BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019933
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GPD|G Chain G, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|1GPD|R Chain R, Studies Of Asymmetry In The Three-Dimensional Structure Of
Lobster D- Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 334
Score = 271 bits (692), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHGVFKG + +
Sbjct: 2 SKIGINGFGRIGRLVLRAALSCGAQVVAV-NDPFIALEYMVYMFKYDSTHGVFKGEVKM- 59
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKVVIS
Sbjct: 60 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVIS 119
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 120 APSADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA+QNIIPSSTGAAK
Sbjct: 180 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAK 212
>pdb|4GPD|1 Chain 1, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|2 Chain 2, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|3 Chain 3, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
pdb|4GPD|4 Chain 4, The Structure Of Lobster Apo-D-Glyceraldehyde-3-Phosphate
Dehydrogenase At 3.0 Angstroms Resolution
Length = 333
Score = 271 bits (692), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHGVFKG + +
Sbjct: 1 SKIGINGFGRIGRLVLRAALSCGAQVVAV-NDPFIALEYMVYMFKYDSTHGVFKGEVKM- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKVVIS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVVIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMTVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA+QNIIPSSTGAAK
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAK 211
>pdb|1IHX|A Chain A, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|B Chain B, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|C Chain C, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHX|D Chain D, Crystal Structure Of Two D-Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes: A Case Of Asymmetry
pdb|1IHY|A Chain A, Gapdh Complexed With Adp-Ribose
pdb|1IHY|B Chain B, Gapdh Complexed With Adp-Ribose
pdb|1IHY|C Chain C, Gapdh Complexed With Adp-Ribose
pdb|1IHY|D Chain D, Gapdh Complexed With Adp-Ribose
Length = 333
Score = 270 bits (691), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG + V
Sbjct: 1 SKIGINGFGRIGRLVLRTALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKV- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA+QNIIPSSTGAAK
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAK 211
>pdb|1J0X|O Chain O, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|P Chain P, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|Q Chain Q, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
pdb|1J0X|R Chain R, Crystal Structure Of The Rabbit Muscle Glyceraldehyde-3-
Phosphate Dehydrogenase (Gapdh)
Length = 332
Score = 269 bits (688), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 153/212 (72%), Gaps = 1/212 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+ +
Sbjct: 2 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKA-E 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L INGK I +F +RDPA I WGD G +YVVES+GVFTT+ KA AH+KGGAK+V+ISA
Sbjct: 61 NGKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISA 120
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PSADAPMFV+GVN + Y ++ IVSNAS TTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 PSADAPMFVMGVNHEKYDNSLKIVSNASXTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 180
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS K WR GRGA+QNIIP+STGAAK
Sbjct: 181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAK 212
>pdb|1SZJ|G Chain G, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1SZJ|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate-Dehydrogenase
From Palinurus Versicolor Refined 2.0 Angstrom
Resolution
pdb|1CRW|G Chain G, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
pdb|1CRW|R Chain R, Crystal Structure Of Apo-Glyceraldehyde-3-Phosphate
Dehydrogenase From Palinurus Versicolor At 2.0a
Resolution
Length = 333
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/213 (61%), Positives = 153/213 (71%), Gaps = 2/213 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG +
Sbjct: 1 SKIGINGFGRIGRLVLRAALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKA- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNASCTTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASCTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA+QNIIPSSTGAAK
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAK 211
>pdb|1ZNQ|O Chain O, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|P Chain P, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|R Chain R, Crsytal Structure Of Human Liver Gapdh
pdb|1ZNQ|Q Chain Q, Crsytal Structure Of Human Liver Gapdh
Length = 338
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 5 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK 64
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
++ L ING I +F +RDP++I WGD G +YVVES+GVFTT+ KA AH++GGAK+V+
Sbjct: 65 A-ENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 123
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN + Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 124 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 183
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS K WR GRGA QNIIP+STGAAK
Sbjct: 184 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAK 218
>pdb|1U8F|O Chain O, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|P Chain P, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|Q Chain Q, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
pdb|1U8F|R Chain R, Crystal Structure Of Human Placental Glyceraldehyde-3-
Phosphate Dehydrogenase At 1.75 Resolution
Length = 335
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG+NGFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVK 61
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
++ L ING I +F +RDP++I WGD G +YVVES+GVFTT+ KA AH++GGAK+V+
Sbjct: 62 A-ENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 120
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN + Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 ISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHA 180
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS K WR GRGA QNIIP+STGAAK
Sbjct: 181 ITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAK 215
>pdb|3GPD|R Chain R, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
pdb|3GPD|G Chain G, Twinning In Crystals Of Human Skeletal Muscle
D-Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 334
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 152/215 (70%), Gaps = 1/215 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN 147
G KVG++GFGRIGRL NDPFID YM YMF+YDSTHG F GT+
Sbjct: 1 GKVKVGVDGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVK 60
Query: 148 VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV 207
+D L I+GK I +F +RDP I WGD G YVVES+GVFTT+ KA AH+KGGAK++V
Sbjct: 61 A-EDGKLVIDGKAITIFQERDPENIKWGDAGTAYVVESTGVFTTMEKAGAHLKGGAKRIV 119
Query: 208 ISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
ISAPSADAPMFV+GVN Y ++ I+SNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 120 ISAPSADAPMFVMGVNHFKYANSLKIISNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHA 179
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D PS K WRGGRGA+QN+IP+STGAAK
Sbjct: 180 ITATQKTVDSPSGKLWRGGRGAAQNLIPASTGAAK 214
>pdb|1DSS|G Chain G, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
pdb|1DSS|R Chain R, Structure Of Active-Site Carboxymethylated
D-Glyceraldehyde-3- Phosphate Dehydrogenase From
Palinurus Versicolor
Length = 333
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 131/213 (61%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
+K+GINGFGRIGRL NDPFI +YM YMFKYDSTHG+FKG +
Sbjct: 1 SKIGINGFGRIGRLVLRAALEMGAQVVAV-NDPFIALEYMVYMFKYDSTHGMFKGEVKA- 58
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
+D L ++GK I VF++ P IPW G +Y+VES+GVFTTI KASAH KGGAKKV+IS
Sbjct: 59 EDGALVVDGKKITVFNEMKPENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIIS 118
Query: 210 APSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
APSADAPMFV GVN + Y +M +VSNAS TTNCLAP+AKV+HE F I+EGLM
Sbjct: 119 APSADAPMFVCGVNLEKYSKDMKVVSNASXTTNCLAPVAKVLHENFEIVEGLMTTVHAVT 178
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA+QNIIPSSTGAAK
Sbjct: 179 ATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAK 211
>pdb|3E5R|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E5R|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3V1Y|O Chain O, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|A Chain A, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|B Chain B, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
pdb|3V1Y|C Chain C, Crystal Structures Of Glyceraldehyde-3-Phosphate
Dehydrogenase Complexes With Nad
Length = 337
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 149/216 (68%), Gaps = 1/216 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-I 146
G K+GINGFGRIGRL NDPFI YM YMFKYD+ HG +K + I
Sbjct: 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDI 61
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
+ D TL + K + VF R+P EIPW + G +YVVES+GVFT KA+AH+KGGAKKV
Sbjct: 62 KIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKV 121
Query: 207 VISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
VISAPS DAPMFV GVNE Y +++IVSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 122 VISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVH 181
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGR AS NIIPSSTGAAK
Sbjct: 182 AITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAK 217
>pdb|3E6A|O Chain O, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|A Chain A, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|B Chain B, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
pdb|3E6A|C Chain C, Crystal Structure And Functional Analysis Of
Glyceraldehyde- 3-Phosphate Dehydrogenase From Oryza
Sativa
Length = 336
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 149/216 (68%), Gaps = 1/216 (0%)
Query: 88 GNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT-I 146
G K+GINGFGRIGRL NDPFI YM YMFKYD+ HG +K + I
Sbjct: 1 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDI 60
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
+ D TL + K + VF R+P EIPW + G +YVVES+GVFT KA+AH+KGGAKKV
Sbjct: 61 KIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKV 120
Query: 207 VISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
VISAPS DAPMFV GVNE Y +++IVSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 121 VISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVH 180
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGR AS NIIPSSTGAAK
Sbjct: 181 AITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAK 216
>pdb|2VYN|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|D Chain D, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 334
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 149/219 (68%), Gaps = 15/219 (6%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIN--- 147
KVGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KGT+
Sbjct: 3 KVGINGFGRIGRLVLRVCMEKGVRVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGTVEHKN 61
Query: 148 ---VVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204
VVD+ LEIN VF ++P EIPW G YVVE++GV+ +I AS H+ GA+
Sbjct: 62 GRLVVDN--LEIN-----VFQXKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGAR 114
Query: 205 KVVISAPSADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMX 263
+V+++APS DAPM V+GVNEK Y P +M +VSNAS TTNCLAPLAKV+HE FGI+EGLM
Sbjct: 115 RVIVTAPSPDAPMLVMGVNEKDYNPGSMTVVSNASXTTNCLAPLAKVIHERFGIVEGLMT 174
Query: 264 XXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGA QNIIPSSTGAAK
Sbjct: 175 TVHAYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAK 213
>pdb|3H9E|A Chain A, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3H9E|B Chain B, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3- Phosphate Dehydrogenase (Gapds)
Complex With Nad And Phosphate
pdb|3PFW|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3PFW|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad, A Binary Form
pdb|3H9E|O Chain O, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
pdb|3H9E|P Chain P, Crystal Structure Of Human Sperm-Specific
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapds) Complex
With Nad And Phosphate
Length = 346
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 145/212 (68%), Gaps = 3/212 (1%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
VGINGFGRIGRL NDPFID +YM YMFKYDSTHG +KG++ +
Sbjct: 10 VGINGFGRIGRLVLRACMEKGVKVVAV-NDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RN 67
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L ++ I V+ ++P +IPW G YVVES+GV+ +I AS H+ GA++VVISAP
Sbjct: 68 GQLVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127
Query: 212 SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
S DAPMFV+GVNE Y P +MNIVSNASCTTNCLAPLAKV+HE FGI+EGLM
Sbjct: 128 SPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTA 187
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS K WR GRGA QNIIP+STGAAK
Sbjct: 188 TQKTVDGPSRKAWRDGRGAHQNIIPASTGAAK 219
>pdb|2I5P|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
pdb|2I5P|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Isoform 1 From K. Marxianus
Length = 342
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 141/211 (66%), Gaps = 2/211 (0%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+ INGFGRIGRL NDPFI Y AYMFKYDSTHG +KG ++ D
Sbjct: 17 IAINGFGRIGRLVLRIALERKNIDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSH-DG 75
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
S L INGK + VF ++DPA +PWG GVD V+S+GVF + A H+ GAKKVVI+AP
Sbjct: 76 SNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAP 135
Query: 212 SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXXX 271
S APMFVVGVNE Y IVSNASCTTNCLAP+AK++++EFGI EGLM
Sbjct: 136 SKTAPMFVVGVNEDKYNGE-KIVSNASCTTNCLAPIAKIINDEFGIEEGLMTTVHSITAT 194
Query: 272 XXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGR AS NIIPSSTGAAK
Sbjct: 195 QKTVDGPSHKDWRGGRTASGNIIPSSTGAAK 225
>pdb|3CPS|A Chain A, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
pdb|3CPS|B Chain B, Crystal Structure Of Cryptosporidium Parvum
Glyceraldehyde-3-Phosphate Dehydrogenase
Length = 354
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 20 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 78
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 79 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNASCTTNCLAPLAK+++++FGI+EGLM
Sbjct: 139 PKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 198
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 199 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAK 233
>pdb|1VSU|A Chain A, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|B Chain B, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|C Chain C, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSU|D Chain D, Crystal Structure Of Apo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|A Chain A, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|B Chain B, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|C Chain C, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
pdb|1VSV|D Chain D, Crystal Structure Of Holo-Glyceraldehyde 3-Phosphate
Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 25 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 83
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 84 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 143
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNASCTTNCLAPLAK+++++FGI+EGLM
Sbjct: 144 PKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAK 238
>pdb|3PYM|A Chain A, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
pdb|3PYM|B Chain B, Structure Of Gapdh 3 From S.Cerevisiae At 2.0 A Resolution
Length = 332
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 142/212 (66%), Gaps = 1/212 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
+V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ D
Sbjct: 3 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-D 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D + ++GK I + +RDPA +PWG VD ++S+GVF + A H+ GAKKVVI+A
Sbjct: 62 DKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 121
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PS+ APMFV+GVNE+ Y ++ IVSNASCTTNCLAPLAKV+++ FGI EGLM
Sbjct: 122 PSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTA 181
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGR AS NIIPSSTGAAK
Sbjct: 182 TQKTVDGPSHKDWRGGRTASGNIIPSSTGAAK 213
>pdb|4IQ8|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase 3 From Saccharomyces Cerevisiae
Length = 340
Score = 240 bits (612), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 142/212 (66%), Gaps = 1/212 (0%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
+V INGFGRIGRL NDPFI Y AYMFKYDSTHG + G ++ D
Sbjct: 11 RVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-D 69
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D + ++GK I + +RDPA +PWG VD ++S+GVF + A H+ GAKKVVI+A
Sbjct: 70 DKHIIVDGKKIATYQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITA 129
Query: 211 PSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXXX 270
PS+ APMFV+GVNE+ Y ++ IVSNASCTTNCLAPLAKV+++ FGI EGLM
Sbjct: 130 PSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTA 189
Query: 271 XXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGR AS NIIPSSTGAAK
Sbjct: 190 TQKTVDGPSHKDWRGGRTASGNIIPSSTGAAK 221
>pdb|3CIF|A Chain A, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|B Chain B, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|C Chain C, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
pdb|3CIF|D Chain D, Crystal Structure Of C153s Mutant Glyceraldehyde
3-Phosphate Dehydrogenase From Cryptosporidium Parvum
Length = 359
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 92 VGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD 151
+GINGFGRIGRL NDPF+D +YMAY+ KYDS HG F GT+ V
Sbjct: 25 LGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SG 83
Query: 152 STLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211
L INGK++KVF +DPAEIPWG G V ES+GVFTT KAS H+KGGAKKV+ISAP
Sbjct: 84 KDLCINGKVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 143
Query: 212 SAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
D PM+V+GVN Y P+ N++SNAS TTNCLAPLAK+++++FGI+EGLM
Sbjct: 144 PKDNVPMYVMGVNNTEYDPSKFNVISNASSTTNCLAPLAKIINDKFGIVEGLMTTVHSLT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAK 238
>pdb|1GAE|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAE|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
Length = 330
Score = 231 bits (588), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 141/213 (66%), Gaps = 4/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 121 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGASQNIIPSSTGAAK
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK 212
>pdb|1GAD|O Chain O, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1GAD|P Chain P, Comparison Of The Structures Of Wild Type And A N313t
Mutant Of Escherichia Coli Glyceraldehyde 3-Phosphate
Dehydrogenases: Implication For Nad Binding And
Cooperativity
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor- Induced Conformational
Changes
Length = 330
Score = 231 bits (588), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 141/213 (66%), Gaps = 4/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 121 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGASQNIIPSSTGAAK
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK 212
>pdb|1S7C|A Chain A, Crystal Structure Of Mes Buffer Bound Form Of
Glyceraldehyde 3- Phosphate Dehydrogenase From
Escherichia Coli
Length = 331
Score = 231 bits (588), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 141/213 (66%), Gaps = 4/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 62 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 121
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 122 PSKDNTPMFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATT 180
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGASQNIIPSSTGAAK
Sbjct: 181 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK 213
>pdb|2VYN|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYN|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|A Chain A, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|B Chain B, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
pdb|2VYV|C Chain C, Structure Of E.Coli Gapdh Rat Sperm Gapdh Heterotetramer
Length = 331
Score = 227 bits (578), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 140/213 (65%), Gaps = 4/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA YMAYM KYDSTHG F GT+ V
Sbjct: 4 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRFDGTVEV-K 61
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV++
Sbjct: 62 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTG 121
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D PMFV G N Y +IVSNAS TTNCLAPLAKV+++ FGI+EGLM
Sbjct: 122 PSKDNTPMFVKGANFDKY-AGQDIVSNASXTTNCLAPLAKVINDNFGIIEGLMTTVHATT 180
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGASQNIIPSSTGAAK
Sbjct: 181 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK 213
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 139/215 (64%), Gaps = 4/215 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
K+GINGFGRIGRL NDPF+ YM Y+ +YDS HG + G ++
Sbjct: 25 KLGINGFGRIGRLVFRAAMERGDVEVLAINDPFMSLDYMVYLLRYDSVHGHYPGEVSH-K 83
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L + GK + VF++++P IPWG GV Y+ ES+G+F T KA AH+ GAKKV++SA
Sbjct: 84 DGKLIVGGKAVTVFNEKEPTAIPWGQAGVHYICESTGIFLTKEKAQAHLTNGAKKVIMSA 143
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P D PMFV+GVN YK + IVSNASCTTNCLAPLAK+VH++FGI+EGLM
Sbjct: 144 PPKDDTPMFVMGVNNDQYKSSDVIVSNASCTTNCLAPLAKIVHDKFGIVEGLMTTVHAMT 203
Query: 270 XXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 204 ANQLTVDGPSKGGKDWRAGRSAGVNIIPASTGAAK 238
>pdb|1DC4|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC4|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR+ ND +DA Y AY KYDSTHG F GT+ V
Sbjct: 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYXAYXLKYDSTHGRFDGTVEV-K 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L +NGK I+V ++RDPA + W + GVD V E++G+F T A H+ GAKKVV +
Sbjct: 61 DGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVXTG 120
Query: 211 PSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
PS D P FV G N Y +IVSNASCTTNCLAPLAKV+++ FGI+EGL
Sbjct: 121 PSKDNTPXFVKGANFDKY-AGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLXTTVHATT 179
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWRGGRGASQNIIPSSTGAAK
Sbjct: 180 ATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAK 212
>pdb|2B4R|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4R|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|O Chain O, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|P Chain P, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|Q Chain Q, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
pdb|2B4T|R Chain R, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Plasmodium Falciparum At 2.25
Angstrom Resolution Reveals Intriguing Extra Electron
Density In The Active Site
Length = 345
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 138/216 (63%), Gaps = 4/216 (1%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
TK+GINGFGRIGRL NDPF+D ++ Y+ KYDS HG F +
Sbjct: 12 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA 71
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
D L I K + VF+++DP++IPWG VD V ES+GVF T AS+H+KGGAKKV++S
Sbjct: 72 DGFLL-IGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 130
Query: 210 AP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
AP D P++V+G+N Y IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 131 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 190
Query: 269 XXXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 191 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAK 226
>pdb|1YWG|O Chain O, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|P Chain P, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|Q Chain Q, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
pdb|1YWG|R Chain R, The Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase
From Plasmodium Falciparum
Length = 337
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 138/216 (63%), Gaps = 4/216 (1%)
Query: 90 TKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVV 149
TK+GINGFGRIGRL NDPF+D ++ Y+ KYDS HG F +
Sbjct: 4 TKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHA 63
Query: 150 DDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209
D L I K + VF+++DP++IPWG VD V ES+GVF T AS+H+KGGAKKV++S
Sbjct: 64 DGFLL-IGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 122
Query: 210 AP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
AP D P++V+G+N Y IVSNASCTTNCLAPLAKV+++ FGI+EGLM
Sbjct: 123 APPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAS 182
Query: 269 XXXXXXXDGPSM--KDWRGGRGASQNIIPSSTGAAK 302
DGPS KDWR GR A NIIP+STGAAK
Sbjct: 183 TANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAK 218
>pdb|2EP7|A Chain A, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
pdb|2EP7|B Chain B, Structural Study Of Project Id Aq_1065 From Aquifex
Aeolicus Vf5
Length = 342
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 143/214 (66%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DAK++A++ KYDS HG+FKG++ D
Sbjct: 4 KVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFKGSVEAKD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
DS + ++GK IKVF+++DP++IPWGD GVD V+E++GVF AS H++GGAKKV+I+A
Sbjct: 63 DSIV-VDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITA 121
Query: 211 PSADAPMFVV-GVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + VV GVNE+ Y P NI+SNASCTTNCLAP KV++E FG+ +G M
Sbjct: 122 PAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAY 181
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD+R R A+ NI+P++TGAAK
Sbjct: 182 TNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAK 214
>pdb|2X0N|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|O Chain O, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|P Chain P, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|Q Chain Q, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
pdb|2X0N|R Chain R, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Brucei Determined From
Laue Data
Length = 359
Score = 203 bits (517), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/227 (49%), Positives = 141/227 (62%), Gaps = 15/227 (6%)
Query: 91 KVGINGFGRIGRLXXXXX----XXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY KYDS HG FK ++
Sbjct: 4 KVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSV 63
Query: 147 N-------VVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+ V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT + A H
Sbjct: 64 STTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A FV+GVN Y P ++VSNASCTTNCLAPL V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTFVMGVNHNNYNPREQHVVSNASCTTNCLAPLVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAK
Sbjct: 184 GISTGLMTTVHSYTATQKTVDGVSVKDWRGGRAAALNIIPSTTGAAK 230
>pdb|1K3T|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1K3T|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi Complexed With
Chalepin, A Coumarin Derivative Inhibitor
pdb|1ML3|A Chain A, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|B Chain B, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|C Chain C, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1ML3|D Chain D, Evidences For A Flip-Flop Catalytic Mechanism Of
Trypanosoma Cruzi Glyceraldehyde-3-Phosphate
Dehydrogenase, From Its Crystal Structure In Complex
With Reacted Irreversible Inhibitor
2-(2-Phosphono-Ethyl)-Acrylic Acid 4-Nitro-Phenyl Ester
pdb|1QXS|C Chain C, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|D Chain D, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|A Chain A, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|1QXS|B Chain B, Crystal Structure Of Trypanosoma Cruzi Glyceraldehyde-3-
Phosphate Dehydrogenase Complexed With An Analogue Of
1,3- Bisphospho-D-Glyceric Acid
pdb|3DMT|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3DMT|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
pdb|3IDS|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|D Chain D, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|A Chain A, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
pdb|3IDS|B Chain B, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetamide Inhibitor
Length = 359
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 140/227 (61%), Gaps = 15/227 (6%)
Query: 91 KVGINGFGRIGRLXXXXX----XXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY +YD+ HG FK +
Sbjct: 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEV 63
Query: 147 -------NVVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT A A H
Sbjct: 64 TTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A V+GVN Y P+ ++VSNASCTTNCLAP+ V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASCTTNCLAPIVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
G+ GLM DG S+KDWRGGR A+ NIIPS+TGAAK
Sbjct: 184 GVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAK 230
>pdb|1A7K|A Chain A, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|B Chain B, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|C Chain C, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1A7K|D Chain D, Glycosomal Glyceraldehyde-3-Phosphate Dehydrogenase In A
Monoclinic Crystal Form
pdb|1I32|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I32|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|A Chain A, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|B Chain B, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|C Chain C, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|D Chain D, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|E Chain E, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
pdb|1I33|F Chain F, Leishmania Mexicana Glyceraldehyde-3-Phosphate
Dehydrogenase In Complex With Inhibitors
Length = 360
Score = 194 bits (492), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFID----AKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ +D A+Y AY K+D+ HG K T+
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 147 NVVDDS-------TLEINGKLIK-VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
V S L +NG IK V ++R+PA++PWG GVDYV+ES+G+FT KA H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEE-F 255
+KGGAKKVVISAP S A V+GVN+ Y P + ++VSNASCTTNCLAP+ V+ +E F
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAK
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAK 230
>pdb|1GYP|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYP|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Leishmania Mexicana: Implications For
Structure-Based Drug Design And A New Position For The
Inorganic Phosphate Binding Site
pdb|1GYQ|A Chain A, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|B Chain B, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|C Chain C, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
pdb|1GYQ|D Chain D, Crystal Structure Of Glycosomal Glyceraldehyde From
Leishmania Mexicana In Complex With N6-Benzyl-Nad
Length = 358
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFID----AKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ +D A+Y AY K+D+ HG K T+
Sbjct: 4 KVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTV 63
Query: 147 NVVDDS-------TLEINGKLIK-VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
V S L +NG IK V ++R+PA++PWG GVDYV+ES+G+FT KA H
Sbjct: 64 EAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEE-F 255
+KGGAKKVVISAP S A V+GVN+ Y P + ++VSNASCTTNCLAP+ V+ +E F
Sbjct: 124 IKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
GI GLM DG S+KDWRGGR A+ NIIPS+TGAAK
Sbjct: 184 GIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAK 230
>pdb|3DMT|C Chain C, Structure Of Glycosomal Glyceraldehyde-3-Phosphate
Dehydrogenase From Trypanosoma Cruzi In Complex With The
Irreversible Iodoacetate Inhibitor
Length = 359
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 139/227 (61%), Gaps = 15/227 (6%)
Query: 91 KVGINGFGRIGRLXXXXX----XXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
KVGINGFGRIGR+ D DA+Y AY +YD+ HG FK +
Sbjct: 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEV 63
Query: 147 -------NVVDDSTLEING-KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAH 198
+V D TL +NG +++ V ++R+PA++PWG GV+YV+ES+G+FT A A H
Sbjct: 64 TTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGH 123
Query: 199 MKGGAKKVVISAP-SADAPMFVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKV-VHEEF 255
++GGA+KVVISAP S A V+GVN Y P+ ++VSNAS TTNCLAP+ V V E F
Sbjct: 124 LRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSNASXTTNCLAPIVHVLVKEGF 183
Query: 256 GILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
G+ GLM DG S+KDWRGGR A+ NIIPS+TGAAK
Sbjct: 184 GVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAK 230
>pdb|1GD1|O Chain O, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|P Chain P, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|Q Chain Q, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|1GD1|R Chain R, Structure Of Holo-Glyceraldehyde-3-Phosphate Dehydrogenase
From Bacillus Stearothermophilus At 1.8 Angstroms
Resolution
pdb|2GD1|O Chain O, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|P Chain P, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|Q Chain Q, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|2GD1|R Chain R, Coenzyme-Induced Conformational Changes In
Glyceraldehyde-3- Phosphate Dehydrogenase From Bacillus
Stearothermophillus
pdb|3CMC|O Chain O, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|P Chain P, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|Q Chain Q, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
pdb|3CMC|R Chain R, Thioacylenzyme Intermediate Of Bacillus Stearothermophilus
Phosphorylating Gapdh
Length = 334
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 133/214 (62%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD R R A+++IIP++TGAAK
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAK 213
>pdb|1DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|1DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|2DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|2DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Asp
32 Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 181 bits (459), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR N DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNG-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S KD R R A+++IIP++TGAAK
Sbjct: 181 TNDQRILDA-SHKDLRRARAAAESIIPTTTGAAK 213
>pdb|1NPT|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NPT|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+
pdb|1NQA|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
pdb|1NQA|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ala Complexed With Nad+ And D-
Glyceraldehyde-3-Phosphate
Length = 334
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNAS TTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASATTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD R R A+++IIP++TGAAK
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAK 213
>pdb|1NQ5|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQ5|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+
pdb|1NQO|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|A Chain A, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
pdb|1NQO|C Chain C, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Cys
149 Replaced By Ser Complexed With Nad+ And
D-Glyceraldehyde-3-Phosphate
Length = 334
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND DA +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNAS TTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASSTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD R R A+++IIP++TGAAK
Sbjct: 181 TNDQRILDLPH-KDLRRARAAAESIIPTTTGAAK 213
>pdb|1HDG|O Chain O, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
pdb|1HDG|Q Chain Q, The Crystal Structure Of Holo-glyceraldehyde-3-phosphate
Dehydrogenase From The Hyperthermophilic Bacterium
Thermotoga Maritima At 2.5 Angstroms Resolution
Length = 332
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 131/215 (60%), Gaps = 6/215 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXX--XXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGRL ND D K +A++ KYDS H F G +
Sbjct: 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAIND-LTDTKTLAHLLKYDSVHKKFPGKVEY 60
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
++S L ++GK IKVF++ DP+++PW D GVD+V+ES+GVF KA H++ GAKKV+I
Sbjct: 61 TENS-LIVDGKEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVII 119
Query: 209 SAPSADAPM-FVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP+ + V+G NE KP I+S ASCTTN +AP+ KV+HE+FGI+ G++
Sbjct: 120 TAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIVSGMLTTVHS 179
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD R R A+ NIIP++TGAAK
Sbjct: 180 YTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAK 213
>pdb|3DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|3DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nad+
pdb|4DBV|O Chain O, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|P Chain P, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|Q Chain Q, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
pdb|4DBV|R Chain R, Glyceraldehyde-3-Phosphate Dehydrogenase Mutant With Leu
33 Replaced By Thr, Thr 34 Replaced By Gly, Asp 36
Replaced By Gly, Leu 187 Replaced By Ala, And Pro 188
Replaced By Ser Complexed With Nadp+
Length = 334
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND A +A++ KYDS HG ++V +
Sbjct: 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDTG-GANTLAHLLKYDSVHGRLDAEVSV-N 60
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L +NGK I V ++RDP + WG+ GVD VVES+G FT A+ H++ GAKKV+ISA
Sbjct: 61 GNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISA 120
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + V+GVN+ Y P +++SNASCTTNCLAP AKV+HE+FGI+ G+M
Sbjct: 121 PAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSY 180
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S KD R R A+++IIP++TGAAK
Sbjct: 181 TNDQRILDA-SHKDLRRARAAAESIIPTTTGAAK 213
>pdb|4DIB|A Chain A, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|B Chain B, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|C Chain C, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|D Chain D, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|E Chain E, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|F Chain F, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|G Chain G, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
pdb|4DIB|H Chain H, The Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Bacillus Anthracis Str. Sterne
Length = 345
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 131/219 (59%), Gaps = 5/219 (2%)
Query: 86 SDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGT 145
S+ T+V INGFGRIGR+ N + ++ +A++ KYD+ HG F GT
Sbjct: 1 SNAMTRVAINGFGRIGRMVFRQAIKESAFEIVAINASY-PSETLAHLIKYDTVHGKFDGT 59
Query: 146 INVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKK 205
+ +D L ++GK+I++ + RDP E+PW D GV+ V+E++G F + KA H++ GAKK
Sbjct: 60 VEAFEDHLL-VDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKK 118
Query: 206 VVISAPSADAPM-FVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMX 263
V+++AP + + VVGVNE ++SNASCTTNCLAP+ KV+ E+FGI GLM
Sbjct: 119 VILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMT 178
Query: 264 XXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D P KD R R Q+IIP++TGAAK
Sbjct: 179 TVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAK 216
>pdb|1NBO|O Chain O, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|A Chain A, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1NBO|B Chain B, The Dual Coenzyme Specificity Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase Interpreted By
The Crystal Structure Of A4 Isoform Complexed With Nad
pdb|1RM4|O Chain O, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|A Chain A, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM4|B Chain B, Crystal Structure Of Recombinant Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|2HKI|A Chain A, Crystal Structure Of Photosynthetic
Glyceraldehyde-3-Phosphate Dehydrogenase A4 Isoform
pdb|2PKQ|P Chain P, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|R Chain R, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|S Chain S, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 337
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A NI+P+STGAAK
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAK 215
>pdb|1RM3|O Chain O, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|A Chain A, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM3|B Chain B, Crystal Structure Of Mutant T33a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDAG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A NI+P+STGAAK
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAK 215
>pdb|2PKR|O Chain O, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|R Chain R, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|P Chain P, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|Q Chain Q, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|A Chain A, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|B Chain B, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|C Chain C, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|D Chain D, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|H Chain H, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|I Chain I, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|L Chain L, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKR|M Chain M, Crystal Structure Of (A+cte)4 Chimeric Form Of
Photosyntetic Glyceraldehyde-3-Phosphate Dehydrogenase,
Complexed With Nadp
Length = 365
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A NI+P+STGAAK
Sbjct: 182 YTGDQRLLDA-SHRDLRRARAACLNIVPTSTGAAK 215
>pdb|1RM5|O Chain O, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|A Chain A, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
pdb|1RM5|B Chain B, Crystal Structure Of Mutant S188a Of Photosynthetic
Glyceraldehyde-3- Phosphate Dehydrogenase A4 Isoform,
Complexed With Nadp
Length = 337
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSILGTFDADVKT 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
DS + ++GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 AGDSAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 121
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 TAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 181
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D + +D R R A NI+P+STGAAK
Sbjct: 182 YTGDQRLLDA-AHRDLRRARAACLNIVPTSTGAAK 215
>pdb|3LC1|P Chain P, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|R Chain R, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|O Chain O, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution.
pdb|3LC1|Q Chain Q, Crystal Structure Of H178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad At
2.0 Angstrom Resolution
Length = 336
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTINAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 215
>pdb|3K73|Q Chain Q, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|O Chain O, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|P Chain P, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3K73|R Chain R, Crystal Structure Of Phosphate Bound Holo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.5 Angstrom Resolution
pdb|3L6O|Q Chain Q, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|P Chain P, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|R Chain R, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3L6O|O Chain O, Crystal Structure Of Phosphate Bound Apo
Glyceraldehyde-3-Phosphate Dehydrogenase 1 From Mrsa252
At 2.2 Angstrom Resolution
pdb|3LC2|O Chain O, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|Q Chain Q, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|R Chain R, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
pdb|3LC2|P Chain P, Crystal Structure Of Thioacyl-Glyceraldehyde-3-Phosphate
Dehydrogenase 1(Gapdh 1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252
Length = 336
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 215
>pdb|3VAZ|P Chain P, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|R Chain R, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|O Chain O, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|Q Chain Q, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|B Chain B, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
pdb|3VAZ|A Chain A, Crystal Structure Of Staphylococcal Gapdh1 In A Hexagonal
Space Group
Length = 344
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 12 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 70
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 71 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 129
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 130 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 189
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 190 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 223
>pdb|3LVF|P Chain P, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|R Chain R, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|O Chain O, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
pdb|3LVF|Q Chain Q, Crystal Structure Of Holo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicillin Resistant
Staphylococcus Aureus Mrsa252 At 1.7 Angstrom Resolution
Length = 338
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 6 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 64
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 65 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 123
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 124 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 183
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 184 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 217
>pdb|3LC7|O Chain O, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|R Chain R, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|Q Chain Q, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
pdb|3LC7|P Chain P, Crystal Structure Of Apo Glyceraldehyde-3-Phosphate
Dehydrogenase 1 (Gapdh1) From Methicllin Resistant
Staphylococcus Aureus (Mrsa252)
Length = 339
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 7 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 65
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 66 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 124
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS ASCTTN LAP+AKV++++FG++EGLM
Sbjct: 125 PATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 184
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 185 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 218
>pdb|1JN0|O Chain O, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|A Chain A, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
pdb|1JN0|B Chain B, Crystal Structure Of The Non-Regulatory A4 Isoform Of
Spinach Chloroplast Glyceraldehyde-3-Phosphate
Dehydrogenase Complexed With Nadp
Length = 335
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 121/213 (56%), Gaps = 3/213 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGR + K +++ KYDS G F +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAG 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
DS + + GK+IKV S R+P +PWGD G+D V+E +GVF A H++ GAKKV+I+A
Sbjct: 63 DSAISV-GKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P D P +VVGVNE+ Y I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 122 PGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYT 181
Query: 270 XXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A NI+P+STGAAK
Sbjct: 182 GDQRLLDA-SHRDLRRARAACLNIVPTSTGAAK 213
>pdb|3HQ4|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3HQ4|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh1)
Complexed With Nad From Staphylococcus Aureus Mrsa252 At
2.2 Angstrom Resolution
pdb|3KV3|O Chain O, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|Q Chain Q, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|R Chain R, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
pdb|3KV3|P Chain P, Crystal Structure Of C151s Mutant Of
Glyceraldehyde-3-Phosphate Dehydrogenase 1 (Gapdh 1)from
Methicillin Resistant Staphylococcus Aureus Mrsa252
Complexed With Nad And G3p
Length = 336
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 215
>pdb|3KSD|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSD|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-phosphate Dehydrogenase 1 (gapdh1) From
Staphylococcus Aureus Mrsa252 Complexed With Nad At 2.2
Angstrom Resolution
pdb|3KSZ|O Chain O, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|P Chain P, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|R Chain R, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
pdb|3KSZ|Q Chain Q, Crystal Structure Of C151s+h178n Mutant Of
Glyceraldehyde-3-Phosphate- Dehydrogenase 1 (Gapdh 1)
From Staphylococcus Aureus Mrsa252 Complexed With Nad
And G3p
Length = 336
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASSTTNSLAPVAKVLNDDFGLVEGLMTTINAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 215
>pdb|3K9Q|Q Chain Q, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|O Chain O, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|P Chain P, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3K9Q|R Chain R, Crsytal Strcuture Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 From Methicillin Resistant
Staphylococcus Aureus (Mrsa252) At 2.5 Angstrom
Resolution
pdb|3L4S|Q Chain Q, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|P Chain P, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|O Chain O, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
pdb|3L4S|R Chain R, Crystal Structure Of C151g Mutant Of Glyceraldehyde
3-Phosphate Dehydrogenase 1 (Gapdh1) From Methicillin
Resistant Staphylococcus Aureus Mrsa252 Complexed With
Nad And G3p
Length = 336
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KV INGFGRIGRL ND D +A++ KYD+ G F G + VVD
Sbjct: 4 KVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD 62
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+NGK +K FS+ D +++PW D +D V+E +G +T KA AH++ GAKKV+ISA
Sbjct: 63 -GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISA 121
Query: 211 P-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXXX 269
P + D V N + + +VS AS TTN LAP+AKV++++FG++EGLM
Sbjct: 122 PATGDLKTIVFNTNHQELDGSETVVSGASGTTNSLAPVAKVLNDDFGLVEGLMTTIHAYT 181
Query: 270 XXXXXXDGPSMK-DWRGGRGASQNIIPSSTGAAK 302
D P K D R R A++NIIP+STGAAK
Sbjct: 182 GDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAK 215
>pdb|3L0D|A Chain A, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
pdb|3L0D|B Chain B, Crystal Structure Of Glyceraldehyde-3-phosphate
Dehydrogenase From Bartonella Henselae With Bound Nad
Length = 356
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 6/217 (2%)
Query: 89 NTKVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTI 146
+ +V INGFGRIGR L ND + A++ +YDS HG F GT+
Sbjct: 23 SVRVAINGFGRIGRNILRAIIESGRQDIEVVALND-LGSVETNAHLLRYDSVHGCFPGTV 81
Query: 147 NVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206
VV D+ ++I LIKVF++RDPA++PW +D +E +G+FT KASAH+ GAK+V
Sbjct: 82 QVVGDA-IDIGSSLIKVFAERDPAQLPWKALDIDIALECTGIFTARDKASAHLDAGAKRV 140
Query: 207 VISAPSADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
++SAPS A + VV GVN + +++SNASCTTNCLAP+A+V+H GI +G M
Sbjct: 141 LVSAPSEGADLTVVYGVNHQFLSKEHHVISNASCTTNCLAPVAQVLHNTVGIEKGFMTTI 200
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D +D R A+ ++IP+STGAAK
Sbjct: 201 HSYTGDQPVLD-TMHRDLYRARAAALSMIPTSTGAAK 236
>pdb|2PKQ|O Chain O, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|Q Chain Q, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
pdb|2PKQ|T Chain T, Crystal Structure Of The Photosynthetic
A2b2-Glyceraldehyde-3- Phosphate Dehydrogenase,
Complexed With Nadp
Length = 368
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K ++ KYDS G FK + +
Sbjct: 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKSATHLLKYDSILGTFKADVKI 61
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
+D+ T I+GK IKV S RDP ++PW + G+D V+E +GVF A H++ GAKKV+I
Sbjct: 62 IDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 121
Query: 209 SAPS--ADAPMFVVGVNEKTYKPNM-NIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP+ +D P +VVGVNEK Y ++ NI+SNASCTTNCLAP KV+ EE GI++G M
Sbjct: 122 TAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A+ NI+P+STGAAK
Sbjct: 182 HSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAK 217
>pdb|3GNQ|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|E Chain E, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|F Chain F, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|G Chain G, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
pdb|3GNQ|H Chain H, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase, Type I From Burkholderia Pseudomallei
Length = 344
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 126/216 (58%), Gaps = 8/216 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V ING+GRIGR L + DAK A++ +YD+ HG F G ++V
Sbjct: 12 RVAINGYGRIGRNTLRAFYENGKKHDLEIVAINDLGDAKTNAHLTQYDTAHGKFPGEVSV 71
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L +NG I+V + R+PAE+PWG+ GVD V+E +G FT+ KASAH+KGGAKKV+I
Sbjct: 72 -DGDYLVVNGDRIRVLANRNPAELPWGELGVDVVMECTGFFTSKEKASAHLKGGAKKVII 130
Query: 209 SAP---SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
SAP DA + V GVN K ++SNASCTTNCLAPL K ++++ G+ GLM
Sbjct: 131 SAPGGKDVDATI-VYGVNHDVLKAEHTVISNASCTTNCLAPLVKPLNDKIGLETGLMTTI 189
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAA 301
D +D R R A+ + IP+ TGAA
Sbjct: 190 HAYTNDQVLTD-VYHEDLRRARSATHSQIPTKTGAA 224
>pdb|1CER|O Chain O, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|P Chain P, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|Q Chain Q, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|R Chain R, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|A Chain A, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|B Chain B, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|C Chain C, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
pdb|1CER|D Chain D, Determinants Of Enzyme Thermostability Observed In The
Molecular Structure Of Thermus Aquaticus
D-Glyceraldehyde- 3-Phosphate Dehydrogenase At 2.5
Angstroms Resolution
Length = 331
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 122/207 (58%), Gaps = 6/207 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDS + F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHSRGVEVALIND-LTDNKTLAHLLKYDSIYHRFPGEV-AYD 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L ++GK I+ + +DP EIPW + GV V+ES+GVFT KA AH++GGAKKV+I+A
Sbjct: 59 DQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA 118
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + V+GVN + Y P+ +I+SNASCTTN LAP+ KV+ E FG+ + LM
Sbjct: 119 PAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIP 295
D P KD R R A+ NIIP
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAAINIIP 204
>pdb|3HJA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
pdb|3HJA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Borrelia Burgdorferi
Length = 356
Score = 160 bits (405), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 130/226 (57%), Gaps = 10/226 (4%)
Query: 83 KSRSDGNTKVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVF 142
+++ G+ K+ INGFGRIGR ND D K +A++ KYDST GV+
Sbjct: 15 QTQGPGSMKLAINGFGRIGR-NVFKIAFERGIDIVAIND-LTDPKTLAHLLKYDSTFGVY 72
Query: 143 KGTINVVDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASA----H 198
+ D + + ++G+ IK+ ++RDP +PW G+D V+ES+GVF++ H
Sbjct: 73 NKKVESRDGAIV-VDGREIKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDH 131
Query: 199 MK-GGAKKVVISAPSADA-PMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFG 256
+ GAKKV+++ P+ D V+GVN+ ++ VSNASCTTNCLAPLAKV+HE FG
Sbjct: 132 VNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTTNCLAPLAKVLHESFG 191
Query: 257 ILEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
I +GLM D P D R R A+ +IIP+STGAAK
Sbjct: 192 IEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAK 236
>pdb|1VC2|A Chain A, Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Thermus Thermophilus Hb8
Length = 331
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 122/207 (58%), Gaps = 6/207 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDST+G F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHERGVEVALIND-LTDNKTLAHLLKYDSTYGRFPGAVGY-D 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
+ L ++GK I+ + +DP EIPW GV VVES+GVFT KA AH++ GAKKV+I+A
Sbjct: 59 EENLYVDGKAIRATAIKDPREIPWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITA 118
Query: 211 PSADAPMFVV-GVNEKTYKP-NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + + VV GVN + Y P +I+SNASCTTN LAP+ KV+ + FG+ + LM
Sbjct: 119 PAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKVLEKAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIP 295
D P KD R R A+ NIIP
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAALNIIP 204
>pdb|2G82|O Chain O, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|P Chain P, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|Q Chain Q, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|R Chain R, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|A Chain A, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|B Chain B, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|C Chain C, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
pdb|2G82|D Chain D, High Resolution Structures Of Thermus Aquaticus
Glyceraldehyde-3- Phosphate Dehydrogenase: Role Of 220's
Loop Motion In Catalysis
Length = 331
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 121/207 (58%), Gaps = 6/207 (2%)
Query: 91 KVGINGFGRIGRLXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINVVD 150
KVGINGFGRIGR ND D K +A++ KYDS + F G + D
Sbjct: 2 KVGINGFGRIGR-QVFRILHSRGVEVALIND-LTDNKTLAHLLKYDSIYHRFPGEV-AYD 58
Query: 151 DSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210
D L ++GK I+ + +DP EIPW + GV V+ES+GVFT KA AH++GGAKKV+I+A
Sbjct: 59 DQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITA 118
Query: 211 PSADAPM-FVVGVNEKTYKPN-MNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXXX 268
P+ + V+GVN + Y P+ +I+SNAS TTN LAP+ KV+ E FG+ + LM
Sbjct: 119 PAKGEDITIVMGVNHEAYDPSRHHIISNASXTTNSLAPVMKVLEEAFGVEKALMTTVHSY 178
Query: 269 XXXXXXXDGPSMKDWRGGRGASQNIIP 295
D P KD R R A+ NIIP
Sbjct: 179 TNDQRLLDLPH-KDLRRARAAAINIIP 204
>pdb|2D2I|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|B Chain B, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|O Chain O, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|P Chain P, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|Q Chain Q, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2D2I|R Chain R, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-
Phosphate Dehydrogenase From Synechococcus Sp. Complexed
With Nadp+
pdb|2DUU|A Chain A, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|B Chain B, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|O Chain O, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|P Chain P, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|Q Chain Q, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp.
pdb|2DUU|R Chain R, Crystal Structure Of Apo-Form Of Nadp-Dependent
Glyceraldehyde-3- Phosphate Dehydrogenase From
Synechococcus Sp
Length = 380
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 132/217 (60%), Gaps = 8/217 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L N+ DA+ A++ +YDS G F I+
Sbjct: 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNADISY 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D++++ +NGK +K+ R+P +PW ++ +D V+ES+GVF T AS H++ GAKKV+I
Sbjct: 63 -DENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 209 SAP--SADAPMFVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP + +V+GVN+ Y+ + ++SNASCTTNCLAP+AKV+H+ FGI++G M
Sbjct: 122 TAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A+ NI+P++TGAAK
Sbjct: 182 HSYTLDQRILDA-SHRDLRRARAAAVNIVPTTTGAAK 217
>pdb|3B1J|A Chain A, Crystal Structure Of Dehydrogenese
pdb|3B1J|B Chain B, Crystal Structure Of Dehydrogenese
pdb|3B1K|A Chain A, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|B Chain B, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|G Chain G, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B1K|H Chain H, Crystal Structure Of Dehydrogenese In The Absence Of
Copper
pdb|3B20|A Chain A, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|B Chain B, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|O Chain O, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|P Chain P, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|Q Chain Q, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
pdb|3B20|R Chain R, Crystal Structure Analysis Of Dehydrogenase Complexed With
Nad
Length = 339
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 132/217 (60%), Gaps = 8/217 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L N+ DA+ A++ +YDS G F I+
Sbjct: 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTS-DARTAAHLLEYDSVLGRFNADISY 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D++++ +NGK +K+ R+P +PW ++ +D V+ES+GVF T AS H++ GAKKV+I
Sbjct: 63 -DENSITVNGKTMKIVCDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLI 121
Query: 209 SAPSADAPM--FVVGVNEKTYK-PNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
+AP + +V+GVN+ Y+ + ++SNASCTTNCLAP+AKV+H+ FGI++G M
Sbjct: 122 TAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTNCLAPVAKVLHDNFGIIKGTMTTT 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A+ NI+P++TGAAK
Sbjct: 182 HSYTLDQRILDA-SHRDLRRARAAAVNIVPTTTGAAK 217
>pdb|1OBF|O Chain O, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution.
pdb|1OBF|P Chain P, The Crystal Structure Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Alcaligenes Xylosoxidans At 1.7
Resolution
Length = 335
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 126/215 (58%), Gaps = 6/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V ING+GRIGR L + D K A++ +YD+ HG F GT++V
Sbjct: 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSV 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
+ S + +NG I+V + R+PA++PWG VD V+E +G FTT KA AH+KGGAKKV+I
Sbjct: 63 -NGSYMVVNGDKIRVDANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121
Query: 209 SAP-SADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXX 266
SAP AD VV GVN T K ++SNAS TTNCLAPL K ++++ G+ +GLM
Sbjct: 122 SAPGGADVDATVVYGVNHGTLKSTDTVISNASXTTNCLAPLVKPLNDKLGLQDGLMTTVH 181
Query: 267 XXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAA 301
D +D R R A+ ++IP+ TGAA
Sbjct: 182 AYTNNQVLTD-VYHEDLRRARSATMSMIPTKTGAA 215
>pdb|3K2B|A Chain A, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|B Chain B, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|C Chain C, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|D Chain D, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|E Chain E, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|F Chain F, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|G Chain G, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|H Chain H, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|O Chain O, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3K2B|Q Chain Q, Crystal Structure Of Photosynthetic A4 Isoform
Glyceraldehyde-3- Phosphate Dehydrogenase Complexed With
Nad, From Arabidopsis Thaliana
pdb|3QV1|A Chain A, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|B Chain B, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|C Chain C, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|D Chain D, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|E Chain E, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3QV1|F Chain F, Crystal Structure Of The Binary Complex Of Photosyntetic
A4 Glyceraldehyde 3-Phosphate Dehydrogenase (Gapdh) With
Cp12-2, Both From Arabidopsis Thaliana.
pdb|3RVD|A Chain A, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|B Chain B, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|C Chain C, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|D Chain D, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|E Chain E, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|F Chain F, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|G Chain G, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|H Chain H, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|O Chain O, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana.
pdb|3RVD|Q Chain Q, Crystal Structure Of The Binary Complex, Obtained By
Soaking, Of Photosyntetic A4 Glyceraldehyde 3-Phosphate
Dehydrogenase (Gapdh) With Cp12-2, Both From Arabidopsis
Thaliana
Length = 337
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
KV INGFGRIGR L ND K +++ KYDST G+F +
Sbjct: 4 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
++ + ++GK+I+V S R+P+ +PW + G+D V+E +GVF A H++ GAKKV+I
Sbjct: 63 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 122
Query: 209 SAP-SADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
+AP D P +VVGVN Y + I+SNASCTTNCLAP KV+ ++FGI++G M
Sbjct: 123 TAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHS 182
Query: 268 XXXXXXXXDGPSMKDWRGGRGASQNIIPSSTGAAK 302
D S +D R R A+ NI+P+STGAAK
Sbjct: 183 YTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAK 216
>pdb|3DOC|A Chain A, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|B Chain B, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|C Chain C, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
pdb|3DOC|D Chain D, Crystal Structure Of Trka Glyceraldehyde-3-Phosphate
Dehydrogenase From Brucella Melitensis
Length = 335
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 126/219 (57%), Gaps = 14/219 (6%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR L ND + A++ +YDS HG F + V
Sbjct: 4 RVAINGFGRIGRNILRAIVESGRTDIQVVAIND-LGPVETNAHLLRYDSVHGRFPKEVEV 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D T+++ IKV + R+PAE+PW + VD +E +G+FT+ KA+ H++ GAK+V++
Sbjct: 63 AGD-TIDVGYGPIKVHAVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIV 121
Query: 209 SAPSADAPMFVV-GVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXXXX 267
SAP+ A + VV GVN + ++SNASCTTNCLAP+A+V+++ GI +G M
Sbjct: 122 SAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCLAPVAQVLNDTIGIEKGFM----- 176
Query: 268 XXXXXXXXDGPSM----KDWRGGRGASQNIIPSSTGAAK 302
D P++ KD R A+ ++IP+STGAAK
Sbjct: 177 TTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAK 215
>pdb|2XF8|A Chain A, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|B Chain B, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|C Chain C, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|D Chain D, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|E Chain E, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|F Chain F, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|G Chain G, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|H Chain H, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|I Chain I, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|J Chain J, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|K Chain K, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|L Chain L, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|M Chain M, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|N Chain N, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|O Chain O, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
pdb|2XF8|P Chain P, Structure Of The D-Erythrose-4-Phosphate Dehydrogenase
From E.Coli In Complex With A Nad Cofactor Analog (3-
Chloroacetyl Adenine Pyridine Dinucleotide) And Sulfate
Anion
Length = 338
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 3 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 62
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 63 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 121
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNASCTTNC+ P+ K++ + +GI G +
Sbjct: 122 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTI 180
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTG-AAKVKYRYPVFAD 312
D D R R ASQ+IIP T AA + +P F D
Sbjct: 181 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFND 227
>pdb|2X5J|O Chain O, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|P Chain P, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|Q Chain Q, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5J|R Chain R, Crystal Structure Of The Apoform Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 63
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 64 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 122
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNASCTTNC+ P+ K++ + +GI G +
Sbjct: 123 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTI 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTG-AAKVKYRYPVFAD 312
D D R R ASQ+IIP T AA + +P F D
Sbjct: 182 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFND 228
>pdb|2X5K|O Chain O, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|P Chain P, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|Q Chain Q, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
pdb|2X5K|R Chain R, Structure Of An Active Site Mutant Of The
D-Erythrose-4-Phosphate Dehydrogenase From E. Coli
Length = 339
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 9/228 (3%)
Query: 91 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTINV 148
+V INGFGRIGR + + DA MA++ KYD++HG F +
Sbjct: 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ 63
Query: 149 VDDSTLEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208
D L + I+V +R +PW + GVD V++ +GV+ + AH+ GAKKV+
Sbjct: 64 ERDQ-LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLF 122
Query: 209 SAPSA---DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMXXX 265
S P + DA + V GVN+ + IVSNAS TTN + P+ K++ + +GI G +
Sbjct: 123 SHPGSNDLDATV-VYGVNQDQLRAEHRIVSNASATTNSIIPVIKLLDDAYGIESGTVTTI 181
Query: 266 XXXXXXXXXXDGPSMKDWRGGRGASQNIIPSSTG-AAKVKYRYPVFAD 312
D D R R ASQ+IIP T AA + +P F D
Sbjct: 182 HSAMHDQQVIDA-YHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFND 228
>pdb|2YV3|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
pdb|2YV3|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
Length = 331
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 172 IPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKT 226
+P G VD V+ S+G + AKA +GGA +V+ SA P+ V VN +
Sbjct: 55 LPEGPLPVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREK 112
Query: 227 YKPNMNIVSNASCTTNCLAPLAKVVHEEF 255
+ I++N +CTT LA +H F
Sbjct: 113 IFQHRGIIANPNCTTAILAMALWPLHRAF 141
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 178 GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVN--EKTYKPN 230
G+D + S+G + ++K A A VI SA D P+ V VN ++
Sbjct: 63 GLDIALFSAG--SAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP 120
Query: 231 MNIVSNASCTTNCLAPLAKVVHEE 254
I++N +CTT P+ KV+H+E
Sbjct: 121 KGIIANPNCTTMAAMPVLKVLHDE 144
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 178 GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVN--EKTYKPN 230
G+D + S+G + ++K A A VI SA D P+ V VN ++
Sbjct: 81 GLDIALFSAG--SAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP 138
Query: 231 MNIVSNASCTTNCLAPLAKVVHEE 254
I++N +CTT P+ KV+H+E
Sbjct: 139 KGIIANPNCTTMAAMPVLKVLHDE 162
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 141 VFKGTINVVDDSTLEINGK-------LIKVFSKRDPAEIPWGDYGVDYVVESSGVF 189
V KG VD TLE+NG+ LI + +IP GV+Y ++S G F
Sbjct: 110 VIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIP----GVEYGIDSDGFF 161
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 141 VFKGTINVVDDSTLEINGK-------LIKVFSKRDPAEIPWGDYGVDYVVESSGVF 189
V KG VD TLE+NG+ LI + +IP GV+Y ++S G F
Sbjct: 110 VIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIP----GVEYGIDSDGFF 161
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,226,652
Number of Sequences: 62578
Number of extensions: 293159
Number of successful extensions: 852
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 521
Number of HSP's gapped (non-prelim): 82
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)