Query 019932
Match_columns 334
No_of_seqs 248 out of 1781
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 09:16:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019932.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019932hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f69a1 b.76.2.1 (A:116-193) H 72.2 2.7 0.0002 29.9 4.8 46 251-296 1-49 (78)
2 d2f69a1 b.76.2.1 (A:116-193) H 60.1 6.4 0.00046 27.9 4.7 43 207-249 3-48 (78)
3 d2qqra2 b.34.9.1 (A:956-1011) 16.4 1.4E+02 0.01 19.4 5.5 12 258-269 12-23 (56)
4 d1rwia_ b.68.9.1 (A:) Serine/t 9.4 2.4E+02 0.017 21.9 5.9 62 253-318 185-246 (260)
5 d1oedc_ f.36.1.1 (C:) Acetylch 7.6 1.2E+02 0.0085 24.2 3.1 60 90-154 23-82 (260)
6 d2psba1 c.153.1.1 (A:13-308) U 7.0 1.7E+02 0.012 24.6 3.9 13 280-292 247-259 (296)
7 d1k4ta3 e.15.1.1 (A:201-430) E 6.3 79 0.0057 26.4 1.1 12 94-105 148-159 (230)
8 d2dg1a1 b.68.6.1 (A:6-324) Lac 5.9 6.2E+02 0.045 20.0 9.0 19 207-225 43-61 (319)
9 d1pbya5 b.61.4.1 (A:166-273) Q 5.8 4.9E+02 0.035 18.7 8.1 31 241-271 41-71 (108)
10 d2e74g1 f.23.26.1 (G:9-35) Pet 5.7 2.5E+02 0.018 15.2 2.9 20 111-130 5-24 (27)
No 1
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.16 E-value=2.7 Score=29.94 Aligned_cols=46 Identities=17% Similarity=0.350 Sum_probs=25.7
Q ss_pred eeEEEEEEcCCceEEEEEE-eeeeeeeEE-EEEcCCC-EEEEEEECCeE
Q 019932 251 DGYGIESWARGSRYKGQYR-QGLRHGYGV-YRFYTGD-SYAGQWCNGQS 296 (334)
Q Consensus 251 ~G~G~~~~~nG~~YeG~fk-ng~~~G~G~-~y~~nG~-~yeG~~knG~~ 296 (334)
||.-.+|+|||--..|+.. +|.+.|.-+ |.|||+. .+.|.|.+|.+
T Consensus 1 ~G~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dgem 49 (78)
T d2f69a1 1 HGVCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGEM 49 (78)
T ss_dssp CCCEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTEE
T ss_pred CceeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccce
Confidence 3555666677665555543 344555544 3456665 46666666554
No 2
>d2f69a1 b.76.2.1 (A:116-193) Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.08 E-value=6.4 Score=27.92 Aligned_cols=43 Identities=26% Similarity=0.495 Sum_probs=24.6
Q ss_pred eEEEEecCCCEEEEEE-ECCEEeeeEE-EEEccCc-EEEEEEECCE
Q 019932 207 EGVEFYSNGDFYEGEF-HKGKSNGSGV-YNFFVNG-RYEGEWIDGK 249 (334)
Q Consensus 207 ~G~~~y~nG~~YeG~f-~nGk~~G~G~-~~~~~G~-~YeG~wknGk 249 (334)
..-++|+||..-.|+. .+|.+.|.-+ |.|+|+. .+-|.|.+|.
T Consensus 3 ~Cw~y~pdGGslvG~vne~gEmtGd~IAYvYPD~~talyGsF~dge 48 (78)
T d2f69a1 3 VCWIYYPDGGSLVGEVNEDGEMTGEKIAYVYPDERTALYGKFIDGE 48 (78)
T ss_dssp CEEEECTTSCEEEECCCTTSCCCEEEEEEECTTSSEEEEEEEETTE
T ss_pred eeEEEeCCCCEEEeeecCCCccccceEEEEcCCCeEEEEEEeeccc
Confidence 3445666666666665 3566666553 4466665 3566666554
No 3
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.37 E-value=1.4e+02 Score=19.43 Aligned_cols=12 Identities=25% Similarity=0.864 Sum_probs=4.9
Q ss_pred EcCCceEEEEEE
Q 019932 258 WARGSRYKGQYR 269 (334)
Q Consensus 258 ~~nG~~YeG~fk 269 (334)
|+||..|...|.
T Consensus 12 W~DG~~y~A~f~ 23 (56)
T d2qqra2 12 WTDGQVYGAKFV 23 (56)
T ss_dssp CTTSCEEEEEEE
T ss_pred cCCCCEEEEEEE
Confidence 344444444333
No 4
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=9.42 E-value=2.4e+02 Score=21.91 Aligned_cols=62 Identities=16% Similarity=0.125 Sum_probs=31.0
Q ss_pred EEEEEEcCCceEEEEEEeeeeeeeEEEEEcCCCEEEEEEECCeEeeeEEEEEcCCCEEEEEEeCCe
Q 019932 253 YGIESWARGSRYKGQYRQGLRHGYGVYRFYTGDSYAGQWCNGQSHGIGVQTCADGSSYVGEFKCGV 318 (334)
Q Consensus 253 ~G~~~~~nG~~YeG~fkng~~~G~G~~y~~nG~~yeG~~knG~~~G~G~~~~~dG~~yeG~fknGk 318 (334)
.|+.+-++|..|...+.++.. ..+.+++....-.-..+...=.|+.+.++|.+|...|.++.
T Consensus 185 ~gi~~d~~g~l~vsd~~~~~i----~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~r 246 (260)
T d1rwia_ 185 WGIAVDEAGTVYVTEHNTNQV----VKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR 246 (260)
T ss_dssp EEEEECTTCCEEEEETTTTEE----EEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTE
T ss_pred ccceeeeeeeeeeeecCCCEE----EEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCE
Confidence 455556777777766654421 11233443211111111112235556778888888777654
No 5
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=7.63 E-value=1.2e+02 Score=24.22 Aligned_cols=60 Identities=12% Similarity=0.220 Sum_probs=0.0
Q ss_pred cccccccCccccccceeehhhhHHHHHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHHhhhh
Q 019932 90 FHFQRRTGSGRFVVPVIAMASLSFFTLISLFLLVYFLNLKREEIPTSENLLLALIFIAITLFLAN 154 (334)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~~~~~~~t~~~lLl~lif~~~~l~f~~ 154 (334)
|-+|+.+|+ |+.+.+.+++++..+.+.+-=.||-.-.. +|.....+.+.++++.+..+..
T Consensus 23 f~lp~~~~~-r~~l~it~lLs~~vf~~~v~~~lP~tS~~----vPli~~y~~~~~~~v~~s~~~t 82 (260)
T d1oedc_ 23 FYLPAESGE-KMSTAISVLLAQAVFLLLTSQRLPETALA----VPLIGKYLMFIMSLVTGVIVNC 82 (260)
T ss_dssp HHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SCCCTHHHHHHHHHHHHHHHHH
T ss_pred eeeCCCCCC-cEEeeHHHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHHHHHHHHH
No 6
>d2psba1 c.153.1.1 (A:13-308) Uncharacterized protein YerB {Bacillus subtilis [TaxId: 1423]}
Probab=7.04 E-value=1.7e+02 Score=24.65 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=6.9
Q ss_pred EEcCCCEEEEEEE
Q 019932 280 RFYTGDSYAGQWC 292 (334)
Q Consensus 280 y~~nG~~yeG~~k 292 (334)
++.||..+++.|+
T Consensus 247 vl~dG~~~~~tW~ 259 (296)
T d2psba1 247 LFQHGNVIETDWK 259 (296)
T ss_dssp EEETTEEEEEEEE
T ss_pred EEeCCEEEEEEEE
Confidence 3445555555554
No 7
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.28 E-value=79 Score=26.42 Aligned_cols=12 Identities=17% Similarity=0.141 Sum_probs=8.5
Q ss_pred cccCccccccce
Q 019932 94 RRTGSGRFVVPV 105 (334)
Q Consensus 94 ~~~~~~~~~~~~ 105 (334)
.+-|.-||.+|-
T Consensus 148 ekVGNfriEPPG 159 (230)
T d1k4ta3 148 ERIANFKIEPPG 159 (230)
T ss_dssp EEBSCCBCCCCE
T ss_pred EEeccccccCCc
Confidence 456888888863
No 8
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=5.89 E-value=6.2e+02 Score=20.00 Aligned_cols=19 Identities=26% Similarity=0.623 Sum_probs=11.1
Q ss_pred eEEEEecCCCEEEEEEECC
Q 019932 207 EGVEFYSNGDFYEGEFHKG 225 (334)
Q Consensus 207 ~G~~~y~nG~~YeG~f~nG 225 (334)
+|..+-++|.+|.-...++
T Consensus 43 EG~~~D~~G~Ly~~D~~~g 61 (319)
T d2dg1a1 43 EGLNFDRQGQLFLLDVFEG 61 (319)
T ss_dssp EEEEECTTSCEEEEETTTC
T ss_pred EeCEECCCCCEEEEECCCC
Confidence 4566667777775444333
No 9
>d1pbya5 b.61.4.1 (A:166-273) Quinohemoprotein amine dehydrogenase A chain, domain 3 {Paracoccus denitrificans [TaxId: 266]}
Probab=5.84 E-value=4.9e+02 Score=18.73 Aligned_cols=31 Identities=13% Similarity=0.224 Sum_probs=13.7
Q ss_pred EEEEEECCEEeeEEEEEEcCCceEEEEEEee
Q 019932 241 YEGEWIDGKYDGYGIESWARGSRYKGQYRQG 271 (334)
Q Consensus 241 YeG~wknGk~~G~G~~~~~nG~~YeG~fkng 271 (334)
+++.|.||...+.|.-..-+|-...++.+-|
T Consensus 41 ~~~~yadGs~~~~G~a~vytgyEWRas~~vg 71 (108)
T d1pbya5 41 MTLDFADGSRSFSGTGRILGAGEWRATLSDG 71 (108)
T ss_dssp EEEECSSCEEEEEEEEEEETTTEEEEEEEET
T ss_pred EEEEEcCCcccccceEEEEeccEEEEEEeeC
Confidence 3455555544444443333443444444433
No 10
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=5.74 E-value=2.5e+02 Score=15.18 Aligned_cols=20 Identities=35% Similarity=0.366 Sum_probs=8.4
Q ss_pred hHHHHHHHHHHHHHhhhccc
Q 019932 111 LSFFTLISLFLLVYFLNLKR 130 (334)
Q Consensus 111 ~~f~~~~~~~~l~~~~~~~~ 130 (334)
+++.++.-+|+-.|-.++++
T Consensus 5 li~~tl~glf~aayqqykrp 24 (27)
T d2e74g1 5 LVFATLGGLFYAAYQQYKRP 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHTTSC
T ss_pred ehHHHHHHHHHHHHHHhcCC
Confidence 44444444444334444433
Done!