Query 019931
Match_columns 334
No_of_seqs 322 out of 2233
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:14:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w8t_A SPT, serine palmitoyltr 100.0 1.9E-35 6.5E-40 289.2 26.1 210 107-334 62-276 (427)
2 3tqx_A 2-amino-3-ketobutyrate 100.0 3.6E-33 1.2E-37 267.9 24.5 247 4-334 4-258 (399)
3 3kki_A CAI-1 autoinducer synth 100.0 1.1E-33 3.8E-38 274.2 18.9 209 106-334 56-268 (409)
4 2bwn_A 5-aminolevulinate synth 100.0 2.9E-32 1E-36 263.0 26.1 212 107-334 44-260 (401)
5 1bs0_A Protein (8-amino-7-oxon 100.0 1.2E-30 4.1E-35 250.0 26.8 207 108-334 38-248 (384)
6 1fc4_A 2-amino-3-ketobutyrate 100.0 2.6E-30 9E-35 249.1 23.6 210 107-334 43-260 (401)
7 3a2b_A Serine palmitoyltransfe 100.0 1.9E-29 6.5E-34 243.1 25.2 209 108-334 42-255 (398)
8 3nra_A Aspartate aminotransfer 99.9 4.1E-26 1.4E-30 219.6 19.5 204 110-334 40-268 (407)
9 2oat_A Ornithine aminotransfer 99.9 8.9E-25 3E-29 215.0 21.5 219 103-334 70-307 (439)
10 3dxv_A Alpha-amino-epsilon-cap 99.9 7.7E-25 2.6E-29 214.1 18.6 212 104-333 38-283 (439)
11 1z7d_A Ornithine aminotransfer 99.9 2.8E-24 9.7E-29 210.9 22.2 218 104-334 60-296 (433)
12 3nx3_A Acoat, acetylornithine 99.9 3.8E-24 1.3E-28 206.0 19.7 213 104-334 31-262 (395)
13 3hmu_A Aminotransferase, class 99.9 5.6E-24 1.9E-28 211.5 18.7 218 104-333 50-306 (472)
14 2pb2_A Acetylornithine/succiny 99.9 9.5E-24 3.2E-28 206.1 20.0 213 104-333 52-283 (420)
15 3dod_A Adenosylmethionine-8-am 99.9 1.2E-23 4.1E-28 206.9 19.1 214 104-333 39-294 (448)
16 3i5t_A Aminotransferase; pyrid 99.9 1.4E-23 4.8E-28 208.8 19.5 217 104-334 49-306 (476)
17 4ao9_A Beta-phenylalanine amin 99.9 3.5E-24 1.2E-28 212.2 14.8 200 103-326 81-291 (454)
18 3gju_A Putative aminotransfera 99.9 8.5E-24 2.9E-28 208.8 16.4 218 104-333 46-304 (460)
19 3dzz_A Putative pyridoxal 5'-p 99.9 8.3E-23 2.8E-27 195.2 22.7 209 103-334 21-249 (391)
20 3k28_A Glutamate-1-semialdehyd 99.9 1.3E-23 4.4E-28 205.2 17.1 208 104-334 48-282 (429)
21 2ord_A Acoat, acetylornithine 99.9 1.8E-23 6.3E-28 201.3 17.8 207 105-333 36-265 (397)
22 3ruy_A Ornithine aminotransfer 99.9 4.4E-23 1.5E-27 198.1 20.2 214 105-334 32-266 (392)
23 3tfu_A Adenosylmethionine-8-am 99.9 7.5E-24 2.6E-28 209.7 14.7 217 104-333 67-317 (457)
24 3n5m_A Adenosylmethionine-8-am 99.9 6.9E-23 2.3E-27 201.3 20.5 214 104-333 44-298 (452)
25 3ly1_A Putative histidinol-pho 99.9 1.3E-22 4.4E-27 191.8 21.4 204 106-334 13-228 (354)
26 4a6r_A Omega transaminase; tra 99.9 9.6E-23 3.3E-27 201.2 20.7 219 104-334 45-303 (459)
27 3lws_A Aromatic amino acid bet 99.9 2.4E-24 8.3E-29 204.1 8.9 200 109-334 3-219 (357)
28 3l44_A Glutamate-1-semialdehyd 99.9 3.3E-23 1.1E-27 202.2 17.2 207 104-333 50-283 (434)
29 2epj_A Glutamate-1-semialdehyd 99.9 2.8E-23 9.6E-28 202.9 16.6 208 104-334 51-285 (434)
30 4adb_A Succinylornithine trans 99.9 1.1E-22 3.6E-27 195.9 19.3 213 104-334 34-266 (406)
31 4e77_A Glutamate-1-semialdehyd 99.9 2.3E-22 7.8E-27 196.2 21.5 208 104-334 48-282 (429)
32 3fq8_A Glutamate-1-semialdehyd 99.9 1.3E-22 4.5E-27 197.5 19.3 208 104-334 47-281 (427)
33 3oks_A 4-aminobutyrate transam 99.9 2.4E-22 8.2E-27 198.1 21.0 212 104-333 56-309 (451)
34 3i4j_A Aminotransferase, class 99.9 1.1E-22 3.7E-27 198.3 18.2 217 104-334 24-276 (430)
35 1sff_A 4-aminobutyrate aminotr 99.9 3E-22 1E-26 194.2 21.1 208 105-334 37-282 (426)
36 2yky_A Beta-transaminase; tran 99.8 3.5E-25 1.2E-29 220.2 0.0 205 103-333 94-313 (465)
37 3jtx_A Aminotransferase; NP_28 99.9 3.8E-22 1.3E-26 191.4 21.2 212 106-334 27-260 (396)
38 4ffc_A 4-aminobutyrate aminotr 99.9 1.7E-22 5.7E-27 199.5 19.1 208 104-333 59-307 (453)
39 2e7u_A Glutamate-1-semialdehyd 99.9 1.1E-22 3.8E-27 198.1 15.9 207 104-334 47-280 (424)
40 2z61_A Probable aspartate amin 99.9 1.6E-21 5.5E-26 185.8 23.5 198 108-334 28-237 (370)
41 2dou_A Probable N-succinyldiam 99.9 7.3E-22 2.5E-26 188.5 21.1 203 107-334 23-245 (376)
42 2eo5_A 419AA long hypothetical 99.9 9.4E-22 3.2E-26 191.6 22.1 209 105-333 38-295 (419)
43 1vef_A Acetylornithine/acetyl- 99.9 2E-22 6.7E-27 193.8 17.0 204 105-333 41-267 (395)
44 2cy8_A D-phgat, D-phenylglycin 99.9 2E-22 6.9E-27 198.0 16.8 208 104-334 52-283 (453)
45 3l8a_A METC, putative aminotra 99.9 6.6E-22 2.3E-26 192.4 20.3 205 104-333 54-282 (421)
46 3kax_A Aminotransferase, class 99.9 1.2E-21 4.1E-26 186.6 21.3 200 108-333 23-244 (383)
47 1ohv_A 4-aminobutyrate aminotr 99.9 7.3E-23 2.5E-27 203.4 13.2 224 103-332 57-338 (472)
48 1o4s_A Aspartate aminotransfer 99.9 1.9E-21 6.7E-26 187.0 22.7 201 107-334 39-261 (389)
49 1j32_A Aspartate aminotransfer 99.9 1.4E-21 4.9E-26 187.1 21.3 206 107-334 28-252 (388)
50 4dq6_A Putative pyridoxal phos 99.9 5.1E-22 1.7E-26 189.7 18.0 198 109-333 32-252 (391)
51 1s0a_A Adenosylmethionine-8-am 99.9 7.5E-22 2.6E-26 192.3 19.4 216 105-334 39-289 (429)
52 3fdb_A Beta C-S lyase, putativ 99.9 6.8E-22 2.3E-26 188.2 18.1 205 103-333 17-237 (377)
53 3piu_A 1-aminocyclopropane-1-c 99.9 1.1E-22 3.9E-27 198.4 12.8 191 125-333 52-287 (435)
54 3qgu_A LL-diaminopimelate amin 99.9 3.4E-22 1.2E-26 195.6 15.7 207 107-334 67-297 (449)
55 3a8u_X Omega-amino acid--pyruv 99.9 1.3E-21 4.5E-26 191.9 19.8 211 104-326 45-292 (449)
56 2rfv_A Methionine gamma-lyase; 99.9 1.8E-21 6E-26 188.2 20.1 184 125-334 39-226 (398)
57 3h14_A Aminotransferase, class 99.9 2.5E-21 8.4E-26 185.8 21.0 200 106-334 28-245 (391)
58 1v2d_A Glutamine aminotransfer 99.9 1.2E-21 4.2E-26 187.3 18.6 197 109-334 25-237 (381)
59 3ffh_A Histidinol-phosphate am 99.9 4.1E-21 1.4E-25 182.3 21.4 197 109-334 32-240 (363)
60 3ndn_A O-succinylhomoserine su 99.9 1.7E-21 5.9E-26 190.7 19.2 161 148-334 79-243 (414)
61 3ele_A Amino transferase; RER0 99.9 2.9E-21 9.9E-26 185.6 20.5 202 108-334 34-263 (398)
62 2a7v_A Serine hydroxymethyltra 99.9 1.5E-22 5.2E-27 202.4 11.8 192 113-334 59-279 (490)
63 2gb3_A Aspartate aminotransfer 99.9 3.8E-21 1.3E-25 186.2 20.6 198 107-334 41-259 (409)
64 3dyd_A Tyrosine aminotransfera 99.9 1.8E-21 6E-26 190.1 18.0 199 107-333 52-277 (427)
65 1eg5_A Aminotransferase; PLP-d 99.9 5.1E-21 1.8E-25 181.8 20.7 198 110-334 3-216 (384)
66 1zod_A DGD, 2,2-dialkylglycine 99.9 1.5E-21 5.2E-26 190.2 17.1 208 105-334 39-286 (433)
67 1e5e_A MGL, methionine gamma-l 99.9 4.1E-21 1.4E-25 186.8 20.2 156 149-334 61-225 (404)
68 3ei9_A LL-diaminopimelate amin 99.9 4.1E-22 1.4E-26 194.2 13.0 206 108-334 55-285 (432)
69 3g0t_A Putative aminotransfera 99.9 3.2E-21 1.1E-25 187.5 19.2 203 106-334 41-275 (437)
70 1gc0_A Methionine gamma-lyase; 99.9 2E-21 6.9E-26 188.1 17.7 161 148-334 63-227 (398)
71 1qgn_A Protein (cystathionine 99.9 1E-20 3.5E-25 187.0 22.9 160 149-334 113-277 (445)
72 2fq6_A Cystathionine beta-lyas 99.9 2E-21 6.8E-26 190.4 17.4 160 149-334 81-246 (415)
73 3ri6_A O-acetylhomoserine sulf 99.9 2.5E-21 8.5E-26 190.6 18.1 158 149-332 81-242 (430)
74 3ezs_A Aminotransferase ASPB; 99.9 2E-21 6.9E-26 185.0 17.0 208 106-334 21-246 (376)
75 1c7n_A Cystalysin; transferase 99.9 3.8E-21 1.3E-25 184.8 18.9 196 109-333 31-252 (399)
76 2cjg_A L-lysine-epsilon aminot 99.9 6.6E-22 2.3E-26 194.9 14.0 217 104-332 48-309 (449)
77 1d2f_A MALY protein; aminotran 99.9 1.5E-20 5.3E-25 180.2 23.1 195 109-333 28-247 (390)
78 3jzl_A Putative cystathionine 99.9 1.9E-21 6.4E-26 190.4 16.9 183 125-334 31-243 (409)
79 1gd9_A Aspartate aminotransfer 99.9 1.2E-20 4E-25 180.8 21.9 199 109-334 26-248 (389)
80 1t3i_A Probable cysteine desul 99.9 9.2E-21 3.1E-25 182.4 21.1 196 108-334 26-244 (420)
81 1xi9_A Putative transaminase; 99.9 7.5E-21 2.6E-25 183.8 20.3 198 107-332 36-258 (406)
82 1kmj_A Selenocysteine lyase; p 99.9 3.6E-21 1.2E-25 184.2 17.9 200 108-334 21-239 (406)
83 3e2y_A Kynurenine-oxoglutarate 99.9 4.8E-21 1.7E-25 184.5 18.9 200 109-334 23-255 (410)
84 2x5d_A Probable aminotransfera 99.9 1.2E-20 4E-25 182.8 21.6 201 107-334 35-260 (412)
85 3fvs_A Kynurenine--oxoglutarat 99.9 4.2E-21 1.4E-25 185.8 18.5 204 109-334 28-262 (422)
86 3i16_A Aluminum resistance pro 99.9 4.5E-21 1.5E-25 188.7 18.8 185 125-334 45-260 (427)
87 1yiz_A Kynurenine aminotransfe 99.9 1.3E-20 4.5E-25 183.1 21.8 202 109-334 37-270 (429)
88 3get_A Histidinol-phosphate am 99.9 4.1E-21 1.4E-25 182.4 17.7 198 109-334 30-242 (365)
89 1u08_A Hypothetical aminotrans 99.9 8.9E-21 3E-25 181.6 20.1 202 109-334 30-251 (386)
90 3t18_A Aminotransferase class 99.9 6.3E-21 2.2E-25 184.5 19.1 206 108-333 36-275 (413)
91 3hvy_A Cystathionine beta-lyas 99.9 4.9E-21 1.7E-25 188.4 18.5 184 126-334 47-260 (427)
92 2o0r_A RV0858C (N-succinyldiam 99.9 1.6E-20 5.3E-25 181.8 21.6 201 110-334 26-248 (411)
93 3lvm_A Cysteine desulfurase; s 99.9 1.1E-20 3.6E-25 182.8 20.4 198 109-333 23-237 (423)
94 2ctz_A O-acetyl-L-homoserine s 99.9 1.1E-20 3.8E-25 184.7 20.5 159 149-333 57-221 (421)
95 3qhx_A Cystathionine gamma-syn 99.9 1.1E-20 3.8E-25 183.1 20.0 160 149-334 65-228 (392)
96 3f9t_A TDC, L-tyrosine decarbo 99.9 2.8E-20 9.7E-25 176.9 22.1 207 113-326 28-250 (397)
97 2zc0_A Alanine glyoxylate tran 99.9 8.4E-21 2.9E-25 182.9 18.4 206 108-334 33-261 (407)
98 3ou5_A Serine hydroxymethyltra 99.9 3.1E-22 1E-26 195.6 7.6 217 8-334 35-279 (490)
99 3acz_A Methionine gamma-lyase; 99.9 1.7E-20 5.9E-25 181.3 19.8 160 149-334 58-221 (389)
100 1b5p_A Protein (aspartate amin 99.9 4.2E-20 1.4E-24 177.4 22.2 202 108-334 30-249 (385)
101 4hvk_A Probable cysteine desul 99.9 9.6E-21 3.3E-25 179.3 17.1 191 111-333 3-211 (382)
102 2o1b_A Aminotransferase, class 99.9 1.5E-20 5.2E-25 182.0 18.7 200 108-334 46-268 (404)
103 3vax_A Putative uncharacterize 99.9 9.8E-21 3.3E-25 181.5 17.1 194 108-332 20-231 (400)
104 3hdo_A Histidinol-phosphate am 99.9 6.7E-21 2.3E-25 181.0 15.3 201 107-334 24-229 (360)
105 4eb5_A Probable cysteine desul 99.9 9E-21 3.1E-25 180.2 16.1 192 111-333 3-211 (382)
106 2cb1_A O-acetyl homoserine sul 99.9 2.9E-20 1E-24 180.9 20.0 184 120-333 30-217 (412)
107 3b46_A Aminotransferase BNA3; 99.8 1.5E-20 5E-25 184.8 17.9 203 108-333 56-288 (447)
108 3op7_A Aminotransferase class 99.8 3.9E-21 1.3E-25 183.2 13.2 192 110-334 28-237 (375)
109 2eh6_A Acoat, acetylornithine 99.8 1.7E-20 5.9E-25 178.5 17.1 205 105-333 24-254 (375)
110 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 1.8E-20 6.1E-25 177.7 17.1 185 124-334 21-223 (371)
111 4atq_A 4-aminobutyrate transam 99.8 3.1E-20 1.1E-24 184.1 19.5 205 103-326 58-299 (456)
112 1bw0_A TAT, protein (tyrosine 99.8 2.3E-20 7.7E-25 180.6 17.6 200 109-333 33-267 (416)
113 1jg8_A L-ALLO-threonine aldola 99.8 1.3E-20 4.5E-25 177.5 15.5 197 109-333 3-215 (347)
114 1cs1_A CGS, protein (cystathio 99.8 6.5E-20 2.2E-24 176.3 20.5 160 149-334 51-214 (386)
115 1lc5_A COBD, L-threonine-O-3-p 99.8 7.8E-20 2.7E-24 173.9 20.5 198 106-332 21-229 (364)
116 3cai_A Possible aminotransfera 99.8 5.2E-20 1.8E-24 177.0 19.5 200 109-334 27-240 (406)
117 3ht4_A Aluminum resistance pro 99.8 4.4E-21 1.5E-25 188.9 12.1 196 114-334 26-249 (431)
118 4a0g_A Adenosylmethionine-8-am 99.8 2E-21 6.8E-26 205.3 10.2 219 103-333 370-678 (831)
119 3cq5_A Histidinol-phosphate am 99.8 6.8E-20 2.3E-24 174.8 18.9 196 112-334 33-246 (369)
120 3nmy_A Xometc, cystathionine g 99.8 4.1E-20 1.4E-24 180.1 17.3 157 149-332 66-228 (400)
121 1pff_A Methionine gamma-lyase; 99.8 2.4E-20 8.3E-25 175.0 14.9 155 154-334 2-161 (331)
122 3cog_A Cystathionine gamma-lya 99.8 6.8E-20 2.3E-24 178.4 18.2 158 149-333 66-228 (403)
123 2q7w_A Aspartate aminotransfer 99.8 4.4E-20 1.5E-24 176.9 16.6 206 108-333 25-260 (396)
124 4eu1_A Mitochondrial aspartate 99.8 6.6E-20 2.3E-24 177.3 17.6 203 109-331 41-270 (409)
125 1n8p_A Cystathionine gamma-lya 99.8 4.8E-20 1.6E-24 178.8 16.0 157 149-333 54-218 (393)
126 3rq1_A Aminotransferase class 99.8 1.1E-19 3.8E-24 176.0 18.4 206 108-333 37-276 (418)
127 3mad_A Sphingosine-1-phosphate 99.8 1.8E-19 6.3E-24 180.1 20.3 209 112-333 94-325 (514)
128 2dr1_A PH1308 protein, 386AA l 99.8 1.3E-19 4.3E-24 172.5 18.1 179 124-334 31-222 (386)
129 3frk_A QDTB; aminotransferase, 99.8 4.4E-20 1.5E-24 176.2 14.5 173 125-333 16-199 (373)
130 3fsl_A Aromatic-amino-acid ami 99.8 3.8E-19 1.3E-23 170.5 20.7 205 109-332 26-260 (397)
131 4e3q_A Pyruvate transaminase; 99.8 3.8E-19 1.3E-23 177.1 21.3 212 103-326 61-309 (473)
132 4f4e_A Aromatic-amino-acid ami 99.8 2.8E-19 9.5E-24 173.8 19.8 205 109-332 49-282 (420)
133 7aat_A Aspartate aminotransfer 99.8 2.3E-19 8E-24 172.6 18.9 209 110-333 29-264 (401)
134 3aow_A Putative uncharacterize 99.8 1.1E-19 3.6E-24 179.2 16.7 204 109-334 76-303 (448)
135 3euc_A Histidinol-phosphate am 99.8 1.4E-19 4.9E-24 171.9 16.9 194 109-334 30-241 (367)
136 1vp4_A Aminotransferase, putat 99.8 5.1E-20 1.7E-24 179.3 14.1 201 109-334 43-274 (425)
137 2ay1_A Aroat, aromatic amino a 99.8 6.1E-20 2.1E-24 176.1 14.2 205 109-333 26-257 (394)
138 3ftb_A Histidinol-phosphate am 99.8 1.5E-19 5E-24 171.0 16.0 192 107-332 24-228 (361)
139 3ecd_A Serine hydroxymethyltra 99.8 2E-19 6.7E-24 173.6 16.9 198 110-334 33-248 (425)
140 1ajs_A Aspartate aminotransfer 99.8 2.7E-19 9.2E-24 172.8 17.7 202 108-333 29-272 (412)
141 2zyj_A Alpha-aminodipate amino 99.8 3.2E-20 1.1E-24 178.6 11.2 202 109-334 32-252 (397)
142 1yaa_A Aspartate aminotransfer 99.8 5E-19 1.7E-23 171.1 19.5 203 108-332 28-267 (412)
143 1v72_A Aldolase; PLP-dependent 99.8 1.5E-19 5.2E-24 170.1 15.3 201 109-333 7-224 (356)
144 1vjo_A Alanine--glyoxylate ami 99.8 2.7E-19 9.3E-24 171.3 17.1 190 109-334 34-235 (393)
145 3h7f_A Serine hydroxymethyltra 99.8 1.4E-19 4.8E-24 178.0 14.7 198 110-334 46-261 (447)
146 3n0l_A Serine hydroxymethyltra 99.8 3.8E-19 1.3E-23 171.4 17.3 197 110-334 26-240 (417)
147 3p1t_A Putative histidinol-pho 99.8 8.3E-19 2.8E-23 164.3 19.0 187 109-334 16-213 (337)
148 3b1d_A Betac-S lyase; HET: PLP 99.7 1.5E-21 5E-26 187.9 0.0 202 104-333 24-252 (392)
149 1elu_A L-cysteine/L-cystine C- 99.8 5.4E-19 1.9E-23 168.3 17.5 196 112-334 18-234 (390)
150 3gbx_A Serine hydroxymethyltra 99.8 2.8E-19 9.5E-24 172.3 15.6 197 111-334 33-245 (420)
151 1ibj_A CBL, cystathionine beta 99.8 8E-19 2.7E-23 174.3 19.0 195 110-334 90-294 (464)
152 1m32_A 2-aminoethylphosphonate 99.8 4.2E-19 1.4E-23 167.2 16.1 189 110-333 4-206 (366)
153 3zrp_A Serine-pyruvate aminotr 99.8 3.3E-19 1.1E-23 169.3 15.3 177 124-334 13-203 (384)
154 1svv_A Threonine aldolase; str 99.8 1E-18 3.4E-23 164.4 18.2 200 109-333 13-228 (359)
155 1rv3_A Serine hydroxymethyltra 99.8 1.7E-19 5.8E-24 179.6 13.0 195 110-334 45-269 (483)
156 2x5f_A Aspartate_tyrosine_phen 99.8 1.8E-19 6.1E-24 175.3 12.9 202 109-333 47-285 (430)
157 1ax4_A Tryptophanase; tryptoph 99.8 6.1E-19 2.1E-23 173.2 16.7 201 107-334 41-279 (467)
158 3a9z_A Selenocysteine lyase; P 99.8 1.2E-18 4E-23 169.3 18.2 209 108-334 18-259 (432)
159 3fkd_A L-threonine-O-3-phospha 99.8 1.8E-18 6.1E-23 163.4 18.6 194 106-334 12-212 (350)
160 1qz9_A Kynureninase; kynurenin 99.8 1.9E-18 6.5E-23 166.6 18.8 195 109-334 29-242 (416)
161 1b9h_A AHBA synthase, protein 99.8 8.9E-19 3.1E-23 167.8 16.1 175 125-334 16-201 (388)
162 2z9v_A Aspartate aminotransfer 99.8 1.1E-18 3.7E-23 166.8 16.6 193 109-334 9-210 (392)
163 3nnk_A Ureidoglycine-glyoxylat 99.8 1.8E-18 6E-23 166.2 17.0 177 124-333 24-213 (411)
164 2huf_A Alanine glyoxylate amin 99.8 2E-18 6.9E-23 165.0 16.9 182 122-334 28-220 (393)
165 3n75_A LDC, lysine decarboxyla 99.8 7.5E-19 2.6E-23 182.3 14.8 160 150-333 195-380 (715)
166 1iay_A ACC synthase 2, 1-amino 99.8 1.3E-18 4.3E-23 169.2 15.5 202 109-333 36-282 (428)
167 3isl_A Purine catabolism prote 99.8 2.2E-18 7.7E-23 165.7 17.0 177 124-333 22-211 (416)
168 3meb_A Aspartate aminotransfer 99.8 2.2E-18 7.6E-23 169.5 17.0 200 110-331 50-289 (448)
169 3asa_A LL-diaminopimelate amin 99.8 9.2E-19 3.2E-23 168.9 14.0 202 108-334 32-251 (400)
170 3nyt_A Aminotransferase WBPE; 99.8 1.2E-18 4E-23 166.3 14.3 155 148-333 33-198 (367)
171 2vi8_A Serine hydroxymethyltra 99.8 9.3E-19 3.2E-23 168.0 13.0 196 109-334 24-239 (405)
172 2ez2_A Beta-tyrosinase, tyrosi 99.8 4.9E-18 1.7E-22 166.4 18.2 197 107-333 40-269 (456)
173 2c81_A Glutamine-2-deoxy-scyll 99.8 4E-18 1.4E-22 165.3 17.4 177 125-333 15-204 (418)
174 1iug_A Putative aspartate amin 99.8 3.1E-18 1.1E-22 160.8 15.9 175 124-333 12-198 (352)
175 3uwc_A Nucleotide-sugar aminot 99.8 2.6E-18 8.8E-23 163.4 15.3 170 128-333 21-200 (374)
176 3f6t_A Aspartate aminotransfer 99.8 5.1E-19 1.8E-23 178.3 10.7 202 109-333 103-327 (533)
177 2aeu_A Hypothetical protein MJ 99.8 3.1E-18 1.1E-22 164.7 15.7 184 110-334 29-221 (374)
178 2oga_A Transaminase; PLP-depen 99.8 1.6E-18 5.5E-23 167.3 13.6 186 109-333 30-226 (399)
179 2oqx_A Tryptophanase; lyase, p 99.8 1E-18 3.5E-23 171.6 12.1 208 107-334 39-279 (467)
180 2fnu_A Aminotransferase; prote 99.8 7.6E-18 2.6E-22 159.8 17.5 173 124-332 11-194 (375)
181 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 6.6E-18 2.3E-22 165.2 16.9 195 108-334 30-233 (437)
182 2po3_A 4-dehydrase; external a 99.8 9.8E-18 3.4E-22 163.1 17.4 183 113-334 20-213 (424)
183 1mdo_A ARNB aminotransferase; 99.8 6.5E-18 2.2E-22 161.7 15.8 182 110-333 9-200 (393)
184 3kgw_A Alanine-glyoxylate amin 99.8 5.7E-18 1.9E-22 161.2 15.2 177 124-333 34-223 (393)
185 2r2n_A Kynurenine/alpha-aminoa 99.8 3.1E-17 1.1E-21 159.7 20.3 170 145-334 77-277 (425)
186 2dkj_A Serine hydroxymethyltra 99.8 3.8E-18 1.3E-22 163.8 13.2 196 109-334 23-239 (407)
187 3dr4_A Putative perosamine syn 99.8 1E-17 3.5E-22 160.7 16.1 174 125-333 35-218 (391)
188 3pj0_A LMO0305 protein; struct 99.8 2.1E-18 7.1E-23 163.1 11.1 182 125-334 28-221 (359)
189 2bkw_A Alanine-glyoxylate amin 99.8 1.4E-17 4.7E-22 158.3 16.5 189 110-334 5-215 (385)
190 2qma_A Diaminobutyrate-pyruvat 99.8 2.8E-17 9.7E-22 163.6 19.3 207 111-326 95-329 (497)
191 3tcm_A Alanine aminotransferas 99.8 6.5E-17 2.2E-21 161.5 21.8 191 125-333 108-332 (500)
192 3mc6_A Sphingosine-1-phosphate 99.7 1.2E-17 4E-22 165.9 15.5 208 113-333 63-293 (497)
193 3ihj_A Alanine aminotransferas 99.7 4.6E-17 1.6E-21 162.7 19.8 180 139-332 122-330 (498)
194 3e9k_A Kynureninase; kynurenin 99.7 1.5E-17 5.1E-22 163.8 16.0 203 109-333 66-290 (465)
195 3ju7_A Putative PLP-dependent 99.7 2.5E-17 8.5E-22 158.9 16.7 178 122-333 12-203 (377)
196 1fg7_A Histidinol phosphate am 99.7 3.6E-17 1.2E-21 155.7 17.5 188 109-334 29-229 (356)
197 3f0h_A Aminotransferase; RER07 99.7 1.8E-17 6E-22 157.5 14.5 188 110-333 19-219 (376)
198 1wyu_B Glycine dehydrogenase s 99.7 7.1E-17 2.4E-21 160.0 19.4 191 124-334 78-285 (474)
199 3b8x_A WBDK, pyridoxamine 5-ph 99.7 6E-17 2E-21 155.5 18.0 182 124-334 13-203 (390)
200 2ch1_A 3-hydroxykynurenine tra 99.7 3.9E-17 1.3E-21 156.2 16.5 177 124-333 29-218 (396)
201 2yrr_A Aminotransferase, class 99.7 2.2E-17 7.5E-22 154.6 14.0 178 123-334 10-200 (353)
202 1o69_A Aminotransferase; struc 99.7 6E-17 2.1E-21 156.2 17.3 158 150-333 32-196 (394)
203 1c4k_A Protein (ornithine deca 99.7 1.6E-17 5.5E-22 173.1 13.8 166 146-331 169-366 (730)
204 3vp6_A Glutamate decarboxylase 99.7 2.2E-16 7.4E-21 158.4 20.7 168 150-326 131-320 (511)
205 3ez1_A Aminotransferase MOCR f 99.7 2.1E-17 7.1E-22 160.2 11.5 213 110-334 26-267 (423)
206 1uu1_A Histidinol-phosphate am 99.7 2E-16 6.8E-21 148.8 17.5 186 109-334 19-217 (335)
207 3ffr_A Phosphoserine aminotran 99.7 8.1E-17 2.8E-21 151.5 14.8 188 109-333 3-204 (362)
208 3ppl_A Aspartate aminotransfer 99.7 1.7E-17 5.7E-22 161.4 10.4 172 152-334 80-274 (427)
209 3hbx_A GAD 1, glutamate decarb 99.7 2.6E-16 9E-21 157.4 18.5 191 122-326 66-281 (502)
210 2dgk_A GAD-beta, GADB, glutama 99.7 5.2E-16 1.8E-20 152.5 19.7 200 119-333 49-275 (452)
211 4e1o_A HDC, histidine decarbox 99.7 8.7E-16 3E-20 152.6 21.2 171 149-326 113-313 (481)
212 3if2_A Aminotransferase; YP_26 99.7 7E-17 2.4E-21 157.5 12.2 165 152-334 85-290 (444)
213 2jis_A Cysteine sulfinic acid 99.7 1.8E-15 6.3E-20 151.4 22.2 176 148-333 146-340 (515)
214 2vyc_A Biodegradative arginine 99.7 7.1E-16 2.4E-20 161.5 18.1 167 148-333 203-399 (755)
215 3k40_A Aromatic-L-amino-acid d 99.7 1.6E-15 5.4E-20 150.7 19.5 203 113-326 70-306 (475)
216 1w23_A Phosphoserine aminotran 99.7 5.5E-17 1.9E-21 153.2 8.4 187 109-333 2-208 (360)
217 3d6k_A Putative aminotransfera 99.7 2.3E-16 7.7E-21 153.5 12.3 208 111-334 34-272 (422)
218 2okj_A Glutamate decarboxylase 99.7 4.8E-15 1.6E-19 147.7 21.1 172 152-333 134-326 (504)
219 1js3_A DDC;, DOPA decarboxylas 99.7 4E-15 1.4E-19 147.5 19.9 170 154-333 117-316 (486)
220 3k7y_A Aspartate aminotransfer 99.6 1.1E-14 3.8E-19 141.9 20.6 204 109-332 29-262 (405)
221 2z67_A O-phosphoseryl-tRNA(SEC 99.6 1.8E-15 6.2E-20 149.2 15.2 166 149-333 132-311 (456)
222 3g7q_A Valine-pyruvate aminotr 99.6 1E-15 3.6E-20 147.4 12.1 207 109-334 31-264 (417)
223 2x3l_A ORN/Lys/Arg decarboxyla 99.6 1.3E-15 4.4E-20 150.1 12.2 155 149-333 56-224 (446)
224 2c0r_A PSAT, phosphoserine ami 99.6 2.4E-15 8.3E-20 142.5 12.9 172 122-333 13-209 (362)
225 3ke3_A Putative serine-pyruvat 99.6 1.1E-14 3.9E-19 139.5 16.4 157 150-333 35-212 (379)
226 2zy4_A L-aspartate beta-decarb 99.6 3.7E-15 1.3E-19 150.8 11.9 201 111-333 106-329 (546)
227 3bwn_A AT1G70560, L-tryptophan 99.6 2.6E-15 8.8E-20 145.0 6.3 188 108-333 21-231 (391)
228 1wyu_A Glycine dehydrogenase ( 99.5 1.1E-13 3.7E-18 135.4 14.8 160 144-334 102-275 (438)
229 4h51_A Aspartate aminotransfer 99.4 5.2E-12 1.8E-16 123.7 19.1 207 109-333 44-279 (420)
230 2hox_A ALLIIN lyase 1; cystein 99.4 1.1E-13 3.6E-18 135.6 5.6 186 109-333 56-265 (427)
231 2fyf_A PSAT, phosphoserine ami 99.4 8.3E-14 2.8E-18 134.0 4.1 184 111-333 41-235 (398)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.4 5.1E-12 1.7E-16 124.5 14.8 164 150-331 98-276 (450)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.3 1.4E-11 4.7E-16 121.1 12.9 148 168-332 137-295 (501)
234 3e77_A Phosphoserine aminotran 99.2 7.1E-11 2.4E-15 114.1 10.2 184 117-332 17-218 (377)
235 3qm2_A Phosphoserine aminotran 99.1 8.6E-11 3E-15 113.9 5.0 174 124-332 38-233 (386)
236 3m5u_A Phosphoserine aminotran 98.9 3.4E-09 1.2E-13 101.7 9.5 181 109-332 4-205 (361)
237 1tks_A 3,4-dihydroxy-2-butanon 71.6 4.5 0.00015 35.1 4.7 35 252-286 159-193 (204)
238 1vhx_A Putative holliday junct 66.8 8.9 0.0003 31.3 5.4 55 237-293 42-102 (150)
239 3mio_A DHBP synthase, 3,4-dihy 61.8 11 0.00038 32.6 5.2 35 252-286 158-193 (206)
240 1g57_A DHBP synthase, 3,4-dihy 58.6 14 0.00046 32.4 5.3 34 252-286 167-200 (217)
241 1snn_A DHBP synthase, 3,4-dihy 55.8 13 0.00043 32.8 4.6 35 252-287 178-212 (227)
242 1k4i_A 3,4-dihydroxy-2-butanon 43.5 21 0.00073 31.4 4.1 35 252-287 167-212 (233)
243 4gqr_A Pancreatic alpha-amylas 43.5 13 0.00044 35.4 3.0 32 261-292 69-100 (496)
244 3ghf_A Septum site-determining 42.4 86 0.0029 24.3 7.2 55 228-286 16-78 (120)
245 3bh4_A Alpha-amylase; calcium, 36.4 21 0.00071 34.4 3.2 32 261-292 71-102 (483)
246 1g94_A Alpha-amylase; beta-alp 36.0 20 0.00068 34.2 3.0 32 261-292 57-88 (448)
247 1wpc_A Glucan 1,4-alpha-maltoh 35.4 22 0.00074 34.3 3.2 32 261-292 75-106 (485)
248 1iv0_A Hypothetical protein; r 35.3 74 0.0025 23.8 5.5 52 238-292 39-96 (98)
249 1ud2_A Amylase, alpha-amylase; 34.7 23 0.00077 34.1 3.2 32 261-292 73-104 (480)
250 1hvx_A Alpha-amylase; hydrolas 34.1 23 0.00079 34.5 3.2 32 261-292 74-105 (515)
251 1lwj_A 4-alpha-glucanotransfer 33.5 21 0.00073 33.9 2.7 29 264-292 65-93 (441)
252 4aie_A Glucan 1,6-alpha-glucos 31.2 24 0.00083 34.1 2.7 28 265-292 76-103 (549)
253 1mxg_A Alpha amylase; hyperthe 31.1 28 0.00097 33.1 3.2 32 261-292 79-110 (435)
254 1gcy_A Glucan 1,4-alpha-maltot 31.0 29 0.00098 34.0 3.3 30 263-292 87-116 (527)
255 1zco_A 2-dehydro-3-deoxyphosph 29.5 83 0.0029 27.9 5.8 57 238-294 142-204 (262)
256 2guy_A Alpha-amylase A; (beta- 28.7 28 0.00097 33.3 2.7 29 264-292 93-121 (478)
257 1vs1_A 3-deoxy-7-phosphoheptul 27.9 65 0.0022 28.9 4.8 57 238-294 157-219 (276)
258 1ht6_A AMY1, alpha-amylase iso 27.9 30 0.001 32.5 2.7 29 264-292 64-92 (405)
259 3vup_A Beta-1,4-mannanase; TIM 27.3 38 0.0013 29.6 3.1 21 269-289 90-110 (351)
260 1zja_A Trehalulose synthase; s 27.1 31 0.0011 33.9 2.7 29 264-292 75-103 (557)
261 3dhu_A Alpha-amylase; structur 27.0 29 0.001 32.9 2.5 28 265-292 80-107 (449)
262 1nu0_A Hypothetical protein YQ 26.8 52 0.0018 26.3 3.6 54 238-293 41-100 (138)
263 2dh2_A 4F2 cell-surface antige 25.1 30 0.001 32.9 2.1 26 266-291 79-104 (424)
264 1jae_A Alpha-amylase; glycosid 25.0 26 0.00089 33.7 1.7 32 261-292 67-98 (471)
265 3cf4_G Acetyl-COA decarboxylas 25.0 57 0.0019 26.7 3.6 45 238-287 23-67 (170)
266 1qho_A Alpha-amylase; glycosid 24.7 36 0.0012 34.5 2.7 29 264-292 103-131 (686)
267 1d3c_A Cyclodextrin glycosyltr 24.6 36 0.0012 34.5 2.7 29 264-292 111-139 (686)
268 1cyg_A Cyclodextrin glucanotra 24.5 36 0.0012 34.4 2.7 29 264-292 107-135 (680)
269 2aaa_A Alpha-amylase; glycosid 24.4 34 0.0012 32.8 2.4 29 264-292 93-121 (484)
270 3bc9_A AMYB, alpha amylase, ca 24.1 40 0.0014 33.7 2.9 32 261-292 201-232 (599)
271 2z1k_A (NEO)pullulanase; hydro 24.1 29 0.00099 33.2 1.8 28 265-292 93-120 (475)
272 1wza_A Alpha-amylase A; hydrol 23.8 40 0.0014 32.4 2.8 28 265-292 78-105 (488)
273 3io5_A Recombination and repai 23.5 4.3E+02 0.015 24.2 11.0 66 230-295 84-176 (333)
274 3up8_A Putative 2,5-diketo-D-g 23.3 2.5E+02 0.0085 25.0 7.9 86 204-294 123-212 (298)
275 1m53_A Isomaltulose synthase; 23.3 30 0.001 34.2 1.8 28 265-292 89-116 (570)
276 2wc7_A Alpha amylase, catalyti 23.2 27 0.00091 33.7 1.3 28 265-292 99-126 (488)
277 3bmv_A Cyclomaltodextrin gluca 23.0 41 0.0014 34.1 2.7 29 264-292 112-140 (683)
278 3edf_A FSPCMD, cyclomaltodextr 22.8 42 0.0014 33.4 2.7 29 264-292 194-222 (601)
279 1g5a_A Amylosucrase; glycosylt 22.8 47 0.0016 33.3 3.1 28 265-292 159-186 (628)
280 3aj7_A Oligo-1,6-glucosidase; 22.7 42 0.0014 33.3 2.7 28 265-292 84-111 (589)
281 3nvt_A 3-deoxy-D-arabino-heptu 22.6 1.6E+02 0.0055 27.7 6.6 58 237-294 260-323 (385)
282 1j0h_A Neopullulanase; beta-al 22.3 43 0.0015 33.2 2.7 29 264-292 218-246 (588)
283 1uok_A Oligo-1,6-glucosidase; 22.1 33 0.0011 33.8 1.8 28 265-292 75-102 (558)
284 3ln3_A Dihydrodiol dehydrogena 21.8 2E+02 0.0067 25.8 7.0 62 229-293 161-222 (324)
285 3pzt_A Endoglucanase; alpha/be 21.2 54 0.0019 29.8 3.0 23 269-292 105-127 (327)
286 2ze0_A Alpha-glucosidase; TIM 21.0 36 0.0012 33.5 1.8 28 265-292 75-102 (555)
287 3nl6_A Thiamine biosynthetic b 20.9 84 0.0029 31.1 4.4 19 271-289 58-76 (540)
288 3kts_A Glycerol uptake operon 20.8 1.1E+02 0.0038 25.9 4.6 49 236-292 16-66 (192)
289 1wzl_A Alpha-amylase II; pullu 20.7 46 0.0016 33.0 2.5 29 264-292 215-243 (585)
290 2zic_A Dextran glucosidase; TI 20.6 34 0.0012 33.6 1.5 28 265-292 75-102 (543)
291 1ea9_C Cyclomaltodextrinase; h 20.4 52 0.0018 32.6 2.8 29 264-292 214-242 (583)
No 1
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.9e-35 Score=289.24 Aligned_cols=210 Identities=31% Similarity=0.513 Sum_probs=190.3
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
+|+++|||++|+|||+..||.+++++. +++.+.++++...|..+.+.+|+++|++++|.+.+++++||++||..++
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al 141 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGII 141 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHH
Confidence 459999999999999989999999653 4677777889999988999999999999999999999999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCC-CcEEEEEcCC
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTM-RKKVVVTDSL 261 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~-~~~lVv~e~v 261 (334)
.++.++ +|.|+++.++|.++..++++. +++++.++++|+++|++++++... ++++|+++++
T Consensus 142 ~~l~~~--------------gd~vl~~~~~h~~~~~~~~~~----g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 142 STLAGK--------------GEYVILDADSHASIYDGCQQG----NAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp HHHSCT--------------TCEEEEETTCCHHHHHHHHHS----CSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred HHhcCC--------------CCEEEECCcccHHHHHHHHHc----CCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 987654 889999999999999999887 899999999999999999986433 6899999999
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
+||+|.+.|+++|+++|++||++||+||+|+.|+++++|.++.+++++.+++||+++||||+||+.|||++++
T Consensus 204 ~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~gG~v~~~ 276 (427)
T 2w8t_A 204 YSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVGGFVVSN 276 (427)
T ss_dssp ETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCCEEEEEC
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCCCEEEeC
Confidence 9999999999999999999999999999999999988888887778887888999999999999999999874
No 2
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.6e-33 Score=267.94 Aligned_cols=247 Identities=34% Similarity=0.500 Sum_probs=212.2
Q ss_pred hhhHHHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCC
Q 019931 4 SSLWDKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPS 83 (334)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (334)
|..+.+++..+++++++++++|...++....+. |+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----------------------------------------~v~~--- 40 (399)
T 3tqx_A 4 MQEILSQLNKEIEGLKKAGLYKSERIITSPQNA----------------------------------------EIKV--- 40 (399)
T ss_dssp CHHHHHHHHHHHHHHHTTTCCCCCCCBCSCSSS----------------------------------------EEEE---
T ss_pred hHhHHHHHHHHHHHHHHcCCccccccccCCCCc----------------------------------------eEee---
Confidence 445778899999999999999988776543332 2222
Q ss_pred CCCCcceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHHHH----HHhcCCCCccccccCchHHHHHHHHHH
Q 019931 84 SGDENEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAKAA----ARHGMGPRGSALICGYTNYHRLLESCL 159 (334)
Q Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~----~~~g~g~~~sr~~~G~~~~~~~LE~~L 159 (334)
+|++||||++|+|+|+..+|.+++++ .+++.+.+.+++..|..+.+.++++++
T Consensus 41 -----------------------~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l 97 (399)
T 3tqx_A 41 -----------------------GEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDI 97 (399)
T ss_dssp -----------------------TTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHH
T ss_pred -----------------------CCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHH
Confidence 34999999999999998899998854 456777777888889899999999999
Q ss_pred HhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCH
Q 019931 160 ADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDM 239 (334)
Q Consensus 160 a~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~ 239 (334)
++++|.+..+++++|++|+..++.+++++ +|.|+++.+.|.++..+++.. +.+++.+++.|+
T Consensus 98 a~~~~~~~~i~~~sGt~a~~~~l~~~~~~--------------gd~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~d~ 159 (399)
T 3tqx_A 98 SEFLGTDDTILYSSCFDANGGLFETLLGP--------------EDAIISDELNHASIIDGIRLC----KAQRYRYKNNAM 159 (399)
T ss_dssp HHHHTCSEEEEESCHHHHHHTTHHHHCCT--------------TCEEEEETTCCHHHHHHHHSC----CSEEEEECTTCT
T ss_pred HHHHCCCcEEEECchHHHHHHHHHHhcCC--------------CCEEEECCcccHHHHHHHHHc----CCceeEeCCCCH
Confidence 99999999999999999999999887764 889999999999999888877 889999999999
Q ss_pred HHHHHHHhcCCC---CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEE
Q 019931 240 SHLKTLLSCCTM---RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDIC 316 (334)
Q Consensus 240 ~~Le~~l~~~~~---~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div 316 (334)
++|++++++... ++++|++++++||+|.+.|+++|.++|++||++||+||+|+.|++++++.+..+.+++.++.||+
T Consensus 160 ~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~ 239 (399)
T 3tqx_A 160 GDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDIL 239 (399)
T ss_dssp THHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEE
T ss_pred HHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEE
Confidence 999999986432 68999999999999999999999999999999999999999888888777776677765667899
Q ss_pred EecCccccc-CCccEEeeC
Q 019931 317 VGTLSKAAG-CQGGFIACR 334 (334)
Q Consensus 317 ~~SlsKa~G-~~GG~i~~~ 334 (334)
++||||+|| ..|||++++
T Consensus 240 ~~s~sK~~~g~~gG~~~~~ 258 (399)
T 3tqx_A 240 TGTLGKALGGASGGYTSGH 258 (399)
T ss_dssp EEESSSSSCSSCCEEEEEC
T ss_pred EecchHhcccCceEEEEcC
Confidence 999999998 889999874
No 3
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=1.1e-33 Score=274.21 Aligned_cols=209 Identities=26% Similarity=0.469 Sum_probs=188.5
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~a 181 (334)
.+|++|+||+||+|||+..||.+++++. +|+.+.++++...|+.+.++++++++++++|.+.++++++|++||..+
T Consensus 56 ~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~ 135 (409)
T 3kki_A 56 QASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGL 135 (409)
T ss_dssp CCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHH
T ss_pred CCCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHH
Confidence 4679999999999999999999999654 456677778889998888899999999999999999999999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++++.++ +|.|+++.++|.++..++++. +++++.++++|+++|++++++. ++++|+++++
T Consensus 136 l~~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~~le~~l~~~--~~~~vi~~~~ 195 (409)
T 3kki_A 136 LQTICQP--------------NTNVYIDFFAHMSLWEGARYA----NAQAHPFMHNNCDHLRMLIQRH--GPGIIVVDSI 195 (409)
T ss_dssp HHHHCCT--------------TCEEEEETTSCHHHHHHHHHT----TCEEEEECTTCHHHHHHHHHHH--CSCEEEEESB
T ss_pred HHHhcCC--------------CCEEEECCCcCHHHHHHHHHc----CCeEEEecCCCHHHHHHHHHhc--CCeEEEECCC
Confidence 9988764 899999999999999998887 8999999999999999999862 4689999999
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
+|++|.+.|+++|+++|++||++||+||+|+.|++|++|.++...+++.+++||+++||||+||+.||+++++
T Consensus 196 ~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~gg~v~~~ 268 (409)
T 3kki_A 196 YSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRAGAIWCN 268 (409)
T ss_dssp CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEES
T ss_pred CCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCceEEEEC
Confidence 9999999999999999999999999999999999998888877777776678999999999999889998874
No 4
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.9e-32 Score=263.00 Aligned_cols=212 Identities=36% Similarity=0.621 Sum_probs=181.4
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHH----hcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAAR----HGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~----~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
+|+++++|++|+|+|++.+|++++++.+ ++.+.++++..++..+.+.+++++|++++|.+..+++++|+++|..++
T Consensus 44 ~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~ 123 (401)
T 2bwn_A 44 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATL 123 (401)
T ss_dssp CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHH
T ss_pred CCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHH
Confidence 3589999999999999889999986643 455555667777788889999999999999988999999999999988
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCC-CCcEEEEEcCC
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCT-MRKKVVVTDSL 261 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~-~~~~lVv~e~v 261 (334)
.++... .+||.|+++.++|.++..+++.. +++++.++++|+++||+++++.. +++++|+++++
T Consensus 124 ~~l~~~------------~~gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~ 187 (401)
T 2bwn_A 124 STLRVL------------FPGLIIYSDSLNHASMIEGIKRN----AGPKRIFRHNDVAHLRELIAADDPAAPKLIAFESV 187 (401)
T ss_dssp HHHHHH------------STTCEEEEETTCCHHHHHHHHHS----CCCEEEECTTCHHHHHHHHHHSCTTSCEEEEEESB
T ss_pred HHHhcC------------CCCCEEEECchhhHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHhhccCCceEEEEecC
Confidence 876531 13788999999999999888776 88999999999999999998543 36899999999
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
+||+|.+.|+++|.++|++||+++|+||+|+.|.+|++|.++...+++.++.|++++||||+||+.|||++++
T Consensus 188 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~GG~~~~~ 260 (401)
T 2bwn_A 188 YSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAAS 260 (401)
T ss_dssp CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCCEEEEEC
T ss_pred cCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCCCEEecC
Confidence 9999999999999999999999999999999998888888776555654456899999999999999998864
No 5
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.98 E-value=1.2e-30 Score=250.02 Aligned_cols=207 Identities=37% Similarity=0.555 Sum_probs=176.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHH----hcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAAR----HGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~----~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
|++|+||++++++|+..+|.+++++.+ ++.+.+.+++..|..+...+|+++|++++|.++.+++++|++|+..++.
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~ 117 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIA 117 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHH
Confidence 489999999998998889999996643 4555555666667788899999999999999889999999999999998
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
++.++ +|.|+++..+|.++...++.. |.+++.+++.|+++|++++++.++++++|++++++|
T Consensus 118 ~~~~~--------------gd~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 118 AMMAK--------------EDRIAADRLSHASLLEAASLS----PSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp HHCCT--------------TCEEEEETTCCHHHHHHHHTS----SSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred HhCCC--------------CcEEEEcccccHHHHHHHHHc----CCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 87654 788999999999988888776 899999999999999999986433478999999999
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
|+|.+.|+++|.++|++||++||+||+|+.|+++++|.++...++. +.||+++||||++|+.|||++++
T Consensus 180 ptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~~~GG~~~~~ 248 (384)
T 1bs0_A 180 MDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV--KPELLVVTFGKGFGVSGAAVLCS 248 (384)
T ss_dssp TTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC--CCSEEEEESSSTTSSCCEEEEEC
T ss_pred CCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC--CCcEEEeeccchhhccCcEEEeC
Confidence 9999999999999999999999999999988777666655444443 45799999999999999998864
No 6
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.97 E-value=2.6e-30 Score=249.05 Aligned_cols=210 Identities=39% Similarity=0.599 Sum_probs=178.0
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai 182 (334)
+|++||||++++++|+..+|.+++++. +|+.+.+++++..|..+...+|+++|++++|.++.+++++|++|+..++
T Consensus 43 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 122 (401)
T 1fc4_A 43 DGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLF 122 (401)
T ss_dssp TSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTH
T ss_pred CCccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHH
Confidence 458999999999999877999998664 4566555556666667888999999999999988899999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCC---CcEEEEEc
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTM---RKKVVVTD 259 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~---~~~lVv~e 259 (334)
.++..+ +|.|+++.+.|.++..+++.. +.+++.+++.|+++|++++++... ++++|+++
T Consensus 123 ~~~~~~--------------gd~v~~~~~~~~~~~~~~~~~----g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 123 ETLLGA--------------EDAIISDALNHASIIDGVRLC----KAKRYRYANNDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp HHHCCT--------------TCEEEEETTCCHHHHHHHHTS----CSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred HHHcCC--------------CCEEEEcchhHHHHHHHHHHc----CCceEEECCCCHHHHHHHHHHhhccCCCceEEEEe
Confidence 887654 788999999999888877665 899999999999999999975321 57899999
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
+++||+|.+.|+++|.++|++||++||+||+|+.|+.+++|.++...+++.+++||++.||||+| |+.|||++++
T Consensus 185 ~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~ 260 (401)
T 1fc4_A 185 GVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAAR 260 (401)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEEC
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcC
Confidence 99999999999999999999999999999999877766667665555666667899999999999 7789998864
No 7
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.97 E-value=1.9e-29 Score=243.07 Aligned_cols=209 Identities=36% Similarity=0.578 Sum_probs=179.4
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHH----HhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAA----RHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~----~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
|++++||++++++|+..+|.+++++. ++..+..+++...|..+..+++++.+++++|.++++++++|++|+..++.
T Consensus 42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~ 121 (398)
T 3a2b_A 42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLS 121 (398)
T ss_dssp TEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHH
T ss_pred CceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH
Confidence 38999999999889888999998654 34445555667778889999999999999999999999999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCC-CcEEEEEcCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTM-RKKVVVTDSLF 262 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~-~~~lVv~e~v~ 262 (334)
++..+ +|.|+++.+.|.++...++.. |.+++.+++.|+++|++++++... ++++|++++++
T Consensus 122 ~~~~~--------------gd~V~~~~p~~~~~~~~~~~~----g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~ 183 (398)
T 3a2b_A 122 CLMGR--------------NDYILLDERDHASIIDGSRLS----FSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIF 183 (398)
T ss_dssp HSSCT--------------TCEEEEETTCCHHHHHHHHHS----SSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBC
T ss_pred HHhCC--------------CCEEEECCccCHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCC
Confidence 87654 889999999999998888776 899999999999999999986432 68899999999
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCccEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG~i~~~ 334 (334)
||+|.+.|+++|.++|++||++||+||+|+.+++++++..+.+.+++.+++||+++||||+||+.|||++++
T Consensus 184 nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~ 255 (398)
T 3a2b_A 184 SMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLGGFVAGD 255 (398)
T ss_dssp TTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEEC
T ss_pred CCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCCcEEEeC
Confidence 999999999999999999999999999999887776565555555554456899999999999888998864
No 8
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=4.1e-26 Score=219.61 Aligned_cols=204 Identities=13% Similarity=0.066 Sum_probs=164.6
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~ai 182 (334)
++|||++++|.++..+|.|++++.+.-. +..++....|..++++++++.+++++|. +.++++++|++|+..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 5999999999999999999997765321 1122334557788999999999999986 67899999999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----------CHHHHHHHHhcCCC
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----------DMSHLKTLLSCCTM 251 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----------D~~~Le~~l~~~~~ 251 (334)
.+++.+ +|.|+++.+.|.++...++.. +++++.++++ |+++|++++++
T Consensus 120 ~~l~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 178 (407)
T 3nra_A 120 AATVAR--------------GDKVAIVQPDYFANRKLVEFF----EGEMVPVQLDYVSADETRAGLDLTGLEEAFKA--- 178 (407)
T ss_dssp HTTCCT--------------TCEEEEEESCCTHHHHHHHHT----TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT---
T ss_pred HHhCCC--------------CCEEEEcCCcccchHHHHHHc----CCEEEEeecccccccCcCCCcCHHHHHHHHhh---
Confidence 887654 788999999999988888877 8888888872 89999999975
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC-CCCCccEEEecCcccccCC
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN-CERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~-~~~~~Div~~SlsKa~G~~ 327 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.++++..+......++ ...+.+++++||||+||+.
T Consensus 179 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 258 (407)
T 3nra_A 179 GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLS 258 (407)
T ss_dssp TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCG
T ss_pred CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCC
Confidence 6788888899999999999 99999999999999999999998766533333222232 2345679999999999976
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 259 G~r~G~~~~~ 268 (407)
T 3nra_A 259 GYRLGVAFGS 268 (407)
T ss_dssp GGCCEEEEEC
T ss_pred eeeEEEEEcC
Confidence 6 888764
No 9
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.93 E-value=8.9e-25 Score=214.99 Aligned_cols=219 Identities=16% Similarity=0.122 Sum_probs=162.3
Q ss_pred hhcccceeEEEeec-CccCCCC-CCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 103 TFARQFKRLLLFSG-NDYLGLS-SHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 103 ~~~~~g~~~l~f~s-n~yLgl~-~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
.++.+|++||||++ ++++.+. .||+|++++.+.- .+...++.+ ..+.+.+|+++|++++|.+.+++++||++||.
T Consensus 70 ~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~ 147 (439)
T 2oat_A 70 LWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF--YNNVLGEYEEYITKLFNYHKVLPMNTGVEAGE 147 (439)
T ss_dssp EEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS--EESSHHHHHHHHHHHHTCSEEEEESSHHHHHH
T ss_pred EEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc--CCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHH
Confidence 34678899999988 5688888 8999999886542 222222322 35677999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh--------cCCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER--------TKMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~--------~~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++..-..- .++. ..+++++|+.+..+|+++...+.++.. .....++.++++|+++||++++. +
T Consensus 148 ~al~~~~~~~~~-~~g~--~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~ 222 (439)
T 2oat_A 148 TACKLARKWGYT-VKGI--QKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--P 222 (439)
T ss_dssp HHHHHHHHHHHH-TTCC--CTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTS--T
T ss_pred HHHHHHHHHhhh-ccCC--CCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCC--C
Confidence 999976520000 0000 002356777888899987766655410 00146778889999999999952 3
Q ss_pred CcEEEEEcCCCCCCCCcc----CHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFA----PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~----pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|+++++++++|.+. ++++|+++|++||++||+||+|. | +|++|.+++ +++++.+ |++ ||||++|+
T Consensus 223 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-~g~~g~~~~~~~~~~~~--Di~--t~sK~l~~ 296 (439)
T 2oat_A 223 NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-G-LARTGRWLAVDYENVRP--DIV--LLGKALSG 296 (439)
T ss_dssp TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGGGTCCC--SEE--EECGGGGT
T ss_pred CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CccCCcchhHHHhCCCC--cEE--EecccccC
Confidence 689999999999999876 69999999999999999999995 6 788887664 6677655 555 99999975
Q ss_pred C---ccEEeeC
Q 019931 327 Q---GGFIACR 334 (334)
Q Consensus 327 ~---GG~i~~~ 334 (334)
- +|+++++
T Consensus 297 G~~~~G~v~~~ 307 (439)
T 2oat_A 297 GLYPVSAVLCD 307 (439)
T ss_dssp TSSCCEEEEEC
T ss_pred CCCCeEEEEEC
Confidence 2 6787764
No 10
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.93 E-value=7.7e-25 Score=214.12 Aligned_cols=212 Identities=17% Similarity=0.162 Sum_probs=157.0
Q ss_pred hcccceeEEEeecCcc---CCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh--CC-CcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGNDY---LGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK--KK-EDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~y---Lgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~--g~-e~alv~~sG~~A 177 (334)
++.+|++||||+++.+ ||+ .||+|++++.+.-.....+....|..+.+.+|+++|++++ +. +++++++||++|
T Consensus 38 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea 116 (439)
T 3dxv_A 38 IEENGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDA 116 (439)
T ss_dssp EETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHH
T ss_pred EeCCCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHH
Confidence 3466799999999988 887 7999999776532211223345567889999999999998 45 688999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----------CcEEEEeeCC----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----------MVEVFVYKHC---------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----------g~~v~~~~~~---------- 237 (334)
|..+++++... .+++++|+.+..+|+.+..++.+..... ...+..++++
T Consensus 117 ~~~al~~~~~~-----------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (439)
T 3dxv_A 117 NEAAYRAIVKA-----------TGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDA 185 (439)
T ss_dssp HHHHHHHHHHH-----------HSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHH
T ss_pred HHHHHHHHHHH-----------hCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHH
Confidence 99999975321 0247888899999998877665542100 0012334444
Q ss_pred CHHHHHHHHh-cCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCC
Q 019931 238 DMSHLKTLLS-CCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCER 311 (334)
Q Consensus 238 D~~~Le~~l~-~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~ 311 (334)
|+++||++++ ..++++++|++++++|++|.+.| +++|+++|++||++||+||+|+ | +|++|... .+++++.+
T Consensus 186 d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g-~g~~g~~~~~~~~~~~~ 263 (439)
T 3dxv_A 186 ILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-G-LARSGRLHCFEHEGFVP 263 (439)
T ss_dssp HHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-C-TTTTSSSSGGGGTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhcCCCC
Confidence 6899999994 22346899999999999999998 9999999999999999999998 4 67777643 45666654
Q ss_pred CccEEEecCcccccC--CccEEee
Q 019931 312 DVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 312 ~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
|++ ||||+||+ ..|++++
T Consensus 264 --di~--s~sK~~~~G~riG~~~~ 283 (439)
T 3dxv_A 264 --DIL--VLGKGLGGGLPLSAVIA 283 (439)
T ss_dssp --SEE--EECGGGGTTSCCEEEEE
T ss_pred --CEE--EEcchhcCCcceEEEEE
Confidence 555 99999985 2277765
No 11
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.92 E-value=2.8e-24 Score=210.90 Aligned_cols=218 Identities=15% Similarity=0.126 Sum_probs=150.9
Q ss_pred hcccceeEEEeec-CccCCCC-CCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHH
Q 019931 104 FARQFKRLLLFSG-NDYLGLS-SHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMA 180 (334)
Q Consensus 104 ~~~~g~~~l~f~s-n~yLgl~-~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ 180 (334)
++.+|++||||++ ++++.+. .||+|++|+.+.- .+...++.+ ..+...+|+++|++++|.+++++++||++||..
T Consensus 60 ~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~ 137 (433)
T 1z7d_A 60 YDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAF--FSVPLGICERYLTNLLGYDKVLMMNTGAEANET 137 (433)
T ss_dssp EETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTS--EEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred EECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCc--CCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHH
Confidence 4567899999988 5678888 8999999886542 222222222 467889999999999999999999999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTMR 252 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~~ 252 (334)
+++++..-.. -..+ ...+++.+|+.+..+|+++...+.+.... ....+..++++|+++|+++++. ++
T Consensus 138 al~~a~~~~~-~~~g--~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~~ 212 (433)
T 1z7d_A 138 AYKLCRKWGY-EVKK--IPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--PN 212 (433)
T ss_dssp HHHHHHHHHH-HTSC--CCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTS--TT
T ss_pred HHHHHHHHhh-hccC--CCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCC--CC
Confidence 9987542000 0000 00023566777888898776655544200 0135677888999999999952 36
Q ss_pred cEEEEEcCCCCCCCCcc----CHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccCC
Q 019931 253 KKVVVTDSLFSMDGDFA----PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~----pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
+++|+++++++++|.+. ++++|+++|++||++||+||+|+ | +|++|.+++ +++++.+ |++ ||||++|+-
T Consensus 213 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~g~~g~~~~~~~~~~~~--di~--t~sK~l~~G 286 (433)
T 1z7d_A 213 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-G-LGRTGKLLCVHHYNVKP--DVI--LLGKALSGG 286 (433)
T ss_dssp EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGGGTCCC--SEE--EECGGGGTT
T ss_pred EEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-C-CCcCCcchhhHhcCCCC--CEE--EECccccCC
Confidence 89999999999999876 69999999999999999999997 6 788887654 5667655 555 899999742
Q ss_pred ---ccEEeeC
Q 019931 328 ---GGFIACR 334 (334)
Q Consensus 328 ---GG~i~~~ 334 (334)
+|+++++
T Consensus 287 ~~~~G~v~~~ 296 (433)
T 1z7d_A 287 HYPISAVLAN 296 (433)
T ss_dssp SSCCEEEEEC
T ss_pred CCCeEEEEEC
Confidence 5777764
No 12
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.92 E-value=3.8e-24 Score=205.99 Aligned_cols=213 Identities=19% Similarity=0.165 Sum_probs=158.2
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||++| ++||+ .||+|++++.+.- .+..++. .+..+.+++|++++++++|.+++++++||++||.
T Consensus 31 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~ 107 (395)
T 3nx3_A 31 FDDKAKKYLDFSSGIGVCALGY-NHAKFNAKIKAQVDKLLHTSN--LYYNENIAAAAKNLAKASALERVFFTNSGTESIE 107 (395)
T ss_dssp EETTCCEEEESSHHHHTCTTCB-SCHHHHHHHHHHHTTCSCCCT--TSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHH
T ss_pred EECCCCEEEECCCcHHhccCCC-CCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHH
Confidence 35677999999998 56777 6899999876542 2222222 2346888999999999999899999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh--------hcCCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE--------RTKMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~--------~~~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++...... . ..+++.+|+.+..+|+.......+.. .....++..++++|+++|++++++
T Consensus 108 ~al~~~~~~~~~--~----g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 178 (395)
T 3nx3_A 108 GAMKTARKYAFN--K----GVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNE--- 178 (395)
T ss_dssp HHHHHHHHHHHH--T----TCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCT---
T ss_pred HHHHHHHHHhhc--c----CCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccC---
Confidence 999876542100 0 01236677788889988766554431 011356778889999999998863
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++++++|++|.+.| +++|+++|++||++||+||+|+. +|++|... .+++++.+ |++ ||||++|+
T Consensus 179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~--~g~~g~~~~~~~~~~~~--d~~--t~sK~~~~ 252 (395)
T 3nx3_A 179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCG--MGRSGKFFAYEHAQILP--DIM--TSAKALGC 252 (395)
T ss_dssp TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGGGTCCC--SEE--EECGGGTT
T ss_pred CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccC--CCcCCcchhHHhcCCCC--CEE--EecccccC
Confidence 7899999999999999988 99999999999999999999983 56666543 35566544 444 89999975
Q ss_pred --CccEEeeC
Q 019931 327 --QGGFIACR 334 (334)
Q Consensus 327 --~GG~i~~~ 334 (334)
..|+++++
T Consensus 253 G~~~G~~~~~ 262 (395)
T 3nx3_A 253 GLSVGAFVIN 262 (395)
T ss_dssp TSCCEEEEEC
T ss_pred CCceEEEEEc
Confidence 23777653
No 13
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.91 E-value=5.6e-24 Score=211.52 Aligned_cols=218 Identities=16% Similarity=0.128 Sum_probs=156.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ++||++ ||+|++|+.+. ..+...+....+..+...+|+++|+++++ .+++++++||++|
T Consensus 50 ~d~~G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA 128 (472)
T 3hmu_A 50 NDSEGEEILDAMAGLWCVNIGYG-RDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEA 128 (472)
T ss_dssp EETTCCEEECTTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred EECCCCEEEECCCchhhccCCCC-CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHH
Confidence 46778999999986 568885 99999977543 22221223334457888999999999985 4678999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------CCcEEEEee----CCC------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------KMVEVFVYK----HCD------ 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~g~~v~~~~----~~D------ 238 (334)
|..+++++...... .+ .+++..+|+.+..+|+.......+.... .+...+.++ ++|
T Consensus 129 ~~~aik~a~~~~~~--~g---~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~ 203 (472)
T 3hmu_A 129 NDTNIRMVRTYWQN--KG---QPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEE 203 (472)
T ss_dssp HHHHHHHHHHHHHH--TT---CTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHH
T ss_pred HHHHHHHHHHHHHh--cC---CCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHH
Confidence 99999987652100 00 0124677888999999887666554100 012222222 233
Q ss_pred -----HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cccc
Q 019931 239 -----MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQF 307 (334)
Q Consensus 239 -----~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~ 307 (334)
+++||+++++.. .++++|++|++++++|.+.| |++|+++|++||++||+||+|+. +|++|..+ .+++
T Consensus 204 ~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--fgr~G~~~a~~~~ 281 (472)
T 3hmu_A 204 FGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICG--FGRTGNWFGTQTM 281 (472)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccC--CcccCccchhHHh
Confidence 788999887432 36789999999999999887 99999999999999999999984 67777543 5677
Q ss_pred CCCCCccEEEecCcccccCCc---cEEee
Q 019931 308 NCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++.| ||+ ||||++|.-| |++++
T Consensus 282 ~v~p--di~--t~sK~l~gg~~plG~v~~ 306 (472)
T 3hmu_A 282 GIRP--HIM--TIAKGLSSGYAPIGGSIV 306 (472)
T ss_dssp TCCC--SEE--EECGGGTTTSSCCEEEEE
T ss_pred CCCC--cee--eechhhhcCCcceEEEEE
Confidence 8766 455 7999997643 66665
No 14
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.91 E-value=9.5e-24 Score=206.09 Aligned_cols=213 Identities=20% Similarity=0.170 Sum_probs=155.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++||||+++ +++|+ .||++++++.+.- .....++. ...+...+|+++|++++|.+++++++||++||.
T Consensus 52 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~ 128 (420)
T 2pb2_A 52 WDQQGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWHTSNV--FTNEPALRLGRKLIDATFAERVLFMNSGTEANE 128 (420)
T ss_dssp EETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCCCCTT--SCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHH
T ss_pred EECCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhcccccCc--cCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHH
Confidence 45678999999987 88999 7999999876542 22222222 246888999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++..... ..+ ..+++.+|+.+..+|+.+...+.+.... ....+..++++|+++|++++++
T Consensus 129 ~al~~~~~~~~--~~~---~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~--- 200 (420)
T 2pb2_A 129 TAFKLARHYAC--VRH---SPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDD--- 200 (420)
T ss_dssp HHHHHHHHHHH--HHT---CTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCT---
T ss_pred HHHHHHHHHhh--hcc---CCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhcc---
Confidence 99998754100 000 0023467778888998877666554100 0113677788899999999864
Q ss_pred CcEEEEEcCCCCCCCC----ccCHHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGD----FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~----~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++++++|++|. ..++++|+++|++||++||+||+|+ | +|++|..+ .+.+++.+ |++ ||||++|+
T Consensus 201 ~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g-~~~~g~~~~~~~~~~~~--dii--t~sK~l~~ 274 (420)
T 2pb2_A 201 HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-G-MGRTGDLFAYMHYGVTP--DIL--TSAKALGG 274 (420)
T ss_dssp TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHHHTCCC--SEE--EECGGGGT
T ss_pred CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-C-cccCCcHHHHHhcCCCC--CeE--EecccccC
Confidence 7899999999998886 2458999999999999999999995 5 67777665 35566554 555 89999984
Q ss_pred --CccEEee
Q 019931 327 --QGGFIAC 333 (334)
Q Consensus 327 --~GG~i~~ 333 (334)
..|++++
T Consensus 275 G~~iG~~~~ 283 (420)
T 2pb2_A 275 GFPVSAMLT 283 (420)
T ss_dssp TSCCEEEEE
T ss_pred CCceEEEEE
Confidence 1256554
No 15
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.91 E-value=1.2e-23 Score=206.89 Aligned_cols=214 Identities=14% Similarity=0.080 Sum_probs=142.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ .+||+. ||+|++|+.+.- .+.. +....+..+...+|+++|+++++ .+++++++||++|
T Consensus 39 ~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 116 (448)
T 3dod_A 39 KDINGKEYYDGFSSVWLNVHGHR-KKELDDAIKKQLGKIAH-STLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEA 116 (448)
T ss_dssp EETTSCEEEETTHHHHTCSSCBS-CHHHHHHHHHHHTTCSC-CCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred EECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHH
Confidence 45678999999984 678985 999999876542 2221 12234557888999999999984 5678999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCC---CCeEEEEcCCCchhhHHHHHHhhhcC--------CcEEEEeeCC---------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKD---EKIAIFSDALNHASIIDGIRIAERTK--------MVEVFVYKHC--------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~---~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~~v~~~~~~--------- 237 (334)
|..+++++..... .++ ++.+|+.+..+|+.....+.+..... ...+..++.+
T Consensus 117 ~~~al~~~~~~~~--------~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (448)
T 3dod_A 117 MEIALKMAFQYWK--------NIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGD 188 (448)
T ss_dssp HHHHHHHHHHHHH--------HTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCC
T ss_pred HHHHHHHHHHHHH--------hhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccc
Confidence 9999998765200 012 35667778888887765554432100 0112222322
Q ss_pred -------CHHHHHHHHhcCCCCcEEEEEcCCC-CCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c
Q 019931 238 -------DMSHLKTLLSCCTMRKKVVVTDSLF-SMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A 304 (334)
Q Consensus 238 -------D~~~Le~~l~~~~~~~~lVv~e~v~-n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~ 304 (334)
|+++||+++++...++++|++|+++ |++|.+.| +++|+++|++||++||+||+|+. +|++|..+ .
T Consensus 189 ~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g--~g~~g~~~a~ 266 (448)
T 3dod_A 189 PDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATG--FGRTGKMFAC 266 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSSGG
T ss_pred hhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccC--CCcccchhhh
Confidence 4899999997332367899999999 99998877 99999999999999999999983 66777654 4
Q ss_pred cccCCCCCccEEEecCcccccC---CccEEee
Q 019931 305 EQFNCERDVDICVGTLSKAAGC---QGGFIAC 333 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~---~GG~i~~ 333 (334)
+++++.+ |++ ||||++|+ .-|++++
T Consensus 267 ~~~~~~~--di~--t~sK~l~~G~~~ig~v~~ 294 (448)
T 3dod_A 267 EHENVQP--DLM--AAGKGITGGYLPIAVTFA 294 (448)
T ss_dssp GGGTCCC--SEE--EECGGGGTTSSCCEEEEE
T ss_pred hhcCCCC--CEE--EecccccCCcCceEEEEE
Confidence 6777766 444 89999974 2256664
No 16
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.91 E-value=1.4e-23 Score=208.77 Aligned_cols=217 Identities=17% Similarity=0.139 Sum_probs=156.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ++||+ .||+|++|+.+. .....++.. .+.++.+.+|+++|+++++ .+++++++||++|
T Consensus 49 ~d~~G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA 126 (476)
T 3i5t_A 49 HTEDGRRLIDGPAGMWCAQVGY-GRREIVDAMAHQAMVLPYASPW-YMATSPAARLAEKIATLTPGDLNRIFFTTGGSTA 126 (476)
T ss_dssp EETTCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHCCCCCTT-TCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHH
T ss_pred EECCCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhccCcccC-ccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHH
Confidence 45778999999987 45888 499999977543 222222222 4567889999999999984 6789999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEEeeC-----C-C---
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFVYKH-----C-D--- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~~~~-----~-D--- 238 (334)
|..+++++..... .++ .+++..+|+.+..+|+....++.+.... .+...+.+++ + |
T Consensus 127 ~~~Aik~a~~~~~--~~g---~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 201 (476)
T 3i5t_A 127 VDSALRFSEFYNN--VLG---RPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEA 201 (476)
T ss_dssp HHHHHHHHHHHHH--HTT---CTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHH
T ss_pred HHHHHHHHHHHHH--hcC---CCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHH
Confidence 9999998765210 000 0134678888999999887766544210 0222333333 2 1
Q ss_pred -----HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc-c
Q 019931 239 -----MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE-Q 306 (334)
Q Consensus 239 -----~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~-~ 306 (334)
+++||+++++.. .++++|++|++++++|.+.| |++|+++|++||++||+||+|+. +|++|..+ ++ +
T Consensus 202 ~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g--~gr~G~~~~~~~~ 279 (476)
T 3i5t_A 202 FLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTG--FGRCGEWFASEKV 279 (476)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSCHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccC--CccccCceeeecc
Confidence 789999987432 36789999999999998766 99999999999999999999984 67877653 45 7
Q ss_pred cCCCCCccEEEecCcccccCCc----cEEeeC
Q 019931 307 FNCERDVDICVGTLSKAAGCQG----GFIACR 334 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~G----G~i~~~ 334 (334)
+++.| ||+ ||||++|+ | |+++++
T Consensus 280 ~~v~p--di~--t~sK~l~~-G~~plg~v~~~ 306 (476)
T 3i5t_A 280 FGVVP--DII--TFAKGVTS-GYVPLGGLAIS 306 (476)
T ss_dssp TCCCC--SEE--EECGGGGT-TSSCCEEEEEC
T ss_pred cCCCc--chh--hhhhhhcC-CCcCeEEEEEC
Confidence 78776 455 79999985 4 666653
No 17
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.91 E-value=3.5e-24 Score=212.19 Aligned_cols=200 Identities=17% Similarity=0.164 Sum_probs=152.5
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~A 177 (334)
.+|.+|++||||+++ ..||. +||+|++|+.+. ..+.. +.+.+....+|+++|+++++ .+.+++++||++|
T Consensus 81 l~D~dG~~ylD~~~g~~~~~lGH-~hp~v~~Av~~q~~~~~~----~~~~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA 155 (454)
T 4ao9_A 81 LWDADGHRYADFIAEYTAGVYGH-SAPEIRDAVIEAMQGGIN----LTGHNLLEGRLARLICERFPQIEQLRFTNSGTEA 155 (454)
T ss_dssp EEETTCCEEEESSGGGGTTTTCS-CCHHHHHHHHHHHHTCSC----CCSEESSHHHHHHHHHHHSTTCSEEEEESSHHHH
T ss_pred EEECCCCEEEEccccHHhhcccC-CCHHHHHHHHHHHhcCCC----ccCCcHHHHHHHHHHHHhCCCCCEEEEeCchHHH
Confidence 357888999999774 44666 599999987543 23321 23345667889999999885 5778888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh-hhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEE
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA-ERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls-~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lV 256 (334)
|+.+|+..... +++..+|..+..+|+......... .......+..+++||++.+++++++..++..+|
T Consensus 156 ~e~AiklAr~~-----------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAav 224 (454)
T 4ao9_A 156 NLMALTAALHF-----------TGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIERHGPEIAVV 224 (454)
T ss_dssp HHHHHHHHHHH-----------HTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEE
T ss_pred HHHHHHHHHhc-----------ccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHhhcCCceEEE
Confidence 99999975542 345778888888998643221111 111134677889999999999998766678899
Q ss_pred EEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccccC
Q 019931 257 VTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 257 v~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++|+++++.|.+.| |++|+++|++||++||+||+|+ |++|.++ .+++++.|| |+ ||+|++|.
T Consensus 225 IvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t----GR~G~~~a~e~~gv~PD--i~--t~gK~lgg 291 (454)
T 4ao9_A 225 LVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT----SRLAPHGLANKLGIRSD--LT--TLGKYIGG 291 (454)
T ss_dssp EECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG----GGGSTTCHHHHHTCCCS--EE--EEEGGGGT
T ss_pred EeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc----CCCccccchhccCCCCc--EE--EeccccCC
Confidence 99999999999888 9999999999999999999997 4566665 478999884 55 89999964
No 18
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.91 E-value=8.5e-24 Score=208.76 Aligned_cols=218 Identities=15% Similarity=0.106 Sum_probs=154.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ++||+ .||+|++|+.+. ..+...+....+..+.+.+|+++|+++++ .+++++++||++|
T Consensus 46 ~d~~G~~~lD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA 124 (460)
T 3gju_A 46 WDNNGRKSIDAFAGLYCVNVGY-GRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDA 124 (460)
T ss_dssp EETTCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHH
T ss_pred EECCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHH
Confidence 45678999999987 66887 489999976542 22222234455567888999999999984 5678999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----------CCcEEEE----eeCCC-----
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----------KMVEVFV----YKHCD----- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----------~g~~v~~----~~~~D----- 238 (334)
|..+++++...... .+ ..+++.+|+.+..+|+.......+.... .+...+. |+++|
T Consensus 125 ~~~al~~~~~~~~~--~g---~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 199 (460)
T 3gju_A 125 NETNIKLIWYYNNV--LG---RPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSE 199 (460)
T ss_dssp HHHHHHHHHHHHHH--TT---CTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCH
T ss_pred HHHHHHHHHHHHHh--cC---CCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccCh
Confidence 99999987652000 00 0124667778899999887776654210 0122222 22344
Q ss_pred -------HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 239 -------MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 239 -------~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
+++||+++++.. +++++|++|+++|++|.+.| |++|+++|++||++||+||+|+. +|++|..+ .+
T Consensus 200 ~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~gr~g~~~~~~ 277 (460)
T 3gju_A 200 EQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTG--FGRLGTMFGSD 277 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSCHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcccccchHh
Confidence 689999887422 36789999999999998777 99999999999999999999983 56766433 56
Q ss_pred ccCCCCCccEEEecCcccccCC---ccEEee
Q 019931 306 QFNCERDVDICVGTLSKAAGCQ---GGFIAC 333 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~~---GG~i~~ 333 (334)
++++.+ |++ ||||++++- -|++++
T Consensus 278 ~~~~~p--di~--t~sK~l~gG~~~lg~v~~ 304 (460)
T 3gju_A 278 HYGIKP--DLI--TIAKGLTSAYAPLSGVIV 304 (460)
T ss_dssp HHTCCC--SEE--EECGGGTTTSSCCEEEEE
T ss_pred hcCCCC--Cee--eeehhhcCCCCCeEEEEE
Confidence 777766 444 799999752 266665
No 19
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=8.3e-23 Score=195.17 Aligned_cols=209 Identities=12% Similarity=0.071 Sum_probs=157.8
Q ss_pred hhcccceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~A 177 (334)
.++.+|+++|||..++ ..+..+|.|++++.+.- .+..++... ..++.+++++.+++.+| .+.++++++|++|
T Consensus 21 ~~d~~g~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a 97 (391)
T 3dzz_A 21 KWGVLKEKELPMWIAE-MDFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA 97 (391)
T ss_dssp TTTTCCTTCEECCSSC-CSSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred ceeccCCCceeccccC-CCCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence 3567779999999886 67778999999886643 222222111 35666777777777776 3568888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCC 249 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~ 249 (334)
+..++.++.++ +|.|++..+.|.++...++.. +.+++.++. .|+++|++++++
T Consensus 98 ~~~~~~~l~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~d~~~l~~~l~~- 158 (391)
T 3dzz_A 98 ISAMVRQFTSP--------------GDQILVQEPVYNMFYSVIEGN----GRRVISSDLIYENSKYSVNWADLEEKLAT- 158 (391)
T ss_dssp HHHHHHHHSCT--------------TCEEEECSSCCHHHHHHHHHT----TCEEEECCCEEETTEEECCHHHHHHHHTS-
T ss_pred HHHHHHHhCCC--------------CCeEEECCCCcHHHHHHHHHc----CCEEEEeeeeecCCceeecHHHHHHHHhc-
Confidence 99999988754 788999999999988888766 888888876 589999999974
Q ss_pred CCCcEEEEEcCCCCCCCCc---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCccccc
Q 019931 250 TMRKKVVVTDSLFSMDGDF---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAG 325 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G 325 (334)
+++++|++++++|++|.+ .++++|+++|++||++||+||+|+.+.++.........+... ++..|++.||||++|
T Consensus 159 -~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g 237 (391)
T 3dzz_A 159 -PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFN 237 (391)
T ss_dssp -TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHT
T ss_pred -cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhcc
Confidence 378999999999999998 568999999999999999999999765432111111122211 233499999999998
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| |+++++
T Consensus 238 ~~G~r~G~~~~~ 249 (391)
T 3dzz_A 238 LAALHAACAIIP 249 (391)
T ss_dssp CTTTCCEEEECC
T ss_pred ccchhheEEEEC
Confidence 766 888763
No 20
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.91 E-value=1.3e-23 Score=205.22 Aligned_cols=208 Identities=13% Similarity=0.085 Sum_probs=152.2
Q ss_pred hcccceeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGND---YLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++. +||+ .||+|++|+.+.- .+.. .....+...+|+++|++++ +.+++++++||++||
T Consensus 48 ~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~ 122 (429)
T 3k28_A 48 YDIDGNEYIDYVLSWGPLIHGH-ANDRVVEALKAVAERGTS----FGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEAT 122 (429)
T ss_dssp EETTCCEEEESCGGGTTCTTCB-SCHHHHHHHHHHHHHCSC----CSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHH
T ss_pred EECCCCEEEECCCChhhcccCC-CCHHHHHHHHHHHhhCcC----cCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHH
Confidence 456789999999974 5676 6999999876532 2211 1233577899999999998 567889999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------cC------CcEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---------TK------MVEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~~------g~~v~~~~~~D~~~Le 243 (334)
..+++++.... +++.+|+.+..+|+.....+..... .. ...++.++++|+++||
T Consensus 123 ~~ai~~a~~~~-----------~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 191 (429)
T 3k28_A 123 MSALRLARGYT-----------GRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVK 191 (429)
T ss_dssp HHHHHHHHHHH-----------TCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHH
T ss_pred HHHHHHHHHhh-----------CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHH
Confidence 99998765421 2356677788888765332211100 00 1256778889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~ 318 (334)
+++++.+.++++|+++++++++|.+.| +++|+++|++||++||+||+|. |+ ++|... .+++++.+ |+ .
T Consensus 192 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~--~~g~~~~~~~~~~~~--di--~ 264 (429)
T 3k28_A 192 YAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMT-GF--RVAYNCGQGYYGVTP--DL--T 264 (429)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TT--TSSTTHHHHHHTCCC--SE--E
T ss_pred HHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-cc--ccCcchHHHHhCCCC--ce--e
Confidence 999754346789999999999999988 9999999999999999999996 53 556543 45677655 44 4
Q ss_pred cCcccccC--CccEEeeC
Q 019931 319 TLSKAAGC--QGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~~ 334 (334)
||||+||+ ..|+++++
T Consensus 265 t~sK~~~~G~~iG~~~~~ 282 (429)
T 3k28_A 265 CLGKVIGGGLPVGAYGGK 282 (429)
T ss_dssp EECGGGGTTSCCEEEEEC
T ss_pred hhhhhhcCCCCeEEEEEc
Confidence 89999975 34777653
No 21
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.91 E-value=1.8e-23 Score=201.31 Aligned_cols=207 Identities=19% Similarity=0.187 Sum_probs=153.0
Q ss_pred cccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHH
Q 019931 105 ARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMA 180 (334)
Q Consensus 105 ~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ 180 (334)
+.+|++|+||+++ +++|+ .+|++++++.++- .....++.+ ..+...+++++|++++|.+++++++||++|+..
T Consensus 36 d~~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~ 112 (397)
T 2ord_A 36 DEKGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSNLF--WNRPQMELAELLSKNTFGGKVFFANTGTEANEA 112 (397)
T ss_dssp ETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCTTS--EEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHH
T ss_pred ECCCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCcccc--CCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHH
Confidence 4567999999998 89999 7999999775432 111111211 357889999999999999889999999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE------------EEEeeCCCHHHHHHHHhc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE------------VFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~------------v~~~~~~D~~~Le~~l~~ 248 (334)
+++++...... . ..+++++|+.+..+|+++...+.+. +.+ ++.++++|+++|++++++
T Consensus 113 al~~~~~~~~~-~-----~~~~~~vi~~~~~yh~~~~~~~~~~----g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 182 (397)
T 2ord_A 113 AIKIARKYGKK-K-----SEKKYRILSAHNSFHGRTLGSLTAT----GQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSE 182 (397)
T ss_dssp HHHHHHHHHHH-H-----CTTCCEEEEEBTCCCCSSHHHHHHS----BCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCT
T ss_pred HHHHHHHHhhc-C-----CCCCceEEEEcCCcCCCchhhhhcc----CChhhccccCCCCCCeeEecCCCHHHHHHHhhc
Confidence 99887531000 0 0013567778888998877666665 333 777888999999999864
Q ss_pred CCCCcEEEEEcCCCCCCCC-c---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccc
Q 019931 249 CTMRKKVVVTDSLFSMDGD-F---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~-~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa 323 (334)
++++|++++++|++|. + .++++|+++|++||++||+||+|+ | +++.|..+. ..++.. .|++ ||||+
T Consensus 183 ---~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~~--~d~~--s~sK~ 253 (397)
T 2ord_A 183 ---DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-G-MGRTGKLFAYQKYGVV--PDVL--TTAKG 253 (397)
T ss_dssp ---TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSHHHHHTCC--CSEE--EECGG
T ss_pred ---CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCccchhhhhhCCC--CCee--eeccc
Confidence 7899999999999998 3 568999999999999999999997 5 565555432 344543 4655 88999
Q ss_pred ccC--CccEEee
Q 019931 324 AGC--QGGFIAC 333 (334)
Q Consensus 324 ~G~--~GG~i~~ 333 (334)
||+ ..|++++
T Consensus 254 ~~~G~r~G~~~~ 265 (397)
T 2ord_A 254 LGGGVPIGAVIV 265 (397)
T ss_dssp GGTTSCCEEEEE
T ss_pred cCCCcCeEEEEE
Confidence 984 1255554
No 22
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=4.4e-23 Score=198.09 Aligned_cols=214 Identities=19% Similarity=0.152 Sum_probs=150.0
Q ss_pred cccceeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHH
Q 019931 105 ARQFKRLLLFSGND---YLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMA 180 (334)
Q Consensus 105 ~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ 180 (334)
+.+|++|+||++|. .||+ .||+|++++.+.- ....+++. +..+.+.+++++|++++|.+.+++++||++||..
T Consensus 32 d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~ 108 (392)
T 3ruy_A 32 DPEGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSRA--FHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVET 108 (392)
T ss_dssp CTTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTT--SEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred eCCCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHH
Confidence 45679999999871 2455 5899999886542 22222222 3467789999999999999999999999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcC-CCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDA-LNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~-~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
+++++..++.. ..+ ...+++.|++.. .+|........+.... ....+..++++|+++|++++++
T Consensus 109 al~~~~~~~~~-~~~---~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 181 (392)
T 3ruy_A 109 AIKTARRWAYD-VKK---VEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITP--- 181 (392)
T ss_dssp HHHHHHHHHHH-TSC---CCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCT---
T ss_pred HHHHHHHhhhh-ccC---CCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhcc---
Confidence 99976543000 000 001245566544 4555554444432100 0123677888999999999873
Q ss_pred CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccC
Q 019931 252 RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++|++++++|++|.+.| +++|+++|++||++||+||+|+ + +|++|..+. ..+++.+ |++ ||||++++
T Consensus 182 ~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~~~--d~~--~~SK~l~g 255 (392)
T 3ruy_A 182 NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-G-LGRTGKVFACDWDNVTP--DMY--ILGKALGG 255 (392)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-T-TTTTSSSSGGGGGTCCC--SEE--EECGGGGT
T ss_pred CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-C-CCccccchhhhccCCCC--CEE--EEchhhhC
Confidence 7899999999999999998 9999999999999999999996 3 555565543 3445433 555 88999965
Q ss_pred ---CccEEeeC
Q 019931 327 ---QGGFIACR 334 (334)
Q Consensus 327 ---~GG~i~~~ 334 (334)
.+|+++++
T Consensus 256 G~~~~G~~~~~ 266 (392)
T 3ruy_A 256 GVFPISCAAAN 266 (392)
T ss_dssp TTSCCEEEEEC
T ss_pred ChhhhEEEEEC
Confidence 35787764
No 23
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.90 E-value=7.5e-24 Score=209.72 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=154.9
Q ss_pred hcc-cce--eEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccH
Q 019931 104 FAR-QFK--RLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTG 174 (334)
Q Consensus 104 ~~~-~g~--~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG 174 (334)
++. +|+ +||||+|+ ++||+ +||+|++|+.+.- .....+ +..+..+...+|+++|+++++ .+++++++||
T Consensus 67 ~d~~dG~~~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sG 144 (457)
T 3tfu_A 67 TLIRDGQPIEVLDAMSSWWTAIHGH-GHPALDQALTTQLRVMNHVM-FGGLTHEPAARLAKLLVDITPAGLDTVFFSDSG 144 (457)
T ss_dssp EEEETTEEEEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCC-SSSEECHHHHHHHHHHHHHSSTTEEEEEEESSH
T ss_pred EEccCCCeeEEEECCCcHhhhccCC-CCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcH
Confidence 467 899 99999996 67898 7999999775432 211111 122346788999999999995 5678999999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh-----------cCCcEEEEee-----CCC
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER-----------TKMVEVFVYK-----HCD 238 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~-----------~~g~~v~~~~-----~~D 238 (334)
++||..+++++...... .+ ..++..+|..+..+|+.....+.+... ..+...+.++ ++|
T Consensus 145 seA~~~Alk~a~~~~~~--~g---~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d 219 (457)
T 3tfu_A 145 SVSVEVAAKMALQYWRG--RG---LPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAY 219 (457)
T ss_dssp HHHHHHHHHHHHHHHHH--TT---CTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHh--cC---CCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHH
Confidence 99999999987652000 00 012456777899999987766554210 0012222221 158
Q ss_pred HHHHHHHHhcCCCCcEEEEEcC-CCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCC
Q 019931 239 MSHLKTLLSCCTMRKKVVVTDS-LFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERD 312 (334)
Q Consensus 239 ~~~Le~~l~~~~~~~~lVv~e~-v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~ 312 (334)
+++||+++++...++++|++|+ ++|++|.+.| |++|+++|++||++||+||+|+. +|++|.++ .+++++.+
T Consensus 220 ~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g--~gr~G~~~a~~~~~~~p- 296 (457)
T 3tfu_A 220 SAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATG--FGRTGALFAADHAGVSP- 296 (457)
T ss_dssp HHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSTHHHHTCCC-
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccC--CccccchhHhHhcCCCc-
Confidence 8999999975333689999999 9999998876 99999999999999999999984 67777765 36777766
Q ss_pred ccEEEecCcccccC---CccEEee
Q 019931 313 VDICVGTLSKAAGC---QGGFIAC 333 (334)
Q Consensus 313 ~Div~~SlsKa~G~---~GG~i~~ 333 (334)
|++ ||||++++ ..|++++
T Consensus 297 -dii--t~sK~l~gG~~~lG~v~~ 317 (457)
T 3tfu_A 297 -DIM--CVGKALTGGYLSLAATLC 317 (457)
T ss_dssp -SEE--EECGGGGTTSSCCEEEEE
T ss_pred -eEE--EEChhhhCCCcceEEEEE
Confidence 455 99999965 2356654
No 24
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.90 E-value=6.9e-23 Score=201.35 Aligned_cols=214 Identities=14% Similarity=0.077 Sum_probs=152.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCC-cEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKE-DCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e-~alv~~sG~~An 178 (334)
++.+|++||||+++ ++||+ .||+|++|+.+. ..+.. ....+..+...+|+++|+++++.+ .+++++||++||
T Consensus 44 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~ 120 (452)
T 3n5m_A 44 EDIQGKRYLDGMSGLWCVNSGY-GRKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEAN 120 (452)
T ss_dssp EETTCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHH
T ss_pred EECCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHH
Confidence 35677999999998 88998 499999987654 22222 123455788899999999998743 377889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEe--------eCCC----
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVY--------KHCD---- 238 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~--------~~~D---- 238 (334)
..+++++...... + + ..+++.+|+.+..+|+.......+.... ....+... +++|
T Consensus 121 ~~al~~~~~~~~~-~-g---~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (452)
T 3n5m_A 121 ETAFKIARQYYAQ-K-G---EPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENI 195 (452)
T ss_dssp HHHHHHHHHHHHT-T-T---CTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCG
T ss_pred HHHHHHHHHHHHh-c-C---CCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhh
Confidence 9999987632000 0 0 0023567778888998876665543110 00112222 2355
Q ss_pred -----HHHHHHHHh-cCCCCcEEEEEcCC-CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccc
Q 019931 239 -----MSHLKTLLS-CCTMRKKVVVTDSL-FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQ 306 (334)
Q Consensus 239 -----~~~Le~~l~-~~~~~~~lVv~e~v-~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~ 306 (334)
+++||++++ ..+.++++|++|++ +| +|.+.| +++|+++|++||++||+||+|+. +|++|..+ .++
T Consensus 196 ~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~g~~g~~~~~~~ 272 (452)
T 3n5m_A 196 YDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICG--FGRTGKAFGFMN 272 (452)
T ss_dssp GGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhC--CCcccccchhhh
Confidence 899999997 22236789999999 89 998887 99999999999999999999984 56777654 466
Q ss_pred cCCCCCccEEEecCcccccCCc----cEEee
Q 019931 307 FNCERDVDICVGTLSKAAGCQG----GFIAC 333 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~G----G~i~~ 333 (334)
+++.+ |++ ||||++++ | |++++
T Consensus 273 ~~~~~--di~--t~sK~l~~-G~~~ig~~~~ 298 (452)
T 3n5m_A 273 YDVKP--DII--TMAKGITS-AYLPLSATAV 298 (452)
T ss_dssp TTCCC--SEE--EECGGGGT-TSSCCEEEEE
T ss_pred cCCCC--CEE--eecccccC-CCcceEEEEE
Confidence 77665 454 79999986 6 77775
No 25
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.90 E-value=1.3e-22 Score=191.79 Aligned_cols=204 Identities=17% Similarity=0.117 Sum_probs=158.8
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~ 183 (334)
.+|++++||++|+ ..+..+|.+++++.+.-.....+ ..+...+|+++++++++. +.++++++|++|+..++.
T Consensus 13 ~~~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~y-----~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~ 86 (354)
T 3ly1_A 13 PSTDNPIRINFNE-NPLGMSPKAQAAARDAVVKANRY-----AKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIE 86 (354)
T ss_dssp CCSSSCEECSSCC-CSSCCCHHHHHHHHHTGGGTTSC-----CHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHH
T ss_pred CCCCceEEccCCC-CCCCCCHHHHHHHHHHHhhCcCC-----CCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHH
Confidence 4568999999987 56778999999887654322111 135668999999999995 568888999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~ 258 (334)
++.++ ||.|++..+.|.+....++.. |.+++.++.+ |+++|++++++. +++++|++
T Consensus 87 ~l~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~~~v~l 147 (354)
T 3ly1_A 87 AYASL--------------EAQLVIPELTYGDGEHFAKIA----GMKVTKVKMLDNWAFDIEGLKAAVAAY-SGPSIVYL 147 (354)
T ss_dssp HHCCT--------------TCEEEEESSSCTHHHHHHHHT----TCEEEEECCCTTSCCCHHHHHHHHHTC-SSCEEEEE
T ss_pred HHhCC--------------CCeEEECCCCchHHHHHHHHc----CCEEEEecCCCCCCCCHHHHHHHhccC-CCCCEEEE
Confidence 88764 788888889998888887766 8899999877 999999999742 26899998
Q ss_pred cCCCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++++||+|.+.|+++|.++++. +|+++|+||+|+.+.++..........+...+.+++++||||++|..| ||+++
T Consensus 148 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 227 (354)
T 3ly1_A 148 VNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA 227 (354)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec
Confidence 9999999999998888888887 999999999999655433222322222212145699999999998666 88876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 228 ~ 228 (354)
T 3ly1_A 228 H 228 (354)
T ss_dssp C
T ss_pred C
Confidence 3
No 26
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.90 E-value=9.6e-23 Score=201.15 Aligned_cols=219 Identities=17% Similarity=0.142 Sum_probs=155.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ++||++ ||+|++|+.+. ..+...+....+..+...+|+++|+++++ .+++++++||++|
T Consensus 45 ~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA 123 (459)
T 4a6r_A 45 WDSEGNKIIDGMAGLWCVNVGYG-RKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSES 123 (459)
T ss_dssp EETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHH
T ss_pred EECCCCEEEECCCchhcccCCCC-CHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHH
Confidence 45778999999986 568884 89999977543 22221233344567888999999999985 5778999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC----------CcEEEEeeC----C---C--
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK----------MVEVFVYKH----C---D-- 238 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~----------g~~v~~~~~----~---D-- 238 (334)
|..+++++...... .+ ..+++.+|+.+..+|+.......+..... +...+.++. + |
T Consensus 124 ~~~al~~~~~~~~~--~g---~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~ 198 (459)
T 4a6r_A 124 VDTMIRMVRRYWDV--QG---KPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPD 198 (459)
T ss_dssp HHHHHHHHHHHHHH--TT---CTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHH
T ss_pred HHHHHHHHHHHHHh--cC---CCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHH
Confidence 99999987752100 00 00235677788899988766665532110 122222222 3 2
Q ss_pred ------HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccc
Q 019931 239 ------MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQ 306 (334)
Q Consensus 239 ------~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~ 306 (334)
+++||+++++.. .++++|++|++++++|.+.| |++|+++|++||++||+||+|+. +|++|..+ .++
T Consensus 199 ~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~gr~G~~~~~~~ 276 (459)
T 4a6r_A 199 EFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICG--FGRTGEWFGHQH 276 (459)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSSHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcccccchHhh
Confidence 788999887432 36789999999999999887 99999999999999999999984 67777543 467
Q ss_pred cCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 307 FNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+++.+ ||+ ||||++++-| |+++++
T Consensus 277 ~~~~p--di~--t~sK~l~gg~~~lg~v~~~ 303 (459)
T 4a6r_A 277 FGFQP--DLF--TAAKGLSSGYLPIGAVFVG 303 (459)
T ss_dssp HTCCC--SEE--EECGGGGTTSSCCEEEEEC
T ss_pred cCCCC--Cee--ehhhhhcCCCCCccceeeC
Confidence 77766 454 7999997643 777654
No 27
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.90 E-value=2.4e-24 Score=204.13 Aligned_cols=200 Identities=16% Similarity=0.080 Sum_probs=150.7
Q ss_pred eeEEE-eecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH
Q 019931 109 KRLLL-FSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 109 ~~~l~-f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al 185 (334)
|+++| |++|+|||+++||.+.+++++... +...++..+|..+.+.+||++|++++|.+..+++++|++|+..++.++
T Consensus 3 ~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~ 82 (357)
T 3lws_A 3 NRLRTSFQQTTGQISGHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIW 82 (357)
T ss_dssp CHHHHHHHTCSEESSBSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHH
T ss_pred chhhhHHHhhcccccCCCCCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHH
Confidence 56677 899999999999998886654321 123345566767788999999999999998999999999999999988
Q ss_pred hhhhhhccCCCccCCCCCe--EEEEcCCCchhhHHH---HHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCcEEE
Q 019931 186 GNIASLLAGDEKSFKDEKI--AIFSDALNHASIIDG---IRIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd--~Vl~d~~~H~s~~~g---~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~~lV 256 (334)
..+ +| +|+++..+|.+.... ..+. +++++.++. .|+++|+++. ++++|
T Consensus 83 ~~~--------------gd~~~vi~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~~-----~~~~v 139 (357)
T 3lws_A 83 SDE--------------TDNRTVAYHPLCHLEIHEQDGLKELH----PIETILVGAADRLMTLDEIKALP-----DIACL 139 (357)
T ss_dssp HHH--------------HTCCEEEECTTCHHHHSSTTHHHHHS----SCEEEECSCTTSCCCHHHHHTCC-----SCSEE
T ss_pred hhc--------------CCCcEEEecccceeeeeccchhhhcc----CcEEEEecCCCCCcCHHHHhcCc-----CcceE
Confidence 876 34 888888888775442 2233 788887764 2777777651 37899
Q ss_pred EEcCCCCCC-CCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEE
Q 019931 257 VTDSLFSMD-GDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFI 331 (334)
Q Consensus 257 v~e~v~n~~-G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i 331 (334)
++++++|++ |.+.| +++|+++|++||++||+|++|..+..+..|...... . ...|+++.|+||+| |+.||++
T Consensus 140 ~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~--~~~d~~~~s~sK~~~~~~gg~~ 216 (357)
T 3lws_A 140 LLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEI-A--GLFDSIYISFYKGLGGIAGAIL 216 (357)
T ss_dssp EEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHH-H--TTSSEEEEESSSTTCCSSCEEE
T ss_pred EEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHH-H--hcCCEEEEeccccCCCCceEEE
Confidence 999999987 88776 889999999999999999999743322112222111 1 34578899999999 6788888
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 217 ~~~ 219 (357)
T 3lws_A 217 AGP 219 (357)
T ss_dssp EEC
T ss_pred EcC
Confidence 764
No 28
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.90 E-value=3.3e-23 Score=202.18 Aligned_cols=207 Identities=15% Similarity=0.123 Sum_probs=149.9
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++ ++||+ .||+|++|+.+. ..+.. ..+..+...+|+++|++++ +.+++++++||++|+
T Consensus 50 ~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~ 124 (434)
T 3l44_A 50 WDVDGNKYIDYLAAYGPIITGH-AHPHITKAITTAAENGVL----YGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAV 124 (434)
T ss_dssp EETTCCEEEECCGGGTTCSSCB-TCHHHHHHHHHHHHHCSC----CSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHH
T ss_pred EECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHhCcC----CCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHH
Confidence 45678999999987 45777 699999987653 22211 1234677899999999998 467788999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------cC------CcEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---------TK------MVEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~~------g~~v~~~~~~D~~~Le 243 (334)
..+++++... ++++.+|+.+..+|+.....+..... .. ...++.++++|+++|+
T Consensus 125 ~~ai~~a~~~-----------~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 193 (434)
T 3l44_A 125 MTTIRVARAY-----------TGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLK 193 (434)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHH
T ss_pred HHHHHHHHHh-----------hCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHH
Confidence 9999876542 02356677788888764322211100 00 1256778889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~ 318 (334)
+++++.++++++|+++++++++|.+.| +++|+++|++||++||+||+|+ | + ++|... .+++++.+ |+ .
T Consensus 194 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~-g-~-~~g~~~~~~~~~~~~--di--~ 266 (434)
T 3l44_A 194 EALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVIT-A-F-RFMYGGAQDLLGVTP--DL--T 266 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTT-T-T-TSSSSCHHHHHTCCC--SE--E
T ss_pred HHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-c-e-eccccHHHHHcCCCC--Ce--e
Confidence 999754336889999999999999988 9999999999999999999997 4 3 556544 45677765 44 4
Q ss_pred cCcccccC--CccEEee
Q 019931 319 TLSKAAGC--QGGFIAC 333 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~ 333 (334)
||||+||+ .-|++++
T Consensus 267 t~sK~~~~G~~iG~~~~ 283 (434)
T 3l44_A 267 ALGKVIGGGLPIGAYGG 283 (434)
T ss_dssp EEEGGGGTTSSCEEEEE
T ss_pred ehhhhhcCCcCeeeEEE
Confidence 89999974 1256655
No 29
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.90 E-value=2.8e-23 Score=202.91 Aligned_cols=208 Identities=21% Similarity=0.184 Sum_probs=152.3
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++ +++|+ .||+|++++.+. ..+. . ..+..+...+++++|++++ +.+++++++||++||
T Consensus 51 ~d~~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~-~---~~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~ 125 (434)
T 2epj_A 51 YTVDGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGW-L---YGAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEAT 125 (434)
T ss_dssp EETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS-C---CSSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHH
T ss_pred EECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCC-C---CCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 35677999999987 68899 799999987654 2332 1 1234678899999999999 788899999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh---------hcCC------cEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE---------RTKM------VEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~---------~~~g------~~v~~~~~~D~~~Le 243 (334)
..++++...- ++++++|+.+..+|+.....+.+.. ...+ .+++.++++|+++|+
T Consensus 126 ~~al~~ar~~-----------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le 194 (434)
T 2epj_A 126 MTAIRLARGY-----------TGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALE 194 (434)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHH
T ss_pred HHHHHHHHHh-----------hCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHH
Confidence 9999863110 1246788888888874321110000 0012 246778889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~ 318 (334)
+++++...++++|+++++++++|.+.| +++|+++|++||++||+||+|+ |+ +.|.. ..+++++.+ |+ .
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~--~~g~~~~~~~~~~~~--di--~ 267 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF--RLGLEGAQGYFNIEG--DI--I 267 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT--TSSTTHHHHHHTCCC--SE--E
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce--eCCcchhhHHhCCCC--Ce--e
Confidence 999753236789999999999999888 9999999999999999999999 53 33433 345666655 55 4
Q ss_pred cCcccccC--CccEEeeC
Q 019931 319 TLSKAAGC--QGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~~ 334 (334)
||||++|+ .+|+++++
T Consensus 268 s~sK~l~~G~~~G~v~~~ 285 (434)
T 2epj_A 268 VLGKIIGGGFPVGAVAGS 285 (434)
T ss_dssp EEEGGGGTTSSCEEEEEC
T ss_pred eecchhcCCcceeeeeec
Confidence 99999986 55888764
No 30
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.90 E-value=1.1e-22 Score=195.88 Aligned_cols=213 Identities=18% Similarity=0.172 Sum_probs=153.6
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANM 179 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~ 179 (334)
++.+|++|+||+++ +++|+ .||++++++.+.- .....+... ..+.+.+++++|+++++.+++++++||++|+.
T Consensus 34 ~~~~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~ 110 (406)
T 4adb_A 34 WDQQGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGY--TNEPVLRLAKKLIDATFADRVFFCNSGAEANE 110 (406)
T ss_dssp EETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTS--CCHHHHHHHHHHHHHSSCSEEEEESSHHHHHH
T ss_pred EeCCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCc--CCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHH
Confidence 35677999999998 89999 7999999886643 222111111 35778999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh--------cCCcEEEEeeCCCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER--------TKMVEVFVYKHCDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~--------~~g~~v~~~~~~D~~~Le~~l~~~~~ 251 (334)
.+++++....... + ..+++.+|+.+..+|........+... .....+..++++|+++|++++++
T Consensus 111 ~al~~~~~~~~~~--~---~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 182 (406)
T 4adb_A 111 AALKLARKFAHDR--Y---GSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDD--- 182 (406)
T ss_dssp HHHHHHHHHHHHH--T---CTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCST---
T ss_pred HHHHHHHHHHHhc--C---CCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcC---
Confidence 9999875410000 0 002356777888888887666655421 01246778888999999998863
Q ss_pred CcEEEEEcCCCCCCCCc-----cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCccccc
Q 019931 252 RKKVVVTDSLFSMDGDF-----APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~-----~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G 325 (334)
++++|+++ +.|++|.+ .++++|.++|++||++||+||+|+ + ++++|..+. ..+++.+ |++ ||||+||
T Consensus 183 ~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~~~--d~~--t~sK~~~ 255 (406)
T 4adb_A 183 STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-G-VGRTGELYAYMHYGVTP--DLL--TTAKALG 255 (406)
T ss_dssp TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHHHTCCC--SEE--EECGGGG
T ss_pred CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCccchhHHHHhcCCCC--CEE--Eechhhc
Confidence 78999999 55666643 459999999999999999999998 4 566665542 4455544 555 7899998
Q ss_pred C--CccEEeeC
Q 019931 326 C--QGGFIACR 334 (334)
Q Consensus 326 ~--~GG~i~~~ 334 (334)
+ .+|+++++
T Consensus 256 ~G~r~G~~~~~ 266 (406)
T 4adb_A 256 GGFPVGALLAT 266 (406)
T ss_dssp TTSCCEEEEEC
T ss_pred CCCCeEEEEEc
Confidence 4 24787754
No 31
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.90 E-value=2.3e-22 Score=196.15 Aligned_cols=208 Identities=16% Similarity=0.165 Sum_probs=149.9
Q ss_pred hcccceeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGND---YLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An 178 (334)
++.+|++||||+++. .||+ .||+|++|+.+.- .+.. .....+...+|+++|+++++ .+++++++||++||
T Consensus 48 ~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~ 122 (429)
T 4e77_A 48 FDVDGKAYIDYVGSWGPMILGH-NHPAIRQAVIEAVERGLS----FGAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEAT 122 (429)
T ss_dssp EETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTTCSC----CSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHH
T ss_pred EECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHhCcc----cCCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHH
Confidence 456789999999874 4666 5999999886543 3221 12245788999999999984 67789999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh--------h-------cCCcEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE--------R-------TKMVEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~--------~-------~~g~~v~~~~~~D~~~Le 243 (334)
..+++.+... ++++.+|..+..+|+.....+.... . .....+..++++|+++|+
T Consensus 123 ~~al~~a~~~-----------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 191 (429)
T 4e77_A 123 MSAIRLARGY-----------TGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVR 191 (429)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHH
T ss_pred HHHHHHHHHh-----------hCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHH
Confidence 9999864431 1246778888888887653221110 0 001245677889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~ 318 (334)
+++++.++++++|+++++++++|.+.| +++|+++|++||++||+||+|+ |+ ++|... .+++++.+ |+ .
T Consensus 192 ~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~--r~g~~~~~~~~~~~p--di--~ 264 (429)
T 4e77_A 192 QAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF--RVALAGAQDYYHVIP--DL--T 264 (429)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT--TTBTTCHHHHTTCCC--SE--E
T ss_pred HHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc--ccCcchHHHhcCCCC--Ce--e
Confidence 999865457889999999999999888 9999999999999999999999 43 445433 46677665 44 4
Q ss_pred cCcccccC--CccEEeeC
Q 019931 319 TLSKAAGC--QGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~~ 334 (334)
||||+||+ ..|+++++
T Consensus 265 t~sK~~~~G~~~G~~~~~ 282 (429)
T 4e77_A 265 CLGKIIGGGMPVGAFGGR 282 (429)
T ss_dssp EEEGGGGTTSCCEEEEEC
T ss_pred eecccccCCCCeEEEEEC
Confidence 99999974 34777653
No 32
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.90 E-value=1.3e-22 Score=197.52 Aligned_cols=208 Identities=19% Similarity=0.187 Sum_probs=152.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC-CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK-KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g-~e~alv~~sG~~An 178 (334)
++.+|++||||+++ +.||+ .||+|++|+.+.- .+.. .....+...+|+++|+++++ .+++++++||++|+
T Consensus 47 ~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~----~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~ 121 (427)
T 3fq8_A 47 WDVDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKGTS----FGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEAC 121 (427)
T ss_dssp EETTSCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTTCSC----CSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHH
T ss_pred EECCCCEEEECCCchhhhccCC-CCHHHHHHHHHHHHhCCC----cCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 45678999999987 56777 6999999886543 2221 12256888999999999984 67788899999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh---------hhcC------CcEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA---------ERTK------MVEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls---------~~~~------g~~v~~~~~~D~~~Le 243 (334)
..+++.+... ++++++|+.+..+|+......... .... ...++.++++|+++||
T Consensus 122 ~~al~~a~~~-----------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 190 (427)
T 3fq8_A 122 MAVLRIMRAY-----------TGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVK 190 (427)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHH
T ss_pred HHHHHHHHHh-----------hCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHH
Confidence 9999754321 124677888888887543211110 0000 1236778899999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~ 318 (334)
+++++.+.++++|+++++++++|.+.| +++|+++|++||++||+||+|+ |+ +.|.. ..+++++.+ |+ .
T Consensus 191 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~--~~g~~~~~~~~~~~~--di--~ 263 (427)
T 3fq8_A 191 ALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF--RIAYGGVQEKFGVTP--DL--T 263 (427)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT--TTBTTHHHHHTTCCC--SE--E
T ss_pred HHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc--ccCcchhhHhcCCCC--Ch--h
Confidence 999875557899999999999999999 9999999999999999999998 53 44543 345667655 44 5
Q ss_pred cCcccccC--CccEEeeC
Q 019931 319 TLSKAAGC--QGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~~ 334 (334)
||||+||+ ..|+++++
T Consensus 264 t~sK~~~~G~~~G~~~~~ 281 (427)
T 3fq8_A 264 TLGKIIGGGLPVGAYGGK 281 (427)
T ss_dssp EECGGGGTTSSCEEEEEC
T ss_pred hhhhhhhCCcceEEEEEc
Confidence 89999974 34777653
No 33
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.89 E-value=2.4e-22 Score=198.15 Aligned_cols=212 Identities=13% Similarity=0.093 Sum_probs=150.4
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ..||+ +||+|++|+.+.-.....+....+..+...+|+++|+++++ .+++++++||++|
T Consensus 56 ~d~~g~~ylD~~~~~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA 134 (451)
T 3oks_A 56 EDVDGNRLIDLGSGIAVTTVGN-SAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEA 134 (451)
T ss_dssp EETTSCEEEESSHHHHTCTTCT-TCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHH
T ss_pred EECCCCEEEEcCCCccccccCC-CCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHH
Confidence 56788999999986 45776 49999998765432112222334567888999999999986 3578999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------CCcEEEEeeCC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------KMVEVFVYKHC----------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~g~~v~~~~~~----------- 237 (334)
|..+++++... ++++.+|..+..+|+.......+.... ....+..++.+
T Consensus 135 ~~~Alk~a~~~-----------~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 203 (451)
T 3oks_A 135 VENAVKIARSH-----------THKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKE 203 (451)
T ss_dssp HHHHHHHHHHH-----------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTT
T ss_pred HHHHHHHHHHh-----------cCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccc
Confidence 99999876541 124567778889998877666553210 01134444443
Q ss_pred -------CHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-
Q 019931 238 -------DMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV- 303 (334)
Q Consensus 238 -------D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~- 303 (334)
+++.+++.+++. +.++++|++|+++++.|.+.| +++|+++|++||++||+||+|+ | +|++|..+
T Consensus 204 ~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~ 281 (451)
T 3oks_A 204 LATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-G-FARTGAMFA 281 (451)
T ss_dssp TTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSG
T ss_pred cchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CCccccchh
Confidence 234444555421 236789999999999998877 9999999999999999999998 3 56767654
Q ss_pred ccccCCCCCccEEEecCcccccC--CccEEee
Q 019931 304 AEQFNCERDVDICVGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G~--~GG~i~~ 333 (334)
.+++++.+ |++ ||||++|+ .-|++++
T Consensus 282 ~~~~~~~p--di~--t~sK~l~~G~~iG~v~~ 309 (451)
T 3oks_A 282 CEHEGIDP--DLI--VTAKGIAGGLPLSAVTG 309 (451)
T ss_dssp GGGGTCCC--SEE--EECGGGGTTSSCEEEEE
T ss_pred hhhcCCCC--Cee--eehhhhhCCcceEEEEE
Confidence 46677765 455 89999976 2266654
No 34
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.89 E-value=1.1e-22 Score=198.30 Aligned_cols=217 Identities=13% Similarity=0.101 Sum_probs=143.8
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAA 177 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~A 177 (334)
++.+|++||||+++ ++||+. ||+|++++.+.- .... +....+..+.+.+|+++|+++++ .+++++++||++|
T Consensus 24 ~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 24 YDDAGRRYLDGSSGALVANIGHG-RAEVGERMAAQAARLPF-VHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEA 101 (430)
T ss_dssp EETTSCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCCC-CCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHH
T ss_pred EECCCCEEEECCCchhccccCCC-CHHHHHHHHHHHHhccc-ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHH
Confidence 35677999999985 789985 999999775432 1111 11124557888999999999996 4678899999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC--------Cc--EEEEeeCC--------CH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK--------MV--EVFVYKHC--------DM 239 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~--------g~--~v~~~~~~--------D~ 239 (334)
|..+++++...... .+ ..+++.+|+.+..+|+.......+..... .. .+..++++ |+
T Consensus 102 ~~~al~~~~~~~~~--~g---~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
T 3i4j_A 102 TESAVKLARQYHVE--RG---EPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDA 176 (430)
T ss_dssp HHHHHHHHHHHHHH--TT---CTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHh--cC---CCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHH
Confidence 99999987642100 00 01235667778888876654443331000 00 22334443 45
Q ss_pred HHHHHHHhcCC-CCcEEEEEcCCCC-CCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cccc-CCCC
Q 019931 240 SHLKTLLSCCT-MRKKVVVTDSLFS-MDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQF-NCER 311 (334)
Q Consensus 240 ~~Le~~l~~~~-~~~~lVv~e~v~n-~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~-~~~~ 311 (334)
++||+++++.. .++++|+++++++ ++|.+.+ +++|+++|++||++||+||+|+. +|++|... .+++ ++.+
T Consensus 177 ~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~--~~~~g~~~~~~~~~~~~~ 254 (430)
T 3i4j_A 177 EGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSG--MGRCGSPLALSRWSGVTP 254 (430)
T ss_dssp THHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGGTTTCCC
T ss_pred HHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCcccchhhhhhhcCCCC
Confidence 89999997432 3678999999999 9998887 99999999999999999999983 55666543 4556 6655
Q ss_pred CccEEEecCcccccCCc----cEEeeC
Q 019931 312 DVDICVGTLSKAAGCQG----GFIACR 334 (334)
Q Consensus 312 ~~Div~~SlsKa~G~~G----G~i~~~ 334 (334)
|++ ||||++++ | |+++++
T Consensus 255 --di~--t~sK~l~~-G~~r~G~~~~~ 276 (430)
T 3i4j_A 255 --DIA--VLGKGLAA-GYAPLAGLLAA 276 (430)
T ss_dssp --SEE--EECGGGTT-TSSCCEEEEEC
T ss_pred --cEE--EEcccccC-CccccEEEEEC
Confidence 444 79999985 6 787764
No 35
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=3e-22 Score=194.16 Aligned_cols=208 Identities=17% Similarity=0.156 Sum_probs=149.0
Q ss_pred cccceeEEEeecCc---cCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh-C-C-CcEEEeccHHHHH
Q 019931 105 ARQFKRLLLFSGND---YLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK-K-K-EDCLLCPTGFAAN 178 (334)
Q Consensus 105 ~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~-g-~-e~alv~~sG~~An 178 (334)
+.+|++|+||+++. ++|+ .+|.+++++.+.-.........++..+...+|+++|++++ + . +.++++++|++|+
T Consensus 37 d~~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~ 115 (426)
T 1sff_A 37 DVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAV 115 (426)
T ss_dssp ETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred eCCCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHH
Confidence 45669999999876 7888 7999999887653221111112344677899999999999 5 4 5678889999999
Q ss_pred HHHHH---HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc------CC-----cEEEEeeC---C----
Q 019931 179 MAVIV---AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT------KM-----VEVFVYKH---C---- 237 (334)
Q Consensus 179 ~~ai~---al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~------~g-----~~v~~~~~---~---- 237 (334)
..+++ ++.. ++++|+.+..+|......+.+.... .+ ...+.+++ +
T Consensus 116 ~~~~~~a~~~~~--------------~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 181 (426)
T 1sff_A 116 ENAVKIARAATK--------------RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISED 181 (426)
T ss_dssp HHHHHHHHHHHT--------------CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHH
T ss_pred HHHHHHHHHhhC--------------CCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchH
Confidence 99988 4433 3677778888998877676665210 00 22233333 3
Q ss_pred -CHHHHHHHHhcC--CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCC
Q 019931 238 -DMSHLKTLLSCC--TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNC 309 (334)
Q Consensus 238 -D~~~Le~~l~~~--~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~ 309 (334)
|+++|++++++. .+++++|+++++++++|.+.| +++|.++|++||++||+||+|+ + ++++|... .+.++.
T Consensus 182 ~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~~~ 259 (426)
T 1sff_A 182 DAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-G-AGRTGTLFAMEQMGV 259 (426)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSGGGGTTS
T ss_pred HHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCcccchhhhhhcCC
Confidence 788999988741 126789999887767997877 9999999999999999999999 5 56666543 234444
Q ss_pred CCCccEEEecCcccccCCc---cEEeeC
Q 019931 310 ERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
. +|++ ||||+||+ | ||++++
T Consensus 260 ~--~di~--s~sK~~~~-GlriG~~~~~ 282 (426)
T 1sff_A 260 A--PDLT--TFAKSIAG-GFPLAGVTGR 282 (426)
T ss_dssp C--CSEE--EECGGGGT-SSCCEEEEEE
T ss_pred C--CCEE--EEcccccC-CCceEEEEEc
Confidence 3 4554 99999997 7 888763
No 36
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.82 E-value=3.5e-25 Score=220.17 Aligned_cols=205 Identities=19% Similarity=0.207 Sum_probs=153.5
Q ss_pred hhcccceeEEEeecCcc---CCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGNDY---LGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~y---Lgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~A 177 (334)
.+|.+|++||||+++.+ ||. +||+|++|+.+. ..+.. ....++...+|+++|++++ +.+.+++++||++|
T Consensus 94 l~D~dG~~yiD~~~~~~~~~lGh-~~p~V~~Av~~q~~~~~~----~~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA 168 (465)
T 2yky_A 94 FQDVDGHAYVNFLGEYTAGLFGH-SHPVIRAAVERALAVGLN----LSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEA 168 (465)
Confidence 35788999999999876 665 689999987653 23211 1234677899999999999 67889999999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh-hcCCc--EEEEeeCCCHHHHHHHHhcCCCCcE
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE-RTKMV--EVFVYKHCDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~-~~~g~--~v~~~~~~D~~~Le~~l~~~~~~~~ 254 (334)
|+++++++.. .++++++|..+..+|+.....+ +. ...+. .++.++++|+++|++++++.+++++
T Consensus 169 ~~~Aik~ar~-----------~tgr~~ii~~~~~yHG~~~~~~--sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~a 235 (465)
T 2yky_A 169 NLMALATATA-----------ITGRKTVLAFDGGYHGGLLNFA--SGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCA 235 (465)
Confidence 9999986432 1234677888999998765443 10 01133 5667888999999999975434788
Q ss_pred EEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEecCcccccC--C
Q 019931 255 VVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVGTLSKAAGC--Q 327 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~SlsKa~G~--~ 327 (334)
+|++|++++++|.+.| +++|+++|++||++||+||+|+ +.. |.+ ..+++++.+ ||+ ||||++|+ .
T Consensus 236 avi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~---g~~~a~~~~gv~p--Di~--t~sK~lg~G~p 307 (465)
T 2yky_A 236 AILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL---SGGGAQEMLGISA--DLT--TLGKYIGGGMS 307 (465)
Confidence 9999999999998777 9999999999999999999999 533 433 345667655 444 89999986 1
Q ss_pred ccEEee
Q 019931 328 GGFIAC 333 (334)
Q Consensus 328 GG~i~~ 333 (334)
.|++++
T Consensus 308 iG~v~~ 313 (465)
T 2yky_A 308 FGAFGG 313 (465)
Confidence 256654
No 37
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.89 E-value=3.8e-22 Score=191.36 Aligned_cols=212 Identities=17% Similarity=0.127 Sum_probs=156.2
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC-----CC-cEEEeccHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK-----KE-DCLLCPTGFAANM 179 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g-----~e-~alv~~sG~~An~ 179 (334)
.+|+++|||++++ ..+..+|.+++++.+.-.+...+....|..++.+++.+.+.+.+| .+ .++++++|++|+.
T Consensus 27 ~~g~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~ 105 (396)
T 3jtx_A 27 PEGMEAVPLHIGE-PKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALF 105 (396)
T ss_dssp CTTCCCEECSCCS-CCSCCCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHH
T ss_pred ccCCCeEEeCCcC-CCCCCCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHH
Confidence 4469999999997 678889999998877543333344455666777777777777666 34 7888899999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCc
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~ 253 (334)
.++.+++.++. .+.+|.|++..+.|..+...++.. |.+++.++.+ |+++|++++++ ++
T Consensus 106 ~~~~~~~~~g~---------~~~~d~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~g~~~d~~~l~~~~~~---~~ 169 (396)
T 3jtx_A 106 SFVQTVLNPVS---------DGIKPAIVSPNPFYQIYEGATLLG----GGEIHFANCPAPSFNPDWRSISEEVWK---RT 169 (396)
T ss_dssp HHHHHHCCC------------CCCCEEEEEESCCHHHHHHHHHT----TCEEEEEECCTTTCCCCGGGSCHHHHH---TE
T ss_pred HHHHHHhCCCC---------ccCCCEEEEcCCCcHhHHHHHHHc----CCEEEEeecCCCCCccCHHHHHHhhcc---Cc
Confidence 99998876410 000168888888888887777766 8888888752 78899998875 68
Q ss_pred EEEEEcCCCCCCCCccCHH---HHHHHHHHcCCEEEEecCcccccccC-CCcccccc---cCCCCCccEEEecCcccccC
Q 019931 254 KVVVTDSLFSMDGDFAPMV---ELVKLRRKYGFLLVLDDAHGTFVCGK-NGGGVAEQ---FNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~---~L~ela~k~ga~LivDeAh~~Gv~G~-~G~g~~~~---~~~~~~~Div~~SlsKa~G~ 326 (334)
++|++++++||+|.+.|.+ +|+++|++||++||+||+|+...++. ...+.... ++...+.++++.||||+||+
T Consensus 170 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (396)
T 3jtx_A 170 KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNV 249 (396)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSC
T ss_pred EEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCC
Confidence 8988889999999998855 59999999999999999999755432 11111110 11124567999999999987
Q ss_pred Cc---cEEeeC
Q 019931 327 QG---GFIACR 334 (334)
Q Consensus 327 ~G---G~i~~~ 334 (334)
.| ||++++
T Consensus 250 ~G~r~G~~~~~ 260 (396)
T 3jtx_A 250 PGLRSGFVAGD 260 (396)
T ss_dssp GGGCCEEEEEC
T ss_pred cccceEEEEeC
Confidence 66 888764
No 38
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.89 E-value=1.7e-22 Score=199.50 Aligned_cols=208 Identities=15% Similarity=0.195 Sum_probs=148.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~ 176 (334)
++.+|++||||++| ++||+. ||+|++|+.+. ..+. .+....+..+...+|+++|+++++ .+++++++||++
T Consensus 59 ~d~~G~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGse 136 (453)
T 4ffc_A 59 VDADGNSFIDLGAGIAVTTVGAS-HPAVAAAIADQATHFT-HTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAE 136 (453)
T ss_dssp EETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHHHCS-CCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHH
T ss_pred EeCCCCEEEEcCCCcccCcCCCC-CHHHHHHHHHHHHhcc-ccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHH
Confidence 56788999999986 568874 99999977543 2221 122234567888999999999986 357889999999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------CCcEEEEeeCC----C-----
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------KMVEVFVYKHC----D----- 238 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~g~~v~~~~~~----D----- 238 (334)
||..+++++... ++++.+|..+..+|+.......+.... ....+..++.+ |
T Consensus 137 A~~~alk~a~~~-----------~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 205 (453)
T 4ffc_A 137 AVENAIKVARLA-----------TGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLT 205 (453)
T ss_dssp HHHHHHHHHHHH-----------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCC
T ss_pred HHHHHHHHHHHh-----------cCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccc
Confidence 999999865531 124677778999999887766654210 00133444433 3
Q ss_pred --------HHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cc
Q 019931 239 --------MSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AE 305 (334)
Q Consensus 239 --------~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~ 305 (334)
.+.|++.+.. .++++|++|+++++.|.+.| +++|+++|++||++||+||+|+. +|++|..+ .+
T Consensus 206 ~~~~~~~~~~~l~~~i~~--~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g--~g~~g~~~a~~ 281 (453)
T 4ffc_A 206 GEEAARRAISRIETQIGA--QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTG--FARTGAWFASE 281 (453)
T ss_dssp HHHHHHHHHHHHHHHTCG--GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSTHH
T ss_pred hHHHHHHHHHHHHHhcCC--CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccC--CCcccccchhh
Confidence 2344444422 35789999999999998877 99999999999999999999973 56666654 46
Q ss_pred ccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 306 QFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++++.+ |++ ||||++|+ | |++++
T Consensus 282 ~~~~~p--di~--t~sK~~~~-G~~~G~~~~ 307 (453)
T 4ffc_A 282 HEGIVP--DIV--TMAKGIAG-GMPLSAVTG 307 (453)
T ss_dssp HHTCCC--SEE--EECGGGGT-TSSCEEEEE
T ss_pred hcCCCc--chH--hhhhhhcC-CcCeEEEEE
Confidence 677765 444 89999976 4 67665
No 39
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.89 E-value=1.1e-22 Score=198.11 Aligned_cols=207 Identities=16% Similarity=0.144 Sum_probs=150.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++ +++|+ .||+|++++.+.- .+.. ..+..+...+|+++|++++ +.+++++++||++|+
T Consensus 47 ~d~~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~ 121 (424)
T 2e7u_A 47 WDADGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLT----FGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEAT 121 (424)
T ss_dssp EETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSC----CSSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHH
T ss_pred EeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 35667999999987 68999 8999999876542 2221 1235678899999999999 678889999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhh---------hcCC------cEEEEeeCCCHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAE---------RTKM------VEVFVYKHCDMSHLK 243 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~---------~~~g------~~v~~~~~~D~~~Le 243 (334)
..++++...- ++++++|+.+..+|+.....+.+.. ...+ .+++.++++|+++||
T Consensus 122 ~~al~~ar~~-----------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le 190 (424)
T 2e7u_A 122 MSALRLARGY-----------TGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLR 190 (424)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHH
T ss_pred HHHHHHHHHh-----------hCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHH
Confidence 9999852110 1247788888888874322111100 0002 246778889999999
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEe
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVG 318 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~ 318 (334)
+++++..+++++|+++++++++|.+.| +++|+++ ++||++||+||+|+ |+ +.|.. ..+++++.+ |++
T Consensus 191 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~--~~g~~~~~~~~~~~~--di~-- 262 (424)
T 2e7u_A 191 EVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF--RLAFGGATELLGLKP--DLV-- 262 (424)
T ss_dssp HHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT--TSSTTHHHHHHTCCC--SEE--
T ss_pred HHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc--ccchhHHHHHhCCCc--chh--
Confidence 999743236789999999998998887 9999999 99999999999999 53 33433 345667655 554
Q ss_pred cCcccccC--CccEEeeC
Q 019931 319 TLSKAAGC--QGGFIACR 334 (334)
Q Consensus 319 SlsKa~G~--~GG~i~~~ 334 (334)
||||+||+ ..|+++++
T Consensus 263 s~sK~l~~G~~~G~~~~~ 280 (424)
T 2e7u_A 263 TLGKILGGGLPAAAYAGR 280 (424)
T ss_dssp EECGGGGTTSSCEEEEEC
T ss_pred hhhhhhhCCcceEEEEEc
Confidence 99999986 45787764
No 40
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.89 E-value=1.6e-21 Score=185.79 Aligned_cols=198 Identities=12% Similarity=0.101 Sum_probs=149.8
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~~An 178 (334)
|++++||.++++ .+..+|.+++++.+.- .+...+....| ..+++++++++++ .+.++++++|++|+
T Consensus 28 g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~~----~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~ 102 (370)
T 2z61_A 28 GKKVIHLEIGEP-DFNTPKPIVDEGIKSLKEGKTHYTDSRG----ILELREKISELYKDKYKADIIPDNIIITGGSSLGL 102 (370)
T ss_dssp TCCCEECCCCSC-SSCCCHHHHHHHHHHHHTTCCSCCCTTC----CHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHH
T ss_pred CCCEEEccCCCC-CCCCCHHHHHHHHHHHHcCccCCCCCCC----CHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHH
Confidence 588999999875 6666899999776542 22222222223 3556667776653 25788999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEE
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
..++.+++++ ||.|++..+.|.++...++.. |.+++.++ .|+++|++++++ ++++|++
T Consensus 103 ~~~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~v~-~d~~~l~~~l~~---~~~~v~~ 160 (370)
T 2z61_A 103 FFALSSIIDD--------------GDEVLIQNPCYPCYKNFIRFL----GAKPVFCD-FTVESLEEALSD---KTKAIII 160 (370)
T ss_dssp HHHHHHHCCT--------------TCEEEEESSCCTHHHHHHHHT----TCEEEEEC-SSHHHHHHHCCS---SEEEEEE
T ss_pred HHHHHHhcCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEeC-CCHHHHHHhccc---CceEEEE
Confidence 9999988654 788888888888888887766 88888888 899999998864 6788888
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++++||+|.+.|++ |.++|++||++||+||+|+.+.++.....+.. +.-..+.|++++||||++|+.| ||++++
T Consensus 161 ~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 237 (370)
T 2z61_A 161 NSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEKTILINGFSKLYAMTGWRIGYVISN 237 (370)
T ss_dssp ESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSSEEEEEESTTTTTCGGGCCEEEECC
T ss_pred cCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCcEEEEecChhccCCccceEEEEEEC
Confidence 99999999999999 99999999999999999997655321111211 1112456899999999998666 888764
No 41
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.89 E-value=7.3e-22 Score=188.54 Aligned_cols=203 Identities=16% Similarity=0.092 Sum_probs=152.1
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh----CC----C-cEEEeccHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK----KK----E-DCLLCPTGFAA 177 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~----g~----e-~alv~~sG~~A 177 (334)
.|++++||+++++ .+..+|.+++++.+.-... ....++......+|++++++++ |. + .++++++|++|
T Consensus 23 ~g~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~--~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a 99 (376)
T 2dou_A 23 RGVGLIDLSIGST-DLPPPEAPLKALAEALNDP--TTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEG 99 (376)
T ss_dssp TTCCCEECSSCCC-CCCCCHHHHHHHHHHTTCG--GGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHH
T ss_pred cCCCEEeccCCCC-CCCCCHHHHHHHHHHHhCC--CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 3588999999875 6667999999887654221 1112233345678888888887 75 3 67888899999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~ 252 (334)
+..++.++.++ ||.|++..+.|......++.. |.+++.++. .|+++|++++++ +
T Consensus 100 ~~~~~~~l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~l~~---~ 158 (376)
T 2dou_A 100 LAHLLLALTEP--------------EDLLLLPEVAYPSYFGAARVA----SLRTFLIPLREDGLADLKAVPEGVWR---E 158 (376)
T ss_dssp HHHHHHHHCCT--------------TCEEEEESSCCHHHHHHHHHT----TCEEEEECBCTTSSBCGGGSCHHHHH---H
T ss_pred HHHHHHHhcCC--------------CCEEEECCCCcHhHHHHHHHc----CCEEEEeeCCCCCCCCHHHHHHhhcc---C
Confidence 99999988654 788888888888887777766 788888875 378899988864 6
Q ss_pred cEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 253 KKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++..........+. .+.+++++||||+||+.|
T Consensus 159 ~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~ 237 (376)
T 2dou_A 159 AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGA-KERVVELFSLSKSYNLAGF 237 (376)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTG-GGTEEEEEEHHHHHTCGGG
T ss_pred ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCC-CCcEEEEecchhhcCChhh
Confidence 788888899999999887 678999999999999999999976553212222222221 235689999999998666
Q ss_pred --cEEeeC
Q 019931 329 --GFIACR 334 (334)
Q Consensus 329 --G~i~~~ 334 (334)
||++++
T Consensus 238 r~G~~~~~ 245 (376)
T 2dou_A 238 RLGFALGS 245 (376)
T ss_dssp CCEEEEEC
T ss_pred eeEEEecC
Confidence 888764
No 42
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.89 E-value=9.4e-22 Score=191.56 Aligned_cols=209 Identities=24% Similarity=0.226 Sum_probs=148.6
Q ss_pred cccceeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHHH
Q 019931 105 ARQFKRLLLFSGND---YLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFAA 177 (334)
Q Consensus 105 ~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~A 177 (334)
+.+|++|+||+++. ++|+..||+|++++.+.- .+.. +....+..+...+++++|++++|. +++++++||++|
T Consensus 38 d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea 116 (419)
T 2eo5_A 38 DVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH-AAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEA 116 (419)
T ss_dssp ETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC-CSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHH
T ss_pred ECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc-ccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHH
Confidence 45669999999875 788877999999886542 2211 111123457789999999999985 467888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh------c---CCcEEEEeeCC-----------
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER------T---KMVEVFVYKHC----------- 237 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~------~---~g~~v~~~~~~----------- 237 (334)
|..+++++... + ++.+|+.+..+|+.....+.+... . ....++.++++
T Consensus 117 ~~~ai~~~~~~-----------~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~ 184 (419)
T 2eo5_A 117 IEASIKVVKNT-----------G-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHING 184 (419)
T ss_dssp HHHHHHHHHTT-----------S-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCT
T ss_pred HHHHHHHHHHh-----------h-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccc
Confidence 99999876431 0 256777888899887766655311 0 01235555543
Q ss_pred ----------CHHHHH-HHHhcCC--CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 238 ----------DMSHLK-TLLSCCT--MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 238 ----------D~~~Le-~~l~~~~--~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
|+++|+ +++++.. +++++|++++++|++|.+.| +++|+++|++||++||+||+|+. +|++|
T Consensus 185 ~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~--~g~~g 262 (419)
T 2eo5_A 185 YENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMG--LGRTG 262 (419)
T ss_dssp TTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTS
T ss_pred cccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CccCc
Confidence 367888 8876421 25789999999889998777 99999999999999999999983 45555
Q ss_pred ccc-ccccCCCCCccEEEecCcccccCCc----cEEee
Q 019931 301 GGV-AEQFNCERDVDICVGTLSKAAGCQG----GFIAC 333 (334)
Q Consensus 301 ~g~-~~~~~~~~~~Div~~SlsKa~G~~G----G~i~~ 333 (334)
... .+++++.+ |++ ||||+||+ | |++++
T Consensus 263 ~~~~~~~~~~~~--d~~--t~sK~~~~-G~~riG~~~~ 295 (419)
T 2eo5_A 263 KLFAIENFNTVP--DVI--TLAKALGG-GIMPIGATIF 295 (419)
T ss_dssp SSSGGGGGTCCC--SEE--EECGGGGT-TTSCCEEEEE
T ss_pred chhhHHhcCCCC--CEE--EecccccC-CccceEEEEE
Confidence 432 34555544 554 89999985 6 77765
No 43
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.89 E-value=2e-22 Score=193.78 Aligned_cols=204 Identities=18% Similarity=0.153 Sum_probs=148.5
Q ss_pred cccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHHH
Q 019931 105 ARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAAN 178 (334)
Q Consensus 105 ~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~An 178 (334)
+.+|+.|+||+++ +++|+ .+|.+++++.++- .....++.+ ..+...+++++++++++ .+.+++++||++|+
T Consensus 41 d~~g~~~ld~~~~~~~~~~g~-~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~ 117 (395)
T 1vef_A 41 DAEGNEYIDCVGGYGVANLGH-GNPEVVEAVKRQAETLMAMPQTL--PTPMRGEFYRTLTAILPPELNRVFPVNSGTEAN 117 (395)
T ss_dssp ETTSCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCTTS--CCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHH
T ss_pred eCCCCEEEEccCccccccCCC-CCHHHHHHHHHHHHhCCCCcccc--CCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHH
Confidence 4556999999887 57887 7899999775432 111112222 35788999999999994 56788889999999
Q ss_pred HHHHHHHh--hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc--------CCcEEEEeeCCCHHHHHHHHhc
Q 019931 179 MAVIVAVG--NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT--------KMVEVFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 179 ~~ai~al~--~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~--------~g~~v~~~~~~D~~~Le~~l~~ 248 (334)
..+++++. .+ ++++|+.+..+|.++...+.+.... ....+..++++|+++|++++++
T Consensus 118 ~~al~~~~~~~~-------------~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~ 184 (395)
T 1vef_A 118 EAALKFARAHTG-------------RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE 184 (395)
T ss_dssp HHHHHHHHHHHS-------------CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT
T ss_pred HHHHHHHHHHhC-------------CCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc
Confidence 99998764 22 3567777777888776666554100 0112566777899999999864
Q ss_pred CCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKA 323 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa 323 (334)
++++|++++++|++|.+.| +++|.++|++||++||+||+|+ | +++.|..+ ....++. .|++ ||||+
T Consensus 185 ---~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~-~~~~g~~~~~~~~~~~--~d~~--s~sK~ 255 (395)
T 1vef_A 185 ---ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-G-MGRTGKRFAFEHFGIV--PDIL--TLAKA 255 (395)
T ss_dssp ---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSTHHHHTCC--CSEE--EECGG
T ss_pred ---CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCCchhHhhhcCCC--CCEE--EEccc
Confidence 6899999999999999888 9999999999999999999999 5 55555543 2334443 4655 89999
Q ss_pred ccC--CccEEee
Q 019931 324 AGC--QGGFIAC 333 (334)
Q Consensus 324 ~G~--~GG~i~~ 333 (334)
|++ ..|++++
T Consensus 256 ~~~g~~~G~~~~ 267 (395)
T 1vef_A 256 LGGGVPLGVAVM 267 (395)
T ss_dssp GGTTSSCEEEEE
T ss_pred ccCCCceEEEEe
Confidence 986 1266554
No 44
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.89 E-value=2e-22 Score=198.05 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=143.7
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh-CCCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK-KKEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~-g~e~alv~~sG~~An 178 (334)
++.+|++||||+++ +++|+ .||+|++++.+.- .+. . ..+..+...++.+.+++++ +.+++++++||++|+
T Consensus 52 ~d~~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~-~---~~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~ 126 (453)
T 2cy8_A 52 TDVDGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV-Q---YAASHPLEVRWAERIVAAFPSIRKLRFTGSGTETT 126 (453)
T ss_dssp EETTCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC-S---SCSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHH
T ss_pred EECCCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC-C---CCCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHH
Confidence 34567999999988 78999 7999999886643 322 1 1234577778888888877 567889999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh------cCC------cEEEEeeCCCHHHHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER------TKM------VEVFVYKHCDMSHLKTLL 246 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~------~~g------~~v~~~~~~D~~~Le~~l 246 (334)
..++++...- ++++++|+.+..+|+.....+..... ..+ ..++.++++|+++||+++
T Consensus 127 ~~al~~ar~~-----------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l 195 (453)
T 2cy8_A 127 LLALRVARAF-----------TGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVF 195 (453)
T ss_dssp HHHHHHHHHH-----------HCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHHh-----------hCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHH
Confidence 9999872110 02367888887788543322111100 002 235677789999999999
Q ss_pred hcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccccCCCCCccEEEecCc
Q 019931 247 SCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 247 ~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~Sls 321 (334)
++..+++++|+++++++++|.+.| +++|+++|++||++||+||+|+ |+ +.|.. ..+++++.+ |++ |||
T Consensus 196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~--~~g~~~~~~~~~~~~--di~--s~s 268 (453)
T 2cy8_A 196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF--RVGNHGMQALLDVQP--DLT--CLA 268 (453)
T ss_dssp HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT--TTCTTHHHHHHTCCC--SEE--EEE
T ss_pred HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc--ccCchhhhHHhCCCC--cEE--EEC
Confidence 753236789999999998998887 9999999999999999999998 54 33433 344566655 554 899
Q ss_pred ccccC--CccEEeeC
Q 019931 322 KAAGC--QGGFIACR 334 (334)
Q Consensus 322 Ka~G~--~GG~i~~~ 334 (334)
|+||+ .+|+++++
T Consensus 269 K~l~~G~~~G~v~~~ 283 (453)
T 2cy8_A 269 KASAGGLPGGILGGR 283 (453)
T ss_dssp GGGGTTSSCEEEEEC
T ss_pred hhhhCCcceEEEech
Confidence 99975 45888764
No 45
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.89 E-value=6.6e-22 Score=192.41 Aligned_cols=205 Identities=17% Similarity=0.152 Sum_probs=152.9
Q ss_pred hccc--ceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHH
Q 019931 104 FARQ--FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFA 176 (334)
Q Consensus 104 ~~~~--g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~ 176 (334)
++.. |++||||..++ ..+..+|.|++++.+.- .+..++.. ...++.+++.+.+++.++ .+.++++++|++
T Consensus 54 ~d~~~~g~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~e 130 (421)
T 3l8a_A 54 WKTSENNPELLQMWVAD-MDFLPVPEIKEAIINYGREHIFGYNY--FNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVP 130 (421)
T ss_dssp TGGGTTCTTCEECCSSC-CCSCCCHHHHHHHHHHHHHCCSSCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred ccccCCCCCeeecccCC-CCCCCCHHHHHHHHHHHhcCCcCCCC--CCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHH
Confidence 4555 79999998876 67778999999886542 22222211 125667778888887777 345788899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhc
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSC 248 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~ 248 (334)
|+..+++++.++ +|.|++..+.|......+... +.+++.++. .|+++|++++++
T Consensus 131 a~~~a~~~~~~~--------------gd~Vi~~~~~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 131 AISIALQAFSEK--------------GDAVLINSPVYYPFARTIRLN----DHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp HHHHHHHHHSCT--------------EEEEEEEESCCHHHHHHHHHT----TEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--------------CCEEEECCCCcHHHHHHHHHC----CCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 999999988654 788888888888877777766 777777764 399999999974
Q ss_pred CCCCcEEEEEcCCCCCCCCc---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---CCccEEEecCcc
Q 019931 249 CTMRKKVVVTDSLFSMDGDF---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---RDVDICVGTLSK 322 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---~~~Div~~SlsK 322 (334)
+++++|++++++|++|.+ .++++|+++|++||++||+||+|+...+ +|........+. .+.++++.|+||
T Consensus 193 --~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~--~g~~~~~~~~~~~~~~~~~i~~~s~sK 268 (421)
T 3l8a_A 193 --NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLAL--FGNTHHSLNTLDASYKDFTIILSSATK 268 (421)
T ss_dssp --TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC--TTCCCCCGGGSCTTGGGTEEEEECSHH
T ss_pred --cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccccc--CCCCCccHHHcCchhcCcEEEEEeChh
Confidence 378999999999999988 4689999999999999999999986443 343322222222 234588999999
Q ss_pred cccCCc---cEEee
Q 019931 323 AAGCQG---GFIAC 333 (334)
Q Consensus 323 a~G~~G---G~i~~ 333 (334)
+||..| |++++
T Consensus 269 ~~g~~G~~~G~~~~ 282 (421)
T 3l8a_A 269 TFNIAGTKNSFAII 282 (421)
T ss_dssp HHTCGGGCCEEEEC
T ss_pred hccCchhheEeEEc
Confidence 998655 78765
No 46
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.88 E-value=1.2e-21 Score=186.57 Aligned_cols=200 Identities=16% Similarity=0.094 Sum_probs=152.6
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai 182 (334)
++++|||++++ .++..+|.|++++.+. ..+..++... ..++.+++++.+++++| .+.++++++|++|+..++
T Consensus 23 ~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~ 99 (383)
T 3kax_A 23 NEELIHAWIAD-MDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSI 99 (383)
T ss_dssp SSCCEECCCSS-CSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCCeeeccccc-CCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHH
Confidence 48999999987 7888899999987654 2222222111 45777888888888877 356888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCCCcE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~ 254 (334)
.+++++ ||.|++..+.|.+....++.. +.+++.++. .|+++|+++++ ++++
T Consensus 100 ~~l~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~ 158 (383)
T 3kax_A 100 QAFTKE--------------NESVLVQPPIYPPFFEMVTTN----NRQLCVSPLQKQNDTYAIDFEHLEKQFQ---QGVK 158 (383)
T ss_dssp HHHCCT--------------TCEEEECSSCCHHHHHHHHHT----TCEEEECCCEEETTEEECCHHHHHHHHT---TTCC
T ss_pred HHhCCC--------------CCEEEEcCCCcHHHHHHHHHc----CCEEEeccceecCCcEEEcHHHHHHHhC---cCCe
Confidence 988764 788999999999888887766 788888775 38999999994 3788
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---CCccEEEecCcccccCCc
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---RDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---~~~Div~~SlsKa~G~~G 328 (334)
+|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++ |........+. .+.++++.||||++|..|
T Consensus 159 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (383)
T 3kax_A 159 LMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYA--DHTHTPFASLSEELAARTITCMAPSKTFNIAG 236 (383)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccC--CCCceeHhhcCccccCcEEEEEEChhhccCcc
Confidence 8888999999999987 556777799999999999999875543 32221112222 144689999999998666
Q ss_pred ---cEEee
Q 019931 329 ---GFIAC 333 (334)
Q Consensus 329 ---G~i~~ 333 (334)
|++++
T Consensus 237 ~r~G~~~~ 244 (383)
T 3kax_A 237 LQASIIII 244 (383)
T ss_dssp GCCEEEEC
T ss_pred hhheEEEe
Confidence 88765
No 47
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.88 E-value=7.3e-23 Score=203.40 Aligned_cols=224 Identities=15% Similarity=0.167 Sum_probs=148.8
Q ss_pred hhcccceeEEEeecCcc---CCCCCCHHHHHHHHHhc----CCCCccccccCchHHHHHHHHHHHhHh--CCCcEEEecc
Q 019931 103 TFARQFKRLLLFSGNDY---LGLSSHPTIAKAAARHG----MGPRGSALICGYTNYHRLLESCLADLK--KKEDCLLCPT 173 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~y---Lgl~~~p~v~~a~~~~g----~g~~~sr~~~G~~~~~~~LE~~La~~~--g~e~alv~~s 173 (334)
.++.+|++||||+++.+ ||+ +||+|++|+.+.- .+.+.........++.++|+++|+++. +.+++++++|
T Consensus 57 l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~s 135 (472)
T 1ohv_A 57 LVDVDGNRMLDLYSQISSIPIGY-SHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMAC 135 (472)
T ss_dssp EEBTTSCEEEESSHHHHTCSSCB-TCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESS
T ss_pred EEeCCCCEEEECCCCHhhcccCC-CCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCC
Confidence 35688999999999755 666 6999999886531 111110000113456666777777776 4678999999
Q ss_pred HHHHHHHHHHHHhhh------hh-hcc--------CCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc----CCc-----
Q 019931 174 GFAANMAVIVAVGNI------AS-LLA--------GDEKSFKDEKIAIFSDALNHASIIDGIRIAERT----KMV----- 229 (334)
Q Consensus 174 G~~An~~ai~al~~~------~~-~~~--------~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~----~g~----- 229 (334)
|++||.++++++... +. -++ ....|.+.++.+|..+..+|+....++.++... .+.
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 999999999976421 00 000 000000013678888999999988777665210 011
Q ss_pred EEEEe-----e------CC------CHHHHHHHHhcCCC---CcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEE
Q 019931 230 EVFVY-----K------HC------DMSHLKTLLSCCTM---RKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLL 285 (334)
Q Consensus 230 ~v~~~-----~------~~------D~~~Le~~l~~~~~---~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~L 285 (334)
..+.+ + ++ |+++|+++|++... ++++|++|+++|++|.+.| |++|+++|++||++|
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 01122 1 22 67889998875211 6899999999999999887 999999999999999
Q ss_pred EEecCcccccccCCCcc-cccccCCCCCccEEEecCcccccCCccEEe
Q 019931 286 VLDDAHGTFVCGKNGGG-VAEQFNCERDVDICVGTLSKAAGCQGGFIA 332 (334)
Q Consensus 286 ivDeAh~~Gv~G~~G~g-~~~~~~~~~~~Div~~SlsKa~G~~GG~i~ 332 (334)
|+||+|+ | +|++|.+ ..+++++...+|++ ||||++ ..|||++
T Consensus 296 i~DEv~~-g-~g~~g~~~~~~~~gv~~~~Di~--t~sK~~-l~GG~~~ 338 (472)
T 1ohv_A 296 LVDEVQT-G-GGSTGKFWAHEHWGLDDPADVM--TFSKKM-MTGGFFH 338 (472)
T ss_dssp EEECTTT-T-TTTTSSSSGGGGGCCSSCCSEE--EECGGG-SSEEEEE
T ss_pred EEeCccc-C-CCCCCCchhccccCCCCCCCEE--EEcccc-ccCCccC
Confidence 9999997 4 6777764 34566764224655 899995 2268765
No 48
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.88 E-value=1.9e-21 Score=187.01 Aligned_cols=201 Identities=17% Similarity=0.167 Sum_probs=148.6
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh----CC----CcEEEeccHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK----KK----EDCLLCPTGFAA 177 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~----g~----e~alv~~sG~~A 177 (334)
.|++++||+++++ .+..+|.+++++.+.- .+...+....| ..+|++++++++ |. +.++++++|++|
T Consensus 39 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~g----~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~a 113 (389)
T 1o4s_A 39 KGEDVINLTAGEP-DFPTPEPVVEEAVRFLQKGEVKYTDPRG----IYELREGIAKRIGERYKKDISPDQVVVTNGAKQA 113 (389)
T ss_dssp TTCCCEECCCSSC-SSCCCHHHHHHHHHHHTTCCCCCCCTTC----CHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHH
T ss_pred cCCCEEEccCCCC-CCCCCHHHHHHHHHHHhcCCCCCCCCCC----CHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHH
Confidence 3588999999875 5566899999876543 22212221223 355666666665 53 468888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~ 250 (334)
+..++.+++.+ ||.|++..+.|.++...++.. |.+++.++.+ |+++|++++++
T Consensus 114 l~~~~~~l~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 173 (389)
T 1o4s_A 114 LFNAFMALLDP--------------GDEVIVFSPVWVSYIPQIILA----GGTVNVVETFMSKNFQPSLEEVEGLLVG-- 173 (389)
T ss_dssp HHHHHHHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECCGGGTTCCCHHHHHHTCCT--
T ss_pred HHHHHHHhCCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEEecCCccCCCCCHHHHHHhccc--
Confidence 99999988654 788888888888888877766 7888888753 77888887754
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++.....+.. +.-..+.|++++||||+||+.
T Consensus 174 -~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~ 251 (389)
T 1o4s_A 174 -KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMT 251 (389)
T ss_dssp -TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCG
T ss_pred -CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCc
Confidence 6888999999999999877 89999999999999999999997655321111221 211245789999999999866
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 252 G~r~G~l~~~ 261 (389)
T 1o4s_A 252 GWRVGYLISS 261 (389)
T ss_dssp GGCCEEEECC
T ss_pred ccceEEEEeC
Confidence 6 888764
No 49
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.88 E-value=1.4e-21 Score=187.06 Aligned_cols=206 Identities=12% Similarity=0.113 Sum_probs=148.1
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAV 181 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~a 181 (334)
+|++++||+++++ .+..+|.+++++.+.- .+...+....|...+.+++.+.+.+.+| .+.++++++|++|+..+
T Consensus 28 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~ 106 (388)
T 1j32_A 28 EGIDVCSFSAGEP-DFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNL 106 (388)
T ss_dssp TTCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHH
T ss_pred cCCCEEECCCCCC-CCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHH
Confidence 4588999999875 5667899999776542 2222232333444444444444444444 25678888999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~ 254 (334)
+.++.++ ||.|++..+.|.++...++.. |.+++.++.+ |+++|++++++ +++
T Consensus 107 ~~~~~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~ 165 (388)
T 1j32_A 107 MLAMIEP--------------GDEVIIPAPFWVSYPEMVKLA----EGTPVILPTTVETQFKVSPEQIRQAITP---KTK 165 (388)
T ss_dssp HHHHCCT--------------TCEEEEESSCCTHHHHHHHHT----TCEEEEECCCGGGTTCCCHHHHHHHCCT---TEE
T ss_pred HHHhcCC--------------CCEEEEcCCCChhHHHHHHHc----CCEEEEecCCcccCCCCCHHHHHHhcCc---Cce
Confidence 9988654 788888888888888777766 7888888753 78888888864 688
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc--
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-- 328 (334)
+|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++.........+.. ..+.|+++.|+||+||+.|
T Consensus 166 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r 245 (388)
T 1j32_A 166 LLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWR 245 (388)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTC
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccc
Confidence 9999999999999865 899999999999999999999976553211111111111 0235899999999998666
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
|+++++
T Consensus 246 ~G~~~~~ 252 (388)
T 1j32_A 246 VGFLAGP 252 (388)
T ss_dssp CEEEECC
T ss_pred eEEEEeC
Confidence 888764
No 50
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.88 E-value=5.1e-22 Score=189.68 Aligned_cols=198 Identities=12% Similarity=0.094 Sum_probs=153.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~ 183 (334)
+.++||++++ .++..+|.|++++.+.- .+..+ +..+..++.+++++.+++++| .+.++++++|++|+..++.
T Consensus 32 ~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~--y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 32 NDLLPMWVAD-MDFKAAPCIIDSLKNRLEQEIYG--YTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLIN 108 (391)
T ss_dssp SCSEECCSSS-CSSCCCHHHHHHHHHHHTTCCCC--CBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCceeccccC-CCCCCCHHHHHHHHHHHhCCCCC--CCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHH
Confidence 5669999987 77888999999886643 22222 223457888899999999887 3578899999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC---------CHHHHHHHHhcCCCCcE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC---------DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~---------D~~~Le~~l~~~~~~~~ 254 (334)
+++++ +|.|++..+.|.+....++.. +.+++.++.+ |+++|++++++ ++
T Consensus 109 ~~~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~ 166 (391)
T 4dq6_A 109 ELTKA--------------NDKIMIQEPVYSPFNSVVKNN----NRELIISPLQKLENGNYIMDYEDIENKIKD----VK 166 (391)
T ss_dssp HHSCT--------------TCEEEECSSCCTHHHHHHHHT----TCEEEECCCEECTTSCEECCHHHHHHHCTT----EE
T ss_pred HhCCC--------------CCEEEEcCCCCHHHHHHHHHc----CCeEEeeeeeecCCCceEeeHHHHHHHhhc----CC
Confidence 88754 788999999998888887766 8888887765 88999988863 78
Q ss_pred EEEEcCCCCCCCCc---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCC---CccEEEecCcccccCCc
Q 019931 255 VVVTDSLFSMDGDF---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCER---DVDICVGTLSKAAGCQG 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~---~~Div~~SlsKa~G~~G 328 (334)
+|++++++||+|.+ .++++|+++|++||++||+||+|+.+.++ |........+.+ +..+++.||||++|..|
T Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 244 (391)
T 4dq6_A 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK--KHKHIPMASISKEFEKNTITCMAPTKTFNIAG 244 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHHTEEEEECSHHHHTCGG
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccC--CCCccCHHHcCccccCcEEEEEechhhccCcc
Confidence 89999999999998 45888999999999999999999875543 322211112211 23488999999998655
Q ss_pred ---cEEee
Q 019931 329 ---GFIAC 333 (334)
Q Consensus 329 ---G~i~~ 333 (334)
|++++
T Consensus 245 ~r~G~~~~ 252 (391)
T 4dq6_A 245 LQSSYVVL 252 (391)
T ss_dssp GCCEEEEC
T ss_pred cceEEEEe
Confidence 88765
No 51
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.88 E-value=7.5e-22 Score=192.29 Aligned_cols=216 Identities=15% Similarity=0.066 Sum_probs=146.6
Q ss_pred cccceeEEEeecC---ccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHHH
Q 019931 105 ARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAAN 178 (334)
Q Consensus 105 ~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~An 178 (334)
+.+|++|+||+++ +++|+ .||+|++++.++- .+...+ ......+...+++++|+++++ .+++++++||++||
T Consensus 39 d~~g~~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~ 116 (429)
T 1s0a_A 39 LSDGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVM-FGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAV 116 (429)
T ss_dssp ETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCC-CSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHH
T ss_pred eCCCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhccccc-ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHH
Confidence 4567999999887 47887 5999999776532 111111 111124667899999999995 56788899999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh-----------cCCcEEEEee---------CCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER-----------TKMVEVFVYK---------HCD 238 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~-----------~~g~~v~~~~---------~~D 238 (334)
..+++++..... ..+ ..++.+|+.+..+|.+....+.+... ..+...+.++ +.|
T Consensus 117 ~~ai~~~~~~~~--~~g----~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 190 (429)
T 1s0a_A 117 EVAMKMALQYWQ--AKG----EARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERD 190 (429)
T ss_dssp HHHHHHHHHHHH--HHT----CCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGG
T ss_pred HHHHHHHHHHhc--ccC----CCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHH
Confidence 999986542100 000 00245666777889876655543210 0023444443 358
Q ss_pred HHHHHHHHhcCCCCcEEEEEcCC-CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCC
Q 019931 239 MSHLKTLLSCCTMRKKVVVTDSL-FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERD 312 (334)
Q Consensus 239 ~~~Le~~l~~~~~~~~lVv~e~v-~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~ 312 (334)
+++|++++++..+++++|+++++ +|++|.+.| +++|+++|++||++||+||+|+. +|+.|... .+++++.+
T Consensus 191 ~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~--~g~~g~~~~~~~~~~~~- 267 (429)
T 1s0a_A 191 MVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATG--FGRTGKLFACEHAEIAP- 267 (429)
T ss_dssp GHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGGGTCCC-
T ss_pred HHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhC--CcccchHHHhhhcCCCC-
Confidence 89999998753336789999999 899998887 99999999999999999999973 45555432 34455544
Q ss_pred ccEEEecCcccccC---CccEEeeC
Q 019931 313 VDICVGTLSKAAGC---QGGFIACR 334 (334)
Q Consensus 313 ~Div~~SlsKa~G~---~GG~i~~~ 334 (334)
|++ ||||+|++ ..|+++++
T Consensus 268 -d~~--t~sK~l~~G~~~iG~~~~~ 289 (429)
T 1s0a_A 268 -DIL--CLGKALTGGTMTLSATLTT 289 (429)
T ss_dssp -SEE--EECGGGGTSSSCCEEEEEC
T ss_pred -CEE--EecccccCCCccceEEEeC
Confidence 555 89999975 12777653
No 52
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.88 E-value=6.8e-22 Score=188.16 Aligned_cols=205 Identities=15% Similarity=0.125 Sum_probs=149.1
Q ss_pred hhcccceeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHH
Q 019931 103 TFARQFKRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAA 177 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~A 177 (334)
.++.+|+++|||++++ ..+..+|.|++++.+. ..+...+.. .| ..+.+++.+.+.+.+| .+.++++++|++|
T Consensus 17 ~~d~~g~~~idl~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 17 KWTRYGQGVLPLWVAE-SDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp HHHSSCTTSEECCSSC-CCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred eeeccCCCeeeecccC-CCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 3556679999999986 6777899999987654 233323322 33 3333444444443332 4578899999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC---CHHHHHHHHhcCCCCcE
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC---DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~---D~~~Le~~l~~~~~~~~ 254 (334)
+..++.++.++ ||.|++..+.|.+....++.. |.+++.++.+ |+++|++++++ +++
T Consensus 94 ~~~~~~~~~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~d~~~l~~~l~~---~~~ 152 (377)
T 3fdb_A 94 LYIAIDHFTPA--------------QSKVIVPTPAYPPFFHLLSAT----QREGIFIDATGGINLHDVEKGFQA---GAR 152 (377)
T ss_dssp HHHHHHHHSCT--------------TCCEEEEESCCTHHHHHHHHH----TCCEEEEECTTSCCHHHHHHHHHT---TCC
T ss_pred HHHHHHHhcCC--------------CCEEEEcCCCcHhHHHHHHHc----CCEEEEccCCCCCCHHHHHHHhcc---CCC
Confidence 99999988764 677888888888888887776 8888888886 99999999986 578
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC-cccccccCCC-CCccEEEecCcccccCCc-
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG-GGVAEQFNCE-RDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G-~g~~~~~~~~-~~~Div~~SlsKa~G~~G- 328 (334)
+|++++++|++|.+.| +++|+++|++||++||+||+|+...++ | ........+. .+.++++.||||++|+.|
T Consensus 153 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 230 (377)
T 3fdb_A 153 SILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD--GQHTVAAGVSDTAASVCITITAPSKAWNIAGL 230 (377)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS--SCCCCGGGSCHHHHHHEEEEECSTTTTTCGGG
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC--CCCCcccHHHccCCCcEEEEEeChHhccCcch
Confidence 8888899999999886 667788899999999999999975443 3 2211111111 234588999999998766
Q ss_pred --cEEee
Q 019931 329 --GFIAC 333 (334)
Q Consensus 329 --G~i~~ 333 (334)
||+++
T Consensus 231 r~G~~~~ 237 (377)
T 3fdb_A 231 KCAQIIF 237 (377)
T ss_dssp CCEEEEC
T ss_pred hheEEEe
Confidence 76553
No 53
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.88 E-value=1.1e-22 Score=198.44 Aligned_cols=191 Identities=16% Similarity=0.119 Sum_probs=144.4
Q ss_pred CHHHHHHHHHhcC-------CCCccccccCchHHH--HHHHHHHHhHhC----------CCcEEEeccHHHHHHHHHHHH
Q 019931 125 HPTIAKAAARHGM-------GPRGSALICGYTNYH--RLLESCLADLKK----------KEDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 125 ~p~v~~a~~~~g~-------g~~~sr~~~G~~~~~--~~LE~~La~~~g----------~e~alv~~sG~~An~~ai~al 185 (334)
+|.+.++++++.. |+++++...++.+.+ .+|+++|+++++ .++++++++|++||..++.++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l 131 (435)
T 3piu_A 52 FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCL 131 (435)
T ss_dssp HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHh
Confidence 6778888877644 333344444444433 789999999887 567899999999999999998
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHH-HhhhcCCcEEEEeeCC-------CHHHHHHHHhcC---CCCcE
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIR-IAERTKMVEVFVYKHC-------DMSHLKTLLSCC---TMRKK 254 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~-ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~---~~~~~ 254 (334)
+++ +|.|+++.+.|.++...+. .. |.+++.++++ |+++|++++++. ..+++
T Consensus 132 ~~~--------------gd~vl~~~p~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 193 (435)
T 3piu_A 132 ADP--------------GEAVLIPTPYYPGFDRDLKWRT----GVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVK 193 (435)
T ss_dssp CCT--------------TCEEEEEESCCTTHHHHTTTTT----CCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cCC--------------CCeEEECCCccccHHHHHHHhc----CCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeE
Confidence 764 7889999999998887766 44 8889888874 899999998752 23688
Q ss_pred EEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---------CCccEEEecCcc
Q 019931 255 VVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---------RDVDICVGTLSK 322 (334)
Q Consensus 255 lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---------~~~Div~~SlsK 322 (334)
+|++++++||+|.+.| +++|+++|++||++||+||+|+.++++............. ++.+++++||||
T Consensus 194 ~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK 273 (435)
T 3piu_A 194 GVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSK 273 (435)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSS
T ss_pred EEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeec
Confidence 9999999999999877 5788899999999999999999876653222211111111 334588999999
Q ss_pred cccCCc---cEEee
Q 019931 323 AAGCQG---GFIAC 333 (334)
Q Consensus 323 a~G~~G---G~i~~ 333 (334)
+||..| |++++
T Consensus 274 ~~g~~G~r~G~~~~ 287 (435)
T 3piu_A 274 DLGLPGFRVGAIYS 287 (435)
T ss_dssp SSCCGGGCEEEEEE
T ss_pred ccCCCceeEEEEEe
Confidence 998766 88876
No 54
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.88 E-value=3.4e-22 Score=195.64 Aligned_cols=207 Identities=17% Similarity=0.118 Sum_probs=145.5
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccc--cccCchHHHHHHHHHHHhHh----C--CCcEEEeccHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSA--LICGYTNYHRLLESCLADLK----K--KEDCLLCPTGFAAN 178 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr--~~~G~~~~~~~LE~~La~~~----g--~e~alv~~sG~~An 178 (334)
.|+++|||+++ +.++..+|.|++++.+.-.....+. ..++....+.+|++++++++ + .+.+++++++++++
T Consensus 67 ~~~~~i~l~~g-~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al 145 (449)
T 3qgu_A 67 PDAKIISLGIG-DTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDI 145 (449)
T ss_dssp TTCCCEECSSC-CCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHH
T ss_pred CCCCEEEeeCC-CCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHH
Confidence 35889999998 4889899999997754321100001 11122233578999999987 3 34566667777777
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE----------EEEeeCCCHHHHHHHHhc
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE----------VFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~----------v~~~~~~D~~~Le~~l~~ 248 (334)
..+ .+++++ +|.|+++.+.|.++...++.. +.+ ++.+++++.+.+...+.+
T Consensus 146 ~~~-~~l~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (449)
T 3qgu_A 146 ARI-QMMFGS--------------KPTVAVQDPSYPVYVDTSVMM----GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSK 206 (449)
T ss_dssp HHH-HHHHCS--------------SSCEEEEESCCTHHHHHHHHH----TCSCCBCSSSBTTEEEEECCGGGTTCCCGGG
T ss_pred HHH-HHHhCC--------------CCEEEEcCCCChhHHHHHHHc----CCcccccccccceeEEEecccccCCcCChhH
Confidence 766 777654 788888889999988888877 666 788887644333222222
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
. +++++|++++++||+|.+.+ +++|+++|++||++||+||+|+.+.++..+......+....+++|++.||||+||
T Consensus 207 ~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 285 (449)
T 3qgu_A 207 A-KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAG 285 (449)
T ss_dssp C-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGT
T ss_pred c-CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcC
Confidence 2 36788888899999999887 7788899999999999999999865543222222223323456799999999999
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 286 ~~G~r~G~~~~~ 297 (449)
T 3qgu_A 286 FTGVRLGWTVVP 297 (449)
T ss_dssp CTTCCCEEEECC
T ss_pred CccceeEEEecC
Confidence 777 898764
No 55
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.88 E-value=1.3e-21 Score=191.86 Aligned_cols=211 Identities=15% Similarity=0.110 Sum_probs=147.5
Q ss_pred hcccceeEEEeecC---ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHHH
Q 019931 104 FARQFKRLLLFSGN---DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAAN 178 (334)
Q Consensus 104 ~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~An 178 (334)
++.+|++|+||+++ .++|+. ||+|++|+.++-.....+++..+..+...+|+++|+++++ .+.+++++||++|+
T Consensus 45 ~d~~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~ 123 (449)
T 3a8u_X 45 VDDKGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECA 123 (449)
T ss_dssp EETTCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHH
T ss_pred EECCCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHH
Confidence 45677999999875 478987 9999998876533211233324556788999999999995 46788889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh-----c-----CCcEEEEee----CC----C--
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER-----T-----KMVEVFVYK----HC----D-- 238 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~-----~-----~g~~v~~~~----~~----D-- 238 (334)
..+++++..... ..+. .+++.+|+.+..+|+.+...+.+... . .+..++.++ ++ |
T Consensus 124 ~~al~~~~~~~~--~~g~---~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~ 198 (449)
T 3a8u_X 124 LTAVKMVRAYWR--LKGQ---ATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK 198 (449)
T ss_dssp HHHHHHHHHHHH--HTTC---TTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCS
T ss_pred HHHHHHHHHHHH--hcCC---CCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChH
Confidence 999988754100 0000 01245666688899887766655410 0 023333322 21 5
Q ss_pred ------HHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcc-cccc
Q 019931 239 ------MSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG-VAEQ 306 (334)
Q Consensus 239 ------~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g-~~~~ 306 (334)
+++||+++++.. +++++|++++++|++|.+.| +++|+++|++||++||+||+|+. +|++|.. ..++
T Consensus 199 ~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~--~g~~g~~~~~~~ 276 (449)
T 3a8u_X 199 EGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITG--FGRTGSMFGADS 276 (449)
T ss_dssp SSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccC--ccccCcchhhhh
Confidence 899999987432 26789999999999998888 99999999999999999999962 4555543 2355
Q ss_pred cCCCCCccEEEecCcccccC
Q 019931 307 FNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~ 326 (334)
+++.+ |++ ||||+|++
T Consensus 277 ~~~~~--di~--s~sK~l~~ 292 (449)
T 3a8u_X 277 FGVTP--DLM--CIAKQVTN 292 (449)
T ss_dssp HTCCC--SEE--EECGGGGT
T ss_pred cCCCC--CEE--EEcccccC
Confidence 66544 555 89999975
No 56
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=1.8e-21 Score=188.24 Aligned_cols=184 Identities=17% Similarity=0.170 Sum_probs=142.4
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCe
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKI 204 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd 204 (334)
.+.+.+++..+......+.+..+..+..+++++++++++|.++++++++|++|+..++.++.++ ||
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~--------------gd 104 (398)
T 2rfv_A 39 FDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQ--------------GD 104 (398)
T ss_dssp CSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TC
T ss_pred cCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CC
Confidence 3555666554433333333333356888999999999999999999999999999999988754 78
Q ss_pred EEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCE
Q 019931 205 AIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFL 284 (334)
Q Consensus 205 ~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~ 284 (334)
.|++....|.++...+.......|.+++.++.+|+++|++.+++ ++++|++++++|++|.+.|+++|.++|++||++
T Consensus 105 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 181 (398)
T 2rfv_A 105 HIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRP---ETKVVYIETPANPTLSLVDIETVAGIAHQQGAL 181 (398)
T ss_dssp EEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCT---TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCE
T ss_pred EEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 88888889988877662111112889999999999999998864 789999999999999999999999999999999
Q ss_pred EEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 285 LVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 285 LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+|+||+|+.+.++. . . ..++|+++.|+||+|++. ||+++++
T Consensus 182 li~De~~~~~~~~~---~----~--~~~~di~~~s~sK~~~~~g~~~~G~~~~~ 226 (398)
T 2rfv_A 182 LVVDNTFMSPYCQQ---P----L--QLGADIVVHSVTKYINGHGDVIGGIIVGK 226 (398)
T ss_dssp EEEECTTTCTTTCC---G----G--GGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred EEEECCCcccccCC---c----h--hhCCcEEEEeCcccccCCCCceEEEEEEC
Confidence 99999999876532 1 1 124689999999999753 5888764
No 57
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.88 E-value=2.5e-21 Score=185.83 Aligned_cols=200 Identities=12% Similarity=0.070 Sum_probs=142.8
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMA 180 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ 180 (334)
.+|+++|||++++ ..+..+|+|++++.+.- .+..++....|...+.+++.+.+.+.+| .+.++++++|++|+..
T Consensus 28 ~~g~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~ 106 (391)
T 3h14_A 28 EAGRRIIHMEVGQ-PGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLL 106 (391)
T ss_dssp HTTCCCEECCCSS-CSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred hcCCCeEEccCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHH
Confidence 3458999999987 56777999999886643 2222232233333444444444443333 3578899999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCc
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~ 253 (334)
++.+++++ ||.|++..+.|.+....++.. |.+++.++.+ |+++|+++ ++
T Consensus 107 ~~~~l~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~------~~ 162 (391)
T 3h14_A 107 AFTALFDS--------------GDRVGIGAPGYPSYRQILRAL----GLVPVDLPTAPENRLQPVPADFAGL------DL 162 (391)
T ss_dssp HHHHHCCT--------------TCEEEEEESCCHHHHHHHHHT----TCEEEEEECCGGGTTSCCHHHHTTS------CC
T ss_pred HHHHhcCC--------------CCEEEEcCCCCccHHHHHHHc----CCEEEEeecCcccCCCCCHHHHHhc------CC
Confidence 99988764 788888888888888777766 8888888864 56665543 57
Q ss_pred EEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--
Q 019931 254 KVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
++|++++++||+|.+.| +++|+++|++||++||+||+|+...++........ . .+.+|+++||||++|..|
T Consensus 163 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~-~~~~i~~~s~sK~~g~~G~r 238 (391)
T 3h14_A 163 AGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE---L-TDECYVINSFSKYFSMTGWR 238 (391)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG---T-CSSSEEEEESSSTTCCTTSC
T ss_pred eEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh---c-CCCEEEEEechhccCCccce
Confidence 88888899999999988 88899999999999999999997655432222222 2 344699999999998666
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 239 ~G~~~~~ 245 (391)
T 3h14_A 239 VGWMVVP 245 (391)
T ss_dssp CEEEECC
T ss_pred eEEEEeC
Confidence 888763
No 58
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.88 E-value=1.2e-21 Score=187.31 Aligned_cols=197 Identities=14% Similarity=0.104 Sum_probs=151.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
..++||+++.. .+..+|.+++++.+.-... . .++......+|+++++++++.+ .++++++|++|+..++.++.
T Consensus 25 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~--~--~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~ 99 (381)
T 1v2d_A 25 LGAVNLGQGFP-SNPPPPFLLEAVRRALGRQ--D--QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV 99 (381)
T ss_dssp HTCEECCCCSC-SSCCCHHHHHHHHHHTTTS--C--SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHHHh--c--CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC
Confidence 35789998863 6668899999887654321 1 1222223578999999999864 68888999999999999886
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC--------CHHHHHHHHhcCCCCcEEEEE
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC--------DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~--------D~~~Le~~l~~~~~~~~lVv~ 258 (334)
.+ +|.|++..+.|.++...++.. |.+++.++.+ |+++|++++++ ++++|++
T Consensus 100 ~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~~~l~~---~~~~v~~ 158 (381)
T 1v2d_A 100 GP--------------GDEVVVLEPFFDVYLPDAFLA----GAKARLVRLDLTPEGFRLDLSALEKALTP---RTRALLL 158 (381)
T ss_dssp CT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECEEETTEEECCHHHHHTTCCT---TEEEEEE
T ss_pred CC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEEeCCCCCccCCcCHHHHHHhcCc---CCEEEEE
Confidence 54 778888888888887776665 7888777653 78888887753 6889998
Q ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEe
Q 019931 259 DSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 259 e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
++++|++|.+.| +++|+++|++||++||+||+|+.+.+|..+..+... ..++|++++||||+||+.| ||++
T Consensus 159 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~---~~~~~~~~~s~sK~~~~~G~r~G~~~ 235 (381)
T 1v2d_A 159 NTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF---APERTFTVGSAGKRLEATGYRVGWIV 235 (381)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH---CTTTEEEEEEHHHHTTCGGGCCEEEE
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh---cCCCEEEEeechhhcCCcccceEEEE
Confidence 999999999877 889999999999999999999977665443333322 3457899999999998665 8887
Q ss_pred eC
Q 019931 333 CR 334 (334)
Q Consensus 333 ~~ 334 (334)
++
T Consensus 236 ~~ 237 (381)
T 1v2d_A 236 GP 237 (381)
T ss_dssp CC
T ss_pred eC
Confidence 63
No 59
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.88 E-value=4.1e-21 Score=182.27 Aligned_cols=197 Identities=14% Similarity=0.105 Sum_probs=152.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
+++|||++|++ .+..+|.+++++.+.-.....+ ..+...+++++++++++. +.++++++|++|+..++.++.
T Consensus 32 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~y-----~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~ 105 (363)
T 3ffh_A 32 TKITKLSSNEN-PLGTSKKVAAIQANSSVETEIY-----PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLL 105 (363)
T ss_dssp SCCEECSSCSC-TTCCCHHHHHHHHTCBSCCCBC---------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CceEEccCCCC-CCCCCHHHHHHHHHHHHHhhcC-----CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHc
Confidence 68999999864 5667899999988754322111 123458899999999995 568888999999999999886
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ +|.|++..+.|.++...++.. |.+++.++.+ |+++|++++++ ++++|+++++
T Consensus 106 ~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~v~~~~p 164 (363)
T 3ffh_A 106 DT--------------TTNTVMATPTFVQYRQNALIE----GAEVREIPLLQDGEHDLEGMLNAIDE---KTTIVWICNP 164 (363)
T ss_dssp ST--------------TCEEEEEESSCHHHHHHHHHH----TCEEEEEECCTTSCCCHHHHHHHCCT---TEEEEEEESS
T ss_pred cC--------------CCEEEEcCCChHHHHHHHHHc----CCEEEEecCCCCCCcCHHHHHHhccc---CCCEEEEeCC
Confidence 64 778888888888888877776 8899998876 89999998864 7899999999
Q ss_pred CCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+|++|.+.|+++|.++++.+ |+++|+||+|+.++++ ...+...... .++.+|++.||||.+|..| ||++++
T Consensus 165 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 240 (363)
T 3ffh_A 165 NNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTP-QPEKHEKLVR-TYKNLIITRTFSKIYGLASARVGYGIAD 240 (363)
T ss_dssp CTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSS-CCCCCGGGGG-TCTTEEEEEESSSTTCCSSCCCEEEEEC
T ss_pred CCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCc-cccCHHHHhh-cCCCEEEEeechhhhcCchhceeeeecC
Confidence 99999999999999999888 9999999999965442 1122222222 2444688999999998766 888753
No 60
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.87 E-value=1.7e-21 Score=190.69 Aligned_cols=161 Identities=17% Similarity=0.093 Sum_probs=133.0
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
..+..++||++|++++|.+++++++||++|+..++.+++++ ||.|++....|......+.......
T Consensus 79 ~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~~~--------------Gd~Vi~~~~~y~~~~~~~~~~~~~~ 144 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGA--------------GDRLVAARSLFGSCFVVCSEILPRW 144 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCT--------------TCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEcCCccchHHHHHHHHHHHc
Confidence 45788999999999999999999999999999999887654 7778877777777665554311223
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+.+++.++.+|+++|++++++ ++++|++++++||+|.+.|+++|+++|+++|++||+|++|+.+.+..
T Consensus 145 g~~~~~v~~~d~~~l~~ai~~---~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~--------- 212 (414)
T 3ndn_A 145 GVQTVFVDGDDLSQWERALSV---PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ--------- 212 (414)
T ss_dssp TCEEEEECTTCHHHHHHHTSS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---------
T ss_pred CcEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC---------
Confidence 889999999999999999874 78999999999999999999999999999999999999999764321
Q ss_pred CCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
.+..++|+++.|+||+||+. ||+++++
T Consensus 213 ~~~~g~div~~S~sK~l~~~G~~~~G~vv~~ 243 (414)
T 3ndn_A 213 GFPLGVDVVVYSGTKHIDGQGRVLGGAILGD 243 (414)
T ss_dssp CGGGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred chhcCCCeEeccCCccccCCCCceEEEEEEC
Confidence 11234689999999999764 4888764
No 61
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.87 E-value=2.9e-21 Score=185.57 Aligned_cols=202 Identities=13% Similarity=0.072 Sum_probs=151.3
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-CC----CCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-MG----PRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g----~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An 178 (334)
++++|||+++ +..+..+|.+++++++.- .+ ..++....|...+.+++.+.+.+.+| .+.++++++|++|+
T Consensus 34 ~~~~i~l~~~-~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al 112 (398)
T 3ele_A 34 KENVYDFSIG-NPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASL 112 (398)
T ss_dssp GGGCEECCSC-CCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred CCCeEEeecC-CCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHH
Confidence 3789999998 577778999999775532 11 12233345555666666666666655 35688889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCC-eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEK-IAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTM 251 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~g-d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~ 251 (334)
..++.+++.+ | |.|++..+.|..+...++.. |.+++.++.+ |+++|++++++
T Consensus 113 ~~~~~~l~~~--------------g~d~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~--- 171 (398)
T 3ele_A 113 SICFRALTSD--------------AYDEFITIAPYFPEYKVFVNAA----GARLVEVPADTEHFQIDFDALEERINA--- 171 (398)
T ss_dssp HHHHHHHCCS--------------TTCEEEEESSCCTHHHHHHHHT----TCEEEEECCCTTTSSCCHHHHHHTCCT---
T ss_pred HHHHHHHcCC--------------CCCEEEEeCCCchhhHHHHHHc----CCEEEEEecCCcCCcCCHHHHHHHhCc---
Confidence 9999988764 7 88888888888888877766 8888888764 78888888764
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHH------cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcc
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRK------YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSK 322 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k------~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsK 322 (334)
++++|++++++||+|.+.| +++|+++|++ ||++||+||+|+...++ |......... .+.+|+++||||
T Consensus 172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~-~~~~i~~~s~sK 248 (398)
T 3ele_A 172 HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYD--GIKVPFVTKY-YDNTLVCYSYSK 248 (398)
T ss_dssp TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCT--TCCCCCGGGT-CSSEEEEEESTT
T ss_pred CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccC--CCCcCChHhh-cCCeEEEEehhh
Confidence 7899999999999999988 6777899999 99999999999975553 3222111121 235699999999
Q ss_pred cccCCc---cEEeeC
Q 019931 323 AAGCQG---GFIACR 334 (334)
Q Consensus 323 a~G~~G---G~i~~~ 334 (334)
+||..| ||++++
T Consensus 249 ~~~~~G~r~G~~~~~ 263 (398)
T 3ele_A 249 SLSLPGERIGYVLVP 263 (398)
T ss_dssp TSSCTTTCCEEEECC
T ss_pred cCCCccceeEEEEEc
Confidence 998766 888763
No 62
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1.5e-22 Score=202.36 Aligned_cols=192 Identities=18% Similarity=0.179 Sum_probs=121.4
Q ss_pred EeecCccCCCCCCHHHHHHHH-----HhcCCCCccccccCchHHHHHHH----HHHHhHhCCCc----EEEe-ccHHHHH
Q 019931 113 LFSGNDYLGLSSHPTIAKAAA-----RHGMGPRGSALICGYTNYHRLLE----SCLADLKKKED----CLLC-PTGFAAN 178 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~-----~~g~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~----alv~-~sG~~An 178 (334)
.++|++|+ +|+|++|+. +|+.|..++|++.|+ +.+.+|| +++++++|.+. +.++ +||++||
T Consensus 59 lias~n~~----~~~V~eA~~~~l~~~y~~G~~g~r~~~G~-~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An 133 (490)
T 2a7v_A 59 LIASENFC----SRAALEALGSCLNNKYSEGYPGKRYYGGA-EVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPAN 133 (490)
T ss_dssp CCTTCCCC----CHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHH
T ss_pred EECCCCCC----CHHHHHHHHHHHcCCCccCCCcccccCcc-HHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHH
Confidence 34666763 899999763 477788888988886 4556777 89999999987 5555 6999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhH-HH-------HHHhhhcCCcEEEEee------CCCHHHHHH
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASII-DG-------IRIAERTKMVEVFVYK------HCDMSHLKT 244 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~-~g-------~~ls~~~~g~~v~~~~------~~D~~~Le~ 244 (334)
..++.+++++ ||.|+++.+.|.+.. ++ +.++. ...+++.|+ +.|+++|++
T Consensus 134 ~~al~al~~p--------------GD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g--~~~~~~~~~vd~~~~~iD~d~le~ 197 (490)
T 2a7v_A 134 LAVYTALLQP--------------HDRIMGLDLPDGGHLTHGYMSDVKRISATS--IFFESMPYKLNPKTGLIDYNQLAL 197 (490)
T ss_dssp HHHHHHHCCS--------------CEECCC---------------------------------CCBCTTTCSBCHHHHHH
T ss_pred HHHHHHHcCC--------------CCEecccCccccccccchhhhcchhHHHcC--CeEEEEecccccccCCcCHHHHHH
Confidence 9999999875 899999888876532 11 22331 112344453 349999999
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~ 324 (334)
++++. ++++|++..+.+ |...|+++|+++|++||++|++|+||..|+++. |.. ....+.+|++++|+||+|
T Consensus 198 ~l~~~--~~klIi~~~s~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~---g~~--~~~~~~aDiv~~S~hK~l 268 (490)
T 2a7v_A 198 TARLF--RPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAA---KVI--PSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp HHHHH--CCSEEEECCSSC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHT---TSS--CCGGGTCSEEEEESSGGG
T ss_pred HHhhc--CCcEEEEcCCCC--CCcccHHHHHHHHHHcCCEEEEccccccccccC---CcC--CCCCCCCCEEEECCcccC
Confidence 99753 467777665443 346789999999999999999999999886642 221 111136899999999999
Q ss_pred -cCCccEEeeC
Q 019931 325 -GCQGGFIACR 334 (334)
Q Consensus 325 -G~~GG~i~~~ 334 (334)
|..||+|+++
T Consensus 269 ~Gp~GG~i~~~ 279 (490)
T 2a7v_A 269 RGARSGLIFYR 279 (490)
T ss_dssp CSCSCEEEEEE
T ss_pred ccccchheeec
Confidence 5689999873
No 63
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.87 E-value=3.8e-21 Score=186.21 Aligned_cols=198 Identities=17% Similarity=0.114 Sum_probs=147.3
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGFAA 177 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~~A 177 (334)
+|++++||.++++ ++..+|.+++++ +.- .+...+....| ..+++++++++++ .+.++++++|++|
T Consensus 41 ~g~~~i~l~~~~~-~~~~~~~v~~a~-~~l~~~~~~y~~~~g----~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a 114 (409)
T 2gb3_A 41 RGVRIHHLNIGQP-DLKTPEVFFERI-YENKPEVVYYSHSAG----IWELREAFASYYKRRQRVDVKPENVLVTNGGSEA 114 (409)
T ss_dssp TTCEEEECSSCCC-CSCCCTHHHHHH-HHTCCSSCCCCCTTC----CHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHH
T ss_pred cCCCEEeccCCCC-CCCCCHHHHHHH-HHHhcCCCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHH
Confidence 4589999999986 666789999988 543 22222222222 3567777777653 2578899999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC------HHHHHHHHhcCCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD------MSHLKTLLSCCTM 251 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D------~~~Le~~l~~~~~ 251 (334)
+..++.++.++ ||.|++..+.|.++...++.. |.+++.++.++ +++|++++++
T Consensus 115 ~~~~~~~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~l~~~l~~--- 173 (409)
T 2gb3_A 115 ILFSFAVIANP--------------GDEILVLEPFYANYNAFAKIA----GVKLIPVTRRMEEGFAIPQNLESFINE--- 173 (409)
T ss_dssp HHHHHHHHCCT--------------TCEEEEEESCCTHHHHHHHHH----TCEEEEEECCGGGTSCCCTTGGGGCCT---
T ss_pred HHHHHHHhCCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEeccCCCCCCccHHHHHHhhCc---
Confidence 99999988654 788888888888888887776 78888888652 5677776653
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
++++|++++++|++|.+.| +++|+++|++||++||+||+|+.+.++....++ ..++ .+.||+++||||+||+.|
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~--~~~~-~~~~i~~~s~sK~~g~~G 250 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA--LSIE-SDKVVVIDSVSKKFSACG 250 (409)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG--GGSC-CTTEEEEEESTTTTTCGG
T ss_pred CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc--cccC-CCCEEEEecchhccCCcc
Confidence 6888899999999998865 889999999999999999999986553211121 1122 346899999999998666
Q ss_pred ---cEEeeC
Q 019931 329 ---GFIACR 334 (334)
Q Consensus 329 ---G~i~~~ 334 (334)
|+++++
T Consensus 251 ~r~G~~~~~ 259 (409)
T 2gb3_A 251 ARVGCLITR 259 (409)
T ss_dssp GCCEEEECS
T ss_pred ceEEEEEEC
Confidence 888764
No 64
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.87 E-value=1.8e-21 Score=190.09 Aligned_cols=199 Identities=16% Similarity=0.147 Sum_probs=148.7
Q ss_pred cceeEEEeecCccC---CCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHhC-------CCcEEEeccH
Q 019931 107 QFKRLLLFSGNDYL---GLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLKK-------KEDCLLCPTG 174 (334)
Q Consensus 107 ~g~~~l~f~sn~yL---gl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~g-------~e~alv~~sG 174 (334)
.++++|||+.+++. .+..+|.|++++.+.-. + ..++.. .....+++++++++++ .+.++++++|
T Consensus 52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~----~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~ 127 (427)
T 3dyd_A 52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAP----SIGFLSSREEIASYYHCPEAPLEAKDVILTSGC 127 (427)
T ss_dssp TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCC----TTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSH
T ss_pred CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCC----CCCcHHHHHHHHHHHhhcCCCCChHHEEEecCc
Confidence 45889999998864 46788999998765421 1 111211 2234778889999887 4578888999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHh
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLS 247 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~ 247 (334)
++|+..++.++.++ +|.|++..+.|......++.. |.+++.++.. |+++|+++++
T Consensus 128 t~al~~~~~~l~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~ 189 (427)
T 3dyd_A 128 SQAIDLCLAVLANP--------------GQNILVPRPGFSLYKTLAESM----GIEVKLYNLLPEKSWEIDLKQLEYLID 189 (427)
T ss_dssp HHHHHHHHHHHCCT--------------TCEEEEEESCCTHHHHHHHHT----TCEEEEEEEEGGGTTEECHHHHHSSCC
T ss_pred HHHHHHHHHHhcCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEEecccccCCCCCHHHHHHHhc
Confidence 99999999988764 777888778887777777666 7888877652 7888887775
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccc--cccCCCCCccEEEecCcc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA--EQFNCERDVDICVGTLSK 322 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~--~~~~~~~~~Div~~SlsK 322 (334)
+ ++++|++.+++||+|.+.| +++|+++|++||+++|+||+|+...++ |.... ..++..++ .|+++||||
T Consensus 190 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~--g~~~~~~~~~~~~~~-vi~~~S~sK 263 (427)
T 3dyd_A 190 E---KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS--DCKYEPLATLSTDVP-ILSCGGLAK 263 (427)
T ss_dssp T---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS--SCCCCCGGGGCSSCC-EEEEEESTT
T ss_pred c---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC--CCcCccHHHhCCCCc-EEEEeeccc
Confidence 4 6888889999999999999 999999999999999999999975443 33322 22222222 377899999
Q ss_pred cccCCc---cEEee
Q 019931 323 AAGCQG---GFIAC 333 (334)
Q Consensus 323 a~G~~G---G~i~~ 333 (334)
+||+.| |++++
T Consensus 264 ~~~~~G~riG~~~~ 277 (427)
T 3dyd_A 264 RWLVPGWRLGWILI 277 (427)
T ss_dssp TSSCGGGCCEEEEE
T ss_pred cCCCcCcceEEEEe
Confidence 998776 88765
No 65
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.87 E-value=5.1e-21 Score=181.78 Aligned_cols=198 Identities=12% Similarity=0.095 Sum_probs=146.4
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcC-C--CC--ccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGM-G--PR--GSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVI 182 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g--~~--~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai 182 (334)
.|+|++++. ..+|.|++++.++-. + .. .++..++......++++++++++|.+ .++++++|++|+..++
T Consensus 3 ~yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~ 78 (384)
T 1eg5_A 3 VYFDNNATT----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWIL 78 (384)
T ss_dssp EECBTTTCC----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHH
T ss_pred EEEecCccC----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH
Confidence 356665553 468999997765421 1 11 12222333566789999999999965 7888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv 257 (334)
.++... ...+||.|++....|.+....+..... .|.+++.++. .|+++|++++++ ++++|+
T Consensus 79 ~~~~~~----------~~~~gd~vl~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~~v~ 144 (384)
T 1eg5_A 79 KTVAET----------FEKRKRTIITTPIEHKAVLETMKYLSM-KGFKVKYVPVDSRGVVKLEELEKLVDE---DTFLVS 144 (384)
T ss_dssp HHHHHH----------TTTTCCEEEECTTSCHHHHHHHHHHHH-TTCEEEECCBCTTSCBCHHHHHHHCCT---TEEEEE
T ss_pred Hhhhhh----------ccCCCCEEEECCCCchHHHHHHHHHHh-cCCEEEEEccCCCCccCHHHHHHHhCC---CCeEEE
Confidence 988720 001378899898999887766632211 1788888876 378999988864 689999
Q ss_pred EcCCCCCCCCccCHHHHHHHHHHcC--CEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEee
Q 019931 258 TDSLFSMDGDFAPMVELVKLRRKYG--FLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 258 ~e~v~n~~G~~~pL~~L~ela~k~g--a~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
+++++|++|.+.|+++|.++|++|| ++||+||+|++|.. .. ++. .++|+++.|+||.+|+.| |++++
T Consensus 145 ~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~---~~------~~~~~~~di~~~s~sK~~g~~G~G~~~~ 215 (384)
T 1eg5_A 145 IMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKI---PF------SLEKLEVDYASFSAHKFHGPKGVGITYI 215 (384)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTS---CC------CCTTTCCSEEEEEGGGGTSCTTCEEEEE
T ss_pred EECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCc---cc------CchhcCCCEEEecHHHhcCCCceEEEEE
Confidence 9999999999999999999999999 99999999985421 11 111 246899999999999877 88876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 216 ~ 216 (384)
T 1eg5_A 216 R 216 (384)
T ss_dssp C
T ss_pred c
Confidence 4
No 66
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.87 E-value=1.5e-21 Score=190.17 Aligned_cols=208 Identities=19% Similarity=0.147 Sum_probs=147.0
Q ss_pred cccceeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHHHH
Q 019931 105 ARQFKRLLLFSGND---YLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFAAN 178 (334)
Q Consensus 105 ~~~g~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~An 178 (334)
+.+|++|+||+++. +||+ .||+|++++.+.- .+...+ ..+..+.+.+|+++|+++++ .+.+++++||++|+
T Consensus 39 d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~ 115 (433)
T 1zod_A 39 DADGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLF--SEMLSRPVVDLATRLANITPPGLDRALLLSTGAESN 115 (433)
T ss_dssp CTTCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCC--TTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHH
T ss_pred eCCCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcccc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence 45679999997764 6786 6999999775432 111111 23335778999999999997 46788889999999
Q ss_pred HHHHHHHhh-hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------cCCcEEEEee------CC-----
Q 019931 179 MAVIVAVGN-IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER---------TKMVEVFVYK------HC----- 237 (334)
Q Consensus 179 ~~ai~al~~-~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~~g~~v~~~~------~~----- 237 (334)
..+++++.. + +++.+|+.+..+|+.....+.+... ..+...+.++ ++
T Consensus 116 ~~a~~~~~~~~------------~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 183 (433)
T 1zod_A 116 EAAIRMAKLVT------------GKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAY 183 (433)
T ss_dssp HHHHHHHHHHH------------TCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEE
T ss_pred HHHHHHHHHhh------------CCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhh
Confidence 999986542 2 1345777888899887665544210 0133333332 23
Q ss_pred ----CHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-cccc
Q 019931 238 ----DMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQF 307 (334)
Q Consensus 238 ----D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~ 307 (334)
|+++|++++++.. +++++|++++++|++|.+.| +++|+++|++||++||+||+|+. +|++|... .+++
T Consensus 184 ~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~--~g~~g~~~~~~~~ 261 (433)
T 1zod_A 184 DYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTG--VGRTGTMFACQRD 261 (433)
T ss_dssp CHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSTHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC--CCcCchHhHHhhc
Confidence 3889999887421 36789999999999998776 99999999999999999999983 45555533 3555
Q ss_pred CCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++.+ |++ ||||+||+ | |+++++
T Consensus 262 ~~~~--di~--s~sK~~~~-G~~ig~~~~~ 286 (433)
T 1zod_A 262 GVTP--DIL--TLSKTLGA-GLPLAAIVTS 286 (433)
T ss_dssp TCCC--SEE--EECHHHHT-TSSCEEEEEC
T ss_pred CCCC--CEE--EecccccC-CCCeeEEEEh
Confidence 6544 444 89999986 5 787764
No 67
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.87 E-value=4.1e-21 Score=186.83 Aligned_cols=156 Identities=18% Similarity=0.174 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHH----HHHHhh
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIID----GIRIAE 224 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~----g~~ls~ 224 (334)
.+..++|++++++++|.++++++++|++|+..++.+++++ ||.|++..+.|.++.. .++..
T Consensus 61 ~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~~~--------------gd~Vl~~~~~y~~~~~~~~~~~~~~- 125 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTILKA--------------GDHLISDECLYGCTHALFEHALTKF- 125 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEESCCCHHHHHHHHTHHHHT-
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHhCC--------------CCEEEEeCCCchhHHHHHHHHHHHc-
Confidence 5777899999999999999999999999999999988764 7888888888888776 34434
Q ss_pred hcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH-cCCEEEEecCcccccccCCCccc
Q 019931 225 RTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK-YGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 225 ~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k-~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
|.+++.++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+||+|+.+++.. .+
T Consensus 126 ---g~~~~~v~~~d~~~l~~~i~~---~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~---~~ 196 (404)
T 1e5e_A 126 ---GIQVDFINTAIPGEVKKHMKP---NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN---PV 196 (404)
T ss_dssp ---TCEEEEECTTSTTHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC---GG
T ss_pred ---CCEEEEECCCCHHHHHHhcCC---CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCC---cc
Confidence 889999999999999998864 78999999999999999999999999999 999999999999875421 11
Q ss_pred ccccCCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 304 AEQFNCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
..++||++.|+||+||+. ||+++++
T Consensus 197 ------~~~~di~~~S~sK~~~~~g~ri~G~~~~~ 225 (404)
T 1e5e_A 197 ------DFGVDVVVHSATKYINGHTDVVAGLICGK 225 (404)
T ss_dssp ------GGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred ------ccCCEEEEEcCccccCCCCCCeEEEEEEC
Confidence 124789999999999864 5888764
No 68
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.87 E-value=4.1e-22 Score=194.16 Aligned_cols=206 Identities=17% Similarity=0.132 Sum_probs=140.2
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHh----cCCCCccccccCchHHHHHHHHHHHhHh----CC--CcEEEeccHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARH----GMGPRGSALICGYTNYHRLLESCLADLK----KK--EDCLLCPTGFAA 177 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~----g~g~~~sr~~~G~~~~~~~LE~~La~~~----g~--e~alv~~sG~~A 177 (334)
++++|||++++|. +..+|.|++++.++ +.+.+.+ .++....+.+|++++++++ +. +.++++++++++
T Consensus 55 ~~~~i~l~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~a 131 (432)
T 3ei9_A 55 DAQVISLGIGDTT-EPIPEVITSAMAKKAHELSTIEGYS--GYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCD 131 (432)
T ss_dssp TCCCEECSSCCCC-SCCCHHHHHHHHHHHHHTTSTTTCC--CCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHH
T ss_pred CCCeEEccCCCCC-CCCCHHHHHHHHHHHhcccccCCcc--CCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHH
Confidence 4789999999988 88999999976543 2222111 1122233467888888885 43 345555555555
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC---------cEEEEeeCCCHHHHHHHHhc
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM---------VEVFVYKHCDMSHLKTLLSC 248 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g---------~~v~~~~~~D~~~Le~~l~~ 248 (334)
+. ++.+++++ ||.|+++.+.|.++...++..... + .+++.+++++...+...+++
T Consensus 132 l~-~l~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 195 (432)
T 3ei9_A 132 IS-RLQVMFGS--------------NVTIAVQDPSYPAYVDSSVIMGQT-GQFNTDVQKYGNIEYMRCTPENGFFPDLST 195 (432)
T ss_dssp HH-HHHHHHCT--------------TCCEEEEESCCTHHHHHHHHHTCS-CCEETTTTEETTCEEEECCGGGTTSCCGGG
T ss_pred HH-HHHHHcCC--------------CCEEEEeCCCCHHHHHHHHHcCCc-ccccccccccCceEEeccCcccCCcCChhh
Confidence 55 46666654 788999999999999888877311 1 24566665432222111222
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
. +++++|++++++||+|.+.+ +++|+++|++||++||+||+|+.++++..+.++....+ .++.+|+++||||+||
T Consensus 196 ~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g 273 (432)
T 3ei9_A 196 V-GRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPG-AEEVAMETASFSNYAG 273 (432)
T ss_dssp C-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTT-GGGTEEEEEESHHHHC
T ss_pred C-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCC-CCCeEEEEecchhccC
Confidence 2 36788888899999998876 66778889999999999999998777654444433222 2345799999999999
Q ss_pred CCc---cEEeeC
Q 019931 326 CQG---GFIACR 334 (334)
Q Consensus 326 ~~G---G~i~~~ 334 (334)
+.| ||++++
T Consensus 274 ~~G~r~G~~~~~ 285 (432)
T 3ei9_A 274 FTGVRLGWTVIP 285 (432)
T ss_dssp TTTTCCEEEECC
T ss_pred CcccceEEEEEC
Confidence 878 998764
No 69
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.87 E-value=3.2e-21 Score=187.53 Aligned_cols=203 Identities=11% Similarity=-0.026 Sum_probs=149.2
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcC-CC-CccccccCchHHHHHHHHHHHhHhC--------CCcEEEeccHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGM-GP-RGSALICGYTNYHRLLESCLADLKK--------KEDCLLCPTGF 175 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~-~~sr~~~G~~~~~~~LE~~La~~~g--------~e~alv~~sG~ 175 (334)
.+|+++|||+++++ .+..+|.+++++.+.-. +. .++....|. .+++++++++++ .+.++++++|+
T Consensus 41 ~~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~----~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t 115 (437)
T 3g0t_A 41 ATGTKFCRMEMGVP-GLPAPQIGIETEIQKLREGVASIYPNLDGL----PELKQEASRFAKLFVNIDIPARACVPTVGSM 115 (437)
T ss_dssp HHTCCCEECCCCSC-CSCCCHHHHHHHHHHHHHTGGGSCCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESHHH
T ss_pred hcCCCEEeccCcCC-CCCCCHHHHHHHHHHHhCCcCcCCCCCCCh----HHHHHHHHHHHHHhhCCCCCcccEEEeCCHH
Confidence 34588999999985 67789999998765422 22 222222333 556666666665 45788889999
Q ss_pred HHHHHHHHHHh--hhhhhccCCCccCCCCCe--EEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHH
Q 019931 176 AANMAVIVAVG--NIASLLAGDEKSFKDEKI--AIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTL 245 (334)
Q Consensus 176 ~An~~ai~al~--~~~~~~~~~~~~~~~~gd--~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~ 245 (334)
+|+..++.+++ ++ || .|++..+.|.++...++.. |++++.++.+ |+++|+++
T Consensus 116 ~al~~~~~~l~~~~~--------------gd~~~Vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~ 177 (437)
T 3g0t_A 116 QGCFVSFLVANRTHK--------------NREYGTLFIDPGFNLNKLQCRIL----GQKFESFDLFEYRGEKLREKLESY 177 (437)
T ss_dssp HHHHHHHHHHTTSCT--------------TCSCCEEEEESCCHHHHHHHHHH----TCCCEEEEGGGGCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC--------------CCccEEEEeCCCcHhHHHHHHHc----CCEEEEEeecCCCCccCHHHHHHH
Confidence 99999999887 54 67 7777788888888887766 7788888763 78899998
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-----c-cccCCCCCccEE
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-----A-EQFNCERDVDIC 316 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-----~-~~~~~~~~~Div 316 (334)
++. +++++|++.+++||+|.+.| +++|+++|++||++||+||+|+.+.++. ...+ . ..+.-..+.+|+
T Consensus 178 l~~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 254 (437)
T 3g0t_A 178 LQT--GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANYTDNYIL 254 (437)
T ss_dssp HTT--TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGTCSCEEE
T ss_pred Hhc--CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCCCCcEEE
Confidence 843 36788888889999999887 7778999999999999999999766651 1111 0 111112455799
Q ss_pred EecCcccccCCc---cEEeeC
Q 019931 317 VGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 317 ~~SlsKa~G~~G---G~i~~~ 334 (334)
++||||.+|..| ||++++
T Consensus 255 ~~s~sK~~~~~G~r~G~~~~~ 275 (437)
T 3g0t_A 255 ALSSSKAFSYAGQRIGVLMIS 275 (437)
T ss_dssp EEESTTTTSCGGGCCEEEEEC
T ss_pred EEcCccCCCCccceeEEEEEC
Confidence 999999998666 888764
No 70
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.87 E-value=2e-21 Score=188.14 Aligned_cols=161 Identities=17% Similarity=0.134 Sum_probs=134.2
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
..+..+++|+++++++|.+++++++||++|+..++.+++++ +|.|++....|.++...++......
T Consensus 63 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~--------------gd~vl~~~~~~~~~~~~~~~~~~~~ 128 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRP--------------GDEVLLGNTLYGCTFAFLHHGIGEF 128 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEESSCCSHHHHHHHHTGGGG
T ss_pred CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhcC--------------CCEEEEeCCCchhHHHHHHHHHHHc
Confidence 45788999999999999999999999999999999988654 7788888888888776663221123
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+.+++.++..|+++|++.+++ ++++|++++++|++|.+.|+++|.++|++||+++|+|++|+.+.++. .
T Consensus 129 g~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~---~----- 197 (398)
T 1gc0_A 129 GVKLRHVDMADLQALEAAMTP---ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR---P----- 197 (398)
T ss_dssp TCEEEEECTTCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC---G-----
T ss_pred CCEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC---c-----
Confidence 788999998999999999864 78999999999999999999999999999999999999999876532 1
Q ss_pred CCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++|+++.|++|.||+. ||+++++
T Consensus 198 -~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~ 227 (398)
T 1gc0_A 198 -LELGADLVVHSATKYLSGHGDITAGIVVGS 227 (398)
T ss_dssp -GGGTCSEEEEETTTTTTCSSSCCCEEEEEC
T ss_pred -hhhCceEEEECCccccCCCCCCeEEEEEEC
Confidence 1224689999999999863 6888764
No 71
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=1e-20 Score=187.03 Aligned_cols=160 Identities=19% Similarity=0.147 Sum_probs=133.7
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|++++|.+.+++|+||++|+..++.+++++ ||.|++....|.++...+.......|
T Consensus 113 ~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~--------------Gd~Vi~~~~~y~~~~~~~~~~~~~~G 178 (445)
T 1qgn_A 113 NPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPA--------------GGHIVTTTDCYRKTRIFIETILPKMG 178 (445)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCS--------------SCEEEEETTSCHHHHHHHHHTGGGGT
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEcCCCchhHHHHHHHHHHHcC
Confidence 5778999999999999999999999999999999988764 77788777888877665442212238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCc-EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRK-KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~-~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
.+++.++.+|+++|++++++ ++ ++|++++++|++|.+.|+++|.++|++||++||+|++|+.+....
T Consensus 179 ~~v~~v~~~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~--------- 246 (445)
T 1qgn_A 179 ITATVIDPADVGALELALNQ---KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK--------- 246 (445)
T ss_dssp CEEEEECSSCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---------
T ss_pred CEEEEeCCCCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---------
Confidence 89999999999999999986 67 999999999999999999999999999999999999998764321
Q ss_pred CCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
....++||++.|++|.+|+. +|+++++
T Consensus 247 ~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~ 277 (445)
T 1qgn_A 247 ALALGADLVLHSATKFLGGHNDVLAGCISGP 277 (445)
T ss_dssp TTTTTCSEEEECTTTTTTCSSSCCCEEEEEC
T ss_pred ccccCCEEEEECCcccccccccceEEEEEEC
Confidence 12235789999999999874 6888764
No 72
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.87 E-value=2e-21 Score=190.40 Aligned_cols=160 Identities=18% Similarity=0.128 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+.+++||++||+++|.+.+++|+||++|+..++.+++++ ||.|++....|.+....+.......|
T Consensus 81 ~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~~~--------------Gd~Vi~~~~~y~~~~~~~~~~l~~~G 146 (415)
T 2fq6_A 81 TLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQ--------------GDHVLMTNTAYEPSQDFCSKILSKLG 146 (415)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCT--------------TCEEEEETTSCHHHHHHHHHTGGGGT
T ss_pred CchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 5788999999999999999999999999999999887764 78888777888776665532112238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQ 306 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~ 306 (334)
+++..++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|++ +|++||+|++|+.++... .
T Consensus 147 ~~v~~v~~~d~~~le~ai~~---~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~---p---- 216 (415)
T 2fq6_A 147 VTTSWFDPLIGADIVKHLQP---NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFK---A---- 216 (415)
T ss_dssp CEEEEECTTCGGGGGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSC---G----
T ss_pred cEEEEECCCCHHHHHHhhcc---CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCC---c----
Confidence 89999999999999998864 78999999999999999999999999999 999999999999764321 1
Q ss_pred cCCCCCccEEEecCcccccCC----ccEEeeC
Q 019931 307 FNCERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++||++.|++|++|+. ||+++++
T Consensus 217 --~~~g~Div~~S~sK~lg~~g~~~~G~l~~~ 246 (415)
T 2fq6_A 217 --LDFGIDVSIQAATKYLVGHSDAMIGTAVCN 246 (415)
T ss_dssp --GGGTCSEEEEETTTTTTCSSSCCCEEEEEC
T ss_pred --cccCCeEEEEeCccccCCCCCceEEEEEeC
Confidence 1235799999999999874 5888763
No 73
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.87 E-value=2.5e-21 Score=190.64 Aligned_cols=158 Identities=17% Similarity=0.100 Sum_probs=132.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|++++|.+.+++++||++|+..++.+++++ ||.|++....|.+....+.......|
T Consensus 81 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~--------------Gd~Vi~~~~~y~~~~~~~~~~~~~~G 146 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARA--------------GDSVVTTDRLFGHTLSLFQKTLPSFG 146 (430)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCT--------------TCEEEEETTCCHHHHHHHHTHHHHTT
T ss_pred CHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEcCCCchhHHHHHHHHHHHcC
Confidence 5788999999999999999999999999999999988765 78888888888877664431111228
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.+++.++.+|+++|++++++ ++++|++++++||+|.+.|+++|+++|+++|++||+|++|+.+.+-. .
T Consensus 147 ~~~~~v~~~d~~~l~~ai~~---~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~---------~ 214 (430)
T 3ri6_A 147 IEVRFVDVMDSLAVEHACDE---TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE---------A 214 (430)
T ss_dssp CEEEEECTTCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC---------G
T ss_pred CEEEEeCCCCHHHHHHhhCC---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---------h
Confidence 89999999999999999864 78999999999999999999999999999999999999999765411 1
Q ss_pred CCCCccEEEecCcccccC----CccEEe
Q 019931 309 CERDVDICVGTLSKAAGC----QGGFIA 332 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~----~GG~i~ 332 (334)
...++|+++.|++|++|+ .||+|+
T Consensus 215 ~~~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 215 KRLGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp GGGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred HHcCCEEEEECCcccccCCCCceEEEEE
Confidence 123468999999999985 678887
No 74
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.87 E-value=2e-21 Score=185.02 Aligned_cols=208 Identities=13% Similarity=0.016 Sum_probs=150.5
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAV 181 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~a 181 (334)
.+| ++|||++++ ..+..+|.+++++.+...+...+....|..++.+++.+.+.+.+|. +.++++++|++|+..+
T Consensus 21 ~~g-~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~ 98 (376)
T 3ezs_A 21 PKK-RGLDLGIGE-PQFETPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNF 98 (376)
T ss_dssp CSS-CCCBCSSCC-CCSCCCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHH
T ss_pred ccC-CEEEeCCCC-CCCCCCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHH
Confidence 345 789999987 5677789999998775433233333445556666666666665564 5688889999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHH----HHHHHHhcCCCCcEEEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMS----HLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~----~Le~~l~~~~~~~~lVv 257 (334)
+.++.++ ..||.|++..+.|.+....++.. +.+++.++.++.+ +|++.+.+ ++++|+
T Consensus 99 ~~~~~~~------------~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~ 159 (376)
T 3ezs_A 99 PSFVLFD------------YQNPTIAYPNPFYQIYEGAAKFI----KAKSLLMPLTKENDFTPSLNEKELQ---EVDLVI 159 (376)
T ss_dssp HHHHTTT------------CSSCEEEEEESCCTHHHHHHHHT----TCEEEEEECCGGGTSCCCCCHHHHH---HCSEEE
T ss_pred HHHHcCC------------CCCCEEEEecCCcHhHHHHHHHc----CCEEEEcccCCCCCcchhHHhhhcc---CCCEEE
Confidence 9988653 01678888888888888877766 8888888865332 56777764 578888
Q ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC---C-CCCccEEEecCcccccCCc--
Q 019931 258 TDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN---C-ERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 258 ~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~---~-~~~~Div~~SlsKa~G~~G-- 328 (334)
+++++||+|.+.| +++|+++|++||++||+||+|+...++.....+....+ . ..+.++++.||||+||+.|
T Consensus 160 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 239 (376)
T 3ezs_A 160 LNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLR 239 (376)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGC
T ss_pred EcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccce
Confidence 8899999999988 66788889999999999999997655432222221110 0 2456799999999998766
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
||++++
T Consensus 240 ~G~~~~~ 246 (376)
T 3ezs_A 240 SGFIAGD 246 (376)
T ss_dssp CEEEEEC
T ss_pred eEEEeeC
Confidence 888764
No 75
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.87 E-value=3.8e-21 Score=184.83 Aligned_cols=196 Identities=12% Similarity=0.048 Sum_probs=145.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhH----hC----CCcEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADL----KK----KEDCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~----~g----~e~alv~~sG~~An~ 179 (334)
++++||++++ +++..+|.+++++.+.- .+...+ ..+ ..+++++++++ +| .+.++++++|++|+.
T Consensus 31 ~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y--~~~----~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVAD-MEFKNPPELIEGLKKYLDETVLGY--TGP----TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSS-CSSCCCHHHHHHHHHHHHHCCCSS--BCC----CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecC-CCCCCCHHHHHHHHHHHhcCCCCC--CCC----cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 3789998886 77878999999876542 111111 111 35566666665 45 356888899999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~ 251 (334)
.++.++..+ ||.|++..+.|.+....++.. |.+++.++. .|+++|++++++ +
T Consensus 104 ~~~~~l~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~g~~~~d~~~l~~~l~~--~ 163 (399)
T 1c7n_A 104 NAVREFTKP--------------GDGVIIITPVYYPFFMAIKNQ----ERKIIECELLEKDGYYTIDFQKLEKLSKD--K 163 (399)
T ss_dssp HHHHHHCCT--------------TCEEEECSSCCTHHHHHHHTT----TCEEEECCCEEETTEEECCHHHHHHHHTC--T
T ss_pred HHHHHhcCC--------------CCEEEEcCCCcHhHHHHHHHc----CCEEEecccccCCCCEEEcHHHHHHHhcc--C
Confidence 999988754 788888888888888777665 788877764 478999999873 3
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---CCccEEEecCccccc
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---RDVDICVGTLSKAAG 325 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---~~~Div~~SlsKa~G 325 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++ |........+. .+.+|++.||||+||
T Consensus 164 ~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 241 (399)
T 1c7n_A 164 NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP--GYEHTVFQSIDEQLADKTITFTAPSKTFN 241 (399)
T ss_dssp TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHTTEEEEECSHHHHT
T ss_pred CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCcccHHHcCccccCcEEEEEeChhhcc
Confidence 6888888999999999988 999999999999999999999976543 32221122221 234689999999998
Q ss_pred CCc---cEEee
Q 019931 326 CQG---GFIAC 333 (334)
Q Consensus 326 ~~G---G~i~~ 333 (334)
+.| ||+++
T Consensus 242 ~~G~r~G~~~~ 252 (399)
T 1c7n_A 242 IAGMGMSNIII 252 (399)
T ss_dssp CGGGCCEEEEC
T ss_pred ccchheEEEEE
Confidence 655 88876
No 76
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.87 E-value=6.6e-22 Score=194.88 Aligned_cols=217 Identities=13% Similarity=0.093 Sum_probs=147.6
Q ss_pred hc-ccceeEEEeecCc---cCCCCCCHHHH-H-HHHH---h-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEE
Q 019931 104 FA-RQFKRLLLFSGND---YLGLSSHPTIA-K-AAAR---H-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLL 170 (334)
Q Consensus 104 ~~-~~g~~~l~f~sn~---yLgl~~~p~v~-~-a~~~---~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv 170 (334)
++ .+|++||||+++. .||+ .||+|+ + |+.+ . ..+...+. .+..+...+++++|+++++ .+++++
T Consensus 48 ~d~~~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~~~~~--~~~~~~~~~la~~la~~~~~~~~~~v~~ 124 (449)
T 2cjg_A 48 VDAITGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNKPSNS--DVYSVAMARFVETFARVLGDPALPHLFF 124 (449)
T ss_dssp EBTTTCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCCCCTT--TCCCHHHHHHHHHHHHHHCCTTCCEEEE
T ss_pred EECCCCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcCCCCc--ccCCHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 45 6789999998864 4666 499999 8 7765 3 23321111 2346778999999999984 567889
Q ss_pred eccHHHHHHHHHHHHhhhhhhccC---CCccCCCCCeEEEEcCCCchhhHHHHHHhhh---------cCCcEEEEeeCCC
Q 019931 171 CPTGFAANMAVIVAVGNIASLLAG---DEKSFKDEKIAIFSDALNHASIIDGIRIAER---------TKMVEVFVYKHCD 238 (334)
Q Consensus 171 ~~sG~~An~~ai~al~~~~~~~~~---~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~---------~~g~~v~~~~~~D 238 (334)
++||++||..+++++..-.. .+ ...+..+++.+|+.+..+|+.....+.+... .....++.++++|
T Consensus 125 ~~~gseA~~~aik~a~~~~~--~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 202 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKS--RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMR 202 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHH--HHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred eCchHHHHHHHHHHHHHHhc--ccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCC
Confidence 99999999999986531000 00 0000001246677777888765543332210 0012566677777
Q ss_pred --HHH-------------HHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCC
Q 019931 239 --MSH-------------LKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKN 299 (334)
Q Consensus 239 --~~~-------------Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~ 299 (334)
.+. |++++++..+++++|++++++|++|.+.| +++|+++|++||++||+||+|+ | +|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g-~g~~ 280 (449)
T 2cjg_A 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-G-CGLT 280 (449)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTT
T ss_pred chhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-C-CCcc
Confidence 443 88888643347899999999999998777 9999999999999999999999 4 6676
Q ss_pred Cccc-ccccCCCCCccEEEecCcccccCCccEEe
Q 019931 300 GGGV-AEQFNCERDVDICVGTLSKAAGCQGGFIA 332 (334)
Q Consensus 300 G~g~-~~~~~~~~~~Div~~SlsKa~G~~GG~i~ 332 (334)
|..+ .+++++.+ |++ ||||+| ..|++++
T Consensus 281 g~~~~~~~~~~~~--di~--t~sK~l-~iG~~~~ 309 (449)
T 2cjg_A 281 GTAWAYQQLDVAP--DIV--AFGKKT-QVCGVMA 309 (449)
T ss_dssp SSSSTHHHHTCCC--SEE--EECGGG-SSEEEEE
T ss_pred CcceeecccCCCc--eEE--EecCcc-cEEEEEE
Confidence 6644 35666655 554 899999 6665543
No 77
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.87 E-value=1.5e-20 Score=180.19 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=142.4
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHH-HHHHHHhHh----C----CCcEEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRL-LESCLADLK----K----KEDCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~-LE~~La~~~----g----~e~alv~~sG~~An 178 (334)
++++||+++++ ++..+|.|++++.+.-. +...+. .+ ..+ +++++++++ | .+.++++++|++|+
T Consensus 28 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~--~~----~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDM-DFATAPCIIEALNQRLMHGVFGYS--RW----KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSC-SSCCCHHHHHHHHHHHTTCCCCCC--CS----CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCC-CCCCCHHHHHHHHHHHhCCCCCCC--CC----ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 37899988874 67789999998866432 221111 11 344 666666654 5 35688889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~ 250 (334)
..++.++..+ ||.|++..+.|.+....++.. +.+++.++. .|+++|++++++
T Consensus 101 ~~~~~~l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-- 160 (390)
T 1d2f_A 101 SELIRQWSET--------------GEGVVIHTPAYDAFYKAIEGN----QRTVMPVALEKQADGWFCDMGKLEAVLAK-- 160 (390)
T ss_dssp HHHHHHSSCT--------------TCEEEEEESCCHHHHHHHHHT----TCEEEEEECEECSSSEECCHHHHHHHHTS--
T ss_pred HHHHHHhcCC--------------CCEEEEcCCCcHHHHHHHHHC----CCEEEEeecccCCCccccCHHHHHHHhcc--
Confidence 9999987654 788888888888888777766 788877764 489999999864
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCc-cEEEecCcccccC
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDV-DICVGTLSKAAGC 326 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~-Div~~SlsKa~G~ 326 (334)
.++++|++.+++||+|.+.| +++|+++|++||++||+||+|+.+.++ |........+.++. |+ +.||||+||.
T Consensus 161 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~d~-~~s~sK~~~~ 237 (390)
T 1d2f_A 161 PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG--EQPHIPWSNVARGDWAL-LTSGSKSFNI 237 (390)
T ss_dssp TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS--SSCCCCGGGTCCSSEEE-EECSHHHHTC
T ss_pred CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcCHHHcchhhHhh-ccCccHhhcc
Confidence 25788888899999999887 889999999999999999999976543 33332222333333 67 9999999986
Q ss_pred Cc---cEEee
Q 019931 327 QG---GFIAC 333 (334)
Q Consensus 327 ~G---G~i~~ 333 (334)
.| ||+++
T Consensus 238 ~G~r~G~~~~ 247 (390)
T 1d2f_A 238 PALTGAYGII 247 (390)
T ss_dssp GGGCCEEEEE
T ss_pred cChhheEEEE
Confidence 65 88875
No 78
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.87 E-value=1.9e-21 Score=190.38 Aligned_cols=183 Identities=15% Similarity=0.166 Sum_probs=140.3
Q ss_pred CHHHHHHHHHhcCCC----CccccccCchHHHHHHHHHHHhHhCCCcEEE---eccHHHHHHHHHHHHhhhhhhccCCCc
Q 019931 125 HPTIAKAAARHGMGP----RGSALICGYTNYHRLLESCLADLKKKEDCLL---CPTGFAANMAVIVAVGNIASLLAGDEK 197 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~----~~sr~~~G~~~~~~~LE~~La~~~g~e~alv---~~sG~~An~~ai~al~~~~~~~~~~~~ 197 (334)
+++|.+++.++..+. ..+...++ ...+++||+++|+++|.+.+++ |+||++||..++.+++++
T Consensus 31 ~~~vl~a~~~~~~~~~~~~~~~~~~y~-~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~--------- 100 (409)
T 3jzl_A 31 QAKVLDAFQENKVSDFHFHPSTGYGYD-DEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRP--------- 100 (409)
T ss_dssp HHHHHHHHHHTTCCGGGGCCCCTTCTT-CHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCT---------
T ss_pred HHHHHHHHHHhhhhhhccCCCcCCCCC-hhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCC---------
Confidence 467778777653321 11112222 2347899999999999999998 899999999999998765
Q ss_pred cCCCCCeEEEEcC-CCchhhHHHHH-------HhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcC----
Q 019931 198 SFKDEKIAIFSDA-LNHASIIDGIR-------IAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDS---- 260 (334)
Q Consensus 198 ~~~~~gd~Vl~d~-~~H~s~~~g~~-------ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~---- 260 (334)
||.|+++. ..|..+...+. .. ...|++++.++. .|+++|++++++ ++++|++++
T Consensus 101 -----GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l-~~~G~~~~~v~~~~~g~~d~e~l~~ai~~---~tklV~i~~s~g~ 171 (409)
T 3jzl_A 101 -----DDELLYITGQPYDTLEEIVGIRKQGQGSL-KDFHIGYSSVPLLENGDVDFPRIAKKMTP---KTKMIGIQRSRGY 171 (409)
T ss_dssp -----TCEEEECSSSCCTTHHHHHTSSSSSSSCT-GGGTCEEEECCCCTTSCCCHHHHHHHCCT---TEEEEEEECSCTT
T ss_pred -----CCEEEEeCCCCcHhHHHHHhcccchhhHH-HHcCCEEEEeCCCCCCCcCHHHHHHhccC---CCeEEEEECCCCC
Confidence 78888886 66766654331 11 122788888887 699999998864 789999999
Q ss_pred CCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
++||+|.+.|+++|+++|++ +|+++++|++|+.++++.. ....++||+++|+||++|+ .||||+++
T Consensus 172 p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~--------p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~ 243 (409)
T 3jzl_A 172 ADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQE--------PPEVGADIIAGSLIKNPGGGLAKTGGYIAGK 243 (409)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCC--------SGGGTCSEEEEETTSGGGTTTCSSCEEEEEC
T ss_pred CCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCC--------ccccCCeEEEECccccCCccCCceEEEEEeC
Confidence 99999999999999999999 9999999999997764321 1223579999999999975 47999875
No 79
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.87 E-value=1.2e-20 Score=180.77 Aligned_cols=199 Identities=14% Similarity=0.125 Sum_probs=145.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh----C----CCc-EEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK----K----KED-CLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~-alv~~sG~~An 178 (334)
++++||++++ ..+..+|.+++++.+.- .+...+....|. .++++++++++ | .++ ++++++|++|+
T Consensus 26 ~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~----~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~ 100 (389)
T 1gd9_A 26 KDVISLGIGE-PDFDTPQHIKEYAKEALDKGLTHYGPNIGL----LELREAIAEKLKKQNGIEADPKTEIMVLLGANQAF 100 (389)
T ss_dssp SSCEECCCCS-CSSCCCHHHHHHHHHHHHTTCCSCCCTTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHH
T ss_pred cCeEecCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCc----HHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHH
Confidence 4688998886 35667899999776532 222222222233 45555556555 6 357 88899999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTM 251 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~ 251 (334)
..++.+++.+ ||.|++..+.|.++...++.. |.+++.++.. |+++|++++++
T Consensus 101 ~~~~~~~~~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 159 (389)
T 1gd9_A 101 LMGLSAFLKD--------------GEEVLIPTPAFVSYAPAVILA----GGKPVEVPTYEEDEFRLNVDELKKYVTD--- 159 (389)
T ss_dssp HHHHTTTCCT--------------TCEEEEEESCCTTHHHHHHHH----TCEEEEEECCGGGTTCCCHHHHHHHCCT---
T ss_pred HHHHHHhCCC--------------CCEEEEcCCCchhHHHHHHHC----CCEEEEeccCCccCCCCCHHHHHHhcCc---
Confidence 9999887653 788888888888888887766 7888877632 78889888864
Q ss_pred CcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC-CcccccccCCCCCccEEEecCcccccCC
Q 019931 252 RKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN-GGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~-G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++.. ...+....+ ..+.|++++||||+||..
T Consensus 160 ~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~ 238 (389)
T 1gd9_A 160 KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDG-MFERTITVNGFSKTFAMT 238 (389)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT-CGGGEEEEEESTTTTTCG
T ss_pred CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccC-CCCCEEEEecChhhcCCc
Confidence 6788888999999999875 89999999999999999999998765321 122222111 134689999999999876
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 239 G~r~G~~~~~ 248 (389)
T 1gd9_A 239 GWRLGFVAAP 248 (389)
T ss_dssp GGCCEEEECC
T ss_pred ccceEEEEEC
Confidence 6 888764
No 80
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.87 E-value=9.2e-21 Score=182.41 Aligned_cols=196 Identities=16% Similarity=0.125 Sum_probs=147.4
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC----CCCccccccCc--hHHHHHHHHHHHhHhCC---CcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM----GPRGSALICGY--TNYHRLLESCLADLKKK---EDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~----g~~~sr~~~G~--~~~~~~LE~~La~~~g~---e~alv~~sG~~An 178 (334)
|+++++|.++++ + ..+|.+++++.++-. ........++. .+...+++++|+++++. +.++++++|++|+
T Consensus 26 g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~ 103 (420)
T 1t3i_A 26 GHPLVYLDNAAT-S-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAI 103 (420)
T ss_dssp TEECEECBTTTC-C-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHH
T ss_pred CCceEEecCCcc-C-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHH
Confidence 477899999886 4 568999997755321 11101122332 35678999999999998 6789999999999
Q ss_pred HHHHHHH----hhhhhhccCCCccCCCCCeEEEEcCCCchhhH----HHHHHhhhcCCcEEEEeeC-----CCHHHHHHH
Q 019931 179 MAVIVAV----GNIASLLAGDEKSFKDEKIAIFSDALNHASII----DGIRIAERTKMVEVFVYKH-----CDMSHLKTL 245 (334)
Q Consensus 179 ~~ai~al----~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~----~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~ 245 (334)
..++.++ .+ +||.|++....|.+.. ..++.. |.+++.++. .|+++|+++
T Consensus 104 ~~~~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~ 165 (420)
T 1t3i_A 104 NLVAYSWGMNNLK--------------AGDEIITTVMEHHSNLVPWQMVAAKT----GAVLKFVQLDEQESFDLEHFKTL 165 (420)
T ss_dssp HHHHHHTHHHHCC--------------TTCEEEEETTCCGGGTHHHHHHHHHH----CCEEEEECBCTTSSBCHHHHHHH
T ss_pred HHHHHHhhhcccC--------------CCCEEEECcchhHHHHHHHHHHHHhc----CcEEEEeccCCCCCcCHHHHHHh
Confidence 9999987 43 3777888888777743 233333 788888875 488999988
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
+++ ++++|++++++|++|.+.|+++|.++|++||++||+|++|+.|.... .. ..+ ++|+++.|+||.+|
T Consensus 166 l~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~~-~~~----~~di~~~s~sK~~~ 234 (420)
T 1t3i_A 166 LSE---KTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL---DV-QLI----DCDWLVASGHKMCA 234 (420)
T ss_dssp CCT---TEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---CH-HHH----TCSEEEEEGGGTTS
T ss_pred hCC---CceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC---ch-hhc----CCCEEEEehhhhcC
Confidence 864 78999999999999999999999999999999999999999764311 11 111 36899999999888
Q ss_pred CCc-cEEeeC
Q 019931 326 CQG-GFIACR 334 (334)
Q Consensus 326 ~~G-G~i~~~ 334 (334)
+.| |+++++
T Consensus 235 ~~g~G~~~~~ 244 (420)
T 1t3i_A 235 PTGIGFLYGK 244 (420)
T ss_dssp CTTCEEEEEC
T ss_pred CCceEEEEEc
Confidence 766 887764
No 81
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.87 E-value=7.5e-21 Score=183.75 Aligned_cols=198 Identities=13% Similarity=0.124 Sum_probs=146.1
Q ss_pred cceeEEEeecCccC--CCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHH
Q 019931 107 QFKRLLLFSGNDYL--GLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGF 175 (334)
Q Consensus 107 ~g~~~l~f~sn~yL--gl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~ 175 (334)
+|++++||.++++. .+..+|.+++++.+.- .+...+....|. .++++++++++ | .+.++++++|+
T Consensus 36 ~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~----~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~ 111 (406)
T 1xi9_A 36 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGL----PELRKAIVEREKRKNGVDITPDDVRVTAAVT 111 (406)
T ss_dssp TTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESHHH
T ss_pred cCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCc----HHHHHHHHHHHHHhcCCCCCHHHEEEcCChH
Confidence 45889999998764 6677899999775532 222112222233 45666666655 3 25788889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~ 248 (334)
+|+..++.+++++ ||.|++..+.|.++...++.. |.+++.++.+ |+++|++++++
T Consensus 112 ~al~~~~~~l~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 173 (406)
T 1xi9_A 112 EALQLIFGALLDP--------------GDEILVPGPSYPPYTGLVKFY----GGKPVEYRTIEEEDWQPDIDDIRKKITD 173 (406)
T ss_dssp HHHHHHHHHHCCT--------------TCEEEEEESCCHHHHHHHHHT----TCEEEEEEEEGGGTSEECHHHHHHHCCT
T ss_pred HHHHHHHHHhCCC--------------CCEEEEcCCCCccHHHHHHHc----CCEEEEeecCCCcCCcCCHHHHHHhhCc
Confidence 9999999988654 788888888888888777766 7887777642 78899988864
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCc-cEEEecCcccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDV-DICVGTLSKAA 324 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~-Div~~SlsKa~ 324 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++.... ....++ ++. ||+++||||++
T Consensus 174 ---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~-~~~~~~--~~~~~i~~~s~sK~~ 247 (406)
T 1xi9_A 174 ---RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLT--KDVPVIVMNGLSKVY 247 (406)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHC--SSSCEEEEEESTTTT
T ss_pred ---CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC-CHHHcC--CCceEEEEecccccc
Confidence 6888888999999999876 8999999999999999999999866532111 122232 456 89999999999
Q ss_pred cCCc---cEEe
Q 019931 325 GCQG---GFIA 332 (334)
Q Consensus 325 G~~G---G~i~ 332 (334)
|+.| |+++
T Consensus 248 ~~~G~r~G~~~ 258 (406)
T 1xi9_A 248 FATGWRLGYMY 258 (406)
T ss_dssp CCGGGCCEEEE
T ss_pred CCCccEEEEEE
Confidence 8655 7876
No 82
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.87 E-value=3.6e-21 Score=184.21 Aligned_cols=200 Identities=15% Similarity=0.102 Sum_probs=145.4
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcC---C-CC--ccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGM---G-PR--GSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g-~~--~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~An 178 (334)
|+++++|..+.. + ..+|.+++++.++-. + .. .+...++..+...+++++|+++++. +.++++++|++|+
T Consensus 21 g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~ 98 (406)
T 1kmj_A 21 GLPLAYLDSAAS-A-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGI 98 (406)
T ss_dssp TEECEECCTTTC-C-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHH
T ss_pred CCceEEecCCcc-C-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHH
Confidence 456666666553 3 468899997765421 1 11 1111122356678999999999997 5678889999999
Q ss_pred HHHHHHH----hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcC
Q 019931 179 MAVIVAV----GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCC 249 (334)
Q Consensus 179 ~~ai~al----~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~ 249 (334)
..++.++ .+ ++|.|++....|.+....+.......|.+++.++.+ |+++|++++++
T Consensus 99 ~~~~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~- 163 (406)
T 1kmj_A 99 NLVANSWGNSNVR--------------AGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE- 163 (406)
T ss_dssp HHHHHHTHHHHCC--------------TTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-
T ss_pred HHHHHHhhhhcCC--------------CCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-
Confidence 9999987 43 378888888888775544221111117888888753 78999998864
Q ss_pred CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 250 TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
++++|++++++|++|.+.|+++|.++|++||++||+|++|+.|... ..+ .. .++|+++.|+||.+|+.|
T Consensus 164 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~---~~~-~~----~~~d~~~~s~~K~~g~~G~ 233 (406)
T 1kmj_A 164 --KTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHP---VDV-QA----LDCDFYVFSGHKLYGPTGI 233 (406)
T ss_dssp --TEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSC---CCH-HH----HTCSEEEEEGGGTTSCTTC
T ss_pred --CCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCC---Ccc-cc----cCCCEEEEEchhccCCCCc
Confidence 6899999999999999999999999999999999999999875321 111 11 146899999999999887
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
|+++++
T Consensus 234 G~~~~~ 239 (406)
T 1kmj_A 234 GILYVK 239 (406)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 888764
No 83
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.87 E-value=4.8e-21 Score=184.49 Aligned_cols=200 Identities=13% Similarity=0.068 Sum_probs=145.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCC--CccccccCchHHHHHHHHHHHhHhC--------C-CcEEEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGP--RGSALICGYTNYHRLLESCLADLKK--------K-EDCLLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~--~~sr~~~G~~~~~~~LE~~La~~~g--------~-e~alv~~sG~~A 177 (334)
.++|||++++ ..+..+|.|++++++.-... .++....|. .+++++++++++ . +.++++++|++|
T Consensus 23 ~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~----~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a 97 (410)
T 3e2y_A 23 PSVVNLGQGF-PDISPPSYVKEELSKAAFIDNMNQYTRGFGH----PALVKALSCLYGKIYQRQIDPNEEILVAVGAYGS 97 (410)
T ss_dssp TTSEECSSCC-CCSCCCHHHHHHHHHHHTCGGGGSCCCTTCC----HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred CCeEEecCCC-CCCCCCHHHHHHHHHHHhCccccCCCCCCCh----HHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 5689999987 68888999999887653211 122222233 455566666544 2 578888999999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----------------CHHH
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----------------DMSH 241 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----------------D~~~ 241 (334)
+..++.+++++ +|.|++..+.|..+...+... +.+++.++.+ |+++
T Consensus 98 ~~~~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 98 LFNSIQGLVDP--------------GDEVIIMVPFYDCYEPMVRMA----GAVPVFIPLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp HHHHHHHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECEECCCCSSCCBGGGEECCHHH
T ss_pred HHHHHHHhcCC--------------CCEEEEeCCCchhhHHHHHHc----CCEEEEEeccccccccccccccCCcCCHHH
Confidence 99999988764 777888888888887777766 7887777653 7888
Q ss_pred HHHHHhcCCCCcEEEEEcCCCCCCCCcc---CHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEe
Q 019931 242 LKTLLSCCTMRKKVVVTDSLFSMDGDFA---PMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVG 318 (334)
Q Consensus 242 Le~~l~~~~~~~~lVv~e~v~n~~G~~~---pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~ 318 (334)
|++++++ ++++|++++++||+|.+. ++++|+++|++||++||+||+|+...++.........+....+.+|++.
T Consensus 160 l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (410)
T 3e2y_A 160 LESKFSS---KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIG 236 (410)
T ss_dssp HHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEE
T ss_pred HHhhcCC---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEe
Confidence 8887753 789999999999999985 5899999999999999999999975553211111222222234568999
Q ss_pred cCcccccCCc---cEEeeC
Q 019931 319 TLSKAAGCQG---GFIACR 334 (334)
Q Consensus 319 SlsKa~G~~G---G~i~~~ 334 (334)
||||+||+.| ||++++
T Consensus 237 S~sK~~g~~G~r~G~~~~~ 255 (410)
T 3e2y_A 237 SAGKTFSVTGWKLGWSIGP 255 (410)
T ss_dssp EHHHHSSCGGGCCEEEECC
T ss_pred cchhhcCCCCceEEEEEEC
Confidence 9999998766 888764
No 84
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.87 E-value=1.2e-20 Score=182.76 Aligned_cols=201 Identities=14% Similarity=0.131 Sum_probs=144.3
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcC-C-CCccccccCchHHHHHHHHHHHhHh----CC-----CcEEEeccHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGM-G-PRGSALICGYTNYHRLLESCLADLK----KK-----EDCLLCPTGF 175 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g-~~~sr~~~G~~~~~~~LE~~La~~~----g~-----e~alv~~sG~ 175 (334)
+|+++|||++++ ..+..+|.+++++.+.-. + ..++....| ..+|++++++++ |. +.++++++|+
T Consensus 35 ~g~~~idl~~g~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~ 109 (412)
T 2x5d_A 35 RGEDIIDLSMGN-PDGPTPPHIVEKLCTVAQREDTHGYSTSRG----IPRLRRAISHWYRDRYDVQIDPESEAIVTIGSK 109 (412)
T ss_dssp TTCCCEECSSCC-CCSCCCHHHHHHHHHTC---------CTTC----CHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHH
T ss_pred cCCCEEecCCCC-CCCCCCHHHHHHHHHHHhCCCCCCCCCCCC----cHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChH
Confidence 458899999987 466679999998876432 1 111211222 356677777766 73 4788999999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~ 248 (334)
+|+..++.+++.+ ||.|++..+.|.++...++.. |.+++.++.+ |+++|+++++
T Consensus 110 ~a~~~~~~~~~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~i~- 170 (412)
T 2x5d_A 110 EGLAHLMLATLDH--------------GDTILVPNPSYPIHIYGAVIA----GAQVRSVPLVPGIDFFNELERAIRESI- 170 (412)
T ss_dssp HHHHHHHHHHCCT--------------TCEEEEEESCCHHHHHHHHHH----TCEEEEEECSTTSCHHHHHHHHHHTEE-
T ss_pred HHHHHHHHHhCCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEeecCCccCCCCCHHHHHHhcc-
Confidence 9999999988654 788888888888888777766 7888888764 3456666654
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccc-cCCCcccccccCCCCCccEEEecCcccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVC-GKNGGGVAEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~SlsKa~ 324 (334)
+++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.+ |.....+.. +.-..+.+++++||||+|
T Consensus 171 --~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~s~sK~~ 247 (412)
T 2x5d_A 171 --PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQ-VPGAKDIAVEFFTLSKSY 247 (412)
T ss_dssp --SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG-STTGGGTEEEEEECC-CC
T ss_pred --cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhh-ccCccCcEEEEecCcccc
Confidence 36788888899999999877 68899999999999999999998765 222222322 111135689999999999
Q ss_pred cCCc---cEEeeC
Q 019931 325 GCQG---GFIACR 334 (334)
Q Consensus 325 G~~G---G~i~~~ 334 (334)
|+.| ||++++
T Consensus 248 ~~~G~r~G~~~~~ 260 (412)
T 2x5d_A 248 NMAGWRIGFMVGN 260 (412)
T ss_dssp SCTTSCCEEEEEC
T ss_pred CCcccceEEEEcC
Confidence 8766 888764
No 85
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.86 E-value=4.2e-21 Score=185.81 Aligned_cols=204 Identities=12% Similarity=0.073 Sum_probs=148.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCC--CccccccCchHHHHHHHHHHHhHhCC-----CcEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGP--RGSALICGYTNYHRLLESCLADLKKK-----EDCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~--~~sr~~~G~~~~~~~LE~~La~~~g~-----e~alv~~sG~~An~~ 180 (334)
..+|||+.++ .++..+|.+++++.+.- .+. ..+....|..++.+++.+.+.+.+|. +.++++++|++|+..
T Consensus 28 ~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~ 106 (422)
T 3fvs_A 28 HDVVNLGQGF-PDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFT 106 (422)
T ss_dssp SCCEECCCSS-CSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHH
T ss_pred CCceEeCCCC-CCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHH
Confidence 5789999987 67888999999876542 221 12222334445555555555555553 468888999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----------------CHHHHH
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----------------DMSHLK 243 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----------------D~~~Le 243 (334)
++.+++++ +|.|++..+.|..+...+... +.+++.++.+ |+++|+
T Consensus 107 ~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~ 168 (422)
T 3fvs_A 107 AFQALVDE--------------GDEVIIIEPFFDCYEPMTMMA----GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELA 168 (422)
T ss_dssp HHHHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHH
T ss_pred HHHHHcCC--------------CCEEEEcCCCchhhHHHHHHc----CCEEEEEecccccccccccccccCCCCCHHHHH
Confidence 99988764 777887777887877777766 7888777643 778888
Q ss_pred HHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC
Q 019931 244 TLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL 320 (334)
Q Consensus 244 ~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl 320 (334)
+++++ ++++|++++++||+|.+.| +++|+++|++||++||+||+|+..+++.........+....+.+|++.||
T Consensus 169 ~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 245 (422)
T 3fvs_A 169 GKFTS---RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSA 245 (422)
T ss_dssp TTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEH
T ss_pred hhcCC---CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecc
Confidence 77753 7899999999999999984 89999999999999999999997655322111111222222456899999
Q ss_pred cccccCCc---cEEeeC
Q 019931 321 SKAAGCQG---GFIACR 334 (334)
Q Consensus 321 sKa~G~~G---G~i~~~ 334 (334)
||+||+.| ||++++
T Consensus 246 sK~~g~~G~r~G~~~~~ 262 (422)
T 3fvs_A 246 GKTFSATGWKVGWVLGP 262 (422)
T ss_dssp HHHHTCGGGCCEEEECC
T ss_pred hhccCCccceEEEEEeC
Confidence 99998766 888764
No 86
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.86 E-value=4.5e-21 Score=188.68 Aligned_cols=185 Identities=15% Similarity=0.133 Sum_probs=141.3
Q ss_pred CHHHHHHHHHhcCCC----CccccccCchHHHHHHHHHHHhHhCCCcEEE---eccHHHHHHHHHHHHhhhhhhccCCCc
Q 019931 125 HPTIAKAAARHGMGP----RGSALICGYTNYHRLLESCLADLKKKEDCLL---CPTGFAANMAVIVAVGNIASLLAGDEK 197 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~----~~sr~~~G~~~~~~~LE~~La~~~g~e~alv---~~sG~~An~~ai~al~~~~~~~~~~~~ 197 (334)
.++|.+|+.++..+. ..+.+.++ ...+++||+++|+++|.+.+++ |+||++||..++.+++++
T Consensus 45 ~~~Vl~A~~~~~~~~~~~~~~~gy~y~-~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~p--------- 114 (427)
T 3i16_A 45 QLKVLNAFQEERISEAHFTNSSGYGYG-DIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRP--------- 114 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCTT-CHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCT---------
T ss_pred HHHHHHHHHHhchhHHhcCCCCCCCCC-HHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCC---------
Confidence 478888887643221 11112222 2347899999999999999999 899999999999998875
Q ss_pred cCCCCCeEEEEcC-CCchhhHHHH--------HHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcC---
Q 019931 198 SFKDEKIAIFSDA-LNHASIIDGI--------RIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDS--- 260 (334)
Q Consensus 198 ~~~~~gd~Vl~d~-~~H~s~~~g~--------~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~--- 260 (334)
||.|+++. ..|......+ ... ...|.+++.++. .|+++|++++++. +++++|++++
T Consensus 115 -----GD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l-~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~ 187 (427)
T 3i16_A 115 -----GNTMLSVCGEPYDTLHDVIGITENSNMGSL-KEFGINYKQVDLKEDGKPNLEEIEKVLKED-ESITLVHIQRSTG 187 (427)
T ss_dssp -----TCEEEESSSSCCGGGHHHHTCSCCCSSCCT-GGGTCEEEECCCCTTSSCCHHHHHHHHHTC-TTEEEEEEECSCC
T ss_pred -----CCEEEEeCCCccHHHHHHHhccccchHHHH-HHcCCEEEEecCccCCCcCHHHHHHHhhCC-CCCEEEEEEcCCC
Confidence 78888887 6666554332 111 122788888887 5999999999732 2789999999
Q ss_pred -CCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEee
Q 019931 261 -LFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 261 -v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
++||+|.+.|+++|+++|++ +|+++++|++|+.+++... +...++||+++|+||++|+ .||||++
T Consensus 188 ~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~--------p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~ 259 (427)
T 3i16_A 188 YGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKE--------PTDVGADLIAGSLIKNIGGGIAPTGGYLAG 259 (427)
T ss_dssp SSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSC--------GGGGTCSEEEEETTSGGGTTTCCSCEEEEE
T ss_pred CCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCC--------ccccCCeEEEecCcccCCCCCCceEEEEEE
Confidence 99999999999999999999 9999999999998764321 1223579999999999985 6899987
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 260 ~ 260 (427)
T 3i16_A 260 T 260 (427)
T ss_dssp C
T ss_pred C
Confidence 5
No 87
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.86 E-value=1.3e-20 Score=183.10 Aligned_cols=202 Identities=13% Similarity=0.052 Sum_probs=145.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCC----CCccccccCchHHHHHHHHHHHhHhC----CC-cEEEeccHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMG----PRGSALICGYTNYHRLLESCLADLKK----KE-DCLLCPTGFAANM 179 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g----~~~sr~~~G~~~~~~~LE~~La~~~g----~e-~alv~~sG~~An~ 179 (334)
.++|||.++++ .+..+|.+++++.+.-.. ...+....|...+.+++.+.+.+++| .+ .++++++|++|+.
T Consensus 37 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~ 115 (429)
T 1yiz_A 37 YKPLNLGQGFP-DYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALY 115 (429)
T ss_dssp HCCEECCSSSC-SSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred CCEEEecCCCC-CCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHH
Confidence 56899998864 566789999988664321 11222223343444444444444446 24 7888899999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---------------CCHHHHHH
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---------------CDMSHLKT 244 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---------------~D~~~Le~ 244 (334)
.++++++.+ ||.|++..+.|......++.. |.+++.++. .|+++|++
T Consensus 116 ~~~~~~~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 177 (429)
T 1yiz_A 116 ATIQGHVDE--------------GDEVIIIEPFFDCYEPMVKAA----GGIPRFIPLKPNKTGGTISSADWVLDNNELEA 177 (429)
T ss_dssp HHHHHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHH
T ss_pred HHHHHhcCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEEeCCcccccccccccCcccCHHHHHH
Confidence 999988654 677887777777777777665 777777763 47888888
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEec
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGT 319 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~S 319 (334)
++++ ++++|++++++||+|.+.| +++|+++|++||++||+||+|+...++ |.+......+ ..+.|+++.|
T Consensus 178 ~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~s 252 (429)
T 1yiz_A 178 LFNE---KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFE--PFEHIRICTLPGMWERTITIGS 252 (429)
T ss_dssp HCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCT--TSCCCCGGGSTTTGGGEEEEEE
T ss_pred Hhcc---CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccC--CCCCcChhhccCCcCceEEEec
Confidence 8853 7888988999999999886 899999999999999999999975553 3222111122 2456899999
Q ss_pred CcccccCCc---cEEeeC
Q 019931 320 LSKAAGCQG---GFIACR 334 (334)
Q Consensus 320 lsKa~G~~G---G~i~~~ 334 (334)
|||+||+.| |+++++
T Consensus 253 ~sK~~~~~G~r~G~~~~~ 270 (429)
T 1yiz_A 253 AGKTFSLTGWKIGWAYGP 270 (429)
T ss_dssp HHHHHTCGGGCCEEEESC
T ss_pred chhccCCCCcceEEEEeC
Confidence 999998766 888764
No 88
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.86 E-value=4.1e-21 Score=182.44 Aligned_cols=198 Identities=17% Similarity=0.109 Sum_probs=150.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~al~ 186 (334)
+++|||++|+. .+..+|.+++++.+.-.....+... . ..+|++++++++|. +.++++++|++|+..++.+++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~y~~~----~-~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~ 103 (365)
T 3get_A 30 KEVIKLASNEN-PFGTPPKAIECLRQNANKAHLYPDD----S-MIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL 103 (365)
T ss_dssp SCCEECSSCCC-TTCSCHHHHHHHHHHGGGTTSCCCT----T-CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHC
T ss_pred CceEEecCCCC-CCCCCHHHHHHHHHHHHhhccCCCC----C-hHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHh
Confidence 68999999863 3567999999887654322222111 1 26899999999994 578899999999999999887
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ ||.|++..+.|.++...++.. |.+++.++. .|+++|+++++ +++++|+++++
T Consensus 104 ~~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p 162 (365)
T 3get_A 104 NS--------------KNAFLQAGVTFAMYEIYAKQC----GAKCYKTQSITHNLDEFKKLYETHK---DEIKLIFLCLP 162 (365)
T ss_dssp CT--------------TCEEEECSSCCTHHHHHHHHH----TCEEEECSSSSCCHHHHHHHHHHTT---TTEEEEEEESS
T ss_pred CC--------------CCEEEEeCCChHHHHHHHHHc----CCEEEEEecCCCCCCCHHHHHHHhC---CCCCEEEEcCC
Confidence 64 788999999999888888777 889998886 46677777776 37899999999
Q ss_pred CCCCCCccCHHHHHHHHH--HcCCEEEEecCcccccc--c-CCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 262 FSMDGDFAPMVELVKLRR--KYGFLLVLDDAHGTFVC--G-KNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~--k~ga~LivDeAh~~Gv~--G-~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
+||+|.+.|+++|.++++ ++|+++|+||+|+.+.+ . ....+.....+ ..+.+++++||||++|..| ||+++
T Consensus 163 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~ 241 (365)
T 3get_A 163 NNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIK-EFDNVLYLGTFSKLYGLGGLRIGYGIA 241 (365)
T ss_dssp CTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHH-HCTTEEEEEESSSTTSCTTTCCEEEEE
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhc-cCCCEEEEeecchHhcCcchheEEEEc
Confidence 999999999999888888 77999999999997653 2 11122222111 1245689999999998766 88876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 242 ~ 242 (365)
T 3get_A 242 N 242 (365)
T ss_dssp C
T ss_pred C
Confidence 3
No 89
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.86 E-value=8.9e-21 Score=181.63 Aligned_cols=202 Identities=15% Similarity=0.114 Sum_probs=145.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVI 182 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai 182 (334)
..++||+++++ .+..+|.+++++.+.- .+...+....|...+.+++.+.+.+++|. + .++++++|++|+..++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~ 108 (386)
T 1u08_A 30 HQAINLSQGFP-DFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAI 108 (386)
T ss_dssp TTCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHH
T ss_pred CCeEEecCCCC-CCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHH
Confidence 45889999875 6667899999776542 22222222234434444444444443462 4 7888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lV 256 (334)
.+++.+ ||.|++..+.|.++...++.. |.+++.++. .|+++|++++++ ++++|
T Consensus 109 ~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~---~~~~v 167 (386)
T 1u08_A 109 TALVRN--------------GDEVICFDPSYDSYAPAIALS----GGIVKRMALQPPHFRVDWQEFAALLSE---RTRLV 167 (386)
T ss_dssp HHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECCTTTCCCCHHHHHHHCCT---TEEEE
T ss_pred HHhCCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEeecCcccCcCCHHHHHHhhcc---cCEEE
Confidence 988654 777888878888887777666 788888775 378999988853 68899
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEecCcccccCCc---
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGTLSKAAGCQG--- 328 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~SlsKa~G~~G--- 328 (334)
++++++||+|.+.| +++|+++|++||+++|+||+|+...++ |.+......+ ..+.|++++||||+||+.|
T Consensus 168 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 245 (386)
T 1u08_A 168 ILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFS--QQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKV 245 (386)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCC--SSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCC
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccC--CCCCcChhcccCccCcEEEEecchhhcCCcccce
Confidence 89999999999886 688999999999999999999976553 2222111122 2356899999999998666
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
||++++
T Consensus 246 G~~~~~ 251 (386)
T 1u08_A 246 GYCVAP 251 (386)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 888764
No 90
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.86 E-value=6.3e-21 Score=184.47 Aligned_cols=206 Identities=15% Similarity=0.111 Sum_probs=151.0
Q ss_pred ceeEEEeecCccCCCC----CCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLS----SHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANM 179 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~----~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~ 179 (334)
|+++|||++++|++.. .+|.+++++.++.. +..++....|..++++++++.+....+.+ .++++++|++|+.
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~ 115 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIR 115 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHH
Confidence 4789999999997654 45788888776432 22334445677777777777776666666 7889999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcC-CCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCC-TMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~-~~~ 252 (334)
.++.+++++ ||.|++..+.|..+...++.. |.+++.++. .|+++|++++++. .++
T Consensus 116 ~~~~~~~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 177 (413)
T 3t18_A 116 SAIFSYLDE--------------GDPLICHDYYWAPYRKICEEF----GRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDS 177 (413)
T ss_dssp HHHHHHCCS--------------SCEEEEESSCCTHHHHHHHHH----TCEEEEECCBCTTSSBCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCC--------------CCEEEECCCCcccHHHHHHHh----CCeEEEeeccCCCCCcCHHHHHHHHHHHhhcC
Confidence 999988764 788998888998888888777 888888874 3899999998742 013
Q ss_pred cE-EEEEcCC-CCCCCCccCHHHH---HHHHH------HcCCEEEEecCcccccccCCCc---cccccc-CCCCCc-cEE
Q 019931 253 KK-VVVTDSL-FSMDGDFAPMVEL---VKLRR------KYGFLLVLDDAHGTFVCGKNGG---GVAEQF-NCERDV-DIC 316 (334)
Q Consensus 253 ~~-lVv~e~v-~n~~G~~~pL~~L---~ela~------k~ga~LivDeAh~~Gv~G~~G~---g~~~~~-~~~~~~-Div 316 (334)
++ +|+++++ +||+|.+.|.+++ +++|+ +||++||+||+|... +.+|. .+...+ ++.++. .|+
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~--~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEF--AGDGDQQRKFFEKFSNLPRNLFVVV 255 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGG--SSSSSTTTGGGGGGTTCCTTEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccc--cCChhhHHHHHHHHhhcCCCeeEEE
Confidence 44 8889988 8999999996655 55555 899999999999753 33332 222222 222222 278
Q ss_pred EecCcccccCCc---cEEee
Q 019931 317 VGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 317 ~~SlsKa~G~~G---G~i~~ 333 (334)
++||||+||+.| ||+++
T Consensus 256 ~~S~sK~~~~~G~riG~~~~ 275 (413)
T 3t18_A 256 AFSMSKSHTAYGLRSGAAVG 275 (413)
T ss_dssp EEEHHHHTTCGGGCCEEEEE
T ss_pred EEecCccCCCcCcCcEEEEE
Confidence 899999999877 88876
No 91
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.86 E-value=4.9e-21 Score=188.40 Aligned_cols=184 Identities=20% Similarity=0.198 Sum_probs=140.0
Q ss_pred HHHHHHHHHhcCCCC----ccccccCchHHHHHHHHHHHhHhCCCcEEE---eccHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 126 PTIAKAAARHGMGPR----GSALICGYTNYHRLLESCLADLKKKEDCLL---CPTGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 126 p~v~~a~~~~g~g~~----~sr~~~G~~~~~~~LE~~La~~~g~e~alv---~~sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
++|.+++.+...+.. ...+.++ ...+++||+++++++|.+.+++ ++||++||..++.+++++
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~-~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~p---------- 115 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYN-DIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRP---------- 115 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTT-CHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCT----------
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCC-chhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCC----------
Confidence 788888776432210 1111222 2347899999999999999999 899999999999998875
Q ss_pred CCCCCeEEEEcC-CCchhhHHHH--------HHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCcEEEEEcC----C
Q 019931 199 FKDEKIAIFSDA-LNHASIIDGI--------RIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRKKVVVTDS----L 261 (334)
Q Consensus 199 ~~~~gd~Vl~d~-~~H~s~~~g~--------~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~~lVv~e~----v 261 (334)
||.|+++. ..|......+ ... ...|++++.++. .|+++|++++++. +++++|++++ +
T Consensus 116 ----GD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l-~~~G~~~~~v~~~~~~~d~e~l~~~i~~~-~~tklV~i~~s~gyp 189 (427)
T 3hvy_A 116 ----NDTMMSICGMPYDTLHDIIGMDDSKKVGSL-REYGVKYKMVDLKDGKVDINTVKEELKKD-DSIKLIHIQRSTGYG 189 (427)
T ss_dssp ----TCEEEECSSSCCGGGHHHHTCCTTCCSCCT-GGGTCEEEECCCBTTBCCHHHHHHHHHHC-TTEEEEEEESSCCSS
T ss_pred ----CCEEEEeCCCCchhHHHHhccccchhhhHH-HHcCCEEEEecCCCCCcCHHHHHHHhhCC-CCCEEEEEECCCCCC
Confidence 78888876 6665544222 111 112788888887 7999999999732 2789999999 9
Q ss_pred CCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
+||+|.+.|+++|+++|++ +|++||+|++|+.++++.. ++..++||+++|+||++|+ .||+|+++
T Consensus 190 ~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~--------p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~ 260 (427)
T 3hvy_A 190 WRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE--------PTDVGADIIAGSLIKNIGGGIATTGGYIAGK 260 (427)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC--------GGGGTCSEEEEETTSGGGTTTCCSCEEEEEC
T ss_pred CCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCC--------CcccCCeEEEECCcccccccccceEEEEEEC
Confidence 9999999999999999999 8999999999998764321 1223579999999999985 68999875
No 92
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.6e-20 Score=181.79 Aligned_cols=201 Identities=12% Similarity=0.082 Sum_probs=144.6
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCC----C-cEEEeccHHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKK----E-DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e-~alv~~sG~~An~~ai~ 183 (334)
.+|||++++. .+..+|.+++++.+.- .+...+....|...+.+++.+.+.+.+|. + .++++++|++|+..++.
T Consensus 26 ~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~ 104 (411)
T 2o0r_A 26 GAVNLGQGFP-DEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVL 104 (411)
T ss_dssp TCEESSCSSC-SSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHH
T ss_pred CeeeccCcCC-CCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHH
Confidence 4789988863 6667899999876542 22222222333334444444444443462 4 78888999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHHHhcCCCCcEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~l~~~~~~~~l 255 (334)
++.++ ||.|++..+.|.++...++.. |.+++.++. .|+++|++++++ ++++
T Consensus 105 ~~~~~--------------gd~Vl~~~~~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~d~~~l~~~l~~---~~~~ 163 (411)
T 2o0r_A 105 GLVEP--------------GSEVLLIEPFYDSYSPVVAMA----GAHRVTVPLVPDGRGFALDADALRRAVTP---RTRA 163 (411)
T ss_dssp HHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEECEEETTEEECCHHHHHHHCCT---TEEE
T ss_pred HhcCC--------------CCEEEEeCCCcHhHHHHHHHc----CCEEEEeeccccccCCCCCHHHHHHhhcc---CceE
Confidence 88654 788888888888887777666 788777764 488999998863 6889
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC--CCCccEEEecCcccccCCc--
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC--ERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~--~~~~Div~~SlsKa~G~~G-- 328 (334)
|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++ |.+......+ ..+.|+++.||||+||+.|
T Consensus 164 v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 241 (411)
T 2o0r_A 164 LIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFD--HARHLPLAGFDGMAERTITISSAAKMFNCTGWK 241 (411)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTC
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcChhhccCCCCCEEEEeechhhcCCccce
Confidence 999999999999877 589999999999999999999976553 3221111112 2356899999999998666
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
|+++++
T Consensus 242 ~G~~~~~ 248 (411)
T 2o0r_A 242 IGWACGP 248 (411)
T ss_dssp EEEEECC
T ss_pred EEEEeeC
Confidence 888764
No 93
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.86 E-value=1.1e-20 Score=182.83 Aligned_cols=198 Identities=15% Similarity=0.173 Sum_probs=150.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC--CC---C---ccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM--GP---R---GSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~---~---~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An 178 (334)
.-|+|+.++. ..+|.+++++.++-. .. . .+....+..+...+++++++++++.+ .++++++|++|+
T Consensus 23 ~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~ 98 (423)
T 3lvm_A 23 PIYLDYSATT----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESD 98 (423)
T ss_dssp SEECBTTTCC----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHH
T ss_pred CEeecCCCcC----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHH
Confidence 4566665542 358999998876533 11 1 12222334567789999999999976 789999999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCc
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~ 253 (334)
..++.++... ..+++|.|++....|.++...+.... ..+++++.++.+ |+++|++++++ ++
T Consensus 99 ~~a~~~l~~~----------~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~ 164 (423)
T 3lvm_A 99 NLAIKGAANF----------YQKKGKHIITSKTEHKAVLDTCRQLE-REGFEVTYLAPQRNGIIDLKELEAAMRD---DT 164 (423)
T ss_dssp HHHHHHHHHH----------HTTTCCEEEEETTSCHHHHHHHHHHH-HTTCEEEEECCCTTSCCCHHHHHHHCCT---TE
T ss_pred HHHHHHHHHh----------hccCCCEEEECCccchHHHHHHHHHH-HcCCEEEEeccCCCCccCHHHHHHhcCC---Cc
Confidence 9999988751 01137889999999998877765432 227888888765 89999998864 78
Q ss_pred EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccccCCc-cEE
Q 019931 254 KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G~~G-G~i 331 (334)
++|++++++|++|.+.|+++|+++|++||++||+||+|+.+.+. +.+ ..++|+++.|+||.+|+.| |++
T Consensus 165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~g~G~~ 235 (423)
T 3lvm_A 165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP---------IDLSQLKVDLMSFSGHKIYGPKGIGAL 235 (423)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTSCCSEEEEESTTTTSCSSCEEE
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------cChhhcCCCEEEechHHhcCCCCeEEE
Confidence 99999999999999999999999999999999999999875431 111 1246899999999988765 776
Q ss_pred ee
Q 019931 332 AC 333 (334)
Q Consensus 332 ~~ 333 (334)
++
T Consensus 236 ~~ 237 (423)
T 3lvm_A 236 YV 237 (423)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 94
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.86 E-value=1.1e-20 Score=184.75 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...++|++|++++|.+.+++++||++|+..++.+++++ +|.|++....|.+....+.......|
T Consensus 57 ~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~~~--------------gd~vi~~~~~~~~~~~~~~~~~~~~g 122 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQA--------------GDNIVSTPNLYGGTFNQFKVTLKRLG 122 (421)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEECSCCCHHHHHHHHTHHHHTT
T ss_pred ChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHhCC--------------CCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 4778999999999999999999999999999999987654 78888888888887776631111228
Q ss_pred cEEEEe-eCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCc-ccccccCCCcccccc
Q 019931 229 VEVFVY-KHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAH-GTFVCGKNGGGVAEQ 306 (334)
Q Consensus 229 ~~v~~~-~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh-~~Gv~G~~G~g~~~~ 306 (334)
++++.+ +.+|+++|++++++ ++++|++++++|++|.+.|+++|.++|++||++||+|++| ++|.. +..+
T Consensus 123 ~~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~---~~~~--- 193 (421)
T 2ctz_A 123 IEVRFTSREERPEEFLALTDE---KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL---LRPL--- 193 (421)
T ss_dssp CEEEECCTTCCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS---CCGG---
T ss_pred CEEEEECCCCCHHHHHHhhcc---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc---CCcc---
Confidence 899999 88899999999874 7899999999999999999999999999999999999999 76632 2221
Q ss_pred cCCCCCccEEEecCcccccC----CccEEee
Q 019931 307 FNCERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 307 ~~~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+ .++|+++.|++|.+|+ .||++++
T Consensus 194 -~--~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 194 -A--WGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp -G--GTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred -c--cCCeEEEECCcccccCCCCcEEEEEEe
Confidence 1 2468999999999986 4566664
No 95
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.86 E-value=1.1e-20 Score=183.06 Aligned_cols=160 Identities=13% Similarity=0.087 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..++||++|++++|.+++++++||++|+..++.+++++ ||.|++....|.+....+.......+
T Consensus 65 ~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~~~--------------gd~Vi~~~~~y~~~~~~~~~~~~~~g 130 (392)
T 3qhx_A 65 NPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAMLRP--------------GDHVVIPDDAYGGTFRLIDKVFTGWN 130 (392)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEETTCCHHHHHHHHHTGGGGT
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC--------------CCEEEEeCCCcchHHHHHHHHHHhcC
Confidence 4777999999999999999999999999999999988654 77888888888776665532222238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.+++.++.+|+++|++++++ ++++|++++++|++|.+.|+++|+++|++||++||+|++|+.++... ..
T Consensus 131 ~~~~~v~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~-------~~- 199 (392)
T 3qhx_A 131 VEYTPVALADLDAVRAAIRP---TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ-------PL- 199 (392)
T ss_dssp CEEEEECTTCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-------GG-
T ss_pred cEEEEeCCCCHHHHHHhhCC---CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC-------hH-
Confidence 89999999999999999874 78999999999999999999999999999999999999998764321 11
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
..++||++.|++|.+|+. ||+++++
T Consensus 200 -~~~~di~~~S~sK~lg~~g~~~~G~v~~~ 228 (392)
T 3qhx_A 200 -SLGADVVLHSTTKYIGGHSDVVGGALVTN 228 (392)
T ss_dssp -GGTCSEEEEETTTTTTCSSCCCCEEEEES
T ss_pred -HhCCcEEEEcCccccCCCCCceEEEEEEC
Confidence 234689999999999864 6887753
No 96
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.86 E-value=2.8e-20 Score=176.92 Aligned_cols=207 Identities=16% Similarity=0.112 Sum_probs=152.0
Q ss_pred EeecCccCCCC---CCHHHHHHHHHhcCC-CCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 113 LFSGNDYLGLS---SHPTIAKAAARHGMG-PRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 113 ~f~sn~yLgl~---~~p~v~~a~~~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
++.+++|+|.. .+|.+++++.++-.. ...+....+.....+++++++++++|.+ .++++++|++|+..++.++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~ 107 (397)
T 3f9t_A 28 KYEDGNIFGSMCSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIK 107 (397)
T ss_dssp CGGGTCBCSCSCCCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEecCCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHH
Confidence 34566777777 368899988775432 2222222355677789999999999875 45888999999999999887
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
.+..-. .......+++|.|++....|.++...++.. |.+++.++.+ |+++|++++++. ++++|+++++
T Consensus 108 ~~~~~~-~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~ 180 (397)
T 3f9t_A 108 NIWREK-RRKGLSKNEHPKIIVPITAHFSFEKGREMM----DLEYIYAPIKEDYTIDEKFVKDAVEDY--DVDGIIGIAG 180 (397)
T ss_dssp HHHHHH-HHTTCCCCSSCEEEEETTCCTHHHHHHHHH----TCEEEEECBCTTSSBCHHHHHHHHHHS--CCCEEEEEBS
T ss_pred HHHHhh-hhhcccCCCCeEEEECCcchhHHHHHHHHc----CceeEEEeeCCCCcCCHHHHHHHHhhc--CCeEEEEECC
Confidence 530000 000000124789999999999998888877 8899988875 899999999752 5788888999
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-----cccCCCCCccEEEecCcccccC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-----EQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-----~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+|++|.+.|+++|.++|++||++||+||+|+.+.++..+.+.. ..+.+..++|+++.|++|.+++
T Consensus 181 ~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~ 250 (397)
T 3f9t_A 181 TTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHC 250 (397)
T ss_dssp CTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCC
Confidence 9999999999999999999999999999999877655443211 0111111678999999999853
No 97
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.86 E-value=8.4e-21 Score=182.86 Aligned_cols=206 Identities=16% Similarity=0.080 Sum_probs=143.9
Q ss_pred ceeEEEeecCcc-CCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDY-LGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~y-Lgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~An 178 (334)
|+++|||+++.. +..-.+|.+++++.+.-........ ++......++++++++++ | .+.++++++|++|+
T Consensus 33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~ 111 (407)
T 2zc0_A 33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGAL 111 (407)
T ss_dssp SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHH
T ss_pred CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHH
Confidence 478999988642 2222568888876543211111112 333233467777888777 7 35678888889999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHh----cCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLS----CCT 250 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~----~~~ 250 (334)
..++.+++.+ ||.|++..+.|......++.. |.+++.++. .|+++|+++++ +.
T Consensus 112 ~~~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~- 172 (407)
T 2zc0_A 112 DLLGRVLIDP--------------GDVVITENPSYINTLLAFEQL----GAKIEGVPVDNDGMRVDLLEEKIKELKAKG- 172 (407)
T ss_dssp HHHHHHHCCT--------------TCEEEEEESCCHHHHHHHHTT----TCEEEEEEEETTEECHHHHHHHHHHHHHTT-
T ss_pred HHHHHHhcCC--------------CCEEEEeCCChHHHHHHHHHc----CCEEEEcccCCCCCCHHHHHHHHHhhhccc-
Confidence 9999988654 777888878887777777665 788887775 38999999987 32
Q ss_pred CCcEEE-EEcCCCCCCCCccCHH---HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC
Q 019931 251 MRKKVV-VTDSLFSMDGDFAPMV---ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 251 ~~~~lV-v~e~v~n~~G~~~pL~---~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+++++| ++++++||+|.+.|++ +|+++|++||++||+||+|+.+.++.........++.. +.+++++||||+||+
T Consensus 173 ~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~ 251 (407)
T 2zc0_A 173 QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNE-GRVIVAGTLSKVLGT 251 (407)
T ss_dssp CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSS-CCEEEEEESTTTTCT
T ss_pred CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCC-CCEEEEcccccccCC
Confidence 256776 6889999999999876 89999999999999999999765532111112222222 345889999999983
Q ss_pred --CccEEeeC
Q 019931 327 --QGGFIACR 334 (334)
Q Consensus 327 --~GG~i~~~ 334 (334)
.+||++++
T Consensus 252 G~r~G~~~~~ 261 (407)
T 2zc0_A 252 GFRIGWIIAE 261 (407)
T ss_dssp TSCCEEEECC
T ss_pred CcceEEEecC
Confidence 24888764
No 98
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.86 E-value=3.1e-22 Score=195.64 Aligned_cols=217 Identities=18% Similarity=0.157 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHccccccccccccCCCCccccccCCCCCCCCcchhcccccccccceeeeechhhhhhhhcccCCCCCC
Q 019931 8 DKWVEEALSKLEALKVLRSLRPIYLSPNDRHHRVRNPGHVGEDYEVFDEMQHWDRNAVQISISDSTFQRWLHDVPSSGDE 87 (334)
Q Consensus 8 ~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (334)
.+..|+++.++.++++.||.+.|++++|+
T Consensus 35 l~~~Dpei~~~i~~E~~RQ~~~ieLIASE--------------------------------------------------- 63 (490)
T 3ou5_A 35 LSDSDPEMWELLQREKDRQCRGLELIASE--------------------------------------------------- 63 (490)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTC---------------------------------------------------
T ss_pred hhhhCHHHHHHHHHHHHHHHcCceEecCC---------------------------------------------------
Confidence 56789999999999999999999999887
Q ss_pred cceeecCCCCCcccchhcccceeEEEeecCccCCCCCCHHHHH-----HHHHhcCCCCccccccCchHHHHHHHH----H
Q 019931 88 NEIICGDGLANDKTITFARQFKRLLLFSGNDYLGLSSHPTIAK-----AAARHGMGPRGSALICGYTNYHRLLES----C 158 (334)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~g~~~l~f~sn~yLgl~~~p~v~~-----a~~~~g~g~~~sr~~~G~~~~~~~LE~----~ 158 (334)
||+| |.|.+ ..++|..|.++.|++.|+. ..+++|. +
T Consensus 64 -------------------------N~~S---------~aV~~a~gS~ltnKYaEGyPg~RyYgGce-~vD~iE~la~~r 108 (490)
T 3ou5_A 64 -------------------------NFCS---------RAALEALGSCLNNKYSEGYPGKRYYGGAE-VVDEIELLCQRR 108 (490)
T ss_dssp -------------------------CCCC---------HHHHHHHTSGGGTCCCCC----------C-HHHHHHHHHHHH
T ss_pred -------------------------CcCC---------HHHHHHhcCcccccccCCCCCccccCCCh-HHHHHHHHHHHH
Confidence 4544 44555 3467999999999998874 3366555 4
Q ss_pred HHhHhCCCcE----EEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHH-----HHhhhcC
Q 019931 159 LADLKKKEDC----LLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGI-----RIAERTK 227 (334)
Q Consensus 159 La~~~g~e~a----lv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~-----~ls~~~~ 227 (334)
..++||++.+ -+. .||+.||++++.+|++| ||.|+...+.|+. +.++. .++....
T Consensus 109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~P--------------GD~ilg~~l~~GGHltHg~~~~~~~v~~sg~ 174 (490)
T 3ou5_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQP--------------HDRIMGLDLPDGGHLTHGYMSDVKRISATSI 174 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC---------------CCCEECBC-----------------------
T ss_pred HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCC--------------CCEEEecccCCCCcccccccCCCcccccccc
Confidence 4568898875 555 79999999999999986 8889988777655 33332 2221111
Q ss_pred CcEEEEeeC------CCHHHHHHHHhcCCCCcEEE-EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 228 MVEVFVYKH------CDMSHLKTLLSCCTMRKKVV-VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 228 g~~v~~~~~------~D~~~Le~~l~~~~~~~~lV-v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
-.+.+.|.. .|++.++++.++. ++++| +.-+.|+. ..|+++++++|++.|++|++|.||..|++-
T Consensus 175 ~~~~~~Y~vd~~t~~IDyd~~~~~A~~~--kPklIi~G~SaY~r---~id~~~~reIAd~vGA~Lm~DmAHiaGLVA--- 246 (490)
T 3ou5_A 175 FFESMPYKLNPKTGLIDYNQLALTARLF--RPRLIIAGTSAYAR---LIDYARMREVCDEVKAHLLADMAHISGLVA--- 246 (490)
T ss_dssp -----CBCEETTTTEECHHHHHHHHHHH--CCSEEEECCSSCCS---CCCHHHHHHHHHHHTCEEEEECGGGHHHHH---
T ss_pred cccccccccCCCCCcccHHHHHHHHhhc--CCCeEEECCccCcc---ccCHHHHHHHHhhcccEEEechhhhhhhhc---
Confidence 223444432 2999999999875 45554 55566655 789999999999999999999999999873
Q ss_pred cccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 301 GGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 301 ~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
.|. +.++.+.+||+++|.+|+| |+.||+|+++
T Consensus 247 ~g~--~psP~~~ADvVTtTTHKTLrGPrGG~Il~~ 279 (490)
T 3ou5_A 247 AKV--IPSPFKHADIVTTTTHKTLRGARSGLIFYR 279 (490)
T ss_dssp TTS--SCCGGGTCSEEEEESSSTTCSCSCEEEEEE
T ss_pred ccc--cCCccccceEEeccccccccCCCceEEEec
Confidence 233 3344567999999999999 7899999873
No 99
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.86 E-value=1.7e-20 Score=181.31 Aligned_cols=160 Identities=14% Similarity=0.092 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|++++|.+++++++||++|+..++.+++++ ||.|++....|.+....+.......|
T Consensus 58 ~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~~~--------------gd~vl~~~~~y~~~~~~~~~~~~~~g 123 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFLQK--------------GDHLIAGDTLYGCTVSLFTHWLPRFG 123 (389)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTCCT--------------TCEEEEESSCCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 5778999999999999999999999999999999877654 77788777888876665432111228
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.+++.++..|+++|++++++ ++++|++++++||+|.+.|+++|.++|++||+++|+|++|+.+.++. . ..
T Consensus 124 ~~~~~v~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~---~----~~ 193 (389)
T 3acz_A 124 IEVDLIDTSDVEKVKAAWKP---NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK---P----LE 193 (389)
T ss_dssp CEEEEECTTCHHHHHHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC---G----GG
T ss_pred CEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC---c----cc
Confidence 89999999999999998864 78999999999999999999999999999999999999999775421 1 11
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
.++||++.|++|++|+. ||+++++
T Consensus 194 --~~~di~~~S~sK~~~~~~~~~~G~v~~~ 221 (389)
T 3acz_A 194 --LGADIALHSVSKYINGHGDVIGGVSSAK 221 (389)
T ss_dssp --TTCSEEEEETTTTTTCSSCCCCEEEEES
T ss_pred --cCCeEEEECChhhccCCCCceeEEEEEC
Confidence 35689999999999864 6888764
No 100
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.85 E-value=4.2e-20 Score=177.44 Aligned_cols=202 Identities=17% Similarity=0.155 Sum_probs=147.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAVI 182 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~ai 182 (334)
++.+++|+++++ .+..+|.+++++.+. ..+...+....|...+.+++.+.+.+..|. ++++++++|++|+..++
T Consensus 30 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 30 GVDLVALTAGEP-DFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF 108 (385)
T ss_dssp TCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCCEEEecCCCC-CCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence 367899999875 666688998876553 222223333345555555555555544452 56888899999999999
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~l 255 (334)
.+++++ ||.|++..+.|..+...++.. |.+++.++.+ |+++|++++++ ++++
T Consensus 109 ~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~ 167 (385)
T 1b5p_A 109 QAILDP--------------GDEVIVLSPYWVSYPEMVRFA----GGVVVEVETLPEEGFVPDPERVRRAITP---RTKA 167 (385)
T ss_dssp HHHCCT--------------TCEEEEEESCCTHHHHHHHHT----TCEEEEEECCGGGTTCCCHHHHHTTCCT---TEEE
T ss_pred HHhcCC--------------CCEEEEcCCCchhHHHHHHHc----CCEEEEeecCcccCCCCCHHHHHHhcCC---CCEE
Confidence 988764 788888888888887777766 8888888752 67778777753 6888
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---c
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G 329 (334)
|++.+++||+|.+.| +++|.++|++||++||+||+|+...++. .......+.++.+|+++||||+||..| |
T Consensus 168 v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 244 (385)
T 1b5p_A 168 LVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG---EHFSPGRVAPEHTLTVNGAAKAFAMTGWRIG 244 (385)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS---CCCCGGGTCTTTEEEEEESTTTTTCGGGCCE
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC---CCCCHHHcCCCCEEEEEechhhcCCcccceE
Confidence 888899999999876 8899999999999999999999765532 111111222255799999999998766 8
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 245 ~~~~~ 249 (385)
T 1b5p_A 245 YACGP 249 (385)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 88764
No 101
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.85 E-value=9.6e-21 Score=179.26 Aligned_cols=191 Identities=15% Similarity=0.112 Sum_probs=144.7
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhc---CC--CCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHG---MG--PRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g---~g--~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~ 183 (334)
|+|++++. ..+|.+++++.++- .+ ...++...+..+..+++++++++++|.+ .++++++|++|+..++.
T Consensus 3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~ 78 (382)
T 4hvk_A 3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHH
T ss_pred eecCCCcC----CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHH
Confidence 45555542 35788998776532 11 1122333344677889999999999975 47778999999999999
Q ss_pred HHh----hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcE
Q 019931 184 AVG----NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 184 al~----~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~ 254 (334)
++. ++ ||.|+++...|.++...+.... ..|++++.++.+ |+++|++++++ +++
T Consensus 79 ~~~~~~~~~--------------gd~vi~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~ 140 (382)
T 4hvk_A 79 GYAMRNARK--------------GKHILVSAVEHMSVINPAKFLQ-KQGFEVEYIPVGKYGEVDVSFIDQKLRD---DTI 140 (382)
T ss_dssp HHHHHHGGG--------------CCEEEEETTCCHHHHHHHHHHH-HTTCEEEEECBCTTSCBCHHHHHHHCCT---TEE
T ss_pred HhhhhhcCC--------------CCEEEECCCCcHHHHHHHHHHH-hcCCEEEEeccCCCCCcCHHHHHHHhcc---Cce
Confidence 887 44 7889999999999887766542 227888888764 89999998864 789
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCCc-cEEe
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+|++++++|++|.+.|+++|.++|++||+ +|+|++|+.|... +++. .++|+++.|+||.+|+.| |+++
T Consensus 141 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~g~g~~~ 210 (382)
T 4hvk_A 141 LVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIE---------VDVEKIGADMLTISSNDIYGPKGVGALW 210 (382)
T ss_dssp EEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBC---------CCHHHHTCSEEEEESGGGTSCTTCEEEE
T ss_pred EEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCC---------CCchhcCCCEEEEeHHHhcCCCceEEEE
Confidence 99999999999999999999999999999 9999999876431 1111 246899999999888764 5554
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
+
T Consensus 211 ~ 211 (382)
T 4hvk_A 211 I 211 (382)
T ss_dssp E
T ss_pred E
Confidence 3
No 102
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.85 E-value=1.5e-20 Score=182.02 Aligned_cols=200 Identities=16% Similarity=0.091 Sum_probs=145.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCC--CccccccCchHHHHHHHHHHHhHh----CC-----CcEEEeccHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGP--RGSALICGYTNYHRLLESCLADLK----KK-----EDCLLCPTGFA 176 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~--~~sr~~~G~~~~~~~LE~~La~~~----g~-----e~alv~~sG~~ 176 (334)
|+++|||+++++ .+..+|.+++++.+.-... .++....| ..+|++++++++ |. +.++++++|++
T Consensus 46 g~~~idl~~g~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~ 120 (404)
T 2o1b_A 46 PLPLINMAVGIP-DGPTPQGIIDHFQKALTIPENQKYGAFHG----KEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKN 120 (404)
T ss_dssp SSCCEECCCCSC-SSCCCHHHHHHHHHHTTCHHHHSCCCTTC----CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHH
T ss_pred CCCEEecCCcCC-CCCCCHHHHHHHHHHHhCCCCCCCCCCCC----CHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHH
Confidence 578999999875 5667899999887653211 11111123 355666666665 74 36778888899
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCT 250 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~ 250 (334)
|+..++.+++++ ||.|++..+.|.+....++.. +.+++.++. .|+++|+++++.
T Consensus 121 al~~~~~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~-- 180 (404)
T 2o1b_A 121 GLVAVPTCVINP--------------GDYVLLPDPGYTDYLAGVLLA----DGKPVPLNLEPPHYLPDWSKVDSQIID-- 180 (404)
T ss_dssp HHHHHHHHHCCT--------------TCEEEEEESCCSSHHHHHHHT----TCEEEEEECCTTTCCCCGGGSCHHHHH--
T ss_pred HHHHHHHHhcCC--------------CCEEEEcCCCchhHHHHHHHC----CCEEEEeccCcccCcCCHHHHHHhhcc--
Confidence 999999988754 777888888888888777766 788888775 378899988864
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++.....+....+ ..+.+|+++||||+||+.
T Consensus 181 -~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~g~~ 258 (404)
T 2o1b_A 181 -KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN-GKDVAIEIYSLSKGYNMS 258 (404)
T ss_dssp -HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT-HHHHEEEEEESTTTTTCG
T ss_pred -CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC-CCCCEEEEEecchhccCc
Confidence 6788888899999999886 78899999999999999999997655321111211110 124579999999999866
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 259 G~r~G~~~~~ 268 (404)
T 2o1b_A 259 GFRVGFAVGN 268 (404)
T ss_dssp GGCCEEEEEC
T ss_pred hhheEeEecC
Confidence 6 888764
No 103
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.85 E-value=9.8e-21 Score=181.54 Aligned_cols=194 Identities=14% Similarity=0.105 Sum_probs=145.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHh-----cCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARH-----GMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~-----g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ 180 (334)
+.-|+|+.++. ..+|.+++++.++ +.....+....+..+..+++++++++++|.+ .++++++|++|+..
T Consensus 20 ~~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~ 95 (400)
T 3vax_A 20 HMTYLDAAATT----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNI 95 (400)
T ss_dssp --CCCCCCCCS----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHH
T ss_pred CcEEecCCCCC----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHH
Confidence 35677777764 3589998876543 2221112222233466789999999999975 68888999999999
Q ss_pred HHHHHh----hhhhhccCCCccCCCCCe-EEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC
Q 019931 181 VIVAVG----NIASLLAGDEKSFKDEKI-AIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT 250 (334)
Q Consensus 181 ai~al~----~~~~~~~~~~~~~~~~gd-~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~ 250 (334)
++.++. ++ || .|+++...|.++...+.... ..|++++.++.+ |+++|++++++
T Consensus 96 ~~~~l~~~~~~~--------------gd~~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~d~~~l~~~i~~-- 158 (400)
T 3vax_A 96 ALLGLAPYGERT--------------GRRHIITSAIEHKAVLEPLEHLA-GRGFEVDFLTPGPSGRISVEGVMERLRP-- 158 (400)
T ss_dssp HHHTTHHHHHHH--------------TCCEEEEETTSCHHHHHHHHHHH-TTTCEEEEECCCTTCCCCHHHHHTTCCT--
T ss_pred HHHHHHHhhccC--------------CCCEEEECccccHhHHHHHHHHH-hcCCeEEEEccCCCCCcCHHHHHHhcCC--
Confidence 999876 44 78 89988899998877766542 237888888764 88888888764
Q ss_pred CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-c
Q 019931 251 MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-G 329 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G 329 (334)
++++|++++++||+|.+.|+++|.++|++||++||+|++|+.+.... .+ .. . +|+++.|++|.+|+.| |
T Consensus 159 -~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---~~---~~--~-~d~~~~s~~K~~g~~g~g 228 (400)
T 3vax_A 159 -DTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG---DL---TT--P-IDMISISGHKIGAPKGVG 228 (400)
T ss_dssp -TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG---GG---GS--C-CSEEEEETGGGTSCSSCE
T ss_pred -CceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc---Ch---hh--c-CcEEEEeHHHhCCCCceE
Confidence 78999999999999999999999999999999999999999764311 11 11 1 6899999999888754 5
Q ss_pred EEe
Q 019931 330 FIA 332 (334)
Q Consensus 330 ~i~ 332 (334)
+++
T Consensus 229 ~~~ 231 (400)
T 3vax_A 229 ALV 231 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 104
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.85 E-value=6.7e-21 Score=181.03 Aligned_cols=201 Identities=15% Similarity=0.068 Sum_probs=147.5
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~a 184 (334)
+|+.+|||++|++ .+..+|.|++++.+.-...+.....++. +...+|++++++++|. +.++++++|++|+..++.+
T Consensus 24 ~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~ 101 (360)
T 3hdo_A 24 DIASWIKLNTNEN-PYPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRA 101 (360)
T ss_dssp CCTTSEECSSCCC-SSCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHH
T ss_pred cccceeeccCCCC-CCCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHH
Confidence 3478999999985 6788999999887643221000011111 2237899999999994 6789999999999999998
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCC
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSM 264 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~ 264 (334)
++++ ||.|++..+.|.+....++.. |.+++.++.++--.++++++.. ++++|++++++||
T Consensus 102 l~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~l~~~~--~~~~v~i~~p~np 161 (360)
T 3hdo_A 102 FAAE--------------GEEIGYVHPSYSYYGTLAEVQ----GARVRTFGLTGDFRIAGFPERY--EGKVFFLTTPNAP 161 (360)
T ss_dssp HCCT--------------TCEEEEESSSCTHHHHHHHHH----TCEEEEECBCTTSSBTTCCSSB--CSSEEEEESSCTT
T ss_pred HhCC--------------CCEEEEcCCChHHHHHHHHHC----CCEEEEeeCCCCCCHHHHHhhc--CCCEEEEeCCCCC
Confidence 8764 788888888888888887776 8899888875322233333322 3568889999999
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+|.+.|+++|.++|+++|++||+||+|+.. .+ .+.....+ ..+.+++++||||++|+.| ||++++
T Consensus 162 tG~~~~~~~l~~l~~~~~~~li~De~~~~~-~~---~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 229 (360)
T 3hdo_A 162 LGPSFPLEYIDELARRCAGMLVLDETYAEF-AE---SNALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIAR 229 (360)
T ss_dssp TCCCCCHHHHHHHHHHBSSEEEEECTTGGG-SS---CCCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEECC
T ss_pred CCCCcCHHHHHHHHHHCCCEEEEECChHhh-CC---cchhHHhc-cCCCEEEEecchHhhcCCccceeeEeeC
Confidence 999999999999999999999999999852 22 22221111 1244688999999998766 888763
No 105
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.85 E-value=9e-21 Score=180.23 Aligned_cols=192 Identities=16% Similarity=0.117 Sum_probs=144.3
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcC---CCCc--cccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGM---GPRG--SALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~---g~~~--sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~ 183 (334)
|+|++++. ..+|.|++++.++-. +... +....+..+...++++++++++|.+ .++++++|++|+..++.
T Consensus 3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~ 78 (382)
T 4eb5_A 3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII 78 (382)
T ss_dssp BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHH
T ss_pred eeccCCCC----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHH
Confidence 56666653 468999998765422 2111 1111223467899999999999975 57777999999999999
Q ss_pred HHh----hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcE
Q 019931 184 AVG----NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKK 254 (334)
Q Consensus 184 al~----~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~ 254 (334)
++. ++ ||.|+++...|.++...+..... .|++++.++. .|+++|++++++ +++
T Consensus 79 ~l~~~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~i~~---~~~ 140 (382)
T 4eb5_A 79 GYAMRNARK--------------GKHILVSAVEHMSVINPAKFLQK-QGFEVEYIPVGKYGEVDVSFIDQKLRD---DTI 140 (382)
T ss_dssp HHHHHHGGG--------------CCEEEEETTCCHHHHHHHHHHTT-TTCEEEEECBCTTSCBCHHHHHHHCCT---TEE
T ss_pred HHHhhccCC--------------CCEEEECCCcchHHHHHHHHHHh-CCcEEEEeccCCCCccCHHHHHHHhcC---CCe
Confidence 887 43 78899999999988777765321 2788888875 388999988864 689
Q ss_pred EEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEee
Q 019931 255 VVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 255 lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
+|++++++||+|.+.|+++|.++|++||++ |+|++|++|... ..+ .. .++|++++|+||.+|..| |++++
T Consensus 141 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~---~~~-~~----~~~di~~~s~sK~~g~~g~G~~~~ 211 (382)
T 4eb5_A 141 LVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIE---VDV-EK----IGADMLTISSNDIYGPKGVGALWI 211 (382)
T ss_dssp EEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBC---CCH-HH----HTCSEEEEETGGGTCCSSCEEEEE
T ss_pred EEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcc---cCc-cc----cCCCEEEeehHHhcCCCceEEEEE
Confidence 999999999999999999999999999999 999999964221 111 11 146899999999988765 66654
No 106
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.85 E-value=2.9e-20 Score=180.89 Aligned_cols=184 Identities=17% Similarity=0.139 Sum_probs=138.7
Q ss_pred CCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccC
Q 019931 120 LGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSF 199 (334)
Q Consensus 120 Lgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~ 199 (334)
+++...+.+++++.+ ..+ +.+.....+.++++|+++++++|.+++++++||++|+..++.+++++
T Consensus 30 ~~~~~~~~~~~~~~~-~~~---~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~~~----------- 94 (412)
T 2cb1_A 30 YGFKTLEEGQERFAT-GEG---YVYARQKDPTAKALEERLKALEGALEAVVLASGQAATFAALLALLRP----------- 94 (412)
T ss_dssp CCCSSHHHHHHHHHH-CCS---CSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCT-----------
T ss_pred eecCChHHHHHHhcc-ccC---cCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCC-----------
Confidence 567655556555542 111 11222234778999999999999999999999999999999887653
Q ss_pred CCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHH
Q 019931 200 KDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRR 279 (334)
Q Consensus 200 ~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~ 279 (334)
+|.|++....|.++...+.......+.+++.++. |+++|++++++ ++++|++++++|++|.+.|+++|.++|+
T Consensus 95 ---gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~l~~i~~l~~ 167 (412)
T 2cb1_A 95 ---GDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEAVREALSA---KTRAVFVETVANPALLVPDLEALATLAE 167 (412)
T ss_dssp ---TCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred ---CCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHHHHHHhcc---CCeEEEEeCCCCCCcccccHHHHHHHHH
Confidence 7888888888988776654311223788888876 48899988864 7899999999999999999999999999
Q ss_pred HcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEee
Q 019931 280 KYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIAC 333 (334)
Q Consensus 280 k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~ 333 (334)
+||+++|+|++|+.+.+. .. ....++|+++.|++|.+++ .||++++
T Consensus 168 ~~~~~li~D~~~~~~~~~--~~------~~~~~~di~~~S~~K~~~~~~~~~G~~~~~ 217 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGAL--CR------PLAWGAHVVVESLTKWASGHGSVLGGAVLS 217 (412)
T ss_dssp HHTCEEEEECGGGTTTTS--CC------GGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred HcCCEEEEECCCcccccc--CC------ccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 999999999999875110 11 1123578999999999975 4666654
No 107
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.5e-20 Score=184.78 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=146.4
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCC--CCccccccCchHHHHHHHHHHHhHhCC----CcEEEeccHHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMG--PRGSALICGYTNYHRLLESCLADLKKK----EDCLLCPTGFAANMAV 181 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g--~~~sr~~~G~~~~~~~LE~~La~~~g~----e~alv~~sG~~An~~a 181 (334)
++++|||+.+. ..+..+|.+++++.+.-.. ...+....|..++.+++.+.+.+++|. +.++++++|++|+..+
T Consensus 56 ~~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~ 134 (447)
T 3b46_A 56 GRELINLGQGF-FSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSC 134 (447)
T ss_dssp TSCCEECCCCS-CSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHH
T ss_pred CCCeEEccCCC-CCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence 47899998885 4777899999988765332 222323334444444454544444453 4688889999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----------------CCHHHHHH
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----------------CDMSHLKT 244 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----------------~D~~~Le~ 244 (334)
+.+++.+ ||.|++..+.|..+...++.. |.+++.++. .|+++|++
T Consensus 135 ~~~l~~~--------------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~ 196 (447)
T 3b46_A 135 LMGLLNA--------------GDEVIVFEPFFDQYIPNIELC----GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEK 196 (447)
T ss_dssp HHHHCCT--------------TCEEEEEESCCTTHHHHHHHT----TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHT
T ss_pred HHHHcCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEEeCCCccccccccccccCcccCHHHHHH
Confidence 9988764 777887778888888777766 777776652 37788887
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccc-cCCCCCccEEEecC
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQ-FNCERDVDICVGTL 320 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~-~~~~~~~Div~~Sl 320 (334)
+++ +++++|++++++||+|.+.+ +++|+++|++||++||+||+|+...++.....+... .+ ..+.|++++||
T Consensus 197 ~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~~i~i~S~ 272 (447)
T 3b46_A 197 AIT---SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPE-IGQLTLTVGSA 272 (447)
T ss_dssp TCC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHH-HHTTEEEEEEH
T ss_pred hhc---cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCC-CCCcEEEEecC
Confidence 775 37899999999999998864 889999999999999999999976554211122111 01 13568999999
Q ss_pred cccccCCc---cEEee
Q 019931 321 SKAAGCQG---GFIAC 333 (334)
Q Consensus 321 sKa~G~~G---G~i~~ 333 (334)
||+||+.| ||+++
T Consensus 273 sK~~~~~G~riG~~~~ 288 (447)
T 3b46_A 273 GKSFAATGWRIGWVLS 288 (447)
T ss_dssp HHHTTCTTSCCEEEEC
T ss_pred chhcCCcchhhEEEEe
Confidence 99999777 88876
No 108
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.85 E-value=3.9e-21 Score=183.19 Aligned_cols=192 Identities=18% Similarity=0.194 Sum_probs=143.5
Q ss_pred eEEEeecCccCCCCCCH--HHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHHHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHP--TIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p--~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~~An~~ai~a 184 (334)
.+.+|+.++++++..++ ++.+++.+ +... ++......+|+++++++++ .++++++++|++|+..++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~ 100 (375)
T 3op7_A 28 SISSLTLEELFALSGTNPEDFYKKLQG---TKLN----YGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYS 100 (375)
T ss_dssp SCCCCCHHHHHHHHTCCHHHHHHHHHT---SCCS----SCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHH
T ss_pred CCCCccHHHHHhhcccchHHHHHHHhc---CCcC----CCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHH
Confidence 34467777777777654 44444433 2211 2222234789999999863 36799999999999999998
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEEEE
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lVv 257 (334)
++++ ||.|++..+.|.++...++.. |++++.++.+ |+++|++++++ ++++|+
T Consensus 101 l~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~v~ 159 (375)
T 3op7_A 101 LIEP--------------GDHVISLYPTYQQLYDIPKSL----GAEVDLWQIEEENGWLPDLEKLRQLIRP---TTKMIC 159 (375)
T ss_dssp HCCT--------------TCEEEEEESSCTHHHHHHHHT----TCEEEEEEEEGGGTTEECHHHHHHHCCT---TCCEEE
T ss_pred hcCC--------------CCEEEEeCCCchhHHHHHHHc----CCEEEEEeccccCCCCCCHHHHHHhhcc---CCeEEE
Confidence 8764 788888888888888777766 7888877753 88999998864 788999
Q ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEE
Q 019931 258 TDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 258 ~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i 331 (334)
+++++||+|.+.| +++|+++|++||++||+||+|+.+.++ +.... ... .+.+++++||||++|..| |++
T Consensus 160 ~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~--~~~~~--~~~-~~~~i~~~s~sK~~~~~G~r~G~v 234 (375)
T 3op7_A 160 INNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL--DVPSI--IEV-YDKGIAVNSLSKTYSLPGIRIGWV 234 (375)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS--CCCCH--HHH-CTTEEEEEESSSSSSCGGGCCEEE
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc--CCCch--hhh-cCCEEEEeEChhhcCCcccceEEE
Confidence 9999999999999 999999999999999999999975443 11111 111 234688999999998655 888
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 235 ~~~ 237 (375)
T 3op7_A 235 AAN 237 (375)
T ss_dssp ECC
T ss_pred EeC
Confidence 763
No 109
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.85 E-value=1.7e-20 Score=178.54 Aligned_cols=205 Identities=16% Similarity=0.124 Sum_probs=143.4
Q ss_pred cccceeEEEeecCcc-CCCC-CCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhCC-CcEEEeccHHHHHH
Q 019931 105 ARQFKRLLLFSGNDY-LGLS-SHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKKK-EDCLLCPTGFAANM 179 (334)
Q Consensus 105 ~~~g~~~l~f~sn~y-Lgl~-~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~-e~alv~~sG~~An~ 179 (334)
+.+|+.|+||+++.+ ..+. .+|.+++++.+.-. +..... + ..+...+|+++|++++|. ++++++++|++|+.
T Consensus 24 ~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~-y--~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~ 100 (375)
T 2eh6_A 24 DEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNL-Y--ENPWQEELAHKLVKHFWTEGKVFFANSGTESVE 100 (375)
T ss_dssp ETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTT-B--CCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHH
T ss_pred eCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcc-c--CCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHH
Confidence 355699999999865 4666 68999997765321 111111 1 135678999999999998 78889999999999
Q ss_pred HHHHHH---h---hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---CCc-----EEEEeeCCCHHHHHHH
Q 019931 180 AVIVAV---G---NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---KMV-----EVFVYKHCDMSHLKTL 245 (334)
Q Consensus 180 ~ai~al---~---~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~g~-----~v~~~~~~D~~~Le~~ 245 (334)
.++.++ . ++ +++.+|+.+..+|........+.... .+. .+..+++.|+++|+++
T Consensus 101 ~~~~~~~~~~~~~~~------------g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 168 (375)
T 2eh6_A 101 AAIKLARKYWRDKGK------------NKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHTTC------------CCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTT
T ss_pred HHHHHHHHHhccCCC------------CCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHH
Confidence 999753 2 22 11344555566677665554433110 011 2667777899999988
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecC
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTL 320 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~Sl 320 (334)
+++ ++++|++++++|++|.+.| +++|.++|++||++||+||+|+ + +|..+.++ ...++.. .|++ ||
T Consensus 169 l~~---~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~-~~~~~~~~~~~~~~~~--~d~~--s~ 239 (375)
T 2eh6_A 169 LDE---ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-G-IGRTGEFYAYQHFNLK--PDVI--AL 239 (375)
T ss_dssp CCT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSGGGGGTCC--CSEE--EE
T ss_pred hcC---CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-C-CCCCCcchhhhhcCCC--CCEE--EE
Confidence 863 7899999999999999988 9999999999999999999999 3 45444433 2334432 4665 88
Q ss_pred cccccC-C-ccEEee
Q 019931 321 SKAAGC-Q-GGFIAC 333 (334)
Q Consensus 321 sKa~G~-~-GG~i~~ 333 (334)
||.+++ . .|++++
T Consensus 240 SK~~~~g~~~G~~~~ 254 (375)
T 2eh6_A 240 AKGLGGGVPIGAILA 254 (375)
T ss_dssp CGGGGTTSCCEEEEE
T ss_pred cccccCCCCeEEEEE
Confidence 899985 1 266654
No 110
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.85 E-value=1.8e-20 Score=177.70 Aligned_cols=185 Identities=12% Similarity=0.046 Sum_probs=139.1
Q ss_pred CCHHHHHHHHHhcCCCC------ccccccCchHHHHHHHHH-HHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCC
Q 019931 124 SHPTIAKAAARHGMGPR------GSALICGYTNYHRLLESC-LADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDE 196 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~------~sr~~~G~~~~~~~LE~~-La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~ 196 (334)
.+|.+++++.++..... .++...+..+...+++++ +++++|.+.++++++|++|+..++.++.++
T Consensus 21 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~-------- 92 (371)
T 2e7j_A 21 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKK-------- 92 (371)
T ss_dssp CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCT--------
T ss_pred CCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCC--------
Confidence 58999998887654321 223334445667899999 999999885555577799999999988654
Q ss_pred ccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEee--CC-----CHHHHHHHHhcCC--CCcEEEEEcCCCCCCCC
Q 019931 197 KSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYK--HC-----DMSHLKTLLSCCT--MRKKVVVTDSLFSMDGD 267 (334)
Q Consensus 197 ~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~--~~-----D~~~Le~~l~~~~--~~~~lVv~e~v~n~~G~ 267 (334)
+|.|++..+.|.+....++.. |.+++.++ .+ |+++|++++++.. +++++|++++++|++|.
T Consensus 93 ------gd~vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~ 162 (371)
T 2e7j_A 93 ------DAWVVMDENCHYSSYVAAERA----GLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGN 162 (371)
T ss_dssp ------TCEEEEETTCCHHHHHHHHHT----TCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCC
T ss_pred ------CCEEEEccCcchHHHHHHHHc----CCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcc
Confidence 788999999999888887766 88888888 65 8999999997421 26889999999999999
Q ss_pred ccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC--CccEEeeC
Q 019931 268 FAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC--QGGFIACR 334 (334)
Q Consensus 268 ~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~--~GG~i~~~ 334 (334)
+.|+++|.++|++||++||+|++|+.|..+. .. ..+ ++|++++|+||++++ .+|+++++
T Consensus 163 ~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~---~~-~~~----~~di~~~s~sK~~~~~~~~G~~~~~ 223 (371)
T 2e7j_A 163 LPDVKKIAKVCSEYDVPLLVNGAYAIGRMPV---SL-KEI----GADFIVGSGHKSMAASGPIGVMGMK 223 (371)
T ss_dssp CCCHHHHHHHHHTTTCCEEEECTTTBTTBCC---CH-HHH----TCSEEEEEHHHHSSCCSSCEEEEEC
T ss_pred cCCHHHHHHHHHHcCCeEEEECccccCCCCC---Ch-hhc----CCCEEEecCCcCCCCCCCcEEEEEe
Confidence 9999999999999999999999999865421 11 111 357999999999865 23888764
No 111
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.85 E-value=3.1e-20 Score=184.09 Aligned_cols=205 Identities=12% Similarity=0.122 Sum_probs=144.6
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhC---CCcEEEeccHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKK---KEDCLLCPTGF 175 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~alv~~sG~ 175 (334)
.+|.+|++||||.++ ..||. +||+|++|+++. ......+. ....++...+|.++|+++.. .+.+++++||+
T Consensus 58 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGs 135 (456)
T 4atq_A 58 IRDVDGNSFIDLGSGIAVTSVGA-SDPAVVAAVQEAAAHFTHTCF-MVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGA 135 (456)
T ss_dssp EEETTSCEEEESSHHHHTCTTCT-TCHHHHHHHHHHHHHCSCCTT-TTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHH
T ss_pred EEeCCCCEEEEccccHHHHhcCC-CCHHHHHHHHHHHhhccCccc-CccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChH
Confidence 467889999999774 45777 599999987543 22222211 22234666789999999985 34678889999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC---------CcEEEEeeC----------
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK---------MVEVFVYKH---------- 236 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~---------g~~v~~~~~---------- 236 (334)
+||+.+++.... .+++..+|..+..+|+.....+.+..... ...+..++.
T Consensus 136 EA~e~AlklAr~-----------~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~ 204 (456)
T 4atq_A 136 EAVENAVKVARL-----------ATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPE 204 (456)
T ss_dssp HHHHHHHHHHHH-----------HHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTT
T ss_pred HHHHHHHHHHhh-----------hhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCc
Confidence 999999996443 23457788889999998766555442110 112333332
Q ss_pred -CCHHHHHHHHhc----C-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-c
Q 019931 237 -CDMSHLKTLLSC----C-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-E 305 (334)
Q Consensus 237 -~D~~~Le~~l~~----~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~ 305 (334)
++.+.+++.++. . ..+...|++|++.+..|.+.| |++|+++|++||++||+||+++. +|++|.+++ +
T Consensus 205 ~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG--~GRtG~~~a~e 282 (456)
T 4atq_A 205 ITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSG--FCRTGEWFAVD 282 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGG
T ss_pred ccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccc--cCCcccccccc
Confidence 133444433321 1 235789999999999898766 99999999999999999999984 789998774 7
Q ss_pred ccCCCCCccEEEecCcccccC
Q 019931 306 QFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++.| ||+ ||+|++|.
T Consensus 283 ~~gv~P--Div--t~gK~lgg 299 (456)
T 4atq_A 283 HEGVVP--DII--TMAKGIAG 299 (456)
T ss_dssp GTTCCC--SEE--EECGGGGT
T ss_pred ccCCCC--chh--hhhhcccC
Confidence 899988 555 89999974
No 112
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.85 E-value=2.3e-20 Score=180.55 Aligned_cols=200 Identities=15% Similarity=0.140 Sum_probs=144.6
Q ss_pred eeEEEeecCc---cCCCCCCHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHhC--------------CCcEE
Q 019931 109 KRLLLFSGND---YLGLSSHPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLKK--------------KEDCL 169 (334)
Q Consensus 109 ~~~l~f~sn~---yLgl~~~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~g--------------~e~al 169 (334)
+++++|++++ |..+..+|.+++++.+.- .+. ..+ +......+++++++++++ .++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y----~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~ 108 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGY----FPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVV 108 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSC----CCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEE
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCc----CCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEE
Confidence 5689999887 357888999999876542 221 111 111223567777777766 35788
Q ss_pred EeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHH
Q 019931 170 LCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHL 242 (334)
Q Consensus 170 v~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~L 242 (334)
++++|++|+..++.+++++ ||.|++..+.|.++...++.. |++++.++. .|+++|
T Consensus 109 ~~~g~~~al~~~~~~l~~~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l 170 (416)
T 1bw0_A 109 LCSGGSHGILMAITAICDA--------------GDYALVPQPGFPHYETVCKAY----GIGMHFYNCRPENDWEADLDEI 170 (416)
T ss_dssp EESHHHHHHHHHHHHHCCT--------------TCEEEEEESCCTHHHHHHHHT----TCEEEEEEEEGGGTTEECHHHH
T ss_pred EeCChHHHHHHHHHHhCCC--------------CCEEEEcCCCcHhHHHHHHHc----CcEEEEeecCcccCCCCCHHHH
Confidence 8899999999999988754 778888878888777777665 788877763 378889
Q ss_pred HHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCc--ccccccCCCC-CccEE
Q 019931 243 KTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG--GVAEQFNCER-DVDIC 316 (334)
Q Consensus 243 e~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~--g~~~~~~~~~-~~Div 316 (334)
++++++ ++++|++.+++||+|.+.| +++|+++|++||++||+||+|+...++.... .......+.. ..+|+
T Consensus 171 ~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~ 247 (416)
T 1bw0_A 171 RRLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVI 247 (416)
T ss_dssp HHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEE
T ss_pred HHHhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEE
Confidence 888864 6788888889999999998 9999999999999999999999755432200 2211122222 23588
Q ss_pred EecCcccccCCc---cEEee
Q 019931 317 VGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 317 ~~SlsKa~G~~G---G~i~~ 333 (334)
++||||+|++.| ||+++
T Consensus 248 ~~s~sK~~~~~Glr~G~~~~ 267 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLLY 267 (416)
T ss_dssp EEESTTTTSCGGGCCEEEEE
T ss_pred EecchhhCCCCCceEEEEEe
Confidence 999999997655 78765
No 113
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.85 E-value=1.3e-20 Score=177.45 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=143.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNI 188 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~ 188 (334)
.++|+|++|.+.. .+|.+++++.+...+. ..++..+...+||++|++++|.+.++++++|++|+..++.++.++
T Consensus 3 ~~~i~~~~~~~~~--p~~~~~~a~~~~~~~~----~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~ 76 (347)
T 1jg8_A 3 HMMIDLRSDTVTK--PTEEMRKAMAQAEVGD----DVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQR 76 (347)
T ss_dssp --CEECSCGGGCC--CCHHHHHHHHTCCCCC----GGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCT
T ss_pred ceEEEeccccCCC--CCHHHHHHHhcCCCCC----cccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCC
Confidence 5678999997654 5688888887543221 134445777899999999999999999999999999999887654
Q ss_pred hhhccCCCccCCCCCeEEEEcCCCchhhHH---HHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcC---CCCcEEEE
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDALNHASIID---GIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCC---TMRKKVVV 257 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~---g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~---~~~~~lVv 257 (334)
||.|++..+.|.+... .+... |++++.+ .+ |+++|++++++. .+++++|+
T Consensus 77 --------------gd~Vl~~~~~~~~~~~~~~~~~~~----g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~ 137 (347)
T 1jg8_A 77 --------------GDEVILEADSHIFWYEVGAMAVLS----GVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIA 137 (347)
T ss_dssp --------------TCEEEEETTCHHHHSSTTHHHHHT----CCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEE
T ss_pred --------------CCEEEEcCcchhhhccccchhhcc----CeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEE
Confidence 7888888889876543 23334 7787777 42 889999988642 12689999
Q ss_pred EcCCCCCC-CCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEe
Q 019931 258 TDSLFSMD-GDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIA 332 (334)
Q Consensus 258 ~e~v~n~~-G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~ 332 (334)
+++++||+ |.+.| +++|.++|++||++|++|++|..+.++..+.... .+...+|+++.|+||++|+ .|++++
T Consensus 138 ~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~---~~~~~~d~~~~s~sK~l~~~~G~~~~ 214 (347)
T 1jg8_A 138 IENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVK---EYAGYADSVMFCLSKGLCAPVGSVVV 214 (347)
T ss_dssp EESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHH---HHHHTCSEEEEESSSTTCCSSCEEEE
T ss_pred EeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChH---HhcccccEEEEecccccCCCceEEEE
Confidence 99999999 98877 5688999999999999999987542221111111 1112457778899999985 565666
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
+
T Consensus 215 ~ 215 (347)
T 1jg8_A 215 G 215 (347)
T ss_dssp E
T ss_pred c
Confidence 4
No 114
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=6.5e-20 Score=176.32 Aligned_cols=160 Identities=14% Similarity=0.131 Sum_probs=130.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+++++|+++++.++.+++++|++|+..++.++.++ +|.|++....|.+....+.......+
T Consensus 51 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~~~--------------g~~vl~~~~~~~~~~~~~~~~~~~~g 116 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKP--------------GDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEETTCCHHHHHHHHHHHTTTS
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCC--------------CCEEEEecCCcHhHHHHHHHHHHhcC
Confidence 4667999999999999888999999999999999987654 77788888888876665532212237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccC
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFN 308 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~ 308 (334)
.+++.++.+|+++|++++++ ++++|++++++|++|.+.|+++|.++|++||++||+||+|+.+.+.. .
T Consensus 117 ~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~---~------ 184 (386)
T 1cs1_A 117 YRVLFVDQGDEQALRAALAE---KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN---P------ 184 (386)
T ss_dssp CEEEEECTTCHHHHHHHHHT---CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---G------
T ss_pred CEEEEeCCCCHHHHHHhhcc---CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---c------
Confidence 88999999999999999975 68899999999999999999999999999999999999999765421 1
Q ss_pred CCCCccEEEecCcccccCC----ccEEeeC
Q 019931 309 CERDVDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+..++|+++.|+||++|+. ||+++++
T Consensus 185 ~~~~~di~~~s~sK~~~~~~~~~~G~~~~~ 214 (386)
T 1cs1_A 185 LALGADLVLHSCTKYLNGHSDVVAGVVIAK 214 (386)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEES
T ss_pred cccCceEEEEcCcccccCCCCceeEEEEeC
Confidence 1234689999999999753 3887763
No 115
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.84 E-value=7.8e-20 Score=173.90 Aligned_cols=198 Identities=14% Similarity=0.034 Sum_probs=142.7
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~ 183 (334)
.+|++++||++++ ..+..+|.+++++.+.-.....+ +. ....+++++++++++.+ .++++++|++|+..++.
T Consensus 21 ~~~~~~idl~~~~-~~~~~~~~v~~a~~~~~~~~~~y----~~-~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~ 94 (364)
T 1lc5_A 21 ISPDQLLDFSANI-NPLGMPVSVKRALIDNLDCIERY----PD-ADYFHLHQALARHHQVPASWILAGNGETESIFTVAS 94 (364)
T ss_dssp SCGGGSEECSSCC-CTTCCCHHHHHHHHHTGGGGGSC----CC-TTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHH
T ss_pred CCccceEEecccc-CCCCCCHHHHHHHHHHHHHhhcC----CC-CCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHH
Confidence 3458899999987 45667899999887643211111 11 22478999999999864 67888899999999998
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCC---HHHHHHHHhcCCCCcEEEEEcC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCD---MSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D---~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
++ + +|.|++..+.|......++.. |.+++.++.+. ++.++++++...+++++|++.+
T Consensus 95 ~~--~--------------gd~vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~ 154 (364)
T 1lc5_A 95 GL--K--------------PRRAMIVTPGFAEYGRALAQS----GCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCT 154 (364)
T ss_dssp HH--C--------------CSEEEEEESCCTHHHHHHHHT----TCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEES
T ss_pred Hc--C--------------CCeEEEeCCCcHHHHHHHHHc----CCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeC
Confidence 77 4 466777777777777777665 78888887642 1112333333324678888888
Q ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEe
Q 019931 261 LFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 261 v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
++||+|.+.| +++|+++|++||++||+||+|+.+.++ +.......+. .+.++++.||||+||..| ||++
T Consensus 155 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~ 229 (364)
T 1lc5_A 155 PNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH--ETGFIPALKD-NPHIWVLRSLTKFYAIPGLRLGYLV 229 (364)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT--CCCSGGGCTT-CTTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccC--ccchhhHhcc-CCCEEEEEECchhhcCCccceEEEE
Confidence 9999999998 899999999999999999999975543 3333332222 345799999999998666 8887
No 116
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.84 E-value=5.2e-20 Score=177.02 Aligned_cols=200 Identities=13% Similarity=0.025 Sum_probs=145.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC---CCCccccccC--chHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM---GPRGSALICG--YTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g~~~sr~~~G--~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
..|+|+.++. ..+|.+++++.++-. +...+.+.+| ..+...++++++++++|.+ .++++++|++++..+
T Consensus 27 ~~~ld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~ 102 (406)
T 3cai_A 27 WVHFDAPAGM----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLL 102 (406)
T ss_dssp CEECBGGGCC----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHH
T ss_pred eEEEeCCCcC----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHH
Confidence 5677777665 468999997765421 1111122221 2467799999999999975 577778889998888
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~l 255 (334)
+.++.+. + .+||.|++....|.+....+.......|.+++.++.+ |+++|++++++ ++++
T Consensus 103 ~~~l~~~---~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~---~~~~ 168 (406)
T 3cai_A 103 AEASSSR---A--------GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISK---STRL 168 (406)
T ss_dssp HHHTGGG---G--------BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCCT---TEEE
T ss_pred HHHHhhc---c--------CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhCC---CceE
Confidence 8876211 0 1378888888888887666554211117888888765 89999998864 7899
Q ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCcc-EEeeC
Q 019931 256 VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQGG-FIACR 334 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~GG-~i~~~ 334 (334)
|++++++|++|.+.|+++|.++|+++|++||+|++|+.|.... .+ ..+ ++|+++.|++|.+|+.+| +++++
T Consensus 169 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~---~~-~~~----~~d~~~~s~~K~~g~~~G~~~~~~ 240 (406)
T 3cai_A 169 VAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLL---DI-RET----DADVVTVNAHAWGGPPIGAMVFRD 240 (406)
T ss_dssp EEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCC---CH-HHH----CCSEEEEEGGGGTSCSCEEEEESC
T ss_pred EEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCC---Cc-hhc----CCCEEEeehhhhcCCCcCeEEEEe
Confidence 9999999999999999999999999999999999998653211 11 111 368999999999987667 88753
No 117
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.84 E-value=4.4e-21 Score=188.91 Aligned_cols=196 Identities=14% Similarity=0.180 Sum_probs=149.4
Q ss_pred eecCccCCCCCCHHHHHHHHHhcCCCCccccccCc---hHHHHHHHHHHHhHhCCCcEEE---eccHHHHHHHHHHHHhh
Q 019931 114 FSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGY---TNYHRLLESCLADLKKKEDCLL---CPTGFAANMAVIVAVGN 187 (334)
Q Consensus 114 f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~---~~~~~~LE~~La~~~g~e~alv---~~sG~~An~~ai~al~~ 187 (334)
|...+.+...++++|.+++++...+........|+ ...+++||+.+++++|.+.+++ ++||++||..++.++++
T Consensus 26 ~~~~~~~~~~n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~ 105 (431)
T 3ht4_A 26 HKRADEVIESNQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILR 105 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCC
Confidence 55566666666889999888765443222222222 2567899999999999998877 89999999999988876
Q ss_pred hhhhccCCCccCCCCCeEEEEcC-CCchhhHHHHHHh------hhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEE
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDA-LNHASIIDGIRIA------ERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~-~~H~s~~~g~~ls------~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~l 255 (334)
+ ||.|+++. ..|.++...+.++ ....|++++.++++ |+++|++++++ ++++
T Consensus 106 ~--------------Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~---~tk~ 168 (431)
T 3ht4_A 106 P--------------GDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS---NTKM 168 (431)
T ss_dssp T--------------TCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT---TEEE
T ss_pred C--------------CCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC---CCeE
Confidence 4 78888877 8888887766431 01127889999874 99999999864 7899
Q ss_pred EEEcC----CCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc----
Q 019931 256 VVTDS----LFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG---- 325 (334)
Q Consensus 256 Vv~e~----v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G---- 325 (334)
|++++ ++++.|.+.|+++|+++|++ +|++||+|++|+.++++.. . ...++|++++||+|++|
T Consensus 169 V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~--~------~~~g~Di~~~S~sK~lgg~~~ 240 (431)
T 3ht4_A 169 IGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE--P------CHVGADLMAGSLIKNPGGGIV 240 (431)
T ss_dssp EEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC--G------GGTTCSEEEEETTSGGGTTTC
T ss_pred EEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC--c------cccCCeEEEcCccccCCCCCC
Confidence 99997 77778888899999999999 9999999999998764321 1 11246899999999975
Q ss_pred CCccEEeeC
Q 019931 326 CQGGFIACR 334 (334)
Q Consensus 326 ~~GG~i~~~ 334 (334)
..||+++++
T Consensus 241 ~~GG~v~~~ 249 (431)
T 3ht4_A 241 KTGGYIVGK 249 (431)
T ss_dssp SSCEEEEEC
T ss_pred CceEEEEec
Confidence 468999874
No 118
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.84 E-value=2e-21 Score=205.32 Aligned_cols=219 Identities=10% Similarity=0.007 Sum_probs=151.4
Q ss_pred hhcccce----eEEEeec---CccCCCCCCHHHHHHHHH----hcCCCCccccccCchHHHHHHHHHHHhHhC---CCcE
Q 019931 103 TFARQFK----RLLLFSG---NDYLGLSSHPTIAKAAAR----HGMGPRGSALICGYTNYHRLLESCLADLKK---KEDC 168 (334)
Q Consensus 103 ~~~~~g~----~~l~f~s---n~yLgl~~~p~v~~a~~~----~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~e~a 168 (334)
.+|.+|+ +||||+| +.++|++.||+|++|+++ ++... +....++...+|+++|+++.+ .+++
T Consensus 370 l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~----~~~~~~~~~~~Lae~L~~~~p~~~l~~v 445 (831)
T 4a0g_A 370 IYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVM----FPENVYEPALKCAELLLDGVGKGWASRV 445 (831)
T ss_dssp EEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCC----CTTEECHHHHHHHHHHHHTTTTTTCCEE
T ss_pred EEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhccccc----ccccCCHHHHHHHHHHHHhCCCCCCCEE
Confidence 4567788 9999988 477888659999997743 33211 112246778899999999987 4688
Q ss_pred EEeccHHHHHHHHHHHHhhhhhhccCCCc-----cCCCCCeEEEEcCCCchhhHHHHHHhhhc---C--------CcE--
Q 019931 169 LLCPTGFAANMAVIVAVGNIASLLAGDEK-----SFKDEKIAIFSDALNHASIIDGIRIAERT---K--------MVE-- 230 (334)
Q Consensus 169 lv~~sG~~An~~ai~al~~~~~~~~~~~~-----~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---~--------g~~-- 230 (334)
++++||++||..+|+...+.-. ...+.. +..++..+|..+..+|+.+..++.++... . +..
T Consensus 446 ff~~SGSeA~E~AlK~A~r~~~-~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~ 524 (831)
T 4a0g_A 446 YFSDNGSTAIEIALKMAFRKFC-VDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLF 524 (831)
T ss_dssp EEESSHHHHHHHHHHHHHHHHH-HTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEE
T ss_pred EECCChhHHHHHHHHHHHHHHH-hhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccc
Confidence 9999999999999997633200 000100 00124578889999999999888775310 0 000
Q ss_pred -------------EEEee------------CCCH------------------HHHHHHHhc-----CCCCcEEEEEcCC-
Q 019931 231 -------------VFVYK------------HCDM------------------SHLKTLLSC-----CTMRKKVVVTDSL- 261 (334)
Q Consensus 231 -------------v~~~~------------~~D~------------------~~Le~~l~~-----~~~~~~lVv~e~v- 261 (334)
.+.++ ++|+ ++||++|++ ...++++|++|++
T Consensus 525 ~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvv 604 (831)
T 4a0g_A 525 LDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVI 604 (831)
T ss_dssp ECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSE
T ss_pred cCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEeccc
Confidence 11122 2232 567777763 1246789999998
Q ss_pred CCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEEecCcccccCCc----cEEe
Q 019931 262 FSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICVGTLSKAAGCQG----GFIA 332 (334)
Q Consensus 262 ~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~~SlsKa~G~~G----G~i~ 332 (334)
++..|.+.| |++|+++|++||++||+||+|+. +|++|..++ +++++.|+ |+ ||+|++|+ | |+++
T Consensus 605 qg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tG--fGRtG~~fa~e~~gv~PD--ii--tlsK~L~g-G~~Plgav~ 677 (831)
T 4a0g_A 605 HGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTG--FWRLGVETTTELLGCKPD--IA--CFAKLLTG-GMVPLAVTL 677 (831)
T ss_dssp ETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTT--TTTTSBSSTHHHHSSCCS--EE--EECGGGGT-TSSCCEEEE
T ss_pred ccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccc--cccCCCchhhHhcCCCCc--EE--EEeccccc-CccCcEEEE
Confidence 788887765 99999999999999999999984 788887764 78898874 54 89999975 3 5565
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
+
T Consensus 678 ~ 678 (831)
T 4a0g_A 678 A 678 (831)
T ss_dssp E
T ss_pred E
Confidence 5
No 119
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.84 E-value=6.8e-20 Score=174.80 Aligned_cols=196 Identities=11% Similarity=0.035 Sum_probs=142.0
Q ss_pred EEeecCccCCCCCCHHHHHHHHHhc-CC-CCccccccCchHHHHHHHHHHHhH------hCC--CcEEEeccHHHHHHHH
Q 019931 112 LLFSGNDYLGLSSHPTIAKAAARHG-MG-PRGSALICGYTNYHRLLESCLADL------KKK--EDCLLCPTGFAANMAV 181 (334)
Q Consensus 112 l~f~sn~yLgl~~~p~v~~a~~~~g-~g-~~~sr~~~G~~~~~~~LE~~La~~------~g~--e~alv~~sG~~An~~a 181 (334)
|||++|++ .+..+|.+++++.+.- .+ ....+ ++.... .+++++++++ .+. +.+++++++++|+..+
T Consensus 33 idl~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~--y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~ 108 (369)
T 3cq5_A 33 IRLNTNEN-PYPPSEALVADLVATVDKIATELNR--YPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQL 108 (369)
T ss_dssp EECSSCCC-CSCCCHHHHHHHHHHHHHHGGGTTS--CCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHH
T ss_pred eeccCCCC-CCCCCHHHHHHHHHHHHhccccccc--CCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHH
Confidence 89999987 6778999999765431 10 00111 111112 5788888887 343 4567777778899899
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lV 256 (334)
+.++.++ ||.|++..+.|.++...++.. |.+++.++++ |+++|++++++. ++++|
T Consensus 109 ~~~l~~~--------------gd~Vl~~~~~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~v 168 (369)
T 3cq5_A 109 LQAFGGP--------------GRTALGFQPSYSMHPILAKGT----HTEFIAVSRGADFRIDMDVALEEIRAK--QPDIV 168 (369)
T ss_dssp HHHHCST--------------TCEEEEEESSCTHHHHHHHHT----TCEEEEEECCTTSSCCHHHHHHHHHHH--CCSEE
T ss_pred HHHhcCC--------------CCEEEEcCCChHHHHHHHHHc----CCEEEEecCCcCCCCCHHHHHHHhhcc--CCCEE
Confidence 9888654 788888888888888777766 7888888753 789999988742 56788
Q ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEee
Q 019931 257 VTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 257 v~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
++++++||+|.+.|+++|.++|+.+++++|+||+|+.+..+ .......+..++.+++++||||+||..| ||+++
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 245 (369)
T 3cq5_A 169 FVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA 245 (369)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEE
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEe
Confidence 88999999999999999999999999999999999975432 1111111111215699999999998666 88876
Q ss_pred C
Q 019931 334 R 334 (334)
Q Consensus 334 ~ 334 (334)
+
T Consensus 246 ~ 246 (369)
T 3cq5_A 246 N 246 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 120
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.84 E-value=4.1e-20 Score=180.08 Aligned_cols=157 Identities=15% Similarity=0.175 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHh-hhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIA-ERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls-~~~~ 227 (334)
.+...+||++|+++.|.+.+++++||++|+.+ +.+++++ ||.|++....|......+... ....
T Consensus 66 ~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~~~--------------gd~Vi~~~~~y~~~~~~~~~~~~~~~ 130 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELLDA--------------GSHVVAMDDLYGGTFRLFERVRRRTA 130 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTSCT--------------TCEEEEESSCCHHHHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHcCC--------------CCEEEEeCCCchHHHHHHHHhhHhhc
Confidence 57789999999999999999999999999887 4445543 777777777776555443321 1112
Q ss_pred CcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccccccc
Q 019931 228 MVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
+.+++.++.+|+++|++++++ ++++|++++++|++|.+.|+++|+++|++||++||+|++|+.+.+..
T Consensus 131 g~~~~~v~~~d~~~l~~~i~~---~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~--------- 198 (400)
T 3nmy_A 131 GLDFSFVDLTDPAAFKAAIRA---DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR--------- 198 (400)
T ss_dssp CCEEEEECTTSHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---------
T ss_pred CeEEEEECCCCHHHHHHHhcc---CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC---------
Confidence 889999999999999999864 78999999999999999999999999999999999999998765421
Q ss_pred CCCCCccEEEecCcccccC----Ccc-EEe
Q 019931 308 NCERDVDICVGTLSKAAGC----QGG-FIA 332 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~----~GG-~i~ 332 (334)
.+..++|+++.|++|++|+ .|| +++
T Consensus 199 ~~~~g~div~~S~sK~l~g~g~~~gG~~vv 228 (400)
T 3nmy_A 199 PLSLGADLVVHSATKYLNGHSDMVGGIAVV 228 (400)
T ss_dssp GGGGTCSEEEEETTTTTTCSSSCCCEEEEE
T ss_pred hhhcCCcEEEecCccccCCCCCcceeEEEE
Confidence 1112578999999999984 467 444
No 121
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.84 E-value=2.4e-20 Score=174.96 Aligned_cols=155 Identities=19% Similarity=0.192 Sum_probs=127.9
Q ss_pred HHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEE
Q 019931 154 LLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFV 233 (334)
Q Consensus 154 ~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~ 233 (334)
+||+++++++|.++++++++|++|+..++.++.++ ||.|++..+.|.+....+.......+.+++.
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~--------------g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 67 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKA--------------GDHLISDDCLYGCTHALFEHQLRKFGVEVDF 67 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEESCCCHHHHHHHHTHHHHTTCEEEE
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCC--------------CCEEEEcCCCcchHHHHHHHHHHhcCCEEEE
Confidence 68999999999999999999999999999987654 7778888888888776654211112789999
Q ss_pred eeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHH-cCCEEEEecCcccccccCCCcccccccCCCCC
Q 019931 234 YKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRK-YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD 312 (334)
Q Consensus 234 ~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k-~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~ 312 (334)
++..|+++|++.+++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++|+.|.+.. .. ..+
T Consensus 68 ~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~---~~------~~~ 135 (331)
T 1pff_A 68 IDMAVPGNIEKHLKP---NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN---PL------DLG 135 (331)
T ss_dssp ECTTSTTHHHHTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC---GG------GGT
T ss_pred eCCCCHHHHHHhhcC---CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC---hh------hcC
Confidence 999999999998863 78999999999999999999999999999 999999999999875421 11 234
Q ss_pred ccEEEecCcccccCC----ccEEeeC
Q 019931 313 VDICVGTLSKAAGCQ----GGFIACR 334 (334)
Q Consensus 313 ~Div~~SlsKa~G~~----GG~i~~~ 334 (334)
+|+++.|+||+||+. +|+++++
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~ 161 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSR 161 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEEC
T ss_pred CcEEEEECccccCCCCCceEEEEEeC
Confidence 689999999999763 6788764
No 122
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.83 E-value=6.8e-20 Score=178.39 Aligned_cols=158 Identities=15% Similarity=0.137 Sum_probs=129.6
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+...+||++|++++|.+++++++||++|+..++. ++++ ||.|++....|.+....+.......|
T Consensus 66 ~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~~~--------------gd~Vl~~~~~y~~~~~~~~~~~~~~G 130 (403)
T 3cog_A 66 NPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LLKA--------------GDQIICMDDVYGGTNRYFRQVASEFG 130 (403)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TSCT--------------TCEEEEESSCCHHHHHHHHHTGGGGT
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCC--------------CCEEEEeCCCcchHHHHHHHHHHHcC
Confidence 36679999999999999899999999999999888 6654 77788877888776555432212238
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC-CEEEEecCcccccccCCCccccccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG-FLLVLDDAHGTFVCGKNGGGVAEQF 307 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g-a~LivDeAh~~Gv~G~~G~g~~~~~ 307 (334)
.+++.++.+|+++|++++++ ++++|++++++||+|.+.|+++|.++|+++| ++||+|++|+.+.+..
T Consensus 131 ~~v~~v~~~d~~~l~~~i~~---~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~--------- 198 (403)
T 3cog_A 131 LKISFVDCSKIKLLEAAITP---ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR--------- 198 (403)
T ss_dssp CEEEEECTTSHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC---------
T ss_pred CEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC---------
Confidence 89999999999999998864 7899999999999999999999999999999 9999999999875421
Q ss_pred CCCCCccEEEecCcccccCC----ccEEee
Q 019931 308 NCERDVDICVGTLSKAAGCQ----GGFIAC 333 (334)
Q Consensus 308 ~~~~~~Div~~SlsKa~G~~----GG~i~~ 333 (334)
.+..++||++.|+||.||+. +|++++
T Consensus 199 ~~~~~~div~~S~sK~~~g~~~~~~G~v~~ 228 (403)
T 3cog_A 199 PLALGADISMYSATKYMNGHSDVVMGLVSV 228 (403)
T ss_dssp TTTTTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred ccccCCeEEEEcChhhccCCCCCeEEEEEE
Confidence 11235789999999999863 488876
No 123
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.83 E-value=4.4e-20 Score=176.95 Aligned_cols=206 Identities=16% Similarity=0.071 Sum_probs=144.2
Q ss_pred ceeEEEeecCccCCCC----CCHHHHHHHHHhc-C-CCCccccccCchHHHHHHHHHHHhHh---C-----CCcEEE--e
Q 019931 108 FKRLLLFSGNDYLGLS----SHPTIAKAAARHG-M-GPRGSALICGYTNYHRLLESCLADLK---K-----KEDCLL--C 171 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~----~~p~v~~a~~~~g-~-g~~~sr~~~G~~~~~~~LE~~La~~~---g-----~e~alv--~ 171 (334)
+++++||++++|++.. .+|.+++++.+.- . ...++....| ..+|++++++++ + .+++++ +
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~~la~~~~~~~~~~~~~~~v~~~~~ 100 (396)
T 2q7w_A 25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDG----IPEFGRCTQELLFGKGSALINDKRARTAQT 100 (396)
T ss_dssp ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTC----CHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCC----CHHHHHHHHHHHhcCCCCccccccEEEEec
Confidence 4678999999987653 4689999876541 1 1111212222 366777777776 2 356777 8
Q ss_pred ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---C----CHHHHHH
Q 019931 172 PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---C----DMSHLKT 244 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---~----D~~~Le~ 244 (334)
++|++|+..++.++..- .+||.|++..+.|......++.. |.+++.++. + |+++|++
T Consensus 101 ~g~~~a~~~~~~~~~~~------------~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~ 164 (396)
T 2q7w_A 101 PGGTGALRVAADFLAKN------------TSVKRVWVSNPSWPNHKSVFNSA----GLEVREYAYYDAENHTLDFDALIN 164 (396)
T ss_dssp SHHHHHHHHHHHHHHHH------------SCCCEEEEEESCCTHHHHHHHHT----TCEEEEEECEETTTTEECHHHHHH
T ss_pred ccchhhHHHHHHHHHHh------------CCCCEEEEcCCCchhHHHHHHHc----CCceEEEecccCCCCCcCHHHHHH
Confidence 99999999998876431 13777888888888887777766 788888876 3 8999999
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecC
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTL 320 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~Sl 320 (334)
++++.++++++|++.+++||+|.+.| +++|+++|++||++||+||+|+...++....+. ...+...++.+|+++||
T Consensus 165 ~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 244 (396)
T 2q7w_A 165 SLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSY 244 (396)
T ss_dssp HHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEEC
T ss_pred HHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEec
Confidence 99754335788999999999999876 667999999999999999999865443100111 11122123346889999
Q ss_pred cccccCCc---cEEee
Q 019931 321 SKAAGCQG---GFIAC 333 (334)
Q Consensus 321 sKa~G~~G---G~i~~ 333 (334)
||+||+.| ||+++
T Consensus 245 sK~~~~~G~riG~~~~ 260 (396)
T 2q7w_A 245 SXNFGLYNERVGACTL 260 (396)
T ss_dssp TTTTTCGGGCCEEEEE
T ss_pred cccccccccccceEEE
Confidence 99999767 88764
No 124
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.83 E-value=6.6e-20 Score=177.27 Aligned_cols=203 Identities=14% Similarity=0.074 Sum_probs=146.8
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHh-CCC-------cE--EEeccHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLK-KKE-------DC--LLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~-g~e-------~a--lv~~sG~~A 177 (334)
.++|||++++|+++..+|.+.+++++... +..++....|. .+|++++++++ |.+ .+ +.+++|+.|
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga 116 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGI----ASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGA 116 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCC----HHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHH
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCc----HHHHHHHHHHHcCCCchhhccCceeeeecccchHH
Confidence 57899999999999999999998877621 22222223333 56778888865 432 34 347888888
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~ 250 (334)
+..+...+.. ..++||.|+++.+.|.++...++.. |.+++.++. .|+++|++.+++.+
T Consensus 117 ~~~~~~~~~~-----------~~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 181 (409)
T 4eu1_A 117 LRIGGDLLNR-----------FVANCNRIYGPDVGYPNHESIFAKA----GMELTPYSYYDPATKGLNLAGMLECLDKAP 181 (409)
T ss_dssp HHHHHHHGGG-----------TSSSCCEEEEESSCCTHHHHHHHHT----TCEEEEECCEETTTTEECHHHHHHHHHHSC
T ss_pred HHHHHHHHHH-----------hcCCCCEEEEeCCCcHhHHHHHHHc----CCeEEEEEeecCcCCcCcHHHHHHHHHhCC
Confidence 8776543321 1124789999999999988888877 888888875 28999999997543
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccC---CCcccccccCCCCCccEEEecCcccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGK---NGGGVAEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~---~G~g~~~~~~~~~~~Div~~SlsKa~ 324 (334)
.+++++++++++||+|.+.+ +++|+++|++||+++|+||+|+...++. .+.++....+..++ .|+++||||+|
T Consensus 182 ~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~ 260 (409)
T 4eu1_A 182 EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPN-LIVAQSFSKNF 260 (409)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSC-CEEEEECTTTS
T ss_pred CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCc-EEEEecCcccc
Confidence 46778888999999999888 5569999999999999999998765543 11222222233333 48899999999
Q ss_pred cCCc---cEE
Q 019931 325 GCQG---GFI 331 (334)
Q Consensus 325 G~~G---G~i 331 (334)
|+.| ||+
T Consensus 261 g~~G~riG~~ 270 (409)
T 4eu1_A 261 GLYGHRCGAL 270 (409)
T ss_dssp SCGGGCCEEE
T ss_pred cCccCCceEE
Confidence 9877 885
No 125
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=4.8e-20 Score=178.81 Aligned_cols=157 Identities=17% Similarity=0.103 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
.+..+++|++|++++|.+++++|+||++|+..++. ++++ ||.|++....|.+....+.......|
T Consensus 54 ~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~~~--------------gd~Vi~~~~~y~~~~~~~~~~~~~~G 118 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SLPQ--------------GSHAVSIGDVYGGTHRYFTKVANAHG 118 (393)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TSCS--------------SCEEEEESSCCHHHHHHHHHTSTTTC
T ss_pred ChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-HcCC--------------CCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 46679999999999999899999999999999998 7654 67777777777766554432212237
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc----CCEEEEecCcccccccCCCcccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY----GFLLVLDDAHGTFVCGKNGGGVA 304 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~----ga~LivDeAh~~Gv~G~~G~g~~ 304 (334)
.+++.++.+| ++|++++++ ++++|++++++|++|.+.|+++|.++|+++ |++||+|++|+.+.+. . .
T Consensus 119 ~~v~~v~~~d-~~l~~~i~~---~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~---~-~- 189 (393)
T 1n8p_A 119 VETSFTNDLL-NDLPQLIKE---NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS---N-P- 189 (393)
T ss_dssp SCCEEESSHH-HHHHHHSCS---SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC---C-G-
T ss_pred cEEEEeCCCh-HHHHHhccc---CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC---C-H-
Confidence 8888888878 899988864 789999999999999999999999999999 9999999999987542 1 1
Q ss_pred cccCCCCCccEEEecCcccccCCc----cEEee
Q 019931 305 EQFNCERDVDICVGTLSKAAGCQG----GFIAC 333 (334)
Q Consensus 305 ~~~~~~~~~Div~~SlsKa~G~~G----G~i~~ 333 (334)
.. .++||++.|+||.+|+.| |++++
T Consensus 190 --~~--~~~di~~~S~sK~~g~~G~rigG~~~~ 218 (393)
T 1n8p_A 190 --LN--FGADIVVHSATKYINGHSDVVLGVLAT 218 (393)
T ss_dssp --GG--GTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred --HH--cCCeEEEEECcccccCCCCceeEEEEe
Confidence 11 147899999999999754 88876
No 126
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.83 E-value=1.1e-19 Score=176.01 Aligned_cols=206 Identities=11% Similarity=0.040 Sum_probs=145.8
Q ss_pred ceeEEEeecCccC----CCCCCHHHHHHHHHhcC-CCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHH
Q 019931 108 FKRLLLFSGNDYL----GLSSHPTIAKAAARHGM-GPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANM 179 (334)
Q Consensus 108 g~~~l~f~sn~yL----gl~~~p~v~~a~~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~ 179 (334)
|++++||+.++|+ .+..+|.+++++++... +..++....|...+.+++.+.+....+.+ .++++++|++|+.
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~ 116 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIH 116 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHH
Confidence 4689999999874 44457788887765432 11223334555555566666665555666 7888999999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcC--CC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCC--TM 251 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~--~~ 251 (334)
.++.+++++ ||.|++..+.|..+...++.. |.+++.++. .|+++|++.+++. ++
T Consensus 117 ~~~~~l~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~ 178 (418)
T 3rq1_A 117 HLIHNYTEP--------------GDEVLTADWYWGAYRVICSDT----GRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ 178 (418)
T ss_dssp HHHHHHSCT--------------TCEEEEESSCCTHHHHHHHHT----TCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCC--------------CCEEEECCCCchhHHHHHHHc----CCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC
Confidence 999988764 788888888888888887776 888888874 3789999998742 11
Q ss_pred CcEEEEEcCC-CCCCCCccCHHH---HHHHHH------HcCCEEEEecCcccccccCCCc---cccccc-CCCCCc-cEE
Q 019931 252 RKKVVVTDSL-FSMDGDFAPMVE---LVKLRR------KYGFLLVLDDAHGTFVCGKNGG---GVAEQF-NCERDV-DIC 316 (334)
Q Consensus 252 ~~~lVv~e~v-~n~~G~~~pL~~---L~ela~------k~ga~LivDeAh~~Gv~G~~G~---g~~~~~-~~~~~~-Div 316 (334)
.+++|+++++ +||+|.+.|.++ |+++|+ +||++||+||+|... +.+|. .+...+ ++.++. .|+
T Consensus 179 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~--~~~~~~~~~~~~~~~~~~~~~~~i~ 256 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDY--SGEKDEVRAFFNKFSHLPKEILTCV 256 (418)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGG--SSCHHHHHGGGGGGTTCCTTEEEEE
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccc--cCChHHHHHHHHHHHhcCCCceEEE
Confidence 3448889988 999999998555 555565 899999999999743 33332 122222 222221 278
Q ss_pred EecCcccccCCc---cEEee
Q 019931 317 VGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 317 ~~SlsKa~G~~G---G~i~~ 333 (334)
++||||+||+.| ||+++
T Consensus 257 ~~S~sK~~~~~G~r~G~~~~ 276 (418)
T 3rq1_A 257 CYSLSKGFTMYGQRVGAMIG 276 (418)
T ss_dssp EEESTTTTTCCSSCCEEEEE
T ss_pred EEeCCCCCcCcCCcceEEEE
Confidence 899999998776 88876
No 127
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.83 E-value=1.8e-19 Score=180.07 Aligned_cols=209 Identities=13% Similarity=0.072 Sum_probs=149.1
Q ss_pred EEeecCccCCCC--CCHHHHH----HHHHhcCC-CCccccccCchHHHHHHHHHHHhHhCCC----cE--EEeccHHHHH
Q 019931 112 LLFSGNDYLGLS--SHPTIAK----AAARHGMG-PRGSALICGYTNYHRLLESCLADLKKKE----DC--LLCPTGFAAN 178 (334)
Q Consensus 112 l~f~sn~yLgl~--~~p~v~~----a~~~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~e----~a--lv~~sG~~An 178 (334)
++|.++.|+|.. .++.+.+ ++.++... ...+....+...+..++.+.+++++|.+ .+ +++++|++||
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~ 173 (514)
T 3mad_A 94 PAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL 173 (514)
T ss_dssp HHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHH
T ss_pred CCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHH
Confidence 467778888853 5566555 33333222 1222222333455566777778999865 55 8889999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCc
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~ 253 (334)
..+++++..++.--. + ..+|.|++....|.++...++.. |.+++.++.+ |+++|++++++ ++
T Consensus 174 ~~al~a~~~~g~~~~-g-----~~~d~Vi~~~~~~~~~~~~~~~~----G~~v~~v~~~~~~~~d~~~Le~~i~~---~~ 240 (514)
T 3mad_A 174 LLAMKTYRDWARATK-G-----ITAPEAVVPVSAHAAFDKAAQYF----GIKLVRTPLDADYRADVAAMREAITP---NT 240 (514)
T ss_dssp HHHHHHHHHHHHHHH-C-----CSSCEEEEETTSCTHHHHHHHHH----TCEEEEECBCTTSCBCHHHHHHHCCT---TE
T ss_pred HHHHHHHHHHhhhhc-C-----CCCCeEEEeCccchHHHHHHHHc----CCeeEEeeeCCCCCCCHHHHHHHhcc---CC
Confidence 999999876521000 0 01378999999999999888887 8888888865 89999999874 78
Q ss_pred EEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc---cCCCcccccccCCCCCccEEEecCcccc-cCCc-
Q 019931 254 KVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC---GKNGGGVAEQFNCERDVDICVGTLSKAA-GCQG- 328 (334)
Q Consensus 254 ~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~---G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~G- 328 (334)
++|++++++|++|.+.|+++|.++|++||++||+|++|+.+++ +..|...........++|+++.|++|.+ ++.|
T Consensus 241 ~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~ 320 (514)
T 3mad_A 241 VVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGT 320 (514)
T ss_dssp EEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSC
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCe
Confidence 9999999999999999999999999999999999999997654 2233321111112356799999999995 4433
Q ss_pred cEEee
Q 019931 329 GFIAC 333 (334)
Q Consensus 329 G~i~~ 333 (334)
|++++
T Consensus 321 g~~~~ 325 (514)
T 3mad_A 321 SVILY 325 (514)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 56543
No 128
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.83 E-value=1.3e-19 Score=172.50 Aligned_cols=179 Identities=15% Similarity=0.102 Sum_probs=138.7
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--c-EEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--D-CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~-alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
.+|.+++++.++.... + .....+..+++++.+++++|.+ + ++++++|++|+..++.+++++
T Consensus 31 ~~~~v~~a~~~~~~~~--~--~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~------------ 94 (386)
T 2dr1_A 31 CFPEVLEIMKVQMFSH--R--SKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSK------------ 94 (386)
T ss_dssp CCHHHHHHTTSCCCCT--T--SHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCT------------
T ss_pred CcHHHHHHHhcccccc--c--CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcC------------
Confidence 4788888887654321 1 1112577899999999999976 4 667799999999999988654
Q ss_pred CCCeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++..+.|.+ +...++.. |++++.++. .|+++|++++++. +++++|++++++|++|.+.|+++
T Consensus 95 --gd~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~l~~ 167 (386)
T 2dr1_A 95 --GGKVLVTIIGAFGKRYKEVVESN----GRKAVVLEYEPGKAVKPEDLDDALRKN-PDVEAVTITYNETSTGVLNPLPE 167 (386)
T ss_dssp --TCEEEEEESSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECCHHH
T ss_pred --CCeEEEEcCCchhHHHHHHHHHh----CCceEEEecCCCCCCCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCCHHH
Confidence 7788888788876 55555554 788888876 5899999999642 26789998999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCC-c-cEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQ-G-GFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~-G-G~i~~~ 334 (334)
|.++|++||++||+|++|+.|.+. .++. .++|+++.|+||+|++. | |+++++
T Consensus 168 i~~l~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~ 222 (386)
T 2dr1_A 168 LAKVAKEHDKLVFVDAVSAMGGAD---------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFS 222 (386)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBC---------CCTTTTTCSEEEEETTSTTCCCSSCEEEEEC
T ss_pred HHHHHHHcCCeEEEEccccccCcc---------ccccccCCcEEEEeccccccCCCceEEEEEC
Confidence 999999999999999999976432 1111 24689999999999864 4 787764
No 129
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.83 E-value=4.4e-20 Score=176.20 Aligned_cols=173 Identities=15% Similarity=0.125 Sum_probs=135.8
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCC
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEK 203 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~g 203 (334)
+|++++++.+.-... .++..+...++|+++++++|.+++++++||++|+..++.++ .+ +|
T Consensus 16 ~~~~~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~--------------~g 76 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN-----WFILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIG--------------FG 76 (373)
T ss_dssp HHHHHHHHHHHHHHT-----CCSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCC--------------TT
T ss_pred CHHHHHHHHHHHHCC-----CccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCC--------------Cc
Confidence 356666655432110 12345788999999999999999999999999999999987 54 37
Q ss_pred eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHH
Q 019931 204 IAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKL 277 (334)
Q Consensus 204 d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~el 277 (334)
|.|+++.+.|.++...++.. |++++.++.+ |+++|++++++ ++++|+ ++|++|.+.|+++|.++
T Consensus 77 d~Vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~---~~n~~G~~~~l~~i~~l 146 (373)
T 3frk_A 77 DEVIVPSNTFIATALAVSYT----GAKPIFVEPDIRTYNIDPSLIESAITE---KTKAII---AVHLYGQPADMDEIKRI 146 (373)
T ss_dssp CEEEEETTSCTHHHHHHHHH----SCEEEEECEETTTTEECGGGTGGGCCT---TEEEEE---EECCTTCCCCHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHc----CCEEEEEeccccccCcCHHHHHHhcCC---CCeEEE---EECCCcCcccHHHHHHH
Confidence 88999999999998888777 8888888765 88999888764 678887 56789999999999999
Q ss_pred HHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--ccccC--CccEEee
Q 019931 278 RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAGC--QGGFIAC 333 (334)
Q Consensus 278 a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G~--~GG~i~~ 333 (334)
|++||++||+|++|+.|.. ..+. ..+. ..|+++.||+ |.+|+ .||++++
T Consensus 147 ~~~~~~~li~D~a~~~g~~-~~~~----~~~~--~~d~~~~S~~~~K~l~~~g~gg~~~~ 199 (373)
T 3frk_A 147 AKKYNLKLIEDAAQAHGSL-YKGM----KVGS--LGDAAGFSFYPAKNLGSLGDGGAVVT 199 (373)
T ss_dssp HHHHTCEEEEECTTCTTCE-ETTE----ETTS--SSSEEEEECCTTSSSCCSSSCEEEEE
T ss_pred HHHcCCEEEEECCcccCCE-ECCE----eccc--cccEEEEeCcCCCccCccceeEEEEe
Confidence 9999999999999998754 2221 1221 1478999977 99976 5788876
No 130
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.83 E-value=3.8e-19 Score=170.51 Aligned_cols=205 Identities=14% Similarity=0.081 Sum_probs=145.8
Q ss_pred eeEEEeecCccCCCC----CCHHHHHHHHH-hcC--CCCccccccCchHHHHHHHHHHHhHhC----CC--cEEEeccHH
Q 019931 109 KRLLLFSGNDYLGLS----SHPTIAKAAAR-HGM--GPRGSALICGYTNYHRLLESCLADLKK----KE--DCLLCPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~----~~p~v~~a~~~-~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g----~e--~alv~~sG~ 175 (334)
..++||+.+.|+.-. .+|.|++++.+ .-. +..++....|..++.+++.+.+....+ .+ .++++++|+
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~ 105 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGS 105 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcH
Confidence 468999999655332 23889998876 432 223344445555555555555544333 34 567888999
Q ss_pred HHHHHHHH--HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----C---CHHHHHHHH
Q 019931 176 AANMAVIV--AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----C---DMSHLKTLL 246 (334)
Q Consensus 176 ~An~~ai~--al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~---D~~~Le~~l 246 (334)
+|+..++. +++.+ ||.|++..+.|.+....++.. |.+++.+++ + |+++|++.+
T Consensus 106 ~a~~~~~~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l 167 (397)
T 3fsl_A 106 GALKVGADFLKRYFP--------------ESGVWVSDPTWENHVAIFAGA----GFEVSTYPWYDEATNGVRFNDLLATL 167 (397)
T ss_dssp HHHHHHHHHHHHHCT--------------TCCEEEESSCCHHHHHHHHHT----TCCEEEECCEETTTTEECHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--------------CCeEEEeCCCchhHHHHHHHc----CCceEEEeeeeccCCcCcHHHHHHHH
Confidence 99999854 33443 778888888998888887776 788888876 4 899999999
Q ss_pred hcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC--cccccccCCCCCccEEEecCc
Q 019931 247 SCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG--GGVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 247 ~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G--~g~~~~~~~~~~~Div~~Sls 321 (334)
++.++++++|++++++||+|.+.+ +++|+++|++||++||+||+|+...++..+ ..+.. +.-..+.+|+++|||
T Consensus 168 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~S 246 (397)
T 3fsl_A 168 KTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA-IASAGLPALVSNSFS 246 (397)
T ss_dssp TTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH-HHHTTCCEEEEEECT
T ss_pred HhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHH-HHhcCCCEEEEeccc
Confidence 865447899999999999998866 668999999999999999999976654211 11111 111234468999999
Q ss_pred ccccCCc---cEEe
Q 019931 322 KAAGCQG---GFIA 332 (334)
Q Consensus 322 Ka~G~~G---G~i~ 332 (334)
|++|+.| ||++
T Consensus 247 K~~~~~G~riG~~~ 260 (397)
T 3fsl_A 247 KIFSLYGERVGGLS 260 (397)
T ss_dssp TTTTCGGGCCEEEE
T ss_pred ccccCcCCCeeEEE
Confidence 9999777 8875
No 131
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.82 E-value=3.8e-19 Score=177.05 Aligned_cols=212 Identities=13% Similarity=0.123 Sum_probs=148.0
Q ss_pred hhcccceeEEEeecC---ccCCCCCCHHHHHHHHH-hcCCCCccccccCchHHHHHHHHHHHhHhC--CCcEEEeccHHH
Q 019931 103 TFARQFKRLLLFSGN---DYLGLSSHPTIAKAAAR-HGMGPRGSALICGYTNYHRLLESCLADLKK--KEDCLLCPTGFA 176 (334)
Q Consensus 103 ~~~~~g~~~l~f~sn---~yLgl~~~p~v~~a~~~-~g~g~~~sr~~~G~~~~~~~LE~~La~~~g--~e~alv~~sG~~ 176 (334)
.+|.+|++||||.+. ..||. +||+|.+|+++ .......+.+....++...+|.++|+++.+ .+++++++||++
T Consensus 61 l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsE 139 (473)
T 4e3q_A 61 IVDVNGRRYLDANSGLWNMVAGF-DHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSE 139 (473)
T ss_dssp EEETTCCEEEETTTTTTTCTTCS-CCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHH
T ss_pred EEeCCCCEEEEcccCHHHhhccC-CCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHH
Confidence 467889999999774 45677 58999997754 333322223333346777889999999985 467888899999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc---------CCcEEEEeeC----C------
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT---------KMVEVFVYKH----C------ 237 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~---------~g~~v~~~~~----~------ 237 (334)
||+.+++....... ..+ .+++..+|.....+|+.....+.++... .+...+.+++ .
T Consensus 140 A~e~AiKlAr~~~~--~~g---~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 214 (473)
T 4e3q_A 140 ANDTMVKMLWFLHA--AEG---KPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETE 214 (473)
T ss_dssp HHHHHHHHHHHHHH--HTT---CTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCH
T ss_pred HHHHHHHHHHHHHH--hcC---CCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchh
Confidence 99999996542100 000 1234567778889999877666554210 0111222221 1
Q ss_pred ------CHHHHHHHHhcC-CCCcEEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEecCcccccccCCCcccc-c
Q 019931 238 ------DMSHLKTLLSCC-TMRKKVVVTDSLFSMDGDFAP----MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-E 305 (334)
Q Consensus 238 ------D~~~Le~~l~~~-~~~~~lVv~e~v~n~~G~~~p----L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~ 305 (334)
..+++++++.+. ..+..+|++|++.+..|.+.| |++|+++|++||++||+||+++. +|++|.+++ +
T Consensus 215 ~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tG--fGRtG~~fa~e 292 (473)
T 4e3q_A 215 EQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICG--FGRTGNTWGCV 292 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTS--SSTTSSSCHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCcccc--CCcccchhHHH
Confidence 134566666543 235688999999999898766 99999999999999999999984 899999874 7
Q ss_pred ccCCCCCccEEEecCcccccC
Q 019931 306 QFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 306 ~~~~~~~~Div~~SlsKa~G~ 326 (334)
++++.|| |+ |++|+++.
T Consensus 293 ~~gv~PD--i~--t~~K~l~g 309 (473)
T 4e3q_A 293 TYDFTPD--AI--ISSKNLTA 309 (473)
T ss_dssp HTTCCCS--EE--EECGGGGT
T ss_pred hcCCCCC--hH--HhcccccC
Confidence 8999884 55 89999963
No 132
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.82 E-value=2.8e-19 Score=173.82 Aligned_cols=205 Identities=15% Similarity=0.040 Sum_probs=146.7
Q ss_pred eeEEEeecCccCCCC--C--CHHHHHHHHHhc-C-CCCccccccCchHHHHHHHHHHHhHhC----CC--cEEEeccHHH
Q 019931 109 KRLLLFSGNDYLGLS--S--HPTIAKAAARHG-M-GPRGSALICGYTNYHRLLESCLADLKK----KE--DCLLCPTGFA 176 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~--~--~p~v~~a~~~~g-~-g~~~sr~~~G~~~~~~~LE~~La~~~g----~e--~alv~~sG~~ 176 (334)
..+|||+.+.|+.-. . +|.|++++.+.- . +..++....|..++.+++.+.+....+ .+ .++++++|++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~ 128 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTG 128 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHH
Confidence 568999998654322 2 378999776532 2 223344456666666666666655443 34 5677889999
Q ss_pred HHHHHHH--HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----C---CHHHHHHHHh
Q 019931 177 ANMAVIV--AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----C---DMSHLKTLLS 247 (334)
Q Consensus 177 An~~ai~--al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~---D~~~Le~~l~ 247 (334)
|+..++. +++.+ ||.|++..+.|.+....++.. |.+++.++. + |+++|++.++
T Consensus 129 al~~~~~~~~~~~~--------------gd~Vlv~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~ 190 (420)
T 4f4e_A 129 ALKIGADFLRTLNP--------------KAKVAISDPSWENHRALFDMA----GFEVVAYPYYDAKTNGVNFDGMLAALN 190 (420)
T ss_dssp HHHHHHHHHHHHCT--------------TCCEEEEESCCHHHHHHHHHT----TCCEEEEECEETTTTEECHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC--------------CCEEEEeCCCcHhHHHHHHHc----CCeEEEeeeeccccCccCHHHHHHHHH
Confidence 9999854 44543 778888888888888888777 788888876 3 8999999998
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCC--CcccccccCCCCCccEEEecCcc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKN--GGGVAEQFNCERDVDICVGTLSK 322 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~--G~g~~~~~~~~~~~Div~~SlsK 322 (334)
+.++++++|++++++||+|.+.+ +++|+++|++||+++|+||+|+...++.. ...+....+ ..+.+|+++||||
T Consensus 191 ~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK 269 (420)
T 4f4e_A 191 GYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA-ANLNVFVSSSFSK 269 (420)
T ss_dssp TCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH-TTCCEEEEEECTT
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh-cCCCEEEEEeCCc
Confidence 65457899999999999998866 66889999999999999999987655421 111211112 2344699999999
Q ss_pred cccCCc---cEEe
Q 019931 323 AAGCQG---GFIA 332 (334)
Q Consensus 323 a~G~~G---G~i~ 332 (334)
+||+.| ||++
T Consensus 270 ~~~~~G~RiG~~~ 282 (420)
T 4f4e_A 270 SFSLYGERVGALS 282 (420)
T ss_dssp TTTCGGGCEEEEE
T ss_pred cCcCcCCCcEEEE
Confidence 999877 8764
No 133
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.82 E-value=2.3e-19 Score=172.59 Aligned_cols=209 Identities=13% Similarity=0.083 Sum_probs=145.2
Q ss_pred eEEEeecCccCCCCCCH----HHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhC----CCcEEE--eccHHHH
Q 019931 110 RLLLFSGNDYLGLSSHP----TIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKK----KEDCLL--CPTGFAA 177 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p----~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv--~~sG~~A 177 (334)
..+||+.++|++...+| .+++++.++.. +..++....|...+.+++.+.+.+..| .+++++ +++|++|
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~a 108 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGS 108 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHH
Confidence 47899999998877554 46776665432 444444455654444444444443333 456665 8899999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCC
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCT 250 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~ 250 (334)
+..++.++..- .++||.|++..+.|......++.. |.+++.++.. |++++++.+++.+
T Consensus 109 l~~~~~~l~~~-----------~~~gd~Vlv~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 173 (401)
T 7aat_A 109 LRVGANFLQRF-----------FKFSRDVYLPKPSWGNHTPIFRDA----GLQLQAYRYYDPKTCSLDFTGAMEDISKIP 173 (401)
T ss_dssp HHHHHHHHHHH-----------CTTCCEEEEEESCCTTHHHHHHHT----TCEEEEEECEETTTTEECHHHHHHHHTTSC
T ss_pred HHHHHHHHHHh-----------ccCCCEEEEcCCCchhHHHHHHHc----CCeeEeeeeeccccCccCHHHHHHHHHhCC
Confidence 99988876521 013788888888888888887776 7888877742 6788888887654
Q ss_pred CCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC--cccccccCCCCCccEEEecCccccc
Q 019931 251 MRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG--GGVAEQFNCERDVDICVGTLSKAAG 325 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G--~g~~~~~~~~~~~Div~~SlsKa~G 325 (334)
+++++|++++++||+|.+.+ +++|+++|++||+++|+||+|....++... ......+.-..+..|+++||||+||
T Consensus 174 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 253 (401)
T 7aat_A 174 EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMG 253 (401)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSC
T ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccc
Confidence 57899999999999997655 788999999999999999999865443210 0111111111234589999999999
Q ss_pred CCc---cEEee
Q 019931 326 CQG---GFIAC 333 (334)
Q Consensus 326 ~~G---G~i~~ 333 (334)
+.| ||+++
T Consensus 254 ~~G~RiG~l~~ 264 (401)
T 7aat_A 254 LYGERAGAFTV 264 (401)
T ss_dssp CGGGCEEEEEE
T ss_pred cccCceEEEEE
Confidence 887 88653
No 134
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.82 E-value=1.1e-19 Score=179.16 Aligned_cols=204 Identities=17% Similarity=0.112 Sum_probs=142.5
Q ss_pred eeEEEeecCcc-CCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh----CC---CcEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDY-LGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK----KK---EDCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~y-Lgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~----g~---e~alv~~sG~~An~~ 180 (334)
.++|||+++.+ ..+-.++.+++++.+.-.......+.++......+|+++|++++ |. +.++++++|++|+..
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~ 155 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDL 155 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHH
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHH
Confidence 56899988753 33335677888665432110000011111122355666666666 75 567888999999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHh----cCCCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLS----CCTMR 252 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~----~~~~~ 252 (334)
++.+++++ ||.|++..+.|.+....++.. +++++.++. .|+++|+++++ +. .+
T Consensus 156 ~~~~l~~~--------------Gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~-~~ 216 (448)
T 3aow_A 156 IGRVFLNP--------------GDIVVVEAPTYLAALQAFNFY----EPQYIQIPLDDEGMKVEILEEKLKELKSQG-KK 216 (448)
T ss_dssp HHHHHCCT--------------TCEEEEEESCCHHHHHHHHTT----CCEEEEEEEETTEECHHHHHHHHHHHHHTT-CC
T ss_pred HHHHHcCC--------------CCEEEEeCCChHHHHHHHHHc----CCEEEEeccCCCCCCHHHHHHHHhhhhccC-CC
Confidence 99988764 788888888888888777665 788888875 38999999987 32 25
Q ss_pred cEEE-EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccCC
Q 019931 253 KKVV-VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 253 ~~lV-v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~~ 327 (334)
+++| ++.+++||+|.+.| +++|+++|++||++||+||+|+.+.++ |........+. .+.+|+++||||+|| .
T Consensus 217 ~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~--g~~~~~~~~~~~~~~vi~~~S~SK~~~-~ 293 (448)
T 3aow_A 217 VKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYS--GNPEKKIKALDNEGRVIYLGTFSKILA-P 293 (448)
T ss_dssp EEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCS--SCCCCCTGGGCTTSCEEEEEESTTTTC-G
T ss_pred CeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCC--CCCCcCHHhcCCCCCEEEEccchhhcc-c
Confidence 7876 57889999999887 568999999999999999999987653 22221111221 235689999999998 6
Q ss_pred c---cEEeeC
Q 019931 328 G---GFIACR 334 (334)
Q Consensus 328 G---G~i~~~ 334 (334)
| ||++++
T Consensus 294 GlriG~v~~~ 303 (448)
T 3aow_A 294 GFRIGWMVGD 303 (448)
T ss_dssp GGCCEEEEEC
T ss_pred cccEEEEEeC
Confidence 6 898864
No 135
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.82 E-value=1.4e-19 Score=171.87 Aligned_cols=194 Identities=14% Similarity=0.092 Sum_probs=145.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC--CCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM--GPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~--g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~An~~ai~ 183 (334)
+.+|||++|+ ..+..+|.|++++.+.-. +...+ +. +...+|++++++++|. +.++++++|++|+..++.
T Consensus 30 ~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y----~~-~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 30 HGLVKLDAME-NPYRLPPALRSELAARLGEVALNRY----PV-PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp TTCEECCSSC-CCCCCCHHHHHHHHHHHHHHHTTCS----CC-CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHH
T ss_pred CCeeEccCCC-CCCCCCHHHHHHHHHHhhhhhhhcC----CC-CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHH
Confidence 6789999987 677789999997765321 11111 11 2357899999999997 567888899999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
+++++ ||.|++..+.|......++.. |.+++.++. .|+++|++++++. ++++|++
T Consensus 104 ~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~ 163 (367)
T 3euc_A 104 AAARP--------------GAKVMAPVPGFVMYAMSAQFA----GLEFVGVPLRADFTLDRGAMLAAMAEH--QPAIVYL 163 (367)
T ss_dssp HTCCT--------------TCEEEEEESCSCCSCHHHHTT----TCEEEEEECCTTSCCCHHHHHHHHHHH--CCSEEEE
T ss_pred HHcCC--------------CCEEEEcCCCHHHHHHHHHHc----CCeEEEecCCCCCCCCHHHHHHHhhcc--CCCEEEE
Confidence 87654 777888777887777776655 788888874 3899999999752 5788888
Q ss_pred cCCCCCCCCccC---HHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cE
Q 019931 259 DSLFSMDGDFAP---MVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GF 330 (334)
Q Consensus 259 e~v~n~~G~~~p---L~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~ 330 (334)
++++|++|.+.| +++|+++|++| |+++|+||+|+... + .+.....+. .+.++++.||||+ +..| ||
T Consensus 164 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~---~~~~~~~~~-~~~~i~~~s~sK~-~~~G~r~G~ 237 (367)
T 3euc_A 164 AYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-Q---ESWMSRLTD-FGNLLVMRTVSKL-GLAGIRLGY 237 (367)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-S---CCSGGGGGT-CTTEEEEEECCCT-TSCSCCEEE
T ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-c---cchHHHHhh-CCCEEEEecchhh-cccccCcee
Confidence 899999999865 77788889999 99999999998632 1 122212221 3346889999999 7665 88
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 238 ~~~~ 241 (367)
T 3euc_A 238 VAGD 241 (367)
T ss_dssp EEEC
T ss_pred eeeC
Confidence 8763
No 136
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.82 E-value=5.1e-20 Score=179.31 Aligned_cols=201 Identities=17% Similarity=0.145 Sum_probs=140.8
Q ss_pred eeEEEeecC--ccCCCCCCHHHHHHHHHhcC-C---CCccccccCchHHHHHHHHHHHhHh----CC-----CcEEEecc
Q 019931 109 KRLLLFSGN--DYLGLSSHPTIAKAAARHGM-G---PRGSALICGYTNYHRLLESCLADLK----KK-----EDCLLCPT 173 (334)
Q Consensus 109 ~~~l~f~sn--~yLgl~~~p~v~~a~~~~g~-g---~~~sr~~~G~~~~~~~LE~~La~~~----g~-----e~alv~~s 173 (334)
+++|||+++ ++.++ .+|.+++++.+.-. . ...+....|. .+|++++++++ |. +.++++++
T Consensus 43 ~~~idl~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~----~~lr~~la~~l~~~~g~~~~~~~~v~~t~G 117 (425)
T 1vp4_A 43 KDAISFGGGVPDPETF-PRKELAEIAKEIIEKEYHYTLQYSTTEGD----PVLKQQILKLLERMYGITGLDEDNLIFTVG 117 (425)
T ss_dssp TTCEECCCCSCCGGGS-CHHHHHHHHHHHHHHSHHHHTSCCCTTCC----HHHHHHHHHHHHHHHCCCSCCGGGEEEEEH
T ss_pred CCceeCCCCCCCcccC-CHHHHHHHHHHHHhhcchhhcCCCCCCCC----HHHHHHHHHHHHhccCCCCCCcccEEEecc
Confidence 678999886 44444 57888887654321 1 0111112233 55666666666 72 35777788
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcC
Q 019931 174 GFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCC 249 (334)
Q Consensus 174 G~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~ 249 (334)
|++|+..++.+++++ ||.|++..+.|.+....++.. |.+++.++. .|+++|++++++.
T Consensus 118 ~~~al~~~~~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~l~~~ 179 (425)
T 1vp4_A 118 SQQALDLIGKLFLDD--------------ESYCVLDDPAYLGAINAFRQY----LANFVVVPLEDDGMDLNVLERKLSEF 179 (425)
T ss_dssp HHHHHHHHHHHHCCT--------------TCEEEEEESCCHHHHHHHHTT----TCEEEEEEEETTEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC--------------CCEEEEeCCCcHHHHHHHHHc----CCEEEEeccCCCCCCHHHHHHHHHhh
Confidence 899999999988654 788888888888887777665 788887775 3899999988751
Q ss_pred -----CCCcEEE-EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC
Q 019931 250 -----TMRKKVV-VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL 320 (334)
Q Consensus 250 -----~~~~~lV-v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl 320 (334)
..++++| ++.+++||+|.+.| +++|+++|++||++||+||+|+.+.++.........++. .+.+|+++||
T Consensus 180 ~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~i~~~s~ 258 (425)
T 1vp4_A 180 DKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG-PERVVLLNTF 258 (425)
T ss_dssp HHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC-TTTEEEEEES
T ss_pred hhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC-CCCEEEEecc
Confidence 1257777 58899999999887 678999999999999999999976553221111112221 2346899999
Q ss_pred cccccCCc---cEEeeC
Q 019931 321 SKAAGCQG---GFIACR 334 (334)
Q Consensus 321 sKa~G~~G---G~i~~~ 334 (334)
||+|| .| ||++++
T Consensus 259 sK~~~-~G~r~G~~~~~ 274 (425)
T 1vp4_A 259 SKVLA-PGLRIGMVAGS 274 (425)
T ss_dssp TTTTC-GGGCEEEEECC
T ss_pred ccccc-cccceEEEeeC
Confidence 99999 66 888764
No 137
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.82 E-value=6.1e-20 Score=176.06 Aligned_cols=205 Identities=14% Similarity=0.119 Sum_probs=144.2
Q ss_pred eeEEEeecCccCCC----CCCHHHHHHHHHhc-C-CCCccccccCchHHHHHHHHHHHhHh-C----CCcEEE--eccHH
Q 019931 109 KRLLLFSGNDYLGL----SSHPTIAKAAARHG-M-GPRGSALICGYTNYHRLLESCLADLK-K----KEDCLL--CPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLgl----~~~p~v~~a~~~~g-~-g~~~sr~~~G~~~~~~~LE~~La~~~-g----~e~alv--~~sG~ 175 (334)
.+++||++++|++. ..+|.+++++.+.- . ...++....| ..+|++++++++ + .+++++ +++|+
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g----~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~ 101 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSG----EPEFQKAMGELILGDGLKSETTATLATVGGT 101 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSC----CHHHHHHHHHHHHGGGCCGGGEEEEEEEHHH
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCC----cHHHHHHHHHHHhCCCCCcccEEEEecCCch
Confidence 67899999998654 34799999876542 1 1111211222 367888888875 4 356777 89999
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---C----CHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---C----DMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---~----D~~~Le~~l~~ 248 (334)
+|+..++.++..- .+||.|++..+.|......++.. +.+++.++. + |+++|++++++
T Consensus 102 ~a~~~~~~~~~~~------------~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 165 (394)
T 2ay1_A 102 GALRQALELARMA------------NPDLRVFVSDPTWPNHVSIMNFM----GLPVQTYRYFDAETRGVDFEGMKADLAA 165 (394)
T ss_dssp HHHHHHHHHHHHH------------CTTCCEEEEESCCHHHHHHHHHH----TCCEEEEECEETTTTEECHHHHHHHHHT
T ss_pred hHHHHHHHHHHhc------------CCCCEEEEcCCCChhHHHHHHHc----CCceEEEecccccCCccCHHHHHHHHHh
Confidence 9999999877641 02666777777787877777766 777887776 3 89999999976
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-ccccCCCCCccEEEecCcccc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-AEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~~~~~~~~~~Div~~SlsKa~ 324 (334)
.++++++|++++++||+|.+.| +++|+++|++||+++|+||+|+.+.++....+. ...+....+.+|+++||||+|
T Consensus 166 ~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 245 (394)
T 2ay1_A 166 AKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNF 245 (394)
T ss_dssp CCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCC
Confidence 4335788889999999999877 667899999999999999999975442100111 111111122358899999999
Q ss_pred cCCc---cEEee
Q 019931 325 GCQG---GFIAC 333 (334)
Q Consensus 325 G~~G---G~i~~ 333 (334)
|+.| ||+++
T Consensus 246 ~~~G~riG~~~~ 257 (394)
T 2ay1_A 246 GIYRERTGCLLA 257 (394)
T ss_dssp TCGGGCEEEEEE
T ss_pred cCcCCccceEEE
Confidence 9767 88765
No 138
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.82 E-value=1.5e-19 Score=170.99 Aligned_cols=192 Identities=13% Similarity=0.045 Sum_probs=136.4
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~a 184 (334)
+|+++|||++|.. .+..+|.+++++.+.-.....+ . .+...+++++++++++. +.++++++|++|+..++.+
T Consensus 24 ~~~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~y---~--~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~ 97 (361)
T 3ftb_A 24 KGRELLDYSSNIN-PLGIPKSFLNNIDEGIKNLGVY---P--DVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISL 97 (361)
T ss_dssp ----CEETTCCCC-TTCSCHHHHTTHHHHHHGGGSC---C--CTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTT
T ss_pred CCCCEEEecCCCC-CCCCCHHHHHHHHHHHHHhcCC---C--CccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHH
Confidence 4589999999842 3446899999765432111111 1 12347899999999984 4677789999999988865
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEc
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e 259 (334)
+ |.|++..+.|.+....++.. |.+++.++.+ |+++|++++++ +++|+++
T Consensus 98 ~------------------d~vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~l~~~l~~----~~~v~i~ 151 (361)
T 3ftb_A 98 F------------------EKILIIVPSYAEYEINAKKH----GVSVVFSYLDENMCIDYEDIISKIDD----VDSVIIG 151 (361)
T ss_dssp C------------------SEEEEEESCCTHHHHHHHHT----TCEEEEEECCTTSCCCHHHHHHHTTT----CSEEEEE
T ss_pred c------------------CcEEEecCChHHHHHHHHHc----CCeEEEeecCcccCCCHHHHHHhccC----CCEEEEe
Confidence 4 34676777777777777766 8888888743 67888888863 7888899
Q ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEe
Q 019931 260 SLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 260 ~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~ 332 (334)
+++||+|.+.| +++|+++|++||++||+||+|+.+.++ .+.+.....+. .+.++++.||||++|..| |+++
T Consensus 152 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~g~~~ 228 (361)
T 3ftb_A 152 NPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKN-YSCLFIIRAMTKFFAMPGIRFGYGI 228 (361)
T ss_dssp TTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTT-CSSEEEEEESSSTTSCGGGCCEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhccc-CCCEEEEeeChhhcCCCCcceeEEE
Confidence 99999999887 667888888999999999999976554 22333333222 234588999999998655 8876
No 139
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.82 E-value=2e-19 Score=173.58 Aligned_cols=198 Identities=17% Similarity=0.193 Sum_probs=126.6
Q ss_pred eEEEe-ecCccCCCCCCHHHHHHHHHh-----cCCCCccccccCch--HHHHHHH-HHHHhHhCCCcEEE-eccHHHHHH
Q 019931 110 RLLLF-SGNDYLGLSSHPTIAKAAARH-----GMGPRGSALICGYT--NYHRLLE-SCLADLKKKEDCLL-CPTGFAANM 179 (334)
Q Consensus 110 ~~l~f-~sn~yLgl~~~p~v~~a~~~~-----g~g~~~sr~~~G~~--~~~~~LE-~~La~~~g~e~alv-~~sG~~An~ 179 (334)
+.+++ ++++|+ ||.|++++.+. +.+..+++...+.. +..+++. +.+++++|.+.+.+ +++|++|+.
T Consensus 33 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~ 108 (425)
T 3ecd_A 33 SQVELIASENIV----SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANG 108 (425)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred cceeeecccCCC----CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHH
Confidence 34555 455665 99999987543 23444444444432 2345554 77889999988754 899999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~ 252 (334)
.++++++++ ||.|++..+.|.+ +..+........+.+++.++.+ |+++|++++++. +
T Consensus 109 ~al~~~~~~--------------gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~ 172 (425)
T 3ecd_A 109 AVMLALAKP--------------GDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH--K 172 (425)
T ss_dssp HHHHHHCCT--------------TCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHH--C
T ss_pred HHHHHccCC--------------CCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc--C
Confidence 999988654 7888888888877 3344432211113355566543 899999999742 5
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEE
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFI 331 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i 331 (334)
+++|++++++| |...++++|.++|++||++||+||+|..|.+.. +. +++..+.+||+++||||+| |..||++
T Consensus 173 ~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~-~~----~~~~~~~~di~~~s~sK~l~g~~~g~~ 245 (425)
T 3ecd_A 173 PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAA-GR----HANPVEHAHVVTSTTHKTLRGPRGGFV 245 (425)
T ss_dssp CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT-TS----SCCGGGTCSEEEEESSGGGCCCSCEEE
T ss_pred CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhc-cc----ccCchhcCcEEEecCCcccCCCCcEEE
Confidence 78888876665 578899999999999999999999998876532 21 1222334689999999999 4578998
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 246 ~~~ 248 (425)
T 3ecd_A 246 LTN 248 (425)
T ss_dssp EES
T ss_pred EeC
Confidence 864
No 140
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.82 E-value=2.7e-19 Score=172.78 Aligned_cols=202 Identities=13% Similarity=0.046 Sum_probs=144.0
Q ss_pred ceeEEEeecCccCCCC----CCHHHHHHHHHhc--CCC-CccccccCchHHHHHHHHHHHhHh-C-------CCcEEE--
Q 019931 108 FKRLLLFSGNDYLGLS----SHPTIAKAAARHG--MGP-RGSALICGYTNYHRLLESCLADLK-K-------KEDCLL-- 170 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~----~~p~v~~a~~~~g--~g~-~~sr~~~G~~~~~~~LE~~La~~~-g-------~e~alv-- 170 (334)
|+.++||++++|++.. .+|.+++++.+.. .+. ..+... ....+|++++++++ + .+++++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~----~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~ 104 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPI----LGLAEFRTCASRLALGDDSPALQEKRVGGVQ 104 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCT----TCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCC----CCCHHHHHHHHHHHhcCCCCccCCCcEEEEE
Confidence 4778999999987643 3588988887653 211 112122 22367888888877 4 267888
Q ss_pred eccHHHHHHHHHHH--HhhhhhhccCCCccCCCCC-----eEEEEcCCCchhhHHHHHHhhhcCCcE-EEEeeC---C--
Q 019931 171 CPTGFAANMAVIVA--VGNIASLLAGDEKSFKDEK-----IAIFSDALNHASIIDGIRIAERTKMVE-VFVYKH---C-- 237 (334)
Q Consensus 171 ~~sG~~An~~ai~a--l~~~~~~~~~~~~~~~~~g-----d~Vl~d~~~H~s~~~g~~ls~~~~g~~-v~~~~~---~-- 237 (334)
+++|++|+..++.. ++.+ | |.|++..+.|......++.. |.+ ++.++. +
T Consensus 105 t~gg~~a~~~~~~~~~~~~~--------------g~~~~~d~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~ 166 (412)
T 1ajs_A 105 SLGGTGALRIGAEFLARWYN--------------GTNNKDTPVYVSSPTWENHNGVFTTA----GFKDIRSYRYWDTEKR 166 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHSS--------------SSSCCCSCEEEEESCCTHHHHHHHHT----TCSCEEEEECEETTTT
T ss_pred CCCcHHHHHHHHHHHHHhCc--------------CcCCCCCeEEEcCCCcHHHHHHHHHc----CCceeEEEeeecCCCC
Confidence 99999999998653 3332 5 77777777777777777666 777 777775 3
Q ss_pred --CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC---ccc-ccccC
Q 019931 238 --DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG---GGV-AEQFN 308 (334)
Q Consensus 238 --D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G---~g~-~~~~~ 308 (334)
|+++|++++++.+.++++|++.+++||+|.+.| +++|+++|++||++||+||+|....+ .| ... ...+.
T Consensus 167 ~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~--~~~~~~~~~~~~~~ 244 (412)
T 1ajs_A 167 GLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFAS--GNLEKDAWAIRYFV 244 (412)
T ss_dssp EECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT--SCHHHHTHHHHHHH
T ss_pred ccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccC--CcccccchHHHHHh
Confidence 799999999764446788889999999998866 66899999999999999999885333 22 111 11121
Q ss_pred CCCCccEEEecCcccccCCc---cEEee
Q 019931 309 CERDVDICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 309 ~~~~~Div~~SlsKa~G~~G---G~i~~ 333 (334)
..++.+|++.||||++|+.| ||+++
T Consensus 245 ~~~~~~i~~~s~sK~~~~~G~riG~~~~ 272 (412)
T 1ajs_A 245 SEGFELFCAQSFSKNFGLYNERVGNLTV 272 (412)
T ss_dssp HTTCCEEEEEECTTTSCCGGGCEEEEEE
T ss_pred ccCCcEEEEEecccccCCCCcceEEEEE
Confidence 12334588999999999877 88875
No 141
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.82 E-value=3.2e-20 Score=178.57 Aligned_cols=202 Identities=20% Similarity=0.195 Sum_probs=141.5
Q ss_pred eeEEEeecC--ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHHHHHHH
Q 019931 109 KRLLLFSGN--DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK--EDCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 109 ~~~l~f~sn--~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~~ai~a 184 (334)
++++||+++ ++.++ .+|.+++++.+.-.........++......+|++++++++|. +.++++++|++|+..++.+
T Consensus 32 ~~~i~l~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~ 110 (397)
T 2zyj_A 32 PGILSFAGGLPAPELF-PKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKV 110 (397)
T ss_dssp TTCEEESSCCCCGGGC-CHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHH
T ss_pred CCceecCCCCCCchhC-CHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHH
Confidence 578999876 44443 578888866543110000001111122347899999999885 4677778889999999998
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCcEEE-EEc
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRKKVV-VTD 259 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~~lV-v~e 259 (334)
+.++ ||.|++..+.|.+....++.. |.+++.++. .|+++|++++++. ++++| +++
T Consensus 111 ~~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~ 170 (397)
T 2zyj_A 111 FLDE--------------GSPVLLEAPSYMGAIQAFRLQ----GPRFLTVPAGEEGPDLDALEEVLKRE--RPRFLYLIP 170 (397)
T ss_dssp HCCT--------------TCEEEEEESCCHHHHHHHHTT----CCEEEEEEEETTEECHHHHHHHHHHC--CCSCEEECC
T ss_pred hCCC--------------CCEEEEeCCCcHHHHHHHHHc----CCEEEecCcCCCCCCHHHHHHHHhhc--CCeEEEECC
Confidence 8654 778888888888877777665 788887775 3899999999752 46666 678
Q ss_pred CCCCCCCCccCH---HHHHHHHHHcCCEEEEecCcccccccCCCccc--ccccCCC--CCccEEEecCcccccCCc---c
Q 019931 260 SLFSMDGDFAPM---VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV--AEQFNCE--RDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 260 ~v~n~~G~~~pL---~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~--~~~~~~~--~~~Div~~SlsKa~G~~G---G 329 (334)
+++||+|.+.|. ++|+++|++||++||+||+|+.+.++ |... ...++.. .+.+++++|+||+|| .| |
T Consensus 171 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G 247 (397)
T 2zyj_A 171 SFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFG--EARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVA 247 (397)
T ss_dssp BSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCS--SCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCE
T ss_pred CCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCC--CCCCCchhhhCcccCCCeEEEEeccccccc-ccceeE
Confidence 999999999884 58999999999999999999976553 2221 1112211 023488999999998 55 8
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 248 ~~~~~ 252 (397)
T 2zyj_A 248 FAVAH 252 (397)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88764
No 142
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=5e-19 Score=171.05 Aligned_cols=203 Identities=14% Similarity=0.067 Sum_probs=142.0
Q ss_pred ceeEEEeecCccCCCC----CCHHHHHHHHH-hcCCC--CccccccCchHHHHHHHHHHHhHh-C-------CCcEEE--
Q 019931 108 FKRLLLFSGNDYLGLS----SHPTIAKAAAR-HGMGP--RGSALICGYTNYHRLLESCLADLK-K-------KEDCLL-- 170 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~----~~p~v~~a~~~-~g~g~--~~sr~~~G~~~~~~~LE~~La~~~-g-------~e~alv-- 170 (334)
+++++||++++|++.. .+|.+++++.+ +.... ..+....| ..+|++++++++ + .+++++
T Consensus 28 ~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~ 103 (412)
T 1yaa_A 28 RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITG----LPSLTSNAAKIIFGTQSDALQEDRVISVQ 103 (412)
T ss_dssp CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTC----CHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCC----cHHHHHHHHHHHhcCCCCCCCcceEEEEe
Confidence 4778999999998774 46889998877 54311 11222233 356777777766 2 367888
Q ss_pred eccHHHHHHHHHHH--HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHH
Q 019931 171 CPTGFAANMAVIVA--VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSH 241 (334)
Q Consensus 171 ~~sG~~An~~ai~a--l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~ 241 (334)
+++|++|+..++.. +..+ ||.|++..+.|......++.. |.+++.++. .|+++
T Consensus 104 t~g~~~a~~~~~~~~~~~~~--------------gd~Vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~ 165 (412)
T 1yaa_A 104 SLSGTGALHISAKFFSKFFP--------------DKLVYLSKPTWANHMAIFENQ----GLKTATYPYWANETKSLDLNG 165 (412)
T ss_dssp EEHHHHHHHHHHHHHHHHCT--------------TCCEEEEESCCTTHHHHHHTT----TCCEEEEECEETTTTEECHHH
T ss_pred ccchHhHHHHHHHHHHHhCC--------------CCEEEEeCCCCccHHHHHHHc----CceEEEEeeecCCCCccCHHH
Confidence 88999999988533 2333 677777778888887777665 778877776 27999
Q ss_pred HHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccC---CCcccccccCCCCC--c
Q 019931 242 LKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGK---NGGGVAEQFNCERD--V 313 (334)
Q Consensus 242 Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~---~G~g~~~~~~~~~~--~ 313 (334)
|++.+++.+.+++++++.+++||+|.+.+ +++|+++|++||+++|+||+|....++. .+..+.......++ .
T Consensus 166 l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (412)
T 1yaa_A 166 FLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSP 245 (412)
T ss_dssp HHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCC
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcc
Confidence 99999764323567777999999999876 6678999999999999999997544431 11122111111221 4
Q ss_pred cEEEecCcccccCCc---cEEe
Q 019931 314 DICVGTLSKAAGCQG---GFIA 332 (334)
Q Consensus 314 Div~~SlsKa~G~~G---G~i~ 332 (334)
+|+++||||+||+.| ||++
T Consensus 246 ~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 246 VFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp EEEEEECTTTSCCGGGCEEEEE
T ss_pred eEEEeccCCCCCCcCCcceEEE
Confidence 688999999999877 8876
No 143
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.82 E-value=1.5e-19 Score=170.11 Aligned_cols=201 Identities=15% Similarity=0.142 Sum_probs=144.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCc-EEEeccHHHHHHHHHHHHhh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKED-CLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~-alv~~sG~~An~~ai~al~~ 187 (334)
..+|||+++.+. ..+|++++++.+...+ +...+|..+..+++++++++++|.+. ++++++|++|+..++.++.+
T Consensus 7 ~~~id~~~~~~~--~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~ 81 (356)
T 1v72_A 7 PPALGFSSDNIA--GASPEVAQALVKHSSG---QAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTP 81 (356)
T ss_dssp CCCCBCSCGGGC--CCCHHHHHHHHHTTSS---CCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCC
T ss_pred CceEeeccCCcc--CCCHHHHHHHHhhccC---cccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcC
Confidence 468899988653 3589999998876433 22344556888999999999999665 57779999999999987654
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHH--HHHhhhcC-CcEEEEeeCC----CHHHHHH-HHhcC----CCCcEE
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDG--IRIAERTK-MVEVFVYKHC----DMSHLKT-LLSCC----TMRKKV 255 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g--~~ls~~~~-g~~v~~~~~~----D~~~Le~-~l~~~----~~~~~l 255 (334)
+ +|.|++..+.|.+.... +... . |.+++.++.+ |+++|++ ++++. .+++++
T Consensus 82 ~--------------gd~vi~~~~~~~~~~~~~~~~~~---~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~ 144 (356)
T 1v72_A 82 P--------------WGNIYCHPASHINNDECGAPEFF---SNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPAC 144 (356)
T ss_dssp T--------------TEEEEECTTSHHHHSSTTHHHHH---TTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEE
T ss_pred C--------------CCEEEEcCccchhhhhchHHHHH---hCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceE
Confidence 3 78899999898876544 3322 1 4677777654 8899998 88641 125789
Q ss_pred EEEcCCCCCCCCc---cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEE
Q 019931 256 VVTDSLFSMDGDF---APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFI 331 (334)
Q Consensus 256 Vv~e~v~n~~G~~---~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i 331 (334)
|++++++| +|.+ .++++|+++|++||++||+|++|..+.+...|... ..+++..++|+++.|+||+.+..| |++
T Consensus 145 v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~g~~~G~g~~ 222 (356)
T 1v72_A 145 VSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEMTWKAGVDALSFGATKNGVLAAEAIV 222 (356)
T ss_dssp EEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTTTGGGTCCEEEECCGGGTCSSCEEEE
T ss_pred EEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHhhhhhcCCEEEEecccCCCcCccEEE
Confidence 99998876 9984 45889999999999999999999854221111111 112222356888899999944456 587
Q ss_pred ee
Q 019931 332 AC 333 (334)
Q Consensus 332 ~~ 333 (334)
++
T Consensus 223 ~~ 224 (356)
T 1v72_A 223 LF 224 (356)
T ss_dssp ES
T ss_pred EE
Confidence 65
No 144
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.81 E-value=2.7e-19 Score=171.27 Aligned_cols=190 Identities=20% Similarity=0.200 Sum_probs=142.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al 185 (334)
+.|++..+.. ..+|.+++++.++.... +.....+..+++++.+++++|.+ .++++++|++|+..++.++
T Consensus 34 ~~~l~~~~~~----~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~ 105 (393)
T 1vjo_A 34 SRLLLGPGPS----NAHPSVLQAMNVSPVGH----LDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANA 105 (393)
T ss_dssp CCEECSSSCC----CCCHHHHHHHSSCCCCT----TSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHH
T ss_pred cceeccCCCC----CCCHHHHHHHhcccccc----cCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhc
Confidence 4566644332 35799999887654321 11113467889999999999975 5778899999999999988
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEE
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
+.+ +|.|++..+.|.+ +...++.. |.+++.++. .|+++|++.+++. ++++|++
T Consensus 106 ~~~--------------gd~Vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~ 165 (393)
T 1vjo_A 106 VEP--------------GDVVLIGVAGYFGNRLVDMAGRY----GADVRTISKPWGEVFSLEELRTALETH--RPAILAL 165 (393)
T ss_dssp CCT--------------TCEEEEEESSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCHHHHHHHHHHH--CCSEEEE
T ss_pred cCC--------------CCEEEEEcCChhHHHHHHHHHHc----CCceEEEecCCCCCCCHHHHHHHHhhC--CceEEEE
Confidence 654 6778877777777 66655555 788888873 5899999999752 5678999
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--cEEeeC
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG--GFIACR 334 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G--G~i~~~ 334 (334)
++++|++|.+.|+++|.++|++||++||+||+|++|.. ... .. ..++|++++|+||++++.| |+++++
T Consensus 166 ~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~---~~~----~~-~~~~di~~~s~sK~l~~~~~~G~l~~~ 235 (393)
T 1vjo_A 166 VHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGV---PIF----LD-AWGVDLAYSCSQKGLGCSPGASPFTMS 235 (393)
T ss_dssp ESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTS---CCC----TT-TTTCSEEECCSSSTTCSCSSCEEEEEC
T ss_pred eccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCc---CCc----cc-ccCccEEEEcCcccccCCCceEEEEEC
Confidence 99999999999999999999999999999999995432 111 11 1356899999999997654 777653
No 145
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1.4e-19 Score=178.00 Aligned_cols=198 Identities=19% Similarity=0.168 Sum_probs=139.3
Q ss_pred eEEEeec-CccCCCCCCHHHHHHHHH-----hcCCCCccccccCchHHH--HHHH-HHHHhHhCCCcEEE-eccHHHHHH
Q 019931 110 RLLLFSG-NDYLGLSSHPTIAKAAAR-----HGMGPRGSALICGYTNYH--RLLE-SCLADLKKKEDCLL-CPTGFAANM 179 (334)
Q Consensus 110 ~~l~f~s-n~yLgl~~~p~v~~a~~~-----~g~g~~~sr~~~G~~~~~--~~LE-~~La~~~g~e~alv-~~sG~~An~ 179 (334)
+.|++.+ .+++ +|+|++++.+ |..|..+++.+.|..... +++. +++++++|.+.+.+ ++||++||.
T Consensus 46 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~ 121 (447)
T 3h7f_A 46 DTLEMIASENFV----PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANA 121 (447)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred CceeEecCCCCC----CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHH
Confidence 4456544 4554 9999997743 444555666666654443 4455 99999999998877 899999999
Q ss_pred HHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEee------CCCHHHHHHHHhcCCCC
Q 019931 180 AVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYK------HCDMSHLKTLLSCCTMR 252 (334)
Q Consensus 180 ~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~------~~D~~~Le~~l~~~~~~ 252 (334)
.++.+++++ ||.|++..+.|.+ +..+..+........++.++ +.|+++|++++++. +
T Consensus 122 ~a~~~~~~~--------------Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~ 185 (447)
T 3h7f_A 122 AVLHALMSP--------------GERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEF--R 185 (447)
T ss_dssp HHHHHHCCT--------------TCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHH--C
T ss_pred HHHHHhcCC--------------CCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhc--C
Confidence 999988765 7888888887766 32222111101134555554 35899999999642 4
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCccEE
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFI 331 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i 331 (334)
+++|++.++.++.+. |+++|+++|++||++||+||+|..|+... |. +.+..+++||++.|+||+|+ ..|||+
T Consensus 186 ~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~-g~----~~~~~~~~di~~~s~sK~l~G~~gG~i 258 (447)
T 3h7f_A 186 PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAA-GL----HPSPVPHADVVSTTVHKTLGGGRSGLI 258 (447)
T ss_dssp CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHT-TS----SCCSTTTCSEEEEESSGGGCCCSCEEE
T ss_pred CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcC-CC----CCCCCCCCcEEEecCCcCCCCCCeEEE
Confidence 678877666665443 99999999999999999999998775421 21 22233567899999999996 578998
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 259 ~~~ 261 (447)
T 3h7f_A 259 VGK 261 (447)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 146
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.81 E-value=3.8e-19 Score=171.37 Aligned_cols=197 Identities=18% Similarity=0.187 Sum_probs=133.1
Q ss_pred eEEEe-ecCccCCCCCCHHHHHHHHHh-----cCCCCccccccCchHHHHHHHH----HHHhHhCCCcE-EEeccHHHHH
Q 019931 110 RLLLF-SGNDYLGLSSHPTIAKAAARH-----GMGPRGSALICGYTNYHRLLES----CLADLKKKEDC-LLCPTGFAAN 178 (334)
Q Consensus 110 ~~l~f-~sn~yLgl~~~p~v~~a~~~~-----g~g~~~sr~~~G~~~~~~~LE~----~La~~~g~e~a-lv~~sG~~An 178 (334)
+.+++ ++++|+ +|.|++++.+. +.+..+++.+.|. ..+.++|+ ++++++|.+.. +++++|++|+
T Consensus 26 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~ 100 (417)
T 3n0l_A 26 EGLEMIASENFT----LPEVMEVMGSILTNKYAEGYPGKRYYGGC-EFVDEIETLAIERCKKLFNCKFANVQPNSGSQAN 100 (417)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTBGGGGCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred cCeeeecccCCC----CHHHHHHHhhhhhccccccCCCccccccc-hHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHH
Confidence 34554 556665 89999987543 2333444445444 55566665 88889998876 7789999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHH-HHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIID-GIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~-g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~ 252 (334)
..++.+++++ ||.|++..+.|.+... +..+.....+..++.++. .|+++|++++++. +
T Consensus 101 ~~~~~~~~~~--------------gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~ 164 (417)
T 3n0l_A 101 QGVYAALINP--------------GDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE--K 164 (417)
T ss_dssp HHHHHHHSCT--------------TCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH--C
T ss_pred HHHHHHhcCC--------------CCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc--C
Confidence 9999988764 7888888888766433 212111112445566654 4899999999742 5
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCccEE
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFI 331 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i 331 (334)
+++|++.++++ |.+.|+++|.++|++||++||+|++|..|.... +. +....+.+||+++|+||+|+ ..|||+
T Consensus 165 ~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~----~~~~~~~~di~~~s~sK~l~g~~~G~~ 237 (417)
T 3n0l_A 165 PKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVA-GE----HPSPFPYAHVVSSTTHKTLRGPRGGII 237 (417)
T ss_dssp CSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TS----SCCCTTTCSEEEEESSTTTCSCSCEEE
T ss_pred CeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhc-cc----CCCccccceEEEeeCccccCCCCeeEE
Confidence 77887766554 889999999999999999999999998776532 11 11222357899999999994 468998
Q ss_pred eeC
Q 019931 332 ACR 334 (334)
Q Consensus 332 ~~~ 334 (334)
+++
T Consensus 238 ~~~ 240 (417)
T 3n0l_A 238 MTN 240 (417)
T ss_dssp EES
T ss_pred EEC
Confidence 874
No 147
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.81 E-value=8.3e-19 Score=164.25 Aligned_cols=187 Identities=14% Similarity=0.084 Sum_probs=139.8
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHH
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al 185 (334)
+++|+|++| ++++ .+|.+++++.+...+...+ . .+...+|+++++++++.+ .+++++++++++..++.++
T Consensus 16 ~~~i~l~~n~~~~~--~~~~v~~a~~~~~~~~~~y----~-~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~ 88 (337)
T 3p1t_A 16 AQAVCLAFNENPEA--VEPRVQAAIAAAAARINRY----P-FDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF 88 (337)
T ss_dssp CCCEECSSCCCCSC--CCHHHHHHHHHHGGGTTSC----C-TTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS
T ss_pred CCceEeeCCCCCCC--CCHHHHHHHHHhhhhhccC----C-CCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc
Confidence 779999999 5555 5799999887764432222 1 355689999999999975 4666677777888777765
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
+ ||.|+++.+.|.++...++.. |.+++.++.+ |+++|+++ .++++|++++
T Consensus 89 --~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~-----~~~~~v~i~~ 143 (337)
T 3p1t_A 89 --S--------------SMRFVTAWPGFDGYRARIAVS----GLRHFEIGLTDDLLLDPNDLAQV-----SRDDCVVLAN 143 (337)
T ss_dssp --T--------------TSEEEEESSSCSHHHHHHTTS----CCEEEEECBCTTSSBCHHHHTTC-----CTTEEEEEES
T ss_pred --C--------------CCeEEEeCCCcHHHHHHHHHc----CCEEEEecCCCCCCCCHHHHHhh-----cCCCEEEEeC
Confidence 4 678888888888887777655 8888888743 67776654 2678999999
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.|+++|.++|+++++ +|+||+|+. ++..+... .. ..+.+|+++||||.||+.| ||++++
T Consensus 144 p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~~--~~~~~~~~---~~-~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 213 (337)
T 3p1t_A 144 PSNPTGQALSAGELDQLRQRAGK-LLIDETYVD--YSSFRARG---LA-YGENELVFRSFSKSYGLAGLRLGALFGP 213 (337)
T ss_dssp SCTTTCCCCCHHHHHHHHHHCSE-EEEECTTGG--GSSCSSSC---CC-CBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred CCCCCCCCCCHHHHHHHHHhCCc-EEEECCChh--hccccccc---cc-cCCCEEEEeeCchhccCcchheEEEEeC
Confidence 99999999999999999999997 666999985 32222111 11 1345799999999998666 888764
No 148
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.70 E-value=1.5e-21 Score=187.88 Aligned_cols=202 Identities=16% Similarity=0.147 Sum_probs=145.1
Q ss_pred hcccce--eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHh----C----CCcEEEecc
Q 019931 104 FARQFK--RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPT 173 (334)
Q Consensus 104 ~~~~g~--~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~s 173 (334)
++.+|+ +++||+++++ ++..+|.+++++.+.-.. . ..++.+...++++++++++ | .+.++++++
T Consensus 24 ~d~~g~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~-~----~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g 97 (392)
T 3b1d_A 24 WKETETDPQLLPAWIADM-DFEVMPEVKQAIHDYAEQ-L----VYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEG 97 (392)
Confidence 455566 9999999985 888899999987654221 0 1112222566777777754 3 356777788
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCHHHHHHH
Q 019931 174 GFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDMSHLKTL 245 (334)
Q Consensus 174 G~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~~~Le~~ 245 (334)
|++|+..+++++..+ +|.|++..+.|.+....++.. +.+++.++. .|+++|+++
T Consensus 98 ~~~a~~~~~~~~~~~--------------gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~g~~~~d~~~l~~~ 159 (392)
T 3b1d_A 98 VVPAISIAIQAFTKE--------------GEAVLINSPVYPPFARSVRLN----NRKLVSNSLKEENGLFQIDFEQLEND 159 (392)
Confidence 899999999988764 778888888887777766655 666666654 367888888
Q ss_pred HhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC---CCccEEEec
Q 019931 246 LSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE---RDVDICVGT 319 (334)
Q Consensus 246 l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~---~~~Div~~S 319 (334)
+++ .++++|++++++||+|.+.| +++|+++|++||++||+||+|+...++ |.+......+. .+.+++++|
T Consensus 160 l~~--~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~i~~~s 235 (392)
T 3b1d_A 160 IVE--NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLF--GHEHVSFNTVSPDFKDFALVLSS 235 (392)
Confidence 763 25778888999999998876 889999999999999999999976553 22222222221 234688999
Q ss_pred CcccccCCc---cEEee
Q 019931 320 LSKAAGCQG---GFIAC 333 (334)
Q Consensus 320 lsKa~G~~G---G~i~~ 333 (334)
|||+||..| ||+++
T Consensus 236 ~sK~~~~~G~r~G~~~~ 252 (392)
T 3b1d_A 236 ATKTFNIAGTKNSYAII 252 (392)
Confidence 999998666 87765
No 149
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.81 E-value=5.4e-19 Score=168.34 Aligned_cols=196 Identities=17% Similarity=0.125 Sum_probs=138.9
Q ss_pred EEeecCccCCCCCCHHHHHHHHHhcC-----CCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHH
Q 019931 112 LLFSGNDYLGLSSHPTIAKAAARHGM-----GPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVA 184 (334)
Q Consensus 112 l~f~sn~yLgl~~~p~v~~a~~~~g~-----g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~a 184 (334)
++|..+. .|. .+|.+++++.++-. +..+++.+....+...+++++|++++|.+ .++++++|++|+..++.+
T Consensus 18 i~l~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~ 95 (390)
T 1elu_A 18 TYFNFGG-QGI-LPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWG 95 (390)
T ss_dssp EECCTTT-CCC-CCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHH
T ss_pred EEecCCc-cCC-CCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhC
Confidence 4454554 343 56788887654321 11111112211356789999999999975 688889999999999998
Q ss_pred H-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCCCcEEE
Q 019931 185 V-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTMRKKVV 256 (334)
Q Consensus 185 l-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~~~~lV 256 (334)
+ .++ +|.|++....|.+....+.......|++++.++.+ |+++|++.+++ ++++|
T Consensus 96 ~~~~~--------------gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v 158 (390)
T 1elu_A 96 LDWHQ--------------GDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP---KTRLV 158 (390)
T ss_dssp SCCCT--------------TCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT---TEEEE
T ss_pred CCCCC--------------CCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC---CceEE
Confidence 7 543 78888888888887654321101117888888752 56777776653 78999
Q ss_pred EEcCCCCCCCCccCHHHHHHHHH----HcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcc-cccCCc-cE
Q 019931 257 VTDSLFSMDGDFAPMVELVKLRR----KYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSK-AAGCQG-GF 330 (334)
Q Consensus 257 v~e~v~n~~G~~~pL~~L~ela~----k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsK-a~G~~G-G~ 330 (334)
++++++|++|.+.|+++|.++|+ +||++||+|++|+.|... ..+ . ..++|+++.|++| .+|+.| |+
T Consensus 159 ~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~---~~~----~-~~~~d~~~~s~~K~~~~~~g~G~ 230 (390)
T 1elu_A 159 ILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---LDF----S-RLEVDYYAFTGHKWFAGPAGVGG 230 (390)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBC---CCT----T-TSCCSEEEEESSSTTCCCTTCEE
T ss_pred EEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcC---CCh----h-hcCCCEEEccccccccCCCceEE
Confidence 99999999999999999999999 999999999999865321 111 0 1346899999999 567777 88
Q ss_pred EeeC
Q 019931 331 IACR 334 (334)
Q Consensus 331 i~~~ 334 (334)
++++
T Consensus 231 ~~~~ 234 (390)
T 1elu_A 231 LYIH 234 (390)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7763
No 150
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.81 E-value=2.8e-19 Score=172.25 Aligned_cols=197 Identities=18% Similarity=0.210 Sum_probs=126.5
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHh-----cCCCCccccccCch---HHHHHHHHHHHhHhCCCcEE-EeccHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARH-----GMGPRGSALICGYT---NYHRLLESCLADLKKKEDCL-LCPTGFAANMAV 181 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~-----g~g~~~sr~~~G~~---~~~~~LE~~La~~~g~e~al-v~~sG~~An~~a 181 (334)
+..+++++| .||.|++++.+. +.|.++++.+.+.. ...+.+++++++++|.+... ++++|++|+..+
T Consensus 33 ~~~~~~~n~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a 108 (420)
T 3gbx_A 33 IELIASENY----TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAV 108 (420)
T ss_dssp EECCTTCCC----CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHH
T ss_pred eeeeccCCC----CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHH
Confidence 445677777 499999987543 22444444433322 22334557889999987764 479999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhH-HHHHHhhhcCCcEEEEee-----CCCHHHHHHHHhcCCCCcEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASII-DGIRIAERTKMVEVFVYK-----HCDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~-~g~~ls~~~~g~~v~~~~-----~~D~~~Le~~l~~~~~~~~l 255 (334)
+.+++++ ||.|++..+.|.+.. .+..+.....+...+.++ ..|+++|++++++. ++++
T Consensus 109 ~~~~~~~--------------gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~~ 172 (420)
T 3gbx_A 109 YTALLQP--------------GDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH--KPKM 172 (420)
T ss_dssp HHHHCCT--------------TCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH--CCSE
T ss_pred HHHhcCC--------------CCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc--CCeE
Confidence 9988764 788888888887732 333221111123444443 25999999999752 4788
Q ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc-cCCccEEeeC
Q 019931 256 VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA-GCQGGFIACR 334 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~-G~~GG~i~~~ 334 (334)
|+++++++ |...|+++|+++|++||++||+||+|+.|.++. +. +......+||+++|+||+| |+.||+++++
T Consensus 173 v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~-~~----~~~~~~~~di~~~s~sK~~~g~~gg~~~~~ 245 (420)
T 3gbx_A 173 IIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAA-GV----YPNPVPHAHVVTTTTHKTLAGPRGGLILAK 245 (420)
T ss_dssp EEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHT-TS----SCCSTTTSSEEEEESSGGGCSCSCEEEEES
T ss_pred EEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceec-cc----CCcccccCCEEEeecccCCCCCCceEEEEc
Confidence 88876555 458899999999999999999999998776532 21 1222334789999999999 5679998874
No 151
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=8e-19 Score=174.29 Aligned_cols=195 Identities=17% Similarity=0.127 Sum_probs=140.9
Q ss_pred eEEEeecC-ccCCCCCCHHHHHHHHHh----c-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHH
Q 019931 110 RLLLFSGN-DYLGLSSHPTIAKAAARH----G-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 110 ~~l~f~sn-~yLgl~~~p~v~~a~~~~----g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~ 183 (334)
+++++... + ..+..+|.|.+++..+ . .+...+. ..| .+..+++++++++++|.++++++++|++|+..++.
T Consensus 90 ~~i~l~~g~~-~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g-~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~ 166 (464)
T 1ibj_A 90 LLVNLDNKFD-PFDAMSTPLYQTATFKQPSAIENGPYDYT-RSG-NPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH 166 (464)
T ss_dssp HHTCCCCSSC-TTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTC-CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT
T ss_pred eEEECCCCCC-CCCCCCccHHhhhhhhhhcccccCCcccc-CCC-CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH
Confidence 34555443 3 2344556566644321 1 1222222 234 35789999999999999999999999999887764
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
+++ +||.|++....|.++...+.......|++++.++.+|+++|++++++ ++++|++++++|
T Consensus 167 -~~~--------------~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~---~tk~v~l~~p~N 228 (464)
T 1ibj_A 167 -LIK--------------NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGP---QTKLVWLESPTN 228 (464)
T ss_dssp -TSC--------------TTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCS---SEEEEEECSSCT
T ss_pred -HhC--------------CCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhcc---CceEEEEeCCCC
Confidence 444 37778877777877665432211223889999999999999999864 789999999999
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC----CccEEeeC
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC----QGGFIACR 334 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~----~GG~i~~~ 334 (334)
|+|.+.|+++|+++|++||++||+||+|..|... .. +..++||++.|+||+|++ .+|+++++
T Consensus 229 ptG~v~~l~~i~~la~~~gi~livDea~~~g~~~---~~------~~~~~div~~S~sK~~~g~~Gl~~G~l~~~ 294 (464)
T 1ibj_A 229 PRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS---RP------LELGADIVMHSATKFIAGHSDVMAGVLAVK 294 (464)
T ss_dssp TTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC---CG------GGTTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred CCCEeecHHHHHHHHHHcCCEEEEECCCcccccC---Ch------hhcCCEEEEECCcccccCCCCCcEEEEEEC
Confidence 9999999999999999999999999999875321 01 112478999999999975 35887763
No 152
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.81 E-value=4.2e-19 Score=167.20 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=138.0
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC----cEEEeccHHHHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE----DCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e----~alv~~sG~~An~~ai~al 185 (334)
++++|..+- + ..+|+|++++.+. .+ ++...-..+...++++++++++|.+ .++++++|++|+..++.++
T Consensus 4 ~~~~~~~gp-~--~~~~~v~~a~~~~-~~---~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~ 76 (366)
T 1m32_A 4 NYLLLTPGP-L--TTSRTVKEAMLFD-SC---TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSA 76 (366)
T ss_dssp -CEECSSSS-C--CCCHHHHHTTCCC-CC---TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHS
T ss_pred ccccccCCC-c--CCCHHHHHHHhhh-hc---CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHh
Confidence 467887773 2 3789999987653 11 1110000155689999999999943 4788899999999999987
Q ss_pred hhhhhhccCCCccCCCCCe-EEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEE
Q 019931 186 GNIASLLAGDEKSFKDEKI-AIFSDALNHAS-IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd-~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
..+ +| +|+.+..+|.+ +...+... |.+++.++. .|+++|++++++. .++++|++
T Consensus 77 ~~~--------------gd~vi~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~ 137 (366)
T 1m32_A 77 LGP--------------QDKVLIVSNGAYGARMVEMAGLM----GIAHHAYDCGEVARPDVQAIDAILNAD-PTISHIAM 137 (366)
T ss_dssp CCT--------------TCCEEEEESSHHHHHHHHHHHHH----TCCEEEEECCTTSCCCHHHHHHHHHHC-TTCCEEEE
T ss_pred cCC--------------CCeEEEEeCCCccHHHHHHHHHh----CCceEEEeCCCCCCCCHHHHHHHHhcC-CCeEEEEE
Confidence 654 44 55566678876 33344434 677776663 5899999999863 24788888
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccc-cCCc-cEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~ 333 (334)
.+++||+|.+.|+++|.++|++||++||+|++|+.|... +++. .++|++++|+||++ |+.| |++++
T Consensus 138 ~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~ 206 (366)
T 1m32_A 138 VHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP---------MDIAALHIDYLISSANKCIQGVPGFAFVIA 206 (366)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEEEESSSTTCCCSSEEEEEE
T ss_pred ecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcC---------ccccccCccEEEecCcccccCCCceEEEEE
Confidence 899999999999999999999999999999999865431 1221 24689999999988 6567 88875
No 153
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.80 E-value=3.3e-19 Score=169.26 Aligned_cols=177 Identities=15% Similarity=0.111 Sum_probs=133.0
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCc----EEEeccHHHHHHHHHHHHhhhhhhccCCCccC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKED----CLLCPTGFAANMAVIVAVGNIASLLAGDEKSF 199 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~----alv~~sG~~An~~ai~al~~~~~~~~~~~~~~ 199 (334)
.+|++++++.++..... .....+...++++++++++|.+. ++++++|++|+. ++.++.++
T Consensus 13 ~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~----------- 76 (384)
T 3zrp_A 13 IKEDVLVAGLENNVGFT----SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKP----------- 76 (384)
T ss_dssp CCHHHHHHTTCCSCCTT----SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCT-----------
T ss_pred CCHHHHHHhhccccccc----cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCC-----------
Confidence 47889888876543221 12225677899999999999765 788899999999 88776654
Q ss_pred CCCCeEEEEcCCCchhh--HHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH
Q 019931 200 KDEKIAIFSDALNHASI--IDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV 272 (334)
Q Consensus 200 ~~~gd~Vl~d~~~H~s~--~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~ 272 (334)
+|.|++....|.+. ...+.. .|.+++.++.+ |+++|++++++. ++++|++++++|++|.+.|++
T Consensus 77 ---gd~vi~~~~~~~~~~~~~~~~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~l~ 147 (384)
T 3zrp_A 77 ---NDKILVVSNGVFGDRWEQIFKR----YPVNVKVLRPSPGDYVKPGEVEEEVRKS--EYKLVALTHVETSTGVREPVK 147 (384)
T ss_dssp ---TCEEEEECSSHHHHHHHHHHTT----SSCEEEEECCSTTCCCCHHHHHHHHHHS--CEEEEEEESEETTTTEECCHH
T ss_pred ---CCEEEEecCCcchHHHHHHHHH----cCCcEEEecCCCCCCCCHHHHHHHHHhC--CCcEEEEeCCCCCCceECcHH
Confidence 77777766666542 222222 27888888754 899999999862 589999999999999999999
Q ss_pred HHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCccccc-CCc-cEEeeC
Q 019931 273 ELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAG-CQG-GFIACR 334 (334)
Q Consensus 273 ~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G-~~G-G~i~~~ 334 (334)
+|.++|++||++||+|++|+.+... .++. .++|+++.|++|+++ +.| |+++++
T Consensus 148 ~i~~l~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~ 203 (384)
T 3zrp_A 148 DVINKIRKYVELIVVDGVSSVGAEE---------VKAEEWNVDVYLTASQKALGSAAGLGLLLLS 203 (384)
T ss_dssp HHHHHHGGGEEEEEEECTTTTTTSC---------CCTTTTTCSEEEEETTSTTCCCSSEEEEEEC
T ss_pred HHHHHHHhcCCEEEEECcccccCcc---------ccccccCCCEEEecCcccccCCCceEEEEEC
Confidence 9999999999999999999876431 1121 246899999999995 455 777653
No 154
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.80 E-value=1e-18 Score=164.42 Aligned_cols=200 Identities=18% Similarity=0.159 Sum_probs=147.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
..+++|.+ ++.+ ..+|.+++++.+.-.. +....|..+..+++++++++++|.+ .++++++|++|+..++.++.
T Consensus 13 p~~i~l~~-~~~~-~~~~~v~~a~~~~~~~---~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 87 (359)
T 1svv_A 13 PKPYSFVN-DYSV-GMHPKILDLMARDNMT---QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL 87 (359)
T ss_dssp --CEECSC-SCSS-CCCHHHHHHHHHHTTC---CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC
T ss_pred CeeEEecC-CCcC-CCCHHHHHHHHHHHhh---ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHh
Confidence 34788888 5677 5789999988776443 2223466788899999999999864 47888999999999999886
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHH--HHHhhhcCCcEEEEeeCC----CHHHHHHHHhcC----CCCcEEE
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDG--IRIAERTKMVEVFVYKHC----DMSHLKTLLSCC----TMRKKVV 256 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g--~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~----~~~~~lV 256 (334)
++ ||.|++..+.|.+.... ++.. |.+++.++.+ |+++|++++++. ..++++|
T Consensus 88 ~~--------------gd~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v 149 (359)
T 1svv_A 88 RP--------------WEAVIATQLGHISTHETGAIEAT----GHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLV 149 (359)
T ss_dssp CT--------------TEEEEEETTSHHHHSSTTHHHHT----TCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEE
T ss_pred CC--------------CCEEEEcccchHHHHHHHHHhcC----CCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEE
Confidence 54 78899888888887653 4444 7888888765 599999999762 1137889
Q ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEe
Q 019931 257 VTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 257 v~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+++++ |++|.+.| +++|+++|++||++||+||+|....+|..+... ....+....|+++.|++|..+..| |+++
T Consensus 150 ~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~~K~g~~~~~g~l~ 227 (359)
T 1svv_A 150 YISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIARLTDMFYIGATKAGGMFGEALII 227 (359)
T ss_dssp EEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHHHHCSEEEEECTTTTCSSCEEEEE
T ss_pred EEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhhhcCCEEEEecccCCCCCceEEEE
Confidence 88888 68999988 889999999999999999999321123222111 111111235789999999877666 7776
Q ss_pred e
Q 019931 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
+
T Consensus 228 ~ 228 (359)
T 1svv_A 228 L 228 (359)
T ss_dssp C
T ss_pred E
Confidence 5
No 155
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.80 E-value=1.7e-19 Score=179.64 Aligned_cols=195 Identities=19% Similarity=0.178 Sum_probs=138.7
Q ss_pred eEEEee-cCccCCCCCCHHHHHHHHH-----hcCCCCccccccCchHHHHHHH----HHHHhHhCCCc-----EEEeccH
Q 019931 110 RLLLFS-GNDYLGLSSHPTIAKAAAR-----HGMGPRGSALICGYTNYHRLLE----SCLADLKKKED-----CLLCPTG 174 (334)
Q Consensus 110 ~~l~f~-sn~yLgl~~~p~v~~a~~~-----~g~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~-----alv~~sG 174 (334)
+.|++. |.++ .+|.|++++.+ |..|..+++.+.|. +...++| +++++++|.+. .++++||
T Consensus 45 ~~i~L~a~e~~----~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~-~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sG 119 (483)
T 1rv3_A 45 VGLELIASENF----ASRAVLEALGSCLNNKYSLGYPGQRYYGGT-EHIDELETLCQKRALQAYGLDPQCWGVNVQPYSG 119 (483)
T ss_dssp SSEECCTTCCC----CCHHHHHHHTSGGGTCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSH
T ss_pred cCeEEEcCCCC----CCHHHHHHHHHHHhccCcccCCCccccCcc-hhHHHHHHHHHHHHHHHhCCCcccCceEEEECCc
Confidence 345653 3343 48999997754 33344455555543 4445555 88899999763 3788999
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHH--------HHHHhhhcCCcEEEEeeC------CCHH
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIID--------GIRIAERTKMVEVFVYKH------CDMS 240 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~--------g~~ls~~~~g~~v~~~~~------~D~~ 240 (334)
++||..++.+++++ ||.|++..+.|.+... ++.++.. ..+++.++. .|++
T Consensus 120 s~an~~~~~all~p--------------GD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~--~~~~v~~~~~~~~~~iD~d 183 (483)
T 1rv3_A 120 SPANFAVYTALVEP--------------HGRIMGLDLPDGGHLTHGFMTDKKKISATSI--FFESMAYKVNPDTGYIDYD 183 (483)
T ss_dssp HHHHHHHHHHHTCT--------------TCEEEEECGGGTCCGGGCCBCSSCBCSHHHH--HSEEEEECBCTTTCSBCHH
T ss_pred HHHHHHHHHHhcCC--------------CCEEEEecCccCcCcchhhhhcccCcccccc--eEEEEECccccCCCcCCHH
Confidence 99999999988765 8889988888877542 2222210 145666632 4899
Q ss_pred HHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC
Q 019931 241 HLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL 320 (334)
Q Consensus 241 ~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl 320 (334)
+|++++++ +++++|++ +++|+. .+.|+++|+++|+++|++||+|+||..|++.. +.. ....+++||++.|+
T Consensus 184 ~le~~i~~--~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~---~~~--~~p~~~~div~~s~ 254 (483)
T 1rv3_A 184 RLEENARL--FHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA---GVV--PSPFEHCHVVTTTT 254 (483)
T ss_dssp HHHHHHHH--HCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH---TSS--CCGGGTCSEEEEES
T ss_pred HHHHHHhh--cCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc---CCC--CCCCCCCcEEEecC
Confidence 99999973 26788888 888887 88999999999999999999999999876521 111 11113579999999
Q ss_pred cccc-cCCccEEeeC
Q 019931 321 SKAA-GCQGGFIACR 334 (334)
Q Consensus 321 sKa~-G~~GG~i~~~ 334 (334)
||+| |..||+|+++
T Consensus 255 ~K~l~GprgG~i~~~ 269 (483)
T 1rv3_A 255 HKTLRGCRAGMIFYR 269 (483)
T ss_dssp SGGGCCCSCEEEEEE
T ss_pred cccCCCCCceEEEEc
Confidence 9999 6689999863
No 156
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=1.8e-19 Score=175.34 Aligned_cols=202 Identities=12% Similarity=-0.046 Sum_probs=143.9
Q ss_pred eeEEEeecCccCCCCCCHHH--HHHHHHhc-C-CCCccccccCchHHHHHHHHHHHhHh-----CC--Cc---EEEeccH
Q 019931 109 KRLLLFSGNDYLGLSSHPTI--AKAAARHG-M-GPRGSALICGYTNYHRLLESCLADLK-----KK--ED---CLLCPTG 174 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v--~~a~~~~g-~-g~~~sr~~~G~~~~~~~LE~~La~~~-----g~--e~---alv~~sG 174 (334)
++++||+++++..+..+|.+ ++++.+.- . +..++....| ..+|++++++++ +. +. ++++++|
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~ 122 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQG----IEELRDLWQQKMLRDNPELSIDNMSRPIVTNAL 122 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTC----CHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCC----CHHHHHHHHHHHhccCcccCCCccceEEEcCCc
Confidence 56899999986233346666 66543321 1 1111211222 467888888887 54 56 7888899
Q ss_pred HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHH-hhhcCCcEEEEeeC------CCHHHHHHHHh
Q 019931 175 FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRI-AERTKMVEVFVYKH------CDMSHLKTLLS 247 (334)
Q Consensus 175 ~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~l-s~~~~g~~v~~~~~------~D~~~Le~~l~ 247 (334)
++|+..++.+++++ ||.|++..+.|......++. . |.+++.++. .|+++|+++++
T Consensus 123 ~~al~~~~~~l~~~--------------gd~Vl~~~p~y~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~l~ 184 (430)
T 2x5f_A 123 THGLSLVGDLFVNQ--------------DDTILLPEHNWGNYKLVFNTRN----GANLQTYPIFDKDGHYTTDSLVEALQ 184 (430)
T ss_dssp HHHHHHHHHHHCCT--------------TCEEEEESSCCTHHHHHHTTTT----CCEEEEECCBCTTSCBCSHHHHHHHH
T ss_pred hHHHHHHHHHHhCC--------------CCEEEEcCCcCccHHHHHHHhc----CCeEEEEeccCccCCcCHHHHHHHHH
Confidence 99999999988764 78888888888887777665 4 788887764 37899999997
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHH-----cCCEEEEecCcccccccCCC-cccc-cccCCCCCc---c
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRK-----YGFLLVLDDAHGTFVCGKNG-GGVA-EQFNCERDV---D 314 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k-----~ga~LivDeAh~~Gv~G~~G-~g~~-~~~~~~~~~---D 314 (334)
+.++++++|++.+++||+|.+.| +++|+++|++ ||+++|+||+|+.+.++..+ ..+. ...+. .+. +
T Consensus 185 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 263 (430)
T 2x5f_A 185 SYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNL-HSNAILP 263 (430)
T ss_dssp HCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTT-CCTTEEE
T ss_pred hcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhc-cCCcceE
Confidence 64446788888999999999988 8899999999 99999999999976554221 1111 11121 234 6
Q ss_pred EEEecCcccccCCc---cEEee
Q 019931 315 ICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 315 iv~~SlsKa~G~~G---G~i~~ 333 (334)
|+++||||+||+.| ||+++
T Consensus 264 i~~~s~sK~~~~~G~riG~~~~ 285 (430)
T 2x5f_A 264 IRLDGATKEFFAWGFRVGFMTF 285 (430)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEE
T ss_pred EEEEecccCCCCCCCCeEEEEE
Confidence 88999999998766 88876
No 157
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.80 E-value=6.1e-19 Score=173.19 Aligned_cols=201 Identities=12% Similarity=0.088 Sum_probs=138.4
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al 185 (334)
.|+.|+||.++-.. |.|++++.+. ..+.. .++..+...+|+++++++++.+++++++||++||..+++++
T Consensus 41 ~g~~ylD~~~~~~~-----~~v~~a~~~~~~~~~~----~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~ 111 (467)
T 1ax4_A 41 SSAVYIDLLTDSGT-----NAMSDHQWAAMITGDE----AYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVL 111 (467)
T ss_dssp GGGCSEECSCSSSC-----CCEEHHHHHHHHTCCC----CSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHH
T ss_pred CCceeeecccCcCC-----HHHHHHHHHHHhhccc----ccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHH
Confidence 45788998665322 6666655443 23321 23345667899999999999999999999999999999988
Q ss_pred hh----hhhhccCCCccCCCCCeE---EEEcCCCchhhHHHHHHhhhcCCcEEEEee---------------CCCHHHHH
Q 019931 186 GN----IASLLAGDEKSFKDEKIA---IFSDALNHASIIDGIRIAERTKMVEVFVYK---------------HCDMSHLK 243 (334)
Q Consensus 186 ~~----~~~~~~~~~~~~~~~gd~---Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~---------------~~D~~~Le 243 (334)
.. + ||. |++....|.+....+... +.+++... ..|+++||
T Consensus 112 ~~~~~~~--------------Gd~~~~viv~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 173 (467)
T 1ax4_A 112 LKYKQKE--------------GKAKNPVFISNFHFDTTAAHVELN----GCKAINIVTEKAFDSETYDDWKGDFDIKKLK 173 (467)
T ss_dssp HHHHHHT--------------TCCSSCEEEESSCCHHHHHHHHHT----TCEEEECBCGGGGCTTSCCTTTTCBCHHHHH
T ss_pred HHhhccC--------------CCccceEEEeccccchhhHHHhcc----CCceecccccccccccccCCcccccCHHHHH
Confidence 76 4 453 444444445555555555 66665431 13899999
Q ss_pred HHHhcCC-CCcEEEEEcCCCCCC-CCccC---HHHHHHHHHHcCCEEEEecCccc-ccc-------cCCCccccccc-CC
Q 019931 244 TLLSCCT-MRKKVVVTDSLFSMD-GDFAP---MVELVKLRRKYGFLLVLDDAHGT-FVC-------GKNGGGVAEQF-NC 309 (334)
Q Consensus 244 ~~l~~~~-~~~~lVv~e~v~n~~-G~~~p---L~~L~ela~k~ga~LivDeAh~~-Gv~-------G~~G~g~~~~~-~~ 309 (334)
+++++.+ .++++|++++++|++ |.+.| +++|+++|++||++||+|++|.. +.+ +..|..+.... ..
T Consensus 174 ~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (467)
T 1ax4_A 174 ENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM 253 (467)
T ss_dssp HHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHH
T ss_pred HHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhh
Confidence 9997532 258999999999998 77655 78999999999999999999876 322 22222111100 00
Q ss_pred CCCccEEEecCcccccCC-ccEEeeC
Q 019931 310 ERDVDICVGTLSKAAGCQ-GGFIACR 334 (334)
Q Consensus 310 ~~~~Div~~SlsKa~G~~-GG~i~~~ 334 (334)
...+|+++.|+||++|+. ||+++++
T Consensus 254 ~~~~d~~~~s~sK~~g~~~Gg~~~~~ 279 (467)
T 1ax4_A 254 YKYADALTMSAKKDPLLNIGGLVAIR 279 (467)
T ss_dssp GGGCSEEEEETTSTTCCSSCEEEEES
T ss_pred ccccceEEEeccccCCCCcceEEEeC
Confidence 023578889999999885 8888753
No 158
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.80 E-value=1.2e-18 Score=169.27 Aligned_cols=209 Identities=15% Similarity=0.104 Sum_probs=145.1
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc---CCCCcc--ccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG---MGPRGS--ALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMA 180 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g---~g~~~s--r~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ 180 (334)
+..|+|+.++. ..+|.+++++.++- .+...+ ....+..+...+++++|++++|.+ .++++++|++|+..
T Consensus 18 ~~~~Ld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~ 93 (432)
T 3a9z_A 18 RKVYMDYNATT----PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNL 93 (432)
T ss_dssp CCEECBTTTCC----CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHH
T ss_pred CcEEeeCCccC----CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHH
Confidence 35666766654 45899999776532 121111 111123456789999999999974 67888889999999
Q ss_pred HHHHHhh--------hhh-h-ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHH
Q 019931 181 VIVAVGN--------IAS-L-LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKT 244 (334)
Q Consensus 181 ai~al~~--------~~~-~-~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~ 244 (334)
++.++.+ +++ + +...... ..+.|+++...|.++..++.......|.+++.++. .|+++|++
T Consensus 94 ~~~~~~~~~~~~~~~~gd~vl~~~p~y~---~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~ 170 (432)
T 3a9z_A 94 VIHSTVRCFHEQQTLQGRTVDQISPEEG---TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILA 170 (432)
T ss_dssp HHHHHHHHHHHHHHHC---------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHH
T ss_pred HHHHHHhhhhhccccCCccccccccccc---cCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHH
Confidence 9998752 321 0 0000000 11567888889999877765432223788888775 27888888
Q ss_pred HHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC----------CEEEEecCcccccccCCCcccccccCCCCCcc
Q 019931 245 LLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG----------FLLVLDDAHGTFVCGKNGGGVAEQFNCERDVD 314 (334)
Q Consensus 245 ~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g----------a~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~D 314 (334)
++++ ++++|++++++|++|.+.|+++|.++|+++| ++||+|++|+.|.. ...+. . .++|
T Consensus 171 ~i~~---~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~~~~---~--~~~d 239 (432)
T 3a9z_A 171 AVRP---TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RVDVE---D--LGVD 239 (432)
T ss_dssp TCCT---TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CCCHH---H--HCCS
T ss_pred hccC---CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc---ccChh---h--cCCC
Confidence 7753 7899999999999999999999999999999 99999999986521 11111 1 1357
Q ss_pred EEEecCcccccCCccEEeeC
Q 019931 315 ICVGTLSKAAGCQGGFIACR 334 (334)
Q Consensus 315 iv~~SlsKa~G~~GG~i~~~ 334 (334)
+++.|+||.+|...||++++
T Consensus 240 ~~~~s~~K~~g~~~G~~~~~ 259 (432)
T 3a9z_A 240 FLTIVGHKFYGPRIGALYVR 259 (432)
T ss_dssp EEEEEGGGTTCCSCEEEEET
T ss_pred EEEEehhHhcCCcceEEEEc
Confidence 99999999998777888763
No 159
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.80 E-value=1.8e-18 Score=163.45 Aligned_cols=194 Identities=18% Similarity=0.108 Sum_probs=139.8
Q ss_pred ccceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHH
Q 019931 106 RQFKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 106 ~~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~ 183 (334)
.+|+++|||++|+ ..+..+|++++++.+.-..... ++... ..+|+++++++++.+ .++++++|++|+..++.
T Consensus 12 ~~g~~~id~~~~~-~~~~~~~~v~~a~~~~~~~~~~----y~~~~-~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 12 PLSSEIVNFSTTV-WTDGDKDHLEKHLVENLNCIRH----YPEPD-AGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp ----CCEECSCCS-CCCSCCHHHHHHHHHTGGGGGS----CCCTT-CHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHH
T ss_pred hccccEEEccCCC-CCCCCCHHHHHHHHHhHhHHhc----CCCCc-HHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 4568999999985 3555789999988764321111 11112 268999999999864 68888999999999888
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-CCHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-CDMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-~D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
++. +|.|++..+.|..+...++.. |++++.++. ++.+.+.. +++++|++++++
T Consensus 86 ~l~----------------gd~Vi~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~------~~~~~v~i~~p~ 139 (350)
T 3fkd_A 86 AFR----------------GSRSLIAIPSFAEYEDACRMY----EHEVCFYPSNEDIGEADF------SNMDFCWLCNPN 139 (350)
T ss_dssp HTT----------------TCEEEEEESCCHHHHHHHHHT----TCEEEEEETTSCGGGSCC------TTCSEEEEESSC
T ss_pred HHC----------------CCEEEEeCCCcHHHHHHHHHc----CCeEEEEecCCccccCcc------CCCCEEEEeCCC
Confidence 764 466777778888888777766 899999988 54333321 368888899999
Q ss_pred CCCCCccCHHHHHHHHHHcC-CEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 263 SMDGDFAPMVELVKLRRKYG-FLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~g-a~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
||+|.+.|+++|.++++.++ .+||+||+|+... ..+.......+ ..+.+|++.||||++|+.| ||++++
T Consensus 140 nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~--~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~ 212 (350)
T 3fkd_A 140 NPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFT--TEEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVAN 212 (350)
T ss_dssp TTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSC--SSCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEECC
T ss_pred CCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhc--cCcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEeC
Confidence 99999999999999999886 7999999998643 32332222222 2344689999999998655 888753
No 160
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.80 E-value=1.9e-18 Score=166.62 Aligned_cols=195 Identities=16% Similarity=0.065 Sum_probs=140.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC---CCCcc--ccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM---GPRGS--ALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~---g~~~s--r~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~a 181 (334)
..|+|+.++ + ..+|.|++++.++-. +.... +...|..+...++++++++++|.+ .++++++|++++..+
T Consensus 29 ~~yld~~~~---~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~a 104 (416)
T 1qz9_A 29 VIYLDGNSL---G-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKV 104 (416)
T ss_dssp CEECCTTTS---C-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHH
T ss_pred eEeecCCCc---C-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHH
Confidence 667777654 3 457888887765421 21111 112244567789999999999974 677778888888888
Q ss_pred HHHHh------hhhhhccCCCccCCCCCe-EEEEcCCCchhhHHHHHHhhhc--CCcEEEEeeCCCHHHHHHHHhcCCCC
Q 019931 182 IVAVG------NIASLLAGDEKSFKDEKI-AIFSDALNHASIIDGIRIAERT--KMVEVFVYKHCDMSHLKTLLSCCTMR 252 (334)
Q Consensus 182 i~al~------~~~~~~~~~~~~~~~~gd-~Vl~d~~~H~s~~~g~~ls~~~--~g~~v~~~~~~D~~~Le~~l~~~~~~ 252 (334)
+.++. .+ || +|+.+..+|.++...+...... .|++++.++. +++|++++++ +
T Consensus 105 l~~~~~~~~~~~~--------------gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~l~~~i~~---~ 165 (416)
T 1qz9_A 105 LSAALRVQATRSP--------------ERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--PEELPQAIDQ---D 165 (416)
T ss_dssp HHHHHHHHHHHST--------------TCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--GGGHHHHCST---T
T ss_pred HHhhcccccccCC--------------CCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--HHHHHHHhCC---C
Confidence 88765 33 44 6778888998876655422111 1678888877 8899988864 7
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-C-Cc-c
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-C-QG-G 329 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~-~G-G 329 (334)
+++|++++++|++|.+.|+++|.++|++||++||+|++|++|... ..+ ..+ ++|+++.|++|.++ + .+ |
T Consensus 166 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~-~~~----~~d~~~~s~~K~l~~g~~~~g 237 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVP---VDL-HQA----GADYAIGCTYKYLNGGPGSQA 237 (416)
T ss_dssp EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---CCH-HHH----TCSEEEECSSSTTCCCTTCCC
T ss_pred ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcC---CCh-hhc----CCCEEEecCcccCCCCCCCeE
Confidence 899999999999999999999999999999999999999865321 111 111 36899999999973 3 44 7
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
+++++
T Consensus 238 ~l~~~ 242 (416)
T 1qz9_A 238 FVWVS 242 (416)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77653
No 161
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.79 E-value=8.9e-19 Score=167.78 Aligned_cols=175 Identities=17% Similarity=0.106 Sum_probs=134.1
Q ss_pred CHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCC
Q 019931 125 HPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDE 202 (334)
Q Consensus 125 ~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~ 202 (334)
.|++++++.+.- .+. +.++..+...+||+++++++|.++.++++||++|+..++.++ .++
T Consensus 16 ~~~~~~a~~~~l~~~~----~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~-------------- 77 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ----WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGP-------------- 77 (388)
T ss_dssp CHHHHHHHHHHHHTSC----CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCT--------------
T ss_pred CHHHHHHHHHHHHcCC----eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCC--------------
Confidence 388888776542 221 112234667899999999999988999999999999999987 443
Q ss_pred CeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHH
Q 019931 203 KIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVK 276 (334)
Q Consensus 203 gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~e 276 (334)
||.|++..+.|.++...++.. |++++.++.+ |+++|++++++ ++++|+ ++|++|.+.|+++|.+
T Consensus 78 gd~Vi~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~---~~n~tG~~~~l~~i~~ 147 (388)
T 1b9h_A 78 GTEVIVPAFTFISSSQAAQRL----GAVTVPVDVDAATYNLDPEAVAAAVTP---RTKVIM---PVHMAGLMADMDALAK 147 (388)
T ss_dssp TCEEEEESSSCTHHHHHHHHT----TCEEEEECBCTTTCCBCHHHHHHHCCT---TEEEEC---CBCGGGCCCCHHHHHH
T ss_pred cCEEEECCCccHHHHHHHHHc----CCEEEEEecCCCcCCCCHHHHHHhcCc---CceEEE---EeCCccCcCCHHHHHH
Confidence 788888889999988887766 8888888752 78999988863 678877 7889999999999999
Q ss_pred HHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--ccc-cCCccEEeeC
Q 019931 277 LRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAA-GCQGGFIACR 334 (334)
Q Consensus 277 la~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~-G~~GG~i~~~ 334 (334)
+|++||++||+|++|+.|... .|..+. .+ + |+.+.||| |.+ |..||+++++
T Consensus 148 la~~~~~~li~D~a~~~g~~~-~~~~~~-~~---~--~i~~~S~s~~K~l~g~~~G~~~~~ 201 (388)
T 1b9h_A 148 ISADTGVPLLQDAAHAHGARW-QGKRVG-EL---D--SIATFSFQNGKLMTAGEGGAVVFP 201 (388)
T ss_dssp HHHHHTCCBCEECTTCTTCEE-TTEEGG-GS---S--SCEEEECCTTSSSCSSSCEEEEEC
T ss_pred HHHHcCCEEEEecchhcCCcc-CCeecc-cc---c--ceEEEEccCCCcccCCCeEEEEEC
Confidence 999999999999999987432 222211 11 2 57788888 666 4477888763
No 162
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.79 E-value=1.1e-18 Score=166.82 Aligned_cols=193 Identities=13% Similarity=0.035 Sum_probs=139.1
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
..|+|..+. ...+|.+++++.++.... + .........++++++++++|.+ .++++++|++|+..++.++.
T Consensus 9 ~~yl~~~~~----~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 9 PVITLTAGP----VNAYPEVLRGLGRTVLYD---Y-DPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp CSEECSSSC----CCCCHHHHHHTTSCCCCT---T-SHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred cceeecCCC----cCCCHHHHHHHhcccccc---c-cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc
Confidence 345554432 245799999887654321 1 1223456789999999999964 67777999999999999886
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
++ ||.|++....|.+.. ...+... .|.+++.++. .|+++|++++++. +++++|+++++
T Consensus 81 ~~--------------gd~Vl~~~~~~~~~~-~~~~~~~-~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~ 143 (392)
T 2z9v_A 81 SP--------------DDVVLNLASGVYGKG-FGYWAKR-YSPHLLEIEVPYNEAIDPQAVADMLKAH-PEITVVSVCHH 143 (392)
T ss_dssp CT--------------TCCEEEEESSHHHHH-HHHHHHH-HCSCEEEEECCTTSCCCHHHHHHHHHHC-TTCCEEEEESE
T ss_pred CC--------------CCEEEEecCCcccHH-HHHHHHH-cCCceEEeeCCCCCCCCHHHHHHHHhcC-CCCcEEEEecc
Confidence 54 677887777777653 2222211 1677777764 4899999999642 26789999999
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~~ 334 (334)
+|++|.+.|+++|.++|++||+++|+|++|+.|... ..+ .. .++|++++|+||+++ +.| |+++++
T Consensus 144 ~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~-~~----~~~d~~~~s~sK~~~~~~g~G~l~~~ 210 (392)
T 2z9v_A 144 DTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMK---THP-ED----CKADIYVTGPNKCLGAPPGLTMMGVS 210 (392)
T ss_dssp EGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBS---CCG-GG----GTCSEEEECSSSTTCCCSCCEEEEEC
T ss_pred CCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcc---ccc-cc----ccceEEEecCcccccCCCceeEEEEC
Confidence 999999999999999999999999999999865321 111 11 146899999999764 456 777653
No 163
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.79 E-value=1.8e-18 Score=166.16 Aligned_cols=177 Identities=16% Similarity=0.147 Sum_probs=134.9
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCc---EEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKED---CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~---alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
-+|++++++.+...+.. .........++++++++++|.+. +++++||++|+..++.++.++
T Consensus 24 ~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~------------ 87 (411)
T 3nnk_A 24 ADPRVLRAMSSQLIGQY----DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRP------------ 87 (411)
T ss_dssp CCHHHHHHHTSCCCCTT----CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCT------------
T ss_pred CCHHHHHHhhccccccc----cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCC------------
Confidence 47999998876432211 12234667899999999999653 345578899999999988764
Q ss_pred CCCeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
+|.|++....|.+ +...+... +.+++.++.+ |+++|++++++. ++++|++++++|++|.+.|+++
T Consensus 88 --gd~Vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~l~~ 159 (411)
T 3nnk_A 88 --GDKVLVPVFGRFGHLLCEIARRC----RAEVHTIEVPWGEVFTPDQVEDAVKRI--RPRLLLTVQGDTSTTMLQPLAE 159 (411)
T ss_dssp --TCEEEEEECSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECCCTT
T ss_pred --CCEEEEecCCchHHHHHHHHHHc----CCeEEEEecCCCCCCCHHHHHHHHhhC--CCeEEEEeCCCCCcceeccHHH
Confidence 7788887777766 55555544 7888888765 899999999752 6789999999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccc-cCCc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAA-GCQG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~-G~~G-G~i~~ 333 (334)
|.++|++||++||+|++|+.+... +.+ ..++|+++.|++|++ |..| |++++
T Consensus 160 i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~ 213 (411)
T 3nnk_A 160 LGEICRRYDALFYTDATASLGGNP---------LETDVWGLDAVSAGMQKCLGGPSGTSPITL 213 (411)
T ss_dssp HHHHHHHHTCEEEEECTTTBTTBC---------CCTTTTTCSEEECCSTTTTCCCSSEEEEEE
T ss_pred HHHHHHHcCCEEEEECCcccCCcc---------cchhccCCcEEEecCccccCCCCceEEEEE
Confidence 999999999999999999865331 111 135789999999985 5555 77665
No 164
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.79 E-value=2e-18 Score=165.00 Aligned_cols=182 Identities=14% Similarity=0.062 Sum_probs=134.1
Q ss_pred CCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 122 LSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 122 l~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
+..+|.+++++.++-.+. ......+...++++++++++|.+ .++++++|++|+..++.++.++
T Consensus 28 ~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~---------- 93 (393)
T 2huf_A 28 SNAPQRVLDAMSRPILGH----LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLED---------- 93 (393)
T ss_dssp CCCCHHHHHHTTSCCCCT----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCT----------
T ss_pred CCCCHHHHHHHHhhhccC----CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCC----------
Confidence 456899999887654331 11112466789999999999975 3566699999999999988654
Q ss_pred CCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 199 FKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 199 ~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++....|.+.. ...+.. ..|.+++.++. .|+++|++++++. ++++|++++++|++|.+.|+++
T Consensus 94 ----gd~vl~~~~~~~~~~-~~~~~~-~~g~~~~~v~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~l~~ 165 (393)
T 2huf_A 94 ----GDVILIGHTGHWGDR-SADMAT-RYGADVRVVKSKVGQSLSLDEIRDALLIH--KPSVLFLTQGDSSTGVLQGLEG 165 (393)
T ss_dssp ----TCEEEEEESSHHHHH-HHHHHH-HTTCEEEEEECCTTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECCCTT
T ss_pred ----CCEEEEECCCcchHH-HHHHHH-HcCCeeEEEeCCCCCCCCHHHHHHHHhcc--CCcEEEEEccCCCccccCCHHH
Confidence 677777777776632 222221 12778888773 5899999998742 5788999999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccc-cCCc-cEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~~ 334 (334)
|.++|++||++||+|++|++|.. . .++. .++|+++.|+||++ |+.| |+++++
T Consensus 166 i~~~~~~~~~~li~D~a~~~~~~---~------~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~ 220 (393)
T 2huf_A 166 VGALCHQHNCLLIVDTVASLGGA---P------MFMDRWEIDAMYTGSQKVLGAPPGITPVSFS 220 (393)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTB---C------CCTTTTTCSEEECCSSSTTCCCSSCEEEEEC
T ss_pred HHHHHHHcCCEEEEEcccccCCC---C------cchhhcCccEEEECCCcccccCCCeEEEEEC
Confidence 99999999999999999986532 1 1111 24689999999986 4555 777653
No 165
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.79 E-value=7.5e-19 Score=182.32 Aligned_cols=160 Identities=14% Similarity=0.073 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
..+.++|+++|+++|+++++++++| ++||.+++.+++++ ||.|++++++|.|+.++++++ |
T Consensus 195 g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~p--------------GD~VLv~r~~H~S~~~~l~ls----G 256 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPA--------------GSTILIDRNCHKSLTHLMMMS----D 256 (715)
T ss_dssp THHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCT--------------TCEEEEESSCCHHHHHHHHHS----C
T ss_pred HHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCC--------------CCEEEECCCccHHHHHHHHHc----C
Confidence 4578999999999999999999888 58999999998875 899999999999999999988 8
Q ss_pred cEEEEeeCC---------------CHHHHHHHHhcCCC--CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCc
Q 019931 229 VEVFVYKHC---------------DMSHLKTLLSCCTM--RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 229 ~~v~~~~~~---------------D~~~Le~~l~~~~~--~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh 291 (334)
++++.++.. |+++|++++++.+. .+++|++.++ |++|.+.|+++|.++|++++ |++||||
T Consensus 257 a~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH 333 (715)
T 3n75_A 257 VTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAW 333 (715)
T ss_dssp CEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTT
T ss_pred CEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEcccc
Confidence 888877631 79999999986431 1235555555 89999999999999998774 7999999
Q ss_pred cccc-ccCCCcccccccCCCC--CccEE---EecCcccccC--CccEEee
Q 019931 292 GTFV-CGKNGGGVAEQFNCER--DVDIC---VGTLSKAAGC--QGGFIAC 333 (334)
Q Consensus 292 ~~Gv-~G~~G~g~~~~~~~~~--~~Div---~~SlsKa~G~--~GG~i~~ 333 (334)
+.++ +++.+.+. ..+.. ++|++ ++|+||++++ .||++.+
T Consensus 334 ~~~~~f~~~~~~~---~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v 380 (715)
T 3n75_A 334 VPYTNFSPIYEGK---CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHV 380 (715)
T ss_dssp CTTGGGSGGGTTS---STTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEE
T ss_pred ccccccCCccccc---cccccCcCCCEEEEEEecccccccCCCCeeEEEe
Confidence 9875 44432222 11221 24654 9999999987 5788865
No 166
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.79 E-value=1.3e-18 Score=169.22 Aligned_cols=202 Identities=14% Similarity=0.092 Sum_probs=137.0
Q ss_pred eeEEEeecCc-cCCCCCCHHHHHHHHHhcC------C--CCccccccCchHHHHHHHHHHHhHhC----------CCcEE
Q 019931 109 KRLLLFSGND-YLGLSSHPTIAKAAARHGM------G--PRGSALICGYTNYHRLLESCLADLKK----------KEDCL 169 (334)
Q Consensus 109 ~~~l~f~sn~-yLgl~~~p~v~~a~~~~g~------g--~~~sr~~~G~~~~~~~LE~~La~~~g----------~e~al 169 (334)
+.+++|.+|. .+ .+|.+.+++.+.-. + ....-..++......+|+++++++++ .+.++
T Consensus 36 ~~~i~l~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~ 112 (428)
T 1iay_A 36 NGVIQMGLAENQL---CLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVV 112 (428)
T ss_dssp TSBEECSSCCCCS---SHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCE
T ss_pred Cceeeeccccchh---hHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEE
Confidence 3578998864 33 35677777764321 0 00000111111113567777777765 35677
Q ss_pred EeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHH-HhhhcCCcEEEEeeCC-------CHHH
Q 019931 170 LCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIR-IAERTKMVEVFVYKHC-------DMSH 241 (334)
Q Consensus 170 v~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~-ls~~~~g~~v~~~~~~-------D~~~ 241 (334)
+++++++++..++.+++.+ ||.|++..+.|.+....+. .. |.+++.++.+ |+++
T Consensus 113 ~~~G~~~ai~~~~~~~~~~--------------gd~Vl~~~p~y~~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~ 174 (428)
T 1iay_A 113 MAGGATGANETIIFCLADP--------------GDAFLVPSPYYPAFNRDLRWRT----GVQLIPIHCESSNNFKITSKA 174 (428)
T ss_dssp EEEHHHHHHHHHHHHHCCT--------------TCEEEEESSCCTTHHHHTTTTT----CCEEEEECCCTTTTTCCCHHH
T ss_pred EccChHHHHHHHHHHhCCC--------------CCeEEEccCCCcchHHHHHHhc----CCEEEEeecCCccCCcCCHHH
Confidence 7788889999999988764 7888888888877665443 33 7888888752 7899
Q ss_pred HHHHHhcC---CCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCC---
Q 019931 242 LKTLLSCC---TMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERD--- 312 (334)
Q Consensus 242 Le~~l~~~---~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~--- 312 (334)
|++++++. ..++++|++++++||+|.+.| +++|+++|++||++||+||+|+.+.++ +........+...
T Consensus 175 l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~--~~~~~~~~~~~~~~~~ 252 (428)
T 1iay_A 175 VKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD--TPQFVSIAEILDEQEM 252 (428)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS--SSCCCCHHHHHTSGGG
T ss_pred HHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC--CCCccCHHHhcccccc
Confidence 99988642 236888888999999999999 999999999999999999999975553 2221111111111
Q ss_pred ----cc--EEEecCcccccCCc---cEEee
Q 019931 313 ----VD--ICVGTLSKAAGCQG---GFIAC 333 (334)
Q Consensus 313 ----~D--iv~~SlsKa~G~~G---G~i~~ 333 (334)
.| |++.||||+||+.| |++++
T Consensus 253 ~~~~~d~viv~~s~sK~~g~~Glr~G~~~~ 282 (428)
T 1iay_A 253 TYCNKDLVHIVYSLSKDMGLPGFRVGIIYS 282 (428)
T ss_dssp TTSCTTSEEEEEESTTTSSCGGGCEEEEEE
T ss_pred ccCCCCcEEEEecchhhcCCCCceEEEEEe
Confidence 34 88999999998766 88775
No 167
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.78 E-value=2.2e-18 Score=165.68 Aligned_cols=177 Identities=15% Similarity=0.134 Sum_probs=133.2
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCc--EE-EeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKED--CL-LCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~--al-v~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
-+|++++++.+...+. ......+...++++++++++|.+. .+ +++||++|+..++.++.++
T Consensus 22 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~------------ 85 (416)
T 3isl_A 22 VDPRVLRVMSTPVVGQ----FDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEP------------ 85 (416)
T ss_dssp CCHHHHHHTTSCCCCT----TSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCT------------
T ss_pred cCHHHHHHhcccCCCC----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCC------------
Confidence 3677777776633221 112225667999999999999754 34 5588899999999988654
Q ss_pred CCCeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++....|.+ +...++.. |.+++.++.+ |+++|++++++ +++++|++++++|++|.+.|+++
T Consensus 86 --gd~Vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~~--~~~~~v~~~~~~nptG~~~~l~~ 157 (416)
T 3isl_A 86 --EDDVLIPIYGRFGYLLTEIAERY----GANVHMLECEWGTVFDPEDIIREIKK--VKPKIVAMVHGETSTGRIHPLKA 157 (416)
T ss_dssp --TCEEEEEESSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCHHHHHHHHHH--HCCSEEEEESEETTTTEECCCHH
T ss_pred --CCEEEEecCCcccHHHHHHHHhc----CCeeEEEecCCCCCCCHHHHHHHHhh--CCCcEEEEEccCCCCceecCHHH
Confidence 7778877777776 44444444 7888888765 89999999974 26789999999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccc-cCCc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAA-GCQG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~-G~~G-G~i~~ 333 (334)
|.++|++||++||+|++|+.|.+. +++ ..++|+++.|++|++ |+.| |++++
T Consensus 158 i~~l~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~ 211 (416)
T 3isl_A 158 IGEACRTEDALFIVDAVATIGGCE---------VKVDEWKIDAAIGGTQKCLSVPSGMAPITY 211 (416)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCCCSSEEEEEE
T ss_pred HHHHHHHcCCEEEEECCccccCCC---------cchhhcCCCEEEecCccccCCCCCeEEEEE
Confidence 999999999999999999876431 111 134789999999985 5555 66654
No 168
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.78 E-value=2.2e-18 Score=169.49 Aligned_cols=200 Identities=15% Similarity=0.079 Sum_probs=139.9
Q ss_pred eEEEeecCccCCCCCCHH----HHHHHHHhc----CCCCccccccCchHHHHHHHHHHHhHh-CC-------CcEEE--e
Q 019931 110 RLLLFSGNDYLGLSSHPT----IAKAAARHG----MGPRGSALICGYTNYHRLLESCLADLK-KK-------EDCLL--C 171 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~----v~~a~~~~g----~g~~~sr~~~G~~~~~~~LE~~La~~~-g~-------e~alv--~ 171 (334)
..+||+.++|++...+|. ++++++++. .+...+....|. .++++++++++ |. +++++ +
T Consensus 50 ~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~----~~lr~~ia~~l~g~~~~~~~~~~i~~~~t 125 (448)
T 3meb_A 50 KKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGF----PLFLEAAQFLMFGKDSKAAQEGRIASCQS 125 (448)
T ss_dssp TCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCC----HHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred CeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcch----HHHHHHHHHHhcCCCccccCcCcEEEEEC
Confidence 369999999999876644 444544443 333444444554 55667777765 64 46778 8
Q ss_pred ccHHHHHHHH--HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHH----HhhhcCCcEEEEeeC---C-----
Q 019931 172 PTGFAANMAV--IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIR----IAERTKMVEVFVYKH---C----- 237 (334)
Q Consensus 172 ~sG~~An~~a--i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~----ls~~~~g~~v~~~~~---~----- 237 (334)
++|++|+..+ +.+++.+ ||.|++..+.|.+....++ .. |.+++.++. +
T Consensus 126 ~ggt~al~l~~~~~~~~~~--------------gd~Vlv~~p~~~~~~~~~~~~~~~~----G~~v~~~~~~~~~~~~~~ 187 (448)
T 3meb_A 126 LSGTGSLHIGFEFLHLWMP--------------KAEFYMPSTTWPNHYGIYDKVFNKL----KVPYKEYTYLRKDGELEI 187 (448)
T ss_dssp SHHHHHHHHHHHHHHHHCT--------------TCCEEEESSCCTHHHHHHHHHHCTT----TSCCEEECCBCTTSCSSB
T ss_pred CcHHHHHHHHHHHHHHhCC--------------CCEEEECCCCCHhHHHHHHhhHHhC----CCeEEEEeccccccCCCc
Confidence 9999999774 4444443 7788888888888887777 55 777777765 2
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCC--cccccccCCCCC
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNG--GGVAEQFNCERD 312 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G--~g~~~~~~~~~~ 312 (334)
|+++|++.+++.+.++++|++.+++||+|.+.+ +++|+++|++||+++|+||+|....++... ......+.-...
T Consensus 188 d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 267 (448)
T 3meb_A 188 DFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGV 267 (448)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCC
Confidence 789999998864446789999999999998877 556999999999999999999864443200 011111101122
Q ss_pred ccEEEecCcccccCCc---cEE
Q 019931 313 VDICVGTLSKAAGCQG---GFI 331 (334)
Q Consensus 313 ~Div~~SlsKa~G~~G---G~i 331 (334)
..|++.||||+||+.| ||+
T Consensus 268 ~~i~~~S~SK~~g~~G~RiG~l 289 (448)
T 3meb_A 268 EVLVAQSFSKNFGLYGERIGCL 289 (448)
T ss_dssp CEEEEEECTTTSCCGGGCCEEE
T ss_pred cEEEEecccccCCCccccceee
Confidence 3488999999999877 886
No 169
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.78 E-value=9.2e-19 Score=168.89 Aligned_cols=202 Identities=13% Similarity=0.090 Sum_probs=133.3
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHh----cCCCCccccccCchHHHHHHHHHHHhH--hC---CCcEEEeccHHHHH
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARH----GMGPRGSALICGYTNYHRLLESCLADL--KK---KEDCLLCPTGFAAN 178 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~----g~g~~~sr~~~G~~~~~~~LE~~La~~--~g---~e~alv~~sG~~An 178 (334)
|+++|+|+++++ .+..+|.+++++.++ ..... ...++......+|+++++++ .| .+.+++++++++++
T Consensus 32 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al 108 (400)
T 3asa_A 32 QHTVINLSIGDT-TQPLNASVAEAFASSIARLSSPTT--CRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDL 108 (400)
T ss_dssp TSCCEECSSCCC-CCCCCHHHHHHHHHHHHHHTSSSC--CCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHH
T ss_pred CCceEeccCCCC-CCCCCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHH
Confidence 378999999975 667789999876543 21110 01111122347899999998 46 34577778888888
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE-EEEeeCCCHHHHHHHHhcCCCCcEEEE
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE-VFVYKHCDMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~-v~~~~~~D~~~Le~~l~~~~~~~~lVv 257 (334)
..++. ++.+ ||.|++..+.|......++.. |.+ ++.++.++-..+...+++. +++++|+
T Consensus 109 ~~~~~-~~~~--------------gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~l~~~-~~~~~v~ 168 (400)
T 3asa_A 109 FRLLS-FFGP--------------NQTVAIQDPSYPAYLDIARLT----GAKEIIALPCLQENAFFPEFPED-THIDILC 168 (400)
T ss_dssp HHHHH-HHCS--------------SCEEEEEESCCHHHHHHHHHT----TCSEEEEEECCGGGTTCCCCCTT-CCCSEEE
T ss_pred HHHHH-HcCC--------------CCEEEECCCCcHHHHHHHHHc----CCcceEecccchhcCcccChhhc-cCccEEE
Confidence 77553 4443 677888878888877776665 666 7777754211111001111 3678888
Q ss_pred EcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCC--CCccEEEecCcccccCCc---c
Q 019931 258 TDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE--RDVDICVGTLSKAAGCQG---G 329 (334)
Q Consensus 258 ~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~--~~~Div~~SlsKa~G~~G---G 329 (334)
+++++||+|.+.| +++|+++|+++|++||+||+|+...++ +........+. ++.+|+++||||+||..| |
T Consensus 169 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG 246 (400)
T 3asa_A 169 LCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISD--PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246 (400)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC--TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCE
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC--CCCCCchhhCCCCCCceEEEecchhhcCCcchhee
Confidence 8899999999988 667899999999999999999953332 22111112222 334688999999998766 8
Q ss_pred EEeeC
Q 019931 330 FIACR 334 (334)
Q Consensus 330 ~i~~~ 334 (334)
|++++
T Consensus 247 ~~~~~ 251 (400)
T 3asa_A 247 WTVIP 251 (400)
T ss_dssp EEECC
T ss_pred EEeeC
Confidence 88764
No 170
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.78 E-value=1.2e-18 Score=166.31 Aligned_cols=155 Identities=19% Similarity=0.237 Sum_probs=126.3
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
..+...++|+++++++|.+++++++||++|+..++.++ .+ +||.|++....|.++...++..
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~--------------~gd~Vi~~~~~~~~~~~~~~~~--- 95 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVG--------------PGDEVITPGFTYVATAETVALL--- 95 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCC--------------TTCEEEEESSSCTHHHHHHHHT---
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCC--------------CcCEEEECCCccHHHHHHHHHc---
Confidence 35778999999999999999999999999999999987 44 3788999999999988888776
Q ss_pred CCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCC
Q 019931 227 KMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNG 300 (334)
Q Consensus 227 ~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G 300 (334)
|++++.++.+ |+++|++++++ ++++|+ +.|++|.+.|+++|.++|++||++||+|++|+.|... .|
T Consensus 96 -G~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~-~~ 167 (367)
T 3nyt_A 96 -GAKPVYVDIDPRTYNLDPQLLEAAITP---RTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASY-KG 167 (367)
T ss_dssp -TCEEEEECBCTTTCSBCGGGTGGGCCT---TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEE-TT
T ss_pred -CCEEEEEecCCccCCcCHHHHHHhcCc---CCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeE-CC
Confidence 8888888753 88899888853 788888 5567899999999999999999999999999987542 22
Q ss_pred cccccccCCCCCccEEEecC--cccccC--CccEEee
Q 019931 301 GGVAEQFNCERDVDICVGTL--SKAAGC--QGGFIAC 333 (334)
Q Consensus 301 ~g~~~~~~~~~~~Div~~Sl--sKa~G~--~GG~i~~ 333 (334)
.. .+... |+++.|| +|.+|+ .||++++
T Consensus 168 ~~----~~~~~--di~~~Sf~~~K~l~~~g~gg~~~~ 198 (367)
T 3nyt_A 168 KR----SCNLS--TVACTSFFPSAPLGCYGDGGAIFT 198 (367)
T ss_dssp EE----TTSSS--SEEEEECCTTSSSCCSSCCEEEEE
T ss_pred ee----ccCCC--CEEEEECCCCCcCCCcCceeEEEe
Confidence 22 12112 7999997 899987 3688875
No 171
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.78 E-value=9.3e-19 Score=167.99 Aligned_cols=196 Identities=18% Similarity=0.244 Sum_probs=137.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-----CCCCccccccCchHHHHHHH----HHHHhHhCCCcEEE-eccHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-----MGPRGSALICGYTNYHRLLE----SCLADLKKKEDCLL-CPTGFAAN 178 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-----~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~alv-~~sG~~An 178 (334)
+.+++|++++++ +|.+++++.++- .|.++++...|. +...++| +++++++|.+...+ +++|++|+
T Consensus 24 ~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~ 98 (405)
T 2vi8_A 24 AKIELIASENFV----SRAVMEAQGSVLTNKYAEGYPGRRYYGGC-EYVDIVEELARERAKQLFGAEHANVQPHSGAQAN 98 (405)
T ss_dssp HSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred cceeeccCcccC----CHHHHHHHHHHhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHH
Confidence 568899998887 999999886542 122334444443 3345555 69999999887755 58999999
Q ss_pred HHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHH-HH--HHhhhcCCcEEEEeeC------CCHHHHHHHHhcC
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIID-GI--RIAERTKMVEVFVYKH------CDMSHLKTLLSCC 249 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~-g~--~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~ 249 (334)
..++.++.++ ||.|++..+.|.+... .. ..... +.+++.++. .|+++|++++++.
T Consensus 99 ~~a~~~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 162 (405)
T 2vi8_A 99 MAVYFTVLEH--------------GDTVLGMNLSHGGHLTHGSPVNFSGV--QYNFVAYGVDPETHVIDYDDVREKARLH 162 (405)
T ss_dssp HHHHHHHCCT--------------TCEEEEECGGGTCCTTTTCTTSHHHH--HSEEEEECBCTTTCSBCHHHHHHHHHHH
T ss_pred HHHHHHhcCC--------------CCEEEEecccccchhcccchhhhccc--eeEEEecccccccCCcCHHHHHHHHHhc
Confidence 9999988654 7888888888877643 11 12210 236666653 3899999998742
Q ss_pred CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCc
Q 019931 250 TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG 328 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G 328 (334)
++++|++.+. + .|...|+++|.++|++||++||+||+|+.|.++. +... .++ ...|+++.||||+|+ +.|
T Consensus 163 --~~~~v~~~~~-~-~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~---~~~~-~~~-~~~di~~~s~sK~~~g~~g 233 (405)
T 2vi8_A 163 --RPKLIVAAAA-A-YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA---GLHP-NPV-PYAHFVTTTTHKTLRGPRG 233 (405)
T ss_dssp --CCSEEEECCS-S-CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT---TSSC-CST-TTCSEEEEESSSTTCCCSC
T ss_pred --CCeEEEEeCC-C-CCccCCHHHHHHHHHHcCCEEEEEcccccccccc---CcCC-Ccc-ccCCEEEEeccccCCCCCC
Confidence 4567776432 2 3566789999999999999999999999775532 2111 222 246899999999997 788
Q ss_pred cEEeeC
Q 019931 329 GFIACR 334 (334)
Q Consensus 329 G~i~~~ 334 (334)
|+++++
T Consensus 234 G~~~~~ 239 (405)
T 2vi8_A 234 GMILCQ 239 (405)
T ss_dssp EEEEEC
T ss_pred eEEEEc
Confidence 998864
No 172
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.78 E-value=4.9e-18 Score=166.37 Aligned_cols=197 Identities=12% Similarity=0.037 Sum_probs=140.7
Q ss_pred cceeEEEeecCc-cCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH
Q 019931 107 QFKRLLLFSGND-YLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 107 ~g~~~l~f~sn~-yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al 185 (334)
.|+.|+||.++. ...+ ++.+++++.. +.. .++..+...+|+++|+++++.++++++++|++|+..+++++
T Consensus 40 ~~~~ylD~~~~~~~~~~--~~~~~~a~~~---~~~----~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l 110 (456)
T 2ez2_A 40 SKDIYIDLLTDSGTNAM--SDKQWAGMMM---GDE----AYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLA 110 (456)
T ss_dssp GGGCSEECSCSSSCCCC--CHHHHHHHTT---CCC----CSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHH
T ss_pred cccceeeeccccCCccC--CHHHHHHhhc---chh----hcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHh
Confidence 457789987764 2222 5777776652 211 12245777899999999999999999999999999999988
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC---------------CCHHHHHHHHhcCC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH---------------CDMSHLKTLLSCCT 250 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~---------------~D~~~Le~~l~~~~ 250 (334)
+++ || |+.+..+|.++...+... |++++.++. .|+++|++++++.+
T Consensus 111 ~~~--------------gd-i~~~~~~~~~~~~~~~~~----G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t 171 (456)
T 2ez2_A 111 IKP--------------GQ-YVAGNMYFTTTRYHQEKN----GAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG 171 (456)
T ss_dssp CCT--------------TC-EEEESSCCHHHHHHHHHT----TCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC
T ss_pred CCC--------------CC-EeccccccchhHHHHHHc----CCEEEEecccccccccccccccCCCCHHHHHHHHHhcc
Confidence 654 67 665555558877777766 788777642 28899999997522
Q ss_pred -CCcEEEEEcCCCC-CCCCccC---HHHHHHHHHHcCCEEEEecCcccc---c-----ccCCCccccc---ccCCCCCcc
Q 019931 251 -MRKKVVVTDSLFS-MDGDFAP---MVELVKLRRKYGFLLVLDDAHGTF---V-----CGKNGGGVAE---QFNCERDVD 314 (334)
Q Consensus 251 -~~~~lVv~e~v~n-~~G~~~p---L~~L~ela~k~ga~LivDeAh~~G---v-----~G~~G~g~~~---~~~~~~~~D 314 (334)
.+.++|++++++| ++|.+.| +++|+++|++||++||+||+|+.| + +...|..+.. ..+. ..|
T Consensus 172 ~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d 249 (456)
T 2ez2_A 172 AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFS--YAD 249 (456)
T ss_dssp GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHT--TCS
T ss_pred ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcc--cCC
Confidence 1248899998888 9998887 999999999999999999999975 1 1223332210 1121 236
Q ss_pred EEEecCcccccC-CccEEee
Q 019931 315 ICVGTLSKAAGC-QGGFIAC 333 (334)
Q Consensus 315 iv~~SlsKa~G~-~GG~i~~ 333 (334)
+++.|++|.++. .||++++
T Consensus 250 ~~~~S~kk~~~~~~gG~~~~ 269 (456)
T 2ez2_A 250 GCTMSGKKDCLVNIGGFLCM 269 (456)
T ss_dssp EEEEETTTTTCCSSCEEEEE
T ss_pred EEEEeCcccCCCCceeEEEE
Confidence 777788887653 4788876
No 173
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.78 E-value=4e-18 Score=165.34 Aligned_cols=177 Identities=15% Similarity=0.120 Sum_probs=136.3
Q ss_pred CHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCC
Q 019931 125 HPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKD 201 (334)
Q Consensus 125 ~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~ 201 (334)
+|++++++.+.- .+. ..+....|...+.+++++++++++|.++++++++|++|+..++.++ .++
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~------------- 81 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGE------------- 81 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCT-------------
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCC-------------
Confidence 688888765431 111 1133345666778999999999999988999999999999999987 543
Q ss_pred CCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHH
Q 019931 202 EKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELV 275 (334)
Q Consensus 202 ~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ 275 (334)
||.|++..+.|.++...++.. |++++.++.+ |+++|++++++ ++++|+++ |++|.+.|+++|.
T Consensus 82 -gd~Vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~~~---~~~G~~~~~~~i~ 150 (418)
T 2c81_A 82 -GDEVIVPSLTWIATATAVLNV----NALPVFVDVEADTYCIDPQLIKSAITD---KTKAIIPV---HLFGSMANMDEIN 150 (418)
T ss_dssp -TCEEEEESSSCTHHHHHHHHT----TCEEEEECBCTTTCSBCHHHHGGGCCT---TEEEECCB---CCTTCCCCHHHHH
T ss_pred -cCEEEECCCccHhHHHHHHHc----CCEEEEEecCCCCCCcCHHHHHHhhCC---CCeEEEEe---CCcCCcccHHHHH
Confidence 788998999999988888766 8888888754 77888877753 68888865 4789999999999
Q ss_pred HHHHHcCCEEEEecCccccc-ccCCCcccccccCCCCCccEEEecC--cccccC-CccEEee
Q 019931 276 KLRRKYGFLLVLDDAHGTFV-CGKNGGGVAEQFNCERDVDICVGTL--SKAAGC-QGGFIAC 333 (334)
Q Consensus 276 ela~k~ga~LivDeAh~~Gv-~G~~G~g~~~~~~~~~~~Div~~Sl--sKa~G~-~GG~i~~ 333 (334)
++|++||++||+|++|+.+. +. +.. .+... |+.+.|| +|.+|+ .||++++
T Consensus 151 ~~~~~~~~~li~D~a~~~~~~~~--~~~----~~~~~--~~~~~s~s~~K~~~~g~~g~~~~ 204 (418)
T 2c81_A 151 EIAQEHNLFVIEDCAQSHGSVWN--NQR----AGTIG--DIGAFSCQQGKVLTAGEGGIIVT 204 (418)
T ss_dssp HHHHHTTCEEEEECTTCTTCEET--TEE----TTSSS--SEEEEECCTTSSSCSSSCEEEEE
T ss_pred HHHHHCCCEEEEECcccccCccC--CEe----ccccc--ceEEEeccCCcccCCCCeEEEEE
Confidence 99999999999999999875 32 221 11112 5777888 999976 6688876
No 174
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.78 E-value=3.1e-18 Score=160.83 Aligned_cols=175 Identities=17% Similarity=0.040 Sum_probs=130.2
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKD 201 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~ 201 (334)
.+|.+++++.++-... ..........++++++++++|.+ .++++++|++|+..++.++.++
T Consensus 12 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~------------- 74 (352)
T 1iug_A 12 LHPKALEALARPQLHH----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAP------------- 74 (352)
T ss_dssp CCHHHHHHHHSCCCCT----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCT-------------
T ss_pred CCHHHHHHhccCCCCc----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCC-------------
Confidence 5799999988764321 12223456789999999999975 5677789999999999988654
Q ss_pred CCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHH
Q 019931 202 EKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVK 276 (334)
Q Consensus 202 ~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~e 276 (334)
||.|++....|.+.. ...+.. ..|.+++.++.+ |+++|++ +++++|++++++|++|.+.|+++|.+
T Consensus 75 -gd~vl~~~~~~~~~~-~~~~~~-~~g~~~~~v~~~~~~~~d~~~l~~------~~~~~v~~~~~~nptG~~~~l~~i~~ 145 (352)
T 1iug_A 75 -GERVLVPVYGKFSER-FYEIAL-EAGLVVERLDYPYGDTPRPEDVAK------EGYAGLLLVHSETSTGALADLPALAR 145 (352)
T ss_dssp -TCEEEEEECSHHHHH-HHHHHH-HTTCEEEEEECCTTCCCCTTTSCC------SSCSEEEEESEETTTTEECCHHHHHH
T ss_pred -CCeEEEEeCCchhHH-HHHHHH-HcCCceEEEeCCCCCCCCHHHHhc------cCCcEEEEEEecCCcceecCHHHHHH
Confidence 788888888888765 333321 127788877752 5666655 26789999999999999999999999
Q ss_pred HHHHc--CCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccc-cCCc-cEEee
Q 019931 277 LRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAA-GCQG-GFIAC 333 (334)
Q Consensus 277 la~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~-G~~G-G~i~~ 333 (334)
+|++| |+++|+|++|++|... +++. .++|++++|+||++ |+.| |++++
T Consensus 146 l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~ 198 (352)
T 1iug_A 146 AFKEKNPEGLVGADMVTSLLVGE---------VALEAMGVDAAASGSQKGLMCPPGLGFVAL 198 (352)
T ss_dssp HHHHHCTTCEEEEECTTTBTTBC---------CCSGGGTCSEEEEESSSTTCCCSCEEEEEE
T ss_pred HHHhhCCCCEEEEECCccccCcc---------eeccccCeeEEEecCcccccCCCceeEEEE
Confidence 99999 9999999999865321 1111 14689999999965 5456 77665
No 175
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.77 E-value=2.6e-18 Score=163.37 Aligned_cols=170 Identities=14% Similarity=0.064 Sum_probs=133.3
Q ss_pred HHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEE
Q 019931 128 IAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAI 206 (334)
Q Consensus 128 v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~V 206 (334)
+++++.+.-... .++..+...+|+++++++++.++++++++|++|+..++.++ .++ +|.|
T Consensus 21 ~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~--------------gd~v 81 (374)
T 3uwc_A 21 YLNDLREFIKTA-----DFTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGA--------------GDEV 81 (374)
T ss_dssp HHHHHHHHHHHT-----CCSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCT--------------TCEE
T ss_pred HHHHHHHHHHcC-----CcccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCC--------------CCEE
Confidence 677665432111 12345778999999999999999999999999999999887 543 7889
Q ss_pred EEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHc
Q 019931 207 FSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKY 281 (334)
Q Consensus 207 l~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ 281 (334)
++..+.|.+....++.. |.+++.++.+ |+++|++++++ ++++|+ ++|++|.+.|+++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~---~~n~~G~~~~~~~i~~~~~~~ 151 (374)
T 3uwc_A 82 ITCANTFIASVGAIVQA----GATPVLVDSENGYVIDPEKIEAAITD---KTKAIM---PVHYTGNIADMPALAKIAKKH 151 (374)
T ss_dssp EEESSSCHHHHHHHHHT----TCEEEEECBCTTSSBCGGGTGGGCCT---TEEEEC---CBCGGGCCCCHHHHHHHHHHT
T ss_pred EECCCccHHHHHHHHHc----CCEEEEEecCCCCCcCHHHHHHhCCC---CceEEE---EeCCcCCcCCHHHHHHHHHHc
Confidence 99999999988887766 8899988875 88888888764 677777 778999999999999999999
Q ss_pred CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--ccccC--CccEEee
Q 019931 282 GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAGC--QGGFIAC 333 (334)
Q Consensus 282 ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G~--~GG~i~~ 333 (334)
|++||+|++|+.|..- .+. ..+. ..|+++.||| |.+|+ .||++++
T Consensus 152 ~~~li~D~~~~~g~~~-~~~----~~~~--~~d~~~~s~~~~K~l~~~g~~g~~~~ 200 (374)
T 3uwc_A 152 NLHIVEDACQTILGRI-NDK----FVGS--WGQFACFSLHPLKNLNVWSDAGVIIT 200 (374)
T ss_dssp TCEEEEECTTCTTCEE-TTE----ETTS--SSSEEEEECSSSSSSCCSSCCEEEEE
T ss_pred CCEEEEeCCCccCcee-CCe----eccc--cccEEEEeCCCCCcCCccceeEEEEe
Confidence 9999999999976431 111 1221 2489999977 99976 4688775
No 176
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.77 E-value=5.1e-19 Score=178.34 Aligned_cols=202 Identities=13% Similarity=0.104 Sum_probs=139.3
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC-------CcEEEeccHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK-------EDCLLCPTGFAANMAV 181 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~-------e~alv~~sG~~An~~a 181 (334)
+.++||+.+++ ++. +|.+++++.+.-.+...+....|...+.+++++.+.+..+. ++++++++|++|+..+
T Consensus 103 ~~~i~l~~g~~-~~~-~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~ 180 (533)
T 3f6t_A 103 IDAVNYCHTEL-GLN-RDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYA 180 (533)
T ss_dssp HHHHHHHHHTT-CCC-HHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHH
T ss_pred HhheeccCCCC-CcC-CcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHH
Confidence 35678888764 444 67777644332111111112345556666666666555232 4677888889999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC---------CHHHHHHHHhcCCCC
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC---------DMSHLKTLLSCCTMR 252 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~---------D~~~Le~~l~~~~~~ 252 (334)
+.++.... ..++||.|+++.+.|.++...++.. +++++.++.+ |+++|++++++ +
T Consensus 181 ~~~l~~~~---------l~~~gd~Viv~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~---~ 244 (533)
T 3f6t_A 181 FHSLAENH---------LLKKGDKIAINEPIFTPYLRIPELK----DYELVEVDLHSYEKNDWEIEPNEIEKLKDP---S 244 (533)
T ss_dssp HHHHHHTT---------SSCTTCEEEEESSCCHHHHTSGGGG----GSEEEEECCCEETTTTSEECHHHHHHHSCT---T
T ss_pred HHHhhhhh---------ccCCcCEEEEcCCCcHHHHHHHHHc----CCeEEEEEecCCcccCCCCCHHHHHHHhCC---C
Confidence 98742110 0024789999999999988777766 6777777642 78999988753 7
Q ss_pred cEEEEEcCCCCCCCCccCHH---HHHHHHH-HcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 253 KKVVVTDSLFSMDGDFAPMV---ELVKLRR-KYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~---~L~ela~-k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
+++|++++++||+|.+.|.+ +|+++|+ +||+++|+||+|+...++ +..+. ...++.+|+++||||+||+.|
T Consensus 245 ~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~--~~~~~---~~~~~~~i~~~S~SK~~g~~G 319 (533)
T 3f6t_A 245 IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN--FKSIY---SVVPYNTMLVYSYSKLFGCTG 319 (533)
T ss_dssp EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT--CCCHH---HHSGGGEEEEEESHHHHTCGG
T ss_pred CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC--ccCHh---hcCCCCEEEEecCcccCCCcc
Confidence 89998889999999998865 7888888 689999999999854332 22221 122345799999999999877
Q ss_pred ---cEEee
Q 019931 329 ---GFIAC 333 (334)
Q Consensus 329 ---G~i~~ 333 (334)
||+++
T Consensus 320 ~RiG~l~~ 327 (533)
T 3f6t_A 320 WRLGVIAL 327 (533)
T ss_dssp GCEEEEEE
T ss_pred cceEEEEE
Confidence 99876
No 177
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.77 E-value=3.1e-18 Score=164.73 Aligned_cols=184 Identities=16% Similarity=0.164 Sum_probs=133.8
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC---CcEEEeccHHHHHHHHHHHHh
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK---EDCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~---e~alv~~sG~~An~~ai~al~ 186 (334)
+++|++.... ....+|++++++..| .+....++++++.+++++|. ++++++++|++|+..++.++
T Consensus 29 ~v~~~~~~~~-~~~~~~~v~~a~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~- 96 (374)
T 2aeu_A 29 ALYDLSGLSG-GFLIDEKDKALLNTY----------IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL- 96 (374)
T ss_dssp GCEECSSCCC-CCCCCHHHHHHHTST----------THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH-
T ss_pred ceeeecccCC-CCCCCHHHHHHHHHh----------cCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC-
Confidence 6677665431 234678888887622 12234557888888889998 77899999999999999976
Q ss_pred hhhhhccCCCccCCCCCeEEEEcCCC---chhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEE-EEEcCCC
Q 019931 187 NIASLLAGDEKSFKDEKIAIFSDALN---HASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKV-VVTDSLF 262 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~gd~Vl~d~~~---H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~l-Vv~e~v~ 262 (334)
+ ||.|++..+. |.+....++.. |++++.+ .|+++|+++ + +++++ |++++++
T Consensus 97 -~--------------gd~Vl~~~~~y~~~~~~~~~~~~~----g~~~~~v--~d~~~l~~~-~---~~~~~~v~~~~p~ 151 (374)
T 2aeu_A 97 -K--------------PKKVIHYLPELPGHPSIERSCKIV----NAKYFES--DKVGEILNK-I---DKDTLVIITGSTM 151 (374)
T ss_dssp -C--------------CSEEEEECSSSSCCTHHHHHHHHT----TCEEEEE--SCHHHHHTT-C---CTTEEEEEECBCT
T ss_pred -C--------------CCEEEEecCCCCccHHHHHHHHHc----CcEEEEe--CCHHHHHhc-C---CCccEEEEEccCC
Confidence 5 6667766663 33444444444 7888877 799998887 3 37899 9999999
Q ss_pred CCCC-CccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCccEEeeC
Q 019931 263 SMDG-DFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQGGFIACR 334 (334)
Q Consensus 263 n~~G-~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~GG~i~~~ 334 (334)
|++| ...|+++|.++|++||++||+||+|+.+..++...... .. .++|++++|+||+++ ..+||++++
T Consensus 152 nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~--~~~di~~~S~sK~l~g~~~G~~~~~ 221 (374)
T 2aeu_A 152 DLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPA--LK--LGADLVVTSTDKLMEGPRGGLLAGK 221 (374)
T ss_dssp TSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCH--HH--HTCSEEEEETTSSSSSCSCEEEEEE
T ss_pred CCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCc--cc--cCCcEEEecCcccccCcceEEEEEC
Confidence 9999 89999999999999999999999998763211111000 11 135899999999995 467888763
No 178
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.77 E-value=1.6e-18 Score=167.32 Aligned_cols=186 Identities=14% Similarity=0.084 Sum_probs=141.6
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GN 187 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~ 187 (334)
++|+||+++.. .+ +|.+++++.+..... .++..+...++++++++++|.+.++++++|++|+..++.++ ++
T Consensus 30 ~~~id~~~~~~-~~--~~~v~~a~~~~~~~~-----~y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~ 101 (399)
T 2oga_A 30 VPFLDLKAAYE-EL--RAETDAAIARVLDSG-----RYLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIG 101 (399)
T ss_dssp BCSCCHHHHHH-HT--HHHHHHHHHHHHHHT-----CCSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCC
T ss_pred CcccccCcCCC-CC--CHHHHHHHHHHHhcC-----CCCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCC
Confidence 57889887642 12 288988876543210 12234677999999999999988999999999999999887 54
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+ +|.|++..+.|.++...++.. |.+++.++. .|+++|++++++ ++++|++
T Consensus 102 ~--------------gd~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~~--- 157 (399)
T 2oga_A 102 P--------------GDEVIVPSHTYIASWLAVSAT----GATPVPVEPHEDHPTLDPLLVEKAITP---RTRALLP--- 157 (399)
T ss_dssp T--------------TCEEEEESSSCTHHHHHHHHT----TCEEEEECBCSSSSSBCHHHHHHHCCT---TEEEECC---
T ss_pred C--------------cCEEEECCCccHHHHHHHHHC----CCEEEEEecCCCCCCcCHHHHHHhcCC---CCeEEEE---
Confidence 3 778888888888888777766 788887763 378999988864 6788774
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC--cccccC--CccEEee
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL--SKAAGC--QGGFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl--sKa~G~--~GG~i~~ 333 (334)
.|++|.+.|+++|.++|+++|++||+|++|+.|... ++.. ++. -.|+++.|| +|.+|+ .||++++
T Consensus 158 ~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~----~~~--~~di~~~S~~~sK~~~~~G~~g~~~~ 226 (399)
T 2oga_A 158 VHLYGHPADMDALRELADRHGLHIVEDAAQAHGARY-RGRR----IGA--GSSVAAFSFYPGKNLGCFGDGGAVVT 226 (399)
T ss_dssp BCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEE----TTC--TTCEEEEECCTTSSSCCSSCCEEEEE
T ss_pred eCCcCCccCHHHHHHHHHHcCCEEEEECcccccCcc-CCee----ccc--ccCEEEEeCCCCccCCcCCceEEEEe
Confidence 467899999999999999999999999999977432 2322 121 137999999 799987 5688775
No 179
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.77 E-value=1e-18 Score=171.57 Aligned_cols=208 Identities=12% Similarity=0.052 Sum_probs=136.3
Q ss_pred cceeEEEeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH
Q 019931 107 QFKRLLLFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV 185 (334)
Q Consensus 107 ~g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al 185 (334)
.|+.||||.++.+. |.|++++.+.- .|. ..++..+...+|+++++++++.+++++++||++||..+++++
T Consensus 39 ~~~~ylD~~~~~~~-----~~v~~a~~~~l~~~~----~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~ 109 (467)
T 2oqx_A 39 SEDVFIDLLTDSGT-----GAVTQSMQAAMMRGD----EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVL 109 (467)
T ss_dssp GGGCSEECSCCSSC-----SCCCHHHHHHTTSCC----CCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHH
T ss_pred CCCeeEecccCCCc-----HHHHHHHHHHhccCc----ceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHH
Confidence 35789999776543 78888776552 322 134455677899999999999999999999999999999988
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHH-HHhhhcCCcEEEEe--------------eC-CCHHHHHHHHhcC
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGI-RIAERTKMVEVFVY--------------KH-CDMSHLKTLLSCC 249 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~-~ls~~~~g~~v~~~--------------~~-~D~~~Le~~l~~~ 249 (334)
..+... ..+ ..++|.|+.. .+|....... ... ++.++.. .. .|+++||+++++.
T Consensus 110 ~~~~~~-~~G----~~~~d~Ii~~-~~h~~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~ 179 (467)
T 2oqx_A 110 IKKREQ-EKG----LDRSKMVAFS-NYFFDTTQGHSQIN----GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV 179 (467)
T ss_dssp HHHHHH-HHC----CCTTTCEEEE-SSCCHHHHHHHHHT----TCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred hccccc-cCC----CCccceEEec-ccccccchhhhhcc----CcceeeccccccccCCCCCCccCCcCHHHHHHHHHhc
Confidence 754000 000 0010446655 4675433222 222 3443321 11 2899999999742
Q ss_pred C-CCcEEEEEcCCCCCC-CCccC---HHHHHHHHHHcCCEEEEecCccc-ccc-------cCCCcccccccC--CCCCcc
Q 019931 250 T-MRKKVVVTDSLFSMD-GDFAP---MVELVKLRRKYGFLLVLDDAHGT-FVC-------GKNGGGVAEQFN--CERDVD 314 (334)
Q Consensus 250 ~-~~~~lVv~e~v~n~~-G~~~p---L~~L~ela~k~ga~LivDeAh~~-Gv~-------G~~G~g~~~~~~--~~~~~D 314 (334)
. +++++|++++++|++ |.+.+ +++|+++|++||++||+|++|.. +.+ +..|..... ++ ....+|
T Consensus 180 ~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~-~~~~~~~~~d 258 (467)
T 2oqx_A 180 GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQ-ITRETYKYAD 258 (467)
T ss_dssp CGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHH-HHHHHGGGCS
T ss_pred CCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHH-HhhhhhccCC
Confidence 1 268899999999996 77655 78999999999999999999987 543 222322111 11 001256
Q ss_pred EEEecCcccccCC-ccEEeeC
Q 019931 315 ICVGTLSKAAGCQ-GGFIACR 334 (334)
Q Consensus 315 iv~~SlsKa~G~~-GG~i~~~ 334 (334)
+++.|+||++|+. ||+++++
T Consensus 259 ~~~~s~sK~~g~~~Gg~~~~~ 279 (467)
T 2oqx_A 259 MLAMSAKKDAMVPMGGLLCMK 279 (467)
T ss_dssp EEEEESSSTTCCSSCEEEEEC
T ss_pred eEEEecccccCCCCceEEEec
Confidence 7889999999875 8888763
No 180
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.77 E-value=7.6e-18 Score=159.77 Aligned_cols=173 Identities=14% Similarity=0.087 Sum_probs=133.3
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH---hhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV---GNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al---~~~~~~~~~~~~~~~ 200 (334)
-+|++++++.++-..... +..+...+++++|++++|.+++++++||++|+..++.++ .+
T Consensus 11 ~~~~v~~a~~~~~~~~~~-----~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~------------- 72 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSKQL-----TQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSA------------- 72 (375)
T ss_dssp CCHHHHHHHHHHHTSSCC-----SSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCT-------------
T ss_pred CCHHHHHHHHHHHHcCcc-----cCChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCC-------------
Confidence 589999988765432111 124667899999999999998999999999999999987 44
Q ss_pred CCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHH
Q 019931 201 DEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELV 275 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ 275 (334)
+||.|++..+.|.++...+... |++++.++.+ |+++|++++++ ++++|++.++ +|.+.|+++|.
T Consensus 73 -~gd~Vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~---tG~~~~l~~i~ 141 (375)
T 2fnu_A 73 -DRNEIITTPISFVATANMLLES----GYTPVFAGIKNDGNIDELALEKLINE---RTKAIVSVDY---AGKSVEVESVQ 141 (375)
T ss_dssp -TSCEEEECSSSCTHHHHHHHHT----TCEEEECCBCTTSSBCGGGSGGGCCT---TEEEEEEECG---GGCCCCHHHHH
T ss_pred -CCCEEEECCCccHhHHHHHHHC----CCEEEEeccCCCCCCCHHHHHhhcCc---CceEEEEeCC---cCCccCHHHHH
Confidence 3788999999999988887766 8888888753 78888887753 6787776655 79999999999
Q ss_pred HHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--ccccC-CccEEe
Q 019931 276 KLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAGC-QGGFIA 332 (334)
Q Consensus 276 ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G~-~GG~i~ 332 (334)
++|++||++||+|++|+.|... .+. ..+..+ |+++.||| |.+|+ .|++++
T Consensus 142 ~l~~~~~~~li~D~a~~~~~~~-~~~----~~~~~~--~i~~~s~s~~K~~~~g~g~~~~ 194 (375)
T 2fnu_A 142 KLCKKHSLSFLSDSSHALGSEY-QNK----KVGGFA--LASVFSFHAIKPITTAEGGAVV 194 (375)
T ss_dssp HHHHHHTCEEEEECTTCTTCEE-TTE----ETTSSS--SEEEEECCTTSSSCCSSCEEEE
T ss_pred HHHHHcCCEEEEECccccCCeE-CCe----eccccC--CeEEEeCCCCCCccccCceEEE
Confidence 9999999999999999987542 111 122112 67888888 99986 445554
No 181
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.77 E-value=6.6e-18 Score=165.19 Aligned_cols=195 Identities=14% Similarity=0.093 Sum_probs=140.7
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhh
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGN 187 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~ 187 (334)
|+++|+|+.+++ +|++++++.+.-... .+...+...++++++++++|.++++++++|++|+..++.++..
T Consensus 30 ~~~~i~~~~~~~-----~~~~~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~ 99 (437)
T 3bb8_A 30 GKSVVPPSGKVI-----GTKELQLMVEASLDG-----WLTTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTS 99 (437)
T ss_dssp TTSCBCSCCCCC-----CHHHHHHHHHHHHHC-----CCBSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTC
T ss_pred CCccccCCCCCC-----CHHHHHHHHHHHHcC-----CcCCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhh
Confidence 477888887775 578888765432110 1223467799999999999999999999999999999988720
Q ss_pred hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCC
Q 019931 188 IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 188 ~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
.. +. ....++||.|++....|.++...++.. |++++.++.+ |+++|++++++ ++++|++.+
T Consensus 100 ~~--~~---~~~~~~gd~Vi~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~- 166 (437)
T 3bb8_A 100 PK--LG---VRALKPGDEVITVAAGFPTTVNPTIQN----GLIPVFVDVDIPTYNVNASLIEAAVSD---KTKAIMIAH- 166 (437)
T ss_dssp GG--GG---GGSCCTTCEEEECSSSCHHHHHHHHHT----TCEEEECCEETTTTEECGGGHHHHCCT---TEEEEEEEC-
T ss_pred cc--cc---cccCCCcCEEEECCCCcHHHHHHHHHc----CCEEEEEeccCccCCcCHHHHHHhcCC---CCeEEEEeC-
Confidence 00 00 000124788999999999998888766 8888887653 78999998864 678777653
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc---CCccEEeeC
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG---CQGGFIACR 334 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G---~~GG~i~~~ 334 (334)
+.|.+.|+++|.++|+++|++||+|++|+.|... .+. ..+. ..|+++.||+|+.+ +.||+++++
T Consensus 167 --~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~--~~d~~~~s~~~~k~l~~g~gg~~~~~ 233 (437)
T 3bb8_A 167 --TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGK----MAGT--FGDIGTVSFYPAKHITMGEGGAVFTQ 233 (437)
T ss_dssp --GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTE----ETTS--SSSEEEEECSTTSSSCCSSCEEEEES
T ss_pred --CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCe----eccc--ccCEEEEECcCCcCCCCCCeEEEEeC
Confidence 3577899999999999999999999999987543 222 1221 24788888865553 356888764
No 182
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.76 E-value=9.8e-18 Score=163.05 Aligned_cols=183 Identities=16% Similarity=0.092 Sum_probs=138.0
Q ss_pred EeecCccCCCCCCHHHHHHHHHhc-CCCCccccccCc-hHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhh
Q 019931 113 LFSGNDYLGLSSHPTIAKAAARHG-MGPRGSALICGY-TNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIAS 190 (334)
Q Consensus 113 ~f~sn~yLgl~~~p~v~~a~~~~g-~g~~~sr~~~G~-~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~ 190 (334)
+|..++ ..+..+|.+++++.+.- .+ .++. .+...+|+++++++++.++++++++|++|+..++.++. +
T Consensus 20 ~l~~~~-p~~~~p~~~~~a~~~~~~~~------~y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-~-- 89 (424)
T 2po3_A 20 PLLVGR-PNRIDRARLYERLDRALDSQ------WLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-L-- 89 (424)
T ss_dssp CEETTC-CCCCCHHHHHHHHHHHHHHT------CCSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-C--
T ss_pred cccccC-CCCCChHHHHHHHHHHHhcC------CcccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-C--
Confidence 455554 34555778888775532 12 1233 46779999999999999999999999999999999874 3
Q ss_pred hccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCC
Q 019931 191 LLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSM 264 (334)
Q Consensus 191 ~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~ 264 (334)
+|.|++..+.|.++...+... |.+++.++.+ |+++|++++++ ++++|++.+ +
T Consensus 90 ------------gd~Vlv~~~~~~~~~~~~~~~----G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~---~ 147 (424)
T 2po3_A 90 ------------TGEVIMPSMTFAATPHALRWI----GLTPVFADIDPDTGNLDPDQVAAAVTP---RTSAVVGVH---L 147 (424)
T ss_dssp ------------CSEEEEESSSCTHHHHHHHHT----TCEEEEECBCTTTSSBCHHHHGGGCCT---TEEEEEEEC---G
T ss_pred ------------CCEEEECCCccHHHHHHHHHc----CCEEEEEecCCCcCCcCHHHHHHhhCc---CCcEEEEEC---C
Confidence 678888888898888877766 8888888754 77888777753 678887643 6
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--ccccC-CccEEeeC
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAGC-QGGFIACR 334 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G~-~GG~i~~~ 334 (334)
+|.+.++++|.++|+++|++||+|++|+.|.. ..+..+ +. ..||++.||| |++++ .||+++++
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~-~~~~~~----~~--~~di~~~S~sk~K~l~~~~~G~~v~~ 213 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCA-VDGRPA----GS--LGDAEVFSFHATKAVNAFEGGAVVTD 213 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEET----TS--SSSEEEEECCTTSSSCCSSCEEEEES
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCe-ECCeec----cc--ccCEEEEeCCCCCCccCCCCeEEEeC
Confidence 89999999999999999999999999997643 223221 11 1369999998 88864 56888764
No 183
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.76 E-value=6.5e-18 Score=161.66 Aligned_cols=182 Identities=14% Similarity=0.155 Sum_probs=139.9
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhh
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNI 188 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~ 188 (334)
++|+|+..+ + +|++++++.+.-... . .+..+...+++++++++++.+++++++||++|+..++.++ .++
T Consensus 9 ~~i~~~~p~---~--~~~~~~a~~~~~~~~---~--~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~ 78 (393)
T 1mdo_A 9 DFLPFSRPA---M--GAEELAAVKTVLDSG---W--ITTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGE 78 (393)
T ss_dssp CCBCSCCCC---C--CHHHHHHHHHHHHHT---C--CSSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCT
T ss_pred cccccCCCC---C--CHHHHHHHHHHHhcC---C--cCCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCC
Confidence 466777632 3 478888775532110 1 1234777999999999999999999999999999999987 543
Q ss_pred hhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 189 ASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 189 ~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
||.|++..+.|.++...++.. |.+++.++. .|+++|++++++ ++++|++++
T Consensus 79 --------------gd~Vl~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~-- 135 (393)
T 1mdo_A 79 --------------GDEVITPSMTWVSTLNMIVLL----GANPVMVDVDRDTLMVTPEHIEAAITP---QTKAIIPVH-- 135 (393)
T ss_dssp --------------TCEEEEESSSCHHHHHHHHHT----TCEEEEECBCTTTCCBCHHHHHHHCCT---TEEEECCBC--
T ss_pred --------------CCEEEeCCCccHhHHHHHHHC----CCEEEEEeccCCcCCCCHHHHHHhcCC---CceEEEEeC--
Confidence 788888889999888877766 888888763 378999988864 678888653
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--cccc-CCccEEee
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAG-CQGGFIAC 333 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G-~~GG~i~~ 333 (334)
++|.+.|+++|.++|+++|+++|+|++|+.|... .+.. ++. .|+++.||+ |.++ ..||++++
T Consensus 136 -~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~----~~~---~d~~~~S~~k~K~l~~~~~g~~~~ 200 (393)
T 1mdo_A 136 -YAGAPADLDAIYALGERYGIPVIEDAAHATGTSY-KGRH----IGA---RGTAIFSFHAIKNITCAEGGIVVT 200 (393)
T ss_dssp -GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEE-TTEE----TTS---SSEEEEECCTTSSSCSSSCEEEEE
T ss_pred -CCCCcCCHHHHHHHHHHcCCeEEEECccccCCeE-CCee----cCC---CCeEEEeCCCCCccccccceEEEe
Confidence 6899999999999999999999999999976432 2221 222 689999999 8885 46788876
No 184
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.76 E-value=5.7e-18 Score=161.20 Aligned_cols=177 Identities=11% Similarity=0.082 Sum_probs=130.7
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
.+|.+++++.+.-.+. ......+...+++++++++++.+ .++++++|++|+..+++++.++
T Consensus 34 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~------------ 97 (393)
T 3kgw_A 34 LAPRVLAAGSLRMIGH----MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEP------------ 97 (393)
T ss_dssp CCHHHHHHTTCCCCCT----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCT------------
T ss_pred CCHHHHHHhcccccCc----ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCC------------
Confidence 4788988886632221 11222466789999999999864 3567799999999999988664
Q ss_pred CCCeEEEEcCCCchh--hHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHAS--IIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s--~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++....|.+ ....+... |.+++.++. .|+++|++++++. ++++|++++++|++|.+.|+++
T Consensus 98 --gd~vl~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~l~~ 169 (393)
T 3kgw_A 98 --GDSFLTGTNGIWGMRAAEIADRI----GARVHQMIKKPGEHYTLQEVEEGLAQH--KPVLLFLVHGESSTGVVQPLDG 169 (393)
T ss_dssp --TCEEEEEESSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECCCTT
T ss_pred --CCEEEEEeCCchhHHHHHHHHHc----CCceEEEeCCCCCCCCHHHHHHHHhhC--CCcEEEEeccCCcchhhccHHH
Confidence 6777766555542 23333333 788887763 4899999999752 5789999999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCccccc-CCc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAAG-CQG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~G-~~G-G~i~~ 333 (334)
|.++|++||++||+|++|+.|... +++ ..++|+++.|+||+++ ..| |++++
T Consensus 170 i~~l~~~~~~~li~De~~~~g~~~---------~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~ 223 (393)
T 3kgw_A 170 FGELCHRYQCLLLVDSVASLGGVP---------IYMDQQGIDIMYSSSQKVLNAPPGISLISF 223 (393)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTSC---------CCTTTTTCCEEEEESSSTTCCCSSCEEEEE
T ss_pred HHHHHHHcCCEEEEECCccccCcc---------cchhhcCCCEEEecCcccccCCCceeEEEE
Confidence 999999999999999999865221 111 1346899999999884 444 67665
No 185
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.76 E-value=3.1e-17 Score=159.74 Aligned_cols=170 Identities=17% Similarity=0.138 Sum_probs=127.4
Q ss_pred ccCchHHHHHHHHHHHhHhCCC-----------cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCc
Q 019931 145 ICGYTNYHRLLESCLADLKKKE-----------DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNH 213 (334)
Q Consensus 145 ~~G~~~~~~~LE~~La~~~g~e-----------~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H 213 (334)
..|+.++.+++.+.++++.|.+ .+++++++++|+..++.+++++ ||.|++..+.|
T Consensus 77 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~--------------gd~Vlv~~p~y 142 (425)
T 2r2n_A 77 SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINP--------------GDNVLLDEPAY 142 (425)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCT--------------TCEEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCC--------------CCEEEEeCCCc
Confidence 4667778888888888877742 4666788899999999988764 78888888888
Q ss_pred hhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCC---------CCcEEEEE-cCCCCCCCCccCHH---HHHH
Q 019931 214 ASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCT---------MRKKVVVT-DSLFSMDGDFAPMV---ELVK 276 (334)
Q Consensus 214 ~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~---------~~~~lVv~-e~v~n~~G~~~pL~---~L~e 276 (334)
......++.. |++++.++. .|+++|++++++.+ .++++|++ .+++||+|.+.|.+ +|++
T Consensus 143 ~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 218 (425)
T 2r2n_A 143 SGTLQSLHPL----GCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYE 218 (425)
T ss_dssp HHHHHHHGGG----TCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHc----CCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHH
Confidence 8887777665 788888775 38899999997321 35677755 78999999998855 8999
Q ss_pred HHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 277 LRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 277 la~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
+|++||++||+||+|+...++.........++. .+.+|+++||||+|| .| ||++++
T Consensus 219 ~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~i~~~s~SK~~~-~GlRiG~~~~~ 277 (425)
T 2r2n_A 219 LARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDV-DGRVIRADSFSKIIS-SGLRIGFLTGP 277 (425)
T ss_dssp HHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCT-TSCEEEEEESTTTTC-STTCCEEEEEE
T ss_pred HHHHcCCEEEEECCcccccCCCCCCCCccccCC-CCCEEEEccchhhcc-CccceEEEecC
Confidence 999999999999999975553211111111221 234689999999998 66 888763
No 186
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.76 E-value=3.8e-18 Score=163.80 Aligned_cols=196 Identities=19% Similarity=0.177 Sum_probs=134.3
Q ss_pred eeEEEeecC-ccCCCCCCHHHHHHHHHhc-----CCCCccccccCchHHHHHHH----HHHHhHhCCCcE-EEeccHHHH
Q 019931 109 KRLLLFSGN-DYLGLSSHPTIAKAAARHG-----MGPRGSALICGYTNYHRLLE----SCLADLKKKEDC-LLCPTGFAA 177 (334)
Q Consensus 109 ~~~l~f~sn-~yLgl~~~p~v~~a~~~~g-----~g~~~sr~~~G~~~~~~~LE----~~La~~~g~e~a-lv~~sG~~A 177 (334)
++++||.++ +++ +|.|++++.++- .+.+.++...|.. .+..+| +++++++|.+.. +++++|++|
T Consensus 23 ~~~i~~~~~~~~~----~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~-~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a 97 (407)
T 2dkj_A 23 REGLELIASENFV----SKQVREAVGSVLTNKYAEGYPGARYYGGCE-VIDRVESLAIERAKALFGAAWANVQPHSGSQA 97 (407)
T ss_dssp HTSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCCH-HHHHHHHHHHHHHHHHHTCSEEECCCSSHHHH
T ss_pred hcceeeccCCCCC----CHHHHHHHHhhhhcCcccCCCcccccCCch-HHHHHHHHHHHHHHHHhCCCcceEEecchHHH
Confidence 567887665 555 899999886542 1222233333543 344555 499999998876 556899999
Q ss_pred HHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhH---HHHHHhhhcCCcEEEEee------CCCHHHHHHHHhc
Q 019931 178 NMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASII---DGIRIAERTKMVEVFVYK------HCDMSHLKTLLSC 248 (334)
Q Consensus 178 n~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~---~g~~ls~~~~g~~v~~~~------~~D~~~Le~~l~~ 248 (334)
+..++.++..+ ||.|++..+.|.++. ..+..... ....+.++ ..|+++|++++++
T Consensus 98 ~~~~~~~~~~~--------------gd~Vl~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~ 161 (407)
T 2dkj_A 98 NMAVYMALMEP--------------GDTLMGMDLAAGGHLTHGSRVNFSGK--LYKVVSYGVRPDTELIDLEEVRRLALE 161 (407)
T ss_dssp HHHHHHHHCCT--------------TCEEEEECGGGTCCGGGTCTTSHHHH--HSEEEEECCCTTTSSCCHHHHHHHHHH
T ss_pred HHHHHHHhcCC--------------CCEEEEecccccCccchHHHHHhcCc--eEEEEecCCCcccCccCHHHHHHHHhh
Confidence 99999988654 778888888887663 22222210 12444553 2489999999974
Q ss_pred CCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CC
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQ 327 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~ 327 (334)
. ++++|++..++|+ .+.|+++|.++|++||++||+||+|+.|.... |... ......|+++.||||+++ ..
T Consensus 162 ~--~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~----~~~~~~di~~~s~sK~l~g~~ 232 (407)
T 2dkj_A 162 H--RPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAA-GLHP----NPLPYAHVVTSTTHKTLRGPR 232 (407)
T ss_dssp H--CCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TCSC----CCTTTCSEEEEESSGGGCCCS
T ss_pred c--CCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEcccccccccc-CccC----CccccccEEEEeccccCCCCC
Confidence 2 5677777555554 67899999999999999999999999865432 2111 111236899999999994 67
Q ss_pred ccEEeeC
Q 019931 328 GGFIACR 334 (334)
Q Consensus 328 GG~i~~~ 334 (334)
||+++++
T Consensus 233 ~G~~~~~ 239 (407)
T 2dkj_A 233 GGLILSN 239 (407)
T ss_dssp CEEEEES
T ss_pred ceEEEEC
Confidence 8998864
No 187
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.76 E-value=1e-17 Score=160.75 Aligned_cols=174 Identities=15% Similarity=0.172 Sum_probs=132.9
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCC
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEK 203 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~g 203 (334)
+|++++++.+.-... .+.+..+...+|+++++++++.++++++++|++|+..++.++ .++ |
T Consensus 35 ~~~~~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~--------------g 96 (391)
T 3dr4_A 35 DGNERDYVLECMDTT----WISSVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGP--------------G 96 (391)
T ss_dssp CSSHHHHHHHHHHHT----CCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCT--------------T
T ss_pred CHHHHHHHHHHHHcC----CccCCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCC--------------c
Confidence 467777665432110 112345778999999999999999999999999999999987 543 7
Q ss_pred eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHH
Q 019931 204 IAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKL 277 (334)
Q Consensus 204 d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~el 277 (334)
|.|++..+.|.+....++.. |++++.++.+ |+++|++++++ ++++|++ .|++|.+.|+++|.++
T Consensus 97 d~vl~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~---~n~tG~~~~~~~i~~l 166 (391)
T 3dr4_A 97 DEVIVPSLTYIASANSVTYC----GATPVLVDNDPRTFNLDAAKLEALITP---RTKAIMP---VHLYGQICDMDPILEV 166 (391)
T ss_dssp CEEEEESSSCTHHHHHHHHT----TCEEEEECBCTTTCSBCGGGSGGGCCT---TEEEECC---BCGGGCCCCHHHHHHH
T ss_pred CEEEECCCchHHHHHHHHHC----CCEEEEEecCccccCcCHHHHHHhcCC---CceEEEE---ECCCCChhhHHHHHHH
Confidence 88999999999988888766 8888888765 78888887764 6788874 5688999999999999
Q ss_pred HHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCc--cccc-CCccEEee
Q 019931 278 RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLS--KAAG-CQGGFIAC 333 (334)
Q Consensus 278 a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sls--Ka~G-~~GG~i~~ 333 (334)
|++||++||+|++|+.|.... +. ..+..+ |+++.||+ |+++ +.||++++
T Consensus 167 ~~~~~~~li~D~a~~~g~~~~-~~----~~~~~~--di~~~S~s~~K~l~~g~gg~~~~ 218 (391)
T 3dr4_A 167 ARRHNLLVIEDAAEAVGATYR-GK----KSGSLG--DCATFSFFGNAIITTGEGGMITT 218 (391)
T ss_dssp HHHTTCEEEEECTTCTTCEET-TE----ETTSSS--SEEEEECBTTSSSCCBSCEEEEE
T ss_pred HHHcCCEEEEECcccccceEC-Ce----eecccC--CEEEEECCCCCcCCcCCeEEEEE
Confidence 999999999999999875421 11 122222 57777866 9996 46788765
No 188
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=2.1e-18 Score=163.11 Aligned_cols=182 Identities=16% Similarity=0.160 Sum_probs=130.7
Q ss_pred CHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCe
Q 019931 125 HPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKI 204 (334)
Q Consensus 125 ~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd 204 (334)
||++++++.+.. + ...++..+...+|++++++++|.+..+++++|++|+..+++++..++ ...
T Consensus 28 ~p~v~~ai~~~~-~----~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g------------~~~ 90 (359)
T 3pj0_A 28 LTEALQNIDDNL-E----SDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRK------------ENR 90 (359)
T ss_dssp HHHHTTTSCTTC-B----CCBTTBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHH------------TCC
T ss_pred CHHHHHHHHhhc-c----cCcccCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcC------------CCc
Confidence 688888776521 1 12345568889999999999999988888999999999999988762 122
Q ss_pred EEEEcCCCchhhHH--HH-HHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCCCCC-CCccCHHH---
Q 019931 205 AIFSDALNHASIID--GI-RIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLFSMD-GDFAPMVE--- 273 (334)
Q Consensus 205 ~Vl~d~~~H~s~~~--g~-~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~n~~-G~~~pL~~--- 273 (334)
+|+++...|..... .. ... +.+++.++.. |+++|+++ . +++++|++++++|++ |.+.|.++
T Consensus 91 vvi~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~ 162 (359)
T 3pj0_A 91 RVAYHPLSHLEIHEQDGLKELQ----QITPLLLGTANQLLTIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEK 162 (359)
T ss_dssp EEEECTTCHHHHSSTTHHHHHH----CCEEEECSCTTSCCCHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred EEEEeccceeeehhcchHHHhc----CceEEecCCcCCCcCHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHH
Confidence 57777777765432 11 234 7888887754 78888776 2 478999999998886 78878555
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccC-CccEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-QGGFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~~ 334 (334)
|+++|++||++||+|++|..+.....+..... + ....|+++.||||++++ .||+++++
T Consensus 163 l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~--~~~~d~~~~s~sK~~~~~~gg~~~~~ 221 (359)
T 3pj0_A 163 ISEYCHEQGISLHLDGARLWEITPFYQKSAEE-I--CALFDSVYVSFYKGIGGIAGAILAGN 221 (359)
T ss_dssp HHHHHHHHTCEEEEEETTCGGGHHHHTCCHHH-H--HTTCSEEEEESSSTTCCSSCEEEEEC
T ss_pred HHHHHHHcCCEEEEECcchhcchhhhCCCHHH-h--hccCCEEEEeccccCCCcceEEEECC
Confidence 59999999999999999976543211211111 1 13468889999999965 45677653
No 189
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=1.4e-17 Score=158.33 Aligned_cols=189 Identities=13% Similarity=0.079 Sum_probs=133.6
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCC------CcEEEeccHHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKK------EDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~------e~alv~~sG~~An~~ai~ 183 (334)
+.++|..+- ..-+|++++++.++..... .........+++++++++++. +.++++++|++|+..++.
T Consensus 5 ~~~~~~p~p---~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 5 VDTLLIPGP---IILSGAVQKALDVPSLGHT----SPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCEECSSSS---CCCCHHHHHTTSCCCCCTT----SHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred cceeecCCC---cCchHHHHHHHhccccccC----CHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence 345555552 2346888888776543211 111123457788899998875 356777999999999999
Q ss_pred HHh---hhhhhccCCCccCCCCCeEE-EEcC-CCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHHHHhcCCCC
Q 019931 184 AVG---NIASLLAGDEKSFKDEKIAI-FSDA-LNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKTLLSCCTMR 252 (334)
Q Consensus 184 al~---~~~~~~~~~~~~~~~~gd~V-l~d~-~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~~l~~~~~~ 252 (334)
++. ++ ||.| +.+. .+|.++...++.. |.+++.++. .|+++|++++++ .+
T Consensus 78 ~~~~~~~~--------------gd~vlv~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~~d~~~l~~~l~~--~~ 137 (385)
T 2bkw_A 78 NFILSKAP--------------NKNVLVVSTGTFSDRFADCLRSY----GAQVDVVRPLKIGESVPLELITEKLSQ--NS 137 (385)
T ss_dssp HHSCTTCS--------------CCEEEEECSSHHHHHHHHHHHHT----TCEEEEECCSSTTSCCCHHHHHHHHHH--SC
T ss_pred HHhccCCC--------------CCeEEEEcCCcchHHHHHHHHHc----CCceEEEecCCCCCCCCHHHHHHHHhc--CC
Confidence 876 43 5655 4434 3444443444444 788888876 389999999975 25
Q ss_pred cEEEEEcCCCCCCCCccCHHHHHHHHHHc--CCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCccccc-CCc
Q 019931 253 KKVVVTDSLFSMDGDFAPMVELVKLRRKY--GFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAG-CQG 328 (334)
Q Consensus 253 ~~lVv~e~v~n~~G~~~pL~~L~ela~k~--ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G-~~G 328 (334)
+++|++++++|++|.+.|+++|.++|++| |++||+|++|+.|... +++. .++|+++.|+||+++ +.|
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~G 208 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE---------FEFDEWGVDFALTASQKAIGAPAG 208 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSC---------CCTTTTTCSEEEEESSSTTCCCSC
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcc---------ccccccCceEEEecCccccccCCc
Confidence 78999999999999999999999999999 9999999999865321 1111 246899999999875 466
Q ss_pred -cEEeeC
Q 019931 329 -GFIACR 334 (334)
Q Consensus 329 -G~i~~~ 334 (334)
|+++++
T Consensus 209 ~G~~~~~ 215 (385)
T 2bkw_A 209 LSISLCS 215 (385)
T ss_dssp EEEEEEC
T ss_pred ceEEEEc
Confidence 777653
No 190
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.75 E-value=2.8e-17 Score=163.64 Aligned_cols=207 Identities=12% Similarity=0.054 Sum_probs=139.9
Q ss_pred EEEeecCccCCCCCC----HHHHHHHHHhcCCCCccccccCchHHHHHHHHH----HHhHhCC---CcEEEeccHHHHHH
Q 019931 111 LLLFSGNDYLGLSSH----PTIAKAAARHGMGPRGSALICGYTNYHRLLESC----LADLKKK---EDCLLCPTGFAANM 179 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~----p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~----La~~~g~---e~alv~~sG~~An~ 179 (334)
.+++.++.||++... |.+.+++..+..+. +....+..+...++|++ |++++|. +.++++++|++||.
T Consensus 95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~--~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~ 172 (497)
T 2qma_A 95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQ--SMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQ 172 (497)
T ss_dssp SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCC--CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHH
T ss_pred CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcc--cccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHH
Confidence 457888889998854 45555554443332 22334445555666666 8888886 45788899999999
Q ss_pred HHHHHHhhhh-------hhccCCCccCCCCCe-EEEEcCCCchhhHHHHHHhhhcCCc-EEEEeeCC-----CHHHHHHH
Q 019931 180 AVIVAVGNIA-------SLLAGDEKSFKDEKI-AIFSDALNHASIIDGIRIAERTKMV-EVFVYKHC-----DMSHLKTL 245 (334)
Q Consensus 180 ~ai~al~~~~-------~~~~~~~~~~~~~gd-~Vl~d~~~H~s~~~g~~ls~~~~g~-~v~~~~~~-----D~~~Le~~ 245 (334)
.++.++.... ....++.... .++ .|+++...|.++..++++... +. +++.++.+ |+++|+++
T Consensus 173 ~al~~ar~~~~~~~~~~~~~~~G~~~~--~g~~~v~~s~~~h~s~~~~~~~~g~--g~~~v~~v~~~~~~~~d~~~L~~~ 248 (497)
T 2qma_A 173 MGLMLARDWIADKLSGHSIQKLGLPDY--ADKLRIVCSKKSHFTVQKSASWMGL--GEKAVMTVDANADGTMDITKLDEV 248 (497)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCSCGG--GGGEEEEEETTSCTHHHHHHHHTTS--CGGGEEEECBCTTSSBCGGGHHHH
T ss_pred HHHHHHHHHHHHhhcccchhhcccccc--cCCeEEEECCCchHHHHHHHHHcCC--CcccEEEEecCCCCcCCHHHHHHH
Confidence 9998742100 0000000000 034 788888999999988887621 22 67777765 89999999
Q ss_pred HhcCC-CC--cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcc
Q 019931 246 LSCCT-MR--KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSK 322 (334)
Q Consensus 246 l~~~~-~~--~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsK 322 (334)
+++.. .+ +.+|++..+.|++|.+.|+++|.++|++||++|++|+||+.+.+....... ..++ .++|+++.|++|
T Consensus 249 i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~--~~gi-~~~D~i~~s~hK 325 (497)
T 2qma_A 249 IAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSR--LKGV-ERAHSISVDFHK 325 (497)
T ss_dssp HHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGG--GTTG-GGCSEEEEETTT
T ss_pred HHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHh--hcCc-ccCCEEEEcchh
Confidence 97531 12 347888888999999999999999999999999999999977653221111 1233 356899999999
Q ss_pred cccC
Q 019931 323 AAGC 326 (334)
Q Consensus 323 a~G~ 326 (334)
.+++
T Consensus 326 ~l~~ 329 (497)
T 2qma_A 326 LFYQ 329 (497)
T ss_dssp TTCC
T ss_pred ccCC
Confidence 8865
No 191
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.75 E-value=6.5e-17 Score=161.52 Aligned_cols=191 Identities=16% Similarity=0.147 Sum_probs=139.5
Q ss_pred CHHHHHHHHH-hcC----CCCccccccCchHHHHHHHHHHHhHhC----CCcEEEeccHHHHHHHHHHHHh-hhhhhccC
Q 019931 125 HPTIAKAAAR-HGM----GPRGSALICGYTNYHRLLESCLADLKK----KEDCLLCPTGFAANMAVIVAVG-NIASLLAG 194 (334)
Q Consensus 125 ~p~v~~a~~~-~g~----g~~~sr~~~G~~~~~~~LE~~La~~~g----~e~alv~~sG~~An~~ai~al~-~~~~~~~~ 194 (334)
++.+++++.+ ... +..++....|...+++++++.+.+..| .+.++++++|++|+..++.+++ .+
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~------ 181 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNE------ 181 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCST------
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCC------
Confidence 5556664433 222 344566666776777777777766655 3578888999999999999886 43
Q ss_pred CCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEee-------CCCHHHHHHHHhcC---CCCcEEEEEcCCCCC
Q 019931 195 DEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYK-------HCDMSHLKTLLSCC---TMRKKVVVTDSLFSM 264 (334)
Q Consensus 195 ~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~-------~~D~~~Le~~l~~~---~~~~~lVv~e~v~n~ 264 (334)
||.|+++.+.|.++...++.. |++++.|+ +.|+++|++++++. ..++++|++.+++||
T Consensus 182 --------gd~Vlv~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NP 249 (500)
T 3tcm_A 182 --------KDGILVPIPQYPLYSASIALH----GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249 (500)
T ss_dssp --------TEEEEEEESCCTHHHHHHHHT----TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTT
T ss_pred --------CCEEEEeCCCcHhHHHHHHHc----CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCC
Confidence 889999999999998888877 88888887 55899999999753 125788888899999
Q ss_pred CCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcc--cc---cccCC-CCCc-cEEEecCcccc-cC---CccE
Q 019931 265 DGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGG--VA---EQFNC-ERDV-DICVGTLSKAA-GC---QGGF 330 (334)
Q Consensus 265 ~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g--~~---~~~~~-~~~~-Div~~SlsKa~-G~---~GG~ 330 (334)
+|.+.+ +++|+++|++||+++|+||+|+.++++..... +. ..++. ..++ .|+++||||+| |. .+||
T Consensus 250 tG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~ 329 (500)
T 3tcm_A 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGY 329 (500)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEE
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEE
Confidence 999877 66777789999999999999998877532211 11 12222 2222 37789999999 43 5588
Q ss_pred Eee
Q 019931 331 IAC 333 (334)
Q Consensus 331 i~~ 333 (334)
+++
T Consensus 330 ~~~ 332 (500)
T 3tcm_A 330 FEI 332 (500)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 192
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.2e-17 Score=165.95 Aligned_cols=208 Identities=12% Similarity=0.063 Sum_probs=145.1
Q ss_pred EeecCccCCCC--CCHHHHHHH----HHhcC-CCCccccccCchHHHHHHHHHHHhHhCCC----cEEEeccHHHHHHHH
Q 019931 113 LFSGNDYLGLS--SHPTIAKAA----ARHGM-GPRGSALICGYTNYHRLLESCLADLKKKE----DCLLCPTGFAANMAV 181 (334)
Q Consensus 113 ~f~sn~yLgl~--~~p~v~~a~----~~~g~-g~~~sr~~~G~~~~~~~LE~~La~~~g~e----~alv~~sG~~An~~a 181 (334)
.+.++.++|.. .++.+.+++ .++.. +...+....|...+.+++.+.+++++|.+ .++++++|++|+..+
T Consensus 63 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a 142 (497)
T 3mc6_A 63 QWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLA 142 (497)
T ss_dssp CGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHH
T ss_pred CCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHH
Confidence 34455666653 456776644 33322 11222223344566677888888898876 578889999999999
Q ss_pred HHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEE
Q 019931 182 IVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 182 i~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~l 255 (334)
+.++.....- .++ ..++.|++....|.++...++.. |.+++.++.+ |+++|++++++ ++++
T Consensus 143 ~~a~~~~~~~-~~g-----~~~~~Vi~~~~~h~~~~~~~~~~----G~~~~~v~~~~~~~~~d~~~l~~~i~~---~~~~ 209 (497)
T 3mc6_A 143 CLSAKMYALH-HRG-----ITEPEIIAPVTAHAGFDKAAYYF----GMKLRHVELDPTTYQVDLGKVKKFINK---NTVL 209 (497)
T ss_dssp HHHHHHHHHH-HSC-----CSSCEEEEETTSCHHHHHHHHHS----CCEEEEECBCTTTCSBCTTTTGGGCCS---SEEE
T ss_pred HHHHHHHHHh-cCC-----CCCceEEEeCCccHHHHHHHHHc----CCeEEEEecCcccCcCCHHHHHHHHhh---CCEE
Confidence 9987652100 000 01378888999999999888877 8888887743 57888888764 6899
Q ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccccccc---CCCcccccccC-CCCCccEEEecCcccc-cCCc-c
Q 019931 256 VVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCG---KNGGGVAEQFN-CERDVDICVGTLSKAA-GCQG-G 329 (334)
Q Consensus 256 Vv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G---~~G~g~~~~~~-~~~~~Div~~SlsKa~-G~~G-G 329 (334)
|++++++|++|.+.|+++|.++|++||++||+|++|+.++.. ..|.+....+. ...++|+++.|++|.+ ++.| |
T Consensus 210 v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g 289 (497)
T 3mc6_A 210 LVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSS 289 (497)
T ss_dssp EEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCE
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCce
Confidence 999999999999999999999999999999999999855321 12323221122 2356899999999996 4444 6
Q ss_pred EEee
Q 019931 330 FIAC 333 (334)
Q Consensus 330 ~i~~ 333 (334)
++++
T Consensus 290 ~~~~ 293 (497)
T 3mc6_A 290 VIMY 293 (497)
T ss_dssp EEEC
T ss_pred eEEe
Confidence 6654
No 193
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.75 E-value=4.6e-17 Score=162.72 Aligned_cols=180 Identities=10% Similarity=0.070 Sum_probs=131.6
Q ss_pred CCccccccCchHHHHHHHHHHHhHhC-----CCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCc
Q 019931 139 PRGSALICGYTNYHRLLESCLADLKK-----KEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNH 213 (334)
Q Consensus 139 ~~~sr~~~G~~~~~~~LE~~La~~~g-----~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H 213 (334)
..++....|...+.+++++.+.++.| .+++++++++++|+..++.+++.+++ .++|.|+++.+.|
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd----------~~~d~Vlv~~p~y 191 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGG----------KSRTGVMIPIPQY 191 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCG----------GGSEEEEEEESCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCC----------CCCCEEEEeCCCc
Confidence 34566677777888888888887764 35788899999999999998876410 0146899999999
Q ss_pred hhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhcCCC--CcEEEEEcCCCCCCCCccC---HHHHHHHHHHc
Q 019931 214 ASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSCCTM--RKKVVVTDSLFSMDGDFAP---MVELVKLRRKY 281 (334)
Q Consensus 214 ~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~~~~--~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ 281 (334)
.++...+... |++++.|+++ |+++|++++++.+. ++++|++.+++||+|.+.+ +++|+++|++|
T Consensus 192 ~~~~~~~~~~----g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~ 267 (498)
T 3ihj_A 192 PLYSAVISEL----DAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE 267 (498)
T ss_dssp THHHHHHHHT----TCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHc----CCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 9998888877 8899988865 89999999976321 4788888899999999876 67799999999
Q ss_pred CCEEEEecCcccccccCCCc--ccccc---cCCC--CCc-cEEEecCcccc-cC---CccEEe
Q 019931 282 GFLLVLDDAHGTFVCGKNGG--GVAEQ---FNCE--RDV-DICVGTLSKAA-GC---QGGFIA 332 (334)
Q Consensus 282 ga~LivDeAh~~Gv~G~~G~--g~~~~---~~~~--~~~-Div~~SlsKa~-G~---~GG~i~ 332 (334)
|++||+||+|+.++++.... .+... .+.. .++ .|+++||||+| |. .+||++
T Consensus 268 ~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~ 330 (498)
T 3ihj_A 268 KLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYME 330 (498)
T ss_dssp TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEE
T ss_pred CcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEE
Confidence 99999999999888764211 11110 0000 112 37889999999 43 568886
No 194
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.75 E-value=1.5e-17 Score=163.84 Aligned_cols=203 Identities=12% Similarity=0.088 Sum_probs=138.2
Q ss_pred eeEEEeecCccCCCCCCHHHHH----HHHHhcCC-CCcccc-ccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAK----AAARHGMG-PRGSAL-ICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMA 180 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~----a~~~~g~g-~~~sr~-~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ 180 (334)
+.++.|.+|. +|.. ++.+.+ ++.+|+.. ..+++. ..+.....+++++++++++|.+ .+++++++++++..
T Consensus 66 ~~~iyld~~~-~g~~-p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~ 143 (465)
T 3e9k_A 66 ENAIYFLGNS-LGLQ-PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHL 143 (465)
T ss_dssp CBCEECBTTT-SCCE-ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHH
T ss_pred CCeEEecCCc-cCCC-hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHH
Confidence 4555666664 6754 444544 34444321 111111 1233456688999999999964 67788888999999
Q ss_pred HHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEE-----EEeeC-----CCHHHHHHHHhcCC
Q 019931 181 VIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEV-----FVYKH-----CDMSHLKTLLSCCT 250 (334)
Q Consensus 181 ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v-----~~~~~-----~D~~~Le~~l~~~~ 250 (334)
++.++.+++ ++++.|+++...|.+....+.......|.++ ...+. .|+++|++++++..
T Consensus 144 ~~~~~~~~~-----------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~ 212 (465)
T 3e9k_A 144 LMLSFFKPT-----------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG 212 (465)
T ss_dssp HHHHHCCCC-----------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG
T ss_pred HHHHhcccc-----------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC
Confidence 998887642 2367788888888886554331111114442 23332 28999999997432
Q ss_pred CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCC-CCCccEEEecCcccc--cCC
Q 019931 251 MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNC-ERDVDICVGTLSKAA--GCQ 327 (334)
Q Consensus 251 ~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~-~~~~Div~~SlsKa~--G~~ 327 (334)
+++++|++++++|++|.+.|+++|.++|++||+++++|++|+.|.... ++ ..++|++++|++|.+ |..
T Consensus 213 ~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~---------~~~~~~~D~~~~s~~K~l~~gp~ 283 (465)
T 3e9k_A 213 DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL---------YLHDWGVDFACWCSYKYLNAGAG 283 (465)
T ss_dssp GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---------CHHHHTCCEEEECSSSTTCCCTT
T ss_pred CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC---------chhhcCCCEEEECcccccccCCC
Confidence 378999999999999999999999999999999999999999765321 11 135789999999999 444
Q ss_pred c-cEEee
Q 019931 328 G-GFIAC 333 (334)
Q Consensus 328 G-G~i~~ 333 (334)
| |++.+
T Consensus 284 ~~g~l~~ 290 (465)
T 3e9k_A 284 GIAGAFI 290 (465)
T ss_dssp CCCEEEE
T ss_pred ceEEEEE
Confidence 4 66554
No 195
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.74 E-value=2.5e-17 Score=158.91 Aligned_cols=178 Identities=13% Similarity=0.119 Sum_probs=133.5
Q ss_pred CCCCHHHHHHHHHhc-CCCCccccccCchHHHHHHHHHH-HhHhC-CCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCc
Q 019931 122 LSSHPTIAKAAARHG-MGPRGSALICGYTNYHRLLESCL-ADLKK-KEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEK 197 (334)
Q Consensus 122 l~~~p~v~~a~~~~g-~g~~~sr~~~G~~~~~~~LE~~L-a~~~g-~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~ 197 (334)
+...|.+++++.+.- .|. ++++.+...+||+++ ++++| .+++++++||++|+..++.++ .++
T Consensus 12 ~~~~~~i~~a~~~~~~~~~-----~~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~--------- 77 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDASHI-----YTNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKK--------- 77 (377)
T ss_dssp CCCGGGGHHHHHHHHHHTC-----CSSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTT---------
T ss_pred CCCcHHHHHHHHHHHHcCC-----cccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCC---------
Confidence 455677777765532 221 222357789999999 99999 889999999999999999887 543
Q ss_pred cCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHH-hcCCCCcEEEEEcCCCCCCCCccC
Q 019931 198 SFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLL-SCCTMRKKVVVTDSLFSMDGDFAP 270 (334)
Q Consensus 198 ~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l-~~~~~~~~lVv~e~v~n~~G~~~p 270 (334)
||.|++..+.|.++...+... |++++.++.+ |+++|++++ ++. .++++|+ +.|++|.+.|
T Consensus 78 -----Gd~Vi~~~~~~~~~~~~~~~~----G~~~~~v~~~~~~~~~d~~~l~~~i~~~~-~~tk~v~---~~~~~G~~~~ 144 (377)
T 3ju7_A 78 -----GKYALMPSFTFPATPLAAIWC----GLEPYFIDISIDDWYMDKTVLWDKIEELK-EEVAIVV---PYATFGSWMN 144 (377)
T ss_dssp -----CCEEEEESSSCTHHHHHHHHT----TCEEEEECBCTTTCSBCHHHHHHHHHHHG-GGEEEEC---CBCGGGBCCC
T ss_pred -----cCEEEECCCCcHHHHHHHHHc----CCEEEEEecCCccCCcCHHHHHHHHhcCC-CCceEEE---EECCCCCccC
Confidence 889999999999988888776 8888888643 899999988 431 1288887 4567899999
Q ss_pred HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC--cccccC-CccEEee
Q 019931 271 MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL--SKAAGC-QGGFIAC 333 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl--sKa~G~-~GG~i~~ 333 (334)
+++|.++|+ ||++||+|++|++|..-. +. ..+ ....|+.+.|| +|.+++ .||++++
T Consensus 145 ~~~i~~la~-~~~~vi~D~a~a~g~~~~-~~----~~g-~~~~d~~~~S~~~~K~l~~g~gG~~~~ 203 (377)
T 3ju7_A 145 LEEYEELEK-KGVPVVVDAAPGFGLMNG-GM----HYG-QDFSGMIIYSFHATKPFGIGEGGLIYS 203 (377)
T ss_dssp CHHHHHHHH-TTCCBEEECTTCTTCEET-TE----ETT-TTCSSEEEEECBTTSSSCCBSCEEEEE
T ss_pred HHHHHHHHh-cCCEEEEECCCccCCeEC-CE----ecc-CCCCcEEEEECCCCCcCCCCCcEEEEE
Confidence 999999999 999999999999875411 11 111 11135666676 699975 5688765
No 196
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.74 E-value=3.6e-17 Score=155.66 Aligned_cols=188 Identities=16% Similarity=0.050 Sum_probs=131.7
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHh
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVG 186 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~ 186 (334)
+++|||++|. -.+..+|.+ ++ ..... +.... ..+|+++++++++.+ .+++++++++|+..++++++
T Consensus 29 ~~~i~l~~~~-~~~~~~~~v--a~----~~~~~----Y~~~~-~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~ 96 (356)
T 1fg7_A 29 NGDVWLNANE-YPTAVEFQL--TQ----QTLNR----YPECQ-PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFC 96 (356)
T ss_dssp TCSEECSSCC-CSSCCCCCC--CC----CCTTS----CCCSS-CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CceEEeeCCC-CCCCCCHhH--hh----hhhcc----CCCcc-HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHh
Confidence 4689999985 234445655 11 11111 11112 478999999999864 57777888999999999887
Q ss_pred hhhhhccCCCccCCCCC-eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcC
Q 019931 187 NIASLLAGDEKSFKDEK-IAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDS 260 (334)
Q Consensus 187 ~~~~~~~~~~~~~~~~g-d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~ 260 (334)
.+ | |.|++..+.|......++.. |.+++.++. .|+++|++.++ ++++|++++
T Consensus 97 ~~--------------g~d~Vl~~~p~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~i~----~~~~v~l~~ 154 (356)
T 1fg7_A 97 EP--------------GKDAILYCPPTYGMYSVSAETI----GVECRTVPTLDNWQLDLQGISDKLD----GVKVVYVCS 154 (356)
T ss_dssp CT--------------TTCEEEECSSSCTHHHHHHHHH----TCEEEECCCCTTSCCCHHHHHTSCT----TEEEEEEES
T ss_pred CC--------------CCCEEEEeCCChHHHHHHHHHc----CCEEEEeeCCCCCCCCHHHHHHHhc----CCCEEEEeC
Confidence 54 6 88888888888888777766 788888875 26777766653 578888899
Q ss_pred CCCCCCCccCHHHHHHHHHH--cCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 261 LFSMDGDFAPMVELVKLRRK--YGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k--~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
++||+|.+.|.++|.++++. +|+++|+||+|+.+. + +..+....+ ..+.++++.||||+||+.| ||++++
T Consensus 155 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~--~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 229 (356)
T 1fg7_A 155 PNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFC--P-QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLAN 229 (356)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGS--G-GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhc--C-CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeC
Confidence 99999999886555444443 899999999998642 1 112222112 1234799999999998766 888764
No 197
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.74 E-value=1.8e-17 Score=157.51 Aligned_cols=188 Identities=10% Similarity=0.007 Sum_probs=130.0
Q ss_pred eEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEE-eccHHHHHHHHHHHH
Q 019931 110 RLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLL-CPTGFAANMAVIVAV 185 (334)
Q Consensus 110 ~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv-~~sG~~An~~ai~al 185 (334)
...||..+. ...+|+|++++.+.-... + ..+..+..+++++++++++|.+ .+++ ++||++|+..+++++
T Consensus 19 ~~~~~~pgp---~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~ 91 (376)
T 3f0h_A 19 GMLNFTVGP---VMSSEEVRAIGAEQVPYF---R-TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNC 91 (376)
T ss_dssp SCEECSSSS---CCCCHHHHHHHTSCCCCC---S-SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHH
T ss_pred CceeecCCC---CCCcHHHHHHhcCCCCCC---C-CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhc
Confidence 344555443 235899999887643321 1 1223467789999999999975 4555 578899999999988
Q ss_pred hhhhhhccCCCccCCCCCeEEEEcCC-CchhhH-HHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEE
Q 019931 186 GNIASLLAGDEKSFKDEKIAIFSDAL-NHASII-DGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~gd~Vl~d~~-~H~s~~-~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~ 258 (334)
.++ ||.|++... +|.... ..+... +++++.++. .|+++|+++++ +++++|++
T Consensus 92 ~~~--------------gd~vi~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~ 150 (376)
T 3f0h_A 92 FTK--------------KDKVLVIDGGSFGHRFVQLCEIH----EIPYVALKLEHGKKLTKEKLYEYDN---QNFTGLLV 150 (376)
T ss_dssp CCT--------------TCCEEEEESSHHHHHHHHHHHHT----TCCEEEEECCTTCCCCHHHHHTTTT---SCCCEEEE
T ss_pred cCC--------------CCeEEEEeCChhhHHHHHHHHHc----CCceEEEeCCCCCCCCHHHHHHhhc---cCceEEEE
Confidence 764 565655543 333221 122222 666666653 37888888664 37889999
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEee
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~ 333 (334)
++++|++|.+.|+++|+++|++||++||+|++|+.+... .. ... .++|+++.|++|+|| +.| |++++
T Consensus 151 ~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~---~~-~~~----~~~d~~~~s~~K~l~~~~G~g~~~~ 219 (376)
T 3f0h_A 151 NVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADP---FN-MNE----CGADVMITGSQKVLACPPGISVIVL 219 (376)
T ss_dssp ESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSC---CC-HHH----HTCSEEEEETTTTTCCCSSCEEEEE
T ss_pred ecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcc---cc-ccc----cCccEEEecCcccccCCCceEEEEE
Confidence 999999999999999999999999999999999875321 00 111 236899999999998 455 56654
No 198
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.74 E-value=7.1e-17 Score=160.03 Aligned_cols=191 Identities=17% Similarity=0.144 Sum_probs=135.9
Q ss_pred CCHHHHHHHHHhcCCCCccc---cccCchHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccC
Q 019931 124 SHPTIAKAAARHGMGPRGSA---LICGYTNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSF 199 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr---~~~G~~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~ 199 (334)
.+|.+.+++.+.-.....+. ...|...+..++++.+++++|.+.++++ ++|++|+..++.++... ...+++.
T Consensus 78 ~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~--~~~~Gd~-- 153 (474)
T 1wyu_B 78 YNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAY--HEDRGEG-- 153 (474)
T ss_dssp CCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHH--HHHTTCT--
T ss_pred CCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHH--HHhcCCc--
Confidence 35777776654322211111 2455667889999999999998876645 88899999877665320 0001100
Q ss_pred CCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCc-cCHHH
Q 019931 200 KDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDF-APMVE 273 (334)
Q Consensus 200 ~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~-~pL~~ 273 (334)
+ +.+.|++....|.+....+... |.+++.++.+ |+++|++++++ ++++|+++++ |++|.+ .|+++
T Consensus 154 ~-~r~~Vlv~~~~h~~~~~~~~~~----G~~vv~v~~~~~~~~d~~~L~~~i~~---~t~~v~~~~p-n~~G~~~~~l~~ 224 (474)
T 1wyu_B 154 R-TRRVVLVPDSAHGSNPATASMA----GYQVREIPSGPEGEVDLEALKRELGP---HVAALMLTNP-NTLGLFERRILE 224 (474)
T ss_dssp T-TCCEEEEETTSCTHHHHHHHHT----TCEEEEECBCTTSSBCHHHHHHHCST---TEEEEEECSS-CTTSCCCTTHHH
T ss_pred c-CCCEEEEeCCcChhhHHHHHHC----CCEEEEecCCCCCCcCHHHHHHhhCC---CceEEEEECC-CCCcccCCCHHH
Confidence 0 1237777889999988887776 8899888875 89999999864 6889988887 579988 69999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC-------ccEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ-------GGFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~-------GG~i~~~ 334 (334)
|.++|++||++||+|++|+.+++|.. -...+ ++|++++|++|+|++. .|+++++
T Consensus 225 i~~l~~~~g~~li~Dea~~~~~~g~~---~~~~~----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~ 285 (474)
T 1wyu_B 225 ISRLCKEAGVQLYYDGANLNAIMGWA---RPGDM----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVK 285 (474)
T ss_dssp HHHHHHHHTCEEEEEGGGGGGTTTTC---CHHHH----TCSEEECCTTTTTCCCCTTSCCCCCCEEEC
T ss_pred HHHHHHHcCCEEEEeCchhhhhccCC---CcccC----CCcEEEEeCccccccCCCCCCCCeEEEEEc
Confidence 99999999999999999987765421 11112 3689999999999753 3677653
No 199
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.74 E-value=6e-17 Score=155.48 Aligned_cols=182 Identities=16% Similarity=0.072 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEK 203 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~g 203 (334)
-+|++++++.+.-... .++..+...++|+++++++|.++++++++|++|+..++.++.... ....+++
T Consensus 13 ~~~~~~~a~~~~~~~~-----~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~-------~~~~~~g 80 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDSK-----MFTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTK-------KPRLKKG 80 (390)
T ss_dssp CCHHHHHHHHHHHHHT-----CCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSS-------SCSCCTT
T ss_pred CCHHHHHHHHHHHHcC-----CCCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhh-------hcCCCCc
Confidence 3788888775542210 122357789999999999999999999999999999998872100 0001247
Q ss_pred eEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHH
Q 019931 204 IAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKL 277 (334)
Q Consensus 204 d~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~el 277 (334)
|.|++....|.++...++.. |++++.++.+ |+++|++++++ ++++|++. ++.|.+.|+++|.++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~~v~~~---~~~g~~~~~~~i~~l 150 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQY----GLRVKFVDIDINTLNIDIESLKEAVTD---STKAILTV---NLLGNPNNFDEINKI 150 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHT----TCEEEEECBCTTTCSBCHHHHHHHCCT---TEEEEEEE---CGGGCCCCHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHc----CCEEEEEecCccccCcCHHHHHHHhCc---CCeEEEEE---CCccChhhHHHHHHH
Confidence 88999999999998888766 8888888764 78999998864 67877765 356888999999999
Q ss_pred HHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecC--ccccc-CCccEEeeC
Q 019931 278 RRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTL--SKAAG-CQGGFIACR 334 (334)
Q Consensus 278 a~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~Sl--sKa~G-~~GG~i~~~ 334 (334)
|++||++||+|++|+.|... .+ ..++.. .|+.+.|+ +|.++ +.||+++++
T Consensus 151 ~~~~~~~li~D~a~~~g~~~-~~----~~~g~~--~~~~~~s~~~~k~~~~g~gG~~~~~ 203 (390)
T 3b8x_A 151 IGGRDIILLEDNCESMGATF-NN----KCAGTF--GLMGTFSSFYSNHIATMEGGCIVTD 203 (390)
T ss_dssp HTTSCCEEEEECTTCTTCEE-TT----EETTSS--SSEEEEECCTTSSSCSSSCEEEEES
T ss_pred HHHcCCEEEEECcCcccCEE-CC----cccccc--cceEEEEccCCCCCccCCceEEEeC
Confidence 99999999999999987543 22 123332 24554443 56664 368888763
No 200
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.73 E-value=3.9e-17 Score=156.21 Aligned_cols=177 Identities=11% Similarity=0.052 Sum_probs=129.6
Q ss_pred CCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCC
Q 019931 124 SHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFK 200 (334)
Q Consensus 124 ~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~ 200 (334)
-+|.+++++.+.-.+. +.........++++++++++|.+ .++++++|++|+..++.+++++
T Consensus 29 ~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~------------ 92 (396)
T 2ch1_A 29 CSKRVLTAMTNTVLSN----FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEE------------ 92 (396)
T ss_dssp CCHHHHHHTTSCCCCT----TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCT------------
T ss_pred CCHHHHHHhccccccC----CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCC------------
Confidence 3688888776543221 11111245789999999999975 3667789999999999988754
Q ss_pred CCCeEEEEcCCCchhhH--HHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHH
Q 019931 201 DEKIAIFSDALNHASII--DGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVE 273 (334)
Q Consensus 201 ~~gd~Vl~d~~~H~s~~--~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~ 273 (334)
||.|++..+.|.+.. ..++.. |++++.++. .|+++|++++++. ++++|++++++|++|.+.|+++
T Consensus 93 --gd~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~~~~ 164 (396)
T 2ch1_A 93 --GDRVLIAVNGIWAERAVEMSERY----GADVRTIEGPPDRPFSLETLARAIELH--QPKCLFLTHGDSSSGLLQPLEG 164 (396)
T ss_dssp --TCEEEEEESSHHHHHHHHHHHHT----TCEEEEEECCTTSCCCHHHHHHHHHHH--CCSEEEEESEETTTTEECCCTT
T ss_pred --CCeEEEEcCCcccHHHHHHHHHc----CCceEEecCCCCCCCCHHHHHHHHHhC--CCCEEEEECCCCCCceecCHHH
Confidence 777888777887753 233333 788888773 5899999998742 4788899999999999999999
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCC-CCccEEEecCcccccC-Cc-cEEee
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
|.++|++||++||+||+|++|... ..+. .++|+++.|++|.+++ .| |++++
T Consensus 165 i~~l~~~~~~~li~Dea~~~g~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~ 218 (396)
T 2ch1_A 165 VGQICHQHDCLLIVDAVASLCGVP---------FYMDKWEIDAVYTGAQKVLGAPPGITPISI 218 (396)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTBC---------CCTTTTTCCEEECCCC-CCCCCSSCEEEEE
T ss_pred HHHHHHHcCCEEEEEccccccCCc---------cchhhcCcCEEEEcCCccccCCCCeEEEEE
Confidence 999999999999999999865221 1111 2358999999998764 34 66654
No 201
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.73 E-value=2.2e-17 Score=154.64 Aligned_cols=178 Identities=17% Similarity=0.069 Sum_probs=127.4
Q ss_pred CCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhCCC---c-EEEeccHHHHHHHHHHHHhhhhhhccCCCcc
Q 019931 123 SSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKKKE---D-CLLCPTGFAANMAVIVAVGNIASLLAGDEKS 198 (334)
Q Consensus 123 ~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e---~-alv~~sG~~An~~ai~al~~~~~~~~~~~~~ 198 (334)
..+|.|++++.++... ++ .........++++++++++|.+ + ++++++|++|+..++.++.
T Consensus 10 ~~~~~v~~a~~~~~~~---~~-~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~------------ 73 (353)
T 2yrr_A 10 PIPERVQKALLRPMRG---HL-DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD------------ 73 (353)
T ss_dssp CCCHHHHGGGGSCCCC---TT-CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS------------
T ss_pred CCCHHHHHHHhccccc---cc-CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc------------
Confidence 4579999988765432 11 1122355789999999999973 3 5666888999998887653
Q ss_pred CCCCCeEEEEcCCCchhh--HHHHHHhhhcCCcEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH
Q 019931 199 FKDEKIAIFSDALNHASI--IDGIRIAERTKMVEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM 271 (334)
Q Consensus 199 ~~~~gd~Vl~d~~~H~s~--~~g~~ls~~~~g~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL 271 (334)
+ |.|++....|.+. ...++.. |.+++.++. .|+++|++++++. ++++|++++++|++|.+.|+
T Consensus 74 ---~-d~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~~ 143 (353)
T 2yrr_A 74 ---R-GPVLVLVNGAFSQRVAEMAALH----GLDPEVLDFPPGEPVDPEAVARALKRR--RYRMVALVHGETSTGVLNPA 143 (353)
T ss_dssp ---C-CCEEEEECSHHHHHHHHHHHHT----TCCEEEEECCTTSCCCHHHHHHHHHHS--CCSEEEEESEETTTTEECCH
T ss_pred ---C-CcEEEEcCCCchHHHHHHHHHc----CCceEEEeCCCCCCCCHHHHHHHHHhC--CCCEEEEEccCCCcceecCH
Confidence 1 3455555566664 2222223 777877774 4899999999752 57889999999999999999
Q ss_pred HHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEeeC
Q 019931 272 VELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIACR 334 (334)
Q Consensus 272 ~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~~ 334 (334)
++|.++|++||+++|+|++|++|.. ...+ ..+ ++|++++|++|+++ +.| |+++++
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~~~~---~~~~-~~~----~~d~~~~s~~K~~~~~~g~G~~~~~ 200 (353)
T 2yrr_A 144 EAIGALAKEAGALFFLDAVTTLGML---PFSM-RAM----GVDYAFTGSQKCLSAPPGLAPIAAS 200 (353)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTS---CCCH-HHH----TCSEEECCTTSTTCCCSSCEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEcCcccccc---cccc-ccc----CceEEEecCcccccCCCceEEEEEC
Confidence 9999999999999999999975432 1111 111 35899999999774 455 787653
No 202
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.73 E-value=6e-17 Score=156.15 Aligned_cols=158 Identities=15% Similarity=0.185 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHhHhCCCcEEEeccHHHHHHHHHHHH-hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLCPTGFAANMAVIVAV-GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~~sG~~An~~ai~al-~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
+...+|++++++++|.+.++++++|++|+..++.++ ..+ ||.|++..+.|.+....++.. |
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~--------------gd~Vl~~~~~~~~~~~~~~~~----g 93 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQ--------------DDIVLASSFTFIASVAPICYL----K 93 (394)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCT--------------TCEEEEESSSCGGGTHHHHHT----T
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCC--------------CCEEEECCCccHHHHHHHHHc----C
Confidence 667999999999999999999999999999999987 543 788998999999988888776 8
Q ss_pred cEEEEeeC-----CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCccc
Q 019931 229 VEVFVYKH-----CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV 303 (334)
Q Consensus 229 ~~v~~~~~-----~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~ 303 (334)
++++.++. .|+++|++++++.+.++++|++++ ++|...|+++|.++|+++|++||+|++|+.|.. ..|...
T Consensus 94 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-~~~~~~ 169 (394)
T 1o69_A 94 AKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSF-YKNKAL 169 (394)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEET
T ss_pred CEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccce-eCCccc
Confidence 88888874 388999999875322477887775 689999999999999999999999999997643 222211
Q ss_pred ccccCCCCCccEEEecCcccccC-CccEEee
Q 019931 304 AEQFNCERDVDICVGTLSKAAGC-QGGFIAC 333 (334)
Q Consensus 304 ~~~~~~~~~~Div~~SlsKa~G~-~GG~i~~ 333 (334)
+-..++|+...|.+|.+++ .+|++++
T Consensus 170 ----~~~~~~~~~s~s~~K~l~~~~~G~~~~ 196 (394)
T 1o69_A 170 ----GTFGEFGVYSYNGNKIITTSGGGMLIG 196 (394)
T ss_dssp ----TSSSSEEEEECCTTSSSCCSSCEEEEE
T ss_pred ----ccccCcEEEEEeCCccCCCCCceEEEE
Confidence 1112456665566898864 5688876
No 203
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.73 E-value=1.6e-17 Score=173.14 Aligned_cols=166 Identities=16% Similarity=0.055 Sum_probs=124.3
Q ss_pred cCchHHHHHHHHHHHhHhCCCcEEEeccHH-HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHH-HHHh
Q 019931 146 CGYTNYHRLLESCLADLKKKEDCLLCPTGF-AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDG-IRIA 223 (334)
Q Consensus 146 ~G~~~~~~~LE~~La~~~g~e~alv~~sG~-~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g-~~ls 223 (334)
.+....+.++|+.+|+++|.+.++++++|+ +||.+++.+++++ ||.|++++++|.++..+ ++++
T Consensus 169 ~~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~p--------------GD~VLv~~~~H~S~~~~~~~l~ 234 (730)
T 1c4k_A 169 LIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSN--------------GDLVLFDRNNHKSVYNSALAMA 234 (730)
T ss_dssp TTTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCT--------------TCEEEEETTCCHHHHHHHTTTT
T ss_pred cCChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCC--------------CCEEEEcCCchHHHHHHHHHHC
Confidence 344567899999999999999988887775 8999999998765 89999999999999988 6666
Q ss_pred hhcCCcEEEEeeC----------CCHHHH-----HHHHhcCCCC---c----EEEEEcCCCCCCCCccCHHHHHHHHHHc
Q 019931 224 ERTKMVEVFVYKH----------CDMSHL-----KTLLSCCTMR---K----KVVVTDSLFSMDGDFAPMVELVKLRRKY 281 (334)
Q Consensus 224 ~~~~g~~v~~~~~----------~D~~~L-----e~~l~~~~~~---~----~lVv~e~v~n~~G~~~pL~~L~ela~k~ 281 (334)
|++++.++. .|+++| ++++++..++ + ++|+++++ |++|.+.|+++|+++|++|
T Consensus 235 ----Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~ 309 (730)
T 1c4k_A 235 ----GGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHL 309 (730)
T ss_dssp ----CCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGG
T ss_pred ----CCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHc
Confidence 788776542 278888 8888653101 2 66666666 4799999999999999999
Q ss_pred CCEEEEecCccccc-ccCCCcccccccCC-CCCcc----EEEecCcccccC--CccEE
Q 019931 282 GFLLVLDDAHGTFV-CGKNGGGVAEQFNC-ERDVD----ICVGTLSKAAGC--QGGFI 331 (334)
Q Consensus 282 ga~LivDeAh~~Gv-~G~~G~g~~~~~~~-~~~~D----iv~~SlsKa~G~--~GG~i 331 (334)
|++|++|+||+.++ +++.+.|.. .... ..++| +++.|+||++++ .||++
T Consensus 310 g~~livDeAh~~~~~f~~~~~g~~-~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I 366 (730)
T 1c4k_A 310 CDYIEFDSAWVGYEQFIPMMRNSS-PLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQI 366 (730)
T ss_dssp BSEEEEECTTCCGGGSSGGGGGGC-TTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEE
T ss_pred CCeEEEEcccccccccCcccCCcC-cccccccCCCCCCEEEEECCCCCCCCCCCEEEE
Confidence 99999999998653 333222110 1111 12345 999999999976 35666
No 204
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.72 E-value=2.2e-16 Score=158.37 Aligned_cols=168 Identities=17% Similarity=0.148 Sum_probs=122.6
Q ss_pred HHHHHHHH----HHHhHhCCC----cEEEeccHHHHHHHHHHHHhhhh--hhccCCCccCCCCCeEEEEcCCCchhhHHH
Q 019931 150 NYHRLLES----CLADLKKKE----DCLLCPTGFAANMAVIVAVGNIA--SLLAGDEKSFKDEKIAIFSDALNHASIIDG 219 (334)
Q Consensus 150 ~~~~~LE~----~La~~~g~e----~alv~~sG~~An~~ai~al~~~~--~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g 219 (334)
+...++|+ .+++++|.+ .++++++|++||..++.++.... .+..++- ...++++|+++...|.++..+
T Consensus 131 p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~--~~~~~~~v~~s~~~H~s~~~~ 208 (511)
T 3vp6_A 131 PVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM--AAVPKLVLFTSEQSHYSIKKA 208 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG--GGSCCEEEEEETTSCTHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCc--ccCCCeEEEECCCchHHHHHH
Confidence 44455555 556667765 46788999999999998776420 0000000 001367899999999999999
Q ss_pred HHHhhhcCCc---EEEEeeCC-----CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe
Q 019931 220 IRIAERTKMV---EVFVYKHC-----DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLD 288 (334)
Q Consensus 220 ~~ls~~~~g~---~v~~~~~~-----D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivD 288 (334)
+++. |. +++.++.+ |+++||++|++.. ..+++|++++++|++|.+.||++|.++|++||+||++|
T Consensus 209 ~~~~----g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 209 GAAL----GFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp HHHT----TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHc----CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 9887 55 77777765 9999999997531 12789999999999999999999999999999999999
Q ss_pred cCccccccc-CCCcccccccCCCCCccEEEecCcccccC
Q 019931 289 DAHGTFVCG-KNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 289 eAh~~Gv~G-~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+||+.+++. +..+... .++ .++|+++.+++|.|+.
T Consensus 285 ~a~~~~~~~~~~~~~~~--~g~-~~aDsv~~~~hK~l~~ 320 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKL--NGI-ERANSVTWNPHKMMGV 320 (511)
T ss_dssp ETTGGGGGGCTTTGGGG--TTG-GGCSEEEECTTSTTCC
T ss_pred ccchhhHhhChhhhhhc--cCC-ccCCEEEECcccccCC
Confidence 999987652 1111111 122 3579999999999975
No 205
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.71 E-value=2.1e-17 Score=160.20 Aligned_cols=213 Identities=11% Similarity=0.011 Sum_probs=140.6
Q ss_pred eEEEeecCccCC---CCCCHHHHHHHH--HhcCCCCcccccc-CchHHHHHHHHHHHhHhCC--CcEEEeccHHHHHH--
Q 019931 110 RLLLFSGNDYLG---LSSHPTIAKAAA--RHGMGPRGSALIC-GYTNYHRLLESCLADLKKK--EDCLLCPTGFAANM-- 179 (334)
Q Consensus 110 ~~l~f~sn~yLg---l~~~p~v~~a~~--~~g~g~~~sr~~~-G~~~~~~~LE~~La~~~g~--e~alv~~sG~~An~-- 179 (334)
..+||+.+.. . +..+|.+++++. +.-. .+.....+ +......+|+++++++++. +.+++++++++|+.
T Consensus 26 ~~i~l~~g~p-~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~ 103 (423)
T 3ez1_A 26 LNLNMQRGQP-ADADFDLSNGLLTVLGAEDVRM-DGLDLRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGL 103 (423)
T ss_dssp CCEESCCCCC-CHHHHHTTGGGGGSCCGGGCEE-TTEETTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHH
T ss_pred ceEecCCCCC-ChHhCCCcHHHHHHHhhhHHhh-cchhhhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHH
Confidence 3578877642 3 445667777764 3322 11111122 2233347899999999985 35777788888887
Q ss_pred HHHHHHhh--hhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCc
Q 019931 180 AVIVAVGN--IASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRK 253 (334)
Q Consensus 180 ~ai~al~~--~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~ 253 (334)
.++.+++. ++ +.+++..++|.|++..+.|......++.. |.+++.++.+ |+++|++++++. +++
T Consensus 104 ~~~~~l~~~~~g-----~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~----g~~~~~v~~~~~g~d~~~l~~~l~~~-~~~ 173 (423)
T 3ez1_A 104 VLTFALLHGVRG-----STGPWLSQTPKMIVTVPGYDRHFLLLQTL----GFELLTVDMQSDGPDVDAVERLAGTD-PSV 173 (423)
T ss_dssp HHHHHHHTCCTT-----CSSCGGGGCCEEEEEESCCHHHHHHHHHH----TCEEEEEEEETTEECHHHHHHHHHSC-TTE
T ss_pred HHHHHHhccCCC-----ccccccCCCCEEEEcCCCcHHHHHHHHHc----CCEEEeccCCCCCCCHHHHHHHHhhC-CCc
Confidence 78887765 41 00000011578888888888888777777 7888887753 899999999632 368
Q ss_pred EEEEE-cCCCCCCCCccCHH---HHHHHH-HHcCCEEEEecCcccccccC-CCcccccccCC-----CCCccEEEecCcc
Q 019931 254 KVVVT-DSLFSMDGDFAPMV---ELVKLR-RKYGFLLVLDDAHGTFVCGK-NGGGVAEQFNC-----ERDVDICVGTLSK 322 (334)
Q Consensus 254 ~lVv~-e~v~n~~G~~~pL~---~L~ela-~k~ga~LivDeAh~~Gv~G~-~G~g~~~~~~~-----~~~~Div~~SlsK 322 (334)
++|++ .+++||+|.+.|.+ +|+++| ++||++||+||+|+...+.. .+......+.+ .++.+|+++||||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 88865 58999999999866 788888 89999999999999654443 11111111211 3456799999999
Q ss_pred ccc--CCccEEeeC
Q 019931 323 AAG--CQGGFIACR 334 (334)
Q Consensus 323 a~G--~~GG~i~~~ 334 (334)
+++ ...||++++
T Consensus 254 ~~~~G~r~G~~~~~ 267 (423)
T 3ez1_A 254 ITFAGAGLGFVASS 267 (423)
T ss_dssp TSCSSSSCEEEEEC
T ss_pred hccCCcceEEEEeC
Confidence 742 233888764
No 206
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.71 E-value=2e-16 Score=148.78 Aligned_cols=186 Identities=10% Similarity=0.014 Sum_probs=135.2
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHhHhC---C--CcEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCLADLKK---K--EDCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~La~~~g---~--e~alv~~sG~~An~~ai~ 183 (334)
.+++||.+|.+ .+..+|.+++++.++-......+ ++.. ...+++++++++++ . +.++++++|++|+..++.
T Consensus 19 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~--y~~~-~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~ 94 (335)
T 1uu1_A 19 RDKTYLALNEN-PFPFPEDLVDEVFRRLNSDALRI--YYDS-PDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMML 94 (335)
T ss_dssp CCSEEESSCCC-SSCCCHHHHHHHHHTCCGGGGGS--CCCS-SCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHH
T ss_pred CcceECCCCCC-CCCCCHHHHHHHHHHhhhhhhhc--CCCC-chHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHH
Confidence 46899999875 45678999998877542111111 1111 25789999999998 3 467888888999998887
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~ 258 (334)
++ ||.|++. +.|......++.. |.+++.++.+ |+++| +++++|++
T Consensus 95 ~~-----------------gd~Vl~~-p~y~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l--------~~~~~v~l 144 (335)
T 1uu1_A 95 MF-----------------DRSVFFP-PTYSCYRIFAKAV----GAKFLEVPLTKDLRIPEVNV--------GEGDVVFI 144 (335)
T ss_dssp HS-----------------SEEEECS-SSCHHHHHHHHHH----TCEEEECCCCTTSCCCCCCC--------CTTEEEEE
T ss_pred Hh-----------------CCcEEEC-CCcHHHHHHHHHc----CCeEEEeccCCCCCCCHHHc--------CCCCEEEE
Confidence 65 3567778 8888887777666 7888888753 34443 26788888
Q ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 259 DSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 259 e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
.+++||+|.+.|.++|.++++..| ++|+||+|+... + + ......+. .+.+++++||||+||..| ||++++
T Consensus 145 ~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~-~--~-~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~ 217 (335)
T 1uu1_A 145 PNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFH-G--E-SYVDFLKK-YENLAVIRTFSKAFSLAAQRVGYVVAS 217 (335)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHH-C--C-CCGGGGGT-CSSEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhc-c--h-hHHHHhhh-CCCEEEEecchhhcCCcccCeEEEEeC
Confidence 889999999999999999999999 999999998532 1 1 22222222 235799999999998766 888764
No 207
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.71 E-value=8.1e-17 Score=151.50 Aligned_cols=188 Identities=11% Similarity=0.066 Sum_probs=128.4
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHh-cCCC-CccccccCchHHHHHHHHHHHhHhCCC---cEEEeccHHHHHHHHHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARH-GMGP-RGSALICGYTNYHRLLESCLADLKKKE---DCLLCPTGFAANMAVIV 183 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~-g~g~-~~sr~~~G~~~~~~~LE~~La~~~g~e---~alv~~sG~~An~~ai~ 183 (334)
+++++|.... .. .+|.+++++.+. ..+. +.+.......+..+++++++++++|.+ .++++++|++|+..++.
T Consensus 3 ~~~~~~~p~p-~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~ 79 (362)
T 3ffr_A 3 NNKIYFTPGP-SE--LYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQ 79 (362)
T ss_dssp CCCEEECSSS-CC--CCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHH
T ss_pred CcceeccCCC-cC--CCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHH
Confidence 3455665542 22 467888655432 2222 011122233467789999999999863 47778999999999999
Q ss_pred HHhhhhhhccCCCccCCCCCeEEEEcCCCchh-hHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEE
Q 019931 184 AVGNIASLLAGDEKSFKDEKIAIFSDALNHAS-IIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVV 257 (334)
Q Consensus 184 al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s-~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv 257 (334)
++.. + ++|+.....+.. ....+... |++++.++.+ |+++|+ + .+++++|+
T Consensus 80 ~l~~--------------~-~~i~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~~~l~--~---~~~~~~v~ 135 (362)
T 3ffr_A 80 NCVE--------------K-KSFHCVNGSFSKRFYEFAGEL----GREAYKEEAAFGKGFYPADIT--V---PADAEIIC 135 (362)
T ss_dssp HHCS--------------S-EEEEEECSHHHHHHHHHHHHT----TCEEEEEECCTTCCCCGGGCC--C---CTTCCEEE
T ss_pred hccC--------------C-cEEEEcCcHHHHHHHHHHHHh----CCCeEEEecCCCCCCCHHHHh--c---cCCccEEE
Confidence 8764 2 555555444431 22222222 7788777643 778887 3 24789999
Q ss_pred EcCCCCCCCCccCHHHHHHHHHHc-CCEEEEecCcccccccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEee
Q 019931 258 TDSLFSMDGDFAPMVELVKLRRKY-GFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIAC 333 (334)
Q Consensus 258 ~e~v~n~~G~~~pL~~L~ela~k~-ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~ 333 (334)
+++++|++|.+.|+++|.++|++| |+++|+|++|+.+... .++. ++|+++.|++|+|+ +.| |++++
T Consensus 136 ~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~---------~~~~-~~d~~~~s~~K~~~~~~G~g~~~~ 204 (362)
T 3ffr_A 136 LTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPK---------FDWT-KIDSVFFSVQKCFGLPAGLGVWIL 204 (362)
T ss_dssp EESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSC---------CCTT-SCSEEEEETTSTTCCCSCCEEEEE
T ss_pred EEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcc---------cChh-HCcEEEEecccccCCCCceEEEEE
Confidence 999999999999999999999999 9999999999875321 1222 27899999999998 555 66554
No 208
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=1.7e-17 Score=161.40 Aligned_cols=172 Identities=13% Similarity=-0.006 Sum_probs=123.1
Q ss_pred HHHHHHHHHhHhCC--CcEEEeccHHHHHH--HHHHHHhh--hhhhccCCCccCC-CCCeEEEEcCCCchhhHHHHHHhh
Q 019931 152 HRLLESCLADLKKK--EDCLLCPTGFAANM--AVIVAVGN--IASLLAGDEKSFK-DEKIAIFSDALNHASIIDGIRIAE 224 (334)
Q Consensus 152 ~~~LE~~La~~~g~--e~alv~~sG~~An~--~ai~al~~--~~~~~~~~~~~~~-~~gd~Vl~d~~~H~s~~~g~~ls~ 224 (334)
..+|+++|+++++. +++++++++++++. .++.+++. ++ +..++. .+||.|++..+.|......++..
T Consensus 80 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g-----~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~- 153 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNND-----SVQPWSKEETVKWICPVPGYDRHFSITERF- 153 (427)
T ss_dssp CHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTT-----CSSCGGGSSCCEEEEEESCCHHHHHHHHHT-
T ss_pred cHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCc-----ccccccCCCCCEEEEcCCCcHHHHHHHHHc-
Confidence 47789999999886 45777777788883 77777765 31 000000 02788888888888888887777
Q ss_pred hcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEc-CCCCCCCCccCHH---HHHHHH-HHcCCEEEEecCccccc
Q 019931 225 RTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTD-SLFSMDGDFAPMV---ELVKLR-RKYGFLLVLDDAHGTFV 295 (334)
Q Consensus 225 ~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e-~v~n~~G~~~pL~---~L~ela-~k~ga~LivDeAh~~Gv 295 (334)
|.+++.++.+ |+++|+++++. +++++|++. +++||+|.+.|.+ +|+++| ++||+++|+||+|+...
T Consensus 154 ---g~~~~~v~~~~~g~d~~~l~~~l~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~ 228 (427)
T 3ppl_A 154 ---GFEMISVPMNEDGPDMDAVEELVKN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHT 228 (427)
T ss_dssp ---TCEEEEEEEETTEECHHHHHHHTTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred ---CCEEEEeCCCCCCCCHHHHHHHHhc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccc
Confidence 8888887753 89999998853 367888765 8899999999866 888888 99999999999999766
Q ss_pred ccCCCcccccccCC-----CCCccEEEecCcccccC--CccEEeeC
Q 019931 296 CGKNGGGVAEQFNC-----ERDVDICVGTLSKAAGC--QGGFIACR 334 (334)
Q Consensus 296 ~G~~G~g~~~~~~~-----~~~~Div~~SlsKa~G~--~GG~i~~~ 334 (334)
++..+......+.+ ..+.+|+++||||++++ ..||++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~ 274 (427)
T 3ppl_A 229 LTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS 274 (427)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC
T ss_pred cCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC
Confidence 65443222122221 34567999999998422 23888764
No 209
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.71 E-value=2.6e-16 Score=157.36 Aligned_cols=191 Identities=15% Similarity=-0.047 Sum_probs=134.6
Q ss_pred CCCCHHHHHHHHHhcCC-CCccccccCchHHHHHHHHHHHhHhCCC-------cEEEeccHHHHHHHHHHHHhhhhh--h
Q 019931 122 LSSHPTIAKAAARHGMG-PRGSALICGYTNYHRLLESCLADLKKKE-------DCLLCPTGFAANMAVIVAVGNIAS--L 191 (334)
Q Consensus 122 l~~~p~v~~a~~~~g~g-~~~sr~~~G~~~~~~~LE~~La~~~g~e-------~alv~~sG~~An~~ai~al~~~~~--~ 191 (334)
...+|.+.+++.+.-.. ...+....+...+.+++.+.+++++|.+ ..+++++|++||+.++.++..+.. .
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~ 145 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKR 145 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHH
Confidence 34589998887664221 1111111222345556777788899977 346789999999999888765410 0
Q ss_pred ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCCCCC
Q 019931 192 LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLFSMD 265 (334)
Q Consensus 192 ~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~n~~ 265 (334)
...|... ..+.|+++...|.++...+++. |++++.++.+ |+++|++++.+ ++++|++..++|++
T Consensus 146 ~~~G~~~---~~~~vi~~~~~h~s~~~~~~~~----G~~~~~v~~~~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~t 215 (502)
T 3hbx_A 146 KAEGKPV---DKPNIVTGANVQVCWEKFARYF----EVELKEVKLSEGYYVMDPQQAVDMVDE---NTICVAAILGSTLN 215 (502)
T ss_dssp HHTTCCC---SCCEEEEETTCCHHHHHHHHHT----TCEEEEECCBTTBCSCCHHHHHHHCCT---TEEEEEEEBSCTTT
T ss_pred HhcCCCC---CCcEEEEcCCchHHHHHHHHHc----CceeEEEecCCCcCcCCHHHHHHHHhh---CCEEEEEecCCCCC
Confidence 0000000 1237888899999999988887 8888888742 78899988865 68999999999999
Q ss_pred CCccCHHHHHHHHHHc------CCEEEEecCcccccc---cCCCcccccccCCCCCccEEEecCcccccC
Q 019931 266 GDFAPMVELVKLRRKY------GFLLVLDDAHGTFVC---GKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 266 G~~~pL~~L~ela~k~------ga~LivDeAh~~Gv~---G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
|.+.|+++|.++|+++ |++|++|+||+.++. .+.... .+. ..++|+++.|.+|.+++
T Consensus 216 G~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~---~~~-~~~~D~v~~s~hK~l~~ 281 (502)
T 3hbx_A 216 GEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW---DFR-LPLVKSINVSGHKYGLV 281 (502)
T ss_dssp CCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC---STT-STTEEEEEEETTTTTCC
T ss_pred CcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc---ccC-CCCceEEEECcccccCC
Confidence 9999999999999999 999999999986642 222211 122 25789999999999843
No 210
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.70 E-value=5.2e-16 Score=152.48 Aligned_cols=200 Identities=13% Similarity=-0.031 Sum_probs=138.5
Q ss_pred cCCCCCCHHHHHHHHHh-cCCCCccccccCchHHHHHHHHHHHhHhCCCc-------EEEeccHHHHHHHHHHHHhhhhh
Q 019931 119 YLGLSSHPTIAKAAARH-GMGPRGSALICGYTNYHRLLESCLADLKKKED-------CLLCPTGFAANMAVIVAVGNIAS 190 (334)
Q Consensus 119 yLgl~~~p~v~~a~~~~-g~g~~~sr~~~G~~~~~~~LE~~La~~~g~e~-------alv~~sG~~An~~ai~al~~~~~ 190 (334)
|++...+|.+.+++.++ ......+....+...+.+++.+.+++++|.+. ++++++|++||..++.++.....
T Consensus 49 f~~~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~ 128 (452)
T 2dgk_A 49 FCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWR 128 (452)
T ss_dssp CSCCCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred eeCCCchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHH
Confidence 44444678898877653 22222222223444556777788899999652 78889999999999988764100
Q ss_pred --hccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC------CHHHHHHHHhcCCCCcEEEEEcCCC
Q 019931 191 --LLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC------DMSHLKTLLSCCTMRKKVVVTDSLF 262 (334)
Q Consensus 191 --~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~------D~~~Le~~l~~~~~~~~lVv~e~v~ 262 (334)
...++. ...++.|++.. .|.++...+++. |++++.++.+ |+++|++++++ ++++|++..+.
T Consensus 129 ~~~~~~G~---~~~~~~vi~~~-~h~~~~~~~~~~----G~~v~~v~~~~~~~~~d~~~l~~~i~~---~t~~v~~~~~~ 197 (452)
T 2dgk_A 129 KRMEAAGK---PTDKPNLVCGP-VQICWHKFARYW----DVELREIPMRPGQLFMDPKRMIEACDE---NTIGVVPTFGV 197 (452)
T ss_dssp HHHHHTTC---CCSCCEEEESS-CCHHHHHHHHHT----TCEEEECCCBTTBCSCCHHHHHHHCCT---TEEEEECBBSC
T ss_pred HHHHhcCC---CCCCcEEEECC-CcHHHHHHHHHc----CceEEEEecCCCCCeECHHHHHHHHhh---CCEEEEEEcCC
Confidence 000000 00124666666 999998888877 8888888753 78999998864 68999999999
Q ss_pred CCCCCccCHHHHHHHHHHc------CCEEEEecCcccccc---cCCCcccccccCCCCCccEEEecCccccc-CC-ccEE
Q 019931 263 SMDGDFAPMVELVKLRRKY------GFLLVLDDAHGTFVC---GKNGGGVAEQFNCERDVDICVGTLSKAAG-CQ-GGFI 331 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~------ga~LivDeAh~~Gv~---G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~-GG~i 331 (334)
|++|.+.|+++|.++|++| |+++++|+||+.++. .+... . .+. .+++|+++.+++|.+. +. .|++
T Consensus 198 n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~-~~~-~~~~d~~~~~~hK~~~~~~~~G~~ 273 (452)
T 2dgk_A 198 TYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV--W-DFR-LPRVKSISASGHKFGLAPLGCGWV 273 (452)
T ss_dssp TTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC--C-STT-STTEEEEEEETTTTTCCCSSCEEE
T ss_pred cCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch--h-hcC-CCCCcEEEECcccccCCCCCeEEE
Confidence 9999999999999999996 999999999997643 22111 0 112 3568999999999653 22 3666
Q ss_pred ee
Q 019931 332 AC 333 (334)
Q Consensus 332 ~~ 333 (334)
++
T Consensus 274 ~~ 275 (452)
T 2dgk_A 274 IW 275 (452)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 211
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.70 E-value=8.7e-16 Score=152.64 Aligned_cols=171 Identities=15% Similarity=0.035 Sum_probs=123.4
Q ss_pred hHHHHHHHHHH----HhHhCCC------------cEEEeccHHHHHHHHHHHHhhhhh-hc---cCCC-ccCCCCCeEEE
Q 019931 149 TNYHRLLESCL----ADLKKKE------------DCLLCPTGFAANMAVIVAVGNIAS-LL---AGDE-KSFKDEKIAIF 207 (334)
Q Consensus 149 ~~~~~~LE~~L----a~~~g~e------------~alv~~sG~~An~~ai~al~~~~~-~~---~~~~-~~~~~~gd~Vl 207 (334)
.+...++|+++ ++++|.+ ..+++++|++||+.++.+...... -. .++. .....++++|+
T Consensus 113 ~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~ 192 (481)
T 4e1o_A 113 SPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAY 192 (481)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEE
Confidence 45556666655 5566754 357889999999999987654200 00 0000 00001368999
Q ss_pred EcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHH
Q 019931 208 SDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRR 279 (334)
Q Consensus 208 ~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~ 279 (334)
++...|.++..++++. +.+++.++.+ |+++||++|++.. ..+++|+....++++|.+.|+++|.++|+
T Consensus 193 ~s~~~H~s~~~~~~~~----g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~ 268 (481)
T 4e1o_A 193 ASDQAHSSVEKAGLIS----LVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICA 268 (481)
T ss_dssp EETTSCHHHHHHHHHH----TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred EcCcchHHHHHHHHhC----CCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHH
Confidence 9999999999999887 8899988864 9999999997531 12677888888899999999999999999
Q ss_pred HcCCEEEEecCcccccc-cCCCcccccccCCCCCccEEEecCcccccC
Q 019931 280 KYGFLLVLDDAHGTFVC-GKNGGGVAEQFNCERDVDICVGTLSKAAGC 326 (334)
Q Consensus 280 k~ga~LivDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~SlsKa~G~ 326 (334)
+||++|++|+||+.+.+ ++..++.. .++ ..+|.++.+++|.++.
T Consensus 269 ~~~~~lhvDaA~g~~~~~~~~~~~~~--~gi-~~aDsi~~~~hK~l~~ 313 (481)
T 4e1o_A 269 REGLWLHIDAAYAGTAFLCPEFRGFL--KGI-EYADSFTFNPSKWMMV 313 (481)
T ss_dssp HHTCEEEEECTTGGGGGGSGGGGGGG--TTG-GGCSEEEECHHHHSSC
T ss_pred HcCCeEEeehhhHHHHHhChhhHHHh--cCc-ccCCEEEEChHHhcCC
Confidence 99999999999997743 32222221 132 2468999999999975
No 212
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.69 E-value=7e-17 Score=157.46 Aligned_cols=165 Identities=16% Similarity=0.120 Sum_probs=111.9
Q ss_pred HHHHHHHHHhHh--------CCCcEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCe--------------EEE-E
Q 019931 152 HRLLESCLADLK--------KKEDCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKI--------------AIF-S 208 (334)
Q Consensus 152 ~~~LE~~La~~~--------g~e~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd--------------~Vl-~ 208 (334)
..+|++++++++ ..++++++++|++|+..++.+++.+ +| .|+ .
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~--------------gd~~~~~~~~~~g~~~~vi~~ 150 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGA--------------FVNEHSQDKESKSVDKSILLP 150 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEE--------------EECC-------CEEEEEEEES
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCC--------------CccccccccccccccceEEEe
Confidence 467777777776 2467899999999999999988765 43 444 4
Q ss_pred cCCCchhhHHHHHH--hhhcCCcEEEEee----------CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHH
Q 019931 209 DALNHASIIDGIRI--AERTKMVEVFVYK----------HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVE 273 (334)
Q Consensus 209 d~~~H~s~~~g~~l--s~~~~g~~v~~~~----------~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~ 273 (334)
..+.|......+.. .....+..++.++ ..|+++|++++++..+++++|++++++||+|.+.| +++
T Consensus 151 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 230 (444)
T 3if2_A 151 LTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAH 230 (444)
T ss_dssp SSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHH
Confidence 35555544332110 0011256666655 24899999875432347899999999999999999 888
Q ss_pred HHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc---cEEeeC
Q 019931 274 LVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG---GFIACR 334 (334)
Q Consensus 274 L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G---G~i~~~ 334 (334)
|+++|++||++||+||+|+.++-+....+.. ....+.+|+++||||. ++.| ||++++
T Consensus 231 i~~~a~~~~~~li~De~~~~~~~~~~~~~~~---~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~ 290 (444)
T 3if2_A 231 LAEIAKRYDIPLIIDNAYGMPFPNIIYSDAH---LNWDNNTILCFSLSKI-GLPGMRTGIIVAD 290 (444)
T ss_dssp HHHHHHHTTCCEEEECTTCTTTTCCBCSCCC---CCCCTTEEEEEESTTT-TCGGGCCEEEECC
T ss_pred HHHHHHHCCCEEEEECCCCCccccccccccc---ccCCCCEEEEechhhc-cCCCCceEEEEEC
Confidence 9999999999999999998542211111111 1124567999999997 5444 888753
No 213
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.69 E-value=1.8e-15 Score=151.35 Aligned_cols=176 Identities=19% Similarity=0.140 Sum_probs=125.9
Q ss_pred chHHHHHHHHHHHhHhCCC--cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCe------EEEEcCCCchhhHHH
Q 019931 148 YTNYHRLLESCLADLKKKE--DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKI------AIFSDALNHASIIDG 219 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e--~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd------~Vl~d~~~H~s~~~g 219 (334)
...+..++.+.+++++|.+ .++++++|++||..++.++.... ++ . ...+|+ .|++....|.++...
T Consensus 146 ~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~--~~-~---~~~~G~~~~~~~~vl~s~~~h~s~~~~ 219 (515)
T 2jis_A 146 FVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQR--YP-D---CKQRGLRTLPPLALFTSKECHYSIQKG 219 (515)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHH--CT-T---HHHHCGGGSCCEEEEEETTSCTHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHH--hh-H---HhhcCccccCCeEEEECCCccHHHHHH
Confidence 3455566777899999975 57788999999999998764210 00 0 000132 788888899999888
Q ss_pred HHHhhhcCCc-EEEEeeCC-----CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC
Q 019931 220 IRIAERTKMV-EVFVYKHC-----DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA 290 (334)
Q Consensus 220 ~~ls~~~~g~-~v~~~~~~-----D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA 290 (334)
++.... +. +++.++.+ |+++|++++++. ..++++|+++.++|++|.+.|+++|.++|++||++|++|+|
T Consensus 220 ~~~~g~--g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a 297 (515)
T 2jis_A 220 AAFLGL--GTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAA 297 (515)
T ss_dssp HHHTTS--CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEET
T ss_pred HHHcCC--CCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehh
Confidence 877621 22 67777754 899999999752 12478999999999999999999999999999999999999
Q ss_pred cccccccCCCcccccccCCCCCccEEEecCccccc-CCc-cEEee
Q 019931 291 HGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAG-CQG-GFIAC 333 (334)
Q Consensus 291 h~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~G-G~i~~ 333 (334)
|+.+.+....... ...++ .++|+++.+++|.++ +.| |++++
T Consensus 298 ~~~~~~~~~~~~~-~~~g~-~~aD~v~~s~hK~l~~p~g~G~l~~ 340 (515)
T 2jis_A 298 WGGSVLLSQTHRH-LLDGI-QRADSVAWNPHKLLAAGLQCSALLL 340 (515)
T ss_dssp TGGGGGGCTTTGG-GGTTG-GGCSEEEECTTSTTCCCSCCEEEEE
T ss_pred hhhHHHhChhhHh-hcCCC-ccCCEEEECcccccCCCCCeeEEEE
Confidence 9987653111000 01122 257999999999997 444 66654
No 214
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.68 E-value=7.1e-16 Score=161.53 Aligned_cols=167 Identities=14% Similarity=0.055 Sum_probs=124.1
Q ss_pred chHHHHHHHHHHHhHhCCCcEEEeccH-HHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 148 YTNYHRLLESCLADLKKKEDCLLCPTG-FAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 148 ~~~~~~~LE~~La~~~g~e~alv~~sG-~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
....+.++++.+++++|.+.++++++| ++||..++.+++++ ||.|++++++|.++..++.++
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~--------------GD~Vlv~~~~h~s~~~~~~~~--- 265 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTD--------------NDVVVVDRNCHKSIEQGLMLT--- 265 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCT--------------TCEEEEESSCCHHHHHHHHHH---
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCC--------------CCEEEECCCchHHHHHHHHHc---
Confidence 345678999999999999988877777 57899999998765 899999999999999998887
Q ss_pred CCcEEEEeeCC---------------CHHHHHHHHhcCCC-------CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCE
Q 019931 227 KMVEVFVYKHC---------------DMSHLKTLLSCCTM-------RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFL 284 (334)
Q Consensus 227 ~g~~v~~~~~~---------------D~~~Le~~l~~~~~-------~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~ 284 (334)
|++++.++.. |+++|++++++.+. ++++|+++++ |++|.+.|+++|.++|++||++
T Consensus 266 -G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~ 343 (755)
T 2vyc_A 266 -GAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDR 343 (755)
T ss_dssp -CCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSE
T ss_pred -CCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCE
Confidence 8888776531 89999999975321 1236665565 6899999999999999999999
Q ss_pred EEEecCccccc-ccCCCcccccccC----CCCCccEEEecCcccccCC--ccEEee
Q 019931 285 LVLDDAHGTFV-CGKNGGGVAEQFN----CERDVDICVGTLSKAAGCQ--GGFIAC 333 (334)
Q Consensus 285 LivDeAh~~Gv-~G~~G~g~~~~~~----~~~~~Div~~SlsKa~G~~--GG~i~~ 333 (334)
|++|+||+.++ +++..++.....+ ......|++.|+||++++. ||++.+
T Consensus 344 livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~ 399 (755)
T 2vyc_A 344 LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHV 399 (755)
T ss_dssp EEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEE
T ss_pred EEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeee
Confidence 99999998653 2321111111011 1111234999999999763 577654
No 215
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.68 E-value=1.6e-15 Score=150.69 Aligned_cols=203 Identities=9% Similarity=-0.056 Sum_probs=136.6
Q ss_pred EeecCccCCCCCC----HHHHH-HHH-HhcCCCCccccccCchHHHHHHHHHH----HhHhCCC-----------cEEEe
Q 019931 113 LFSGNDYLGLSSH----PTIAK-AAA-RHGMGPRGSALICGYTNYHRLLESCL----ADLKKKE-----------DCLLC 171 (334)
Q Consensus 113 ~f~sn~yLgl~~~----p~v~~-a~~-~~g~g~~~sr~~~G~~~~~~~LE~~L----a~~~g~e-----------~alv~ 171 (334)
.+.+..|+|+-.. |.+.. ++. .++.+.. .....+...+||+++ ++++|.+ ..+++
T Consensus 70 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~----~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t 145 (475)
T 3k40_A 70 HWHSPKFHAYFPTANSYPAIVADMLSGAIACIGF----TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQ 145 (475)
T ss_dssp CTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSS----SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEE
T ss_pred CCCCcCceeeCCCCCcHHHHHHHHHHHHhCcccc----CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEc
Confidence 4566677776532 22322 222 2333221 222346666777665 5667765 46888
Q ss_pred ccHHHHHHHHHHHHhhhhh-hcc-CCCc---cCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC----CHHHH
Q 019931 172 PTGFAANMAVIVAVGNIAS-LLA-GDEK---SFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC----DMSHL 242 (334)
Q Consensus 172 ~sG~~An~~ai~al~~~~~-~~~-~~~~---~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~----D~~~L 242 (334)
++|++||+.++.+...... -+. .+.. ....++++|+++...|.++..++++. |++++.++++ |+++|
T Consensus 146 ~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~----g~~~~~v~~d~~~~d~~~L 221 (475)
T 3k40_A 146 GTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLG----GVKLRSVQSENHRMRGAAL 221 (475)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHH----TCEEEEECCBTTBCCHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHc----CCceEEEECCCCCcCHHHH
Confidence 9999999999987643200 000 0000 00012578999999999999999887 8899998874 99999
Q ss_pred HHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc-cCCCcccccccCCCCCccEEEe
Q 019931 243 KTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC-GKNGGGVAEQFNCERDVDICVG 318 (334)
Q Consensus 243 e~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~ 318 (334)
+++|++.. ..+++|++....+++|.+.|+++|.++|++||+++++|+||+.+++ .+...+.. .++ ..+|.++.
T Consensus 222 ~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~--~gi-~~~Ds~~~ 298 (475)
T 3k40_A 222 EKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLM--KGI-ESADSFNF 298 (475)
T ss_dssp HHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGG--TTG-GGCSEEEE
T ss_pred HHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHh--cCc-ccCCEEEE
Confidence 99997631 1256777778888899999999999999999999999999997643 22222221 122 24699999
Q ss_pred cCcccccC
Q 019931 319 TLSKAAGC 326 (334)
Q Consensus 319 SlsKa~G~ 326 (334)
+++|.++.
T Consensus 299 ~~hK~l~~ 306 (475)
T 3k40_A 299 NPHKWMLV 306 (475)
T ss_dssp CHHHHSSC
T ss_pred CchhccCC
Confidence 99998865
No 216
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.67 E-value=5.5e-17 Score=153.17 Aligned_cols=187 Identities=10% Similarity=0.076 Sum_probs=128.9
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhcC-----CCCcccc---ccCchHHHHHHHHHHHhHhCCC---cEEEeccH-HH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHGM-----GPRGSAL---ICGYTNYHRLLESCLADLKKKE---DCLLCPTG-FA 176 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g~-----g~~~sr~---~~G~~~~~~~LE~~La~~~g~e---~alv~~sG-~~ 176 (334)
|+.++|..+.+ ..+|.|++++.++-. |.+.+.. ..+..+.++++++++++++|.+ .+++++++ ++
T Consensus 2 ~~~~~~~~g~~---~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~ 78 (360)
T 1w23_A 2 KQVFNFNAGPS---ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASL 78 (360)
T ss_dssp CCCEECCSSSC---CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred CceEeecCCCc---CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchH
Confidence 44566666543 568999998876532 1111111 3344557889999999999975 45566666 89
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC------CCHHHHHH-HHhcC
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH------CDMSHLKT-LLSCC 249 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~------~D~~~Le~-~l~~~ 249 (334)
|+..++.++..++ +++|.|+.+...|.+.. .++.. | +++.++. .|+++|++ +++
T Consensus 79 al~~~~~~l~~~~-----------~~g~~vi~~~~~~~~~~-~~~~~----g-~~~~v~~~~~~~~~d~~~l~~~~i~-- 139 (360)
T 1w23_A 79 QFTMLPMNLLTKG-----------TIGNYVLTGSWSEKALK-EAKLL----G-ETHIAASTKANSYQSIPDFSEFQLN-- 139 (360)
T ss_dssp HHHHHHHHHCCTT-----------CEEEEEECSHHHHHHHH-HHHTT----S-EEEEEEECGGGTSCSCCCGGGCCCC--
T ss_pred HHHHHHHHhcCCC-----------CcccEEEecchhHHHHH-HHHHh----C-CeEEeecccccCcCCccchHhhccC--
Confidence 9999998887541 23788888877776532 22222 6 7777653 36777777 653
Q ss_pred CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-
Q 019931 250 TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG- 328 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G- 328 (334)
+++++|++++++|++|.+.| +|+++||++||+|++|+.+... .++. ..|++++|+||+||+.|
T Consensus 140 -~~~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~---------~~~~-~~di~~~s~sK~~~~~G~ 203 (360)
T 1w23_A 140 -ENDAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRP---------LKVN-QFGMIYAGAQKNLGPSGV 203 (360)
T ss_dssp -TTEEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSC---------CCGG-GCSEEEEETTTTTSCTTC
T ss_pred -CCCCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCC---------cCcc-cCCEEEEEcccccCCCCc
Confidence 37899999999999999877 3344899999999999875321 1111 12799999999999877
Q ss_pred cEEee
Q 019931 329 GFIAC 333 (334)
Q Consensus 329 G~i~~ 333 (334)
|++++
T Consensus 204 G~~~~ 208 (360)
T 1w23_A 204 TVVIV 208 (360)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88765
No 217
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.67 E-value=2.3e-16 Score=153.46 Aligned_cols=208 Identities=13% Similarity=-0.012 Sum_probs=133.4
Q ss_pred EEEeecCccCC---CCCCHHHHHHHHHhc---CC--CCccccccCchHHHHHHHHHHHhHhCCC--cEEEeccHHHHH--
Q 019931 111 LLLFSGNDYLG---LSSHPTIAKAAARHG---MG--PRGSALICGYTNYHRLLESCLADLKKKE--DCLLCPTGFAAN-- 178 (334)
Q Consensus 111 ~l~f~sn~yLg---l~~~p~v~~a~~~~g---~g--~~~sr~~~G~~~~~~~LE~~La~~~g~e--~alv~~sG~~An-- 178 (334)
.+||+.++. . +..+|.+++++.+.- .+ ...+....| ..+|+++++++++.+ ++++++++++++
T Consensus 34 ~i~l~~g~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G----~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l 108 (422)
T 3d6k_A 34 SLDLTRGKP-SAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLG----IADIRELWAEALGLPADLVVAQDGSSLNIMF 108 (422)
T ss_dssp CEECCCCSC-CHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSC----CHHHHHHHHHHHTCCGGGEEECSSCHHHHHH
T ss_pred eEeCCCCCC-ChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCC----CHHHHHHHHHHhCCChhHEEEecchHHHHHH
Confidence 689998875 3 445667777654321 11 112222222 477899999998864 566667777776
Q ss_pred HHHHHHHhhhhhhccCCCccCCC-CCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC----CCHHHHHHHHhcCCCCc
Q 019931 179 MAVIVAVGNIASLLAGDEKSFKD-EKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH----CDMSHLKTLLSCCTMRK 253 (334)
Q Consensus 179 ~~ai~al~~~~~~~~~~~~~~~~-~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~----~D~~~Le~~l~~~~~~~ 253 (334)
..++.++..+. ..+..+..+ .+|.|++..+.|......++.. |++++.++. .|+++|++++++ .++
T Consensus 109 ~~~~~~l~~~~---~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~----g~~~~~v~~~~~g~d~~~l~~~l~~--~~~ 179 (422)
T 3d6k_A 109 DLISWSYTWGN---NDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF----GFEMINVPMTDEGPDMGVVRELVKD--PQV 179 (422)
T ss_dssp HHHHHHHHHCC---TTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH----TCEEEEEEEETTEECHHHHHHHHTS--TTE
T ss_pred HHHHHHhcCcc---cccccccccCCCCEEEEeCCccHHHHHHHHHc----CCEEEecCCCCCCCCHHHHHHHHhc--CCC
Confidence 45556554320 000000000 1346777777888887777766 788888775 389999998864 257
Q ss_pred EEEE-EcCCCCCCCCccCHH---HHHHHHH-HcCCEEEEecCcccccccCCCcccccc------cCCCCCccEEEecCcc
Q 019931 254 KVVV-TDSLFSMDGDFAPMV---ELVKLRR-KYGFLLVLDDAHGTFVCGKNGGGVAEQ------FNCERDVDICVGTLSK 322 (334)
Q Consensus 254 ~lVv-~e~v~n~~G~~~pL~---~L~ela~-k~ga~LivDeAh~~Gv~G~~G~g~~~~------~~~~~~~Div~~SlsK 322 (334)
++|+ +.+++||+|.+.|.+ +|+++|+ +||+++|+||+|+.+-++..+...... .+ ..+.+|+++||||
T Consensus 180 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK 258 (422)
T 3d6k_A 180 KGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAG-NPNRFWFMSSTSK 258 (422)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTT-CTTCEEEEEESTT
T ss_pred eEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccC-CCCcEEEEcChhh
Confidence 8777 789999999999866 7777777 999999999999853343333221111 11 2345799999999
Q ss_pred cccCCc---cEEeeC
Q 019931 323 AAGCQG---GFIACR 334 (334)
Q Consensus 323 a~G~~G---G~i~~~ 334 (334)
+ ++.| ||++++
T Consensus 259 ~-~~~GlriG~~~~~ 272 (422)
T 3d6k_A 259 I-THAGSGVSFFASS 272 (422)
T ss_dssp T-SCTTSSCEEEECC
T ss_pred h-cCcccceEEEEeC
Confidence 8 4444 888764
No 218
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.66 E-value=4.8e-15 Score=147.75 Aligned_cols=172 Identities=16% Similarity=0.133 Sum_probs=122.0
Q ss_pred HHHHHHHHHhHhCCC----cEEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCC-----e-EEEEcCCCchhhHHHHH
Q 019931 152 HRLLESCLADLKKKE----DCLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEK-----I-AIFSDALNHASIIDGIR 221 (334)
Q Consensus 152 ~~~LE~~La~~~g~e----~alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~g-----d-~Vl~d~~~H~s~~~g~~ 221 (334)
..++.+.+++++|.+ .++++++|++||..++.++.... ++ . ...+| + +|++....|.++...++
T Consensus 134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~--~~-~---~~~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKY--FP-E---VKTKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHH--CT-T---HHHHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHH--hh-H---HhhcCccccCCeEEEECCcchHHHHHHHH
Confidence 344445668888865 46788999999999998875310 00 0 00012 4 78888889999988887
Q ss_pred HhhhcCCc-EEEEeeCC-----CHHHHHHHHhcC---CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 222 IAERTKMV-EVFVYKHC-----DMSHLKTLLSCC---TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 222 ls~~~~g~-~v~~~~~~-----D~~~Le~~l~~~---~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.... +. +++.++.+ |+++|++++++. ..++++|++..++|++|.+.|+++|.++|++||+|+++|+||+
T Consensus 208 ~~g~--g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~ 285 (504)
T 2okj_A 208 ALGF--GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG 285 (504)
T ss_dssp HTTS--CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred HcCC--CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence 7621 22 67777764 899999999752 1247899999999999999999999999999999999999999
Q ss_pred cccccCCCcccccccCCCCCccEEEecCcccccC-C-ccEEee
Q 019931 293 TFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGC-Q-GGFIAC 333 (334)
Q Consensus 293 ~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~-GG~i~~ 333 (334)
.+.+...... ....++ .++|+++.+++|.++. . .|++++
T Consensus 286 ~~~~~~~~~~-~~~~g~-~~~D~i~~~~hK~~~~p~~~g~l~~ 326 (504)
T 2okj_A 286 GGLLMSRKHR-HKLNGI-ERANSVTWNPHKMMGVLLQCSAILV 326 (504)
T ss_dssp GGGGGCTTTG-GGGTTG-GGCSEEEECTTSTTCCCSCCEEEEE
T ss_pred hHHHhCHhhH-hhcCCc-ccCCEEEECchhhcCCCcceEEEEE
Confidence 8765311100 011122 2578999999999974 3 266554
No 219
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.66 E-value=4e-15 Score=147.47 Aligned_cols=170 Identities=12% Similarity=0.017 Sum_probs=120.6
Q ss_pred HHHHHHHhHhCCCc-----------EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCC--------CCeEEEEcCCCch
Q 019931 154 LLESCLADLKKKED-----------CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKD--------EKIAIFSDALNHA 214 (334)
Q Consensus 154 ~LE~~La~~~g~e~-----------alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~--------~gd~Vl~d~~~H~ 214 (334)
++.+.+++++|.+. .+++++|++||..++.++..+. ++. .++..+ ++.+|++....|.
T Consensus 117 ~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~--~~~-~~~~~gd~~~~~~~~~~~v~~s~~~h~ 193 (486)
T 1js3_A 117 VMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKV--VRR-LQAASPGLTQGAVLEKLVAYASDQAHS 193 (486)
T ss_dssp HHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHH--HHH-HHHHSTTCCHHHHHHHEEEEEETTCCH
T ss_pred HHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHH--hhh-hhccCccchhcccCCCEEEEECCCCcH
Confidence 44445567778653 6888999999999998764320 000 000000 0235788889999
Q ss_pred hhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCC---CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 215 SIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCT---MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 215 s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~---~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
++...++.. |.+++.++.+ |+++|++++++.. ..+.+|++..++|++|.+.|+++|.++|++||++|+
T Consensus 194 s~~~~~~~~----G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 194 SVERAGLIG----GVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHHHHHHHH----TCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhC----CCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 999988887 8888888763 8999999997531 012478888889999999999999999999999999
Q ss_pred EecCcccccc-cCCCcccccccCCCCCccEEEecCcccccC-Cc-cEEee
Q 019931 287 LDDAHGTFVC-GKNGGGVAEQFNCERDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 287 vDeAh~~Gv~-G~~G~g~~~~~~~~~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
+|+||+.+.+ .+..+... .++ .++|+++.+++|.+++ .| |++++
T Consensus 270 vD~a~g~~~~~~~~~~~~~--~g~-~~adsi~~~~hK~~~~p~~~G~l~~ 316 (486)
T 1js3_A 270 VDAAYAGSAFICPEFRHLL--NGV-EFADSFNFNPHKWLLVNFDCSAMWV 316 (486)
T ss_dssp EECTTGGGGGGSTTTGGGG--TTG-GGCSEEEECHHHHSSCCSSCEEEEE
T ss_pred EehhhHHHHHHCHHHHHHh--cCc-cccCeeEEchhhhcCCCcceEEEEE
Confidence 9999997754 22222221 232 3578999999999975 33 66654
No 220
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.64 E-value=1.1e-14 Score=141.94 Aligned_cols=204 Identities=10% Similarity=0.048 Sum_probs=138.2
Q ss_pred eeEEEeecCccCC----CCCCHHHHHHHHHh---cCCCCccccccCchHHHHHHHHHHHhHhCC----Cc--EEEeccHH
Q 019931 109 KRLLLFSGNDYLG----LSSHPTIAKAAARH---GMGPRGSALICGYTNYHRLLESCLADLKKK----ED--CLLCPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLg----l~~~p~v~~a~~~~---g~g~~~sr~~~G~~~~~~~LE~~La~~~g~----e~--alv~~sG~ 175 (334)
...|||+-..|.. +...+.|++|.+ . ..+..+|....|..++.+.+.+.+....+. +. ++++++|+
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~ 107 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGT 107 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHH
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchH
Confidence 4578998776543 335677888755 3 123344555667755555555554333221 23 46778888
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~ 248 (334)
.|+..++.++..- .+ |.|++..+.+......++.. |++++.++. .|+++|++.+++
T Consensus 108 ~al~~~~~~l~~~------------~~-d~Vlv~~P~y~~~~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 170 (405)
T 3k7y_A 108 GAIFVLLEFLKML------------NV-ETLYVTNPPYINHVNMIESR----GFNLKYINFFDYNLIDINYDLFLNDLRN 170 (405)
T ss_dssp HHHHHHHHHHHTT------------TC-CEEEEESSCCHHHHHHHHTT----TCEEEEECCEETTTTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc------------CC-CEEEEeCCCCHhHHHHHHHc----CCeEEEEeccccccCCcCHHHHHHHHHh
Confidence 9999988877642 14 77888888888888777777 888888764 178999999875
Q ss_pred CCCCcEEEEEcCC-CCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCc---ccccccCCCCCccEEEecCc
Q 019931 249 CTMRKKVVVTDSL-FSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGG---GVAEQFNCERDVDICVGTLS 321 (334)
Q Consensus 249 ~~~~~~lVv~e~v-~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~---g~~~~~~~~~~~Div~~Sls 321 (334)
.+ ++++|++.++ +||+|.+.+ +++|+++|++|++++|+||+|....++.... .......... .-|++.|||
T Consensus 171 ~~-~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~-~~i~~~S~S 248 (405)
T 3k7y_A 171 IP-NGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI-AFSVCQSFS 248 (405)
T ss_dssp SC-SSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC-CEEEEEECT
T ss_pred CC-CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC-cEEEEeeCC
Confidence 32 4677777665 799999887 6678899999999999999998654431101 1111111112 348899999
Q ss_pred ccccCCc---cEEe
Q 019931 322 KAAGCQG---GFIA 332 (334)
Q Consensus 322 Ka~G~~G---G~i~ 332 (334)
|+||+.| ||++
T Consensus 249 K~~~l~GlRiG~~~ 262 (405)
T 3k7y_A 249 KNMSLYGERAGALH 262 (405)
T ss_dssp TTSCCTTTTEEEEE
T ss_pred ccCCCccccceEEE
Confidence 9999877 8864
No 221
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.64 E-value=1.8e-15 Score=149.17 Aligned_cols=166 Identities=11% Similarity=0.073 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHhHhCCCc-EEEeccHH-HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhc
Q 019931 149 TNYHRLLESCLADLKKKED-CLLCPTGF-AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERT 226 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~-alv~~sG~-~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~ 226 (334)
....+++++.+++++|.+. ++++++|+ ++|..++.++.... +++.|++....|.++...++..
T Consensus 132 ~~~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~------------~~~~vi~~~~~h~s~~~~~~~~--- 196 (456)
T 2z67_A 132 YALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKY------------GSNVVIYPYASHKSPIKAVSFV--- 196 (456)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHH------------CCCEEEEECCCCHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhc------------CCCEEEEECCCcHHHHHHHHHc---
Confidence 4566889999999999865 67778888 67877777654310 2566666666999988888776
Q ss_pred CCcEEEEeeC--------CCHHHHHHHH-hcC-CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 227 KMVEVFVYKH--------CDMSHLKTLL-SCC-TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 227 ~g~~v~~~~~--------~D~~~Le~~l-~~~-~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
|.+++.++. .|+++|++++ +.. ..++++|++..++|++|.+.|+++|.++|+++|+++++|+||+...+
T Consensus 197 -G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~ 275 (456)
T 2z67_A 197 -GMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN 275 (456)
T ss_dssp -TCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH
T ss_pred -CCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHH
Confidence 788777653 3899999999 421 12677888889999999999999999999999999999999986544
Q ss_pred cCCCcccccccCCCCCccEEEecCccccc-CC-ccEEee
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAG-CQ-GGFIAC 333 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~-GG~i~~ 333 (334)
|..... .... ..++|+++.|++|.++ +. +|++++
T Consensus 276 g~~~~~-~~~~--~~~~D~~~~s~hK~~~~p~g~G~l~~ 311 (456)
T 2z67_A 276 YYLEKL-KKAF--KYRVDAVVSSSDKNLLTPIGGGLVYS 311 (456)
T ss_dssp HHHHHH-HHHH--TSCCSEEEEEHHHHHCCCSSCEEEEE
T ss_pred HhhHHH-HHhh--CCCCCEEEEcCCCCcCCCCCeEEEEE
Confidence 210000 0011 1157899999999864 44 377765
No 222
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.63 E-value=1e-15 Score=147.42 Aligned_cols=207 Identities=14% Similarity=0.081 Sum_probs=121.1
Q ss_pred eeEEEeecCccCCCCC--CHHHHHHHHHhc-CCC-CccccccCchHHHHHHHHHHHhHh----C----CCcEEEeccHHH
Q 019931 109 KRLLLFSGNDYLGLSS--HPTIAKAAARHG-MGP-RGSALICGYTNYHRLLESCLADLK----K----KEDCLLCPTGFA 176 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~--~p~v~~a~~~~g-~g~-~~sr~~~G~~~~~~~LE~~La~~~----g----~e~alv~~sG~~ 176 (334)
..++||+.++. .... .+.+++++++.. .+. ..+.+.++......+|++++++++ | .++++++++|++
T Consensus 31 ~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~ 109 (417)
T 3g7q_A 31 PGAIMLGGGNP-AHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQS 109 (417)
T ss_dssp -CCEECSCCCC-CCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred CCceEecCcCC-CCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHH
Confidence 56789888753 2211 133444544431 110 000011222222356777777765 2 357899999999
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEc-CCCchhhHHHHHHh--hhcCCcEEEEeeC------CCHHHHHHHHh
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSD-ALNHASIIDGIRIA--ERTKMVEVFVYKH------CDMSHLKTLLS 247 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d-~~~H~s~~~g~~ls--~~~~g~~v~~~~~------~D~~~Le~~l~ 247 (334)
|+..++.+++.+++ .+..+.|++. .+.|......+... ....+..+..++. .|+++|+ +.
T Consensus 110 al~~~~~~l~~~gd---------~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~ 178 (417)
T 3g7q_A 110 AFFYLFNLFAGRRA---------DGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IG 178 (417)
T ss_dssp HHHHHHHHHSBC-------------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CC
T ss_pred HHHHHHHHHcCCCc---------cCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cc
Confidence 99999999876510 0001156553 55555544333211 0111334444432 2788877 33
Q ss_pred cCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccc
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAA 324 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~ 324 (334)
+++++|++++++||+|.+.| +++|+++|++||+++|+||+|+...-+....+. .....+.+|+++|||| +
T Consensus 179 ---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~---~~~~~~~~i~~~s~sK-~ 251 (417)
T 3g7q_A 179 ---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEA---RPLWNPNIILCMSLSK-L 251 (417)
T ss_dssp ---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCC---CCCCCTTEEEEEESGG-G
T ss_pred ---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccc---ccCCCCCEEEEEechh-c
Confidence 37899999999999999988 888999999999999999999853211111111 1112355799999999 6
Q ss_pred cCCc---cEEeeC
Q 019931 325 GCQG---GFIACR 334 (334)
Q Consensus 325 G~~G---G~i~~~ 334 (334)
++.| ||++++
T Consensus 252 ~~~G~r~G~~~~~ 264 (417)
T 3g7q_A 252 GLPGSRCGIIIAN 264 (417)
T ss_dssp TCTTSCCEEEECC
T ss_pred cCCCcceEEEEeC
Confidence 6655 888763
No 223
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.62 E-value=1.3e-15 Score=150.12 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=112.0
Q ss_pred hHHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcC
Q 019931 149 TNYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTK 227 (334)
Q Consensus 149 ~~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~ 227 (334)
.....++++.+++ +|.++.+++ ++|++||..++.+++++ ||.|++++..|.++..++.+.
T Consensus 56 ~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~--------------gd~Vlv~~~~h~s~~~~~~~~---- 116 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQK--------------KGDILMARNVHKSVLHALDIS---- 116 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTS--------------SSCEEECTTCCHHHHHHHHHH----
T ss_pred chHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCC--------------CCEEEEecCccHHHHHHHHHc----
Confidence 3456899999999 998766555 55578999999987654 788999999999999998887
Q ss_pred CcEEEEeeC--C---------CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 228 MVEVFVYKH--C---------DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 228 g~~v~~~~~--~---------D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
|++++.++. + |+++| +. +++++|++++ .|++|.+.|+++|+++|++||++||+||||+. .+
T Consensus 117 G~~~~~v~~~~~~~~~~~~~~d~~~l---~~---~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~ 188 (446)
T 2x3l_A 117 QQEGHFIETHQSPLTNHYNKVNLSRL---NN---DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HF 188 (446)
T ss_dssp TCCEEECEEEECTTTSSEEEEEC-------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TT
T ss_pred CCeEEEEeCeeccccCcCCCCCHHHH---cC---CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hh
Confidence 777777665 3 33444 22 3678877777 55699999999999999999999999999986 23
Q ss_pred cCCCcccccccCCCCCccEEEecCccccc-CC-ccEEee
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAG-CQ-GGFIAC 333 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G-~~-GG~i~~ 333 (334)
...+. ..... ..++|+++.|+||+++ .. +|++.+
T Consensus 189 ~f~~~-~~~~~--~~g~Di~~~S~~K~l~~~~g~g~l~~ 224 (446)
T 2x3l_A 189 GLQGF-PDSTL--NYQADYVVQSFHKTLPALTMGSVLYI 224 (446)
T ss_dssp TSTTS-CCCGG--GGTCSEEEECHHHHSSSCTTCEEEEE
T ss_pred ccCCC-CCChH--HcCCCEEEECCccccccccccEEEEE
Confidence 22222 11111 1236899999999764 33 377764
No 224
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.62 E-value=2.4e-15 Score=142.47 Aligned_cols=172 Identities=10% Similarity=0.027 Sum_probs=115.0
Q ss_pred CCCCHHHHHHHHHhcC---CCCcccc-----ccCchHHHHHHHHHHHhHhCCC---cEEEe-ccHHHHHHHHHHHHhhhh
Q 019931 122 LSSHPTIAKAAARHGM---GPRGSAL-----ICGYTNYHRLLESCLADLKKKE---DCLLC-PTGFAANMAVIVAVGNIA 189 (334)
Q Consensus 122 l~~~p~v~~a~~~~g~---g~~~sr~-----~~G~~~~~~~LE~~La~~~g~e---~alv~-~sG~~An~~ai~al~~~~ 189 (334)
...+|.|++++.++-. +.+++++ ..+....++++++++++++|.+ +++++ ++|++|+..++.+++++
T Consensus 13 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~- 91 (362)
T 2c0r_A 13 AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKE- 91 (362)
T ss_dssp CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCT-
T ss_pred CCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCC-
Confidence 3468999998876432 2222211 1223456789999999999976 45555 78899999999988764
Q ss_pred hhccCCCccCCCCCeEEEEcCCCchhh--HHHHHHhhhcCCcEEEEeeC------C---CHHHHHHHHhcCCCCcEEEEE
Q 019931 190 SLLAGDEKSFKDEKIAIFSDALNHASI--IDGIRIAERTKMVEVFVYKH------C---DMSHLKTLLSCCTMRKKVVVT 258 (334)
Q Consensus 190 ~~~~~~~~~~~~~gd~Vl~d~~~H~s~--~~g~~ls~~~~g~~v~~~~~------~---D~~~Le~~l~~~~~~~~lVv~ 258 (334)
||.|++....|.+. ...++.. | +++.++. . |.++++ + .+++++|++
T Consensus 92 -------------gd~vl~~~~~~~~~~~~~~~~~~----g-~~~~v~~~~~~~~~~~~~~~~~~--i---~~~t~~v~~ 148 (362)
T 2c0r_A 92 -------------GQTANYVMTGSWASKALKEAKLI----G-DTHVAASSEASNYMTLPKLQEIQ--L---QDNAAYLHL 148 (362)
T ss_dssp -------------TCEEEEEECSHHHHHHHHHHHHH----S-CEEEEEECGGGTTCSCCCGGGCC--C---CTTEEEEEE
T ss_pred -------------CCeEEEEecCcHhHHHHHHHHHh----C-CeEEEecccccccccCCCHHHcc--c---CCCcCEEEE
Confidence 66665443333332 2333333 5 5555542 2 333332 3 347899999
Q ss_pred cCCCCCCCCc-cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEee
Q 019931 259 DSLFSMDGDF-APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIAC 333 (334)
Q Consensus 259 e~v~n~~G~~-~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~~ 333 (334)
.++.|++|.+ .|+++| +|+++++|++|+.|.. ..++. +.|+++.|+||.+|+.| ||+++
T Consensus 149 ~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~---------~~~~~-~~d~~~~s~~K~~g~~G~G~l~~ 209 (362)
T 2c0r_A 149 TSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSR---------PFDLN-QFGLVYAGAQKNLGPSGVTVVIV 209 (362)
T ss_dssp ESEETTTTEECSSCCCC------TTSCEEEECTTTTTSS---------CCCGG-GCSEEEEETTTTTCCSSCEEEEE
T ss_pred eCCcCccceeccccccc------CCCEEEEEChhhccCC---------ccchh-HCcEEEEeccccccCcCcEEEEE
Confidence 9999999985 778776 8999999999987632 11222 23899999999999888 88875
No 225
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.61 E-value=1.1e-14 Score=139.55 Aligned_cols=157 Identities=14% Similarity=0.055 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHhHhCCCcEEEe-ccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCC
Q 019931 150 NYHRLLESCLADLKKKEDCLLC-PTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKM 228 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~alv~-~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g 228 (334)
+..+++++++++++|.+..++| +||++|+.+++..+ .+ ||.|++....|.+..........+.+
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~-~~--------------gd~vi~~~~~~~~~~~~~~~~~~g~~ 99 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQL-TI--------------DEDCLIIRNGWFSYRWTQILEKGKFA 99 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHH-CT--------------TCEEEEEECSHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhC-CC--------------CCeEEEEeCCchhHHHHHHHHHhCCC
Confidence 5678899999999998766655 79999999987543 33 56565544444443211111111112
Q ss_pred cEEEEee--------------CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCc
Q 019931 229 VEVFVYK--------------HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 229 ~~v~~~~--------------~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh 291 (334)
.+++.++ ..|+++|++++++. ++++|++.++.|++|.+.| +++|.++|++||++||+|++|
T Consensus 100 ~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~ 177 (379)
T 3ke3_A 100 KSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED--KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA 177 (379)
T ss_dssp SEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH--TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CceEEEeccccccccccCCCCCCCHHHHHHHHhhc--CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 3555443 36899999999642 5788888899999999999 999999999999999999999
Q ss_pred ccccccCCCcccccccCCC-CCccEEEecCcccccC-Cc-cEEee
Q 019931 292 GTFVCGKNGGGVAEQFNCE-RDVDICVGTLSKAAGC-QG-GFIAC 333 (334)
Q Consensus 292 ~~Gv~G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~-~G-G~i~~ 333 (334)
+ |.. .+ .+. .++|++++|++|++++ .| |++++
T Consensus 178 ~-g~~-----~~----~~~~~~~d~~~~s~~K~l~~~~g~g~~~~ 212 (379)
T 3ke3_A 178 S-GCV-----WL----DMKELGIDVLISAPQKGWSSTPCAGLVML 212 (379)
T ss_dssp C-TTC-----CC----CHHHHTCSEEEECTTTTTCSCCCEEEEEE
T ss_pred c-CCc-----cc----cccccCCCEEEecchhhcCCCCceEEEEE
Confidence 7 521 11 111 2578999999999965 34 67665
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.59 E-value=3.7e-15 Score=150.75 Aligned_cols=201 Identities=13% Similarity=0.073 Sum_probs=132.2
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcCCCCccccccCchHHHHHHHHHH-HhHhC-------CCcEEEeccHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGMGPRGSALICGYTNYHRLLESCL-ADLKK-------KEDCLLCPTGFAANMAVI 182 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~sr~~~G~~~~~~~LE~~L-a~~~g-------~e~alv~~sG~~An~~ai 182 (334)
.++|+.+++ ++ .+|.+++++.+...+ ..+....|..++.+++.+.+ .+..+ .+++++++++++|+..++
T Consensus 106 ~i~l~~g~~-~~-~~~~~~~al~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~ 182 (546)
T 2zy4_A 106 SLSYVRDQL-GL-DPAAFLHEMVDGILG-CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIF 182 (546)
T ss_dssp HHHHHHHTS-CC-CHHHHHHHHHHHHHT-CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHH
T ss_pred hhecccCCC-CC-CChHHHHHHHHhhhc-CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHH
Confidence 678877764 66 456666655432222 23444456656655544433 22221 135677778888988888
Q ss_pred HHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC-------CCHHHHHHHHhcCCCCcEE
Q 019931 183 VAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH-------CDMSHLKTLLSCCTMRKKV 255 (334)
Q Consensus 183 ~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~-------~D~~~Le~~l~~~~~~~~l 255 (334)
.++.... ..++||.|++..+.|..+...+.+.. .+.+++.++. .|+++|++++. +++++
T Consensus 183 ~~l~~~~---------l~~~Gd~Vlv~~P~y~~~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~ 248 (546)
T 2zy4_A 183 ESLKLNG---------LLKAGDKVAIGMPVFTPYIEIPELAQ--YALEEVAINADPSLNWQYPDSELDKLKD---PAIKI 248 (546)
T ss_dssp HHHHHTT---------SSCTTCEEEEEESCCHHHHHHHHSTT--SCCEEEEEECBGGGTTBCCHHHHGGGGS---TTEEE
T ss_pred HHhhhhh---------cCCCCCEEEEeCCCCccHHHHHHHcC--CCcEEEEEecCcccCCCCCHHHHHHhhC---CCCeE
Confidence 8752110 01237888888888888777655541 2577777764 36778877653 36888
Q ss_pred EEEcCCCCCCCCccC---HHHHHHHH--HHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--
Q 019931 256 VVTDSLFSMDGDFAP---MVELVKLR--RKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-- 328 (334)
Q Consensus 256 Vv~e~v~n~~G~~~p---L~~L~ela--~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-- 328 (334)
|++++++||+|.+.+ +++|+++| +++|++||+||+|+....+ ...+.. ..++.+|++.||||++|..|
T Consensus 249 v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--~~s~~~---~~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 249 FFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--FQSLFA---ICPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp EEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--CCCHHH---HCGGGEEEEEESTTTTTCGGGC
T ss_pred EEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--CcCHHH---hCCCCEEEEEeCccccCCCCcc
Confidence 888899999999887 56688888 7899999999999964332 222222 12345799999999999877
Q ss_pred -cEEee
Q 019931 329 -GFIAC 333 (334)
Q Consensus 329 -G~i~~ 333 (334)
||+++
T Consensus 324 iG~~~~ 329 (546)
T 2zy4_A 324 LGVVAA 329 (546)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 99876
No 227
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.55 E-value=2.6e-15 Score=145.03 Aligned_cols=188 Identities=13% Similarity=0.013 Sum_probs=122.0
Q ss_pred ceeEEEeecCccCCCCCCHHHHHHHHHhc-----CCCCccccccCc-hHHHHHHHHHHHhHhC-------C-CcEEEecc
Q 019931 108 FKRLLLFSGNDYLGLSSHPTIAKAAARHG-----MGPRGSALICGY-TNYHRLLESCLADLKK-------K-EDCLLCPT 173 (334)
Q Consensus 108 g~~~l~f~sn~yLgl~~~p~v~~a~~~~g-----~g~~~sr~~~G~-~~~~~~LE~~La~~~g-------~-e~alv~~s 173 (334)
++.++||+..+. .+..++.+++++.+.. .+...+....|. ...+.+|++++|++++ . ++++++++
T Consensus 21 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~~~~~~~i~~t~G 99 (391)
T 3bwn_A 21 SDFVVNLDHGDP-TAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNAATEDRYIVVGTG 99 (391)
T ss_dssp TTSCEECSSCCC-GGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSBCCSSSEEEEEEH
T ss_pred CCCeeEcCCCCC-CCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCCCCCCCeEEEeCC
Confidence 366788877652 3333344444442211 122233334443 2223678888888876 3 35677777
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCccCCCCCe----EEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcC
Q 019931 174 GFAANMAVIVAVGNIASLLAGDEKSFKDEKI----AIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCC 249 (334)
Q Consensus 174 G~~An~~ai~al~~~~~~~~~~~~~~~~~gd----~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~ 249 (334)
+++|+..++.+++.+ || .|++..+.|..+...++.. |++++.++.+ .+.++ .
T Consensus 100 ~~~al~~~~~~l~~~--------------Gd~~~~~Vlv~~P~y~~~~~~~~~~----g~~~~~~~~d-~~~l~----~- 155 (391)
T 3bwn_A 100 STQLCQAAVHALSSL--------------ARSQPVSVVAAAPFYSTYVEETTYV----RSGMYKWEGD-AWGFD----K- 155 (391)
T ss_dssp HHHHHHHHHHHHHHT--------------SSSSSEEEEECSSCCTHHHHHHHTT----CBTTEEEEEE-STTCC----C-
T ss_pred hHHHHHHHHHHhcCC--------------CCCCcceEEEcCCCchhHHHHHHHc----CCeEEEecCC-HHHcC----C-
Confidence 889999999998875 67 8999999999888877766 6766666642 23332 1
Q ss_pred CCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcC--CEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 250 TMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYG--FLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 250 ~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~g--a~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
+++++|++.+++||+|.+.+ +|++ ++++ +++|+||+|..+ . ...+ ....+.+|+++||||+||+.
T Consensus 156 -~~~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~~ii~De~y~~~---~-~~~l----~~~~~~~i~~~S~SK~~g~~ 222 (391)
T 3bwn_A 156 -KGPYIELVTSPNNPDGTIRE--TVVN--RPDDDEAKVIHDFAYYWP---H-YTPI----TRRQDHDIMLFTFSKITGHA 222 (391)
T ss_dssp -CSCEEEEEESSCTTTCCCCC--CCC-------CCCEEEEECTTCST---T-TSCC----CCCBCCSEEEEEHHHHHSCG
T ss_pred -CCCEEEEECCCCCCCchhHH--HHHH--HhhcCCCEEEEeCCCCCC---C-CCcc----ccCCCCeEEEEechhhcCCC
Confidence 36889989999999999876 4544 2255 999999999731 1 1111 11234579999999999988
Q ss_pred c---cEEee
Q 019931 328 G---GFIAC 333 (334)
Q Consensus 328 G---G~i~~ 333 (334)
| ||+++
T Consensus 223 GlRiG~~~~ 231 (391)
T 3bwn_A 223 GSRIGWALV 231 (391)
T ss_dssp GGCEEEEEE
T ss_pred ccceEEEEe
Confidence 8 99875
No 228
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.52 E-value=1.1e-13 Score=135.38 Aligned_cols=160 Identities=15% Similarity=0.132 Sum_probs=112.4
Q ss_pred cccCchHHHHHHHHHHHhHhCCCcE--EEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHH
Q 019931 144 LICGYTNYHRLLESCLADLKKKEDC--LLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIR 221 (334)
Q Consensus 144 ~~~G~~~~~~~LE~~La~~~g~e~a--lv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ 221 (334)
...|..+...++++.+++++|.+.. ++++++++++.+++.++.-. ++|.|+++...|.++...++
T Consensus 102 ~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~-------------~gd~Viv~~~~h~s~~~~~~ 168 (438)
T 1wyu_A 102 VSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET-------------GRMGVLVSQGVHPEYRAVLR 168 (438)
T ss_dssp GCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH-------------TCCEEEEETTSCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcC-------------CCCEEEEcCccCHhHHHHHH
Confidence 4566678889999999999998754 56677775555555443211 37889999999999887775
Q ss_pred HhhhcCCcEEEEeeCC----CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecC-cccccc
Q 019931 222 IAERTKMVEVFVYKHC----DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDA-HGTFVC 296 (334)
Q Consensus 222 ls~~~~g~~v~~~~~~----D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeA-h~~Gv~ 296 (334)
......|++++.++.. |+++ +. +++++|+++++ |++|.+.|+++|.++|+++|+++++|.. ++.|.+
T Consensus 169 ~~a~~~G~~v~~v~~~~~~~d~~~----i~---~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~ 240 (438)
T 1wyu_A 169 AYLEAVGAKLLTLPLEGGRTPLPE----VG---EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL 240 (438)
T ss_dssp HHHHHTTCEEEEECCBTTBCCCCC----CC---TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB
T ss_pred HHHHHCCCEEEEEcCcCCccCHHH----hC---CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc
Confidence 4212238888888742 3333 33 37899998888 9999999999999999999999998843 655543
Q ss_pred cCCCcccccccCCCCCccEEEecCccccc-------CCccEEeeC
Q 019931 297 GKNGGGVAEQFNCERDVDICVGTLSKAAG-------CQGGFIACR 334 (334)
Q Consensus 297 G~~G~g~~~~~~~~~~~Div~~SlsKa~G-------~~GG~i~~~ 334 (334)
... .. .++|++++| +|.|| ..+||++++
T Consensus 241 ~~~-----~~----~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~ 275 (438)
T 1wyu_A 241 KPP-----GA----YGADIAVGD-GQSLGLPMGFGGPHFGFLATK 275 (438)
T ss_dssp CCH-----HH----HTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC
T ss_pred CCC-----cc----CCCCEEEEC-CcccCCCccCCCCCeeEEEEc
Confidence 211 11 246899988 67543 223777653
No 229
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.43 E-value=5.2e-12 Score=123.74 Aligned_cols=207 Identities=13% Similarity=0.085 Sum_probs=132.6
Q ss_pred eeEEEeecCccCCCC----CCHHHHHHHHHhc-CC-CCccccccCchHHHHHHHHHHHhHhCC----Cc--EEEeccHHH
Q 019931 109 KRLLLFSGNDYLGLS----SHPTIAKAAARHG-MG-PRGSALICGYTNYHRLLESCLADLKKK----ED--CLLCPTGFA 176 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~----~~p~v~~a~~~~g-~g-~~~sr~~~G~~~~~~~LE~~La~~~g~----e~--alv~~sG~~ 176 (334)
+.-||++-.-|..=. .-|.|++|.++.- .+ ...|....|..++.+.+.+.+ +|. +. .+-+.+|+.
T Consensus 44 ~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~~~~~~~qt~ggtg 120 (420)
T 4h51_A 44 GPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVELENLVAVQTLSGTG 120 (420)
T ss_dssp SSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CGGGEEEEEEEHHHH
T ss_pred CCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccccccceeeecCchH
Confidence 335787766554322 2367888765432 22 234667778755544443332 231 12 344678888
Q ss_pred HHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcE-EEEeeC-------CCHHHHHHHHhc
Q 019931 177 ANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVE-VFVYKH-------CDMSHLKTLLSC 248 (334)
Q Consensus 177 An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~-v~~~~~-------~D~~~Le~~l~~ 248 (334)
|+..++..+... ..++||.|++..+.+.+....++.. |.+ +..|+. .|.+.+.+.++.
T Consensus 121 a~~~a~~~l~~~----------~~~pgd~V~ip~P~w~~y~~i~~~a----G~~~V~~~~~~~~~~~~~d~~~~~~~l~~ 186 (420)
T 4h51_A 121 AVSLGAKLLTRV----------FDAETTPIYLSDPTWPNHYGVVKAA----GWKNICTYAYYDPKTVSLNFEGMKKDILA 186 (420)
T ss_dssp HHHHHHHHHTTT----------SCTTTSCEEEEESCCTHHHHHHHHT----TCCCEEEEECEEGGGTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----------cCCCCCEEEEecCCchhHHHHHHHc----CCeEEEeeccccccccCCCHHHHHHHHhc
Confidence 888877766542 1124777777777777777777776 554 444432 277888888876
Q ss_pred CCCCcEEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEecCcccccccCCCccc-c-cc-cCCCCCccEEEecCcc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAP---MVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGV-A-EQ-FNCERDVDICVGTLSK 322 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~p---L~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~-~-~~-~~~~~~~Div~~SlsK 322 (334)
.++++++++..+++||+|...+ +++|.++|++++++++.|++|....+|..-... . .. ...... -|++.||||
T Consensus 187 ~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~SK 265 (420)
T 4h51_A 187 APDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIE-VLLAQSFSK 265 (420)
T ss_dssp SCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC-CEEEEECTT
T ss_pred cCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCce-EEEEecccc
Confidence 6667889999999999998876 778999999999999999999864443211100 0 00 111122 388899999
Q ss_pred cccCCc---cEEee
Q 019931 323 AAGCQG---GFIAC 333 (334)
Q Consensus 323 a~G~~G---G~i~~ 333 (334)
+|++.| |++++
T Consensus 266 ~~~~~G~RvG~~~~ 279 (420)
T 4h51_A 266 NMGLYSERAGTLSL 279 (420)
T ss_dssp TSCCGGGCEEEEEE
T ss_pred ccccccCceEEEEe
Confidence 999877 77654
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.41 E-value=1.1e-13 Score=135.59 Aligned_cols=186 Identities=11% Similarity=-0.004 Sum_probs=127.0
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc--CCCC--cccccc-CchHHHHHHHHHHHhHhC--------CCcEEEeccHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG--MGPR--GSALIC-GYTNYHRLLESCLADLKK--------KEDCLLCPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g--~g~~--~sr~~~-G~~~~~~~LE~~La~~~g--------~e~alv~~sG~ 175 (334)
...++|..++. .+..++.+++++.+.- .+.. ++.... | .....+|+++++++++ .++++++++++
T Consensus 56 ~~~i~l~~g~~-~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~ 133 (427)
T 2hox_A 56 GCSADVASGDG-LFLEEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVT 133 (427)
T ss_dssp TCCEECCSCCC-GGGHHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHH
T ss_pred CceEEecCcCC-CCCCCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHH
Confidence 45678887764 3444566666766532 2221 122222 4 1124678888888764 24678888889
Q ss_pred HHHHHHHHHH--------hhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHh
Q 019931 176 AANMAVIVAV--------GNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLS 247 (334)
Q Consensus 176 ~An~~ai~al--------~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~ 247 (334)
+|+..++.++ +. +||.|+++.+.|..+...++.. +++++.+. .|+++|+++++
T Consensus 134 ~al~~~~~~l~~~~~~~~~~--------------~Gd~Vlv~~P~y~~~~~~~~~~----g~~~~~~~-~d~~~l~~~~~ 194 (427)
T 2hox_A 134 QLIHGLVISLSPNMTATPDA--------------PESKVVAHAPFYPVFREQTKYF----DKKGYVWA-GNAANYVNVSN 194 (427)
T ss_dssp HHHHHHHHHHSCCTTTCTTS--------------CCEEEEECSSCCHHHHHHHHHS----CBTTEEEE-EEGGGGTTCSC
T ss_pred HHHHHHHHHHhhccccccCC--------------CCCEEEEeCCCcccHHHHHHHc----CCeeeeec-CCHHHHHHhhc
Confidence 9999999988 54 3899999999998888887766 66666554 47788887665
Q ss_pred cCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCC
Q 019931 248 CCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQ 327 (334)
Q Consensus 248 ~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~ 327 (334)
+ ++++|++.+++||+|.+.+ + + ++ ++..+.|+++-. + ...+. .+..+.+|+++||||.+|..
T Consensus 195 ~---~~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~----~-~~s~~---~~~~~~~i~~~S~SK~~g~~ 256 (427)
T 2hox_A 195 P---EQYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYW----P-HYTPI---KYKADEDILLFTMSKFTGHS 256 (427)
T ss_dssp G---GGEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCS----T-TTSCC---CSCBCCSEEEEEHHHHTSCG
T ss_pred C---CceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccC----C-CCCcc---ccCCCceEEEEeChhcCCCC
Confidence 3 6788888899999999988 4 2 23 567888887631 1 11111 12245689999999999977
Q ss_pred c---cEEee
Q 019931 328 G---GFIAC 333 (334)
Q Consensus 328 G---G~i~~ 333 (334)
| ||+++
T Consensus 257 G~RiG~~~~ 265 (427)
T 2hox_A 257 GSRFGWALI 265 (427)
T ss_dssp GGCCEEEEE
T ss_pred CceEEEEEE
Confidence 7 99876
No 231
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.40 E-value=8.3e-14 Score=134.01 Aligned_cols=184 Identities=11% Similarity=-0.028 Sum_probs=116.1
Q ss_pred EEEeecCccCCCCCCHHHHHHHHHhcCCCCc-cccccCchHHHHHHHHHHHhHhCCC---cEEE-eccHHHHHHHHHHHH
Q 019931 111 LLLFSGNDYLGLSSHPTIAKAAARHGMGPRG-SALICGYTNYHRLLESCLADLKKKE---DCLL-CPTGFAANMAVIVAV 185 (334)
Q Consensus 111 ~l~f~sn~yLgl~~~p~v~~a~~~~g~g~~~-sr~~~G~~~~~~~LE~~La~~~g~e---~alv-~~sG~~An~~ai~al 185 (334)
.++|..+.+ ..+|.|++++.+++....+ +.......+..+++++++++++|.+ .+++ +++|++|+..++.++
T Consensus 41 ~~~~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l 117 (398)
T 2fyf_A 41 DGRFGSGPS---KVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL 117 (398)
T ss_dssp SCBCCSSSC---CCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred CccccCCCC---CCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence 345554432 3578999988775322111 1111222346789999999999975 4566 789999999999987
Q ss_pred hhhhhhccCCCccCCCCC-eEEEEcCCCchhhHH-HHHHhhhcCCcEEEEeeCCC--HHHHHHHHhcCCCCcEEEEEcCC
Q 019931 186 GNIASLLAGDEKSFKDEK-IAIFSDALNHASIID-GIRIAERTKMVEVFVYKHCD--MSHLKTLLSCCTMRKKVVVTDSL 261 (334)
Q Consensus 186 ~~~~~~~~~~~~~~~~~g-d~Vl~d~~~H~s~~~-g~~ls~~~~g~~v~~~~~~D--~~~Le~~l~~~~~~~~lVv~e~v 261 (334)
+++ + ++| ....|..... ...... .+++++.++.++ ..+. .+ .+++++|++.++
T Consensus 118 ~~~--------------gv~~v--~~~~~~~~~~~~~~~~~--~g~~~~~v~~~~g~~~~~--~i---~~~~~~v~~~~~ 174 (398)
T 2fyf_A 118 IDK--------------RSLHL--TYGEFSAKFASAVSKNP--FVGEPIIITSDPGSAPEP--QT---DPSVDVIAWAHN 174 (398)
T ss_dssp CSS--------------CEEEE--ECSHHHHHHHHHHHHCT--TSCCCEEEECCTTCCCCC--CC---CTTCSEEEEESE
T ss_pred cCC--------------CeEEE--eCCHHHHHHHHHHHHhC--CCCceEEEecCCCCCCCc--cc---cCCCCEEEEeCc
Confidence 653 5 444 3444532211 111110 144555554321 1111 12 246889998899
Q ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc--cEEee
Q 019931 262 FSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG--GFIAC 333 (334)
Q Consensus 262 ~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G--G~i~~ 333 (334)
+|++|.+.|+++|.++ +|+++|+|++|+.+... .++. ++|+++.|+||.+|+.| |++++
T Consensus 175 ~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~---------~~~~-~~di~~~s~sK~~~~~gg~g~l~~ 235 (398)
T 2fyf_A 175 ETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLP---------VDIA-ETDAYYFAPQKNFASDGGLWLAIM 235 (398)
T ss_dssp ETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSC---------CCGG-GCSEEEECTTSTTCSCSSEEEEEE
T ss_pred CCCcceecchHHhhhh---cCCeEEEEeccccCCcc---------cCcc-cCcEEEEecCcccCCCCceEEEEE
Confidence 9999999999988887 89999999999865321 1222 36899999999999875 45554
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.37 E-value=5.1e-12 Score=124.50 Aligned_cols=164 Identities=14% Similarity=0.098 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHhHhCCCc--E-EEeccHH-HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhh
Q 019931 150 NYHRLLESCLADLKKKED--C-LLCPTGF-AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAER 225 (334)
Q Consensus 150 ~~~~~LE~~La~~~g~e~--a-lv~~sG~-~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~ 225 (334)
..-++++..+.+++|.+. . +++++++ +++.+++. .+++. ..+++.|+..+..|.|+..++.+.
T Consensus 98 ~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~-aar~~----------~~~~~~viv~r~aHkSv~kAl~l~-- 164 (450)
T 3bc8_A 98 KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFL-TLRHK----------RPKAKYIIWPRIDQKSCFKSMVTA-- 164 (450)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHH-HHHHH----------CTTCCEEEEECCCCHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHH-Hcchh----------hcCCCEEEEECCcHHHHHHHHHHc--
Confidence 344567777777778654 3 6667776 45554444 44430 012466777788999999999999
Q ss_pred cCCcEEEEeeC--------CCHHHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccc
Q 019931 226 TKMVEVFVYKH--------CDMSHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVC 296 (334)
Q Consensus 226 ~~g~~v~~~~~--------~D~~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~ 296 (334)
|..++.++. .|++.|+++|++.+ ..+.+|++.+.++..|.+.|+++|+++|++||++|+||+||+...
T Consensus 165 --Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~- 241 (450)
T 3bc8_A 165 --GFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQS- 241 (450)
T ss_dssp --TCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC-
T ss_pred --CCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhh-
Confidence 777666543 28999999998754 245566666655556789999999999999999999999998532
Q ss_pred cCCCcccccccCCC-CCccEEEecCcccccC-CccEE
Q 019931 297 GKNGGGVAEQFNCE-RDVDICVGTLSKAAGC-QGGFI 331 (334)
Q Consensus 297 G~~G~g~~~~~~~~-~~~Div~~SlsKa~G~-~GG~i 331 (334)
.. ...+.. ..+. .++|+++.|.+|.+.. .||.+
T Consensus 242 ~~-~~~l~~-~a~~~~~AD~~v~S~HK~l~a~~~~~~ 276 (450)
T 3bc8_A 242 SK-CMHLIQ-QGARVGRIDAFVQSLDKNFMVPVGGAI 276 (450)
T ss_dssp HH-HHHHHH-HHHHHSCCCEEEEEHHHHHSCCSSCEE
T ss_pred hh-hHhHHH-HHhcccCCCEEEECCccCCCchhccEE
Confidence 11 000110 0111 3689999999999966 45443
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=121.12 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=104.8
Q ss_pred EEEeccHHHHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeC--------CCH
Q 019931 168 CLLCPTGFAANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKH--------CDM 239 (334)
Q Consensus 168 alv~~sG~~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~--------~D~ 239 (334)
.++.++++.++++++.+.++++. .+++.|+..+..|.|++.++.++ |.++++++. .|+
T Consensus 137 ~flVnGsTgg~lamilaa~r~~r----------pg~d~VIvpRn~HKSv~kAliL~----Gl~Pv~V~p~~d~~~~~id~ 202 (501)
T 3hl2_A 137 CFVVPMATGMSLTLCFLTLRHKR----------PKAKYIIWPRIDQKSCFKSMITA----GFEPVVIENVLEGDELRTDL 202 (501)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHC----------TTCCEEEEECCCCHHHHHHHHHT----TCEEEEECEEEETTEEEECH
T ss_pred EEEECcHHHHHHHHHHHHcCccc----------CCCCEEEEecchHHHHHHHHHHc----CCeEEEEeeeecccccCCCH
Confidence 46667777688888877776510 02478888999999999999999 888776643 289
Q ss_pred HHHHHHHhcCC-CCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccc-cccCCCCCccEEE
Q 019931 240 SHLKTLLSCCT-MRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVA-EQFNCERDVDICV 317 (334)
Q Consensus 240 ~~Le~~l~~~~-~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~-~~~~~~~~~Div~ 317 (334)
+.||++|++.+ ....+|++.+.++-.+.+.|+++|+++|++||++|+||+||+.-. .. ...+. +.+.+ ..+|+++
T Consensus 203 e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~-~~-~~~lp~sA~~~-GrAD~vV 279 (501)
T 3hl2_A 203 KAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQS-SK-CMHLIQQGARV-GRIDAFV 279 (501)
T ss_dssp HHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTC-HH-HHHHHHHHHHH-SCCCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhh-hh-hhhhHHHHHhc-CCCcEEE
Confidence 99999998763 233455565555544577899999999999999999999998642 11 00010 11111 2489999
Q ss_pred ecCcccccC-CccEEe
Q 019931 318 GTLSKAAGC-QGGFIA 332 (334)
Q Consensus 318 ~SlsKa~G~-~GG~i~ 332 (334)
.|.+|.+=. .||.++
T Consensus 280 qS~HK~llvpIGG~ii 295 (501)
T 3hl2_A 280 QSLDKNFMVPVGGAII 295 (501)
T ss_dssp EEHHHHHCCCSSCEEE
T ss_pred ecccccceeecCceEE
Confidence 999999843 566544
No 234
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.17 E-value=7.1e-11 Score=114.15 Aligned_cols=184 Identities=12% Similarity=-0.013 Sum_probs=119.1
Q ss_pred CccCCCCCCHHHHHHHHHhc-----CCCCc---cccccCchHHHHHHHHHHHhHhCCC--c-EEEe-ccHHHHHHHHHHH
Q 019931 117 NDYLGLSSHPTIAKAAARHG-----MGPRG---SALICGYTNYHRLLESCLADLKKKE--D-CLLC-PTGFAANMAVIVA 184 (334)
Q Consensus 117 n~yLgl~~~p~v~~a~~~~g-----~g~~~---sr~~~G~~~~~~~LE~~La~~~g~e--~-alv~-~sG~~An~~ai~a 184 (334)
|.+--..-+|+|.+++.++- .+++. +....-.....++.+++|++++|++ + ++|+ .+|++++..++..
T Consensus 17 n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~ 96 (377)
T 3e77_A 17 NLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLN 96 (377)
T ss_dssp CEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHh
Confidence 33444446899999887643 22221 1111112466789999999999975 3 4553 5889999999988
Q ss_pred HhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-----CHHHHHHHHhcCCCCcEEEEEc
Q 019931 185 VGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-----DMSHLKTLLSCCTMRKKVVVTD 259 (334)
Q Consensus 185 l~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-----D~~~Le~~l~~~~~~~~lVv~e 259 (334)
+..+ .+||.|+.-...|.+. .+...++ ..|..++.++.+ ++++++..++ +++++|.+.
T Consensus 97 l~~~------------~~Gd~v~~~~~g~~~~-~~~~~a~-~~G~~~~~~~~~~~~~~~~~~~~~~i~---~~t~lV~~~ 159 (377)
T 3e77_A 97 LIGL------------KAGRCADYVVTGAWSA-KAAEEAK-KFGTINIVHPKLGSYTKIPDPSTWNLN---PDASYVYYC 159 (377)
T ss_dssp HGGG------------STTCEEEECCCSHHHH-HHHHHHT-TTSEEEECSCCCSSSCSCCCGGGCCCC---TTCSCEEEE
T ss_pred ccCC------------CCCCeEEEEECCHHHH-HHHHHHH-HhCCceEEeccCCCcCCCCChHHhccC---CCccEEEEe
Confidence 8753 1256665444445543 3344443 225665554432 4555544333 478888888
Q ss_pred CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEe
Q 019931 260 SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 260 ~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
+..+.+|.+.|+ +|+++|+++++|.+|++|... .++. +.++++.|-.|.+|+.| |++.
T Consensus 160 h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~---------id~~-~~~~~~~s~~K~~gp~G~g~l~ 218 (377)
T 3e77_A 160 ANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKP---------VDVS-KFGVIFAGAQKNVGSAGVTVVI 218 (377)
T ss_dssp SEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSC---------CCGG-GCSEEEEEGGGTTSCTTCEEEE
T ss_pred CccCchheEchh-----hhccCCCEEEEEcccccCCCC---------Cchh-hcCEEEEecccccCCCccEEEE
Confidence 888888999998 478899999999999987431 2222 23578899999999877 5554
No 235
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.05 E-value=8.6e-11 Score=113.86 Aligned_cols=174 Identities=13% Similarity=0.007 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHh-----cCCCCc---cccccCchHHHHHHHHHHHhHhCCC--c-EEE-eccHHHHHHHHHHHHhhhhhh
Q 019931 124 SHPTIAKAAARH-----GMGPRG---SALICGYTNYHRLLESCLADLKKKE--D-CLL-CPTGFAANMAVIVAVGNIASL 191 (334)
Q Consensus 124 ~~p~v~~a~~~~-----g~g~~~---sr~~~G~~~~~~~LE~~La~~~g~e--~-alv-~~sG~~An~~ai~al~~~~~~ 191 (334)
-+|+|++++.++ +.+++. +....-.....++.++.+++++|++ . +++ +++|++++..++..++.+
T Consensus 38 ~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~--- 114 (386)
T 3qm2_A 38 LPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGD--- 114 (386)
T ss_dssp CCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTT---
T ss_pred CCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCC---
Confidence 479999987543 333221 0111111345688999999999975 2 455 368999999999888754
Q ss_pred ccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC--------CHHHHHHHHhcCCCCcEEEEEcCCCC
Q 019931 192 LAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC--------DMSHLKTLLSCCTMRKKVVVTDSLFS 263 (334)
Q Consensus 192 ~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~--------D~~~Le~~l~~~~~~~~lVv~e~v~n 263 (334)
+|.|+.-...|.+- .+...+.+ .| ++..++.+ ++++++.+++ +++++|++.+..+
T Consensus 115 -----------gd~v~~~~~~~~~~-~~~~~a~~-~G-~v~~v~~~~~~~G~~~~~~~~~~~l~---~~t~lV~~~h~et 177 (386)
T 3qm2_A 115 -----------KTTADYVDAGYWAA-SAIKEAKK-YC-APQIIDAKITVDGKRAVKPMREWQLS---DNAAYLHYCPNET 177 (386)
T ss_dssp -----------CCEEEEEESSHHHH-HHHHHHTT-TS-EEEEEECEEEETTEEEECCGGGCCCC---TTCSCEEECSEET
T ss_pred -----------CCeEEEEeCCHHHH-HHHHHHHH-hC-CeEEEecCcccCCCCCCchHHHhhcC---CCCcEEEEECCcC
Confidence 45443222233332 23333322 25 56555432 4456655554 4788898888888
Q ss_pred CCCCc-cCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc-cEEe
Q 019931 264 MDGDF-APMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG-GFIA 332 (334)
Q Consensus 264 ~~G~~-~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G-G~i~ 332 (334)
.+|.+ .|+++|. +|+++++|.+|++|..- .++. +.|+++.|.+|.+|+.| |++.
T Consensus 178 ~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~p---------idv~-~~~~~~~s~hK~lGP~G~g~l~ 233 (386)
T 3qm2_A 178 IDGIAIDETPDFG-----PEVVVTADFSSTILSAP---------LDVS-RYGVIYAGAQKNIGPAGLTLVI 233 (386)
T ss_dssp TTTEECCCCCCCC-----TTCCEEEECTTTTTSSC---------CCGG-GCSEEEEETTTTTCCTTEEEEE
T ss_pred CcCEecCchhhhc-----CCCEEEEEcccccCCCC---------CCcc-ccCEEEEecccccCCCccEEEE
Confidence 88995 8998875 89999999999987431 2222 23577889999999877 6654
No 236
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.90 E-value=3.4e-09 Score=101.73 Aligned_cols=181 Identities=14% Similarity=0.047 Sum_probs=113.5
Q ss_pred eeEEEeecCccCCCCCCHHHHHHHHHhc-----CCCCc----cccccCchHHHHHHHHHHHhHhCCC---cEEE-eccHH
Q 019931 109 KRLLLFSGNDYLGLSSHPTIAKAAARHG-----MGPRG----SALICGYTNYHRLLESCLADLKKKE---DCLL-CPTGF 175 (334)
Q Consensus 109 ~~~l~f~sn~yLgl~~~p~v~~a~~~~g-----~g~~~----sr~~~G~~~~~~~LE~~La~~~g~e---~alv-~~sG~ 175 (334)
++.++|...- -.-+|+|++++.++- .+++. +|. .-.....++.++.+++++|++ .++| +++|+
T Consensus 4 ~~~~~f~pgp---t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~-~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T 79 (361)
T 3m5u_A 4 MRKINFSAGP---STLPLEILEQAQKELCDYQGRGYSIMEISHRT-KVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGAS 79 (361)
T ss_dssp CCCEECCSSS---CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSS-HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHH
T ss_pred cceEeecCCC---CCCcHHHHHHHHHHHHhcccCCceeeccCCCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHH
Confidence 3445665442 235899999887643 23221 111 112467788999999999974 3455 57889
Q ss_pred HHHHHHHHHHhhhhhhccCCCccCCCCCeEEEEcCCCchhhHHHHHHhhhcCCcEEEEeeCC-------CHHHHHHHHhc
Q 019931 176 AANMAVIVAVGNIASLLAGDEKSFKDEKIAIFSDALNHASIIDGIRIAERTKMVEVFVYKHC-------DMSHLKTLLSC 248 (334)
Q Consensus 176 ~An~~ai~al~~~~~~~~~~~~~~~~~gd~Vl~d~~~H~s~~~g~~ls~~~~g~~v~~~~~~-------D~~~Le~~l~~ 248 (334)
+++..++..+. ++ ++.++|+.....|. +...+.+ .|.++..++.+ +++. + |+
T Consensus 80 ~a~n~~~~~~~-~~-----------~~~~~i~~~~~~~~----~~~~a~~-~G~~v~~~~~~~~g~~~~~~~~-~--l~- 138 (361)
T 3m5u_A 80 LQFAMIPMNLA-LN-----------GVCEYANTGVWTKK----AIKEAQI-LGVNVKTVASSEESNFDHIPRV-E--FS- 138 (361)
T ss_dssp HHHHHHHHHHC-CS-----------SCEEEEECSHHHHH----HHHHHHH-TTCCEEEEEECTTTTSCSCCCC-C--CC-
T ss_pred HHHHHHHHhcC-CC-----------CeEEEEeCCHHHHH----HHHHHHH-cCCceEEEecccCcCCCcCChh-h--cC-
Confidence 99999998776 41 01233444333332 2222222 25666655422 3444 3 43
Q ss_pred CCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccccccCCCcccccccCCCCCccEEEecCcccccCCc
Q 019931 249 CTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTFVCGKNGGGVAEQFNCERDVDICVGTLSKAAGCQG 328 (334)
Q Consensus 249 ~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~Gv~G~~G~g~~~~~~~~~~~Div~~SlsKa~G~~G 328 (334)
+++++|.+.+..+.+|.+.|. +++ +|+++++|.+|++|.+ ..++. ++|+++.|.+|.+|+.|
T Consensus 139 --~~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~---------~id~~-~~d~~~~s~~K~~gp~G 200 (361)
T 3m5u_A 139 --DNADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR---------KVDFS-NIALFYGGVQKNAGISG 200 (361)
T ss_dssp --TTSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS---------CCCCT-TEEEEEEETTTTSSCTT
T ss_pred --CCCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC---------CCCcc-cCCEEEEechhccCCCc
Confidence 478888888888888988662 344 4999999999998743 12333 47999999999999877
Q ss_pred -cEEe
Q 019931 329 -GFIA 332 (334)
Q Consensus 329 -G~i~ 332 (334)
|++.
T Consensus 201 ~g~l~ 205 (361)
T 3m5u_A 201 LSCIF 205 (361)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 6654
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=71.60 E-value=4.5 Score=35.07 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|-+.|.+|..+.++++.++|++||+.++
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 57788888776889999999999999999998776
No 238
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=66.78 E-value=8.9 Score=31.35 Aligned_cols=55 Identities=20% Similarity=0.297 Sum_probs=40.6
Q ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCH----HHHH-HHHHHcCC-EEEEecCccc
Q 019931 237 CDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPM----VELV-KLRRKYGF-LLVLDDAHGT 293 (334)
Q Consensus 237 ~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL----~~L~-ela~k~ga-~LivDeAh~~ 293 (334)
.+.+.|.+++++. ++..|++.-|++|+|...+. ++++ .|++++++ +.++||.++.
T Consensus 42 ~~~~~l~~li~~~--~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 42 YGLSRLSELIKDY--TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CCHHHHHHHHTTS--EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHHc--CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 3788899999873 57788888889999988762 2333 45566776 5668998875
No 239
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=61.80 E-value=11 Score=32.63 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=30.0
Q ss_pred CcEEEEEcCC-CCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSL-FSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v-~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|-+ -|.+|..+.++++.++|++||+.++
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 5677888863 5578999999999999999999887
No 240
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=58.64 E-value=14 Score=32.35 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
.+..|++|=+ +.+|..+.++++.++|++||+.++
T Consensus 167 ~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 5677777755 678999999999999999999877
No 241
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=55.84 E-value=13 Score=32.77 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 252 RKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 252 ~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
.+..|++|=+ +.+|..+.++++.++|++||+.++.
T Consensus 178 ~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 5678888865 6789999999999999999988773
No 242
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=43.54 E-value=21 Score=31.37 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCCC-----------CCCccCHHHHHHHHHHcCCEEEE
Q 019931 252 RKKVVVTDSLFSM-----------DGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 252 ~~~lVv~e~v~n~-----------~G~~~pL~~L~ela~k~ga~Liv 287 (334)
.+..|++|-+ +. +|..+.++++.++|++||+.++.
T Consensus 167 ~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 167 RPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp CSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred CceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 5677777755 55 79999999999999999998873
No 243
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=43.51 E-value=13 Score=35.39 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=27.5
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..+|++|++-|+++|+.||+|-+..
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 34556888899999999999999999998754
No 244
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=42.41 E-value=86 Score=24.32 Aligned_cols=55 Identities=15% Similarity=0.147 Sum_probs=34.1
Q ss_pred CcEEEEeeCCCHHHHHHHHhc----CC---CC-cEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEE
Q 019931 228 MVEVFVYKHCDMSHLKTLLSC----CT---MR-KKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLV 286 (334)
Q Consensus 228 g~~v~~~~~~D~~~Le~~l~~----~~---~~-~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Li 286 (334)
+..+...+..|++.+.+.|.+ .+ .+ +.+|=++... ...++.+|.++++++|+.+|
T Consensus 16 ~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 16 TLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 344555666788776665543 21 12 2333333332 24689999999999999886
No 245
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=36.43 E-value=21 Score=34.40 Aligned_cols=32 Identities=6% Similarity=-0.051 Sum_probs=27.1
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+..
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44556888899999999999999999998743
No 246
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=36.05 E-value=20 Score=34.24 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=27.0
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+.-
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 34456888899999999999999999998754
No 247
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=35.43 E-value=22 Score=34.32 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=27.0
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+..
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 44456888899999999999999999998743
No 248
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=35.27 E-value=74 Score=23.77 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=33.6
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccC----HHHHH-HHHHHcCC-EEEEecCcc
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAP----MVELV-KLRRKYGF-LLVLDDAHG 292 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~p----L~~L~-ela~k~ga-~LivDeAh~ 292 (334)
+.+.|++++++. +...||+=-|.||+|...+ ..++. +|.++ ++ +.++||-.+
T Consensus 39 ~~~~l~~li~e~--~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRRE--GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHH--TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEECCSCC
T ss_pred HHHHHHHHHHHc--CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEECCCCC
Confidence 577888888764 4556666678889998776 23333 34444 65 446888654
No 249
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=34.68 E-value=23 Score=34.12 Aligned_cols=32 Identities=9% Similarity=-0.039 Sum_probs=26.9
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+..
T Consensus 73 idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 44456888889999999999999999998643
No 250
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=34.10 E-value=23 Score=34.52 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=27.1
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+..
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 105 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAAGMQVYADVVFD 105 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 44456888899999999999999999998743
No 251
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=33.49 E-value=21 Score=33.87 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=25.3
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+..
T Consensus 65 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 93 (441)
T 1lwj_A 65 EYGSEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34778889999999999999999998743
No 252
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=31.15 E-value=24 Score=34.15 Aligned_cols=28 Identities=25% Similarity=0.287 Sum_probs=24.8
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|++.|+.||+|-+..
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 4778889999999999999999998754
No 253
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=31.07 E-value=28 Score=33.09 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=26.7
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+..
T Consensus 79 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 79 VETRFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 34456888889999999999999999998754
No 254
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=31.02 E-value=29 Score=33.97 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=26.1
Q ss_pred CCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 263 SMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 263 n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+..|+..++++|++-|+++|+.||+|-+..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 445888889999999999999999997654
No 255
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=29.49 E-value=83 Score=27.89 Aligned_cols=57 Identities=7% Similarity=0.061 Sum_probs=37.2
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEc----CCCCCCCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTD----SLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e----~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
+++++...++.. ..+..+++++ +..+..-...+|..+..+.+.++..+|+|-.|+.|
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g 204 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAG 204 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTC
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCC
Confidence 555555554321 1245667666 32233334557888988988889999999999976
No 256
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=28.68 E-value=28 Score=33.35 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=25.6
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+..
T Consensus 93 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 93 NYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp TSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 45778899999999999999999998754
No 257
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=27.87 E-value=65 Score=28.91 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=39.2
Q ss_pred CHHHHHHHHhcC--CCCcEEEEEc-CCCCC---CCCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 238 DMSHLKTLLSCC--TMRKKVVVTD-SLFSM---DGDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 238 D~~~Le~~l~~~--~~~~~lVv~e-~v~n~---~G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
++++++..++.. ..+..+++++ ++.+. .-...++..|..+.+.+++.+++|-.|+.|
T Consensus 157 t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 566666555432 2345778877 55331 234567888999988889999999999976
No 258
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=27.86 E-value=30 Score=32.46 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=24.8
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+..
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34777889999999999999999998754
No 259
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=27.29 E-value=38 Score=29.57 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=18.3
Q ss_pred cCHHHHHHHHHHcCCEEEEec
Q 019931 269 APMVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 269 ~pL~~L~ela~k~ga~LivDe 289 (334)
..++++.++|+++|+++|+|-
T Consensus 90 ~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 90 DDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEe
Confidence 347899999999999999885
No 260
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=27.06 E-value=31 Score=33.94 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=25.2
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+..
T Consensus 75 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 75 EYGTMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 34778889999999999999999998753
No 261
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=27.03 E-value=29 Score=32.94 Aligned_cols=28 Identities=21% Similarity=0.283 Sum_probs=23.5
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 80 ~Gt~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 80 YGTLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4566679999999999999999998743
No 262
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=26.84 E-value=52 Score=26.30 Aligned_cols=54 Identities=19% Similarity=0.399 Sum_probs=37.0
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHH----HH-HHHHHHcCC-EEEEecCccc
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMV----EL-VKLRRKYGF-LLVLDDAHGT 293 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~----~L-~ela~k~ga-~LivDeAh~~ 293 (334)
+.+.|++++++. +...||+=-|.||+|...|.. ++ .+|.+++++ +.++||-.++
T Consensus 41 ~~~~l~~li~e~--~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 41 DWNIIERLLKEW--QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp CHHHHHHHHHHH--CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred HHHHHHHHHHHc--CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 789999999874 345555556788999888733 22 234555775 5679997765
No 263
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=25.14 E-value=30 Score=32.88 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=16.0
Q ss_pred CCccCHHHHHHHHHHcCCEEEEecCc
Q 019931 266 GDFAPMVELVKLRRKYGFLLVLDDAH 291 (334)
Q Consensus 266 G~~~pL~~L~ela~k~ga~LivDeAh 291 (334)
|+..++++|++-|+++|+.||+|-+.
T Consensus 79 Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 44555666666666666666666543
No 264
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=24.99 E-value=26 Score=33.70 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=26.3
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+.-
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 98 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVIN 98 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 33445778889999999999999999998743
No 265
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=24.98 E-value=57 Score=26.65 Aligned_cols=45 Identities=11% Similarity=0.107 Sum_probs=28.7
Q ss_pred CHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE
Q 019931 238 DMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL 287 (334)
Q Consensus 238 D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv 287 (334)
+++.+.++|++.+ ++.+++-..+.. ..-.+++.+++++.|+.++.
T Consensus 23 ~v~~aa~~L~~Ak-rPvil~G~g~~~----~~a~~~l~~lae~~~iPV~~ 67 (170)
T 3cf4_G 23 SPEMAAKIISKAK-RPLLMVGTLALD----PELLDRVVKISKAANIPIAA 67 (170)
T ss_dssp CHHHHHHHHHHCS-SEEEEECSTTCC----HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHcCC-CCEEEECCCccc----hhHHHHHHHHHHHhCCCEEE
Confidence 5777777777642 444444333221 11267899999999999876
No 266
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.66 E-value=36 Score=34.49 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-||++|+.||+|-+..
T Consensus 103 ~~Gt~~df~~Lv~~aH~~GikVilD~V~N 131 (686)
T 1qho_A 103 HFGNWTTFDTLVNDAHQNGIKVIVDFVPN 131 (686)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 45889999999999999999999997653
No 267
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=24.63 E-value=36 Score=34.49 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=25.5
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-||++|+.||+|-+.-
T Consensus 111 ~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 139 (686)
T 1d3c_A 111 AYGTIADFQNLIAAAHAKNIKVIIDFAPN 139 (686)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCcC
Confidence 45889999999999999999999997643
No 268
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=24.54 E-value=36 Score=34.42 Aligned_cols=29 Identities=21% Similarity=0.299 Sum_probs=25.3
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-||++|+.||+|-+.-
T Consensus 107 ~~Gt~~df~~Lv~~aH~~GIkVilD~V~N 135 (680)
T 1cyg_A 107 FFGTLSDFQRLVDAAHAKGIKVIIDFAPN 135 (680)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35788999999999999999999997643
No 269
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=24.39 E-value=34 Score=32.84 Aligned_cols=29 Identities=17% Similarity=0.148 Sum_probs=25.4
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+..
T Consensus 93 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 93 NFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 45778889999999999999999998754
No 270
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=24.14 E-value=40 Score=33.72 Aligned_cols=32 Identities=6% Similarity=0.051 Sum_probs=26.9
Q ss_pred CCCCCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 261 LFSMDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 261 v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
+.+..|+..++++|++-|+++|+.||+|-+.-
T Consensus 201 idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 232 (599)
T 3bc9_A 201 VRTKYGTKGELENAIDALHNNDIKVYFDAVLN 232 (599)
T ss_dssp SSBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34456888999999999999999999998743
No 271
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=24.12 E-value=29 Score=33.22 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=24.8
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..+++++++-|+++|+.||+|-+..
T Consensus 93 ~Gt~~df~~lv~~~h~~Gi~VilD~V~N 120 (475)
T 2z1k_A 93 LGGNEALRHLLEVAHAHGVRVILDGVFN 120 (475)
T ss_dssp GTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4778899999999999999999998754
No 272
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.75 E-value=40 Score=32.36 Aligned_cols=28 Identities=18% Similarity=0.304 Sum_probs=24.3
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~N 105 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPIN 105 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 3667789999999999999999998743
No 273
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=23.49 E-value=4.3e+02 Score=24.24 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=35.8
Q ss_pred EEEEeeCCCHHHH-HHHHhc---C-CCCcEEEEEcCCCCCCC------Cc--------cC-------HHHHHHHHHHcCC
Q 019931 230 EVFVYKHCDMSHL-KTLLSC---C-TMRKKVVVTDSLFSMDG------DF--------AP-------MVELVKLRRKYGF 283 (334)
Q Consensus 230 ~v~~~~~~D~~~L-e~~l~~---~-~~~~~lVv~e~v~n~~G------~~--------~p-------L~~L~ela~k~ga 283 (334)
++..+..++.+++ ..+++. . ..++.+||+|++..+.- .+ .- |.+|..+++++|+
T Consensus 84 ~llv~~~~~~E~~~l~i~~~l~~i~~~~~~lvVIDSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i 163 (333)
T 3io5_A 84 RVIHTPVQSLEQLRIDMVNQLDAIERGEKVVVFIDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNI 163 (333)
T ss_dssp GEEEEECSBHHHHHHHHHHHHHTCCTTCCEEEEEECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HeEEEcCCCHHHHHHHHHHHHHHhhccCceEEEEecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4555666666655 333221 1 23678999999988631 11 11 4456667999997
Q ss_pred EE-EEecCccccc
Q 019931 284 LL-VLDDAHGTFV 295 (334)
Q Consensus 284 ~L-ivDeAh~~Gv 295 (334)
.+ ++..++..|+
T Consensus 164 ~vi~tNQV~k~G~ 176 (333)
T 3io5_A 164 PCIAINHTYETQE 176 (333)
T ss_dssp EEEEEEEC-----
T ss_pred EEEEECCeeecCc
Confidence 65 4555554443
No 274
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=23.32 E-value=2.5e+02 Score=25.04 Aligned_cols=86 Identities=7% Similarity=0.022 Sum_probs=48.8
Q ss_pred eEEEEcCCCch----hhHHHHHHhhhcCCcEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHH
Q 019931 204 IAIFSDALNHA----SIIDGIRIAERTKMVEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRR 279 (334)
Q Consensus 204 d~Vl~d~~~H~----s~~~g~~ls~~~~g~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~ 279 (334)
|.++...+... .++..+.-......++.+-+...+.+.++++++... ....+....+|+. .+-.++.+.|+
T Consensus 123 Dl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~~~Q~~~~~~---~~~~~l~~~~~ 197 (298)
T 3up8_A 123 DLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSD--APIATNQVEYHPY---LDQTKVLQTAR 197 (298)
T ss_dssp EEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCS--SCEEEEEEECBTT---BCCHHHHHHHH
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCC--CCceEEEEecccc---cccHHHHHHHH
Confidence 56665443321 233443333222233444445568899999887642 2455555556652 22468999999
Q ss_pred HcCCEEEEecCcccc
Q 019931 280 KYGFLLVLDDAHGTF 294 (334)
Q Consensus 280 k~ga~LivDeAh~~G 294 (334)
++|+.++.=..-+.|
T Consensus 198 ~~gi~v~a~spL~~G 212 (298)
T 3up8_A 198 RLGMSLTSYYAMANG 212 (298)
T ss_dssp HHTCEEEEECTTGGG
T ss_pred HCCCEEEEECCCcCC
Confidence 999999865444433
No 275
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=23.31 E-value=30 Score=34.19 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=24.4
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 89 ~Gt~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 89 YGTMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4667789999999999999999998754
No 276
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=23.22 E-value=27 Score=33.69 Aligned_cols=28 Identities=21% Similarity=0.262 Sum_probs=24.7
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 99 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 126 (488)
T 2wc7_A 99 LGGNEAFKELLDAAHQRNIKVVLDGVFN 126 (488)
T ss_dssp GTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4778889999999999999999998654
No 277
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=23.01 E-value=41 Score=34.09 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=25.5
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-||++|+.||+|-+.-
T Consensus 112 ~~Gt~~dfk~Lv~~aH~~GikVilD~V~N 140 (683)
T 3bmv_A 112 YFGSFTDFQNLINTAHAHNIKVIIDFAPN 140 (683)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 35789999999999999999999998753
No 278
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=22.78 E-value=42 Score=33.41 Aligned_cols=29 Identities=28% Similarity=0.228 Sum_probs=25.4
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+.||+|-+.-
T Consensus 194 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 194 RYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 34778889999999999999999998754
No 279
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=22.76 E-value=47 Score=33.35 Aligned_cols=28 Identities=18% Similarity=0.213 Sum_probs=23.0
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 159 ~Gt~~d~~~Lv~~ah~~GI~VilD~V~N 186 (628)
T 1g5a_A 159 LGTIGDLREVIAALHEAGISAVVDFIFN 186 (628)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3455568999999999999999998753
No 280
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=22.69 E-value=42 Score=33.35 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=24.6
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 84 ~Gt~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 84 YGTNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4778889999999999999999998744
No 281
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=22.61 E-value=1.6e+02 Score=27.69 Aligned_cols=58 Identities=9% Similarity=0.128 Sum_probs=38.1
Q ss_pred CCHHHHHHHHhcC--CCCcEEEEEcC-CCC-CC--CCccCHHHHHHHHHHcCCEEEEecCcccc
Q 019931 237 CDMSHLKTLLSCC--TMRKKVVVTDS-LFS-MD--GDFAPMVELVKLRRKYGFLLVLDDAHGTF 294 (334)
Q Consensus 237 ~D~~~Le~~l~~~--~~~~~lVv~e~-v~n-~~--G~~~pL~~L~ela~k~ga~LivDeAh~~G 294 (334)
.++++++..++.. ..+..+++++. +.+ ++ -...+|..|..+.+.+++.+++|-.|+.|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 3555555554422 13456777774 433 11 23457888888988899999999999864
No 282
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.29 E-value=43 Score=33.16 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=25.1
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+-||+|-+..
T Consensus 218 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 218 HFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 34778889999999999999999998754
No 283
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=22.08 E-value=33 Score=33.76 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=24.4
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 75 FGTMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4677889999999999999999998753
No 284
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=21.82 E-value=2e+02 Score=25.81 Aligned_cols=62 Identities=16% Similarity=0.132 Sum_probs=36.9
Q ss_pred cEEEEeeCCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEecCccc
Q 019931 229 VEVFVYKHCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVLDDAHGT 293 (334)
Q Consensus 229 ~~v~~~~~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~LivDeAh~~ 293 (334)
++.+-+...+.+.|+++++...-+...++....+|+. .+-.++.+.|+++|+.++.=..-+.
T Consensus 161 ir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~---~~~~~l~~~~~~~gi~v~a~spL~~ 222 (324)
T 3ln3_A 161 VXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLY---LNQRXLLDYCESXDIVLVAYGALGT 222 (324)
T ss_dssp EEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTT---BCCHHHHHHHHHTTCEEEEESTTSC
T ss_pred eeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcc---cchHHHHHHHHHcCCEEEEecCCCC
Confidence 3444445558899999887532221122333334442 1236899999999999986544443
No 285
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=21.20 E-value=54 Score=29.80 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=19.4
Q ss_pred cCHHHHHHHHHHcCCEEEEecCcc
Q 019931 269 APMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 269 ~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..+++++++|+++|+++|+|- |.
T Consensus 105 ~~ld~~v~~a~~~Gi~VilD~-H~ 127 (327)
T 3pzt_A 105 NKVKEAVEAAKELGIYVIIDW-HI 127 (327)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE-EC
T ss_pred HHHHHHHHHHHHCCCEEEEEe-cc
Confidence 347899999999999999984 54
No 286
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=20.97 E-value=36 Score=33.47 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=24.2
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 75 ~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 75 FGTMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4667789999999999999999997643
No 287
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=20.91 E-value=84 Score=31.05 Aligned_cols=19 Identities=16% Similarity=0.350 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCEEEEec
Q 019931 271 MVELVKLRRKYGFLLVLDD 289 (334)
Q Consensus 271 L~~L~ela~k~ga~LivDe 289 (334)
.++|.++|++||+.||+++
T Consensus 58 a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 58 ALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHhcCCEEEEeC
Confidence 4568889999999888866
No 288
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=20.76 E-value=1.1e+02 Score=25.93 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHhcCCCCcEEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEE--ecCcc
Q 019931 236 HCDMSHLKTLLSCCTMRKKVVVTDSLFSMDGDFAPMVELVKLRRKYGFLLVL--DDAHG 292 (334)
Q Consensus 236 ~~D~~~Le~~l~~~~~~~~lVv~e~v~n~~G~~~pL~~L~ela~k~ga~Liv--DeAh~ 292 (334)
-.|+++|+++++. +...|++ .+|++..++++++.++++|-.+++ |-+.+
T Consensus 16 vr~~~~l~~al~s---~~~~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~G 66 (192)
T 3kts_A 16 AHNQKDMEKILEL---DLTYMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNG 66 (192)
T ss_dssp ESSSHHHHHHTTS---SCCEEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEET
T ss_pred ecCHHHHHHHHcC---CCCEEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhc
Confidence 3588999999874 2334433 246788899999999999865554 44443
No 289
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.67 E-value=46 Score=32.98 Aligned_cols=29 Identities=24% Similarity=0.397 Sum_probs=23.8
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|+++|+-||+|-+..
T Consensus 215 ~~Gt~~dfk~lv~~~H~~Gi~VilD~V~N 243 (585)
T 1wzl_A 215 QFGDLPTFRRLVDEAHRRGIKIILDAVFN 243 (585)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 34667779999999999999999997654
No 290
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=20.56 E-value=34 Score=33.61 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=24.2
Q ss_pred CCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 265 DGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 265 ~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
.|+..++++|++-|+++|+.||+|-+..
T Consensus 75 ~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (543)
T 2zic_A 75 FGNMADMDNLLTQAKMRGIKIIMDLVVN 102 (543)
T ss_dssp GCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 4677889999999999999999998743
No 291
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=20.35 E-value=52 Score=32.58 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=22.5
Q ss_pred CCCCccCHHHHHHHHHHcCCEEEEecCcc
Q 019931 264 MDGDFAPMVELVKLRRKYGFLLVLDDAHG 292 (334)
Q Consensus 264 ~~G~~~pL~~L~ela~k~ga~LivDeAh~ 292 (334)
..|+..++++|++-|++.|+-||+|-+..
T Consensus 214 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 242 (583)
T 1ea9_C 214 QFGDKDTLKKLVDLCHERGIRVLLDAVFN 242 (583)
T ss_dssp TTCCHHHHHHHHHHHTTTTCEEEEECCCS
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEccc
Confidence 34666778888888888888888887654
Done!