
No 448
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=25.91 E-value=1.3e+02 Score=26.55 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCC-----CCCc--c--------CHHHHHHHHHHcCCEEEE
Q 019931 252 RKKVVVTDSLFSM-----DGDF--A--------PMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 252 ~~~lVv~e~v~n~-----~G~~--~--------pL~~L~ela~k~ga~Liv 287 (334)
+.++||+|++.+. .+.- . -+..|..+|+++++.+++
T Consensus 115 ~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~ 165 (235)
T cd01123 115 RIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVI 165 (235)
T ss_pred CeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 6889999999864 1221 0 144677888999976553
No 449
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=25.80 E-value=5e+02 Score=24.09 Aligned_cols=28 Identities=21% Similarity=0.180 Sum_probs=19.8
Q ss_pred HHHHHHHHhHhCCCcEEEeccHHHHHHH
Q 019931 153 RLLESCLADLKKKEDCLLCPTGFAANMA 180 (334)
Q Consensus 153 ~~LE~~La~~~g~e~alv~~sG~~An~~ 180 (334)
++|++....+..++.++++..|.....+
T Consensus 118 ~~l~~av~~L~~A~rI~~~G~g~S~~vA 145 (281)
T COG1737 118 EALERAVELLAKARRIYFFGLGSSGLVA 145 (281)
T ss_pred HHHHHHHHHHHcCCeEEEEEechhHHHH
Confidence 5677777777788888888666554443
No 450
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=25.77 E-value=3.9e+02 Score=24.87 Aligned_cols=57 Identities=11% Similarity=0.191 Sum_probs=35.2
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEcC-C--C-CCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTDS-L--F-SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e~-v--~-n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
+++++...++.. ..+..+++++. . + +..-...++..|..+.++++..+++|-.|+.|
T Consensus 146 s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 146 TLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 455544443322 13455666653 1 2 22223446888888888889999999999976
No 451
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=25.74 E-value=1.4e+02 Score=31.11 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++| +-+.+|++++++++.++|++||+.+|
T Consensus 161 ~PaaVicE-i~~~dG~mar~~~l~~fA~~h~L~ii 194 (555)
T PRK09319 161 YPAGVICE-IQNPDGSMARLPELKEYAKQHGLKLI 194 (555)
T ss_pred CceEEEEE-EecCCCCccCHHHHHHHHHHcCCcEE
Confidence 35677777 66778999999999999999998886
No 452
>PRK11823 DNA repair protein RadA; Provisional
Probab=25.56 E-value=1.8e+02 Score=29.21 Aligned_cols=55 Identities=20% Similarity=0.418 Sum_probs=36.5
Q ss_pred EEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCC--------CCccC----HHHHHHHHHHcCCEEEE
Q 019931 231 VFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMD--------GDFAP----MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 231 v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~--------G~~~p----L~~L~ela~k~ga~Liv 287 (334)
+..+...+++.+.+.+++ .++++|++|++..+. |.... +.+|.++++++|+.+++
T Consensus 137 l~~~~e~~l~~i~~~i~~--~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 137 LYLLAETNLEAILATIEE--EKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred EEEeCCCCHHHHHHHHHh--hCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 444555678888777765 367899999987642 11211 34588899999975543
No 453
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=24.90 E-value=1.7e+02 Score=23.71 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=34.5
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
++++|+.++.+. .-.+|+..+.+.+ +.-.++..+++++.++-+++
T Consensus 50 ~~eEle~~lee~--~E~ivvGTG~~G~---l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 50 ALEELEELLEEG--PEVIVVGTGQSGM---LELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred CHHHHHHHHhcC--CcEEEEecCceeE---EEeCHHHHHHHHhcCCeEEE
Confidence 899999999862 3467777776654 66778889999999976664
No 454
>PRK11172 dkgB 2,5-diketo-D-gluconate reductase B; Provisional
Probab=24.83 E-value=5.4e+02 Score=23.50 Aligned_cols=49 Identities=8% Similarity=0.135 Sum_probs=26.9
Q ss_pred eCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 235 KHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 235 ~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
...+.+.++++++... ...+.+....+|+. .+-.++.+.|+++|+-++.
T Consensus 129 Sn~~~~~l~~~~~~~~-~~~~~~~Q~~~~~~---~~~~~ll~~~~~~gi~v~a 177 (267)
T PRK11172 129 SNFTIALMKQAIAAVG-AENIATNQIELSPY---LQNRKVVAFAKEHGIHVTS 177 (267)
T ss_pred ccCCHHHHHHHHHhcC-CCCCeEEeeecCCC---CCcHHHHHHHHHCCCEEEE
Confidence 3336667777665321 11233334445541 1225788888888887775
No 455
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=24.26 E-value=2e+02 Score=26.10 Aligned_cols=49 Identities=16% Similarity=0.146 Sum_probs=36.7
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
.+++++++.+. ...+|.++..+-+--+- ++++|.+-.|..|.++|.|-+
T Consensus 87 tlkeVd~L~~~---Ga~IIA~DaT~R~RP~~-~~~~~i~~~k~~~~l~MAD~S 135 (229)
T COG3010 87 TLKEVDALAEA---GADIIAFDATDRPRPDG-DLEELIARIKYPGQLAMADCS 135 (229)
T ss_pred cHHHHHHHHHC---CCcEEEeecccCCCCcc-hHHHHHHHhhcCCcEEEeccC
Confidence 46777777765 67788888877542222 788888888889999999963
No 456
>PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others []. All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A ....
Probab=24.19 E-value=3.6e+02 Score=24.45 Aligned_cols=65 Identities=9% Similarity=0.003 Sum_probs=41.1
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
++.+-+...+.+.++.+++. ....+.+....+|+. ...+.+.+.++|+++|+-++.=...+.|.+
T Consensus 131 ir~iGvs~~~~~~l~~~~~~--~~~~~~~~q~~~n~~-~~~~~~~l~~~~~~~gi~v~a~~~l~~G~l 195 (283)
T PF00248_consen 131 IRHIGVSNFSPEQLEAALKI--GSIPPDVVQINYNLL-NRREEEGLLEFCREHGIGVIAYSPLAGGLL 195 (283)
T ss_dssp EEEEEEES--HHHHHHHHTC--TSS-ESEEEEE-BTT-BHBGGHHHHHHHHHTT-EEEEESTTGGGCG
T ss_pred cccccccccccccccccccc--ccccccccccccccc-cccccccccccccccccccccccccccCcc
Confidence 33344444468888887433 245566666777774 456788999999999999997666665544
No 457
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=24.04 E-value=3.5e+02 Score=25.05 Aligned_cols=60 Identities=15% Similarity=0.018 Sum_probs=37.1
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEec
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDe 289 (334)
|..+.+|-..|+---+++.+ ......+....++-+--|.. +...|..++++.++.+|+|.
T Consensus 123 GF~VlPY~~~D~v~akrL~d-~GcaavMPlgsPIGSg~Gi~-n~~~l~~i~~~~~vPvIvDA 182 (247)
T PF05690_consen 123 GFVVLPYCTDDPVLAKRLED-AGCAAVMPLGSPIGSGRGIQ-NPYNLRIIIERADVPVIVDA 182 (247)
T ss_dssp T-EEEEEE-S-HHHHHHHHH-TT-SEBEEBSSSTTT---SS-THHHHHHHHHHGSSSBEEES
T ss_pred CCEEeecCCCCHHHHHHHHH-CCCCEEEecccccccCcCCC-CHHHHHHHHHhcCCcEEEeC
Confidence 88899999899876555544 33334445555555555644 44668888889999999997
No 458
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=23.86 E-value=1.2e+02 Score=30.02 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++| +-+.+|+.+.++++.++|++|++.++
T Consensus 143 ~p~~vice-i~~~dG~m~~~~~~~~fA~~h~l~~i 176 (387)
T PRK09318 143 KRYAVIVE-ILDEKGDSHDLDYVLKLAEKFSLPVL 176 (387)
T ss_pred CceEEEEE-EecCCCccccHHHHHHHHHHCCCcEE
Confidence 35677777 45678999999999999999998885
No 459
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=23.86 E-value=1.5e+02 Score=28.95 Aligned_cols=60 Identities=23% Similarity=0.272 Sum_probs=31.6
Q ss_pred EeeCC-CHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCc----cCHHHHHHHHHHcCCEEEEecCccc
Q 019931 233 VYKHC-DMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDF----APMVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 233 ~~~~~-D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~----~pL~~L~ela~k~ga~LivDeAh~~ 293 (334)
.|+.. ..++.++.|+... .+-+-|++ +.+.+..+. ..+++|.++|+++|.-+++|-....
T Consensus 6 vY~~~~~~~~~~~yi~~a~~~Gf~~iFT-SL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~~ 71 (357)
T PF05913_consen 6 VYPGQSSFEENKAYIEKAAKYGFKRIFT-SLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPKV 71 (357)
T ss_dssp E-CCCS-HHHHHHHHHHHHCTTEEEEEE-EE---------HHHHHHHHHHHHHHCT-EEEEEE-CCH
T ss_pred EeCCCCCHHHHHHHHHHHHHCCCCEEEC-CCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence 45544 3666666665431 23344444 355554433 3488899999999999999976553
No 460
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=23.51 E-value=1.3e+02 Score=30.03 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++| +-+.+|++++.+++.++|++|++.++
T Consensus 158 ~Paavi~e-i~~~~G~~~~~~~~~~fA~~~~l~~v 191 (402)
T PRK09311 158 QPAGVICE-IVNEDGTMARVPELRVFADEHDLALI 191 (402)
T ss_pred CceEEEEE-EecCCCcccchHHHHHHHHHcCCeEE
Confidence 35677777 55678999999999999999998875
No 461
>PRK12313 glycogen branching enzyme; Provisional
Probab=23.39 E-value=75 Score=33.43 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=24.4
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|...++++|++.|+++|+-||+|-++.
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~n 243 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVPG 243 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34566679999999999999999998765
No 462
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=23.31 E-value=1.2e+02 Score=29.83 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++| +-+.+|++++++++.++|++|++.++
T Consensus 157 ~p~avi~e-i~~~dg~m~~~~~~~~fA~~h~l~~i 190 (369)
T PRK12485 157 SPASVIVE-VMNDDGTMARRPDLEVFAAKHGIKIG 190 (369)
T ss_pred CceEEEEE-EecCCCCccChHHHHHHHHHcCCcEE
Confidence 35677777 44678999999999999999998874
No 463
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=23.25 E-value=3.2e+02 Score=25.81 Aligned_cols=53 Identities=19% Similarity=0.259 Sum_probs=33.1
Q ss_pred EEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 230 EVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 230 ~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
+-+-+..-+.++|+++++.. +...++..--+++ ..+-++|.++|+++|+.+..
T Consensus 136 r~IGVSNF~~~~L~~l~~~~--~~~p~~NQIe~hp---~~~q~el~~~~~~~gI~v~A 188 (280)
T COG0656 136 RAIGVSNFGVEHLEELLSLA--KVKPAVNQIEYHP---YLRQPELLPFCQRHGIAVEA 188 (280)
T ss_pred cEEEeeCCCHHHHHHHHHhc--CCCCceEEEEecc---CCCcHHHHHHHHHcCCEEEE
Confidence 33344555888999998763 2222222222333 44466799999999998873
No 464
>TIGR02236 recomb_radA DNA repair and recombination protein RadA. This family consists exclusively of archaeal RadA protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239), and archaeal RadB (TIGR02237). This protein is involved in DNA repair and recombination. The member from Pyrococcus horikoshii contains an intein.
Probab=23.24 E-value=1.5e+02 Score=27.91 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCCcEEEEEcCCCCCC-----C--CccC----H----HHHHHHHHHcCCEEEE
Q 019931 240 SHLKTLLSCCTMRKKVVVTDSLFSMD-----G--DFAP----M----VELVKLRRKYGFLLVL 287 (334)
Q Consensus 240 ~~Le~~l~~~~~~~~lVv~e~v~n~~-----G--~~~p----L----~~L~ela~k~ga~Liv 287 (334)
+.+.+++.+...+.++|++|++..+. | .... + ..|..++++|++.+++
T Consensus 180 d~l~~~i~~~~~~~~lVVIDSisa~~r~e~~~~~~~~~r~~~l~~~~~~L~~~a~~~~~~v~~ 242 (310)
T TIGR02236 180 EKAEDLIKELNNPVKLLIVDSLTSHFRAEYVGRGALAERQQKLNKHLHDLLRLADLYNAAVVV 242 (310)
T ss_pred HHHHHHHHhcCCCceEEEEecchHhhhHhhcCchhHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 44555665532246799998877541 1 1111 2 4577888999976643
No 465
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=23.08 E-value=1.2e+02 Score=29.30 Aligned_cols=18 Identities=6% Similarity=-0.176 Sum_probs=10.6
Q ss_pred HHHHHHHhHhCCCcEEEe
Q 019931 154 LLESCLADLKKKEDCLLC 171 (334)
Q Consensus 154 ~LE~~La~~~g~e~alv~ 171 (334)
++.++..+.+|.+..-+.
T Consensus 79 ~~Ak~q~~~~GAd~Idl~ 96 (319)
T PRK04452 79 AWAKKCVEEYGADMITLH 96 (319)
T ss_pred HHHHHHHHHhCCCEEEEE
Confidence 455555556777765444
No 466
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=23.04 E-value=71 Score=31.77 Aligned_cols=27 Identities=30% Similarity=0.274 Sum_probs=23.7
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
..|+..++.++++-++++|+.+|+|.+
T Consensus 72 ~~Gt~~d~~~li~~~H~~gi~vi~D~V 98 (505)
T COG0366 72 HFGTEEDFKELVEEAHKRGIKVILDLV 98 (505)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 568888899999999999999999985
No 467
>KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only]
Probab=23.03 E-value=4.9e+02 Score=24.86 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=45.0
Q ss_pred CchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCc
Q 019931 212 NHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 212 ~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh 291 (334)
....++.++.-......++-+-+..-+..+|++++...+.++.+-=+| ++| .-+-++|+++|+++|+++. ||
T Consensus 136 ~~~~tW~amE~~~~~Gl~rsIGVSNF~~~~le~ll~~~ki~P~vnQvE--~HP---~~~Q~~L~~fCk~~~I~v~---AY 207 (300)
T KOG1577|consen 136 DRIETWKAMEKLVDEGLVRSIGVSNFNIKQLEELLNLAKIKPAVNQVE--CHP---YLQQKKLVEFCKSKGIVVT---AY 207 (300)
T ss_pred hHHHHHHHHHHHHHcCCceEeeeecCCHHHHHHHHhcCCCCCccceee--ccC---CcChHHHHHHHhhCCcEEE---Ee
Confidence 444455555433222123444455557889999987643233332222 122 3346789999999999886 45
Q ss_pred ccccccCCCc
Q 019931 292 GTFVCGKNGG 301 (334)
Q Consensus 292 ~~Gv~G~~G~ 301 (334)
+- +|..++
T Consensus 208 Sp--Lg~~~~ 215 (300)
T KOG1577|consen 208 SP--LGSPGR 215 (300)
T ss_pred cC--CCCCCC
Confidence 53 554444
No 468
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=23.03 E-value=2.9e+02 Score=26.08 Aligned_cols=34 Identities=18% Similarity=0.446 Sum_probs=25.1
Q ss_pred cEEEEEcC--------CCCCCCC-----ccCHHHHHHHHHHcCCEEE
Q 019931 253 KKVVVTDS--------LFSMDGD-----FAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 253 ~~lVv~e~--------v~n~~G~-----~~pL~~L~ela~k~ga~Li 286 (334)
..+|.+|- .+||.|. ++|++.|...+++.|+..|
T Consensus 133 d~lIaIERpGra~dG~Y~nmrG~~I~~~~a~~D~lf~~a~~~gi~ti 179 (291)
T PF14336_consen 133 DLLIAIERPGRAADGNYYNMRGEDISHLVAPLDDLFLAAKEPGIPTI 179 (291)
T ss_pred CEEEEeCCcccCCCCCEecCcCCcCccccccHHHHHHHhhcCCCCEE
Confidence 35677774 4677663 5689999999999887765
No 469
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=22.91 E-value=75 Score=32.82 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=25.9
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCccc
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~ 293 (334)
+..|...+++++++.|+++|+-+|+|-++..
T Consensus 154 ~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH 184 (542)
T TIGR02402 154 NAYGGPDDLKALVDAAHGLGLGVILDVVYNH 184 (542)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 3456677899999999999999999988653
No 470
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=22.76 E-value=6e+02 Score=23.80 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCCC--CCCccCHHHHHHHHHHcCCEEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSM--DGDFAPMVELVKLRRKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 251 ~~~~lVv~e~v~n~--~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv 295 (334)
.+..++++|==.+. +-.+.|+..+.-+. +.+..+|+|-+|+...
T Consensus 151 Gn~~vilcERG~tf~y~r~~~D~~~vp~~k-~~~lPVi~DpSHsvq~ 196 (264)
T PRK05198 151 GNDKIILCERGTSFGYNNLVVDMRGLPIMR-ETGAPVIFDATHSVQL 196 (264)
T ss_pred CCCeEEEEeCCCCcCCCCeeechhhhHHHh-hCCCCEEEeCCccccC
Confidence 36778877732222 12346777766544 4679999999998543
No 471
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.47 E-value=4.9e+02 Score=22.19 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=32.9
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLD 288 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivD 288 (334)
+.++..|...+.++++..+++.. .+..+|+..+ -..++|+++|+.-+.-
T Consensus 100 ~~~i~~~~~~~~~e~~~~i~~~~~~G~~viVGg~------------~~~~~A~~~gl~~v~i 149 (176)
T PF06506_consen 100 GVDIKIYPYDSEEEIEAAIKQAKAEGVDVIVGGG------------VVCRLARKLGLPGVLI 149 (176)
T ss_dssp T-EEEEEEESSHHHHHHHHHHHHHTT--EEEESH------------HHHHHHHHTTSEEEES
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCcEEECCH------------HHHHHHHHcCCcEEEE
Confidence 78888888888999988887642 2456666432 2478889998876653
No 472
>PRK09361 radB DNA repair and recombination protein RadB; Provisional
Probab=22.40 E-value=1.1e+02 Score=27.07 Aligned_cols=57 Identities=19% Similarity=0.298 Sum_probs=32.0
Q ss_pred EEEeeCCCHHHHHHHHhcC----CCCcEEEEEcCCCCCCC-------Cc----cC----HHHHHHHHHHcCCEEEE
Q 019931 231 VFVYKHCDMSHLKTLLSCC----TMRKKVVVTDSLFSMDG-------DF----AP----MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 231 v~~~~~~D~~~Le~~l~~~----~~~~~lVv~e~v~n~~G-------~~----~p----L~~L~ela~k~ga~Liv 287 (334)
+..++..+.+++...++.. ..+.++|++|++..... +. .. +..|.++++++|+.+++
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~lvVIDsi~al~~~~~~~~~~~~~~~~~l~~~l~~L~~~a~~~~v~vi~ 157 (225)
T PRK09361 82 IIIFEPSSFEEQSEAIRKAEKLAKENVGLIVLDSATSLYRLELEDEEDNSKLNRELGRQLTHLLKLARKHDLAVVI 157 (225)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHHHhcccEEEEeCcHHHhHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4445555555443333211 13678999999864321 10 01 23477889999987764
No 473
>PRK10785 maltodextrin glucosidase; Provisional
Probab=22.14 E-value=75 Score=33.26 Aligned_cols=27 Identities=30% Similarity=0.378 Sum_probs=20.5
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh 291 (334)
.|+..++++|++-|++.|+.||+|-+.
T Consensus 222 ~Gt~~df~~Lv~~aH~rGikVilD~V~ 248 (598)
T PRK10785 222 LGGDAALLRLRHATQQRGMRLVLDGVF 248 (598)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 355566888888888888888888763
No 474
>PRK05595 replicative DNA helicase; Provisional
Probab=22.08 E-value=7.5e+02 Score=24.63 Aligned_cols=59 Identities=10% Similarity=0.164 Sum_probs=37.2
Q ss_pred cEEEEeeCC--CHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCc--c-C-------HHHHHHHHHHcCCEEEE
Q 019931 229 VEVFVYKHC--DMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDF--A-P-------MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 229 ~~v~~~~~~--D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~--~-p-------L~~L~ela~k~ga~Liv 287 (334)
.++..++.. +++++...+++. ..+..+|++|.+.-+.+.- . . ...|..+|+++++.+|+
T Consensus 284 ~~l~i~d~~~~t~~~i~~~~r~~~~~~~~~~vvIDylql~~~~~~~~~r~~~v~~is~~LK~lAke~~i~vi~ 356 (444)
T PRK05595 284 AKIFIDDTAGVSVMEMRSKCRRLKIEHGIDMILIDYLQLMSGGKGSESRQQEVSEISRSIKALAKEMECPVIA 356 (444)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHhcCCCEEEEeHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 344444432 567776666543 1357899999887765321 1 1 24578899999988875
No 475
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=21.94 E-value=1e+02 Score=28.47 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=20.7
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH-----HHHHHHHHcCCEEE
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV-----ELVKLRRKYGFLLV 286 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~-----~L~ela~k~ga~Li 286 (334)
|.+.+++.+++. +..+|+ |..+ |+. .+.+.|++.|+.++
T Consensus 54 ~~~~l~~~l~~~--~i~~vI-DATH-------PfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 54 DEEGLAEFLREN--GIDAVI-DATH-------PFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CHHHHHHHHHhC--CCcEEE-ECCC-------chHHHHHHHHHHHHhhcCcceE
Confidence 777777777652 233333 3322 422 35666777776554
No 476
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=21.89 E-value=6.9e+02 Score=23.68 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=67.8
Q ss_pred HHHHHHHhH----hCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcC-CCchhhHHHHHHhhhcCC
Q 019931 154 LLESCLADL----KKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDA-LNHASIIDGIRIAERTKM 228 (334)
Q Consensus 154 ~LE~~La~~----~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~-~~H~s~~~g~~ls~~~~g 228 (334)
.++..+..+ ...+.+++++.++-++...+..+.+.. .-.+...+. .....-.+.+.-.- ...
T Consensus 73 a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~------------g~~v~~i~~~~~~~~~~~~~~~~l-~~~ 139 (371)
T PF00266_consen 73 ALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRK------------GAEVRVIPADPGGSLDLEDLEEAL-NPD 139 (371)
T ss_dssp HHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHT------------TEEEEEEEEGTTSSCSHHHHHHHH-HTT
T ss_pred hhhhhhhccccccccccccccccccccccccccccccccc------------hhhhccccccccchhhhhhhhhhh-ccc
Confidence 344444444 335678888999999997777766431 112222221 22111122221110 125
Q ss_pred cEEEEeeCC--------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 229 VEVFVYKHC--------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 229 ~~v~~~~~~--------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
.+++.+.|. |++.+-++.++ .-.++++|.+++......|++ +.++=+++=..|- ++|+.|
T Consensus 140 ~~lv~~~~~~~~tG~~~pi~~I~~~~~~---~~~~~~vD~~~~~g~~~id~~-------~~~~D~~~~s~~K--l~gp~G 207 (371)
T PF00266_consen 140 TRLVSISHVENSTGVRNPIEEIAKLAHE---YGALLVVDAAQSAGCVPIDLD-------ELGADFLVFSSHK--LGGPPG 207 (371)
T ss_dssp ESEEEEESBETTTTBBSSHHHHHHHHHH---TTSEEEEE-TTTTTTSS--TT-------TTTESEEEEESTS--TTSSST
T ss_pred cceEEeecccccccEEeeeceehhhhhc---cCCceeEechhcccccccccc-------ccccceeeecccc--cCCCCc
Confidence 677777763 78888888876 357999999998744444443 3454233334565 367767
Q ss_pred ccc
Q 019931 301 GGV 303 (334)
Q Consensus 301 ~g~ 303 (334)
.|+
T Consensus 208 ~g~ 210 (371)
T PF00266_consen 208 LGF 210 (371)
T ss_dssp EEE
T ss_pred hhh
Confidence 664
No 477
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.87 E-value=1.4e+02 Score=29.83 Aligned_cols=33 Identities=21% Similarity=0.550 Sum_probs=26.2
Q ss_pred EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEec
Q 019931 254 KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDe 289 (334)
.+|+.+ |+ -|.+.+.+.+.++|++.|..+++|-
T Consensus 146 ~vVLSD--Y~-KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 146 ALVLSD--YA-KGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred EEEEec--cc-cccchhHHHHHHHHHHcCCcEEECC
Confidence 345544 43 4778889999999999999999994
No 478
>PRK05402 glycogen branching enzyme; Provisional
Probab=21.82 E-value=81 Score=33.82 Aligned_cols=27 Identities=19% Similarity=0.153 Sum_probs=23.0
Q ss_pred CCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 266 GDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 266 G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
|+..+|++|++.|+++|+-||+|-+..
T Consensus 312 Gt~~dfk~lV~~~H~~Gi~VilD~V~N 338 (726)
T PRK05402 312 GTPDDFRYFVDACHQAGIGVILDWVPA 338 (726)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 445569999999999999999998764
No 479
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=21.63 E-value=3.3e+02 Score=22.45 Aligned_cols=17 Identities=18% Similarity=0.137 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCEEEE
Q 019931 271 MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 271 L~~L~ela~k~ga~Liv 287 (334)
|.++++.|++.|+-+++
T Consensus 46 lge~v~a~h~~Girv~a 62 (132)
T PF14871_consen 46 LGEQVEACHERGIRVPA 62 (132)
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 89999999999987764
No 480
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional
Probab=21.51 E-value=8.5e+02 Score=24.62 Aligned_cols=57 Identities=12% Similarity=-0.004 Sum_probs=35.2
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC--------HHHHHHHHHHcCCEEEE
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP--------MVELVKLRRKYGFLLVL 287 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p--------L~~L~ela~k~ga~Liv 287 (334)
|.+++. ..+.+-.+-+.+++ .+...++.|-.....|..+| ......||+++|+.++.
T Consensus 189 G~~lI~-~~~giR~liraLk~--G~~vgiL~DQ~~~~~Gv~VpFFG~~a~T~tgpA~LA~rtgApVVp 253 (454)
T PRK05906 189 KGKIVP-PKNGINQALRALHQ--GEVVGIVGDQALLSSSYSYPLFGSQAFTTTSPALLAYKTGKPVIA 253 (454)
T ss_pred CCeeec-CchHHHHHHHHHhc--CCEEEEEeCCCCCCCceEeCCCCCccchhhHHHHHHHHhCCeEEE
Confidence 555442 22344455555554 34566777765544565555 56788999999998885
No 481
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=21.25 E-value=83 Score=32.49 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=17.0
Q ss_pred CCccCHHHHHHHHHHcCCEEEEecC
Q 019931 266 GDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 266 G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
|+..++++|++-|+++|+.+|+|-+
T Consensus 72 Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 72 GTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4455677777777777777777754
No 482
>KOG0742 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=21.22 E-value=65 Score=32.39 Aligned_cols=30 Identities=37% Similarity=0.677 Sum_probs=22.6
Q ss_pred CCCccCH--------HHHHHHHHH--cCCEEEEecCcccc
Q 019931 265 DGDFAPM--------VELVKLRRK--YGFLLVLDDAHGTF 294 (334)
Q Consensus 265 ~G~~~pL--------~~L~ela~k--~ga~LivDeAh~~G 294 (334)
.|+++|| .+|-+-+++ .|++|++|||-++.
T Consensus 417 GGDVAPlG~qaVTkiH~lFDWakkS~rGLllFIDEADAFL 456 (630)
T KOG0742|consen 417 GGDVAPLGAQAVTKIHKLFDWAKKSRRGLLLFIDEADAFL 456 (630)
T ss_pred CCCccccchHHHHHHHHHHHHHhhcccceEEEehhhHHHH
Confidence 5788883 455566654 69999999999874
No 483
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=20.70 E-value=3.3e+02 Score=23.88 Aligned_cols=99 Identities=17% Similarity=0.216 Sum_probs=52.0
Q ss_pred HHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEe
Q 019931 155 LESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVY 234 (334)
Q Consensus 155 LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~ 234 (334)
.++.|.+.+|+ ++++..+|....+.+.-++... | -|+ +.|- ...+-.+
T Consensus 74 i~~sle~iyGK-RvIiiGGGAqVsqVA~GAIsEA--------------------D--RHN--iRGE-------RISvDTi 121 (218)
T COG1707 74 IHRSLEEIYGK-RVIIIGGGAQVSQVARGAISEA--------------------D--RHN--IRGE-------RISVDTI 121 (218)
T ss_pred ecchHHHHhCc-EEEEECCchhHHHHHHhhcchh--------------------h--hcc--cccc-------eeeeecc
Confidence 34445556764 5888889988777777665442 1 121 1111 1222233
Q ss_pred eCCCHHHHHHHHhcCC--CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe
Q 019931 235 KHCDMSHLKTLLSCCT--MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLD 288 (334)
Q Consensus 235 ~~~D~~~Le~~l~~~~--~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivD 288 (334)
|.--.+.|.++.+... ++..+++..+ .-|.|.+ -+++.++.++||+.+|.=
T Consensus 122 PlVGEE~laEAVkAV~rLpRv~iLVLAG-slMGGkI--teaVk~lr~~hgI~VISL 174 (218)
T COG1707 122 PLVGEEELAEAVKAVARLPRVGILVLAG-SLMGGKI--TEAVKELREEHGIPVISL 174 (218)
T ss_pred cccChHHHHHHHHHHhccccceeEEEec-ccccchH--HHHHHHHHHhcCCeEEEe
Confidence 3334445555444321 2333333332 2356666 456777888999988853
No 484
>TIGR03586 PseI pseudaminic acid synthase.
Probab=20.50 E-value=5.2e+02 Score=24.94 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCCC--CCCccCHHHHHHHHHHcCCEE-EEecCccccc
Q 019931 252 RKKVVVTDSLFSM--DGDFAPMVELVKLRRKYGFLL-VLDDAHGTFV 295 (334)
Q Consensus 252 ~~~lVv~e~v~n~--~G~~~pL~~L~ela~k~ga~L-ivDeAh~~Gv 295 (334)
+..+++..++.+. .=...+|..|..|.++++..+ +.| |+.|.
T Consensus 161 ~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 161 CKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 3456665554442 223456899999999999888 777 88773
No 485
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=20.47 E-value=96 Score=24.42 Aligned_cols=23 Identities=26% Similarity=0.293 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCC-EEEEecCccc
Q 019931 271 MVELVKLRRKYGF-LLVLDDAHGT 293 (334)
Q Consensus 271 L~~L~ela~k~ga-~LivDeAh~~ 293 (334)
++.+.+..++++. +||+||+|..
T Consensus 76 ~~~~~~~l~~~~~~~lviDe~~~l 99 (131)
T PF13401_consen 76 RSLLIDALDRRRVVLLVIDEADHL 99 (131)
T ss_dssp HHHHHHHHHHCTEEEEEEETTHHH
T ss_pred HHHHHHHHHhcCCeEEEEeChHhc
Confidence 5677788888877 9999999985
No 486
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=20.28 E-value=5e+02 Score=21.48 Aligned_cols=54 Identities=22% Similarity=0.430 Sum_probs=36.0
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH----HHH-HHHHHHcCC-EEEEecCccc
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM----VEL-VKLRRKYGF-LLVLDDAHGT 293 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL----~~L-~ela~k~ga-~LivDeAh~~ 293 (334)
+.+.|.+++++. +...||+=-|.+++|...+. +++ .+|.+++++ +.++||-+++
T Consensus 42 ~~~~l~~~i~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 42 DWDRLEKLIKEW--QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred HHHHHHHHHHHh--CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 477888888764 45566666788899988773 222 334445555 5579998875
No 487
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=20.11 E-value=94 Score=32.19 Aligned_cols=26 Identities=27% Similarity=0.420 Sum_probs=20.1
Q ss_pred CCccCHHHHHHHHHHcCCEEEEecCc
Q 019931 266 GDFAPMVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 266 G~~~pL~~L~ela~k~ga~LivDeAh 291 (334)
|+..++++|++.|+++|+.||+|-+.
T Consensus 78 Gt~~d~~~lv~~~h~~gi~vilD~V~ 103 (551)
T PRK10933 78 GTLDDFDELVAQAKSRGIRIILDMVF 103 (551)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 45566888888888888888888763
No 488
>PF11814 DUF3335: Peptidase_C39 like family; InterPro: IPR021770 This family of proteins are functionally uncharacterised. This family is only found in bacteria. This presumed domain is typically between 226 to 230 amino acids in length.
Probab=20.08 E-value=6.5e+02 Score=22.69 Aligned_cols=34 Identities=29% Similarity=0.498 Sum_probs=22.6
Q ss_pred eeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC
Q 019931 234 YKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP 270 (334)
Q Consensus 234 ~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p 270 (334)
+...+.++|++.+.+ +..+|+.=+.|.++|...|
T Consensus 114 ~~~~~~~~l~~~l~~---G~~~lvLIS~y~~~g~k~P 147 (207)
T PF11814_consen 114 YRPLSLADLRAALAA---GAIVLVLISTYRMDGKKVP 147 (207)
T ss_pred cCCCCHHHHHHHHHC---CCEEEEEEeecccCCCCCC
Confidence 344567888888875 4455554467778887766
No 489
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=20.03 E-value=3.5e+02 Score=24.09 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=34.1
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
.+++.+++++. +.-+|.++...-+-- .++++|.+-.|+...++|.|-+
T Consensus 53 T~~ev~~l~~a---GadIIAlDaT~R~Rp--~~l~~li~~i~~~~~l~MADis 100 (192)
T PF04131_consen 53 TLKEVDALAEA---GADIIALDATDRPRP--ETLEELIREIKEKYQLVMADIS 100 (192)
T ss_dssp SHHHHHHHHHC---T-SEEEEE-SSSS-S--S-HHHHHHHHHHCTSEEEEE-S
T ss_pred CHHHHHHHHHc---CCCEEEEecCCCCCC--cCHHHHHHHHHHhCcEEeeecC
Confidence 67888888875 667888888665533 6788888878877799999964
Done!