Query 019933
Match_columns 334
No_of_seqs 200 out of 1473
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 09:16:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 2.1E-84 7.1E-89 628.5 24.6 223 90-313 2-225 (332)
2 3lvf_P GAPDH 1, glyceraldehyde 100.0 8.1E-84 2.8E-88 625.4 24.8 225 87-313 2-229 (338)
3 3v1y_O PP38, glyceraldehyde-3- 100.0 7.3E-84 2.5E-88 625.7 22.2 225 89-313 3-229 (337)
4 3ids_C GAPDH, glyceraldehyde-3 100.0 1.4E-83 4.9E-88 627.6 20.2 225 88-313 1-242 (359)
5 3doc_A Glyceraldehyde 3-phosph 100.0 3.7E-83 1.3E-87 620.4 22.2 223 88-313 1-227 (335)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 1.6E-82 5.3E-87 618.2 24.2 223 89-313 7-231 (346)
7 4dib_A GAPDH, glyceraldehyde 3 100.0 8.1E-83 2.8E-87 619.6 20.9 223 89-314 4-229 (345)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 1.8E-80 6.3E-85 605.1 17.8 223 87-313 19-248 (356)
9 2ep7_A GAPDH, glyceraldehyde-3 100.0 5.5E-78 1.9E-82 586.0 20.5 223 88-313 1-226 (342)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 1.1E-77 3.7E-82 584.5 21.4 224 89-313 11-238 (345)
11 1obf_O Glyceraldehyde 3-phosph 100.0 3.7E-77 1.3E-81 578.9 24.0 221 90-313 2-228 (335)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 6.1E-71 2.1E-75 534.3 22.6 220 90-313 1-223 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 7.2E-71 2.5E-75 542.5 22.7 223 88-313 1-229 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 1.8E-69 6.3E-74 525.1 24.6 223 88-313 1-229 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 3.4E-69 1.2E-73 523.3 22.8 223 89-314 1-228 (337)
16 3cps_A Glyceraldehyde 3-phosph 100.0 9.6E-68 3.3E-72 516.1 20.8 225 88-313 16-245 (354)
17 3cmc_O GAPDH, glyceraldehyde-3 100.0 1.8E-67 6E-72 510.3 22.4 221 90-313 2-225 (334)
18 3e5r_O PP38, glyceraldehyde-3- 100.0 3.9E-67 1.3E-71 508.0 22.5 225 88-313 2-229 (337)
19 1hdg_O Holo-D-glyceraldehyde-3 100.0 9.5E-67 3.3E-71 504.8 21.4 221 90-313 1-225 (332)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.1E-66 3.9E-71 505.3 21.1 223 88-313 1-229 (339)
21 1gad_O D-glyceraldehyde-3-phos 100.0 2.5E-66 8.5E-71 501.4 21.7 220 90-312 2-223 (330)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 4.7E-66 1.6E-70 499.3 22.2 225 88-313 2-227 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 7.9E-51 2.7E-55 394.5 7.6 198 88-313 1-212 (343)
24 2yv3_A Aspartate-semialdehyde 100.0 1.3E-38 4.6E-43 306.7 15.6 191 90-311 1-224 (331)
25 2czc_A Glyceraldehyde-3-phosph 100.0 2.8E-38 9.5E-43 303.5 8.1 193 88-311 1-203 (334)
26 1cf2_P Protein (glyceraldehyde 100.0 1.7E-38 5.7E-43 306.7 6.5 192 90-310 2-204 (337)
27 2r00_A Aspartate-semialdehyde 100.0 1.5E-36 5E-41 292.8 17.0 195 89-313 3-230 (336)
28 1b7g_O Protein (glyceraldehyde 100.0 3.6E-37 1.2E-41 297.7 10.5 184 90-311 2-205 (340)
29 2hjs_A USG-1 protein homolog; 100.0 4.4E-37 1.5E-41 296.9 8.6 196 88-313 5-232 (340)
30 1t4b_A Aspartate-semialdehyde 100.0 2.4E-36 8.3E-41 295.2 1.0 194 90-309 2-255 (367)
31 2ep5_A 350AA long hypothetical 100.0 4.8E-34 1.6E-38 276.2 6.6 198 89-313 4-222 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 3.2E-32 1.1E-36 263.2 7.5 200 87-312 6-227 (354)
33 1xyg_A Putative N-acetyl-gamma 100.0 8.1E-32 2.8E-36 262.0 7.3 180 89-302 16-223 (359)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 3.8E-31 1.3E-35 255.9 6.6 187 89-311 4-215 (345)
35 4dpk_A Malonyl-COA/succinyl-CO 99.9 9.7E-28 3.3E-32 233.9 7.7 199 88-312 6-223 (359)
36 4dpl_A Malonyl-COA/succinyl-CO 99.9 9.7E-28 3.3E-32 233.9 7.2 199 88-312 6-223 (359)
37 3pwk_A Aspartate-semialdehyde 99.9 1.3E-24 4.4E-29 212.8 14.2 156 88-273 1-162 (366)
38 2nqt_A N-acetyl-gamma-glutamyl 99.9 3.9E-25 1.3E-29 215.1 6.8 180 89-295 9-215 (352)
39 3tz6_A Aspartate-semialdehyde 99.9 6.2E-24 2.1E-28 206.4 15.1 152 90-273 2-163 (344)
40 3pzr_A Aspartate-semialdehyde 99.9 2.3E-25 8E-30 218.4 4.2 153 90-271 1-166 (370)
41 3hsk_A Aspartate-semialdehyde 99.9 7.7E-25 2.6E-29 215.4 6.7 200 89-312 19-244 (381)
42 3uw3_A Aspartate-semialdehyde 99.9 3.2E-25 1.1E-29 217.9 2.0 153 89-271 4-170 (377)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 7.8E-24 2.7E-28 205.1 6.2 182 87-301 3-215 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.7 4E-19 1.4E-23 173.2 4.8 178 89-302 13-217 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.2 4.8E-06 1.7E-10 79.3 9.3 153 89-269 4-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.1 4.4E-06 1.5E-10 79.1 6.7 89 89-212 3-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 97.9 8.4E-06 2.9E-10 76.6 5.6 89 89-211 9-97 (304)
48 4hkt_A Inositol 2-dehydrogenas 97.7 6E-05 2.1E-09 70.5 7.5 95 88-212 2-96 (331)
49 3ezy_A Dehydrogenase; structur 97.7 5.2E-05 1.8E-09 71.4 7.0 97 88-212 1-97 (344)
50 3mz0_A Inositol 2-dehydrogenas 97.6 0.00013 4.4E-09 68.7 7.9 98 88-212 1-99 (344)
51 3gdo_A Uncharacterized oxidore 97.6 0.00011 3.7E-09 70.0 7.3 93 89-212 5-98 (358)
52 3kux_A Putative oxidoreductase 97.6 0.00017 5.7E-09 68.3 8.6 92 89-211 7-99 (352)
53 3e18_A Oxidoreductase; dehydro 97.6 0.00012 3.9E-09 69.9 7.3 94 89-212 5-98 (359)
54 3ijp_A DHPR, dihydrodipicolina 97.5 2.4E-05 8.2E-10 74.4 2.2 157 87-281 19-186 (288)
55 3db2_A Putative NADPH-dependen 97.5 0.00018 6E-09 68.0 8.1 97 87-212 3-99 (354)
56 3qy9_A DHPR, dihydrodipicolina 97.5 6.5E-05 2.2E-09 69.5 4.9 32 90-122 4-35 (243)
57 3i23_A Oxidoreductase, GFO/IDH 97.5 0.00018 6.1E-09 68.1 7.5 97 88-212 1-98 (349)
58 3ohs_X Trans-1,2-dihydrobenzen 97.5 0.00014 4.9E-09 68.1 6.5 97 88-212 1-99 (334)
59 4had_A Probable oxidoreductase 97.4 0.00022 7.6E-09 66.9 7.4 95 90-212 24-119 (350)
60 1h6d_A Precursor form of gluco 97.4 0.00054 1.8E-08 67.3 10.4 100 89-212 83-183 (433)
61 4f3y_A DHPR, dihydrodipicolina 97.4 0.00012 4.2E-09 68.6 5.5 155 89-281 7-171 (272)
62 3euw_A MYO-inositol dehydrogen 97.4 0.00029 9.8E-09 66.2 7.6 95 89-212 4-98 (344)
63 3f4l_A Putative oxidoreductase 97.4 0.00014 4.8E-09 68.6 5.5 96 88-212 1-98 (345)
64 3e9m_A Oxidoreductase, GFO/IDH 97.4 0.00023 7.8E-09 66.9 6.7 96 89-212 5-100 (330)
65 2ejw_A HDH, homoserine dehydro 97.4 0.00016 5.5E-09 69.7 5.7 85 89-209 3-96 (332)
66 3fhl_A Putative oxidoreductase 97.4 0.00014 5E-09 69.1 5.1 93 89-212 5-98 (362)
67 1p9l_A Dihydrodipicolinate red 97.4 0.00072 2.5E-08 62.5 9.6 33 90-122 1-34 (245)
68 3evn_A Oxidoreductase, GFO/IDH 97.3 0.00015 5E-09 68.0 4.9 96 89-212 5-100 (329)
69 3ing_A Homoserine dehydrogenas 97.3 0.00026 8.7E-09 68.0 6.6 34 89-122 4-43 (325)
70 2ho3_A Oxidoreductase, GFO/IDH 97.3 0.00061 2.1E-08 63.5 9.0 94 90-212 2-95 (325)
71 3ec7_A Putative dehydrogenase; 97.3 0.00028 9.6E-09 67.2 6.8 98 88-212 22-120 (357)
72 3e82_A Putative oxidoreductase 97.3 0.00029 9.9E-09 67.2 6.9 93 89-212 7-100 (364)
73 3uuw_A Putative oxidoreductase 97.3 0.00032 1.1E-08 64.8 7.0 93 89-212 6-99 (308)
74 3ic5_A Putative saccharopine d 97.3 0.00036 1.2E-08 54.1 6.1 98 88-210 4-101 (118)
75 3cea_A MYO-inositol 2-dehydrog 97.3 0.00053 1.8E-08 64.1 8.3 96 89-212 8-104 (346)
76 1ydw_A AX110P-like protein; st 97.3 0.00041 1.4E-08 65.7 7.6 99 89-212 6-104 (362)
77 3c8m_A Homoserine dehydrogenas 97.3 9.4E-05 3.2E-09 70.8 3.0 34 89-122 6-46 (331)
78 2dc1_A L-aspartate dehydrogena 97.3 0.00021 7.3E-09 64.1 5.0 132 90-268 1-136 (236)
79 2ixa_A Alpha-N-acetylgalactosa 97.3 0.00083 2.8E-08 65.9 9.6 102 89-212 20-124 (444)
80 1tlt_A Putative oxidoreductase 97.3 0.00051 1.8E-08 63.8 7.3 93 89-212 5-98 (319)
81 3m2t_A Probable dehydrogenase; 97.2 0.00034 1.2E-08 66.6 6.2 96 89-212 5-101 (359)
82 3rc1_A Sugar 3-ketoreductase; 97.2 0.00042 1.5E-08 65.7 6.7 95 89-212 27-122 (350)
83 3c1a_A Putative oxidoreductase 97.2 0.00056 1.9E-08 63.6 7.3 93 89-212 10-102 (315)
84 1xea_A Oxidoreductase, GFO/IDH 97.2 0.001 3.5E-08 62.0 8.8 95 88-212 1-96 (323)
85 4ew6_A D-galactose-1-dehydroge 97.2 0.0003 1E-08 66.5 5.1 88 89-212 25-114 (330)
86 4h3v_A Oxidoreductase domain p 97.1 0.00026 8.9E-09 66.3 3.8 98 87-212 3-108 (390)
87 4gqa_A NAD binding oxidoreduct 97.1 0.00051 1.7E-08 66.2 5.4 96 89-212 26-129 (412)
88 3do5_A HOM, homoserine dehydro 97.0 0.0012 4E-08 63.4 7.6 33 90-122 3-43 (327)
89 3q2i_A Dehydrogenase; rossmann 97.0 0.00098 3.4E-08 62.9 6.7 95 89-212 13-108 (354)
90 3moi_A Probable dehydrogenase; 97.0 0.00067 2.3E-08 65.1 5.4 96 88-212 1-97 (387)
91 1zh8_A Oxidoreductase; TM0312, 97.0 0.0012 4.1E-08 62.3 7.0 96 89-212 18-115 (340)
92 3mtj_A Homoserine dehydrogenas 96.9 0.0016 5.5E-08 65.2 7.5 92 89-211 10-111 (444)
93 1dih_A Dihydrodipicolinate red 96.9 0.0012 4.2E-08 61.6 6.2 99 89-211 5-104 (273)
94 4fb5_A Probable oxidoreductase 96.9 0.0013 4.5E-08 61.6 6.3 99 86-212 21-127 (393)
95 1j5p_A Aspartate dehydrogenase 96.9 0.0008 2.7E-08 62.9 4.8 128 90-270 13-148 (253)
96 1lc0_A Biliverdin reductase A; 96.8 0.0021 7.2E-08 59.7 6.9 89 89-212 7-98 (294)
97 3btv_A Galactose/lactose metab 96.6 0.0013 4.3E-08 64.7 4.1 99 89-212 20-128 (438)
98 3u3x_A Oxidoreductase; structu 96.6 0.0019 6.4E-08 61.7 5.1 95 89-212 26-121 (361)
99 3v5n_A Oxidoreductase; structu 96.6 0.0027 9.2E-08 61.8 6.2 98 89-212 37-143 (417)
100 2glx_A 1,5-anhydro-D-fructose 96.6 0.0043 1.5E-07 57.5 7.3 94 90-212 1-95 (332)
101 3dty_A Oxidoreductase, GFO/IDH 96.5 0.0027 9.1E-08 61.2 5.9 102 89-212 12-118 (398)
102 1r0k_A 1-deoxy-D-xylulose 5-ph 96.5 0.0054 1.8E-07 60.6 8.0 108 90-208 5-122 (388)
103 3ip3_A Oxidoreductase, putativ 96.5 0.00098 3.4E-08 62.6 2.6 98 88-212 1-100 (337)
104 2nvw_A Galactose/lactose metab 96.5 0.0038 1.3E-07 62.3 7.1 99 89-212 39-147 (479)
105 3upl_A Oxidoreductase; rossman 96.5 0.0029 9.9E-08 63.5 6.1 106 89-203 23-133 (446)
106 3o9z_A Lipopolysaccaride biosy 96.4 0.0034 1.2E-07 58.8 5.4 94 90-212 4-105 (312)
107 3oa2_A WBPB; oxidoreductase, s 96.2 0.0052 1.8E-07 57.7 5.4 94 90-212 4-106 (318)
108 2p2s_A Putative oxidoreductase 96.1 0.0069 2.4E-07 56.5 6.0 95 89-212 4-99 (336)
109 3oqb_A Oxidoreductase; structu 95.8 0.0073 2.5E-07 57.4 4.5 96 89-212 6-116 (383)
110 3ius_A Uncharacterized conserv 95.3 0.22 7.6E-06 44.2 12.3 34 87-121 3-36 (286)
111 2vt3_A REX, redox-sensing tran 95.2 0.039 1.3E-06 50.0 7.2 94 90-213 86-180 (215)
112 2dt5_A AT-rich DNA-binding pro 95.0 0.022 7.6E-07 51.4 4.8 93 90-212 81-174 (211)
113 3abi_A Putative uncharacterize 94.7 0.064 2.2E-06 51.0 7.4 89 89-205 16-104 (365)
114 1ebf_A Homoserine dehydrogenas 94.5 0.03 1E-06 54.2 4.7 34 89-122 4-40 (358)
115 3a06_A 1-deoxy-D-xylulose 5-ph 94.2 0.12 4.1E-06 50.9 8.3 107 90-208 4-114 (376)
116 3keo_A Redox-sensing transcrip 94.0 0.041 1.4E-06 50.0 4.2 97 90-212 85-182 (212)
117 2r6j_A Eugenol synthase 1; phe 93.9 0.087 3E-06 47.8 6.2 33 88-121 10-43 (318)
118 4gmf_A Yersiniabactin biosynth 93.7 0.31 1.1E-05 47.2 10.0 137 89-257 7-177 (372)
119 3i6i_A Putative leucoanthocyan 93.6 0.061 2.1E-06 49.7 4.7 31 90-121 11-42 (346)
120 3m2p_A UDP-N-acetylglucosamine 93.5 0.15 5E-06 46.2 7.0 33 88-121 1-34 (311)
121 3fwz_A Inner membrane protein 93.4 0.14 4.9E-06 41.7 6.2 42 87-132 5-46 (140)
122 3dqp_A Oxidoreductase YLBE; al 93.4 0.29 9.9E-06 41.9 8.4 30 91-121 2-32 (219)
123 2nu8_A Succinyl-COA ligase [AD 93.1 0.12 4.1E-06 48.3 5.8 89 89-210 7-97 (288)
124 3e48_A Putative nucleoside-dip 92.8 0.045 1.5E-06 48.9 2.4 31 91-121 2-33 (289)
125 1qyd_A Pinoresinol-lariciresin 92.5 0.22 7.6E-06 44.7 6.6 31 90-121 5-36 (313)
126 2bma_A Glutamate dehydrogenase 92.5 0.4 1.4E-05 48.5 8.9 101 90-205 253-363 (470)
127 1y81_A Conserved hypothetical 92.4 0.61 2.1E-05 38.8 8.7 85 89-211 14-102 (138)
128 3c1o_A Eugenol synthase; pheny 91.9 0.19 6.6E-06 45.5 5.5 31 90-121 5-36 (321)
129 1vm6_A DHPR, dihydrodipicolina 91.8 0.23 7.7E-06 45.8 5.8 68 90-206 13-81 (228)
130 2duw_A Putative COA-binding pr 91.7 0.66 2.3E-05 38.8 8.1 85 90-210 14-102 (145)
131 1vpd_A Tartronate semialdehyde 91.5 0.16 5.4E-06 46.1 4.4 41 87-131 3-43 (299)
132 3e8x_A Putative NAD-dependent 91.5 0.94 3.2E-05 39.1 9.2 32 89-121 21-53 (236)
133 3c24_A Putative oxidoreductase 91.2 0.22 7.5E-06 45.3 5.0 42 87-132 9-51 (286)
134 3aog_A Glutamate dehydrogenase 91.2 0.56 1.9E-05 47.0 8.3 32 90-122 236-267 (440)
135 3ff4_A Uncharacterized protein 91.0 0.55 1.9E-05 38.7 6.8 82 91-211 6-91 (122)
136 2d59_A Hypothetical protein PH 90.6 1 3.5E-05 37.5 8.2 83 90-210 23-109 (144)
137 3pp8_A Glyoxylate/hydroxypyruv 90.6 0.2 7E-06 47.5 4.3 31 90-121 140-170 (315)
138 4g2n_A D-isomer specific 2-hyd 90.5 0.22 7.6E-06 48.0 4.6 31 90-121 174-204 (345)
139 4ina_A Saccharopine dehydrogen 90.4 0.11 3.6E-06 50.6 2.3 99 90-206 2-104 (405)
140 1qyc_A Phenylcoumaran benzylic 90.4 0.4 1.4E-05 42.9 6.0 31 90-121 5-36 (308)
141 3evt_A Phosphoglycerate dehydr 90.4 0.23 7.9E-06 47.3 4.6 31 90-121 138-168 (324)
142 2pi1_A D-lactate dehydrogenase 90.3 0.23 7.7E-06 47.5 4.4 31 90-121 142-172 (334)
143 3llv_A Exopolyphosphatase-rela 90.3 0.25 8.7E-06 39.7 4.1 39 90-132 7-45 (141)
144 1gtm_A Glutamate dehydrogenase 90.3 0.25 8.6E-06 48.9 4.8 32 90-122 213-245 (419)
145 1qp8_A Formate dehydrogenase; 90.2 0.25 8.5E-06 46.5 4.5 30 90-120 125-154 (303)
146 1xdw_A NAD+-dependent (R)-2-hy 90.2 0.24 8.2E-06 47.1 4.4 31 90-121 147-177 (331)
147 3gt0_A Pyrroline-5-carboxylate 90.2 0.24 8.3E-06 44.1 4.3 42 88-133 1-46 (247)
148 3ggo_A Prephenate dehydrogenas 90.2 0.3 1E-05 45.9 5.0 43 87-133 31-75 (314)
149 3hg7_A D-isomer specific 2-hyd 90.1 0.25 8.4E-06 47.3 4.5 31 90-121 141-171 (324)
150 1lss_A TRK system potassium up 90.0 0.35 1.2E-05 38.0 4.6 31 90-121 5-35 (140)
151 3kb6_A D-lactate dehydrogenase 89.9 0.26 8.8E-06 47.1 4.5 30 90-120 142-171 (334)
152 1dxy_A D-2-hydroxyisocaproate 89.9 0.26 9E-06 46.9 4.5 30 90-120 146-175 (333)
153 2yq5_A D-isomer specific 2-hyd 89.8 0.27 9.2E-06 47.4 4.5 31 90-121 149-179 (343)
154 3r3j_A Glutamate dehydrogenase 89.7 0.62 2.1E-05 46.9 7.2 101 90-205 240-350 (456)
155 2g76_A 3-PGDH, D-3-phosphoglyc 89.7 0.28 9.7E-06 46.9 4.6 31 90-121 166-196 (335)
156 3gg9_A D-3-phosphoglycerate de 89.7 0.28 9.4E-06 47.3 4.5 31 90-121 161-191 (352)
157 1gdh_A D-glycerate dehydrogena 89.6 0.3 1E-05 46.2 4.6 31 90-121 147-177 (320)
158 1bgv_A Glutamate dehydrogenase 89.5 0.46 1.6E-05 47.7 6.0 102 90-208 231-343 (449)
159 4huj_A Uncharacterized protein 89.5 0.3 1E-05 43.0 4.2 40 89-131 23-62 (220)
160 1c1d_A L-phenylalanine dehydro 89.4 0.11 3.8E-06 50.5 1.5 31 90-122 176-206 (355)
161 3jtm_A Formate dehydrogenase, 89.4 0.28 9.5E-06 47.4 4.3 31 90-121 165-195 (351)
162 1id1_A Putative potassium chan 89.3 0.34 1.2E-05 39.7 4.3 31 90-121 4-34 (153)
163 1mx3_A CTBP1, C-terminal bindi 89.3 0.32 1.1E-05 46.8 4.6 30 90-120 169-198 (347)
164 2vns_A Metalloreductase steap3 89.3 0.32 1.1E-05 42.8 4.2 31 89-120 28-58 (215)
165 4e5n_A Thermostable phosphite 89.2 0.25 8.6E-06 47.1 3.8 31 90-121 146-176 (330)
166 4hy3_A Phosphoglycerate oxidor 89.1 0.29 1E-05 47.6 4.2 31 90-121 177-207 (365)
167 4dgs_A Dehydrogenase; structur 89.1 0.34 1.2E-05 46.6 4.6 30 90-120 172-201 (340)
168 2cuk_A Glycerate dehydrogenase 89.0 0.34 1.2E-05 45.7 4.5 31 90-121 145-175 (311)
169 3gvx_A Glycerate dehydrogenase 89.0 0.27 9.4E-06 46.2 3.8 31 90-121 123-153 (290)
170 3doj_A AT3G25530, dehydrogenas 88.9 0.42 1.4E-05 44.2 5.0 40 90-133 22-61 (310)
171 2yfq_A Padgh, NAD-GDH, NAD-spe 88.9 0.69 2.4E-05 45.9 6.8 33 90-123 213-245 (421)
172 1wwk_A Phosphoglycerate dehydr 88.8 0.36 1.2E-05 45.4 4.5 31 90-121 143-173 (307)
173 1j4a_A D-LDH, D-lactate dehydr 88.7 0.36 1.2E-05 45.8 4.5 31 90-121 147-177 (333)
174 2ekl_A D-3-phosphoglycerate de 88.4 0.39 1.3E-05 45.2 4.5 31 90-121 143-173 (313)
175 2g1u_A Hypothetical protein TM 88.4 0.55 1.9E-05 38.6 4.9 31 90-121 20-50 (155)
176 3qha_A Putative oxidoreductase 88.4 0.33 1.1E-05 44.6 3.9 32 88-120 14-45 (296)
177 3c85_A Putative glutathione-re 88.3 0.43 1.5E-05 40.1 4.3 38 90-131 40-78 (183)
178 2ew2_A 2-dehydropantoate 2-red 88.3 0.43 1.5E-05 42.9 4.5 40 89-132 3-42 (316)
179 2w2k_A D-mandelate dehydrogena 88.2 0.42 1.4E-05 45.7 4.6 31 90-121 164-195 (348)
180 3k92_A NAD-GDH, NAD-specific g 88.2 0.81 2.8E-05 45.6 6.7 33 89-122 221-253 (424)
181 3g0o_A 3-hydroxyisobutyrate de 88.0 0.45 1.6E-05 43.7 4.6 42 88-133 6-47 (303)
182 3two_A Mannitol dehydrogenase; 88.0 0.78 2.7E-05 42.7 6.2 129 90-253 178-308 (348)
183 2i76_A Hypothetical protein; N 88.0 0.15 5.1E-06 46.4 1.2 41 88-132 1-41 (276)
184 4ezb_A Uncharacterized conserv 87.9 0.52 1.8E-05 44.1 5.0 33 88-120 23-55 (317)
185 3oet_A Erythronate-4-phosphate 87.8 0.43 1.5E-05 46.8 4.5 30 90-120 120-149 (381)
186 2o4c_A Erythronate-4-phosphate 87.7 0.44 1.5E-05 46.6 4.5 30 90-120 117-146 (380)
187 3l4b_C TRKA K+ channel protien 87.7 0.37 1.3E-05 41.9 3.6 38 90-131 1-38 (218)
188 1sc6_A PGDH, D-3-phosphoglycer 87.7 0.44 1.5E-05 46.8 4.5 30 90-120 146-175 (404)
189 2gcg_A Glyoxylate reductase/hy 87.5 0.44 1.5E-05 45.0 4.2 31 90-121 156-186 (330)
190 3mw9_A GDH 1, glutamate dehydr 87.5 3.3 0.00011 42.2 10.8 31 90-121 245-275 (501)
191 3ba1_A HPPR, hydroxyphenylpyru 87.4 0.45 1.5E-05 45.4 4.3 30 90-120 165-194 (333)
192 4gbj_A 6-phosphogluconate dehy 87.4 0.45 1.6E-05 44.2 4.2 33 87-120 3-35 (297)
193 2tmg_A Protein (glutamate dehy 87.4 0.99 3.4E-05 44.8 6.8 33 90-122 210-242 (415)
194 1yb4_A Tartronic semialdehyde 87.2 0.4 1.4E-05 43.2 3.6 30 90-120 4-33 (295)
195 3cky_A 2-hydroxymethyl glutara 87.1 0.55 1.9E-05 42.5 4.5 39 89-131 4-42 (301)
196 2nac_A NAD-dependent formate d 87.1 0.46 1.6E-05 46.6 4.2 31 90-121 192-222 (393)
197 2d0i_A Dehydrogenase; structur 87.1 0.48 1.6E-05 45.0 4.2 31 90-121 147-177 (333)
198 2dbq_A Glyoxylate reductase; D 87.1 0.52 1.8E-05 44.6 4.5 31 90-121 151-181 (334)
199 1iuk_A Hypothetical protein TT 87.1 1.1 3.8E-05 37.3 6.0 86 90-211 14-103 (140)
200 3sc6_A DTDP-4-dehydrorhamnose 86.9 0.69 2.4E-05 40.9 4.9 46 87-134 3-53 (287)
201 3d4o_A Dipicolinate synthase s 86.6 0.61 2.1E-05 42.9 4.6 31 90-121 156-186 (293)
202 3b1f_A Putative prephenate deh 86.5 0.51 1.8E-05 42.6 3.9 31 90-120 7-38 (290)
203 3l6d_A Putative oxidoreductase 86.5 0.66 2.3E-05 42.9 4.8 41 89-133 9-49 (306)
204 3aoe_E Glutamate dehydrogenase 86.3 1 3.5E-05 44.8 6.2 32 90-122 219-250 (419)
205 2ahr_A Putative pyrroline carb 86.2 0.63 2.2E-05 41.3 4.3 39 90-132 4-42 (259)
206 2j6i_A Formate dehydrogenase; 86.0 0.55 1.9E-05 45.3 4.0 31 90-121 165-196 (364)
207 4dll_A 2-hydroxy-3-oxopropiona 85.9 0.71 2.4E-05 42.9 4.7 40 90-133 32-71 (320)
208 2yjz_A Metalloreductase steap4 86.0 0.15 5.1E-06 44.9 0.0 43 74-119 6-48 (201)
209 2rir_A Dipicolinate synthase, 85.8 0.7 2.4E-05 42.6 4.6 31 90-121 158-188 (300)
210 1v9l_A Glutamate dehydrogenase 85.8 1.3 4.4E-05 44.1 6.7 32 90-122 211-242 (421)
211 3dfu_A Uncharacterized protein 85.3 0.37 1.2E-05 44.2 2.3 31 90-121 7-37 (232)
212 1oi7_A Succinyl-COA synthetase 85.3 0.74 2.5E-05 43.0 4.4 86 90-208 8-94 (288)
213 3k5p_A D-3-phosphoglycerate de 85.2 0.7 2.4E-05 45.8 4.5 30 90-120 157-186 (416)
214 3d1l_A Putative NADP oxidoredu 84.9 0.97 3.3E-05 40.3 4.9 39 90-131 11-49 (266)
215 4e21_A 6-phosphogluconate dehy 84.7 0.82 2.8E-05 43.9 4.6 41 90-134 23-63 (358)
216 2h78_A Hibadh, 3-hydroxyisobut 84.5 0.87 3E-05 41.4 4.5 40 90-133 4-43 (302)
217 2hmt_A YUAA protein; RCK, KTN, 84.4 0.79 2.7E-05 36.0 3.7 31 90-121 7-37 (144)
218 1ldn_A L-lactate dehydrogenase 84.2 0.66 2.3E-05 43.5 3.6 31 89-119 6-37 (316)
219 3l9w_A Glutathione-regulated p 84.2 1.2 4E-05 43.6 5.5 39 90-132 5-43 (413)
220 3dtt_A NADP oxidoreductase; st 84.1 1 3.5E-05 40.2 4.7 31 89-120 19-49 (245)
221 3pef_A 6-phosphogluconate dehy 83.9 0.99 3.4E-05 40.9 4.6 30 90-120 2-31 (287)
222 2f1k_A Prephenate dehydrogenas 83.7 1 3.5E-05 40.3 4.5 38 91-132 2-39 (279)
223 1yqd_A Sinapyl alcohol dehydro 83.7 1 3.4E-05 42.5 4.7 93 91-209 190-282 (366)
224 2axq_A Saccharopine dehydrogen 83.5 0.92 3.2E-05 45.2 4.5 90 90-203 24-113 (467)
225 3gg2_A Sugar dehydrogenase, UD 83.5 0.96 3.3E-05 44.7 4.6 42 88-133 1-42 (450)
226 2qyt_A 2-dehydropantoate 2-red 83.4 0.88 3E-05 41.2 4.0 34 87-120 6-44 (317)
227 2g5c_A Prephenate dehydrogenas 83.4 1.1 3.7E-05 40.2 4.6 39 90-131 2-41 (281)
228 1t2d_A LDH-P, L-lactate dehydr 83.2 0.91 3.1E-05 42.8 4.1 32 90-122 5-36 (322)
229 2pv7_A T-protein [includes: ch 83.2 1.3 4.3E-05 40.8 5.0 32 88-120 20-52 (298)
230 2rcy_A Pyrroline carboxylate r 83.2 0.82 2.8E-05 40.5 3.6 23 90-112 5-27 (262)
231 2uyy_A N-PAC protein; long-cha 83.1 1.2 4.1E-05 40.8 4.8 30 90-120 31-60 (316)
232 1ygy_A PGDH, D-3-phosphoglycer 83.1 1 3.4E-05 45.5 4.6 31 90-121 143-173 (529)
233 3jv7_A ADH-A; dehydrogenase, n 83.0 4.3 0.00015 37.5 8.6 130 90-253 173-310 (345)
234 2cvz_A Dehydrogenase, 3-hydrox 82.8 0.99 3.4E-05 40.3 4.0 29 90-120 2-30 (289)
235 1bg6_A N-(1-D-carboxylethyl)-L 82.8 1.2 3.9E-05 41.1 4.6 31 89-120 4-34 (359)
236 3dhn_A NAD-dependent epimerase 82.6 1.1 3.7E-05 38.2 4.1 31 90-121 5-36 (227)
237 1jay_A Coenzyme F420H2:NADP+ o 82.6 1.4 4.7E-05 37.7 4.7 30 91-121 2-32 (212)
238 3ktd_A Prephenate dehydrogenas 82.5 1.1 3.7E-05 42.9 4.4 41 89-133 8-48 (341)
239 3ew7_A LMO0794 protein; Q8Y8U8 82.0 1.4 4.7E-05 37.1 4.4 30 91-121 2-32 (221)
240 1evy_A Glycerol-3-phosphate de 82.0 1.2 4.1E-05 41.7 4.4 41 88-132 13-54 (366)
241 1hdo_A Biliverdin IX beta redu 81.9 1.5 5.3E-05 36.2 4.6 31 90-121 4-35 (206)
242 2gf2_A Hibadh, 3-hydroxyisobut 81.7 1.1 3.9E-05 40.2 4.1 29 91-120 2-30 (296)
243 3slg_A PBGP3 protein; structur 81.6 1.1 3.9E-05 41.2 4.0 33 89-121 24-57 (372)
244 3h2s_A Putative NADH-flavin re 81.4 1.5 5E-05 37.2 4.4 30 91-121 2-32 (224)
245 1q0q_A 1-deoxy-D-xylulose 5-ph 81.3 1.3 4.5E-05 44.0 4.5 113 87-209 8-131 (406)
246 2raf_A Putative dinucleotide-b 81.3 1.5 5.1E-05 38.3 4.5 29 90-119 20-48 (209)
247 1i36_A Conserved hypothetical 81.2 1.3 4.4E-05 39.3 4.2 30 91-122 2-31 (264)
248 3gpi_A NAD-dependent epimerase 81.1 1.3 4.5E-05 39.3 4.2 31 90-121 4-34 (286)
249 3qvo_A NMRA family protein; st 81.0 1.5 5.3E-05 38.0 4.5 33 89-121 23-56 (236)
250 2yv1_A Succinyl-COA ligase [AD 81.0 3.3 0.00011 38.7 7.0 89 89-211 13-104 (294)
251 4egb_A DTDP-glucose 4,6-dehydr 81.0 1.2 4.3E-05 40.4 4.0 33 89-121 24-58 (346)
252 4fcc_A Glutamate dehydrogenase 80.9 1.4 4.7E-05 44.3 4.6 100 90-205 236-345 (450)
253 2v6b_A L-LDH, L-lactate dehydr 80.8 3.9 0.00013 37.9 7.4 30 90-119 1-31 (304)
254 3pdu_A 3-hydroxyisobutyrate de 80.7 1 3.6E-05 40.8 3.4 39 90-132 2-40 (287)
255 2gn4_A FLAA1 protein, UDP-GLCN 80.6 2.7 9.2E-05 39.0 6.3 32 90-121 22-55 (344)
256 3fpc_A NADP-dependent alcohol 80.5 6.5 0.00022 36.5 8.9 97 91-209 169-266 (352)
257 2a35_A Hypothetical protein PA 80.2 1.4 4.8E-05 37.0 3.9 33 88-120 4-38 (215)
258 4g65_A TRK system potassium up 80.2 1.6 5.4E-05 43.2 4.8 40 90-133 4-43 (461)
259 4b4o_A Epimerase family protei 80.1 1.7 5.8E-05 38.9 4.6 31 90-121 1-32 (298)
260 3d64_A Adenosylhomocysteinase; 80.1 1.5 5E-05 44.4 4.6 30 90-120 278-307 (494)
261 1z82_A Glycerol-3-phosphate de 79.7 1.7 5.8E-05 40.3 4.6 34 87-121 12-45 (335)
262 2wtb_A MFP2, fatty acid multif 79.6 2.4 8.3E-05 44.5 6.2 30 90-120 313-342 (725)
263 3tri_A Pyrroline-5-carboxylate 79.3 1.6 5.3E-05 40.0 4.1 41 89-133 3-46 (280)
264 3r6d_A NAD-dependent epimerase 79.3 2 7E-05 36.6 4.6 30 91-121 7-38 (221)
265 2yv2_A Succinyl-COA synthetase 79.2 2.6 8.7E-05 39.5 5.6 89 89-211 13-105 (297)
266 3nkl_A UDP-D-quinovosamine 4-d 79.2 2.4 8.3E-05 33.9 4.8 33 90-122 5-37 (141)
267 1ks9_A KPA reductase;, 2-dehyd 78.9 1.9 6.6E-05 38.2 4.5 30 91-121 2-31 (291)
268 3i83_A 2-dehydropantoate 2-red 78.7 1.9 6.4E-05 39.9 4.6 33 88-121 1-33 (320)
269 2wm3_A NMRA-like family domain 78.5 1.7 5.8E-05 38.8 4.0 33 89-121 5-38 (299)
270 1uuf_A YAHK, zinc-type alcohol 78.3 1.9 6.6E-05 40.7 4.6 86 91-203 197-282 (369)
271 1guz_A Malate dehydrogenase; o 78.2 4.7 0.00016 37.4 7.1 30 90-119 1-31 (310)
272 2x4g_A Nucleoside-diphosphate- 78.0 2.2 7.4E-05 38.5 4.6 31 90-121 14-45 (342)
273 3p7m_A Malate dehydrogenase; p 77.9 1.6 5.3E-05 41.4 3.8 29 90-119 6-35 (321)
274 2iz1_A 6-phosphogluconate dehy 77.9 1.8 6E-05 42.9 4.3 41 89-133 5-45 (474)
275 1v8b_A Adenosylhomocysteinase; 77.8 1.5 5.1E-05 44.3 3.8 30 90-120 258-287 (479)
276 3ego_A Probable 2-dehydropanto 77.5 2.2 7.6E-05 39.4 4.6 32 88-121 1-32 (307)
277 1np3_A Ketol-acid reductoisome 77.4 1.9 6.6E-05 40.6 4.3 31 90-121 17-47 (338)
278 3qsg_A NAD-binding phosphogluc 77.4 1.7 5.7E-05 40.3 3.8 30 90-120 25-55 (312)
279 3vps_A TUNA, NAD-dependent epi 77.1 2.2 7.6E-05 37.9 4.4 33 88-121 6-39 (321)
280 3h9u_A Adenosylhomocysteinase; 77.1 2 6.9E-05 42.9 4.5 29 90-119 212-240 (436)
281 3n58_A Adenosylhomocysteinase; 77.1 2 6.9E-05 43.3 4.5 29 90-119 248-276 (464)
282 3oj0_A Glutr, glutamyl-tRNA re 76.9 1.1 3.8E-05 36.3 2.1 36 90-129 22-57 (144)
283 1n7h_A GDP-D-mannose-4,6-dehyd 76.9 2.3 7.7E-05 39.4 4.5 34 87-121 26-60 (381)
284 2ydy_A Methionine adenosyltran 76.8 2.5 8.4E-05 37.8 4.6 32 88-120 1-33 (315)
285 1yqg_A Pyrroline-5-carboxylate 76.8 2 6.7E-05 38.0 3.9 40 90-132 1-40 (263)
286 2izz_A Pyrroline-5-carboxylate 76.6 2.1 7.2E-05 39.7 4.2 32 89-120 22-56 (322)
287 3obb_A Probable 3-hydroxyisobu 76.6 2.4 8.1E-05 39.6 4.6 41 88-133 3-43 (300)
288 3hn2_A 2-dehydropantoate 2-red 76.5 2 6.8E-05 39.6 4.0 33 88-121 1-33 (312)
289 4dvj_A Putative zinc-dependent 76.3 1.7 5.8E-05 41.0 3.5 96 90-208 173-269 (363)
290 3ldh_A Lactate dehydrogenase; 76.2 7.5 0.00026 37.2 8.1 142 90-258 22-182 (330)
291 3c7a_A Octopine dehydrogenase; 75.7 2.4 8.1E-05 40.3 4.4 33 88-120 1-33 (404)
292 3g17_A Similar to 2-dehydropan 75.7 1.5 5E-05 40.1 2.8 32 88-120 1-32 (294)
293 4g65_A TRK system potassium up 75.6 0.9 3.1E-05 45.0 1.5 93 90-208 236-331 (461)
294 3uog_A Alcohol dehydrogenase; 75.5 6.8 0.00023 36.6 7.5 142 90-266 191-339 (363)
295 2b69_A UDP-glucuronate decarbo 75.4 2.7 9.1E-05 38.3 4.5 31 90-121 28-59 (343)
296 1ur5_A Malate dehydrogenase; o 75.4 2.9 9.9E-05 39.0 4.8 34 88-122 1-34 (309)
297 2q3e_A UDP-glucose 6-dehydroge 75.3 2.3 7.7E-05 41.9 4.3 39 90-131 6-45 (467)
298 2zyd_A 6-phosphogluconate dehy 75.1 2.3 7.9E-05 42.3 4.3 41 89-133 15-55 (480)
299 2o3j_A UDP-glucose 6-dehydroge 75.1 2.6 8.8E-05 41.8 4.6 41 89-132 9-50 (481)
300 2y1e_A 1-deoxy-D-xylulose 5-ph 74.9 2.7 9.4E-05 41.6 4.6 112 87-209 20-135 (398)
301 2p4q_A 6-phosphogluconate dehy 74.6 2.4 8.1E-05 42.5 4.2 43 87-133 8-50 (497)
302 1f0y_A HCDH, L-3-hydroxyacyl-C 74.6 3.3 0.00011 37.8 4.9 30 90-120 16-45 (302)
303 3st7_A Capsular polysaccharide 74.5 3.2 0.00011 38.3 4.9 44 90-134 1-45 (369)
304 2aef_A Calcium-gated potassium 74.0 1.8 6.1E-05 37.8 2.8 30 89-120 9-38 (234)
305 3nep_X Malate dehydrogenase; h 73.8 7.6 0.00026 36.7 7.3 30 90-119 1-31 (314)
306 1leh_A Leucine dehydrogenase; 73.7 4.2 0.00014 39.4 5.6 36 90-129 174-209 (364)
307 2yy7_A L-threonine dehydrogena 73.5 2.3 7.8E-05 37.8 3.5 34 88-121 1-36 (312)
308 3kkj_A Amine oxidase, flavin-c 73.4 3.4 0.00012 33.3 4.2 31 88-119 1-31 (336)
309 1xq6_A Unknown protein; struct 73.3 4.3 0.00015 34.6 5.0 32 90-121 5-38 (253)
310 1ek6_A UDP-galactose 4-epimera 73.3 3.2 0.00011 37.6 4.4 32 88-120 1-33 (348)
311 3phh_A Shikimate dehydrogenase 73.3 26 0.00088 32.4 10.7 32 90-122 119-150 (269)
312 3gvp_A Adenosylhomocysteinase 73.3 2.9 0.0001 41.8 4.5 30 90-120 221-250 (435)
313 4e12_A Diketoreductase; oxidor 73.2 3.8 0.00013 37.2 4.9 39 90-132 5-43 (283)
314 3qwb_A Probable quinone oxidor 73.1 4.7 0.00016 37.0 5.6 91 90-208 150-246 (334)
315 3goh_A Alcohol dehydrogenase, 73.0 3.1 0.00011 37.9 4.3 30 90-120 144-173 (315)
316 1piw_A Hypothetical zinc-type 72.5 8.8 0.0003 35.7 7.4 30 90-120 181-210 (360)
317 2dq4_A L-threonine 3-dehydroge 72.4 3.6 0.00012 38.0 4.7 29 91-120 167-196 (343)
318 4ej6_A Putative zinc-binding d 72.3 4.4 0.00015 38.2 5.3 93 90-203 184-278 (370)
319 1xa0_A Putative NADPH dependen 72.2 8 0.00027 35.3 6.9 30 91-121 152-182 (328)
320 1e6u_A GDP-fucose synthetase; 72.1 5.4 0.00018 35.6 5.6 30 90-120 4-34 (321)
321 1txg_A Glycerol-3-phosphate de 72.0 2.9 9.9E-05 38.1 3.9 29 91-120 2-30 (335)
322 4id9_A Short-chain dehydrogena 71.9 3.2 0.00011 37.7 4.1 31 90-121 20-51 (347)
323 4gwg_A 6-phosphogluconate dehy 71.5 3.1 0.0001 41.8 4.2 40 90-133 5-44 (484)
324 2pgd_A 6-phosphogluconate dehy 71.5 3.1 0.00011 41.2 4.2 40 90-133 3-42 (482)
325 3ghy_A Ketopantoate reductase 71.4 3.4 0.00012 38.4 4.3 30 90-120 4-33 (335)
326 2cf5_A Atccad5, CAD, cinnamyl 71.3 1.7 5.7E-05 40.8 2.1 30 91-121 183-212 (357)
327 1pgj_A 6PGDH, 6-PGDH, 6-phosph 70.9 3.2 0.00011 41.2 4.1 40 90-133 2-41 (478)
328 3eag_A UDP-N-acetylmuramate:L- 70.8 15 0.00052 34.1 8.6 86 90-203 5-91 (326)
329 1y7t_A Malate dehydrogenase; N 70.6 4.1 0.00014 37.8 4.6 33 88-120 3-42 (327)
330 3mwd_B ATP-citrate synthase; A 70.6 7.2 0.00025 37.4 6.4 96 90-211 11-114 (334)
331 3ip1_A Alcohol dehydrogenase, 70.0 10 0.00034 36.1 7.3 40 90-133 215-255 (404)
332 3ruf_A WBGU; rossmann fold, UD 69.9 4.5 0.00015 36.7 4.6 32 89-121 25-57 (351)
333 1vj0_A Alcohol dehydrogenase, 69.9 4.7 0.00016 38.1 4.9 139 91-253 198-341 (380)
334 2rh8_A Anthocyanidin reductase 69.4 4.5 0.00015 36.5 4.5 31 88-119 8-39 (338)
335 2ph5_A Homospermidine synthase 69.3 2.7 9.4E-05 42.5 3.3 91 89-210 13-113 (480)
336 3m6i_A L-arabinitol 4-dehydrog 68.6 14 0.00047 34.3 7.8 28 91-119 182-210 (363)
337 2vhw_A Alanine dehydrogenase; 68.6 4.6 0.00016 38.7 4.6 30 90-120 169-198 (377)
338 3q2o_A Phosphoribosylaminoimid 68.5 4.7 0.00016 38.1 4.6 30 90-120 15-44 (389)
339 3enk_A UDP-glucose 4-epimerase 68.5 5.5 0.00019 35.9 4.9 31 89-120 5-36 (341)
340 1t2a_A GDP-mannose 4,6 dehydra 68.4 4.8 0.00016 37.1 4.5 33 88-121 23-56 (375)
341 2d8a_A PH0655, probable L-thre 68.3 4.7 0.00016 37.4 4.4 38 91-132 170-208 (348)
342 1mv8_A GMD, GDP-mannose 6-dehy 68.1 4.4 0.00015 39.3 4.4 38 91-132 2-39 (436)
343 3krt_A Crotonyl COA reductase; 67.8 6.8 0.00023 38.0 5.7 40 90-133 230-270 (456)
344 2gas_A Isoflavone reductase; N 67.8 3.7 0.00013 36.5 3.5 31 90-121 3-34 (307)
345 2q1s_A Putative nucleotide sug 67.7 5.3 0.00018 37.0 4.7 32 90-121 33-65 (377)
346 3ce6_A Adenosylhomocysteinase; 67.7 4.5 0.00015 40.8 4.5 30 90-120 275-304 (494)
347 2d5c_A AROE, shikimate 5-dehyd 67.5 4.7 0.00016 36.1 4.2 29 91-120 118-146 (263)
348 2x6t_A ADP-L-glycero-D-manno-h 67.1 4.8 0.00016 36.8 4.2 32 90-121 47-79 (357)
349 2hun_A 336AA long hypothetical 67.0 4.5 0.00015 36.4 4.0 32 90-121 4-37 (336)
350 3ay3_A NAD-dependent epimerase 66.9 2.4 8.3E-05 37.2 2.1 33 88-121 1-34 (267)
351 1gpj_A Glutamyl-tRNA reductase 66.9 4.1 0.00014 39.4 3.8 31 90-121 168-199 (404)
352 3s2e_A Zinc-containing alcohol 66.5 4.3 0.00015 37.4 3.8 132 91-253 169-303 (340)
353 1lld_A L-lactate dehydrogenase 66.5 5.6 0.00019 36.3 4.6 30 90-119 8-38 (319)
354 2c5a_A GDP-mannose-3', 5'-epim 66.3 7.3 0.00025 36.2 5.4 31 90-121 30-61 (379)
355 2dpo_A L-gulonate 3-dehydrogen 66.1 5.2 0.00018 37.6 4.4 40 90-133 7-46 (319)
356 1e3j_A NADP(H)-dependent ketos 65.9 17 0.00057 33.6 7.7 30 90-120 170-199 (352)
357 1vl0_A DTDP-4-dehydrorhamnose 65.9 8.8 0.0003 33.8 5.6 30 90-120 13-43 (292)
358 2bll_A Protein YFBG; decarboxy 65.1 6.7 0.00023 35.2 4.7 31 91-121 2-33 (345)
359 1yj8_A Glycerol-3-phosphate de 65.0 3.8 0.00013 38.6 3.1 24 88-111 20-43 (375)
360 3orq_A N5-carboxyaminoimidazol 65.0 8.6 0.00029 36.3 5.6 30 90-120 13-42 (377)
361 1pl8_A Human sorbitol dehydrog 64.9 15 0.0005 34.1 7.2 29 91-120 174-203 (356)
362 3jyn_A Quinone oxidoreductase; 64.8 4.3 0.00015 37.2 3.4 40 90-133 142-182 (325)
363 2jhf_A Alcohol dehydrogenase E 64.7 12 0.00042 34.9 6.6 30 90-120 193-223 (374)
364 1xgk_A Nitrogen metabolite rep 64.6 5.7 0.0002 37.0 4.3 32 89-121 5-37 (352)
365 1p0f_A NADP-dependent alcohol 64.5 8 0.00027 36.1 5.3 30 90-120 193-223 (373)
366 2b5w_A Glucose dehydrogenase; 64.2 6.3 0.00021 36.7 4.5 31 90-121 174-207 (357)
367 3nx4_A Putative oxidoreductase 63.9 9.7 0.00033 34.6 5.6 30 91-121 149-179 (324)
368 1e3i_A Alcohol dehydrogenase, 63.8 9.6 0.00033 35.6 5.7 29 90-119 197-226 (376)
369 1x13_A NAD(P) transhydrogenase 63.7 6.2 0.00021 38.3 4.5 30 90-120 173-202 (401)
370 1rpn_A GDP-mannose 4,6-dehydra 63.4 6.8 0.00023 35.1 4.4 32 89-121 14-46 (335)
371 3dfz_A SIRC, precorrin-2 dehyd 63.4 19 0.00064 32.5 7.3 30 90-120 32-61 (223)
372 3uko_A Alcohol dehydrogenase c 62.8 1.8 6.2E-05 40.7 0.5 30 90-120 195-225 (378)
373 2c20_A UDP-glucose 4-epimerase 62.6 7.2 0.00025 34.9 4.4 31 90-121 2-33 (330)
374 1f8f_A Benzyl alcohol dehydrog 62.5 8.6 0.00029 35.9 5.1 30 90-120 192-222 (371)
375 1l7d_A Nicotinamide nucleotide 62.1 7 0.00024 37.4 4.5 30 90-120 173-202 (384)
376 3ko8_A NAD-dependent epimerase 61.9 7.7 0.00026 34.4 4.4 30 91-121 2-32 (312)
377 2i99_A MU-crystallin homolog; 61.7 9.3 0.00032 35.4 5.1 41 90-132 136-176 (312)
378 3fbg_A Putative arginate lyase 61.3 6.8 0.00023 36.3 4.1 90 90-203 152-242 (346)
379 1orr_A CDP-tyvelose-2-epimeras 61.2 7.9 0.00027 34.7 4.4 30 90-120 2-32 (347)
380 1cdo_A Alcohol dehydrogenase; 61.1 11 0.00037 35.3 5.5 30 90-120 194-224 (374)
381 1x0v_A GPD-C, GPDH-C, glycerol 61.0 4.4 0.00015 37.4 2.7 23 89-111 8-30 (354)
382 1zej_A HBD-9, 3-hydroxyacyl-CO 60.3 8.3 0.00028 36.0 4.5 74 90-191 13-86 (293)
383 4a2c_A Galactitol-1-phosphate 60.3 2.3 8E-05 39.1 0.7 89 90-203 162-254 (346)
384 2fzw_A Alcohol dehydrogenase c 60.1 10 0.00036 35.3 5.2 30 90-120 192-222 (373)
385 2cdc_A Glucose dehydrogenase g 60.1 5.1 0.00017 37.5 3.0 31 90-121 182-212 (366)
386 2r85_A PURP protein PF1517; AT 60.1 8.2 0.00028 34.8 4.4 32 88-121 1-32 (334)
387 1rjw_A ADH-HT, alcohol dehydro 59.8 11 0.00039 34.7 5.3 30 90-120 166-195 (339)
388 2pzm_A Putative nucleotide sug 59.7 11 0.00036 34.2 5.1 31 90-121 21-52 (330)
389 3au8_A 1-deoxy-D-xylulose 5-ph 59.5 6.7 0.00023 39.7 3.9 111 90-209 78-203 (488)
390 2eez_A Alanine dehydrogenase; 59.5 8.6 0.00029 36.5 4.6 30 90-120 167-196 (369)
391 3pid_A UDP-glucose 6-dehydroge 59.0 8.8 0.0003 38.0 4.7 39 90-133 37-75 (432)
392 2ewd_A Lactate dehydrogenase,; 58.6 8.8 0.0003 35.5 4.4 32 89-121 4-35 (317)
393 2hk9_A Shikimate dehydrogenase 58.5 7.5 0.00026 35.2 3.8 31 90-121 130-160 (275)
394 2q1w_A Putative nucleotide sug 58.4 10 0.00034 34.4 4.6 31 90-121 22-53 (333)
395 1smk_A Malate dehydrogenase, g 58.2 7 0.00024 36.7 3.6 32 88-119 7-40 (326)
396 3p2y_A Alanine dehydrogenase/p 57.9 7.2 0.00025 38.2 3.8 30 90-120 185-214 (381)
397 2fp4_A Succinyl-COA ligase [GD 57.9 11 0.00038 35.3 5.0 85 91-208 15-101 (305)
398 3gqv_A Enoyl reductase; medium 57.7 12 0.00042 35.0 5.3 31 90-121 166-197 (371)
399 1kew_A RMLB;, DTDP-D-glucose 4 57.7 8 0.00028 35.1 3.9 31 91-121 2-33 (361)
400 4b8w_A GDP-L-fucose synthase; 57.4 7.7 0.00026 33.9 3.6 24 89-112 6-30 (319)
401 1iow_A DD-ligase, DDLB, D-ALA\ 57.0 11 0.00039 33.4 4.7 33 88-121 1-42 (306)
402 2z2v_A Hypothetical protein PH 56.8 9.4 0.00032 36.5 4.3 87 90-204 17-103 (365)
403 3k96_A Glycerol-3-phosphate de 56.5 10 0.00035 36.1 4.5 40 89-132 29-68 (356)
404 1oc2_A DTDP-glucose 4,6-dehydr 56.0 8.9 0.0003 34.6 3.8 32 90-121 5-38 (348)
405 2hjr_A Malate dehydrogenase; m 55.8 12 0.00042 35.0 4.9 35 87-122 12-46 (328)
406 2p5y_A UDP-glucose 4-epimerase 55.8 12 0.0004 33.4 4.5 30 91-121 2-32 (311)
407 1dlj_A UDP-glucose dehydrogena 55.6 9.4 0.00032 36.7 4.1 37 91-132 2-38 (402)
408 2y0c_A BCEC, UDP-glucose dehyd 55.6 10 0.00036 37.6 4.6 40 90-133 9-48 (478)
409 4gx0_A TRKA domain protein; me 55.2 9.1 0.00031 38.0 4.1 30 90-120 349-378 (565)
410 3mog_A Probable 3-hydroxybutyr 55.2 9.2 0.00032 38.1 4.1 40 90-133 6-45 (483)
411 2dwc_A PH0318, 433AA long hypo 54.9 17 0.00058 34.6 5.8 33 88-121 18-50 (433)
412 3tqh_A Quinone oxidoreductase; 54.3 14 0.00049 33.6 5.0 30 90-120 154-184 (321)
413 3oh8_A Nucleoside-diphosphate 54.3 11 0.00038 37.0 4.5 31 90-121 148-179 (516)
414 2x0j_A Malate dehydrogenase; o 54.2 10 0.00035 35.5 4.1 32 90-121 1-32 (294)
415 3k6j_A Protein F01G10.3, confi 54.1 18 0.00061 36.1 6.0 30 90-120 55-84 (460)
416 1sb8_A WBPP; epimerase, 4-epim 54.1 12 0.00042 33.9 4.5 31 90-121 28-59 (352)
417 4a0s_A Octenoyl-COA reductase/ 54.0 17 0.00057 34.9 5.6 40 90-133 222-262 (447)
418 2z1m_A GDP-D-mannose dehydrata 53.8 13 0.00044 33.2 4.5 31 90-121 4-35 (345)
419 1eq2_A ADP-L-glycero-D-mannohe 53.6 12 0.00042 32.8 4.3 31 91-121 1-32 (310)
420 1n2s_A DTDP-4-, DTDP-glucose o 53.5 10 0.00034 33.4 3.7 28 91-120 2-30 (299)
421 2eih_A Alcohol dehydrogenase; 53.4 28 0.00097 31.9 6.9 132 90-253 168-306 (343)
422 3hwr_A 2-dehydropantoate 2-red 53.3 13 0.00043 34.4 4.5 30 89-119 19-48 (318)
423 3g79_A NDP-N-acetyl-D-galactos 53.2 5.3 0.00018 40.0 2.0 31 90-120 19-50 (478)
424 4dio_A NAD(P) transhydrogenase 53.2 12 0.00041 36.9 4.5 31 90-122 191-221 (405)
425 3ouz_A Biotin carboxylase; str 53.1 10 0.00035 36.4 3.9 33 87-120 4-36 (446)
426 1tt7_A YHFP; alcohol dehydroge 52.9 7.5 0.00026 35.5 2.9 30 91-121 153-183 (330)
427 1y1p_A ARII, aldehyde reductas 52.7 21 0.00071 31.8 5.7 31 90-121 12-43 (342)
428 3sxp_A ADP-L-glycero-D-mannohe 52.1 15 0.00053 33.5 4.9 31 90-121 11-44 (362)
429 1omo_A Alanine dehydrogenase; 51.9 17 0.00057 34.0 5.1 39 90-130 126-164 (322)
430 4gx0_A TRKA domain protein; me 51.7 19 0.00066 35.6 5.8 41 87-131 125-165 (565)
431 1zcj_A Peroxisomal bifunctiona 51.7 18 0.00062 35.5 5.6 30 90-120 38-67 (463)
432 3ehe_A UDP-glucose 4-epimerase 51.3 11 0.00039 33.5 3.7 30 90-121 2-32 (313)
433 1udb_A Epimerase, UDP-galactos 51.2 15 0.0005 33.1 4.4 29 91-120 2-31 (338)
434 1ff9_A Saccharopine reductase; 51.2 14 0.00048 36.3 4.7 90 90-203 4-93 (450)
435 1kjq_A GART 2, phosphoribosylg 51.1 19 0.00063 33.5 5.3 32 89-121 11-42 (391)
436 2dkn_A 3-alpha-hydroxysteroid 50.6 16 0.00056 31.1 4.5 29 91-120 3-32 (255)
437 1i24_A Sulfolipid biosynthesis 50.1 15 0.00052 33.8 4.4 31 90-121 12-43 (404)
438 3d7l_A LIN1944 protein; APC893 50.0 16 0.00055 30.3 4.3 29 90-120 4-33 (202)
439 4hv4_A UDP-N-acetylmuramate--L 49.7 50 0.0017 32.5 8.4 82 90-202 23-105 (494)
440 2pk3_A GDP-6-deoxy-D-LYXO-4-he 49.5 16 0.00056 32.4 4.4 31 90-121 13-44 (321)
441 1a5z_A L-lactate dehydrogenase 49.3 13 0.00043 34.6 3.8 29 90-119 1-31 (319)
442 1gy8_A UDP-galactose 4-epimera 49.2 18 0.00061 33.3 4.8 30 91-121 4-35 (397)
443 2bka_A CC3, TAT-interacting pr 49.2 15 0.00053 31.2 4.1 31 90-120 19-51 (242)
444 2v6g_A Progesterone 5-beta-red 49.2 13 0.00045 33.6 3.8 32 90-121 2-38 (364)
445 2jl1_A Triphenylmethane reduct 49.1 10 0.00034 33.2 2.9 31 91-121 2-34 (287)
446 3d0o_A L-LDH 1, L-lactate dehy 49.0 15 0.00053 34.1 4.4 33 89-121 6-38 (317)
447 2zcu_A Uncharacterized oxidore 48.7 13 0.00045 32.3 3.6 31 91-121 1-33 (286)
448 1hyh_A L-hicdh, L-2-hydroxyiso 48.2 15 0.0005 33.8 4.0 30 90-119 2-32 (309)
449 3ax6_A Phosphoribosylaminoimid 48.1 18 0.00063 33.6 4.7 31 90-121 2-32 (380)
450 4ffl_A PYLC; amino acid, biosy 47.8 19 0.00065 33.3 4.7 30 90-120 2-31 (363)
451 1rkx_A CDP-glucose-4,6-dehydra 47.7 18 0.0006 32.9 4.4 31 90-121 10-41 (357)
452 3o38_A Short chain dehydrogena 47.6 26 0.0009 30.5 5.5 30 90-120 23-54 (266)
453 3fr7_A Putative ketol-acid red 47.0 15 0.0005 37.7 4.1 31 91-121 56-91 (525)
454 1db3_A GDP-mannose 4,6-dehydra 46.5 19 0.00066 32.7 4.5 31 90-121 2-33 (372)
455 1r6d_A TDP-glucose-4,6-dehydra 46.4 20 0.00069 32.1 4.6 31 91-121 2-38 (337)
456 1qor_A Quinone oxidoreductase; 46.4 19 0.00064 32.8 4.4 30 90-120 142-172 (327)
457 3lk7_A UDP-N-acetylmuramoylala 46.3 60 0.0021 31.4 8.3 30 90-121 10-39 (451)
458 1ez4_A Lactate dehydrogenase; 46.2 20 0.00068 33.6 4.6 34 89-122 5-38 (318)
459 1ryi_A Glycine oxidase; flavop 46.1 21 0.00073 32.4 4.8 41 79-120 7-47 (382)
460 4e4t_A Phosphoribosylaminoimid 46.0 23 0.00078 34.2 5.2 30 90-120 36-65 (419)
461 2csu_A 457AA long hypothetical 45.8 70 0.0024 31.4 8.7 82 90-208 9-94 (457)
462 3iup_A Putative NADPH:quinone 45.7 24 0.00081 33.2 5.1 80 91-200 173-262 (379)
463 3tl2_A Malate dehydrogenase; c 44.9 23 0.00079 33.3 4.9 29 90-119 9-38 (315)
464 2p4h_X Vestitone reductase; NA 44.7 21 0.00073 31.6 4.4 29 91-120 3-32 (322)
465 1lnq_A MTHK channels, potassiu 44.6 12 0.00041 34.5 2.8 36 90-130 116-151 (336)
466 3vtf_A UDP-glucose 6-dehydroge 44.5 19 0.00067 35.7 4.5 41 87-132 20-60 (444)
467 3hhp_A Malate dehydrogenase; M 44.4 8.6 0.00029 36.2 1.8 22 90-111 1-23 (312)
468 3gvi_A Malate dehydrogenase; N 44.3 21 0.00072 33.7 4.5 29 90-119 8-37 (324)
469 4hb9_A Similarities with proba 44.1 22 0.00076 32.3 4.5 29 90-119 2-30 (412)
470 1pzg_A LDH, lactate dehydrogen 43.8 24 0.00081 33.1 4.8 32 90-122 10-41 (331)
471 1pjc_A Protein (L-alanine dehy 43.6 23 0.00077 33.5 4.6 31 90-121 168-198 (361)
472 3itj_A Thioredoxin reductase 1 43.4 19 0.00066 31.7 3.9 36 85-121 18-53 (338)
473 1pjq_A CYSG, siroheme synthase 43.0 72 0.0025 31.2 8.3 93 90-211 13-106 (457)
474 3gms_A Putative NADPH:quinone 42.7 14 0.00049 33.9 3.0 30 90-120 146-176 (340)
475 1b8p_A Protein (malate dehydro 42.7 23 0.00079 33.0 4.5 31 89-119 5-42 (329)
476 1y6j_A L-lactate dehydrogenase 42.0 26 0.00088 32.7 4.7 24 89-112 7-30 (318)
477 3k5i_A Phosphoribosyl-aminoimi 42.0 20 0.0007 34.2 4.1 32 89-121 24-55 (403)
478 4a7p_A UDP-glucose dehydrogena 41.9 23 0.00079 34.9 4.6 31 89-120 8-38 (446)
479 4eg0_A D-alanine--D-alanine li 41.8 26 0.0009 31.8 4.6 36 85-121 9-53 (317)
480 2pbz_A Hypothetical protein; N 41.8 24 0.00083 33.3 4.5 42 88-131 1-42 (320)
481 2ggs_A 273AA long hypothetical 41.7 21 0.00073 30.7 3.8 29 91-121 2-31 (273)
482 4ea9_A Perosamine N-acetyltran 40.6 33 0.0011 29.5 4.9 31 90-121 13-43 (220)
483 3pi7_A NADH oxidoreductase; gr 40.6 28 0.00097 32.0 4.7 29 91-120 167-196 (349)
484 2egg_A AROE, shikimate 5-dehyd 40.5 27 0.00093 32.1 4.6 31 90-121 142-173 (297)
485 1x7d_A Ornithine cyclodeaminas 40.3 30 0.001 32.8 5.0 41 90-132 130-170 (350)
486 3ond_A Adenosylhomocysteinase; 40.2 24 0.00083 35.6 4.5 31 90-122 266-296 (488)
487 3orf_A Dihydropteridine reduct 40.2 29 0.00099 30.3 4.5 35 85-120 18-53 (251)
488 1uay_A Type II 3-hydroxyacyl-C 40.2 23 0.0008 29.9 3.8 30 90-120 3-33 (242)
489 4dim_A Phosphoribosylglycinami 40.1 25 0.00085 32.8 4.3 32 89-121 7-38 (403)
490 3ihm_A Styrene monooxygenase A 40.0 21 0.00071 34.0 3.8 34 86-120 19-52 (430)
491 3tqq_A Methionyl-tRNA formyltr 40.0 26 0.0009 33.0 4.4 32 88-120 1-32 (314)
492 2hrz_A AGR_C_4963P, nucleoside 39.4 21 0.00072 32.0 3.6 31 90-120 15-52 (342)
493 2c29_D Dihydroflavonol 4-reduc 39.2 22 0.00077 31.9 3.7 30 90-120 6-36 (337)
494 3ado_A Lambda-crystallin; L-gu 39.0 27 0.00091 33.1 4.3 35 90-128 7-41 (319)
495 2ehd_A Oxidoreductase, oxidore 38.7 28 0.00095 29.6 4.1 32 88-120 4-36 (234)
496 4f6l_B AUSA reductase domain p 38.7 19 0.00065 35.0 3.3 31 90-121 151-182 (508)
497 1ja9_A 4HNR, 1,3,6,8-tetrahydr 38.6 32 0.0011 29.8 4.5 31 90-121 22-53 (274)
498 3h5n_A MCCB protein; ubiquitin 38.6 19 0.00065 34.3 3.2 110 89-203 118-235 (353)
499 1yvv_A Amine oxidase, flavin-c 38.4 28 0.00096 30.9 4.2 31 88-119 1-31 (336)
500 3fbs_A Oxidoreductase; structu 38.2 34 0.0012 29.5 4.6 32 88-120 1-32 (297)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=2.1e-84 Score=628.46 Aligned_cols=223 Identities=61% Similarity=1.014 Sum_probs=218.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||||||||||+++|+++++++++||||||+++|++||+|||||||+||+|++++++++ ++|.||||+|+|++++||
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~-~~l~i~Gk~I~v~~e~dp 80 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDD-KHIIVDGKKIATYQERDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECS-SEEEETTEEEEEECCSSG
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcC-CEEEECCEEEEEEeeccc
Confidence 7999999999999999999999899999999998999999999999999999999999975 699999999999999999
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchhhhHHHHHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLAK 249 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPvlK 249 (334)
+++||+++|+||||||||.|+++|+|++|+++||||||||+|++|+|||||||||+.|+++++||||||||||||+|++|
T Consensus 81 ~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~lk 160 (332)
T 3pym_A 81 ANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAK 160 (332)
T ss_dssp GGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHHH
T ss_pred ccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred HHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 250 VVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 250 vL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|||+|||++++||||||+|++|+++|+|++||||++|++++||||++||+||+++| +|+|+|+
T Consensus 161 vL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gk 225 (332)
T 3pym_A 161 VINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGK 225 (332)
T ss_dssp HHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTS
T ss_pred HHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCC
Confidence 999999999999999999999999999998899999999999999999999999999 9999986
No 2
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=8.1e-84 Score=625.39 Aligned_cols=225 Identities=47% Similarity=0.751 Sum_probs=219.0
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+|++||||||||||||+++|+++++++++|||||| ++|++||+|||||||+||+|++++++++ ++|.||||+|+|+++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~~~v~~~~-~~l~inGk~I~v~~e 79 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSE 79 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCSSCEEEET-TEEEETTEEEEEECC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcCCeEEEcC-CEEEECCEEEEEEEe
Confidence 57899999999999999999999998999999999 5999999999999999999999999985 699999999999999
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CCCeEEeecCccccCCCCCEEecCCchhhhHH
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~p~~V~GVN~~~y~~~~~IVSnASCTTncLA 245 (334)
+||+++||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+|||||||||+.|+++++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~La 159 (338)
T 3lvf_P 80 PDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLA 159 (338)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHH
T ss_pred cccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhH
Confidence 99999999999999999999999999999999999999999999997 69999999999999988899999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCC-CCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMK-DWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 246 PvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~k-d~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
|++|+|||+|||++++||||||+|++|+++|+||+| ||||+|++++||||++||+||+++| +|+|+|+
T Consensus 160 p~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gk 229 (338)
T 3lvf_P 160 PVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGK 229 (338)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTS
T ss_pred HHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCc
Confidence 999999999999999999999999999999999977 9999999999999999999999999 9999986
No 3
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=7.3e-84 Score=625.71 Aligned_cols=225 Identities=67% Similarity=1.065 Sum_probs=219.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCC-eEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKG-TINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~-~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||||||||||+++|+++++++++||||||+++|++||+|||||||+||+|++ +++++++++|.||||+|+|++++
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e~ 82 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEec
Confidence 48999999999999999999999899999999998999999999999999999999 99998633899999999999999
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchhhhHHHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPv 247 (334)
||+++||+++|+||||||||.|+++|+|++|+++||||||||+|++|+|||||||||+.|+++++||||||||||||+|+
T Consensus 83 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~ 162 (337)
T 3v1y_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPL 162 (337)
T ss_dssp SGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred CcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+|||+|||++++||||||+|++|+++||+++|||||+|++++||||++||+||+++| +|+|+|+
T Consensus 163 lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gk 229 (337)
T 3v1y_O 163 AKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGK 229 (337)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTS
T ss_pred HHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCc
Confidence 99999999999999999999999999999999899999999999999999999999999 9999986
No 4
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1.4e-83 Score=627.61 Aligned_cols=225 Identities=55% Similarity=0.907 Sum_probs=218.3
Q ss_pred CceeEEEEcCChhHHHHHHH----HHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEE--------eCCCeEE
Q 019933 88 GNTKVGINGFGRIGRLVLRV----AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINV--------VDDSTLE 155 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRa----l~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~--------e~~~~L~ 155 (334)
|++||||||||||||+++|+ ++++++++|||||||+.|++||+|||||||+||+|++++++ + +++|.
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~-~~~l~ 79 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAK-DDTLV 79 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSS-CCEEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCC-CCEEE
Confidence 77899999999999999999 77888899999999889999999999999999999999999 5 47999
Q ss_pred ECCEEEEEEe-ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CCCeEEeecCccccCC-CCC
Q 019933 156 INGKLIKVFS-KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKP-NMN 232 (334)
Q Consensus 156 inGk~I~V~~-~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~p~~V~GVN~~~y~~-~~~ 232 (334)
||||+|+|++ ++||+++||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+|||||||||+.|++ +++
T Consensus 80 inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~ 159 (359)
T 3ids_C 80 VNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHH 159 (359)
T ss_dssp ETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCS
T ss_pred ECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCC
Confidence 9999999999 999999999999999999999999999999999999999999999997 6999999999999998 789
Q ss_pred EEecCCchhhhHHHHHHHH-hhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCC
Q 019933 233 IVSNASCTTNCLAPLAKVV-HEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVF 310 (334)
Q Consensus 233 IVSnASCTTncLAPvlKvL-~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l 310 (334)
||||||||||||+|++|+| ||+|||++++||||||||++|+++|+||+|||||+|++++||||++|||||+++| +|+|
T Consensus 160 IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL 239 (359)
T 3ids_C 160 VVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIPST 239 (359)
T ss_dssp EEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSGGG
T ss_pred EEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhchhh
Confidence 9999999999999999999 9999999999999999999999999999889999999999999999999999999 9999
Q ss_pred CCC
Q 019933 311 ADI 313 (334)
Q Consensus 311 ~~~ 313 (334)
+|+
T Consensus 240 ~gk 242 (359)
T 3ids_C 240 QGK 242 (359)
T ss_dssp TTS
T ss_pred cCc
Confidence 996
No 5
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=3.7e-83 Score=620.39 Aligned_cols=223 Identities=42% Similarity=0.667 Sum_probs=217.2
Q ss_pred CceeEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||||||||||+++|+++++ ++++||||||+ .|++||+|||||||+||+|++++++++ ++|.||||+|++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~~~v~~~~-~~l~i~Gk~I~v~~ 78 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFPKEVEVAG-DTIDVGYGPIKVHA 78 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCCEECS-SEEESSSSEEEEEC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCCCeEEEec-CEEEECCEEEEEEe
Confidence 678999999999999999999998 68999999998 899999999999999999999999975 69999999999999
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCCchhhhH
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCL 244 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~~~IVSnASCTTncL 244 (334)
++||+++||+++|+||||||||.|+++|+|+.|+++||||||||+|++| +|||||||||+.|+++++||||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~L 158 (335)
T 3doc_A 79 VRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNCL 158 (335)
T ss_dssp CSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred ecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhhh
Confidence 9999999999999999999999999999999999999999999999987 799999999999998889999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 245 APvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|++|+|||+|||++++||||||+|++|+++|+|| ||||++|+|++||||++||+||+++| +|+|+|+
T Consensus 159 ap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~-kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gk 227 (335)
T 3doc_A 159 APVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMH-KDLYRARAAALSMIPTSTGAAKAVGLVLPELKGK 227 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTC
T ss_pred HHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCcc-ccccccccCcceEecCCCchHHHHHHhccccCCC
Confidence 99999999999999999999999999999999998 89999999999999999999999999 9999986
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=1.6e-82 Score=618.23 Aligned_cols=223 Identities=64% Similarity=1.044 Sum_probs=217.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||||||||||+++|++++++ ++|||||||+.|++||+|||||||+||+|++++++++ ++|.||||+|+|++++|
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~-~~l~i~Gk~I~v~~e~d 84 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRN-GQLVVDNHEISVYQCKE 84 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEET-TEEEETTEEEEEECCSS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcC-CEEEECCEEEEEEecCC
Confidence 379999999999999999999987 9999999999999999999999999999999999985 69999999999999999
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCC-CCCEEecCCchhhhHHHH
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~-~~~IVSnASCTTncLAPv 247 (334)
|+++||+++|+||||||||.|+++|+|+.|+++||||||||+|++|+|||||||||+.|++ +++||||||||||||+|+
T Consensus 85 p~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap~ 164 (346)
T 3h9e_O 85 PKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAPL 164 (346)
T ss_dssp GGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHHH
T ss_pred hhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997 789999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+|||+|||++++||||||+|++|+++|||++||||++|++++||||++|||||+++| +|+|+|+
T Consensus 165 lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gk 231 (346)
T 3h9e_O 165 AKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGK 231 (346)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTT
T ss_pred HHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCc
Confidence 99999999999999999999999999999999899999999999999999999999999 9999986
No 7
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=8.1e-83 Score=619.57 Aligned_cols=223 Identities=47% Similarity=0.801 Sum_probs=203.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||||||||||+++|+++++++++||||||+ .|++||+|||||||+||+|++++++++ ++|.||||+|+|++++|
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~~~v~~~~-~~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFDGTVEAFE-DHLLVDGKMIRLLNNRD 81 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEECS-SEEEETTEEEEEECCSC
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCCCcEEEcC-CEEEECCEEEEEeecCC
Confidence 4799999999999999999999989999999998 899999999999999999999999975 69999999999999999
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CCCeEEeecCccccCC-CCCEEecCCchhhhHHH
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYKP-NMNIVSNASCTTNCLAP 246 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~p~~V~GVN~~~y~~-~~~IVSnASCTTncLAP 246 (334)
|+++||+++|+||||||||.|+++|+|+.|+++||||||||+|++ |+|||||||||+.|++ +++||||||||||||+|
T Consensus 82 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~Lap 161 (345)
T 4dib_A 82 PKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLAP 161 (345)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred hhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhHH
Confidence 999999999999999999999999999999999999999999997 5899999999999997 68999999999999999
Q ss_pred HHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCCC
Q 019933 247 LAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADIH 314 (334)
Q Consensus 247 vlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~~ 314 (334)
++|+|||+|||++++||||||+|++|+++|+|| ||||++|+|++||||++||+||+++| +|+|+|+-
T Consensus 162 ~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkl 229 (345)
T 4dib_A 162 VVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKL 229 (345)
T ss_dssp HHHHHHHHHCEEEEEEEEEECC--------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTE
T ss_pred HHHHHHHhcCeEEEEEEeeeeccCCceeccccc-cccccchhhhhceecCCCchHHHHhhhccccCCcE
Confidence 999999999999999999999999999999999 89999999999999999999999999 99999873
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=1.8e-80 Score=605.13 Aligned_cols=223 Identities=48% Similarity=0.795 Sum_probs=214.9
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+|++||||||||||||+++|+++++ +|+||||||+ .|++||+|||||||+||+|+++++.++ ++|.|||++|+|+++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~~~v~~~~-~~l~i~Gk~I~v~~~ 95 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYNKKVESRD-GAIVVDGREIKIIAE 95 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEET-TEEEETTEEEEEECC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCCCCEEEcC-CEEEECCEEEEEEEc
Confidence 5678999999999999999999999 7999999998 899999999999999999999999985 699999999999999
Q ss_pred cCCCCCCCCccCccEEEeccCCCCC----HHHHHHHHH-cCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCCch
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTT----IAKASAHMK-GGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCT 240 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t----~e~a~~hl~-aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~~~IVSnASCT 240 (334)
+||+++||+++|+||||||||.|++ +|+++.|++ +||||||||+|++| +|||||||||+.|+++++||||||||
T Consensus 96 ~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCT 175 (356)
T 3hja_A 96 RDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCT 175 (356)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHH
T ss_pred CChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccc
Confidence 9999999999999999999999999 999999999 99999999999987 79999999999999888999999999
Q ss_pred hhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 241 TncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
||||+|++|+|||+|||++++||||||+|++|+++|+|+ |||||+|+|++||||++||+||+++| +|+|+|+
T Consensus 176 Tn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~-kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gk 248 (356)
T 3hja_A 176 TNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPH-SDLRRARAAALSIIPTSTGAAKAVGLVLPELKGK 248 (356)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTT
T ss_pred hhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcc-cccccccccccEEEcCCCchHHHHHHhccccCCc
Confidence 999999999999999999999999999999999999999 89999999999999999999999999 9999986
No 9
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=5.5e-78 Score=586.02 Aligned_cols=223 Identities=52% Similarity=0.878 Sum_probs=215.2
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
|++||||||||||||+++|+++++++|+||||||+ .|++|++|||+|||+||+|+++++.++ ++|.+||+.|++++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~~~v~~~~-~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFKGSVEAKD-DSIVVDGKEIKVFAQK 78 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEECS-SEEEETTEEEEEECCS
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCCCcEEEcC-CEEEECCEEEEEEEcC
Confidence 56899999999999999999999999999999994 899999999999999999999999975 6999999999999999
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCC-eEEeecCccccCC-CCCEEecCCchhhhHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAP-MFVVGVNEKTYKP-NMNIVSNASCTTNCLA 245 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p-~~V~GVN~~~y~~-~~~IVSnASCTTncLA 245 (334)
||++++|+++|+||||||||.|+++|+++.|+++||||||||+|++|+| ||||||||+.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999997 5789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 246 PvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
|++|+|||+|||++++||||||+|++|+++|+|| +||||+|++++||||++||+||+++| +|+|+|+
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gk 226 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPH-KDFRRARAAAINIVPTTTGAAKAIGEVIPELKGK 226 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTT
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchhhhcCCc-chhhhhhhHhhCccCCCCChHHHHHHhhhccCCC
Confidence 9999999999999999999999999999999998 89999999999999999999999999 9999986
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.1e-77 Score=584.45 Aligned_cols=224 Identities=58% Similarity=0.946 Sum_probs=217.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||||||||||+++|+++++++||||+||||+.+++|++|||||||+||+|+++++.++ ++|.+||+.|.+++++|
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~-~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHAD-GFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEET-TEEEESSCEEEEECCSS
T ss_pred heEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcC-CEEEECCEEEEEEEcCC
Confidence 68999999999999999999999999999999987999999999999999999999999985 69999999999999999
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCCchhhhHHHH
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPv 247 (334)
|++++|+++|+||||||||.|+++|+++.|+++||||||||+|++| +||||||||++.|++.++||||||||||||+|+
T Consensus 90 p~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~Lap~ 169 (345)
T 2b4r_O 90 PSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPL 169 (345)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHH
T ss_pred cccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHHHHH
Confidence 9999999999999999999999999999999999999999999986 799999999999997678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCC--CCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPS--MKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~--~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+|||+|||++++||||||+|++|+++|+++ ++|||++|++++||||++||+||+++| +|+|+|+
T Consensus 170 lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gk 238 (345)
T 2b4r_O 170 AKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGK 238 (345)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTT
T ss_pred HHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCc
Confidence 99999999999999999999999999999998 489999999999999999999999999 9999986
No 11
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=3.7e-77 Score=578.90 Aligned_cols=221 Identities=48% Similarity=0.736 Sum_probs=214.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcC---CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 90 TKVGINGFGRIGRLVLRVAAFR---DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~---~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+||||||||||||+++|+++++ ++||||||||+ .|++|++|||+|||+||+|++++++++ ++|.+||+.|+++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~~~v~~~~-~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFPGTVSVNG-SYMVVNGDKIRVDAN 79 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEET-TEEEETTEEEEEECC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCCCCEEEeC-CEEEECCEEEEEEEc
Confidence 6999999999999999999998 79999999996 899999999999999999999999985 699999999999999
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CCC-eEEeecCccccCCCCCEEecCCchhhhH
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAP-MFVVGVNEKTYKPNMNIVSNASCTTNCL 244 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~p-~~V~GVN~~~y~~~~~IVSnASCTTncL 244 (334)
+||+++||+++|+||||||||.|+++|+++.|+++||||||||+|++ |+| ||||||||+.|++.++||||||||||||
T Consensus 80 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~L 159 (335)
T 1obf_O 80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNCL 159 (335)
T ss_dssp SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHHH
T ss_pred CCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999997 789 9999999999997678999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 245 APvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|++|+|||+|||++++||||||+|++|+++|++| +||||+|++++||||++||+||+++| +|+|+|+
T Consensus 160 ap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gk 228 (335)
T 1obf_O 160 APLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYH-EDLRRARSATMSMIPTKTGAAAAVGDVLPELDGK 228 (335)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCC-SSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTS
T ss_pred HHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccc-cccccccchhhccccCCCcchHhHhhhccccCCc
Confidence 99999999999999999999999999999999998 89999999999999999999999999 9999986
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=6.1e-71 Score=534.28 Aligned_cols=220 Identities=50% Similarity=0.773 Sum_probs=212.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||||||||||+++|+|+++ +|+||+|||+ .|++||+|||+|||+||+|.++++.++ +.|.++|+.|.+++++||
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~~~v~~~~-~~l~v~g~~i~v~~~~dp 77 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDD-QYLYVDGKAIRATAVKDP 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECS-SEEEETTEEEEEECCSSG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCCceEEEcC-CEEEECCEEEEEEecCCh
Confidence 4999999999999999999998 8999999995 899999999999999999999999974 689999999999999999
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEecCCchhhhHHHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~-~~~IVSnASCTTncLAPv 247 (334)
++++|+++++||||||||.|+++|+++.|+++||||||||+|++| +|+||||||++.|++ .++||||||||||||+|+
T Consensus 78 ~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap~ 157 (331)
T 2g82_O 78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPV 157 (331)
T ss_dssp GGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 799999999999996 478999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+|||+|||++++|||||++|++|+++|++| +||||+|++++||||++||++|+++| +|+|+|+
T Consensus 158 lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~-~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gk 223 (331)
T 2g82_O 158 MKVLEEAFGVEKALMTTVHSYTNDQRLLDLPH-KDLRRARAAAINIIPTTTGAAKATALVLPSLKGR 223 (331)
T ss_dssp HHHHHHHTCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTS
T ss_pred HHHHHHhcCccEEEEEEEeecccccchhcccc-ccccccchhhhCccccCCCchhhhhhhHHhcCCC
Confidence 99999999999999999999999999999998 89999999999999999999999999 9999984
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=7.2e-71 Score=542.50 Aligned_cols=223 Identities=44% Similarity=0.773 Sum_probs=214.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||||||||||+++|+|+++ ++|+||+|||+ .++++++|||+|||+||+|.+++++++ +.|.+||+.|.+++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~~~v~~~~-~~l~v~g~~i~v~~ 78 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYDE-NSITVNGKTMKIVC 78 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEET-TEEEETTEEEEEEC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCCCcEEEeC-CeEEECCeEEEEEe
Confidence 568999999999999999999998 89999999996 899999999999999999999999975 68999999999999
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEecCCchhh
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-AP-MFVVGVNEKTYKP-NMNIVSNASCTTN 242 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p-~~V~GVN~~~y~~-~~~IVSnASCTTn 242 (334)
++||++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +| +||||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 9999999999899999999999999999999999999999999999987 78 9999999999997 4789999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 243 cLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
||+|++|+|||+|||++++|||||++|++|+++|++| +||||+|+|++||||++||++|+++| +|+|+|+
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~-~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gk 229 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGK 229 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTT
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccch-hhhhhcchHhhCeEeccCchHHHHHhhhHhhhCc
Confidence 9999999999999999999999999999999999999 89999999999999999999999999 9999985
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.8e-69 Score=525.07 Aligned_cols=223 Identities=44% Similarity=0.773 Sum_probs=214.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||||||||||.++|+|+++ ++|+||+|||+ .++++++|||+|||+||+|.++++.++ +.|.+||+.|.+++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~~~v~~~~-~~l~v~g~~i~v~~ 78 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFNADISYDE-NSITVNGKTMKIVC 78 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCCSCEEEET-TEEEETTEEEEEEC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCCCcEEEcC-CeeeecCceEEEEe
Confidence 568999999999999999999998 89999999996 899999999999999999999999975 68999999999999
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CC-eEEeecCccccCC-CCCEEecCCchhh
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-AP-MFVVGVNEKTYKP-NMNIVSNASCTTN 242 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p-~~V~GVN~~~y~~-~~~IVSnASCTTn 242 (334)
++||++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +| +||||||++.|++ .++||||||||||
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 9999999999999999999999999999999999999999999999987 78 9999999999997 4789999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 243 cLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
||+|++|+||++|||++++|||||++|++|+++|++| +||||+|+|++||||++||++|+++| +|+|+|+
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~-~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gk 229 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASH-RDLRRARAAAVNIVPTTTGAAKAVALVIPELKGK 229 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTT
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccch-hhhhccccHHHceEcccCchHHHHHHHhHhhcCc
Confidence 9999999999999999999999999999999999999 89999999999999999999999999 9999985
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=3.4e-69 Score=523.27 Aligned_cols=223 Identities=47% Similarity=0.775 Sum_probs=213.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEE-EeCCCeEEECCEEEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTIN-VVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~-~e~~~~L~inGk~I~V~~ 165 (334)
++||||||||||||.++|+|+++ +++|||+|||+ .|++||+|||+|||+||+|.++++ .+ ++.|.++|+.|.+++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~~~v~~~~-~~~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFDADVKTAG-DSAISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCSSCEEECT-TSEEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCccceeEEec-CCeEEECCeEEEEEe
Confidence 37999999999999999999999 89999999995 899999999999999999999998 54 358999999999999
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCCchhhhH
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCL 244 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~~~IVSnASCTTncL 244 (334)
++||++++|+++++||||||||.|+++|+++.|+++|+|+|++|+|+.| +|+||||||++.|++.++||||||||||||
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~l 158 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCL 158 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHH
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHH
Confidence 9999999999999999999999999999999999999999999999876 799999999999986679999999999999
Q ss_pred HHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCCC
Q 019933 245 APLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADIH 314 (334)
Q Consensus 245 APvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~~ 314 (334)
+|++|+|||+|||++++|||||++|++|+++|++| +||||+|++++||||++||++|+++| +|+|+|+-
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~-~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl 228 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH-RDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKL 228 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCC-SSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTE
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcch-hhhccchhhhcCcccccchhhHHHHhhhhhhcCcE
Confidence 99999999999999999999999999999999999 89999999999999999999999999 99998863
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=9.6e-68 Score=516.12 Aligned_cols=225 Identities=63% Similarity=1.041 Sum_probs=213.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
+++||||||||||||.++|+|+++++||||+||||+.++++++|||+|||+||+|.++++.++ ++|.+||+.|.+++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~-~~l~v~g~~i~v~~~~ 94 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSG-KDLCINGKVVKVFQAK 94 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC--CEEETTEEEEEECCS
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeC-CEEEECCeEEEEEecC
Confidence 357999999999999999999999999999999976899999999999999999999999875 6899999999999999
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCCC-CCEEecCCchhhhHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPN-MNIVSNASCTTNCLA 245 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~-~~IVSnASCTTncLA 245 (334)
||++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +|+||||||++.|++. .+||||||||||||+
T Consensus 95 dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~la 174 (354)
T 3cps_A 95 DPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCLA 174 (354)
T ss_dssp CGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHHH
Confidence 99999999889999999999999999999999999999999999986 7999999999999974 789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCC--CCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSM--KDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 246 PvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~--kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
|++|+||++|||++++|||||++|++|+++|++++ |||||+|++++||||++||+++++++ +|+|+|+
T Consensus 175 p~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gk 245 (354)
T 3cps_A 175 PLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGK 245 (354)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTT
T ss_pred HHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999984 79999999999999999999999999 9999987
No 17
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=1.8e-67 Score=510.32 Aligned_cols=221 Identities=52% Similarity=0.826 Sum_probs=213.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||||||||||.++|+|+++++|+||+|||. .++++++|||+|||+||+|.++++.++ ++|.++|+.|.+++++||
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~~~v~~~~-~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLDAEVSVNG-NNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEET-TEEEETTEEEEEECCSSG
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcCceEEEcc-CcEEECCEEEEEEecCCh
Confidence 799999999999999999999999999999995 899999999999999999999999975 689999999999989999
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCC-CCCEEecCCchhhhHHHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKP-NMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~-~~~IVSnASCTTncLAPv 247 (334)
++++|++.++||||||||.|+++|+++.|+++|+||||||+|++| +|+||||||++.|++ ..+||||||||||||+|+
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap~ 159 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPF 159 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHHH
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999987 799999999999986 378999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+||++|||++++|||||++|++|+++|++| +|||++|++++||||++||++++++| +|+|+|+
T Consensus 160 lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~-~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gk 225 (334)
T 3cmc_O 160 AKVLHEQFGIVRGMMTTVHSYTNDQRILDLPH-KDLRRARAAAESIIPTTTGAAKAVALVLPELKGK 225 (334)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTT
T ss_pred HHHHHHhcCceeeeEEEEEeccchhhhccccc-cccccchhhhhCEEeeccCcccchhhhChhhcCc
Confidence 99999999999999999999999999999998 89999999999999999999999999 9999984
No 18
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=3.9e-67 Score=508.04 Aligned_cols=225 Identities=67% Similarity=1.068 Sum_probs=215.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCC-CeEEE-eCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFK-GTINV-VDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~-~~v~~-e~~~~L~inGk~I~V~~ 165 (334)
|++||||||||||||.++|++.++++++||+|||++.++++++|||+|||+||+|. ++++. ++ +.|.+||+.|.+++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~-~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDS-KTLLLGEKPVTVFG 80 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSS-SEEEETTEEEEEEC
T ss_pred CceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecC-CeeEECCeEEEEEe
Confidence 55899999999999999999999999999999996679999999999999999999 99887 54 58999999999999
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchhhhHH
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLA 245 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTTncLA 245 (334)
++||++++|++.++|+||||||.|+++|.++.|+++|+||||||+|++|.|+||||||++.|++.++||||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 99999999998899999999999999999999999999999999999889999999999999866789999999999999
Q ss_pred HHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 246 PLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 246 PvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
|++|+||++|||++++|||+|++|++|+++|++|+||||++|++++||||++||+++++++ +|+|+|+
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gk 229 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGK 229 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTT
T ss_pred HHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCc
Confidence 9999999999999999999999999999999999789999999999999999999999999 9999983
No 19
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=9.5e-67 Score=504.82 Aligned_cols=221 Identities=49% Similarity=0.822 Sum_probs=213.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 90 TKVGINGFGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
+||||||||||||.++|+|+++ ++||||+|||. .|+++++|||+|||+||+|.++++.++ +.|.++|+.|.+++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~~~v~~~~-~~l~v~g~~i~v~~~~ 78 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFPGKVEYTE-NSLIVDGKEIKVFAEP 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCSSCEEECS-SEEEETTEEEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcCCcEEEcC-CEEEECCeEEEEEecC
Confidence 5999999999999999999998 89999999995 899999999999999999999999975 6899999999999899
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCC-eEEeecCccccCCCCCEEecCCchhhhHHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAP-MFVVGVNEKTYKPNMNIVSNASCTTNCLAP 246 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p-~~V~GVN~~~y~~~~~IVSnASCTTncLAP 246 (334)
||++++|+++++|+||||||.|+++|+++.|+++|+||||||+|++|+| ++|||||++.|++..+||||||||||||+|
T Consensus 79 dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~lap 158 (332)
T 1hdg_O 79 DPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIAP 158 (332)
T ss_dssp SGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHHH
T ss_pred ChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998889 999999999998657899999999999999
Q ss_pred HHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 247 LAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 247 vlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
++|+|+++|||++++|||||++|++|+++|++| +|||++|++++||||++||+++++++ +|+|+|+
T Consensus 159 ~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~-~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gk 225 (332)
T 1hdg_O 159 IVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPH-KDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGK 225 (332)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCC-SSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTT
T ss_pred HHHHHHHhcCeeEeEEEEEEeccchhhhhcCcc-cccccchhHhhCcccccCCcccchhhhCccccCC
Confidence 999999999999999999999999999999998 89999999999999999999999999 9999984
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.1e-66 Score=505.31 Aligned_cols=223 Identities=40% Similarity=0.654 Sum_probs=202.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHc---CCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAF---RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~---~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
|++||||||||||||.++|+|++ +++|+||+|||. .++++++|||+|||+||+|.++++.++ ++|.++|+.|.++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~~~v~~~~-~~l~v~g~~i~v~ 78 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFAWEVRQER-DQLFVGDDAIRVL 78 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEET-TEEEETTEEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCCceEEEcC-CeeEECCEEEEEE
Confidence 56899999999999999999999 889999999996 899999999999999999999999875 6899999999999
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC-CCCC-eEEeecCccccCCCCCEEecCCchhh
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-ADAP-MFVVGVNEKTYKPNMNIVSNASCTTN 242 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs-~D~p-~~V~GVN~~~y~~~~~IVSnASCTTn 242 (334)
+++||++++|++.++|+||||||.|+++|+++.|+++|+||||||+|+ .|+| ++|||||++.|+++.+||||||||||
T Consensus 79 ~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCttn 158 (339)
T 2x5j_O 79 HERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTN 158 (339)
T ss_dssp CCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHHH
Confidence 999999999998899999999999999999999999999999999998 6788 99999999999975699999999999
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 243 CLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 243 cLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
||+|++|+||++|||++++|||||++|++|+++|++| +|||++|++++||||++||+++++++ +|+|+|+
T Consensus 159 ~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~-~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gk 229 (339)
T 2x5j_O 159 CIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYH-PDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDR 229 (339)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEECCC------------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTS
T ss_pred HHHHHHHHHHHccCcceeeEEEEEecccccccccccc-ccccchhhHHhCcccccCChHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999 89999999999999999999999999 9999984
No 21
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=2.5e-66 Score=501.37 Aligned_cols=220 Identities=65% Similarity=1.028 Sum_probs=212.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||||||||||+++|+++++++++||+|||. .++++++|||+|||+||+|.+.++.++ +.|.+||+.|++++++||
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~~~v~~~~-~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFDGTVEVKD-GHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEEET-TEEEETTEEEEEECCSSG
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCCCeEEEcC-CEEEECCEEEEEEEcCCh
Confidence 799999999999999999999999999999994 899999999999999999999999875 689999999999999999
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC-CCeEEeecCccccCCCCCEEecCCchhhhHHHHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD-APMFVVGVNEKTYKPNMNIVSNASCTTNCLAPLA 248 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D-~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPvl 248 (334)
+++||++.++|+||||||.|+++|+++.|+++|+|+|++|+|+++ .|++|||||++.|+ ..+||||||||||||+|++
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~l 158 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPLA 158 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHHH
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHHH
Confidence 999999899999999999999999999999999999999999864 79999999999998 5799999999999999999
Q ss_pred HHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCC
Q 019933 249 KVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFAD 312 (334)
Q Consensus 249 KvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~ 312 (334)
|+||++|||++++|||||++|++|+++|++|+||||++|++++||||++||+++++++ +|+|+|
T Consensus 159 kpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~g 223 (330)
T 1gad_O 159 KVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNG 223 (330)
T ss_dssp HHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTT
T ss_pred HHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcC
Confidence 9999999999999999999999999999999889999999999999999999999999 999998
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=4.7e-66 Score=499.33 Aligned_cols=225 Identities=66% Similarity=1.079 Sum_probs=215.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
|++||||||||||||.++|++.++++++||+|||++.++++++||++|||+||+|.+.++.++ +.|.+||+.|++++++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~-~~l~v~g~~i~v~~~~ 80 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN-GKLVINGNPITIFQER 80 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEET-TEEEETTEEEEEECCS
T ss_pred CceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcC-CeEEECCeEEEEEecC
Confidence 458999999999999999999999999999999965799999999999999999999999875 6899999999999999
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchhhhHHHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPv 247 (334)
||++++|++.++|+||||||.|+++|.++.|+++|+|+|++|+|++|.|++|||||++.|++..+||||||||||||+|+
T Consensus 81 d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~~~ 160 (335)
T 1u8f_O 81 DPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPL 160 (335)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHHHH
T ss_pred CHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999986678999999999999999
Q ss_pred HHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccchhhhhc-CCCCCCC
Q 019933 248 AKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKVKYR-YPVFADI 313 (334)
Q Consensus 248 lKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGAAkAv~k-~P~l~~~ 313 (334)
+|+||++|||++++|||+|++|++|+++|++|+||||++|++++||||++||++++++| +|+|+|+
T Consensus 161 lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gk 227 (335)
T 1u8f_O 161 AKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGK 227 (335)
T ss_dssp HHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTS
T ss_pred HHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCc
Confidence 99999999999999999999999999999998779999999999999999999999999 9999983
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=7.9e-51 Score=394.53 Aligned_cols=198 Identities=18% Similarity=0.212 Sum_probs=176.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccc--cccccC--CCeE-EEeCCCeEEECCEEEE
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVF--KGTI-NVVDDSTLEINGKLIK 162 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYD--SthGkf--~~~v-~~e~~~~L~inGk~I~ 162 (334)
|++||||||||||||.++|++.++++|+||+|||. ++++++|||+|| ++||+| ++++ ++++ +.|.+++
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~-~~l~v~~---- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDNERVKLFED-AGIPVEG---- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCHHHHHHHHH-TTCCCCC----
T ss_pred CceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCCceeecccC-CeEEECC----
Confidence 55899999999999999999999989999999995 599999999999 999998 5555 4543 4677776
Q ss_pred EEeccCCCCCCCCccCccEEEeccCCCCCHHHHH-HHHHcCCCEEEEeCCCC-C-CC-eEEeecCccccCCCCCEEecCC
Q 019933 163 VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKAS-AHMKGGAKKVVISAPSA-D-AP-MFVVGVNEKTYKPNMNIVSNAS 238 (334)
Q Consensus 163 V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~-~hl~aGaKkVIISaPs~-D-~p-~~V~GVN~~~y~~~~~IVSnAS 238 (334)
++.++.| ++|+||||||.+.+.+.++ .|+++| ++||+|+|.+ | +| +||||||++.|++ ++||+|||
T Consensus 74 -----~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn~s 143 (343)
T 2yyy_A 74 -----TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRVVS 143 (343)
T ss_dssp -----BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEECC
T ss_pred -----chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc-CCEEeccc
Confidence 3445556 8999999999999999996 999999 5699999986 5 78 9999999999986 78999999
Q ss_pred chhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccC----Cccchhhhhc-CCCCCCC
Q 019933 239 CTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKVKYR-YPVFADI 313 (334)
Q Consensus 239 CTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPt----sTGAAkAv~k-~P~l~~~ 313 (334)
||||||+|++|+|||+|||++++|||||++|+ ++ |++|++++||||+ +||++|+++| +|+|+|+
T Consensus 144 CtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg-------~~----~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~gk 212 (343)
T 2yyy_A 144 CNTTGLCRILYAINSIADIKKARIVLVRRAAD-------PN----DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEGK 212 (343)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEEEEEESSC-------TT----CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTTS
T ss_pred hhhHHHHHHHHHHHHHcCceEEEEEeeeeccC-------cC----cchhhHHhcccCCCCCCCCcchHHHHHhhhccccc
Confidence 99999999999999999999999999999998 33 6778999999999 9999999999 9999975
No 24
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-38 Score=306.69 Aligned_cols=191 Identities=25% Similarity=0.322 Sum_probs=161.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+|||||| ||+|||.++|+|++++ ++++.++ ++...+ .+ +++|.++|+.+.+++. +
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l~-----------~~~s~~----------~~-g~~l~~~g~~i~v~~~-~ 56 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARN-FPLSELR-----------LYASPR----------SA-GVRLAFRGEEIPVEPL-P 56 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTT-CCCSCCE-----------EEECGG----------GS-SCEEEETTEEEEEEEC-C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEE-----------Eeeccc----------cC-CCEEEEcCceEEEEeC-C
Confidence 4899999 9999999999999763 5532222 222111 11 2478899999999876 5
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCCCCCEEecCCchhhh
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPNMNIVSNASCTTNC 243 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~~~~IVSnASCTTnc 243 (334)
|+ +| ++|+||||+|.|+++|.++.|+++|+| +|+.+++ |.|++|+|||++.|++..+||+||||||||
T Consensus 57 ~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~--vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~tt~ 129 (331)
T 2yv3_A 57 EG--PL---PVDLVLASAGGGISRAKALVWAEGGAL--VVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCTTAI 129 (331)
T ss_dssp SS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCE--EEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHHHHH
T ss_pred hh--hc---CCCEEEECCCccchHHHHHHHHHCCCE--EEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHHHHH
Confidence 65 58 899999999999999999999999994 5555543 589999999999998656799999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEEEeecCCC------------CCCccCCCCCCCCcccccccccccCC--------ccchhh
Q 019933 244 LAPLAKVVHEEFGILEGLMTTVHATTAT------------QKTVDGPSMKDWRGGRGASQNIIPSS--------TGAAKV 303 (334)
Q Consensus 244 LAPvlKvL~d~fGI~~g~mTTVHA~T~~------------Q~~~D~~~~kd~R~~RaA~~NIIPts--------TGAAkA 303 (334)
|+|++|+|+++|||+++.|||+|+||++ |+++|+++.+++|++|.++.||||++ |+++++
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~ 209 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMK 209 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHH
Confidence 9999999999999999999999999999 99999987789999999999999999 999999
Q ss_pred h----hc-C--CCCC
Q 019933 304 K----YR-Y--PVFA 311 (334)
Q Consensus 304 v----~k-~--P~l~ 311 (334)
+ +| + |+|+
T Consensus 210 i~~e~~kil~~~~l~ 224 (331)
T 2yv3_A 210 VVWETHKIFGDDTIR 224 (331)
T ss_dssp HHHHHHHHTTCTTCE
T ss_pred HHHHHHHHhCCCCce
Confidence 9 77 4 7653
No 25
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=2.8e-38 Score=303.50 Aligned_cols=193 Identities=21% Similarity=0.246 Sum_probs=165.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccc--cccccCCCeE-EEeCCCeEEECCEEEEEE
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVFKGTI-NVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYD--SthGkf~~~v-~~e~~~~L~inGk~I~V~ 164 (334)
|++||||||||+|||.++|++.++++++||+|+|. +++++.++++|| ++||+|++.+ .+++ +.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~~-~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASEEFIPRFEK-EGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHH-HTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCccccccccccceeccC-CceEEcC------
Confidence 56899999999999999999999999999999995 688999999988 8999998765 2221 1233333
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-C-C-CeEEeecCccccCCCCCEEecCCchh
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-D-A-PMFVVGVNEKTYKPNMNIVSNASCTT 241 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D-~-p~~V~GVN~~~y~~~~~IVSnASCTT 241 (334)
|++++.| ++|+|++|||.+.+.+.+..|+++| |+||+++|.+ | . |+||+|||++.|++ .++|+|+||+|
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~t 143 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCNT 143 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHHH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeecccccccccceEEeccCHHHHhh-CCcEEecCcHH
Confidence 3334434 7999999999999999999999999 6799999975 4 4 59999999999985 68999999999
Q ss_pred hhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccC---Cccchhhhhc-CCCCC
Q 019933 242 NCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS---STGAAKVKYR-YPVFA 311 (334)
Q Consensus 242 ncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPt---sTGAAkAv~k-~P~l~ 311 (334)
|||+|++|+|++. |+++.|+|+|++++. ||++|++++||||+ +||+++++++ +| |+
T Consensus 144 ~~l~P~~~~l~~~--I~~g~i~ti~a~s~~-----------~~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~ 203 (334)
T 2czc_A 144 TGLVRTLSAIREY--ADYVYAVMIRRAADP-----------NDTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN 203 (334)
T ss_dssp HHHHHHHHHHGGG--EEEEEEEEEEESSCT-----------TCCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC
T ss_pred HHHHHHHHHHHHH--hccccEEEEEEecCc-----------cccccChhhcEEeccCCCCchhhhhheEEE-EE
Confidence 9999999999987 999999999999986 36778999999999 9999999999 88 65
No 26
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.7e-38 Score=306.68 Aligned_cols=192 Identities=19% Similarity=0.239 Sum_probs=164.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccc--cccccCCCeE-EEeCCCeEEECCEEEEEEec
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYD--STHGVFKGTI-NVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYD--SthGkf~~~v-~~e~~~~L~inGk~I~V~~~ 166 (334)
+||||||+|+|||.++|++.++++|++|+|||. ++++.+++++|| ++||.|.+.+ .+++ ..+.+++.
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~~~v~~~~~-~~l~v~~~------- 71 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIPERVKLFEK-AGIEVAGT------- 71 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSGGGHHHHHH-TTCCCCEE-------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccccceeeecC-CceEEcCC-------
Confidence 799999999999999999999889999999995 678899999998 8999988765 3332 24555542
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CC--CeEEeecCccccCCCCCEEecCCchhhh
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DA--PMFVVGVNEKTYKPNMNIVSNASCTTNC 243 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~--p~~V~GVN~~~y~~~~~IVSnASCTTnc 243 (334)
++++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.+ |. |+||||||++.|++ .+||+||||+|||
T Consensus 72 --~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt~ 144 (337)
T 1cf2_P 72 --VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTTG 144 (337)
T ss_dssp --HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHHH
T ss_pred --HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHHH
Confidence 222222 799999999999999999999999964 88888875 33 99999999999985 6899999999999
Q ss_pred HHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccC----Cccchhhhhc-CCCC
Q 019933 244 LAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKVKYR-YPVF 310 (334)
Q Consensus 244 LAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPt----sTGAAkAv~k-~P~l 310 (334)
|+|++|+|+++|||++++|||+|++|+ ++ +.+|++++||||+ ++|.++.+.| + +|
T Consensus 145 l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p~----~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l 204 (337)
T 1cf2_P 145 LCRTLKPLHDSFGIKKVRAVIVRRGAD-------PA----QVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI 204 (337)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEESSC-------TT----CTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC
T ss_pred HHHHHHHHHHhcCcceeEEEEEEEeec-------CC----ccccchhcCEEeccCCCCCcchHHHHhhh-ee
Confidence 999999999999999999999999997 33 4556889999999 8999999987 6 54
No 27
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.5e-36 Score=292.82 Aligned_cols=195 Identities=21% Similarity=0.232 Sum_probs=147.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
++|||||| ||+|||.++|+|+++ +++++++||+.. + -| ..+.++|+.+.+ .
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-~-------------~G-----------~~~~~~~~~i~~-~ 56 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-S-------------EG-----------KTYRFNGKTVRV-Q 56 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-T-------------TT-----------CEEEETTEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-C-------------CC-----------CceeecCceeEE-e
Confidence 37999999 999999999999998 789999999741 1 11 245577777777 3
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC---CCCCeEEeecCccccCCC--CCEEecCCch
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKPN--MNIVSNASCT 240 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs---~D~p~~V~GVN~~~y~~~--~~IVSnASCT 240 (334)
+.+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. .|.|++|+|||++.|++. .+||+||||+
T Consensus 57 ~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~ 132 (336)
T 2r00_A 57 NVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCS 132 (336)
T ss_dssp EGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHH
T ss_pred cCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChH
Confidence 45554 674 89999999999999999999999999543334443 257999999999999852 6799999999
Q ss_pred hhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCC-CccCCCC-----------CCCCcccccccccccCCc-----c----
Q 019933 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQK-TVDGPSM-----------KDWRGGRGASQNIIPSST-----G---- 299 (334)
Q Consensus 241 TncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~-~~D~~~~-----------kd~R~~RaA~~NIIPtsT-----G---- 299 (334)
||||+|++++|+++|||+++.|||+|++|++|+ .+|.++. .++|++|.++.|+||+++ |
T Consensus 133 tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~E 212 (336)
T 2r00_A 133 TIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKE 212 (336)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHH
T ss_pred HHHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHH
Confidence 999999999999999999999999999999975 9999874 278999999999999985 7
Q ss_pred ---chhhhhc-CCCCCCC
Q 019933 300 ---AAKVKYR-YPVFADI 313 (334)
Q Consensus 300 ---AAkAv~k-~P~l~~~ 313 (334)
.++.++| +|.++++
T Consensus 213 e~k~~~e~~kil~~~~~~ 230 (336)
T 2r00_A 213 EMKMVWETQKIFNDPSIM 230 (336)
T ss_dssp HHHHHHHHHHHTTCTTCE
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 6888888 7887653
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.6e-37 Score=297.67 Aligned_cols=184 Identities=16% Similarity=0.214 Sum_probs=153.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||||+|+|||.++|++.++++++||+|||. ++++.+++++|+- +.++..++|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g-----------------------~~~~~~~~~ 56 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG-----------------------IRIYVPQQS 56 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT-----------------------CCEECCGGG
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC-----------------------cceecCcCH
Confidence 799999999999999999999999999999995 6788888887531 112222233
Q ss_pred CCCCCCc-------------cCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC--CCeEEeecCccccCCCCCEE
Q 019933 170 AEIPWGD-------------YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD--APMFVVGVNEKTYKPNMNIV 234 (334)
Q Consensus 170 ~~i~W~~-------------~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D--~p~~V~GVN~~~y~~~~~IV 234 (334)
+++ |++ .++|+||||||.+.+++.++.|+++|+|+|.+|++..+ +++||+|||++++.+ .++|
T Consensus 57 ~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iI 134 (340)
T 1b7g_O 57 IKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYI 134 (340)
T ss_dssp HHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEE
T ss_pred HHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCc
Confidence 333 331 16899999999999999999999999999888988654 479999999777654 4599
Q ss_pred ecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccC----Cccchhhhhc-CCC
Q 019933 235 SNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPS----STGAAKVKYR-YPV 309 (334)
Q Consensus 235 SnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPt----sTGAAkAv~k-~P~ 309 (334)
+|+|||||||+|++|+|+++|||++++|||+|+++. ++ ++ .|++.+||||+ +||+++++++ +|+
T Consensus 135 snpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~-~~---~~~~~~niip~~~~i~t~~a~ev~~vlp~ 203 (340)
T 1b7g_O 135 RVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QK-EV---KKGPINSLVPDPATVPSHHAKDVNSVIRN 203 (340)
T ss_dssp EECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TT-CC---SCCCSSCCEESSSSSSCTHHHHHHTTSTT
T ss_pred ccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cc-cc---hHHHHcCCCCCCcCCCCCchhHHHHhCCC
Confidence 999999999999999999999999999999998863 44 44 45789999998 8999999998 887
Q ss_pred CC
Q 019933 310 FA 311 (334)
Q Consensus 310 l~ 311 (334)
|+
T Consensus 204 l~ 205 (340)
T 1b7g_O 204 LD 205 (340)
T ss_dssp CE
T ss_pred Cc
Confidence 74
No 29
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.4e-37 Score=296.86 Aligned_cols=196 Identities=12% Similarity=0.112 Sum_probs=164.0
Q ss_pred CceeEEEEc-CChhHHHHHHHHHc--CCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAF--RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~--~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
|++||+|+| ||+|||.++|.|.+ +++++++++|+. +..| ..+.++|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~--------------~~~g-----------~~~~~~g~~i~~~ 59 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA--------------ESAG-----------QRMGFAESSLRVG 59 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT--------------TTTT-----------CEEEETTEEEECE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecC--------------CCCC-----------CccccCCcceEEe
Confidence 457999999 99999999999994 478999999974 1122 2345677777774
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCC--CCeEEeecCccccCCCC--CEEecCCch
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD--APMFVVGVNEKTYKPNM--NIVSNASCT 240 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D--~p~~V~GVN~~~y~~~~--~IVSnASCT 240 (334)
. .+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..| .|++|++||++.|++.. +||+|||||
T Consensus 60 ~-~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~ 134 (340)
T 2hjs_A 60 D-VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAV 134 (340)
T ss_dssp E-GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHH
T ss_pred c-CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHH
Confidence 3 45554 75 8999999999999999999999999987777888643 68999999999998632 799999999
Q ss_pred hhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCC-ccCCCC--CCCCcc---------cccccccccCCc-----c----
Q 019933 241 TNCLAPLAKVVHEEFGILEGLMTTVHATTATQKT-VDGPSM--KDWRGG---------RGASQNIIPSST-----G---- 299 (334)
Q Consensus 241 TncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~-~D~~~~--kd~R~~---------RaA~~NIIPtsT-----G---- 299 (334)
||||+|++++|+++|||+++.|||+|+||++|+. +|.++. +|||++ |.+++||||+++ |
T Consensus 135 tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~E 214 (340)
T 2hjs_A 135 AAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAI 214 (340)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHH
T ss_pred HHHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHH
Confidence 9999999999999999999999999999999974 887653 578875 778999999998 7
Q ss_pred ---chhhhhc-CCCCCCC
Q 019933 300 ---AAKVKYR-YPVFADI 313 (334)
Q Consensus 300 ---AAkAv~k-~P~l~~~ 313 (334)
+++.++| +|+++++
T Consensus 215 e~k~~~~~~kil~~~~~~ 232 (340)
T 2hjs_A 215 ERRIFAEVQALLGERIGP 232 (340)
T ss_dssp HHHHHHHHHHHTGGGBCC
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 8888888 7877654
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=2.4e-36 Score=295.15 Aligned_cols=194 Identities=17% Similarity=0.147 Sum_probs=161.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+|||||| ||+||+.++|+++++.++++++| |+|.||| +|+-- . .++|+.+.+....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i-----------~~~~~~s-~G~~v---~-------~~~g~~i~~~~~~~ 59 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRP-----------VFFSTSQ-LGQAA---P-------SFGGTTGTLQDAFD 59 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEE-----------EEEESSS-TTSBC---C-------GGGTCCCBCEETTC
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEE-----------EEEEeCC-CCCCc---c-------ccCCCceEEEecCC
Confidence 6999999 99999999994444434765444 7788886 88621 1 13455677766555
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEEecCCc
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIVSNASC 239 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~~--~--~IVSnASC 239 (334)
+++ |. ++|+||+|+|.+.+++.++.|+++|+|++||+++++ |.|++|+|||++.|++. . ++|+||||
T Consensus 60 ~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp~C 135 (367)
T 1t4b_A 60 LEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNC 135 (367)
T ss_dssp HHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEECCH
T ss_pred hHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeCCH
Confidence 554 64 899999999999999999999999999999999985 57999999999999752 1 69999999
Q ss_pred hhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCC--C-----------------ccCCCCC--CCCc-------------
Q 019933 240 TTNCLAPLAKVVHEEFGILEGLMTTVHATTATQK--T-----------------VDGPSMK--DWRG------------- 285 (334)
Q Consensus 240 TTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~--~-----------------~D~~~~k--d~R~------------- 285 (334)
||||++|++++|+++|+|+++.|+|+|++|++++ + +|+|+++ ||||
T Consensus 136 ttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~~~ 215 (367)
T 1t4b_A 136 TVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPV 215 (367)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccCcc
Confidence 9999999999999999999999999999999953 2 5778832 8988
Q ss_pred ---ccccccccccCCcc------------chhhhhc-CCC
Q 019933 286 ---GRGASQNIIPSSTG------------AAKVKYR-YPV 309 (334)
Q Consensus 286 ---~RaA~~NIIPtsTG------------AAkAv~k-~P~ 309 (334)
+|.+++|+||+.+| +++.+.| +|.
T Consensus 216 ~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~ 255 (367)
T 1t4b_A 216 DNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNT 255 (367)
T ss_dssp TTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTC
T ss_pred cccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCc
Confidence 58899999999999 9999998 654
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.8e-34 Score=276.20 Aligned_cols=198 Identities=19% Similarity=0.196 Sum_probs=161.4
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+| ||+||+.++|+|.++++++|++|++..... --+||++|+.+. + +.+.++++.+.+ ++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-----g~~~~~~~~~~~------~-~~~~~~~~~~~~-~~~ 70 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-----GKKYKDAVKWIE------Q-GDIPEEVQDLPI-VST 70 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-----TSBHHHHCCCCS------S-SSCCHHHHTCBE-ECS
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-----CCCHHHhcCccc------c-cccccCCceeEE-eeC
Confidence 58999999 999999999999999999999999521111 123688887664 1 234444444445 334
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCC----------CCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKP----------NMN 232 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~----------~~~ 232 (334)
|++. |. ++|+||+|+|.+.+++.+..|+++|+| ||+++++ |.|++|+|||++.|.. ..+
T Consensus 71 d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~ 144 (350)
T 2ep5_A 71 NYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKGI 144 (350)
T ss_dssp SGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSSE
T ss_pred CHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCce
Confidence 5544 53 899999999999999999999999995 7888864 5799999999998873 236
Q ss_pred EEecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccc-hhhhh---c-C
Q 019933 233 IVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKVKY---R-Y 307 (334)
Q Consensus 233 IVSnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGA-AkAv~---k-~ 307 (334)
+|+||+|+|||++|++++|+++|||+++.|||+|++|++|+. +.+ .|.+++||||+++|+ +|.+. + +
T Consensus 145 iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~e~k~~~E~~~~l 216 (350)
T 2ep5_A 145 LVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS------FMAIEGNIIPYIKGEEDKIAKELTKLN 216 (350)
T ss_dssp EEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB------HHHHTTCCBCCCTTHHHHHHHHHHHHT
T ss_pred EEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC------ChHHhCCEEeccCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 333 467899999999997 99984 5 9
Q ss_pred CCCCCC
Q 019933 308 PVFADI 313 (334)
Q Consensus 308 P~l~~~ 313 (334)
|.|+|.
T Consensus 217 ~~~~g~ 222 (350)
T 2ep5_A 217 GKLENN 222 (350)
T ss_dssp CEECSS
T ss_pred hhcccc
Confidence 999885
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=3.2e-32 Score=263.24 Aligned_cols=200 Identities=22% Similarity=0.274 Sum_probs=155.6
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC-CCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND-PFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND-~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
.|++||||+| ||+||+.++|+|.++++++|++|++ ..... -+||+.|+.+... .+..+++.+.+
T Consensus 6 ~M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g------~~~~~~~~~~~~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 6 KMKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAG------KKYKDACYWFQDR-------DIPENIKDMVV- 71 (354)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTT------SBHHHHSCCCCSS-------CCCHHHHTCBC-
T ss_pred cccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccc------ccHHHhccccccc-------ccccCceeeEE-
Confidence 3668999999 9999999999999999999999984 31111 1256777765210 11122233333
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCC----------
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKP---------- 229 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~---------- 229 (334)
.+.|+++ |.+.++|+||+|+|.+.+++.++.|+++|+| ||+++++ |.|++|+|||++.|..
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 3345554 6445899999999999999999999999984 8898874 4789999999999873
Q ss_pred CCCEEecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccc-hhhhhc--
Q 019933 230 NMNIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKVKYR-- 306 (334)
Q Consensus 230 ~~~IVSnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGA-AkAv~k-- 306 (334)
..++|+||+|+|||++|.+++|+++|||+++.|+|+|++|++|+. +.+ .+.++.||+|+.+|+ .|.+.+
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~------~~~~~~ni~py~~~~~~k~~~Ei~ 219 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP------SMAILDNLIPFIKNEEEKMQTESL 219 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC------HHHHTTCCBSCCTTHHHHHHHHHH
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc------chHHhCCEEeccCchhhHHHHHHH
Confidence 235999999999999999999999999999999999999999988 333 357899999999996 666543
Q ss_pred --CCCCCC
Q 019933 307 --YPVFAD 312 (334)
Q Consensus 307 --~P~l~~ 312 (334)
+|.++|
T Consensus 220 ~~l~~~~g 227 (354)
T 1ys4_A 220 KLLGTLKD 227 (354)
T ss_dssp HHTSEEET
T ss_pred HHHhcccc
Confidence 555554
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.97 E-value=8.1e-32 Score=262.00 Aligned_cols=180 Identities=13% Similarity=0.114 Sum_probs=148.3
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+| ||+|||.++|+|.+++++++++|++. .+.. .+||++|++|.+.+ . . .+.+ +
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~-~~~g-----~~~~~~~~~~~~~v-~-~--dl~~--------~-- 75 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD-RKAG-----QSMESVFPHLRAQK-L-P--TLVS--------V-- 75 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS-TTTT-----SCHHHHCGGGTTSC-C-C--CCBC--------G--
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc-hhcC-----CCHHHhCchhcCcc-c-c--ccee--------c--
Confidence 47999999 99999999999999999999999985 3332 67899999987653 1 1 1221 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC---CC------------------CeEEeec---C
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DA------------------PMFVVGV---N 223 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~---D~------------------p~~V~GV---N 223 (334)
+ ++ .|. ++|+||+|+|.+++++.++.| ++|+ +||+.+++ +. +++|||| |
T Consensus 76 ~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n 148 (359)
T 1xyg_A 76 K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEIL 148 (359)
T ss_dssp G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHH
T ss_pred c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccC
Confidence 1 22 575 899999999999999999999 9999 46666553 22 4788888 9
Q ss_pred ccccCCCCCEEecCCchhhhHHHHHHHHhhhcCee--EEEEEEEeecCCCCCC-ccCCCCCCCCcccccccccccCCccc
Q 019933 224 EKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQKT-VDGPSMKDWRGGRGASQNIIPSSTGA 300 (334)
Q Consensus 224 ~~~y~~~~~IVSnASCTTncLAPvlKvL~d~fGI~--~g~mTTVHA~T~~Q~~-~D~~~~kd~R~~RaA~~NIIPtsTGA 300 (334)
++.|++ .+||+||||+|||++|++++|+++|+|+ ++.|+|+|++|++|+. +|.+| +++ +.+||+|+++|+
T Consensus 149 ~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~ni~py~~~~ 221 (359)
T 1xyg_A 149 REDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANL-YSE-----IAEGISSYGVTR 221 (359)
T ss_dssp HHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGB-HHH-----HTTCCEECSCSC
T ss_pred HHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhh-hHH-----HhcCeecccccc
Confidence 999985 6899999999999999999999999999 9999999999999994 88776 333 578999999996
Q ss_pred hh
Q 019933 301 AK 302 (334)
Q Consensus 301 Ak 302 (334)
.+
T Consensus 222 h~ 223 (359)
T 1xyg_A 222 HR 223 (359)
T ss_dssp CT
T ss_pred cc
Confidence 33
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.96 E-value=3.8e-31 Score=255.86 Aligned_cols=187 Identities=16% Similarity=0.043 Sum_probs=148.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+| ||+|||.++|+|.+++++++++|++. .+.. .+|++.|++|.+.. .+.+ .
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~-~~~g-----~~~~~~~~~~~g~~-------------~~~~---~ 61 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR-RFAG-----EPVHFVHPNLRGRT-------------NLKF---V 61 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS-TTTT-----SBGGGTCGGGTTTC-------------CCBC---B
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc-hhhC-----chhHHhCchhcCcc-------------cccc---c
Confidence 47999999 99999999999999999999999984 2222 56889999886420 1112 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CC-----------------CeEEeec---Cccc
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DA-----------------PMFVVGV---NEKT 226 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~-----------------p~~V~GV---N~~~ 226 (334)
+++ .| .++|+||+|+|.+.+++.++.|+++|+|.|.+|++.. +. +.+|||| |++.
T Consensus 62 ~~~--~~--~~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~ 137 (345)
T 2ozp_A 62 PPE--KL--EPADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREA 137 (345)
T ss_dssp CGG--GC--CCCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHH
T ss_pred chh--Hh--cCCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHH
Confidence 222 37 3899999999999999999999999995332344321 22 4678887 9999
Q ss_pred cCCCCCEEecCCchhhhHHHHHHHHhhhcCee--EEEEEEEeecCCCCCC-ccCCCCCCCCcccccccccccCCccchhh
Q 019933 227 YKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQKT-VDGPSMKDWRGGRGASQNIIPSSTGAAKV 303 (334)
Q Consensus 227 y~~~~~IVSnASCTTncLAPvlKvL~d~fGI~--~g~mTTVHA~T~~Q~~-~D~~~~kd~R~~RaA~~NIIPtsTGAAkA 303 (334)
++. .++|+||||+|||++|.+++|+++|+|+ ++.|+|+|++|++|+. +|.+| +++ +.+||+|+++|+-+-
T Consensus 138 i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~-~~~-----~~~n~~py~~~~h~~ 210 (345)
T 2ozp_A 138 LKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASH-HPE-----RAGSIRVYKPTGHRH 210 (345)
T ss_dssp HHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGC-HHH-----HTTCCEEEECSCCTH
T ss_pred hhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCcccccccc-chh-----hccccccCCCCCccC
Confidence 986 6899999999999999999999999999 9999999999999965 78776 333 579999999986332
Q ss_pred hhcCCCCC
Q 019933 304 KYRYPVFA 311 (334)
Q Consensus 304 v~k~P~l~ 311 (334)
+|+++
T Consensus 211 ---~pei~ 215 (345)
T 2ozp_A 211 ---TAEVV 215 (345)
T ss_dssp ---HHHHH
T ss_pred ---hHhHH
Confidence 55554
No 35
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.94 E-value=9.7e-28 Score=233.94 Aligned_cols=199 Identities=18% Similarity=0.197 Sum_probs=147.9
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||.| +|.+|+.++|.|.++|+++|+.+....-.-+.+...+.+. .|..++. +++.+.+ ++
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~------------~~~~~~v-~~ 71 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPK------------EIADMEI-KP 71 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCCH------------HHHTCBC-EE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-ccccccc------------ccccceE-Ee
Confidence 468999999 9999999999999999999998854210001111111000 0000110 0011122 22
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC---CCCCeEEeecCccccCC--C--------CCE
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKP--N--------MNI 233 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs---~D~p~~V~GVN~~~y~~--~--------~~I 233 (334)
-++++ |. ++|+||+|+|.+.+++.+..|+++|+|.|.+|++. .|.|++|+|||++.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 32 89999999999999999999999999777778775 25899999999999853 1 259
Q ss_pred EecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccc-hhh---hhc-CC
Q 019933 234 VSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKV---KYR-YP 308 (334)
Q Consensus 234 VSnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGA-AkA---v~k-~P 308 (334)
|+||+|+|||+++.|++|+++|||+++.|+|+|+||++|+. +.+ .+.++.|+||+.+|. .|. +.+ +|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB------GGGTTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999988 333 257899999999998 776 566 78
Q ss_pred CCCC
Q 019933 309 VFAD 312 (334)
Q Consensus 309 ~l~~ 312 (334)
.|+|
T Consensus 220 ~l~g 223 (359)
T 4dpk_A 220 EVKR 223 (359)
T ss_dssp TSCC
T ss_pred hccc
Confidence 7776
No 36
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.94 E-value=9.7e-28 Score=233.94 Aligned_cols=199 Identities=18% Similarity=0.197 Sum_probs=148.4
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||.| +|.+|+.++|.|.++|+++|+.+....-.-+.+...+.+. .|..++. +++.+.+ ++
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~~------------~~~~~~v-~~ 71 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVPK------------EIADMEI-KP 71 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCCH------------HHHTCBC-EE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-ccccccc------------ccccceE-Ee
Confidence 468999999 9999999999999999999998854210001111111000 0000110 0011122 22
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC---CCCCeEEeecCccccCC--C--------CCE
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKP--N--------MNI 233 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs---~D~p~~V~GVN~~~y~~--~--------~~I 233 (334)
-++++ |. ++|+||+|+|.+.+++.+..|+++|+|.|.+|++. .|.|++|+|||++.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23333 32 89999999999999999999999999777778775 25899999999999853 1 259
Q ss_pred EecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccc-hhh---hhc-CC
Q 019933 234 VSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKV---KYR-YP 308 (334)
Q Consensus 234 VSnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGA-AkA---v~k-~P 308 (334)
|+||+|+|||+++.|++|+++|||+++.|+|+|+||++|+. +.+ .+.++.|+||+.+|. .|. +.+ +|
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~------~~~~~~N~ipy~~~~e~k~~~Ei~kil~ 219 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP------SLDVVDNILPLGDGYDAKTIKEIFRILS 219 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB------HHHHTTCCEECCHHHHHHHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc------ChHHhCCeEeecCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987 333 257899999999998 776 666 88
Q ss_pred CCCC
Q 019933 309 VFAD 312 (334)
Q Consensus 309 ~l~~ 312 (334)
.|+|
T Consensus 220 ~l~g 223 (359)
T 4dpl_A 220 EVKR 223 (359)
T ss_dssp TSCC
T ss_pred hccc
Confidence 8877
No 37
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.91 E-value=1.3e-24 Score=212.80 Aligned_cols=156 Identities=18% Similarity=0.254 Sum_probs=125.3
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
|++||||.| +|.+|+.++|.|.++ |.++++.+... +.- +..+.+.|+.+.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~--------------~sa-----------G~~~~~~~~~~~~- 54 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA--------------RSA-----------GKSLKFKDQDITI- 54 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT--------------TTT-----------TCEEEETTEEEEE-
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc--------------ccC-----------CCcceecCCCceE-
Confidence 678999999 999999999999987 55666555432 101 2345567776666
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC---CCCCeEEeecCccccCCCCCEEecCCchh
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYKPNMNIVSNASCTT 241 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs---~D~p~~V~GVN~~~y~~~~~IVSnASCTT 241 (334)
++.+++. |. ++|+||+|+|.+.+++.++.|+++|++.|-+|++. .|.|++|+|||++.++...++|+||+|+|
T Consensus 55 ~~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpgC~t 130 (366)
T 3pwk_A 55 EETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCST 130 (366)
T ss_dssp EECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCCHHH
T ss_pred eeCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCCcHH
Confidence 3344443 43 89999999999999999999999999543345443 24799999999999986578999999999
Q ss_pred hhHHHHHHHHhhhcCeeEEEEEEEeecCCCCC
Q 019933 242 NCLAPLAKVVHEEFGILEGLMTTVHATTATQK 273 (334)
Q Consensus 242 ncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~ 273 (334)
||++|++++|+++|||+++.|+|+|++|+.-+
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~ 162 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGM 162 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCH
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCc
Confidence 99999999999999999999999999998854
No 38
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.91 E-value=3.9e-25 Score=215.11 Aligned_cols=180 Identities=16% Similarity=0.068 Sum_probs=143.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCC-----CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEE
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRD-----DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIK 162 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~-----d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~ 162 (334)
++||+|+| +|+||+.++|.|.+++ ++++++++.. .+... +|++.|++|.+.. + + .
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~-~~agk-----~~~~~~~~l~~~~----~--~-------~ 69 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA-TSAGS-----TLGEHHPHLTPLA----H--R-------V 69 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES-SCTTS-----BGGGTCTTCGGGT----T--C-------B
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC-CcCCC-----chhhhcccccccc----e--e-------e
Confidence 47999999 9999999999999998 8999999863 12211 2566777665310 1 1 1
Q ss_pred EEeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC--C-C--------------CeEEeec--C
Q 019933 163 VFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA--D-A--------------PMFVVGV--N 223 (334)
Q Consensus 163 V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~--D-~--------------p~~V~GV--N 223 (334)
+ .+.+++. |. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. | + |..|+++ |
T Consensus 70 ~-~~~~~~~--~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n 143 (352)
T 2nqt_A 70 V-EPTEAAV--LG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGA 143 (352)
T ss_dssp C-EECCHHH--HT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTH
T ss_pred e-ccCCHHH--hc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccC
Confidence 1 1122222 54 899999999999999999999 99986555677753 2 2 5556666 9
Q ss_pred ccccCCCCCEEecCCchhhhHHHHHHHHhhhcCee-EEEEEEEeecCCC-CCCccCCCCCCCCccccccccccc
Q 019933 224 EKTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL-EGLMTTVHATTAT-QKTVDGPSMKDWRGGRGASQNIIP 295 (334)
Q Consensus 224 ~~~y~~~~~IVSnASCTTncLAPvlKvL~d~fGI~-~g~mTTVHA~T~~-Q~~~D~~~~kd~R~~RaA~~NIIP 295 (334)
.+.++. .++|+||+|+|+|+++.|++|+++|+|+ ++.|+|+|++|+. |+..|..+ .++|+.+..+.|++|
T Consensus 144 ~~~i~~-~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~-~~~~~~~~~ay~~~~ 215 (352)
T 2nqt_A 144 RDQLRG-TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLL-GAEVIGSARAYNIAG 215 (352)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGS-HHHHTTCCEECSTTT
T ss_pred HHHHhc-CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCcccccccc-HHHHhhhcccccCCC
Confidence 999984 6899999999999999999999999999 9999999999999 99999888 678888888888888
No 39
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.91 E-value=6.2e-24 Score=206.36 Aligned_cols=152 Identities=24% Similarity=0.380 Sum_probs=123.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHcC--CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 90 TKVGING-FGRIGRLVLRVAAFR--DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~--~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+||||.| +|.+|+.++|.|.++ |.++++.+... +.- +.++.+.|+.+.+ ++
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~--------------~~a-----------G~~~~~~~~~~~~-~~ 55 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA--------------RSQ-----------GRKLAFRGQEIEV-ED 55 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT--------------TTS-----------SCEEEETTEEEEE-EE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc--------------ccC-----------CCceeecCCceEE-Ee
Confidence 6999999 999999999999998 55566555431 111 2356677777666 33
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC-----CCCCeEEeecCc-cccCCC-CCEEecCCc
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-----ADAPMFVVGVNE-KTYKPN-MNIVSNASC 239 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs-----~D~p~~V~GVN~-~~y~~~-~~IVSnASC 239 (334)
-+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||+.++ .|+|++|+|||+ +.++.. .+||+||+|
T Consensus 56 ~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC 129 (344)
T 3tz6_A 56 AETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNC 129 (344)
T ss_dssp TTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCH
T ss_pred CCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCc
Confidence 3444 343 89999999999999999999999999 4565554 257999999999 999763 589999999
Q ss_pred hhhhHHHHHHHHhhhcCeeEEEEEEEeecCCCCC
Q 019933 240 TTNCLAPLAKVVHEEFGILEGLMTTVHATTATQK 273 (334)
Q Consensus 240 TTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~Q~ 273 (334)
+|||++|++++|+++|||+++.|+|+|++|+.-+
T Consensus 130 ~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~ 163 (344)
T 3tz6_A 130 TTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGL 163 (344)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCH
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeccCCCccCh
Confidence 9999999999999999999999999999998743
No 40
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.91 E-value=2.3e-25 Score=218.39 Aligned_cols=153 Identities=20% Similarity=0.135 Sum_probs=120.3
Q ss_pred eeEEEEc-CChhHHHHHH-HHHcCC--CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 90 TKVGING-FGRIGRLVLR-VAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 90 ikVgING-fGrIGR~vlR-al~~~~--d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
+||||+| +|.+|+.++| +|.+++ .++++.+... + -|+--. .+.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG~~~~----------~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-IGVPAP----------NFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TTSBCC----------CSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-cCcCHH----------HhCCCceEEEe
Confidence 4999999 9999999999 999887 4566555431 1 121100 02333333322
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEEec
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIVSN 236 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~~--~--~IVSn 236 (334)
..+++. | .++|+||+|+|.+.+++.++.|+++|+|++||+++++ |.|++|+|||++.++.. + ++|+|
T Consensus 56 ~~~~~~--~--~~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--L--KQLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--H--TTCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--h--ccCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 222332 3 3899999999999999999999999999899999974 47999999999999642 3 46999
Q ss_pred CCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCC
Q 019933 237 ASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTAT 271 (334)
Q Consensus 237 ASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~ 271 (334)
|+|||||++|+|++|+++|||+++.|||+|++|+.
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 166 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGA 166 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEecccc
Confidence 99999999999999999999999999999999987
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.90 E-value=7.7e-25 Score=215.37 Aligned_cols=200 Identities=21% Similarity=0.214 Sum_probs=138.1
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCH-HHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDA-KYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~-~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
++||||.| +|.+|+.++|+|.++|+++|+.+-...... +.+... | +|... ..|..+++.+.+ ++
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~------~-~~~~~------~~~p~~~~~~~v-~~ 84 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDA------A-SWKQT------ETLPETEQDIVV-QE 84 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHH------C-CCCCS------SCCCHHHHTCBC-EE
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHh------c-ccccc------cccccccccceE-Ee
Confidence 58999999 999999999999999999998774210010 001111 0 01000 000000111222 22
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC---CCCCeEEeecCccccC---------------
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS---ADAPMFVVGVNEKTYK--------------- 228 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs---~D~p~~V~GVN~~~y~--------------- 228 (334)
-++++ .|. ++|+||+|+|.+.+++.++.++++|+|.|-+|++. .|+|++|++||++.|.
T Consensus 85 ~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~~i 161 (381)
T 3hsk_A 85 CKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKGGK 161 (381)
T ss_dssp SSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTTCC
T ss_pred Cchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccccc
Confidence 23331 343 89999999999999999999999999544445543 2479999999999885
Q ss_pred CCCCEEecCCchhhhHHHHHHHHhhhcC-eeEEEEEEEeecCCCCCCccCCCCCCCCcccccccccccCCccc-hhh---
Q 019933 229 PNMNIVSNASCTTNCLAPLAKVVHEEFG-ILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGA-AKV--- 303 (334)
Q Consensus 229 ~~~~IVSnASCTTncLAPvlKvL~d~fG-I~~g~mTTVHA~T~~Q~~~D~~~~kd~R~~RaA~~NIIPtsTGA-AkA--- 303 (334)
...++|+||+|+|+|+++.|++|+++|| |+++.|+|+|++|+.|+... . ..+.++.|+||+.+|. .|.
T Consensus 162 ~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~----~---~~~~~~~N~~Py~~~~e~k~~~E 234 (381)
T 3hsk_A 162 KPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPG----V---SGMDILDNIVPYISGEEDKLEWE 234 (381)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC----------C---CHHHHTTCCBCCCTTHHHHHHHH
T ss_pred cCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCC----c---chhhhhcChhhcccchHHHHHHH
Confidence 2356999999999999999999999999 99999999999999987321 1 1246889999999987 565
Q ss_pred hhc-CCCCCC
Q 019933 304 KYR-YPVFAD 312 (334)
Q Consensus 304 v~k-~P~l~~ 312 (334)
+.| ++.++|
T Consensus 235 i~kiL~~l~~ 244 (381)
T 3hsk_A 235 TKKILGGVNA 244 (381)
T ss_dssp HHHHTCEECT
T ss_pred HHHHhhhccc
Confidence 334 565555
No 42
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.90 E-value=3.2e-25 Score=217.89 Aligned_cols=153 Identities=16% Similarity=0.117 Sum_probs=119.6
Q ss_pred ceeEEEEc-CChhHHHHHH-HHHcCC--CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEE-ECCEEEEE
Q 019933 89 NTKVGING-FGRIGRLVLR-VAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLE-INGKLIKV 163 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlR-al~~~~--d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~-inGk~I~V 163 (334)
++||||+| +|.+|+.++| +|.+++ .++++.+... + -|+ ++. +.|+.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG~-----------~~~~~~~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS--------------N-AGG-----------KAPSFAKNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------C-TTS-----------BCCTTCCSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech--------------h-cCC-----------CHHHcCCCceEE
Confidence 36999999 9999999999 988887 4565555331 0 111 111 22322333
Q ss_pred EeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-----CCCeEEeecCccccCCC--C--CEE
Q 019933 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-----DAPMFVVGVNEKTYKPN--M--NIV 234 (334)
Q Consensus 164 ~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-----D~p~~V~GVN~~~y~~~--~--~IV 234 (334)
....+++. | .++|+||+|+|.+.+++.++.|+++|+|++||+++++ |.|++|+|||++.++.. + ++|
T Consensus 58 ~~~~~~~~--~--~~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDD--L--KKCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHH--H--HTCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhH--h--cCCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 22122222 3 3899999999999999999999999999899999974 46999999999999642 3 459
Q ss_pred ecCCchhhhHHHHHHHHhhhcCeeEEEEEEEeecCCC
Q 019933 235 SNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTAT 271 (334)
Q Consensus 235 SnASCTTncLAPvlKvL~d~fGI~~g~mTTVHA~T~~ 271 (334)
+||+|||||++|+|++|+++|||+++.|+|+|++|+.
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 170 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGA 170 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeeccccc
Confidence 9999999999999999999999999999999999987
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.88 E-value=7.8e-24 Score=205.07 Aligned_cols=182 Identities=16% Similarity=0.136 Sum_probs=134.4
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCC--CH-HHHhhhhccccccccCCCeEEEeCCCeEEECCEEEE
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFI--DA-KYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIK 162 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~--d~-~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~ 162 (334)
.| +||+|.| +|.+|+.++|.|.++++++++++-.... .. +.+ ...|..|.+. ..+.
T Consensus 3 ~M-~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~------~~~~p~~~~~-------------~~~~ 62 (337)
T 3dr3_A 3 AM-LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI------SDLHPQLKGI-------------VELP 62 (337)
T ss_dssp CC-EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH------HHHCGGGTTT-------------CCCB
T ss_pred Cc-eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch------HHhCccccCc-------------ccee
Confidence 35 7999999 9999999999999999999988854200 00 000 0111112210 0112
Q ss_pred EEecc-CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC--CC--CC---------------eEEeec
Q 019933 163 VFSKR-DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS--AD--AP---------------MFVVGV 222 (334)
Q Consensus 163 V~~~~-dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs--~D--~p---------------~~V~GV 222 (334)
+ ++- +++++ . .++|+||+|+|.+.+++.++.|+++|+|.|-+|++. +| +| .+|||+
T Consensus 63 v-~~~~~~~~~--~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vygl 138 (337)
T 3dr3_A 63 L-QPMSDISEF--S-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGL 138 (337)
T ss_dssp E-EEESSGGGT--C-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECC
T ss_pred E-eccCCHHHH--h-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEc
Confidence 2 111 33332 1 279999999999999999999999999765566664 23 21 457777
Q ss_pred ---CccccCCCCCEEecCCchhhhHHHHHHHHhh--hcCeeEE-EEEEEeecCCCC-CCccCCCCCCCCccccccccccc
Q 019933 223 ---NEKTYKPNMNIVSNASCTTNCLAPLAKVVHE--EFGILEG-LMTTVHATTATQ-KTVDGPSMKDWRGGRGASQNIIP 295 (334)
Q Consensus 223 ---N~~~y~~~~~IVSnASCTTncLAPvlKvL~d--~fGI~~g-~mTTVHA~T~~Q-~~~D~~~~kd~R~~RaA~~NIIP 295 (334)
|++.+++ .++|+||+|+|+|+++.|++|++ .|+++++ .|+|+|++|+++ +.+|+.| .+.| |++|
T Consensus 139 PEvn~~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~-~~~~-------n~~p 209 (337)
T 3dr3_A 139 AEWCGNKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNS-FCEV-------SLQP 209 (337)
T ss_dssp TTTCCHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTS-GGGC-------SEEE
T ss_pred cccCHHHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccc-cccc-------ceEc
Confidence 9999975 68999999999999999999999 6999999 999999999995 6778777 4554 9999
Q ss_pred CCccch
Q 019933 296 SSTGAA 301 (334)
Q Consensus 296 tsTGAA 301 (334)
+.+|..
T Consensus 210 y~~~~h 215 (337)
T 3dr3_A 210 YGVFTH 215 (337)
T ss_dssp CSTTTC
T ss_pred cCcccc
Confidence 999874
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.75 E-value=4e-19 Score=173.21 Aligned_cols=178 Identities=12% Similarity=0.088 Sum_probs=132.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||.| +|.+|+.++|+|.++|+++|+.++.. .... -+|+..|..|. +.+.+ ++.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~-~~aG-----~~~~~~~p~~~---------------~~l~~-~~~ 70 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR-TYAG-----KKLEEIFPSTL---------------ENSIL-SEF 70 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS-TTTT-----SBHHHHCGGGC---------------CCCBC-BCC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCc-cccc-----CChHHhChhhc---------------cCceE-EeC
Confidence 48999999 99999999999999999999999863 1111 12344454443 11122 112
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC---CC--------------------CeEEeecCc
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DA--------------------PMFVVGVNE 224 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~---D~--------------------p~~V~GVN~ 224 (334)
|++++ | .++|+||+|+|...+++.++.+ +|+ +||+.+++ +. |..++++|.
T Consensus 71 ~~~~~-~--~~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~ 143 (351)
T 1vkn_A 71 DPEKV-S--KNCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHR 143 (351)
T ss_dssp CHHHH-H--HHCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHH
T ss_pred CHHHh-h--cCCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCH
Confidence 23322 2 3799999999999999999877 777 68988873 22 455566699
Q ss_pred cccCCCCCEEecCCchhhhHHHHHHHHhhhcCee--EEEEEEEeecCCCCCC-ccCCCCCCCCcccccccccccCCccch
Q 019933 225 KTYKPNMNIVSNASCTTNCLAPLAKVVHEEFGIL--EGLMTTVHATTATQKT-VDGPSMKDWRGGRGASQNIIPSSTGAA 301 (334)
Q Consensus 225 ~~y~~~~~IVSnASCTTncLAPvlKvL~d~fGI~--~g~mTTVHA~T~~Q~~-~D~~~~kd~R~~RaA~~NIIPtsTGAA 301 (334)
+.+.. .++|+||+|+|+|+.+.|++|+++++|+ ++.++|++++|+.++- .+..+ ...+..|++|+..+.-
T Consensus 144 e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~------~~e~~~n~~~y~~~~h 216 (351)
T 1vkn_A 144 EEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYL------FSEVNESLRPYNVAKH 216 (351)
T ss_dssp HHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGB------HHHHTTCCEECSCSCC
T ss_pred HHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccc------hhHHhcccccCCcccc
Confidence 98875 5899999999999999999999999999 9999999999999763 33322 1245678999888754
Q ss_pred h
Q 019933 302 K 302 (334)
Q Consensus 302 k 302 (334)
+
T Consensus 217 ~ 217 (351)
T 1vkn_A 217 R 217 (351)
T ss_dssp T
T ss_pred c
Confidence 3
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.18 E-value=4.8e-06 Score=79.31 Aligned_cols=153 Identities=18% Similarity=0.216 Sum_probs=93.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHc-CCCceEEEEeCCCCCHHH-HhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 89 NTKVGINGFGRIGRLVLRVAAF-RDDVDVVAVNDPFIDAKY-MAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~-~~d~eiVAIND~~~d~~~-~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
++||||.|+|.||+.+++.+.+ .+++++++|-|. +++. ..-+.+ .||. .. ..++ + . .++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~--~~~~~~~~~a~---~~g~---~~-~~~~--~----e--~ll-- 64 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGI--DAASDGLARAQ---RMGV---TT-TYAG--V----E--GLI-- 64 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECS--CTTCHHHHHHH---HTTC---CE-ESSH--H----H--HHH--
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeC--ChhhhHHHHHH---HcCC---Cc-ccCC--H----H--HHH--
Confidence 5899999999999999999976 788999999985 3322 111110 1111 00 0000 0 0 000
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHc--CCCEEEEeCCCCCCCeEEeecCccccCC--CCCEEecCCchhh
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKG--GAKKVVISAPSADAPMFVVGVNEKTYKP--NMNIVSNASCTTN 242 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~a--GaKkVIISaPs~D~p~~V~GVN~~~y~~--~~~IVSnASCTTn 242 (334)
++..| .++|+||+|||.....+.+...+++ |. .||.-.|..-.|..++.+|.+.... ...+++++.|
T Consensus 65 ---~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g~--- 135 (312)
T 1nvm_B 65 ---KLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQ--- 135 (312)
T ss_dssp ---HSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHHH---
T ss_pred ---hccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCcccccccccCccCHHHHHhccCCcEEEeCCc---
Confidence 11112 2799999999988888888888888 86 3444344322466666778777532 1246666666
Q ss_pred hHHHHHHHHhhhcCeeEE-EEEEEeecC
Q 019933 243 CLAPLAKVVHEEFGILEG-LMTTVHATT 269 (334)
Q Consensus 243 cLAPvlKvL~d~fGI~~g-~mTTVHA~T 269 (334)
+..|++..+.+.|..... .+.++.+.+
T Consensus 136 ~~ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 136 ATIPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred ccchHHHHhhhhccchhHhHhhhhhccc
Confidence 456888888888876533 455555443
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.08 E-value=4.4e-06 Score=79.12 Aligned_cols=89 Identities=25% Similarity=0.243 Sum_probs=64.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+.+++.+.+.+++++|++-|+. .+. ++. -| +.+ ..|
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~--~~~------------~~~-------------~g--v~~--~~d 51 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR--ATL------------DTK-------------TP--VFD--VAD 51 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS--SCC------------SSS-------------SC--EEE--GGG
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC--HHH------------hhc-------------CC--Cce--eCC
Confidence 58999999999999999999988889999998851 110 000 01 122 123
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++- .++|+||+||+.....+.+...+++|. .||++.|.
T Consensus 52 ~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 52 VDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred HHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 33332 379999999999988898988999885 57777764
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.93 E-value=8.4e-06 Score=76.65 Aligned_cols=89 Identities=19% Similarity=0.221 Sum_probs=61.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+.+++.+.+.++++|++|-|. +++.... +|. .... ..+
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~g~------------------~~~~--~~~ 59 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------ELQ------------------PFRV--VSD 59 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------CCT------------------TSCE--ESS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------cCC------------------CcCC--HHH
Confidence 5899999999999999999988888999999885 3332110 110 0000 112
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
..+. .++|+|+.||+.....+.+...+++|. .||...|
T Consensus 60 l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~ekP 97 (304)
T 3bio_A 60 IEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADSFD 97 (304)
T ss_dssp GGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEECCC
T ss_pred HHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEECCC
Confidence 2222 378999999999999999999999885 5565545
No 48
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.71 E-value=6e-05 Score=70.49 Aligned_cols=95 Identities=23% Similarity=0.256 Sum_probs=67.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
|++||||+|+|.||+..++.+.+.+++++++|-|+ +++....+.+ .||. . . .
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~--~------------------~ 53 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG---AYGC---E--V------------------R 53 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTC---E--E------------------C
T ss_pred CceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH---HhCC---C--c------------------C
Confidence 67899999999999999999988888999999995 5654433322 0110 0 1 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 54 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 96 (331)
T 4hkt_A 54 TIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKPI 96 (331)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecCC
Confidence 11111 01226899999999999999999999998 678887773
No 49
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.70 E-value=5.2e-05 Score=71.41 Aligned_cols=97 Identities=28% Similarity=0.327 Sum_probs=67.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
|++||||+|+|.||+..++.+.+.+++++++|-|. +++....+.+ .||. .... .
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~~~~------------------~ 54 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV---EKAY------------------K 54 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC---SEEE------------------S
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC---Ccee------------------C
Confidence 67899999999999999999988888999999985 5554433322 1110 0001 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 55 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 97 (344)
T 3ezy_A 55 DPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKPL 97 (344)
T ss_dssp SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred CHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECCC
Confidence 11111 01126899999999999999999999998 568887773
No 50
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.59 E-value=0.00013 Score=68.71 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=68.3
Q ss_pred CceeEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~-~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||+|+|.||+..++.+. ..+++++++|-|. +++....+.+ .||. ... ++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~---~~g~---~~~---------------~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVE---QYQL---NAT---------------VY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHH---HTTC---CCE---------------EE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC---CCe---------------ee--
Confidence 6789999999999999999998 6678999999985 5554433221 1221 000 11
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ -.+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP~ 99 (344)
T 3mz0_A 56 PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKPL 99 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCCC
Confidence 111111 01126899999999999999999999999 578887773
No 51
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.58 E-value=0.00011 Score=69.98 Aligned_cols=93 Identities=20% Similarity=0.305 Sum_probs=65.9
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++++...++++||||-|. +++..+-. | .+. .++ .
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~--~-------~~~----------------~~~--~ 55 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKRD--F-------PDA----------------EVV--H 55 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHHH--C-------TTS----------------EEE--S
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHhh--C-------CCC----------------ceE--C
Confidence 489999999999996 6888877788999999995 55442211 1 111 111 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+.||+.....+.+...+++| |.|++--|-
T Consensus 56 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 98 (358)
T 3gdo_A 56 ELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKPM 98 (358)
T ss_dssp STHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecCC
Confidence 12211 11237899999999999999999999999 678887773
No 52
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.58 E-value=0.00017 Score=68.26 Aligned_cols=92 Identities=23% Similarity=0.344 Sum_probs=65.8
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++++.+.++++||||-|. +++...- + +.+. .++ .
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~~--~-------~~~~----------------~~~--~ 57 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVHA--D-------WPAI----------------PVV--S 57 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHT--T-------CSSC----------------CEE--S
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHh--h-------CCCC----------------ceE--C
Confidence 589999999999996 7888888888999999995 5554320 1 1110 011 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
|.+++- .+.++|+|+-||+.....+.+...+++| |.|++-.|
T Consensus 58 ~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 58 DPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp CHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 111110 1236899999999999999999999999 67888777
No 53
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.57 E-value=0.00012 Score=69.90 Aligned_cols=94 Identities=22% Similarity=0.290 Sum_probs=67.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|.||+..++.+...++++|++|-|. +++.....-+| |. . ++ .|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~----g~-----~---------------~~--~~ 56 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQK----GL-----K---------------IY--ES 56 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTT----TC-----C---------------BC--SC
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhc----CC-----c---------------ee--CC
Confidence 5899999999999999999988888999999985 55544322111 11 0 00 01
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 57 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP~ 98 (359)
T 3e18_A 57 YEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKPV 98 (359)
T ss_dssp HHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCCC
Confidence 1111 01236899999999999999999999998 568887773
No 54
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.54 E-value=2.4e-05 Score=74.36 Aligned_cols=157 Identities=22% Similarity=0.287 Sum_probs=85.5
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
+|++||+|+| +|++||.+++++.+.++++||++-|.. +.++ .-.|. |.+.+ +.-.| +.++
T Consensus 19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~-~~~~----~G~d~--gel~G---------~~~~g--v~v~- 79 (288)
T 3ijp_A 19 PGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRK-GSSF----VDKDA--SILIG---------SDFLG--VRIT- 79 (288)
T ss_dssp --CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCT-TCTT----TTSBG--GGGTT---------CSCCS--CBCB-
T ss_pred cCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC-Cccc----cccch--HHhhc---------cCcCC--ceee-
Confidence 3468999999 999999999999999999999998852 1110 00111 11110 00001 1221
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE-eCCCCCCCeEEeecCcccc---C---CCCCEE--ec
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI-SAPSADAPMFVVGVNEKTY---K---PNMNIV--SN 236 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII-SaPs~D~p~~V~GVN~~~y---~---~~~~IV--Sn 236 (334)
.|.+++- .++|+|||+|......+.+...++.|.. ||| |.... .+.+ . .+..++ +|
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vViGTTG~~----------~e~~~~L~~aa~~~~~~~a~N 144 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HIIGTTGFS----------KTEEAQIADFAKYTTIVKSGN 144 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCCCC----------HHHHHHHHHHHTTSEEEECSC
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCCCC----------HHHHHHHHHHhCcCCEEEECC
Confidence 2333221 1689999999766666777777888874 444 32221 1111 1 122333 34
Q ss_pred CCchhhhHHHHHHHHhhhcC-eeEEEEEEEeecCCCCCCccCCCCC
Q 019933 237 ASCTTNCLAPLAKVVHEEFG-ILEGLMTTVHATTATQKTVDGPSMK 281 (334)
Q Consensus 237 ASCTTncLAPvlKvL~d~fG-I~~g~mTTVHA~T~~Q~~~D~~~~k 281 (334)
-|=-.|-|.-+++-+-+.|+ ==.+.|.-.|-- || +|.|+|.
T Consensus 145 ~SiGv~ll~~l~~~aa~~l~~~~dieIiE~HH~---~K-~DaPSGT 186 (288)
T 3ijp_A 145 MSLGVNLLANLVKRAAKALDDDFDIEIYEMHHA---NK-VDSPSGT 186 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHSCTTSEEEEEEEECT---TC-CCSSCHH
T ss_pred CcHHHHHHHHHHHHHHHhcCCCCCEEEEEccCC---CC-CCCCCHH
Confidence 55556666555555554443 002334445542 33 6788763
No 55
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.54 E-value=0.00018 Score=68.03 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=68.4
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
.|++||||+|+|.||+..++.+...+++++|+|-|+ +++....+.+ .||. .. .
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~---~~-~------------------ 55 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC---AG-D------------------ 55 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC---CC-C------------------
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC---CC-c------------------
Confidence 346899999999999999999988888999999985 5554433321 1110 00 0
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 99 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKPI 99 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccCC
Confidence 111111 01236899999999999999999999998 568887773
No 56
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.53 E-value=6.5e-05 Score=69.48 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=30.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
+||+|+|+|++||.+++++.++++ +||++-|.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~ 35 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIEN 35 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEec
Confidence 799999999999999999999998 99998875
No 57
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.49 E-value=0.00018 Score=68.08 Aligned_cols=97 Identities=21% Similarity=0.257 Sum_probs=65.9
Q ss_pred CceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||+|+|.||+ ..++++...++++||+|-|+. ..+..+-. ||.. +. .++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~------~~~~-~~----------------~~~-- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAP------FKEK-GV----------------NFT-- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHH------HHTT-TC----------------EEE--
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHh------hCCC-CC----------------eEE--
Confidence 679999999999998 678888777889999999862 12222111 1110 00 111
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (349)
T 3i23_A 55 ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKPF 98 (349)
T ss_dssp SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECCC
Confidence 1222211 1236899999999999999999999999 678887773
No 58
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.47 E-value=0.00014 Score=68.13 Aligned_cols=97 Identities=20% Similarity=0.128 Sum_probs=66.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCC--CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRD--DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~--d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||+|+|.||+..++.+...+ ++++|||-|. +++....+.+ .||. ....
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a~---~~~~---~~~~----------------- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQ---KHDI---PKAY----------------- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHHH---HHTC---SCEE-----------------
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHHH---HcCC---Cccc-----------------
Confidence 6789999999999999999987655 4899999985 5554333221 1211 0001
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ -.+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 56 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP~ 99 (334)
T 3ohs_X 56 -GSYEEL-AKDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKPM 99 (334)
T ss_dssp -SSHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred -CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCC
Confidence 011111 01236899999999999999999999999 678887774
No 59
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.45 E-value=0.00022 Score=66.87 Aligned_cols=95 Identities=21% Similarity=0.162 Sum_probs=65.9
Q ss_pred eeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+||||+|+|+||+. +++++.+.++++||||-|+ +++....+-+ .||. ...+. |
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~~~y~------------------d 77 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMAD---RFSV---PHAFG------------------S 77 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHH---HHTC---SEEES------------------S
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---CeeeC------------------C
Confidence 89999999999985 5788888889999999995 6654333221 1210 10110 1
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|.|+=||+.....+.+...+++| |-|++--|-
T Consensus 78 ~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 119 (350)
T 4had_A 78 YEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVCEKPL 119 (350)
T ss_dssp HHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred HHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEEeCCc
Confidence 1110 01236899999999999999999999998 467777773
No 60
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.45 E-value=0.00054 Score=67.27 Aligned_cols=100 Identities=19% Similarity=0.076 Sum_probs=66.7
Q ss_pred ceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+ ..++.+.+.++++||+|-|. +.+....+.+ .||.-... +.+ ..
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a~---~~g~~~~~---------------~~~--~~ 140 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAA---EYGVDPRK---------------IYD--YS 140 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHHH---HTTCCGGG---------------EEC--SS
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCccc---------------ccc--cC
Confidence 58999999999997 88998887778999999995 5554332221 12210000 011 11
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 141 ~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKPl 183 (433)
T 1h6d_A 141 NFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKPM 183 (433)
T ss_dssp SGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred CHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCCC
Confidence 222221 12368999999999999999999999984 57776664
No 61
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.44 E-value=0.00012 Score=68.64 Aligned_cols=155 Identities=22% Similarity=0.299 Sum_probs=85.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||+|+| +|++||.+++++.+.++++||++-|...+. + .|+-.+++. + +. .| +.++ .
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~-~----------~G~d~gel~---g--~~-~g--v~v~--~ 65 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP-Q----------LGQDAGAFL---G--KQ-TG--VALT--D 65 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT-T----------TTSBTTTTT---T--CC-CS--CBCB--C
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc-c----------ccccHHHHh---C--CC-CC--ceec--C
Confidence 38999999 999999999999999999999987742111 0 111111100 0 00 01 1111 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCcccc------CCCCCEE--ecCCc
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTY------KPNMNIV--SNASC 239 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y------~~~~~IV--SnASC 239 (334)
|.+++- .++|+|||+|..-...+.+...++.|.+ ||+.... .+.+.+ -.+..++ +|-|=
T Consensus 66 dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVigTTG---------~s~~~~~~L~~aa~~~~vv~a~N~s~ 132 (272)
T 4f3y_A 66 DIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVIGTTG---------FSEPQKAQLRAAGEKIALVFSANMSV 132 (272)
T ss_dssp CHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEECCCC---------CCHHHHHHHHHHTTTSEEEECSCCCH
T ss_pred CHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEEECCC---------CCHHHHHHHHHHhccCCEEEECCCCH
Confidence 222110 1579999999766666777777888874 4553321 111111 0122333 34455
Q ss_pred hhhhHHHHHHHHhhhcC-eeEEEEEEEeecCCCCCCccCCCCC
Q 019933 240 TTNCLAPLAKVVHEEFG-ILEGLMTTVHATTATQKTVDGPSMK 281 (334)
Q Consensus 240 TTncLAPvlKvL~d~fG-I~~g~mTTVHA~T~~Q~~~D~~~~k 281 (334)
-.|-|.-+++-.-+.|+ =-.+.|.-.|-- || +|.|+|.
T Consensus 133 Gv~l~~~~~~~aa~~l~~~~diei~E~HH~---~K-~DaPSGT 171 (272)
T 4f3y_A 133 GVNVTMKLLEFAAKQFAQGYDIEIIEAHHR---HK-VDAPSGT 171 (272)
T ss_dssp HHHHHHHHHHHHHHHTSSSCEEEEEEEECT---TC-CSSSCHH
T ss_pred HHHHHHHHHHHHHHhcCcCCCEEEEEecCC---CC-CCCCCHH
Confidence 56666666666655553 113445555543 33 6788863
No 62
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.41 E-value=0.00029 Score=66.19 Aligned_cols=95 Identities=20% Similarity=0.321 Sum_probs=67.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|.||+..++.+.+.+++++++|-|. +++....+.+ .|| +. ++ .|
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g-----~~---------------~~--~~ 56 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG-----AE---------------AV--AS 56 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT-----CE---------------EE--SS
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC-----Cc---------------ee--CC
Confidence 4799999999999999999998888999999985 5554433321 111 01 11 11
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 57 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 98 (344)
T 3euw_A 57 PDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKPI 98 (344)
T ss_dssp HHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSCS
T ss_pred HHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECCC
Confidence 1111 11237899999999999999999999998 567887773
No 63
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.40 E-value=0.00014 Score=68.57 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=63.3
Q ss_pred CceeEEEEcCChhHHH-HHH-HHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRL-VLR-VAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~-vlR-al~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||+|+|+||+. .++ ++...++++|++|-|+ +++.....-+ +.+. .++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~--~~~~~~~~~~-------~~~~----------------~~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRR--HAKPEEQAPI-------YSHI----------------HFT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECS--SCCGGGGSGG-------GTTC----------------EEE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcC--CHhHHHHHHh-------cCCC----------------ceE-
Confidence 6789999999999985 677 5466678999999986 3222111111 1110 111
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 98 (345)
T 3f4l_A 55 -SDLDEV-LNDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKPF 98 (345)
T ss_dssp -SCTHHH-HTCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 122221 01236899999999999999999999999 567776664
No 64
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.39 E-value=0.00023 Score=66.87 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=66.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+..++.+.+.+++++++|-|. +++....+.+ .||. . . ++ .|
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~---~-~---------------~~--~~ 58 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAK---ELAI---P-V---------------AY--GS 58 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHH---HTTC---C-C---------------CB--SS
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHH---HcCC---C-c---------------ee--CC
Confidence 5899999999999999999998888999999985 4443322221 1111 0 0 00 01
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 59 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP~ 100 (330)
T 3e9m_A 59 YEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKPF 100 (330)
T ss_dssp HHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSSC
T ss_pred HHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 1111 01226899999999999999999999998 567887773
No 65
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.38 E-value=0.00016 Score=69.67 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=58.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC--------CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD--------DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKL 160 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~--------d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~ 160 (334)
++||||.|+|.||+.+++.+.+++ +++|++|-|. +++ + . .+ ++ . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~--~~~------~-~--~~-~~-------~-~------- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR--DPR------K-P--RA-IP-------Q-E------- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS--CTT------S-C--CS-SC-------G-G-------
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC--CHH------H-h--hc-cC-------c-c-------
Confidence 489999999999999999998876 6899999885 221 0 0 00 10 0 0
Q ss_pred EEEEeccCCCCCCCCccCccEEEeccCCCC-CHHHHHHHHHcCCCEEEEe
Q 019933 161 IKVFSKRDPAEIPWGDYGVDYVVESSGVFT-TIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 161 I~V~~~~dP~~i~W~~~gvDiVvEsTG~f~-t~e~a~~hl~aGaKkVIIS 209 (334)
.++ .|++++- ++|+|+||||... ..+.+.+.|++|. -|++
T Consensus 56 -~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVt 96 (332)
T 2ejw_A 56 -LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLIT 96 (332)
T ss_dssp -GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEE
T ss_pred -ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEE
Confidence 011 2455543 7899999999763 3567777889886 3454
No 66
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.36 E-value=0.00014 Score=69.07 Aligned_cols=93 Identities=18% Similarity=0.286 Sum_probs=65.0
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++++...++++||||-|+ +++..+ . +|.+. .++ .
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~------~---~~~~~----------------~~~--~ 55 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVER--SKELSK------E---RYPQA----------------SIV--R 55 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECS--SCCGGG------T---TCTTS----------------EEE--S
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHH------H---hCCCC----------------ceE--C
Confidence 489999999999996 7888888888999999986 332211 0 11111 111 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 56 ~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 98 (362)
T 3fhl_A 56 SFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKPF 98 (362)
T ss_dssp CSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred CHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 222211 1236899999999999999999999998 578887773
No 67
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.36 E-value=0.00072 Score=62.53 Aligned_cols=33 Identities=33% Similarity=0.559 Sum_probs=29.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
|||+|+| +|++||.+++++.+++++++|++-|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 4999999 69999999999988888999999874
No 68
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.35 E-value=0.00015 Score=68.03 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=64.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+..++.+...+++++++|-|. +++....+.+ .|| + . .++ .|
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~--~~~~~~~~a~---~~~-------------~----~--~~~--~~ 58 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSR--TLESAQAFAN---KYH-------------L----P--KAY--DK 58 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECS--CSSTTCC------CCC-------------C----S--CEE--SC
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---HcC-------------C----C--ccc--CC
Confidence 4899999999999999999988788999999885 2221111100 000 0 0 011 11
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++- .+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 59 ~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP~ 100 (329)
T 3evn_A 59 LEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKPF 100 (329)
T ss_dssp HHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccCC
Confidence 21111 1237899999999999999999999998 567887773
No 69
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.35 E-value=0.00026 Score=68.02 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=30.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC------CCceEEEEeCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR------DDVDVVAVNDP 122 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~------~d~eiVAIND~ 122 (334)
++||||.|+|.||+.+++.+.++ .+++||+|-|.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 58999999999999999999875 57999999885
No 70
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.35 E-value=0.00061 Score=63.46 Aligned_cols=94 Identities=22% Similarity=0.276 Sum_probs=65.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||+|+|.||+..++.+.+.+++++|+|-|. +++....+.+ .||. . .++ .|.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~~---~~~~----~---------------~~~--~~~ 55 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFAS---RYQN----I---------------QLF--DQL 55 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHGG---GSSS----C---------------EEE--SCH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC----C---------------eEe--CCH
Confidence 799999999999999999988878999999985 5554332221 1110 0 111 122
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
+++- +.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 56 ~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EKP~ 95 (325)
T 2ho3_A 56 EVFF--KSSFDLVYIASPNSLHFAQAKAALSAG-KHVILEKPA 95 (325)
T ss_dssp HHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSC
T ss_pred HHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEecCC
Confidence 2221 237899999999998889999889988 457776663
No 71
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.34 E-value=0.00028 Score=67.17 Aligned_cols=98 Identities=28% Similarity=0.261 Sum_probs=67.2
Q ss_pred CceeEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~-~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||+|+|.||+..++.+. ..+++++|+|-|+ +++....+.+ .||. .+ .++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~---~~---------------~~~-- 76 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI--VAGRAQAALD---KYAI---EA---------------KDY-- 76 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS--STTHHHHHHH---HHTC---CC---------------EEE--
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH---HhCC---CC---------------eee--
Confidence 4689999999999999999998 6678999999985 4433322221 1110 00 011
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ -.+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 77 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKPl 120 (357)
T 3ec7_A 77 NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKPL 120 (357)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecCc
Confidence 111111 01226899999999999999999999999 678887774
No 72
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.34 E-value=0.00029 Score=67.23 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=65.5
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++++.+.++++||||-|. +++...- + +.+.. ++ .
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~~~~----------------~~--~ 57 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LPDVT----------------VI--A 57 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CTTSE----------------EE--S
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CCCCc----------------EE--C
Confidence 589999999999996 7888888888999999995 5554321 1 11111 11 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKPl 100 (364)
T 3e82_A 58 SPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKPF 100 (364)
T ss_dssp CHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCCC
Confidence 111110 1236899999999999999999999999 567776663
No 73
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.34 E-value=0.00032 Score=64.84 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=65.8
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++.+.+.+++++++|-|. +++....+.+ .||. .. . .
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~---~~-~------------------~ 58 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI---MP-F------------------D 58 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC---CB-C------------------S
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---CC-c------------------C
Confidence 589999999999996 8898888788999999995 6654433321 1110 00 0 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++- + ++|+|+-||+.....+.+...+++|. .|++--|.
T Consensus 59 ~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 59 SIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp CHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred CHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 111110 1 68999999999999999999999984 57776674
No 74
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.32 E-value=0.00036 Score=54.08 Aligned_cols=98 Identities=19% Similarity=0.243 Sum_probs=61.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
|++||.|.|.|.||+.+++.|.+++..+++++.. +++....+..+ | -.. + .....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~----~---~~~-------~--------~~d~~ 58 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRM----G---VAT-------K--------QVDAK 58 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTT----T---CEE-------E--------ECCTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhC----C---CcE-------E--------EecCC
Confidence 4469999999999999999998886577776653 44444333210 0 000 0 00011
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISa 210 (334)
+++.+.-.-.++|+||+|+|.......+...++.|++++.++.
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 1111100002789999999988877777888889997765543
No 75
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.32 E-value=0.00053 Score=64.09 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=65.0
Q ss_pred ceeEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~-~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.||+..++.+. ..+++++|+|-|. +++....+.+ .+|. . . ++ .
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~---~-~---------------~~--~ 61 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV---E-T---------------TY--T 61 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC---S-E---------------EE--S
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC---C-c---------------cc--C
Confidence 479999999999999999988 6678999999985 5554322221 1110 0 0 11 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 62 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp~ 104 (346)
T 3cea_A 62 NYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKPL 104 (346)
T ss_dssp CHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred CHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCCC
Confidence 11111 01126899999999998889999899998 466665563
No 76
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.31 E-value=0.00041 Score=65.68 Aligned_cols=99 Identities=14% Similarity=0.196 Sum_probs=66.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+.+++.+.+.+++++|+|-|. +++....+.+ .||... .. .++ .|
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~---~~~~~~-~~---------------~~~--~~ 62 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFAT---ANNYPE-ST---------------KIH--GS 62 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTCCT-TC---------------EEE--SS
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCC-CC---------------eee--CC
Confidence 4899999999999999999988888999999995 5554332221 122100 00 111 11
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 63 ~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~V~~EKP~ 104 (362)
T 1ydw_A 63 YESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKG-KHILLEKPV 104 (362)
T ss_dssp HHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTT-CEEEECSSC
T ss_pred HHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCC-CeEEEecCC
Confidence 1111 01126899999999998889999889988 467776663
No 77
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.30 E-value=9.4e-05 Score=70.79 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=30.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC-------CceEEEEeCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD-------DVDVVAVNDP 122 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~-------d~eiVAIND~ 122 (334)
++||||.|+|.||+.+++.+.+++ +++|++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999997754 5899999885
No 78
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.29 E-value=0.00021 Score=64.06 Aligned_cols=132 Identities=20% Similarity=0.208 Sum_probs=77.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+||||+|+|+||+.+++.+.+ ++++++++-|.. .+ . +. + ..++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~--~~--------------------~--~~----------~--~~~~ 43 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVR--GE--------------------H--EK----------M--VRGI 43 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSS--CC--------------------C--TT----------E--ESSH
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecC--cc--------------------h--hh----------h--cCCH
Confidence 489999999999999999884 579999988741 00 0 00 1 1233
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC-CCCeEEeecCccccC-CCCCEE--ecCCchhhhHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA-DAPMFVVGVNEKTYK-PNMNIV--SNASCTTNCLA 245 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~-D~p~~V~GVN~~~y~-~~~~IV--SnASCTTncLA 245 (334)
+++-- .++|+|++|++.....+.+...+++|. .||+..|.. +.+-+...+- +... ....++ ++.+...
T Consensus 44 ~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~~---- 115 (236)
T 2dc1_A 44 DEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGGL---- 115 (236)
T ss_dssp HHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSCH----
T ss_pred HHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccCh----
Confidence 32211 378999999998888888888899887 344444421 1110000000 0000 012222 2333332
Q ss_pred HHHHHHhhhcCeeEEEEEEEeec
Q 019933 246 PLAKVVHEEFGILEGLMTTVHAT 268 (334)
Q Consensus 246 PvlKvL~d~fGI~~g~mTTVHA~ 268 (334)
..++.... |+++..+++.|..
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 116 DAIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHHhhc--cccEEEEEEEcCh
Confidence 33444443 8999999999886
No 79
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.28 E-value=0.00083 Score=65.86 Aligned_cols=102 Identities=27% Similarity=0.316 Sum_probs=68.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCeEEECCEEEEEEe--
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKVFS-- 165 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~L~inGk~I~V~~-- 165 (334)
++||||+|+|.||+..++++...++++||+|-|+ +++....+.+ +. .||. +. ..++.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~~----------------~~~~~~~ 79 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-KP----------------AKVFGNG 79 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-CC----------------CEEECSS
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-CC----------------CceeccC
Confidence 5899999999999999999988888999999995 5654433321 10 0110 00 01111
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
+.|.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 80 ~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP~ 124 (444)
T 2ixa_A 80 NDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVSG 124 (444)
T ss_dssp TTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCCC
T ss_pred CCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCCC
Confidence 1122221 122368999999999999999999999984 67776664
No 80
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.25 E-value=0.00051 Score=63.80 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=63.0
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.||+. +++.+.+.+++++|+|-|. +++....+.+ .+|. . ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~---~-----------------~~--~ 57 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP--TRAKALPICE---SWRI---P-----------------YA--D 57 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS--SCTTHHHHHH---HHTC---C-----------------BC--S
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC---C-----------------cc--C
Confidence 489999999999996 8898887778999999885 3322211111 0110 0 00 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
+.+.+ +.++|+|+.||+.....+.+...+++|. .|++-.|.
T Consensus 58 ~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP~ 98 (319)
T 1tlt_A 58 SLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKPL 98 (319)
T ss_dssp SHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESSS
T ss_pred cHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCCC
Confidence 12222 2378999999998888888888899884 56776663
No 81
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.24 E-value=0.00034 Score=66.64 Aligned_cols=96 Identities=20% Similarity=0.219 Sum_probs=66.2
Q ss_pred ceeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|+||+. .++++.+.+++++++|-|+ +++....+.+ .|| .. .++ .
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~---~~----------------~~~--~ 58 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR---FIS---DI----------------PVL--D 58 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG---TSC---SC----------------CEE--S
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH---hcC---CC----------------ccc--C
Confidence 489999999999995 8899988888999999995 6654433321 011 10 011 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 59 ~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 101 (359)
T 3m2t_A 59 NVPAM-LNQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKPP 101 (359)
T ss_dssp SHHHH-HHHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSCS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 11111 01236899999999988889999999998 467777773
No 82
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.23 E-value=0.00042 Score=65.74 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=66.4
Q ss_pred ceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.||+ ..++++.+.++++|++|-|. +++....+.+ .||. . .+ .
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g~---~-----------------~~--~ 79 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RFGG---E-----------------PV--E 79 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HHCS---E-----------------EE--E
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---HcCC---C-----------------Cc--C
Confidence 58999999999998 78899988888999999885 5544333221 1110 0 01 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
+.+++ ..+.++|+|+-||+.....+.+...+++|. .|++--|.
T Consensus 80 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP~ 122 (350)
T 3rc1_A 80 GYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKPL 122 (350)
T ss_dssp SHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESSS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCCC
Confidence 11111 012368999999999999999999999984 57777773
No 83
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.22 E-value=0.00056 Score=63.56 Aligned_cols=93 Identities=18% Similarity=0.204 Sum_probs=65.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
++||||+|+|+||+..++.+.+.+++++|+|-|. +++....+. + . +.++ .+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~~~-----------------~-~-------~~~~--~~ 60 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLALVP-----------------P-G-------CVIE--SD 60 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTTCC-----------------T-T-------CEEE--SS
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHH-----------------h-h-------Cccc--CC
Confidence 4799999999999999999988878999999885 454322111 0 1 1121 12
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++- .+.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 61 ~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP~ 102 (315)
T 3c1a_A 61 WRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKPL 102 (315)
T ss_dssp THHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred HHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCCC
Confidence 22210 1237899999999998889999889998 467776664
No 84
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.20 E-value=0.001 Score=62.03 Aligned_cols=95 Identities=20% Similarity=0.267 Sum_probs=63.5
Q ss_pred CceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||+|+|.||+ ..++.+.+.++++++ |-|. +++....+.+ .||. .... .
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~---~~~~----------------~- 54 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV---SATC----------------T- 54 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC---CCCC----------------S-
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC---Cccc----------------c-
Confidence 568999999999998 488988877789999 8885 5554433221 1110 0000 0
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
...+.+ +.++|+|+.||+.....+.+...+++|. .|++-.|.
T Consensus 55 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP~ 96 (323)
T 1xea_A 55 DYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKPL 96 (323)
T ss_dssp STTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESCS
T ss_pred CHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCCC
Confidence 111122 2378999999999888888888899884 46676663
No 85
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.19 E-value=0.0003 Score=66.47 Aligned_cols=88 Identities=19% Similarity=0.236 Sum_probs=64.1
Q ss_pred ceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.||+ ..++++.+.++++||||-|+ +.+ + + | +.++ .
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~--~~~------~----~------------------g--~~~~--~ 70 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASR--HGT------V----E------------------G--VNSY--T 70 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECS--SCC------C----T------------------T--SEEE--S
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeC--Chh------h----c------------------C--CCcc--C
Confidence 58999999999999 79999998889999999986 211 0 0 0 0111 1
Q ss_pred CCCCCCCCc-cCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGD-YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~-~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+ .++|+|+-||+.....+.+...+++| |.|++--|.
T Consensus 71 ~~~~l-l~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP~ 114 (330)
T 4ew6_A 71 TIEAM-LDAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKPP 114 (330)
T ss_dssp SHHHH-HHHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred CHHHH-HhCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCCC
Confidence 11111 011 36899999999988889999999999 678887774
No 86
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.12 E-value=0.00026 Score=66.29 Aligned_cols=98 Identities=17% Similarity=0.109 Sum_probs=66.4
Q ss_pred CC-ceeEEEEcCChhHHHHHHHHHcCCC-------ceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECC
Q 019933 87 DG-NTKVGINGFGRIGRLVLRVAAFRDD-------VDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEING 158 (334)
Q Consensus 87 ~M-~ikVgINGfGrIGR~vlRal~~~~d-------~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inG 158 (334)
.| ++||||+|+|+||+.-++++...++ .+||||-|+ +++....+.+ .||. ..
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~---~~g~---~~------------ 62 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG---KLGW---ST------------ 62 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH---HHTC---SE------------
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH---HcCC---Cc------------
Confidence 46 5899999999999988887765432 489999995 6654433321 1110 10
Q ss_pred EEEEEEeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 159 KLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 159 k~I~V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++| |-|++--|-
T Consensus 63 ----~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKPl 108 (390)
T 4h3v_A 63 ----TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKPL 108 (390)
T ss_dssp ----EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred ----cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecCc
Confidence 11 111111 11237899999999999999999999999 578887774
No 87
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.06 E-value=0.00051 Score=66.18 Aligned_cols=96 Identities=22% Similarity=0.166 Sum_probs=65.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC--------CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR--------DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKL 160 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~--------~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~ 160 (334)
++||||+|+|+||+.-++++.+. ++++||||-|+ +++....+.+ .|| ......
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~---~~~---~~~~y~----------- 86 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA---KLG---AEKAYG----------- 86 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH---HHT---CSEEES-----------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH---HcC---CCeEEC-----------
Confidence 68999999999999888877642 35899999995 6654433321 111 110110
Q ss_pred EEEEeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 161 IKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 161 I~V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+=||+.....+.+...+++| |-|++--|-
T Consensus 87 -------d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP~ 129 (412)
T 4gqa_A 87 -------DWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKPL 129 (412)
T ss_dssp -------SHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESCS
T ss_pred -------CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecCC
Confidence 11110 01236899999999999999999999999 578887774
No 88
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.03 E-value=0.0012 Score=63.45 Aligned_cols=33 Identities=33% Similarity=0.547 Sum_probs=30.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcC--------CCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFR--------DDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~--------~d~eiVAIND~ 122 (334)
+||||.|+|.||+.+++.+.+. ++++||+|-|.
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~ 43 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS 43 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC
Confidence 7999999999999999999887 78999999985
No 89
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.00 E-value=0.00098 Score=62.89 Aligned_cols=95 Identities=15% Similarity=0.195 Sum_probs=67.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC-CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~-~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.||+..++.+... +++++|+|-|. +++....+.+ .|| +. ++ .
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~~-----~~---------------~~--~ 65 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RTG-----AR---------------GH--A 65 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HHC-----CE---------------EE--S
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---HcC-----Cc---------------ee--C
Confidence 48999999999999999999887 78999999995 5554433321 111 01 11 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 66 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP~ 108 (354)
T 3q2i_A 66 SLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKPM 108 (354)
T ss_dssp CHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred CHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCCC
Confidence 11111 01237899999999999999999999998 677777773
No 90
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.98 E-value=0.00067 Score=65.12 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=67.4
Q ss_pred CceeEEEEcCC-hhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 88 GNTKVGINGFG-RIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 88 M~ikVgINGfG-rIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
|++||||+|+| ++|+..++.+...+++++|||-|+ +++...-+.+ .||. . .+
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g~---~-~~------------------ 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFGK---EYGI---P-VF------------------ 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHHH---HHTC---C-EE------------------
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcCC---C-eE------------------
Confidence 56899999999 999999999988888999999995 5544322221 1110 0 01
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++-.|.
T Consensus 54 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP~ 97 (387)
T 3moi_A 54 ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKPL 97 (387)
T ss_dssp SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSCC
T ss_pred CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCCc
Confidence 111111 01226899999999999999999999998 577777773
No 91
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.98 E-value=0.0012 Score=62.28 Aligned_cols=96 Identities=21% Similarity=0.180 Sum_probs=67.4
Q ss_pred ceeEEEEcCC-hhHHHHHHHHHcC-CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 89 NTKVGINGFG-RIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 89 ~ikVgINGfG-rIGR~vlRal~~~-~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
++||||+|+| .+|+..++++.+. ++++||+|-|+ +++....+.+ .||. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~---~----------------~~~-- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN---P----------------AVF-- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS---C----------------EEE--
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC---C----------------ccc--
Confidence 5899999999 8999999999887 78999999995 6654433321 1221 0 011
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+.||+.....+.+...+++| |.|++--|-
T Consensus 72 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 115 (340)
T 1zh8_A 72 DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKPI 115 (340)
T ss_dssp SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESSS
T ss_pred CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCCC
Confidence 111111 01226899999999999999999999998 578887774
No 92
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=96.90 E-value=0.0016 Score=65.16 Aligned_cols=92 Identities=22% Similarity=0.270 Sum_probs=60.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC---------CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR---------DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGK 159 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~---------~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk 159 (334)
++||||.|+|.||+.+++.+.++ ++++|++|-|. +.+....++ + +. .
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~-------~~-------~------ 65 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--G-------GL-------P------ 65 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--T-------TC-------C------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--c-------cC-------c------
Confidence 58999999999999999887642 57999999985 444322111 0 00 0
Q ss_pred EEEEEeccCCCCCCCCccCccEEEeccCC-CCCHHHHHHHHHcCCCEEEEeCC
Q 019933 160 LIKVFSKRDPAEIPWGDYGVDYVVESSGV-FTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 160 ~I~V~~~~dP~~i~W~~~gvDiVvEsTG~-f~t~e~a~~hl~aGaKkVIISaP 211 (334)
++ .|++++ ..+.++|+|+||||. ....+.+...|++|. .|+..+|
T Consensus 66 ---~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 ---LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp ---EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred ---cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 00 111111 012378999999996 677788888999985 4555555
No 93
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.89 E-value=0.0012 Score=61.57 Aligned_cols=99 Identities=21% Similarity=0.320 Sum_probs=60.7
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||+|+|. |++|+.+++.+.+.++++||++-|. +.+. +...| .|.+.+ +.-.| +.++ .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~--~~~~---~~g~d--~~~~~g---------~~~~~--v~~~--~ 64 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER--EGSS---LLGSD--AGELAG---------AGKTG--VTVQ--S 64 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC--TTCT---TCSCC--TTCSSS---------SSCCS--CCEE--S
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec--Cchh---hhhhh--HHHHcC---------CCcCC--ceec--C
Confidence 379999996 9999999999988888999988774 1110 00000 011110 00001 2222 2
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
|.+++- . ++|+|||+|......+.+...+++|.. ||+..+
T Consensus 65 dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 65 SLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp CSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred CHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 343322 1 689999998776667778888888874 566444
No 94
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.88 E-value=0.0013 Score=61.55 Aligned_cols=99 Identities=17% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCC-ceeEEEEcCChhHHHHHHHHHc-------CCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEEC
Q 019933 86 SDG-NTKVGINGFGRIGRLVLRVAAF-------RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEIN 157 (334)
Q Consensus 86 ~~M-~ikVgINGfGrIGR~vlRal~~-------~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~in 157 (334)
+.| ++||||+|+|+||+.-++++.. .++++||||-|+ +++....+-+ .||. ....
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~---~~~y--------- 83 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA--NAGLAEARAG---EFGF---EKAT--------- 83 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH---HHTC---SEEE---------
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC--CHHHHHHHHH---HhCC---Ceec---------
Confidence 346 6999999999999977666532 357899999996 4433222221 1110 1011
Q ss_pred CEEEEEEeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 158 GKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 158 Gk~I~V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|-
T Consensus 84 ---------~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKPl 127 (393)
T 4fb5_A 84 ---------ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKPM 127 (393)
T ss_dssp ---------SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSCS
T ss_pred ---------CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccCC
Confidence 011110 012368999999999999999999999985 57776673
No 95
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.88 E-value=0.0008 Score=62.92 Aligned_cols=128 Identities=19% Similarity=0.247 Sum_probs=76.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
|||+|.|||.||+.++|. + ++|+|++=+- - .| .| |- .+ ..|.
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~~--------------k-~g------------el---gv--~a--~~d~ 54 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYDR--------------I-SK------------DI---PG--VV--RLDE 54 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEECS--------------S-CC------------CC---SS--SE--ECSS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEec--------------c-cc------------cc---Cc--ee--eCCH
Confidence 599999999999999998 4 7999887440 0 11 12 21 11 2456
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC-CCCCeEEeecCccccC-----CCCCE-E-ecCCchh
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-ADAPMFVVGVNEKTYK-----PNMNI-V-SNASCTT 241 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs-~D~p~~V~GVN~~~y~-----~~~~I-V-SnASCTT 241 (334)
+++- + ++|+|+||++...-.|...+-|++|+.-|+.|... .| +-+. +.+. +..++ + |-+..--
T Consensus 55 d~ll--a-~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~gaLad-~~l~-----~~L~~aA~~gg~~l~vpSGAi~Gl 125 (253)
T 1j5p_A 55 FQVP--S-DVSTVVECASPEAVKEYSLQILKNPVNYIIISTSAFAD-EVFR-----ERFFSELKNSPARVFFPSGAIGGL 125 (253)
T ss_dssp CCCC--T-TCCEEEECSCHHHHHHHHHHHTTSSSEEEECCGGGGGS-HHHH-----HHHHHHHHTCSCEEECCCTTCCCH
T ss_pred HHHh--h-CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcChhhhcC-HHHH-----HHHHHHHHHCCCeEEecCCcccch
Confidence 6665 2 78999999988766666788888998654444321 12 1000 1110 11122 1 3333333
Q ss_pred hhHHHHHHHHhhhcCeeEEEEEEEeecCC
Q 019933 242 NCLAPLAKVVHEEFGILEGLMTTVHATTA 270 (334)
Q Consensus 242 ncLAPvlKvL~d~fGI~~g~mTTVHA~T~ 270 (334)
.+| +... -+|+++.++|..+...
T Consensus 126 D~l----~aa~--g~l~~V~~~t~K~P~~ 148 (253)
T 1j5p_A 126 DVL----SSIK--DFVKNVRIETIKPPKS 148 (253)
T ss_dssp HHH----HHHG--GGEEEEEEEEEECGGG
T ss_pred hHH----HHhc--CCccEEEEEEeCChHH
Confidence 333 3333 5899999999877743
No 96
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.79 E-value=0.0021 Score=59.68 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=62.0
Q ss_pred ceeEEEEcCChhHHHHHHHHHc---CCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAF---RDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~---~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
++||||+|+|.||+..++.+.. .+++++++|-|. +. + ...| | +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~--~~------~--a~~~------------------g--~~~-- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSR--RE------L--GSLD------------------E--VRQ-- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECS--SC------C--CEET------------------T--EEB--
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECc--hH------H--HHHc------------------C--CCC--
Confidence 4799999999999999998876 467999999885 10 0 0000 1 010
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+.||+.....+.+...+++|. .|++--|.
T Consensus 55 -~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKPl 98 (294)
T 1lc0_A 55 -ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYPM 98 (294)
T ss_dssp -CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESCS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCCC
Confidence 122221 012379999999999999999999999984 67776664
No 97
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.60 E-value=0.0013 Score=64.65 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=68.2
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHcC-CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEE
Q 019933 89 NTKVGINGF----GRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (334)
Q Consensus 89 ~ikVgINGf----GrIGR~vlRal~~~-~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V 163 (334)
++||||+|+ |++|+..++++.+. ++++||||-|. +.+....+.+ .||. + . +++
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~-~-~---------------~~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQ---RLKL-S-N---------------ATA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HTTC-T-T---------------CEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-C-c---------------cee
Confidence 489999999 99999999999988 78999999995 5554322221 1221 0 0 011
Q ss_pred EeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC-----CEEEEeCCC
Q 019933 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA-----KKVVISAPS 212 (334)
Q Consensus 164 ~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa-----KkVIISaPs 212 (334)
+ .|.+++- .+.++|+|+.||+.....+.+...+++|. |.|++--|.
T Consensus 78 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~ 128 (438)
T 3btv_A 78 F--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWAL 128 (438)
T ss_dssp E--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSC
T ss_pred e--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcc
Confidence 1 1111110 12368999999999888899999999994 778887664
No 98
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.59 E-value=0.0019 Score=61.65 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=63.3
Q ss_pred ceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|++|. ..++++. .++++||||-|+ +++....+.+ .||. . . ++ .
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a~---~~~~---~-~---------------~~--~ 78 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFSA---VYAD---A-R---------------RI--A 78 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHHH---HSSS---C-C---------------EE--S
T ss_pred CcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHHH---HcCC---C-c---------------cc--C
Confidence 58999999999996 4566655 467999999995 6654433221 1110 0 0 00 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++| |-|++--|-
T Consensus 79 ~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 121 (361)
T 3u3x_A 79 TAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKPG 121 (361)
T ss_dssp CHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESCS
T ss_pred CHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 11111 01236899999999998899999999998 578887774
No 99
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.57 E-value=0.0027 Score=61.81 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=64.4
Q ss_pred ceeEEEEcCCh---hHHHHHHHHHcCCCceEEE-EeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 89 NTKVGINGFGR---IGRLVLRVAAFRDDVDVVA-VNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 89 ~ikVgINGfGr---IGR~vlRal~~~~d~eiVA-IND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
++||||+|+|+ ||+..++++...+++++|+ |-|+ +++....+.+ .||. +.. . ++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~-~~~-~---------------~~ 94 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGR---ELGL-DPS-R---------------VY 94 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHH---HHTC-CGG-G---------------BC
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHH---HcCC-Ccc-c---------------cc
Confidence 58999999999 9999999888877899997 8885 5554333221 1111 000 0 00
Q ss_pred eccCCCCCCCCc-----cCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 165 SKRDPAEIPWGD-----YGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 165 ~~~dP~~i~W~~-----~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++- .+ .++|+|+-||+.....+.+...+++| |-|++-.|-
T Consensus 95 --~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 143 (417)
T 3v5n_A 95 --SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKPL 143 (417)
T ss_dssp --SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESSS
T ss_pred --CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECCC
Confidence 0000000 01 25899999999999999999999998 467777773
No 100
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.56 E-value=0.0043 Score=57.52 Aligned_cols=94 Identities=22% Similarity=0.214 Sum_probs=62.7
Q ss_pred eeEEEEcCChhHHHH-HHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRLV-LRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~v-lRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+||||+|+|.||+.. ++.+.+ +++++++|-|. +++....+.+ .||.- . ++ .|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~~----~---------------~~--~~ 53 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGIG----K---------------SV--TS 53 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTCS----C---------------CB--SC
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCCC----c---------------cc--CC
Confidence 489999999999987 888877 78999999985 5554433221 11210 0 00 01
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ ..+.++|+|+.||+.....+.+...+++| |.|++-.|.
T Consensus 54 ~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP~ 95 (332)
T 2glx_A 54 VEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKPL 95 (332)
T ss_dssp HHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred HHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCCC
Confidence 1110 01126899999999988888888889988 456776563
No 101
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.54 E-value=0.0027 Score=61.17 Aligned_cols=102 Identities=19% Similarity=0.136 Sum_probs=65.3
Q ss_pred ceeEEEEcCCh---hHHHHHHHHHcCCCceEEE-EeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCeEEECCEEEEE
Q 019933 89 NTKVGINGFGR---IGRLVLRVAAFRDDVDVVA-VNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (334)
Q Consensus 89 ~ikVgINGfGr---IGR~vlRal~~~~d~eiVA-IND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~L~inGk~I~V 163 (334)
++||||+|+|+ ||+..++++...+++++|+ |-|+ +++...-+.+ |.-..-+...+ .+ .|
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~~~g~~~~~~~~~--~~---~l--------- 75 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGEQLGVDSERCYAD--YL---SM--------- 75 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHHHTTCCGGGBCSS--HH---HH---------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHHHhCCCcceeeCC--HH---HH---------
Confidence 58999999999 9999999888777899998 8784 5554333221 21100000000 00 00
Q ss_pred EeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 164 ~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
+.. +.. .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 76 l~~--~~~---~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKPl 118 (398)
T 3dty_A 76 FEQ--EAR---RADGIQAVSIATPNGTHYSITKAALEAG-LHVVCEKPL 118 (398)
T ss_dssp HHH--HTT---CTTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEECSCS
T ss_pred Hhc--ccc---cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEeCCC
Confidence 000 000 0125899999999999999999999998 467776663
No 102
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=96.52 E-value=0.0054 Score=60.58 Aligned_cols=108 Identities=20% Similarity=0.227 Sum_probs=62.2
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCC-ceEEEE-eCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCe---EE--ECCEE
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDD-VDVVAV-NDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDST---LE--INGKL 160 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d-~eiVAI-ND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~---L~--inGk~ 160 (334)
+||+|.|+ |.||+.+++.+.++++ |+++++ -+ .+.+.+.-..+ |.. ..+.+.+.++ +. +.+..
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag--~ni~~l~~~~~~f~~------~~v~v~d~~~~~~l~~~l~~~~ 76 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN--RNVKDLADAAKRTNA------KRAVIADPSLYNDLKEALAGSS 76 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES--SCHHHHHHHHHHTTC------SEEEESCGGGHHHHHHHTTTCS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcC--CCHHHHHHHHHHcCC------cEEEEcChHHHHHHHHHhccCC
Confidence 79999996 9999999999998875 999988 44 35554443332 111 1122211000 00 01111
Q ss_pred EEEEe-ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 161 IKVFS-KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 161 I~V~~-~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
+.++. ..+..++- .+. +|+|+|+++.+...+-+.+.+++| |.|+.
T Consensus 77 ~~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl 122 (388)
T 1r0k_A 77 VEAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVAL 122 (388)
T ss_dssp SEEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred cEEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEE
Confidence 22321 11111111 123 799999995577778888888988 45544
No 103
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.52 E-value=0.00098 Score=62.58 Aligned_cols=98 Identities=9% Similarity=0.031 Sum_probs=63.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCC--CHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFI--DAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~--d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
|++||||+|+|.+|+..++++ .++++||||-|+.. ..+..+-.++ .||. ... ++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~~~---------------~~- 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI---KPK---------------KY- 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC---CCE---------------EC-
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC---CCc---------------cc-
Confidence 679999999999999888887 67899999998621 1223322221 0110 000 11
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.|.+++ ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 57 -~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKPl 100 (337)
T 3ip3_A 57 -NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERK-IHAFVEKPI 100 (337)
T ss_dssp -SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEECSSS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEEeCCC
Confidence 111111 01236899999999998889999999999 467777774
No 104
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.52 E-value=0.0038 Score=62.27 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=68.0
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHcC-CCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEE
Q 019933 89 NTKVGINGF----GRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (334)
Q Consensus 89 ~ikVgINGf----GrIGR~vlRal~~~-~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V 163 (334)
++||||+|+ |.+|+..++++... ++++||||-|. +++....+.+ .||. +. +.+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~-~~----------------~~~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL-KH----------------ATG 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC-TT----------------CEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC-Cc----------------cee
Confidence 489999999 99999999999887 78999999995 5544322221 1221 00 001
Q ss_pred EeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC-----CEEEEeCCC
Q 019933 164 FSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA-----KKVVISAPS 212 (334)
Q Consensus 164 ~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa-----KkVIISaPs 212 (334)
+ .|.+++ -.+.++|+|+-||+.....+.+...+++|. |-|++--|.
T Consensus 97 ~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPl 147 (479)
T 2nvw_A 97 F--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL 147 (479)
T ss_dssp E--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCC
Confidence 1 111111 012268999999999988899999999994 778887774
No 105
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.50 E-value=0.0029 Score=63.48 Aligned_cols=106 Identities=17% Similarity=0.255 Sum_probs=62.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCC-CeEE---ECCEEEEEE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDD-STLE---INGKLIKVF 164 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~-~~L~---inGk~I~V~ 164 (334)
++||||+|+|+||+.+++.+.+.++++|++|-|. +++...-..+ ..||. ...+...++ ..+. -.+ .+.++
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~-~~~~~~~~~~~~i~~a~~~g-~~~v~ 96 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGD-EENAREATTESAMTRAIEAG-KIAVT 96 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSS-STTEEECSSHHHHHHHHHTT-CEEEE
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCC-ccccccccchhhhhhhhccC-CceEE
Confidence 5899999999999999999888889999999995 5554433321 10131 011111000 0000 001 12222
Q ss_pred eccCCCCCCCCccCccEEEeccCCC-CCHHHHHHHHHcCC
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVF-TTIAKASAHMKGGA 203 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f-~t~e~a~~hl~aGa 203 (334)
.|.+++ ..+.++|+|++|||.. ...+.+...+++|.
T Consensus 97 --~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK 133 (446)
T 3upl_A 97 --DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK 133 (446)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC
T ss_pred --CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC
Confidence 222221 1233799999999864 34677888888885
No 106
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.36 E-value=0.0034 Score=58.80 Aligned_cols=94 Identities=22% Similarity=0.308 Sum_probs=63.8
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+||||+|+ |.||+..++++.+. ++++|||-|+. .+. +. .+.. ++.. +++. +
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~--~~~-~~---~~~~---~~~~----------------~~~~--~ 55 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPA--TNV-GL---VDSF---FPEA----------------EFFT--E 55 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSS--CCC-GG---GGGT---CTTC----------------EEES--C
T ss_pred eEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCC--HHH-HH---HHhh---CCCC----------------ceeC--C
Confidence 79999999 79999999999887 59999999962 221 11 1111 1111 1111 1
Q ss_pred CCCCC-----C--CccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIP-----W--GDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~-----W--~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++- | .+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 56 ~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 105 (312)
T 3o9z_A 56 PEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKPL 105 (312)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSSS
T ss_pred HHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECCC
Confidence 11110 0 1237899999999999999999999999 567887774
No 107
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.15 E-value=0.0052 Score=57.74 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=64.2
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+||||+|+ |.||+..++++.+. +.++|||-|+. .+. +- + +.. ++.. +++. |
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~--~~~-~~-~--~~~---~~~~----------------~~~~--~ 55 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDIN--DSV-GI-I--DSI---SPQS----------------EFFT--E 55 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSS--CCC-GG-G--GGT---CTTC----------------EEES--S
T ss_pred eEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCC--HHH-HH-H--Hhh---CCCC----------------cEEC--C
Confidence 79999999 79999999999886 59999999962 221 11 1 111 1111 1111 1
Q ss_pred CCCCC--------CCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIP--------WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~--------W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++- ..+.++|+|+-||+.....+.+...+++| |.|++--|-
T Consensus 56 ~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKPl 106 (318)
T 3oa2_A 56 FEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKPL 106 (318)
T ss_dssp HHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSSC
T ss_pred HHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECCC
Confidence 11110 12347999999999999999999999999 568887774
No 108
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.12 E-value=0.0069 Score=56.53 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=60.7
Q ss_pred ceeEEEEcCChhHH-HHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGR-LVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR-~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||+|+|.+|. .+++.+.. ++++||+|-|+ +++....+-+ .|| +. . ++ .
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~-~~~~lvav~d~--~~~~~~~~a~---~~~---~~-~---------------~~--~ 56 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID-AGAELAGVFES--DSDNRAKFTS---LFP---SV-P---------------FA--A 56 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH-TTCEEEEEECS--CTTSCHHHHH---HST---TC-C---------------BC--S
T ss_pred ccEEEEECCChHHHHHhhhhhcC-CCcEEEEEeCC--CHHHHHHHHH---hcC---CC-c---------------cc--C
Confidence 47999999999996 56777653 57999999985 3332211111 011 00 0 00 0
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
|.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|.
T Consensus 57 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP~ 99 (336)
T 2p2s_A 57 SAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKPP 99 (336)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSSC
T ss_pred CHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCCC
Confidence 11111 012368999999999999999999999984 57776664
No 109
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.75 E-value=0.0073 Score=57.40 Aligned_cols=96 Identities=16% Similarity=0.154 Sum_probs=61.0
Q ss_pred ceeEEEEc-CChhHHH-HH----HHHHcCCCceEE---------EEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCe
Q 019933 89 NTKVGING-FGRIGRL-VL----RVAAFRDDVDVV---------AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDST 153 (334)
Q Consensus 89 ~ikVgING-fGrIGR~-vl----Ral~~~~d~eiV---------AIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~ 153 (334)
++||||+| +|++|+. .+ +++.+.+.++++ +|-|. +++....+.+ .||. .
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~---~~~~---~-------- 69 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAK---RFNI---A-------- 69 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHH---HTTC---C--------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHH---HhCC---C--------
Confidence 68999999 9999997 66 777766655543 67774 4443333221 1110 0
Q ss_pred EEECCEEEEEEeccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 154 LEINGKLIKVFSKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 154 L~inGk~I~V~~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.++ .|.+++ -.+.++|+|+.||+.....+.+...+++| |.|++--|-
T Consensus 70 --------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP~ 116 (383)
T 3oqb_A 70 --------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKPI 116 (383)
T ss_dssp --------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSCS
T ss_pred --------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCCC
Confidence 010 111111 01126899999999999999999999999 567776663
No 110
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.28 E-value=0.22 Score=44.18 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=28.2
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.|++||.|-|.|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGT-CEEEEEES
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCC-CEEEEEEc
Confidence 35579999999999999999999875 78888764
No 111
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.23 E-value=0.039 Score=49.96 Aligned_cols=94 Identities=17% Similarity=0.212 Sum_probs=59.6
Q ss_pred eeEEEEcCChhHHHHHHH-HHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRLVLRV-AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRa-l~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||+|.|.|.+|+.+++. .+....+++|++-|. |++. .| -.++|.+ |....|
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k----------~g-------------~~i~gv~--V~~~~d 138 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESK----------IG-------------TEVGGVP--VYNLDD 138 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTT----------TT-------------CEETTEE--EEEGGG
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHH----------HH-------------hHhcCCe--eechhh
Confidence 589999999999999994 334456999999884 3321 11 1234433 323233
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA 213 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~ 213 (334)
..++- .+ . |+|+-|++.....+-+..-+++|.+.++.-+|-.
T Consensus 139 l~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~~ 180 (215)
T 2vt3_A 139 LEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPAR 180 (215)
T ss_dssp HHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred HHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCcee
Confidence 32221 12 2 9999999987777777888889998887778853
No 112
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.00 E-value=0.022 Score=51.39 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=62.7
Q ss_pred eeEEEEcCChhHHHHHHHH-HcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRLVLRVA-AFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal-~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||+|.|.|.+|+.+++.+ .+. ++++||+-|. |++. .| -.++|.+ +....|
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k----------~g-------------~~i~gv~--V~~~~d 132 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEK----------VG-------------RPVRGGV--IEHVDL 132 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTT----------TT-------------CEETTEE--EEEGGG
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHH----------Hh-------------hhhcCCe--eecHHh
Confidence 6999999999999999863 334 7999999873 3311 11 1234433 323233
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
..++ -.+ ++|.|+-|++.....+-+..-+++|++-++.-.|.
T Consensus 133 l~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 133 LPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp HHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 3222 134 79999999998876677777788998876666774
No 113
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.68 E-value=0.064 Score=50.95 Aligned_cols=89 Identities=20% Similarity=0.160 Sum_probs=55.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+|||.|.|.|.||+.+++.|.++.++.++.++. +.+..+-+. . ..+.+ ...|
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~-----~~~~~~~~~-------~---------------~~~~~-d~~d 67 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN-----ENLEKVKEF-------A---------------TPLKV-DASN 67 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH-----HHHHHHTTT-------S---------------EEEEC-CTTC
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH-----HHHHHHhcc-------C---------------CcEEE-ecCC
Confidence 459999999999999999997765555444433 333222110 0 01111 1122
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCE
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKK 205 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKk 205 (334)
++.+.=--.++|+||.|+|.|...+-+++-+++|+.-
T Consensus 68 ~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~y 104 (365)
T 3abi_A 68 FDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVDM 104 (365)
T ss_dssp HHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcce
Confidence 2211100127899999999998888889999999844
No 114
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.55 E-value=0.03 Score=54.22 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=30.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC---CceEEEEeCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD---DVDVVAVNDP 122 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~---d~eiVAIND~ 122 (334)
++||||.|+|.||+.+++.+.+.+ ++++++|-|.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 479999999999999999998865 6899999884
No 115
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.25 E-value=0.12 Score=50.92 Aligned_cols=107 Identities=14% Similarity=0.196 Sum_probs=64.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCeE--EECCEEEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTL--EINGKLIKVFS 165 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~L--~inGk~I~V~~ 165 (334)
.||+|.| +|.||+..++.+.+.++|+++|+.- ..+.+.++-..+ |.. .-+.+.++... .+. .. +..
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a-~~n~~~l~~q~~~f~p------~~v~v~~~~~~~~~l~-~~--~~G 73 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISF-HSNLELAFKIVKEFNV------KNVAITGDVEFEDSSI-NV--WKG 73 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEE-SSCHHHHHHHHHHHTC------CEEEECSSCCCCCSSS-EE--EES
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEc-cCCHHHHHHHHHHcCC------CEEEEccHHHHHHHHH-HH--ccC
Confidence 6899999 8999999999998877799999943 245665555432 222 11211111111 000 00 111
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
+....++- ....+|+|+.++-.+...+-.-+.+++| |+|.+
T Consensus 74 ~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaL 114 (376)
T 3a06_A 74 SHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCL 114 (376)
T ss_dssp TTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEE
T ss_pred HHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEE
Confidence 10000110 1125899999999999998888889988 56666
No 116
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.03 E-value=0.041 Score=50.01 Aligned_cols=97 Identities=22% Similarity=0.252 Sum_probs=63.6
Q ss_pred eeEEEEcCChhHHHHHHHHH-cCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRLVLRVAA-FRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~-~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||+|.|.|..|+.+++.+. +..++++||+=|. |++. ..|+ =.++| +.|+.-.+
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~---------kiG~------------~~i~G--vpV~~~~d 139 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSND---------LVGK------------TTEDG--IPVYGIST 139 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTST---------TTTC------------BCTTC--CBEEEGGG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchh---------ccCc------------eeECC--eEEeCHHH
Confidence 59999999999999998742 3357999998773 3310 1221 01223 23333222
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS 212 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs 212 (334)
.+++ -.+.++|.++-|++.....+.+..-+++|.|-++--+|.
T Consensus 140 L~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 140 INDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp HHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 1111 134589999999998877778888888999987777774
No 117
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.91 E-value=0.087 Score=47.82 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=27.6
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|+.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 43 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTR 43 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEEC
Confidence 445899999 9999999999999875 77777654
No 118
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=93.69 E-value=0.31 Score=47.18 Aligned_cols=137 Identities=13% Similarity=0.157 Sum_probs=82.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC-CceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~-d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
++||||.|+| +|+.-++++.+.+ +++||||-|. +.+...-+-+ .||- .++ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~a~---~~gv--------------------~~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSRELAH---AFGI--------------------PLY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHHHH---HTTC--------------------CEE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHHHH---HhCC--------------------CEE--C
Confidence 5899999999 7999889887765 5999999985 4432222111 1110 111 1
Q ss_pred CCCCCCCCccCccEEEeccCCCCC----HHHHHHHHHcCCCEEEEeCCCC-------------CCCeEEeecCccccCC-
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTT----IAKASAHMKGGAKKVVISAPSA-------------DAPMFVVGVNEKTYKP- 229 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t----~e~a~~hl~aGaKkVIISaPs~-------------D~p~~V~GVN~~~y~~- 229 (334)
|.+++. .++|+|+=||...+. .|.+.+.|++|. -|++--|-. ..-.+..|-|+..+..
T Consensus 59 ~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~v 134 (372)
T 4gmf_A 59 SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHPLHPDDISSLQTLAQEQGCCYWINTFYPHTRAG 134 (372)
T ss_dssp SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESCCCHHHHHHHHHHHHHHTCCEEEECSGGGSHHH
T ss_pred CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecCCCHHHHHHHHHHHHHcCCEEEEcCcccCCHHH
Confidence 233332 157888889887776 678888899985 577777731 1223444555432210
Q ss_pred ---------------CCCEEecCCchhhhHHHHHHHHhhhcCe
Q 019933 230 ---------------NMNIVSNASCTTNCLAPLAKVVHEEFGI 257 (334)
Q Consensus 230 ---------------~~~IVSnASCTTncLAPvlKvL~d~fGI 257 (334)
.....-.+.|...-+-|.+.+|....|.
T Consensus 135 r~~i~~~~~l~~~~~~~~~~i~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 135 RTWLRDAQQLRRCLAKTPPVVHATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhccCCceEEEEEeccccccchHHHHHHhcCC
Confidence 1112234578888888888887766553
No 119
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.61 E-value=0.061 Score=49.69 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=27.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R 42 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAH-RPTYILAR 42 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CCEEEEEC
Confidence 5899999 8999999999999886 78777755
No 120
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.52 E-value=0.15 Score=46.16 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=27.8
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 556999999 9999999999999885 78877754
No 121
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.44 E-value=0.14 Score=41.68 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=32.7
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.|+-+|.|.|+|++|+.+++.|.+.+ .++++|.. +++.+..+
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g-~~v~vid~---~~~~~~~~ 46 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASD-IPLVVIET---SRTRVDEL 46 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT-CCEEEEES---CHHHHHHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHHH
Confidence 45568999999999999999998875 78888864 55554443
No 122
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.41 E-value=0.29 Score=41.95 Aligned_cols=30 Identities=30% Similarity=0.433 Sum_probs=26.5
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGAR 32 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 899999 9999999999999875 88887764
No 123
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=93.08 E-value=0.12 Score=48.28 Aligned_cols=89 Identities=26% Similarity=0.223 Sum_probs=58.6
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 89 NTKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 89 ~ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
.+||+|.|+ |++|+.+++.+.+. ++++|+.-+|.. .| . . +.| +.++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~--------------~g----~-------~--~~G--~~vy~-- 54 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGK--------------GG----T-------T--HLG--LPVFN-- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC--------------TT----C-------E--ETT--EEEES--
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCc--------------cc----c-------e--eCC--eeccC--
Confidence 369999996 99999999998876 488776555410 00 0 0 122 22322
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEE-EeC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVV-ISA 210 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVI-ISa 210 (334)
+.++++ .+..+|+|+.+++.....+.+...+++|.+.+| ++.
T Consensus 55 sl~el~-~~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 55 TVREAV-AATGATASVIYVPAPFCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp SHHHHH-HHHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred CHHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 122221 012689999999999888888888999998744 444
No 124
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.85 E-value=0.045 Score=48.93 Aligned_cols=31 Identities=13% Similarity=0.093 Sum_probs=26.6
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||.|-| +|.||+.+++.|.+++..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R 33 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVR 33 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEES
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC
Confidence 799999 9999999999988774578887754
No 125
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.51 E-value=0.22 Score=44.66 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG-HPTYVLFR 36 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 9999999999999875 78877754
No 126
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.45 E-value=0.4 Score=48.48 Aligned_cols=101 Identities=13% Similarity=0.231 Sum_probs=66.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------CCHHHHhhhhcccccc-ccCCCeEEEeCCCeEEECCEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYDSTH-GVFKGTINVVDDSTLEINGKL 160 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~--------~d~~~~ayLlkYDSth-Gkf~~~v~~e~~~~L~inGk~ 160 (334)
.+|+|-|||.+|..+++.|.+.+ -.||+|.|.. .|.+.+..|+++-..+ |+... +.+ .+. +.+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~---~~~--~~~-~a~- 324 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHLN-VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKE---YLN--HSS-TAK- 324 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHTT-CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGG---GGG--TCS-SCE-
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHH---HHh--hcC-CcE-
Confidence 58999999999999999998875 8999998841 4666677776643222 22211 000 000 111
Q ss_pred EEEEeccCCCCCCCCccCccEEEecc-CCCCCHHHHHHHHHcCCCE
Q 019933 161 IKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKK 205 (334)
Q Consensus 161 I~V~~~~dP~~i~W~~~gvDiVvEsT-G~f~t~e~a~~hl~aGaKk 205 (334)
.. +++++ | +..+|+.+-|. +.-.+.+.+...++.+||-
T Consensus 325 --~v---~~~~~-~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~ 363 (470)
T 2bma_A 325 --YF---PNEKP-W-GVPCTLAFPCATQNDVDLDQAKLLQKNGCIL 363 (470)
T ss_dssp --EC---SSCCT-T-SSCCSEEEECSSTTCBCSHHHHHHHHTTCCE
T ss_pred --Ee---cCcCe-e-ecCccEEEeccccCcCCHHHHHHHHhcCcEE
Confidence 11 12333 7 57999999985 6677889999888888864
No 127
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.38 E-value=0.61 Score=38.80 Aligned_cols=85 Identities=26% Similarity=0.386 Sum_probs=57.4
Q ss_pred ceeEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE
Q 019933 89 NTKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF 164 (334)
Q Consensus 89 ~ikVgINGf----GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~ 164 (334)
+.+|+|+|. |++|+.+++.+.+.+ ++|..+|-- ++ + +.|. +++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~------------~~----------------~--i~G~--~~~ 60 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN------------YD----------------E--IEGL--KCY 60 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CS----------------E--ETTE--ECB
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC------------CC----------------e--ECCe--eec
Confidence 458999998 999999999998875 787777641 00 1 1232 222
Q ss_pred eccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 165 SKRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 165 ~~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
.++++++= .+|+|+=+++.....+-.+.-++.|++.+++...
T Consensus 61 --~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 61 --RSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp --SSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred --CCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 34455542 6899999998644445555556789988877543
No 128
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.95 E-value=0.19 Score=45.47 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 36 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYAR 36 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEEC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEEC
Confidence 5899999 9999999999999875 77777654
No 129
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=91.82 E-value=0.23 Score=45.82 Aligned_cols=68 Identities=25% Similarity=0.212 Sum_probs=48.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+|-+|+| .||+||.+.+++ +.++++||+.-|.. + .
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~~---------------------------~-~--------------- 48 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDVN---------------------------G-V--------------- 48 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEETT---------------------------E-E---------------
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcCC---------------------------C-c---------------
Confidence 5889999 799999998876 44569998875520 0 0
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEE
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkV 206 (334)
+++ . ++|+|||-|-.-...+.++..++.|.+-|
T Consensus 49 -~~l--~--~~DVvIDFT~P~a~~~~~~~~~~~g~~~V 81 (228)
T 1vm6_A 49 -EEL--D--SPDVVIDFSSPEALPKTVDLCKKYRAGLV 81 (228)
T ss_dssp -EEC--S--CCSEEEECSCGGGHHHHHHHHHHHTCEEE
T ss_pred -ccc--c--CCCEEEECCCHHHHHHHHHHHHHcCCCEE
Confidence 011 1 46899988877777788888888887543
No 130
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=91.65 E-value=0.66 Score=38.78 Aligned_cols=85 Identities=19% Similarity=0.187 Sum_probs=57.9
Q ss_pred eeEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 90 ikVgINGf----GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
.+|+|+|. |++|+.+++.+.+.+ ++|..+|-- . . + .. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~----------------~--~-------g-~~--i~G~--~~~- 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPK----------------V--A-------G-KT--LLGQ--QGY- 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSS----------------S--T-------T-SE--ETTE--ECC-
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCc----------------c--c-------c-cc--cCCe--ecc-
Confidence 47999998 899999999988765 787777641 0 0 0 01 1332 222
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISa 210 (334)
.++++++ ..+|+|+=|++.....+-...-++.|+|.+++..
T Consensus 62 -~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 -ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp -SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred -CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 3456665 2789999999975555666666678999888853
No 131
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.49 E-value=0.16 Score=46.06 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=28.5
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
.|++||+|.|+|.+|+.+.+.+...+ ++|..+ |. +.+....
T Consensus 3 ~M~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~~--~~~~~~~ 43 (299)
T 1vpd_A 3 AMTMKVGFIGLGIMGKPMSKNLLKAG-YSLVVS-DR--NPEAIAD 43 (299)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTT-CEEEEE-CS--CHHHHHH
T ss_pred cccceEEEECchHHHHHHHHHHHhCC-CEEEEE-eC--CHHHHHH
Confidence 35579999999999999999998774 776544 42 4444433
No 132
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.46 E-value=0.94 Score=39.13 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=27.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG-HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC-CeEEEEEC
Confidence 35899999 8999999999999885 78877754
No 133
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=91.18 E-value=0.22 Score=45.30 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=31.1
Q ss_pred CCceeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 87 DGNTKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 87 ~M~ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
+|++||+|.|. |.+|+.+.+.+.+.+ ++|+.++- +.+....+
T Consensus 9 ~mmm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r---~~~~~~~~ 51 (286)
T 3c24_A 9 VGPKTVAILGAGGKMGARITRKIHDSA-HHLAAIEI---APEGRDRL 51 (286)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHSS-SEEEEECC---SHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC---CHHHHHHH
Confidence 35569999999 999999999998875 78775542 45444443
No 134
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=91.18 E-value=0.56 Score=46.96 Aligned_cols=32 Identities=38% Similarity=0.570 Sum_probs=29.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.||+|-|||.+|+.+++.|.+.+ ..||+|.|.
T Consensus 236 ~~vaVqGfGnVG~~~a~~L~e~G-akvVavsD~ 267 (440)
T 3aog_A 236 ARVAIQGFGNVGNAAARAFHDHG-ARVVAVQDH 267 (440)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEECS
T ss_pred CEEEEeccCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 58999999999999999998875 999999985
No 135
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.02 E-value=0.55 Score=38.75 Aligned_cols=82 Identities=17% Similarity=0.122 Sum_probs=59.0
Q ss_pred eEEEEc----CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 91 KVGING----FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 91 kVgING----fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+|+|+| -+++|..+++.|.+.+ ++|..||-- ++. +.|.+ + -
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~------------------i~G~~--~--y 50 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGE------------------VLGKT--I--I 50 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSE------------------ETTEE--C--B
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCc------------------CCCee--c--c
Confidence 799999 3889999999998875 799999841 122 22321 1 1
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
.+..++| . +|+|+-+++.....+..+.-.+.|+|.|+++..
T Consensus 51 ~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 51 NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 3456666 2 899999988766666667777889998888654
No 136
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=90.60 E-value=1 Score=37.53 Aligned_cols=83 Identities=25% Similarity=0.300 Sum_probs=57.3
Q ss_pred eeEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 90 ikVgINGf----GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
.+|+|+|. |++|+.+++.+.+.+ ++|..||-- ++ .+.|. .++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~------------~~------------------~i~G~--~~y- 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPK------------YE------------------EVLGR--KCY- 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT------------CS------------------EETTE--ECB-
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCC------------CC------------------eECCe--ecc-
Confidence 48999997 799999999988765 788777641 01 11232 222
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISa 210 (334)
.+.++++- .+|+|+=++......+-++.-++.|+|.++++.
T Consensus 69 -~sl~~l~~---~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 -PSVLDIPD---KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp -SSGGGCSS---CCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred -CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 23445542 689999999876666666667789999887763
No 137
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.58 E-value=0.2 Score=47.50 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G-~~V~~~dr 170 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWG-FPLRCWSR 170 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEcC
Confidence 48999999999999999998764 88877764
No 138
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.53 E-value=0.22 Score=47.99 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFG-LAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 88877654
No 139
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=90.45 E-value=0.11 Score=50.61 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=56.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCeEEECCEEEEEEecc
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKVFSKR 167 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~ 167 (334)
+||+|.|.|.||+.+++.|.+++++ ..|.+-+. +.+...-+.+ +.. +....+.. +.+ ...
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~~l~~---~~~~~~~~------------~~~-D~~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQSIKA---KGYGEIDI------------TTV-DAD 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHHHHHH---TTCCCCEE------------EEC-CTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHHHhhh---hcCCceEE------------EEe-cCC
Confidence 5999999999999999999988765 34445442 4443322221 110 00000000 000 011
Q ss_pred CCCCCC--CCccCccEEEeccCCCCCHHHHHHHHHcCCCEE
Q 019933 168 DPAEIP--WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKV 206 (334)
Q Consensus 168 dP~~i~--W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkV 206 (334)
|++++. ..+.++|+||.|+|.+...+-+..-+++|++.+
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEE
Confidence 111110 011248999999999987777888889998643
No 140
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.44 E-value=0.4 Score=42.85 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 4899999 9999999999999886 77777643
No 141
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=90.38 E-value=0.23 Score=47.34 Aligned_cols=31 Identities=29% Similarity=0.405 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G-~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALG-MHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhCC-CEEEEECC
Confidence 48999999999999999998774 88888764
No 142
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=90.35 E-value=0.23 Score=47.52 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G-~~V~~~d~ 172 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHHCc-CEEEEECC
Confidence 48999999999999999998775 88877753
No 143
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.28 E-value=0.25 Score=39.70 Aligned_cols=39 Identities=15% Similarity=0.137 Sum_probs=30.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.+|.|.|+|++|+.+++.|.+++ .+++++.. +++....+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g-~~V~~id~---~~~~~~~~ 45 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG-KKVLAVDK---SKEKIELL 45 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEES---CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEEC---CHHHHHHH
Confidence 48999999999999999998875 78887753 55544333
No 144
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=90.25 E-value=0.25 Score=48.89 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=29.2
Q ss_pred eeEEEEcCChhHHHHHHHHHc-CCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAF-RDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~-~~d~eiVAIND~ 122 (334)
.+|+|.|||+||+.+++.+.+ . .++|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 589999999999999999988 6 4999999986
No 145
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=90.17 E-value=0.25 Score=46.50 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d 154 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALG-AQVRGFS 154 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998765 7876665
No 146
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.17 E-value=0.24 Score=47.05 Aligned_cols=31 Identities=29% Similarity=0.491 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMG-ATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 88776653
No 147
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.17 E-value=0.24 Score=44.11 Aligned_cols=42 Identities=12% Similarity=0.344 Sum_probs=30.4
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCc----eEEEEeCCCCCHHHHhhhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDV----DVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~----eiVAIND~~~d~~~~ayLl 133 (334)
|++||+|.|.|.+|+.+.+.+.+.+ + +|... | .+++....+.
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g-~~~~~~V~~~-~--r~~~~~~~~~ 46 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKN-IVSSNQIICS-D--LNTANLKNAS 46 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT-SSCGGGEEEE-C--SCHHHHHHHH
T ss_pred CCCeEEEECccHHHHHHHHHHHhCC-CCCCCeEEEE-e--CCHHHHHHHH
Confidence 4569999999999999999998875 4 55544 4 2555554443
No 148
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.16 E-value=0.3 Score=45.86 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=31.6
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCc--eEEEEeCCCCCHHHHhhhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDV--DVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~--eiVAIND~~~d~~~~ayLl 133 (334)
.|.+||+|+|+|.||+.+.+.+...+ + +|++.+- +.+.+..+.
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~dr---~~~~~~~a~ 75 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDI---NPESISKAV 75 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEECS---CHHHHHHHH
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEEC---CHHHHHHHH
Confidence 44579999999999999999998875 5 6666542 555554443
No 149
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=90.11 E-value=0.25 Score=47.26 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFG-MKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhCC-CEEEEEcC
Confidence 48999999999999999998774 88887764
No 150
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.97 E-value=0.35 Score=38.02 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|.|+|++|+.+++.|.+.+ .+++.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 38999999999999999998875 78777753
No 151
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=89.90 E-value=0.26 Score=47.10 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||.|||+||+.+.+.+...+ +++++.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg-~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFG-MKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhcccC-ceeeecC
Confidence 48999999999999999998775 8877664
No 152
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=89.87 E-value=0.26 Score=46.88 Aligned_cols=30 Identities=27% Similarity=0.484 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d 175 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFG-AKVIAYD 175 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEC
Confidence 58999999999999999998765 8877665
No 153
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=89.76 E-value=0.27 Score=47.37 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G-~~V~~~d~ 179 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMG-AKVIAYDV 179 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CeEEEEecCHHHHHHHHHHhhCC-CEEEEECC
Confidence 48999999999999999998774 88877754
No 154
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=89.73 E-value=0.62 Score=46.92 Aligned_cols=101 Identities=13% Similarity=0.234 Sum_probs=63.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------CCHHHHhhhhccccccc-cCCCeEEEeCCCeEEECCEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------IDAKYMAYMFKYDSTHG-VFKGTINVVDDSTLEINGKL 160 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~--------~d~~~~ayLlkYDSthG-kf~~~v~~e~~~~L~inGk~ 160 (334)
.+|+|-|||.+|..+++.|.+.+ ..+|+|.|.. .|++.+..+.++...++ +...-+ . . ..+.+.
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~--~-~---~~~a~~ 312 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEKG-AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYL--K-Y---SKTAKY 312 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGG--G-T---CSSCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhh--h-c---CCCceE
Confidence 58999999999999999988764 7888888742 45666665554333221 110000 0 0 001111
Q ss_pred EEEEeccCCCCCCCCccCccEEEec-cCCCCCHHHHHHHHHcCCCE
Q 019933 161 IKVFSKRDPAEIPWGDYGVDYVVES-SGVFTTIAKASAHMKGGAKK 205 (334)
Q Consensus 161 I~V~~~~dP~~i~W~~~gvDiVvEs-TG~f~t~e~a~~hl~aGaKk 205 (334)
+ ++++ .| +..+|+.+=| ++.-.+.+.+..-++.+||-
T Consensus 313 v------~~~~-i~-~~~~DI~iPcA~~~~I~~~na~~l~~~~ak~ 350 (456)
T 3r3j_A 313 F------ENQK-PW-NIPCDIAFPCATQNEINENDADLFIQNKCKM 350 (456)
T ss_dssp E------CSCC-GG-GSCCSEEEECSCTTCBCHHHHHHHHHHTCCE
T ss_pred e------CCcc-cc-ccCccEEEeCCCccchhhHHHHHHHhcCCeE
Confidence 1 1222 25 3589999998 67788888888777778853
No 155
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=89.68 E-value=0.28 Score=46.88 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+-
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFG-MKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 88877764
No 156
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=89.68 E-value=0.28 Score=47.34 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFG-MNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEECC
Confidence 48999999999999999998775 88887753
No 157
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=89.59 E-value=0.3 Score=46.16 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFD-MDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998765 88877764
No 158
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=89.47 E-value=0.46 Score=47.70 Aligned_cols=102 Identities=16% Similarity=0.262 Sum_probs=65.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC--------C-CHHHHhhhhcccccc-ccCCCeEEEeCCCeEEECCE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF--------I-DAKYMAYMFKYDSTH-GVFKGTINVVDDSTLEINGK 159 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~--------~-d~~~~ayLlkYDSth-Gkf~~~v~~e~~~~L~inGk 159 (334)
.+|+|-|||.+|..+++.|.+.. ..||+|.|.. . |++.+..|++|-..+ |.+.. .. +++ +.+
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G-akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~---y~--~~~--~a~ 302 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG-AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQD---YA--DKF--GVQ 302 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT-CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHH---HH--HHH--TCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhh---cc--ccc--CCE
Confidence 58999999999999999998874 8999987731 2 455556666543222 22210 00 011 122
Q ss_pred EEEEEeccCCCCCCCCccCccEEEecc-CCCCCHHHHHHHHHcCCCEEEE
Q 019933 160 LIKVFSKRDPAEIPWGDYGVDYVVESS-GVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 160 ~I~V~~~~dP~~i~W~~~gvDiVvEsT-G~f~t~e~a~~hl~aGaKkVII 208 (334)
.+ . ++++ | +..+|+.+-|. +...+.+.+......|||- |.
T Consensus 303 ~i---~---~~e~-~-~~~~Dil~P~A~~~~I~~~na~~l~a~g~ki-V~ 343 (449)
T 1bgv_A 303 FF---P---GEKP-W-GQKVDIIMPCATQNDVDLEQAKKIVANNVKY-YI 343 (449)
T ss_dssp EE---E---TCCG-G-GSCCSEEECCSCTTCBCHHHHHHHHHTTCCE-EE
T ss_pred Ee---C---chhh-h-cCCcceeeccccccccchhhHHHHHhcCCeE-EE
Confidence 21 1 2233 7 57899999985 7778889998876678863 44
No 159
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.45 E-value=0.3 Score=42.96 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=30.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
++||+|.|.|.+|+.+++.+.+.+ ++++.+.|. +++....
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r--~~~~~~~ 62 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ-IPAIIANSR--GPASLSS 62 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT-CCEEEECTT--CGGGGHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECC--CHHHHHH
Confidence 369999999999999999998874 787775663 4444433
No 160
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=89.42 E-value=0.11 Score=50.52 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=27.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|+|.|||+||+.+.+.+.+.+ .+|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G-akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG-AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEE-EEeC
Confidence 48999999999999999998885 8888 8885
No 161
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.37 E-value=0.28 Score=47.36 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G-~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFG-CNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHCC-CEEEEeCC
Confidence 48999999999999999998764 88777653
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.35 E-value=0.34 Score=39.75 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|.|.|+|++|+.+++.|.+.+ .+++.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g-~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG-QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CCEEEEEC
Confidence 48999999999999999998874 78887754
No 163
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=89.33 E-value=0.32 Score=46.80 Aligned_cols=30 Identities=30% Similarity=0.450 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFG-FNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998765 8877765
No 164
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.30 E-value=0.32 Score=42.76 Aligned_cols=31 Identities=29% Similarity=0.274 Sum_probs=25.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+||+|.|+|.+|+.+++.+...+ .+|+.++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~ 58 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVGS 58 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 359999999999999999998765 6776665
No 165
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=89.18 E-value=0.25 Score=47.06 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G-~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWG-ATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSC-CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999987664 88777653
No 166
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=89.12 E-value=0.29 Score=47.56 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+-
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG-~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFR-ARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSC-CEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhCC-CEEEEECC
Confidence 48999999999999999987664 88877653
No 167
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=89.06 E-value=0.34 Score=46.60 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.|
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G-~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFG-MSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 48999999999999999998764 7876554
No 168
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.03 E-value=0.34 Score=45.68 Aligned_cols=31 Identities=32% Similarity=0.433 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 175 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFG-MRVVYHAR 175 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998765 78766653
No 169
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=88.95 E-value=0.27 Score=46.19 Aligned_cols=31 Identities=35% Similarity=0.538 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG-MRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhC-cEEEEEec
Confidence 48999999999999999998764 88877753
No 170
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.94 E-value=0.42 Score=44.23 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=30.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||+|+|+|.+|+.+.+.|.+.+ ++|+..|- +++....+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~dr---~~~~~~~l~ 61 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG-FKVTVWNR---TLSKCDELV 61 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---SGGGGHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHH
Confidence 59999999999999999998875 77776643 444443433
No 171
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=88.90 E-value=0.69 Score=45.94 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=29.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPF 123 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~ 123 (334)
.||+|-|||.+|+.+++.|.+.. ..||+|.|..
T Consensus 213 ~~vaVqG~GnVG~~~a~~L~~~G-akvVavsD~~ 245 (421)
T 2yfq_A 213 AKIAVQGFGNVGTFTVKNIERQG-GKVCAIAEWD 245 (421)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEECCBCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEecC
Confidence 58999999999999999998875 9999999963
No 172
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=88.79 E-value=0.36 Score=45.37 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALG-MNILLYDP 173 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ceEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998775 88777654
No 173
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=88.67 E-value=0.36 Score=45.84 Aligned_cols=31 Identities=23% Similarity=0.412 Sum_probs=26.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G-~~V~~~d~ 177 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFG-AKVITYDI 177 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 58999999999999999998765 88877764
No 174
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=88.43 E-value=0.39 Score=45.20 Aligned_cols=31 Identities=39% Similarity=0.536 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G-~~V~~~d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMG-MKVLAYDI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998775 88877654
No 175
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.36 E-value=0.55 Score=38.63 Aligned_cols=31 Identities=32% Similarity=0.486 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|.|.|+|+||+.+++.|.+.+ .+|+.+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 48999999999999999998875 68777753
No 176
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.35 E-value=0.33 Score=44.64 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=26.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|++||+|.|+|.+|+.+.+.+.+.+ ++|+..|
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~d 45 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEWP-GGVTVYD 45 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTST-TCEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCC-CeEEEEe
Confidence 3569999999999999999998775 7776664
No 177
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.34 E-value=0.43 Score=40.13 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=29.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcC-CCceEEEEeCCCCCHHHHhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFR-DDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~-~d~eiVAIND~~~d~~~~ay 131 (334)
.+|.|.|+|++|+.+++.|.+. + .+++++.. +++....
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~---~~~~~~~ 78 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEI---REEAAQQ 78 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES---CHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC---CHHHHHH
Confidence 4899999999999999999876 5 78887754 4554433
No 178
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.30 E-value=0.43 Score=42.94 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=29.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
++||+|.|.|.+|..+.+.|.+.+ .+|..++. +.+....+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r---~~~~~~~~ 42 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQ---WPAHIEAI 42 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC-CcEEEEEC---CHHHHHHH
Confidence 369999999999999999988765 67766643 44444443
No 179
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.23 E-value=0.42 Score=45.65 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHH-cCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAA-FRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~-~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+. ..+ ++|++.+-
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G-~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG-MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC-CEEEEECC
Confidence 48999999999999999998 664 78776653
No 180
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=88.16 E-value=0.81 Score=45.62 Aligned_cols=33 Identities=24% Similarity=0.526 Sum_probs=29.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
-.||+|-|||.+|+.+++.|.+.+ ..||+|.|.
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G-akVVavsD~ 253 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG-AKVIGISDA 253 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT-CEEEEEECS
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 368999999999999999998864 899999986
No 181
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.02 E-value=0.45 Score=43.70 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=31.6
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
|++||+|.|+|.+|+.+.+.|.+.+ ++|+..| .+++.+..+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~d---r~~~~~~~~~ 47 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG-LSTWGAD---LNPQACANLL 47 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC---SCHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CeEEEEE---CCHHHHHHHH
Confidence 3469999999999999999998875 7877664 2565555544
No 182
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.01 E-value=0.78 Score=42.71 Aligned_cols=129 Identities=16% Similarity=0.258 Sum_probs=71.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
-+|.|+|.|.||...++++...+ .+++++.. +.+...++.+ +|. + .+ + .++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa---------~-~v-~----------~~~ 228 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFAR---NEHKKQDALS----MGV---------K-HF-Y----------TDP 228 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECS---SSTTHHHHHH----TTC---------S-EE-E----------SSG
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHh----cCC---------C-ee-c----------CCH
Confidence 37999999999999999998775 68877642 2233333332 220 1 11 1 122
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCC-CCCCeEEeecCcccc-CCCCCEEecCCchhhhHHHH
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPS-ADAPMFVVGVNEKTY-KPNMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs-~D~p~~V~GVN~~~y-~~~~~IVSnASCTTncLAPv 247 (334)
+.+ .+ ++|+||||+|.-...+.+-..++.|-+-|++..+. .+.+.+- .. +.+ ..+..++..-..+...+.-+
T Consensus 229 ~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~--~~-~~~~~~~~~i~g~~~~~~~~~~~~ 302 (348)
T 3two_A 229 KQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLS--VF-DFIHLGNRKVYGSLIGGIKETQEM 302 (348)
T ss_dssp GGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEE--HH-HHHHTCSCEEEECCSCCHHHHHHH
T ss_pred HHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCC--HH-HHHhhCCeEEEEEecCCHHHHHHH
Confidence 222 22 89999999998867777766666555334443333 2222111 11 111 22345555444444556666
Q ss_pred HHHHhh
Q 019933 248 AKVVHE 253 (334)
Q Consensus 248 lKvL~d 253 (334)
++.+.+
T Consensus 303 ~~l~~~ 308 (348)
T 3two_A 303 VDFSIK 308 (348)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666654
No 183
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=87.95 E-value=0.15 Score=46.44 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=25.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
|++||+|+|.|++|+.+.+.+... ++|+.+-|. +.+....+
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~--~~~~~~~~ 41 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR--YEIGYILSR--SIDRARNL 41 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC------CCCEECS--SHHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC--CHHHHHHH
Confidence 446999999999999999887654 676555553 44444333
No 184
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.92 E-value=0.52 Score=44.05 Aligned_cols=33 Identities=18% Similarity=0.223 Sum_probs=26.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|++||+|+|+|.+|..+.+.+.+.+.++|+..|
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 557999999999999999999876426766554
No 185
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=87.79 E-value=0.43 Score=46.79 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALG-IRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998775 8877664
No 186
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=87.75 E-value=0.44 Score=46.60 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G-~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLG-WKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998765 8876654
No 187
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.74 E-value=0.37 Score=41.92 Aligned_cols=38 Identities=26% Similarity=0.178 Sum_probs=30.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
|||.|.|+|++|+.+++.|.+++ .+++.|.. +++....
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g-~~v~vid~---~~~~~~~ 38 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK-YGVVIINK---DRELCEE 38 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT-CCEEEEES---CHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC---CHHHHHH
Confidence 38999999999999999998874 78888864 5554433
No 188
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.70 E-value=0.44 Score=46.75 Aligned_cols=30 Identities=30% Similarity=0.388 Sum_probs=25.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G-~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLG-MYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHCC-CEEEEEc
Confidence 48999999999999999998775 8877665
No 189
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=87.47 E-value=0.44 Score=45.02 Aligned_cols=31 Identities=32% Similarity=0.435 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFG-VQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999998764 78777663
No 190
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=87.47 E-value=3.3 Score=42.18 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=27.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|+|-|||.+|+.+++.|.+.+ ..||+|.|
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~G-akVVavsD 275 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRFG-AKCITVGE 275 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEEc
Confidence 58999999999999999998875 89999876
No 191
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.43 E-value=0.45 Score=45.43 Aligned_cols=30 Identities=37% Similarity=0.484 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||.|+|+||+.+.+.+...+ ++|.+.+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFD-CPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998764 7765554
No 192
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.42 E-value=0.45 Score=44.25 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=27.2
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.|.-|||++|+|.+|..+.+.|.+.+ ++|++-|
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G-~~V~v~d 35 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG-YELVVWN 35 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT-CEEEEC-
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC-CeEEEEe
Confidence 57679999999999999999998875 8877655
No 193
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=87.41 E-value=0.99 Score=44.77 Aligned_cols=33 Identities=30% Similarity=0.535 Sum_probs=29.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|+|-|||.+|+.+++.|.++....||+|.|.
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 689999999999999999988335999999985
No 194
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.23 E-value=0.4 Score=43.18 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||+|.|+|.+|+.+.+.+...+ ++|+.++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 59999999999999999988764 7776665
No 195
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.14 E-value=0.55 Score=42.48 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=28.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
++||+|.|+|.||+.+.+.+...+ ++|+.++. +++....
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~~---~~~~~~~ 42 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG-VTVYAFDL---MEANVAA 42 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT-CEEEEECS---SHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHH
Confidence 359999999999999999988764 77665532 4444433
No 196
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=87.14 E-value=0.46 Score=46.65 Aligned_cols=31 Identities=39% Similarity=0.390 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+-
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G-~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFD-VHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhCC-CEEEEEcC
Confidence 48999999999999999998765 88877764
No 197
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.08 E-value=0.48 Score=44.99 Aligned_cols=31 Identities=32% Similarity=0.396 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++|++.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G-~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFG-VKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEECC
Confidence 48999999999999999988764 78776653
No 198
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=87.08 E-value=0.52 Score=44.61 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=26.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G-~~V~~~d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFN-MRILYYSR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhCC-CEEEEECC
Confidence 48999999999999999998765 78776653
No 199
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=87.07 E-value=1.1 Score=37.26 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=57.1
Q ss_pred eeEEEEcC----ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 90 TKVGINGF----GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 90 ikVgINGf----GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
-+|+|.|. |++|+.+++.+.+.+ ++|..||-- . .++ .+.|. .++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G-~~v~~vnp~-----~-----~~~------------------~i~G~--~~~- 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPR-----F-----QGE------------------ELFGE--EAV- 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGG-----G-----TTS------------------EETTE--ECB-
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC-CEEEEeCCC-----c-----ccC------------------cCCCE--Eec-
Confidence 48999997 899999999988875 787777631 0 011 12332 222
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCC
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaP 211 (334)
.+.++++ ..+|+|+=++......+-.+.-.+.|+|.++++.+
T Consensus 62 -~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 -ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp -SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred -CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2344454 26899999988655445556666789999888755
No 200
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=86.87 E-value=0.69 Score=40.94 Aligned_cols=46 Identities=15% Similarity=0.248 Sum_probs=34.7
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe----CCCCCHHHHhhhhc
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN----DPFIDAKYMAYMFK 134 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN----D~~~d~~~~ayLlk 134 (334)
.|++||-|-| .|.||+.+++.|.+++ .+|+++. |+ .+.+.+..+++
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~D~-~d~~~~~~~~~ 53 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE-YDIYPFDKKLLDI-TNISQVQQVVQ 53 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECTTTSCT-TCHHHHHHHHH
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEecccccCC-CCHHHHHHHHH
Confidence 4667999999 9999999999998875 8888875 43 45666666664
No 201
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.62 E-value=0.61 Score=42.93 Aligned_cols=31 Identities=29% Similarity=0.330 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|+|.|+|+||+.+++.+...+ ++|.+.+-
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 48999999999999999998775 78777764
No 202
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.52 E-value=0.51 Score=42.63 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCC-CceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~-d~eiVAIN 120 (334)
+||+|+|+|.+|+.+.+.+.+.+ ..+|+..+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 38 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYN 38 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEc
Confidence 59999999999999999887653 46765553
No 203
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=86.52 E-value=0.66 Score=42.90 Aligned_cols=41 Identities=20% Similarity=0.248 Sum_probs=31.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
.+||+|+|+|.+|+.+.+.|.+.+ ++|+..| .+++....+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~d---r~~~~~~~~~ 49 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIWN---RSPGKAAALV 49 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEEC---SSHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe---CCHHHHHHHH
Confidence 469999999999999999998875 7877664 2555555544
No 204
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=86.35 E-value=1 Score=44.78 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=28.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|+|-|||.+|+.+++.|.+.+ ..||+|.|.
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~G-akVVavsD~ 250 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERLG-MRVVAVATS 250 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEET
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEEcC
Confidence 58999999999999999998874 999999885
No 205
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.16 E-value=0.63 Score=41.30 Aligned_cols=39 Identities=13% Similarity=0.294 Sum_probs=28.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
+||+|.|+|.+|+.+++.+.+.+ .++ .+-|. +++....+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v-~~~~~--~~~~~~~~ 42 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HEL-IISGS--SLERSKEI 42 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEE-EEECS--SHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeE-EEECC--CHHHHHHH
Confidence 59999999999999999988765 454 45553 55544443
No 206
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=85.97 E-value=0.55 Score=45.29 Aligned_cols=31 Identities=23% Similarity=0.226 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCce-EEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVD-VVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~e-iVAIND 121 (334)
.+|||+|+|+||+.+.+.+...+ ++ |++.+-
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G-~~~V~~~d~ 196 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFN-PKELLYYDY 196 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGC-CSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CcEEEEECC
Confidence 48999999999999999998764 76 777653
No 207
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=85.94 E-value=0.71 Score=42.95 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=30.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||+|+|+|.+|+.+.+.+.+.+ ++|+..|- +++....+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr---~~~~~~~l~ 71 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG-YALQVWNR---TPARAASLA 71 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT-CEEEEECS---CHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHHHH
Confidence 59999999999999999998875 78766642 555544443
No 208
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=85.98 E-value=0.15 Score=44.86 Aligned_cols=43 Identities=28% Similarity=0.229 Sum_probs=31.3
Q ss_pred cccCCccccCCCCCCceeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 74 ATEIPPTIQKSRSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 74 ~~~~~~~~~~~~~~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
++++|-....+ .|.+||+|.|+|.||+.+.+.|.+.+ .+|..+
T Consensus 6 ~~~~~~~~~~~--~~~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~ 48 (201)
T 2yjz_A 6 ADEFPLTVDSS--EKQGVVCIFGTGDFGKSLGLKMLQCG-YSVVFG 48 (201)
Confidence 45667666555 44469999999999999999887654 554444
No 209
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.83 E-value=0.7 Score=42.58 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|+|.|+|+||+.+++.+...+ ++|.+.+-
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 48999999999999999998775 78777764
No 210
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=85.81 E-value=1.3 Score=44.08 Aligned_cols=32 Identities=31% Similarity=0.437 Sum_probs=29.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|+|-|||.+|+.+++.|.+.. ..||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G-akVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG-AKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 58999999999999999998874 999999985
No 211
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=85.29 E-value=0.37 Score=44.18 Aligned_cols=31 Identities=16% Similarity=0.010 Sum_probs=27.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||+|+|.|+||..+.+.|.+.+ ++|++++.
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G-~~V~~~~~ 37 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVG-HYVTVLHA 37 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTT-CEEEECSS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCC-CEEEEecC
Confidence 59999999999999999998875 88888775
No 212
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=85.26 E-value=0.74 Score=42.98 Aligned_cols=86 Identities=22% Similarity=0.249 Sum_probs=55.1
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+||+|.|. |+.|+.+++.+.+. ++++|+.-+|.. . | . .+.| +.++. +
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~-~-------------g----~---------~i~G--~~vy~--s 55 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGK-G-------------G----M---------EVLG--VPVYD--T 55 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC-T-------------T----C---------EETT--EEEES--S
T ss_pred CEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCC-C-------------C----c---------eECC--EEeeC--C
Confidence 59999995 99999999988876 588764333310 0 0 0 1223 22332 1
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
.++++ .+.++|+++.++......+.++..++.|+|.+|+
T Consensus 56 l~el~-~~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 56 VKEAV-AHHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp HHHHH-HHSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 12221 0126899999998877777778788899986554
No 213
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.21 E-value=0.7 Score=45.79 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G-~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLG-MTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998775 8877765
No 214
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.95 E-value=0.97 Score=40.26 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=29.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
+||+|.|.|++|+.+.+.+...+ +++|.+-|. +.+....
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~--~~~~~~~ 49 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG-FRIVQVYSR--TEESARE 49 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CCEEEEECS--SHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeC--CHHHHHH
Confidence 49999999999999999988764 776666663 5554433
No 215
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=84.68 E-value=0.82 Score=43.92 Aligned_cols=41 Identities=17% Similarity=0.309 Sum_probs=31.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhc
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK 134 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlk 134 (334)
+||||+|+|.+|+.+.+.|.+.+ ++|+..|- +++....+.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr---~~~~~~~l~~ 63 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG-HECVVYDL---NVNAVQALER 63 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS---CHHHHHHHHT
T ss_pred CEEEEECchHHHHHHHHHHHhCC-CEEEEEeC---CHHHHHHHHH
Confidence 69999999999999999998875 78776653 5555555443
No 216
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=84.51 E-value=0.87 Score=41.44 Aligned_cols=40 Identities=8% Similarity=0.101 Sum_probs=30.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||+|.|+|.+|+.+.+.+.+.+ ++|+..+ .+.+....+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d---~~~~~~~~~~ 43 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG-YLLNVFD---LVQSAVDGLV 43 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC---SSHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCC-CeEEEEc---CCHHHHHHHH
Confidence 59999999999999999998875 7877664 2555554443
No 217
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.43 E-value=0.79 Score=35.99 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|.|.|.|.+|+.+++.|.+.+ .+++.+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMG-HEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 37999999999999999998875 67666643
No 218
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=84.18 E-value=0.66 Score=43.50 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=23.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
++||+|.|.|.||..++..+...+-+ +|+.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~ 37 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLI 37 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEE
Confidence 46999999999999988888765423 44444
No 219
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.15 E-value=1.2 Score=43.64 Aligned_cols=39 Identities=28% Similarity=0.500 Sum_probs=31.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.+|-|.|+||+|+.+.+.|.+++ +++++|.. |++.+..+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~---d~~~v~~~ 43 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLDH---DPDHIETL 43 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEEC---CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHHH
Confidence 38999999999999999999875 88888853 66655444
No 220
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=84.14 E-value=1 Score=40.19 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=26.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+||+|.|+|.+|+.+.+.|.+.+ ++|+..+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~ 49 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIGT 49 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 469999999999999999998875 7776665
No 221
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=83.91 E-value=0.99 Score=40.91 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||+|.|+|.+|+.+.+.+.+.+ ++|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEEc
Confidence 49999999999999999998875 7876654
No 222
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=83.70 E-value=1 Score=40.32 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=29.0
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
||+|.|+|.+|+.+.+.+.+.+ ++|+.+ | .+.+....+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~-~--~~~~~~~~~ 39 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG-HYLIGV-S--RQQSTCEKA 39 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEE-C--SCHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCC-CEEEEE-E--CCHHHHHHH
Confidence 8999999999999999998775 677666 4 255554443
No 223
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=83.70 E-value=1 Score=42.49 Aligned_cols=93 Identities=13% Similarity=0.232 Sum_probs=51.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCCC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP~ 170 (334)
+|.|.|.|.||..+++.+...+ .+++++.. +.+....+.+ .+|- +. .++-+. .....
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~---~~~~~~~~~~---~lGa---~~--------v~~~~~-----~~~~~ 246 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG-SKVTVIST---SPSKKEEALK---NFGA---DS--------FLVSRD-----QEQMQ 246 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES---CGGGHHHHHH---TSCC---SE--------EEETTC-----HHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHH---hcCC---ce--------EEeccC-----HHHHH
Confidence 7999999999999999998775 67777653 2233323221 1220 00 111000 00000
Q ss_pred CCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEe
Q 019933 171 EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 171 ~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIIS 209 (334)
++. .++|+||||+|.-...+.+-..++.|.+-|.+.
T Consensus 247 ~~~---~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 247 AAA---GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp HTT---TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECC
T ss_pred Hhh---CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEc
Confidence 111 279999999997655555656666554333333
No 224
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=83.46 E-value=0.92 Score=45.21 Aligned_cols=90 Identities=16% Similarity=0.094 Sum_probs=53.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
.||.|.|.|.+|+.+++.|.+.+.++|+.+|. +.+...-+.+. .+ +. .+.+ ...|+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R---~~~ka~~la~~---~~-----~~------------~~~~-D~~d~ 79 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAANDDINVTVACR---TLANAQALAKP---SG-----SK------------AISL-DVTDD 79 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSTTEEEEEEES---SHHHHHHHHGG---GT-----CE------------EEEC-CTTCH
T ss_pred CEEEEECChHHHHHHHHHHHhCCCCeEEEEEC---CHHHHHHHHHh---cC-----Cc------------EEEE-ecCCH
Confidence 58999999999999999999876688766664 44433333321 11 00 0000 00111
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
+++.=.-.++|+||.|+|.+...+-....++.|.
T Consensus 80 ~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 80 SALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp HHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 1110000268999999998765555556677776
No 225
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.46 E-value=0.96 Score=44.73 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=31.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
|++||+|.|.|.+|..+...+.+.+ ++|+.++ .+.+.+..|-
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G-~~V~~~D---~~~~~v~~l~ 42 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG-ANVRCID---TDRNKIEQLN 42 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC---SCHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC-CEEEEEE---CCHHHHHHHH
Confidence 4569999999999999999988875 7877664 3555554443
No 226
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.45 E-value=0.88 Score=41.16 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=25.6
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcC-----CCceEEEEe
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFR-----DDVDVVAVN 120 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~-----~d~eiVAIN 120 (334)
.|++||+|.|.|.+|..+...|.+. +..+|..++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 3456999999999999999888765 215666665
No 227
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=83.35 E-value=1.1 Score=40.24 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=28.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCC-CceEEEEeCCCCCHHHHhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~-d~eiVAIND~~~d~~~~ay 131 (334)
+||+|+|+|.||+.+.+.+...+ +.+|+++ |. +.+....
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~-d~--~~~~~~~ 41 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGY-DI--NPESISK 41 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEE-CS--CHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEE-eC--CHHHHHH
Confidence 48999999999999999998765 2266655 42 4544433
No 228
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=83.19 E-value=0.91 Score=42.84 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
+||+|.|.|.+|..+...+...+-++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeC
Confidence 59999999999999988888775347 555564
No 229
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=83.19 E-value=1.3 Score=40.83 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=25.6
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|..||+|+| +|.||..+.+.+.+.+ ++|..++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG-YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 445999999 9999999999998765 5665553
No 230
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.17 E-value=0.82 Score=40.46 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=20.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRD 112 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~ 112 (334)
+||+|.|.|.+|..+.+.+.+.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHHCC
Confidence 59999999999999999887654
No 231
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=83.13 E-value=1.2 Score=40.79 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||+|.|+|.+|+.+.+.+...+ ++|+.++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG-HTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCC-CEEEEEe
Confidence 59999999999999999988764 6766554
No 232
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=83.05 E-value=1 Score=45.46 Aligned_cols=31 Identities=42% Similarity=0.559 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|||.|+|+||+.+.+.+...+ ++|++.+-
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G-~~V~~~d~ 173 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFG-AYVVAYDP 173 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEECC
Confidence 58999999999999999998764 88877753
No 233
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.01 E-value=4.3 Score=37.51 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=70.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
-+|.|+|.|.||...++++......+|+++.. +.+...++.++ |- + ..++. ++
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~l----Ga---~--------~~i~~--------~~- 225 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREV----GA---D--------AAVKS--------GA- 225 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHT----TC---S--------EEEEC--------ST-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHc----CC---C--------EEEcC--------CC-
Confidence 37999999999999999887664467777743 34444444332 21 0 01110 00
Q ss_pred CCCCC--------CccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchh
Q 019933 170 AEIPW--------GDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTT 241 (334)
Q Consensus 170 ~~i~W--------~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTT 241 (334)
+| +..++|+||||+|.-.+.+.+-..++.|-+-|++..+... +.- ++...+..+..+...-.-+-
T Consensus 226 ---~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~---~~~~~~~~~~~i~g~~~~~~ 298 (345)
T 3jv7_A 226 ---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-HAK---VGFFMIPFGASVVTPYWGTR 298 (345)
T ss_dssp ---THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-CEE---ESTTTSCTTCEEECCCSCCH
T ss_pred ---cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-CCC---cCHHHHhCCCEEEEEecCCH
Confidence 11 1238999999999765555666666655433333322221 211 22233333344544433344
Q ss_pred hhHHHHHHHHhh
Q 019933 242 NCLAPLAKVVHE 253 (334)
Q Consensus 242 ncLAPvlKvL~d 253 (334)
..+.-+++.+.+
T Consensus 299 ~~~~~~~~l~~~ 310 (345)
T 3jv7_A 299 SELMEVVALARA 310 (345)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 566666766654
No 234
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.77 E-value=0.99 Score=40.33 Aligned_cols=29 Identities=24% Similarity=0.259 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||+|.|+|.+|+.+.+.+.. + ++|+.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g-~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R-FPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T-SCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC-C-CeEEEEe
Confidence 489999999999999999887 4 7866554
No 235
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.75 E-value=1.2 Score=41.13 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=25.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
++||+|.|.|.||..+.+.|...+ .+|+.++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g-~~V~~~~ 34 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG-QSVLAWD 34 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 369999999999999999888764 6766654
No 236
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.58 E-value=1.1 Score=38.18 Aligned_cols=31 Identities=32% Similarity=0.380 Sum_probs=27.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|.| .|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEc
Confidence 5999999 9999999999999886 78877754
No 237
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=82.56 E-value=1.4 Score=37.71 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=25.7
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||+|.| .|.+|+.+.+.+.+.+ .+|+.++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG-HEIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 899999 9999999999998775 78777753
No 238
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=82.47 E-value=1.1 Score=42.91 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=31.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
..||+|+|+|.||..+.+.+...+ ++|++.+- +++.+..+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~dr---~~~~~~~a~ 48 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGYNR---SRSGAKSAV 48 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEECS---CHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 358999999999999999998875 78776653 555554443
No 239
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.02 E-value=1.4 Score=37.08 Aligned_cols=30 Identities=40% Similarity=0.552 Sum_probs=26.7
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 899999 9999999999999886 78888764
No 240
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=81.95 E-value=1.2 Score=41.71 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=29.3
Q ss_pred Cce-eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 88 GNT-KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 88 M~i-kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
|+| ||+|.|.|.+|..+...|.+.+ .+|..++. +.+.+..+
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G-~~V~~~~r---~~~~~~~l 54 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC-REVCVWHM---NEEEVRLV 54 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE-EEEEEECS---CHHHHHHH
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC-CEEEEEEC---CHHHHHHH
Confidence 444 9999999999999999887664 67665643 44444333
No 241
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=81.88 E-value=1.5 Score=36.24 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|.| .|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 4899999 8999999999999875 78777754
No 242
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=81.70 E-value=1.1 Score=40.24 Aligned_cols=29 Identities=17% Similarity=0.346 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
||+|.|+|.+|+.+.+.+.+.+ ++|...+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~~~~ 30 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLIIYD 30 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEEEEe
Confidence 8999999999999999998765 6766554
No 243
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=81.64 E-value=1.1 Score=41.22 Aligned_cols=33 Identities=27% Similarity=0.235 Sum_probs=28.2
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++||.|-| .|.||+.+++.|.+++..+|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC
Confidence 36999999 9999999999999874588888764
No 244
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.43 E-value=1.5 Score=37.17 Aligned_cols=30 Identities=33% Similarity=0.468 Sum_probs=26.4
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG-HEVLAVVR 32 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEe
Confidence 899999 8999999999999885 78888754
No 245
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=81.30 E-value=1.3 Score=43.99 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=66.3
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCC-ceEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCC---eEE--E--
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDD-VDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDS---TLE--I-- 156 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d-~eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~---~L~--i-- 156 (334)
.|+ +|.|.| +|.||...++.+...+| |+|+|+.. ..+.+.++-..+ |.. .-+.+.++. .|. +
T Consensus 8 ~~k-~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~a-g~nv~~L~~q~~~f~p------~~v~v~d~~~~~~L~~~l~~ 79 (406)
T 1q0q_A 8 GMK-QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA-GKNVTRMVEQCLEFSP------RYAVMDDEASAKLLKTMLQQ 79 (406)
T ss_dssp -CE-EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE-SSCHHHHHHHHHHHCC------SEEEESSHHHHHHHHHHHHH
T ss_pred Cce-eEEEEccCcHHHHHHHHHHHhCCCccEEEEEEc-CCCHHHHHHHHHHhCC------CEEEEcCHHHHHHHHHHhhc
Confidence 454 999999 99999999999988764 99999876 356665554432 211 112221100 000 0
Q ss_pred CCEEEEEEeccC-CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEe
Q 019933 157 NGKLIKVFSKRD-PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 157 nGk~I~V~~~~d-P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIIS 209 (334)
.+..++++...+ ..++- ....+|+|+-+.-.+....-.-+.+++| |++.+.
T Consensus 80 ~~~~~~v~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLA 131 (406)
T 1q0q_A 80 QGSRTEVLSGQQAACDMA-ALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLA 131 (406)
T ss_dssp TTCCCEEEESHHHHHHHH-TCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEEEC
T ss_pred CCCCcEEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CeEEEe
Confidence 122234433221 11110 0125899999988787777777778888 565553
No 246
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=81.29 E-value=1.5 Score=38.30 Aligned_cols=29 Identities=17% Similarity=0.222 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
+||+|.|.|.+|..+.+.+.+.+ .+|..+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g-~~V~~~ 48 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAG-HEVTYY 48 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE
Confidence 59999999999999999988764 565544
No 247
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=81.18 E-value=1.3 Score=39.28 Aligned_cols=30 Identities=30% Similarity=0.488 Sum_probs=24.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
||+|.|+|.+|..+.+.|.+.+ ++|+. .|.
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 8999999999999999998764 77665 453
No 248
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.14 E-value=1.3 Score=39.27 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=27.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|-|.|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG-HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 58999999999999999999875 78877754
No 249
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=81.03 E-value=1.5 Score=38.01 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=27.4
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+.+|.|-| .|.||+.+++.|.++++.+|+++..
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 46899999 9999999999999886577776653
No 250
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=80.98 E-value=3.3 Score=38.68 Aligned_cols=89 Identities=20% Similarity=0.236 Sum_probs=56.6
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEE-EEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVV-AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiV-AIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+.||+|.| .|+.|+.+++.+.+. ++++| .|| |.. . | . .+.| +.++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~Vn-P~~-~-------------g-----------~--~i~G--~~vy~- 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVT-PGK-G-------------G-----------Q--NVHG--VPVFD- 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEEC-TTC-T-------------T-----------C--EETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeC-CCC-C-------------C-----------c--eECC--EeeeC-
Confidence 35899999 599999999999886 47766 455 410 0 0 0 1123 23332
Q ss_pred cCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE-eCC
Q 019933 167 RDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI-SAP 211 (334)
Q Consensus 167 ~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII-SaP 211 (334)
+.++++= +..+|+++.++......+.+...+++|+|.+|+ +..
T Consensus 61 -sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 104 (294)
T 2yv1_A 61 -TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEH 104 (294)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSC
T ss_pred -CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 2222220 126899999999887778888888899985554 543
No 251
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=80.96 E-value=1.2 Score=40.39 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=28.1
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~-d~eiVAIND 121 (334)
.+||.|-| .|.||+.+++.|.+++ +++|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 46899999 8999999999998864 588888865
No 252
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=80.85 E-value=1.4 Score=44.33 Aligned_cols=100 Identities=16% Similarity=0.255 Sum_probs=62.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC--------CCCHHHHhhhhcc-ccccccCCCeEEEeCCCeEEECCEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP--------FIDAKYMAYMFKY-DSTHGVFKGTINVVDDSTLEINGKL 160 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~--------~~d~~~~ayLlkY-DSthGkf~~~v~~e~~~~L~inGk~ 160 (334)
.+|+|-|||.+|..+++.|.+.+ -.||+|.|. ..|.+.+..|++. .+..|+...- .++ .+.+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~G-akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~--~~~-----~g~~- 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEFG-ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADY--AKE-----FGLV- 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHH--HHH-----HTCE-
T ss_pred CEEEEeCCChHHHHHHHHHHhcC-CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccc--ccc-----CCcE-
Confidence 58999999999999999998875 789988753 2455666666542 1211111000 000 0111
Q ss_pred EEEEeccCCCCCCCCccCccEEEec-cCCCCCHHHHHHHHHcCCCE
Q 019933 161 IKVFSKRDPAEIPWGDYGVDYVVES-SGVFTTIAKASAHMKGGAKK 205 (334)
Q Consensus 161 I~V~~~~dP~~i~W~~~gvDiVvEs-TG~f~t~e~a~~hl~aGaKk 205 (334)
... +++ .|. ..+|+.+=| ++.-.+.+.+..-...|||-
T Consensus 307 --~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 307 --YLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp --EEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred --Eec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 111 122 253 589999988 67778888888766678864
No 253
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=80.77 E-value=3.9 Score=37.93 Aligned_cols=30 Identities=30% Similarity=0.463 Sum_probs=23.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
+||+|.|.|.+|..++..+...+-+ +|+-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 3999999999999999888776522 54444
No 254
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=80.70 E-value=1 Score=40.76 Aligned_cols=39 Identities=23% Similarity=0.240 Sum_probs=29.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
+||+|.|+|.+|+.+.+.+.+.+ ++|+..|- +++....+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~dr---~~~~~~~~ 40 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWNR---NPAKCAPL 40 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEECS---SGGGGHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEcC---CHHHHHHH
Confidence 49999999999999999988765 77766643 44444333
No 255
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=80.61 E-value=2.7 Score=39.03 Aligned_cols=32 Identities=16% Similarity=0.298 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcC-CCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~-~d~eiVAIND 121 (334)
.+|-|-| .|.||+.+++.|.++ +..+|+++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 5899999 999999999999887 5237777653
No 256
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=80.53 E-value=6.5 Score=36.47 Aligned_cols=97 Identities=24% Similarity=0.238 Sum_probs=54.1
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~-eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
+|.|+|.|.||...++++...+ . +|+++.. +.+.+.++.+ +|- + ..++-+.-.+.+ ..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~---~~~~~~~~~~----lGa---~--------~vi~~~~~~~~~--~v 227 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG-AGRIFAVGS---RKHCCDIALE----YGA---T--------DIINYKNGDIVE--QI 227 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-CSSEEEECC---CHHHHHHHHH----HTC---C--------EEECGGGSCHHH--HH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CcEEEEECC---CHHHHHHHHH----hCC---c--------eEEcCCCcCHHH--HH
Confidence 7999999999999999988775 5 6777632 3444444332 221 0 111110000000 00
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEe
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIIS 209 (334)
.++. +..++|+||||+|.-...+.+-..++.|-+-|++.
T Consensus 228 ~~~t-~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 228 LKAT-DGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp HHHT-TTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECC
T ss_pred HHHc-CCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEec
Confidence 0000 12379999999998666666666777665434443
No 257
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=80.24 E-value=1.4 Score=36.97 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=27.1
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
|.+||.|.| .|.||+.+++.|.+++.+ +|+++.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~ 38 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 38 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCB
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEe
Confidence 446899999 999999999999998743 776654
No 258
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.20 E-value=1.6 Score=43.22 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=31.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
|||-|.|+|++|+.+.+.|.+.+ .+++.|.. |++.+-.|-
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~---d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN-NDITIVDK---DGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT-EEEEEEES---CHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCEEEEEC---CHHHHHHHH
Confidence 59999999999999999987664 78877753 666655543
No 259
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=80.10 E-value=1.7 Score=38.88 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=26.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|||-|-| +|-||+.+++.|.+++ .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999999885 78888753
No 260
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=80.07 E-value=1.5 Score=44.45 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|+||+.+.+.+...+ ++|++.+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G-~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLG-ATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998775 7876664
No 261
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=79.65 E-value=1.7 Score=40.33 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=26.4
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
-|.+||+|.|.|.+|..+.+.|.+.+ .+|..++.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~r 45 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENG-EEVILWAR 45 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 46679999999999999999988764 67665653
No 262
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=79.62 E-value=2.4 Score=44.46 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|+|.|.+|..+...+...+ ++|+.++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG-~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN-YPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC-CEEEEEE
Confidence 48999999999999999988775 7876664
No 263
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=79.25 E-value=1.6 Score=40.05 Aligned_cols=41 Identities=7% Similarity=0.152 Sum_probs=29.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCc---eEEEEeCCCCCHHHHhhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDV---DVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~---eiVAIND~~~d~~~~ayLl 133 (334)
++||+|+|.|.+|+.+.+.+.+.+ + +|+.. |. +.+....+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~v~-dr--~~~~~~~l~ 46 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG-YDPNRICVT-NR--SLDKLDFFK 46 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT-CCGGGEEEE-CS--SSHHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC-CCCCeEEEE-eC--CHHHHHHHH
Confidence 369999999999999999998875 4 55544 42 444444443
No 264
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.25 E-value=2 Score=36.57 Aligned_cols=30 Identities=17% Similarity=0.323 Sum_probs=25.1
Q ss_pred eEEEEc-CChhHHHHHHHHH-cCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAA-FRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~-~~~d~eiVAIND 121 (334)
+|.|-| .|.||+.+++.|. ++ ..+|+++..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-CCEEEEEES
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC-CceEEEEec
Confidence 499999 9999999999998 55 478877754
No 265
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=79.19 E-value=2.6 Score=39.46 Aligned_cols=89 Identities=21% Similarity=0.278 Sum_probs=57.6
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEE-EEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEec
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVV-AVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSK 166 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiV-AIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~ 166 (334)
+.||.|.| .|+.|+.+++.+.+. ++++| .|| |.. . | + .+.| +.++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~Vn-P~~-~-------------g-----------~--~i~G--~~vy~- 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVT-PGK-G-------------G-----------S--EVHG--VPVYD- 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC-TTC-T-------------T-----------C--EETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeC-CCC-C-------------C-----------c--eECC--EeeeC-
Confidence 35899999 599999999998876 47765 455 410 0 0 0 1123 23332
Q ss_pred cCCCCCCCCccC-ccEEEeccCCCCCHHHHHHHHHcCCCEEEE-eCC
Q 019933 167 RDPAEIPWGDYG-VDYVVESSGVFTTIAKASAHMKGGAKKVVI-SAP 211 (334)
Q Consensus 167 ~dP~~i~W~~~g-vDiVvEsTG~f~t~e~a~~hl~aGaKkVII-SaP 211 (334)
+.++++ .+.+ +|+++.++......+.++..++.|+|.+|+ +..
T Consensus 61 -sl~el~-~~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G 105 (297)
T 2yv2_A 61 -SVKEAL-AEHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEG 105 (297)
T ss_dssp -SHHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCC
T ss_pred -CHHHHh-hcCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 122222 0113 899999999988888888888999996554 543
No 266
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=79.18 E-value=2.4 Score=33.86 Aligned_cols=33 Identities=24% Similarity=0.238 Sum_probs=29.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|.|.|.|..|+.+++.+...+.++++++=|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 489999999999999999987767999998773
No 267
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=78.88 E-value=1.9 Score=38.20 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=25.2
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||+|.|.|.+|..+.+.|.+.+ .+|..++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG-HEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CCEEEEEc
Confidence 8999999999999999988765 67766653
No 268
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=78.75 E-value=1.9 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=25.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||+|.|.|.||..+...|.+.+ .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 5579999999999999999888764 57666654
No 269
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=78.48 E-value=1.7 Score=38.80 Aligned_cols=33 Identities=24% Similarity=0.174 Sum_probs=27.4
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+.+|.|-| +|.||+.+++.|.++++.+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 35899999 8999999999998875578877753
No 270
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.34 E-value=1.9 Score=40.73 Aligned_cols=86 Identities=17% Similarity=0.251 Sum_probs=50.1
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCCC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP~ 170 (334)
+|.|+|.|.||..+++++...+ .+|+++.. +.+.+.++.+ +|- + ..++-+. +...+
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~---~~~~~~~a~~----lGa---~--------~vi~~~~-----~~~~~ 252 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG-AHVVAFTT---SEAKREAAKA----LGA---D--------EVVNSRN-----ADEMA 252 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEES---SGGGHHHHHH----HTC---S--------EEEETTC-----HHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHH----cCC---c--------EEecccc-----HHHHH
Confidence 7999999999999999988775 67766642 2333333322 221 0 0111000 00001
Q ss_pred CCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 171 EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 171 ~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
++. .++|+||||+|.-...+.+-..++.|-
T Consensus 253 ~~~---~g~Dvvid~~g~~~~~~~~~~~l~~~G 282 (369)
T 1uuf_A 253 AHL---KSFDFILNTVAAPHNLDDFTTLLKRDG 282 (369)
T ss_dssp TTT---TCEEEEEECCSSCCCHHHHHTTEEEEE
T ss_pred Hhh---cCCCEEEECCCCHHHHHHHHHHhccCC
Confidence 121 389999999998666666655555444
No 271
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=78.16 E-value=4.7 Score=37.43 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=23.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCC-CceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~-d~eiVAI 119 (334)
+||+|.|.|.+|..+...+...+ ..+|+.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 38999999999999888887652 3455444
No 272
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=78.00 E-value=2.2 Score=38.50 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEec
Confidence 4999999 9999999999999875 78877754
No 273
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=77.90 E-value=1.6 Score=41.44 Aligned_cols=29 Identities=31% Similarity=0.534 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
+||+|.|.|.+|..++..+..++ + +|+-+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~-~~~v~l~ 35 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQ-LGDVVLF 35 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CceEEEE
Confidence 59999999999999998887765 4 65444
No 274
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=77.89 E-value=1.8 Score=42.89 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=30.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
++||||+|+|.+|+.+.+.+.+.+ ++|...|- +.+....+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~dr---~~~~~~~l~ 45 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG-YTVAIYNR---TTSKTEEVF 45 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC-CEEEEEcC---CHHHHHHHH
Confidence 369999999999999999998775 77666653 455444443
No 275
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=77.77 E-value=1.5 Score=44.26 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|+||+.+.+.+...+ ++|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G-~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLG-ARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCc-CEEEEEe
Confidence 48999999999999999998764 7876665
No 276
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=77.48 E-value=2.2 Score=39.39 Aligned_cols=32 Identities=31% Similarity=0.315 Sum_probs=25.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||+|.|.|.||..+...|. .+ .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC-CceEEEEC
Confidence 5679999999999999988888 54 67666643
No 277
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=77.44 E-value=1.9 Score=40.57 Aligned_cols=31 Identities=29% Similarity=0.236 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||+|+|+|.||+.+.+.+...+ ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEEC
Confidence 48999999999999999998775 77665543
No 278
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=77.42 E-value=1.7 Score=40.34 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
+||+|+|+|.+|..+.+.|.+.+ + +|+..|
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG-AIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-CCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CCeEEEEc
Confidence 59999999999999999998775 6 655544
No 279
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=77.12 E-value=2.2 Score=37.88 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=27.4
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 346999999 8999999999999885 78877754
No 280
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=77.11 E-value=2 Score=42.91 Aligned_cols=29 Identities=17% Similarity=0.237 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
.+|+|+|+|+||+.+.+.+...+ ++|++.
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G-a~Viv~ 240 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG-ARVVVT 240 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEE
Confidence 58999999999999999998875 776554
No 281
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=77.10 E-value=2 Score=43.33 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
.+|+|.|||+||+.+.+.+...+ ++|++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG-a~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG-ARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEE
Confidence 48999999999999999998775 776555
No 282
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=76.95 E-value=1.1 Score=36.33 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHH
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ 129 (334)
.||+|.|.|.+|+.+++.+.+++ ++ |.|-+. +.+..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g-~~-v~v~~r--~~~~~ 57 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ-YK-VTVAGR--NIDHV 57 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT-CE-EEEEES--CHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CE-EEEEcC--CHHHH
Confidence 49999999999999999887754 88 555542 44443
No 283
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=76.90 E-value=2.3 Score=39.39 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=27.1
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.|+.+|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 26 ~M~k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 26 EPRKIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred hhCCeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 4545899999 8999999999999875 78877753
No 284
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=76.80 E-value=2.5 Score=37.85 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=26.6
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|.++|.|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 445899999 8999999999999875 7877764
No 285
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=76.79 E-value=2 Score=37.97 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=27.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
+||+|.|.|.+|+.+.+.+.+.+..+|..+ | .+++....+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~-~--r~~~~~~~~ 40 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIA-N--RGAEKRERL 40 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEE-C--SSHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEE-C--CCHHHHHHH
Confidence 389999999999999998876532455444 4 245544443
No 286
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=76.62 E-value=2.1 Score=39.74 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=25.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCC---ceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDD---VDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d---~eiVAIN 120 (334)
++||+|+|.|.+|..+.+.|.+.+. .+|...|
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~ 56 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASS 56 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEEC
Confidence 3599999999999999999887641 5666554
No 287
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=76.57 E-value=2.4 Score=39.59 Aligned_cols=41 Identities=7% Similarity=0.015 Sum_probs=31.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
| .|||++|+|++|+.+.+.|.+.+ +++..-|- +++...-|.
T Consensus 3 M-~kIgfIGlG~MG~~mA~~L~~~G-~~v~v~dr---~~~~~~~l~ 43 (300)
T 3obb_A 3 M-KQIAFIGLGHMGAPMATNLLKAG-YLLNVFDL---VQSAVDGLV 43 (300)
T ss_dssp C-CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS---SHHHHHHHH
T ss_pred c-CEEEEeeehHHHHHHHHHHHhCC-CeEEEEcC---CHHHHHHHH
Confidence 5 39999999999999999998875 88776653 555555544
No 288
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.45 E-value=2 Score=39.58 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=24.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||+|.|.|.+|..+...|.+.+ .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 5579999999999999999888764 56655543
No 289
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=76.33 E-value=1.7 Score=40.97 Aligned_cols=96 Identities=17% Similarity=0.242 Sum_probs=55.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
-+|.|+| .|.||...++++......+|+++.. +.+...++.+ .|. + .+++.+. .+ . ..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa---d--------~vi~~~~-~~-~-~~ 231 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA---H--------HVIDHSK-PL-A-AE 231 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC---S--------EEECTTS-CH-H-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC---C--------EEEeCCC-CH-H-HH
Confidence 4799999 9999999999887633468877743 4444544433 220 1 1121110 00 0 00
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
..++ ...++|+||||+|.-...+.+-..++.|-+-|++
T Consensus 232 v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 VAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 1112 2348999999999654455555667666544434
No 290
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=76.22 E-value=7.5 Score=37.16 Aligned_cols=142 Identities=18% Similarity=0.119 Sum_probs=70.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccc-cCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHG-VFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthG-kf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||+|.|.|.||..++..+..++-+.-+.+-|. +.+.. .-...|-.|+ .|.. ... | ....|
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di--~~~~~-~g~a~DL~~~~~~~~------~~~-------i--~~t~d 83 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV--MEDKL-KGEMMDLEHGSLFLH------TAK-------I--VSGKD 83 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS--CHHHH-HHHHHHHHHHGGGSC------CSE-------E--EEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC--CHHHH-HHHHHHhhhhhhccc------CCe-------E--EEcCC
Confidence 599999999999999988877653333344453 33211 1111122232 1211 011 1 11234
Q ss_pred CCCCCCCccCccEEEeccCCCCC---------HHHH-------HHHHH--cCCCEEEEeCCCCCCCeEEeecCccccCCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTT---------IAKA-------SAHMK--GGAKKVVISAPSADAPMFVVGVNEKTYKPN 230 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t---------~e~a-------~~hl~--aGaKkVIISaPs~D~p~~V~GVN~~~y~~~ 230 (334)
++++ .++|+||.+.|.-.. .+.+ +.-.+ -.++-+++|+|.. .-+.+. ..+..|. .
T Consensus 84 ~~~~----~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd-i~t~~~-~k~sg~p-~ 156 (330)
T 3ldh_A 84 YSVS----AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT-DKNKQD-WKLSGLP-M 156 (330)
T ss_dssp SCSC----SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH-HHHHHH-HHHHCCC-G
T ss_pred HHHh----CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH-HHHHHH-HHHhCCC-H
Confidence 5544 289999999886432 1111 11112 2343455587742 100000 0111232 3
Q ss_pred CCEEecCCchhhhHHHHHHHHhhhcCee
Q 019933 231 MNIVSNASCTTNCLAPLAKVVHEEFGIL 258 (334)
Q Consensus 231 ~~IVSnASCTTncLAPvlKvL~d~fGI~ 258 (334)
.+|| ..||+-=-+.+-..|-+.+|+.
T Consensus 157 ~rVi--G~gt~LDs~R~~~~lA~~lgv~ 182 (330)
T 3ldh_A 157 HRII--GSGCNLDSARFRYLMGERLGVH 182 (330)
T ss_dssp GGEE--CCTTHHHHHHHHHHHHHHHTSC
T ss_pred HHee--cccCchhHHHHHHHHHHHhCCC
Confidence 4666 3666644466777788888875
No 291
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=75.70 E-value=2.4 Score=40.31 Aligned_cols=33 Identities=30% Similarity=0.288 Sum_probs=25.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|++||+|.|.|.+|..+...|......+|..+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 446999999999999999888664246766664
No 292
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=75.65 E-value=1.5 Score=40.13 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=23.1
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|++||+|.|.|.||..+...|.+.+ .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL-PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 5679999999999999988887654 3444443
No 293
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=75.61 E-value=0.9 Score=45.01 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=55.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECC--EEEEEEecc
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEING--KLIKVFSKR 167 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inG--k~I~V~~~~ 167 (334)
-||-|.|-|+||..+++.|.++ +++.-|-. |.+..-+|-. .++ +.++++| ....++.+.
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~---d~~r~~~la~------~l~--------~~~Vi~GD~td~~~L~ee 296 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQT--YSVKLIER---NLQRAEKLSE------ELE--------NTIVFCGDAADQELLTEE 296 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEEES---CHHHHHHHHH------HCT--------TSEEEESCTTCHHHHHHT
T ss_pred cEEEEEcchHHHHHHHHHhhhc--CceEEEec---CHHHHHHHHH------HCC--------CceEEeccccchhhHhhc
Confidence 4899999999999999998654 56555543 4444433321 111 2445544 223333333
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHH-HHHHcCCCEEEE
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKAS-AHMKGGAKKVVI 208 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~-~hl~aGaKkVII 208 (334)
.. ..+|+++-.|+...+.=.+. ...+.|+||+|.
T Consensus 297 ~i-------~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 297 NI-------DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp TG-------GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred Cc-------hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 22 26799999999754432222 233579998765
No 294
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=75.54 E-value=6.8 Score=36.63 Aligned_cols=142 Identities=15% Similarity=0.166 Sum_probs=74.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
-+|.|+|.|.||...++++...+ .+++++.. +.+.+.++.+ +|- + ..+ . .+.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa---~--------~vi--------~-~~~ 242 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG-AEVIVTSS---SREKLDRAFA----LGA---D--------HGI--------N-RLE 242 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHH----HTC---S--------EEE--------E-TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEec---CchhHHHHHH----cCC---C--------EEE--------c-CCc
Confidence 37999999999999999998775 68877743 4444444332 221 0 011 1 000
Q ss_pred CCC----C--CCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccc-cCCCCCEEecCCchhh
Q 019933 170 AEI----P--WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKT-YKPNMNIVSNASCTTN 242 (334)
Q Consensus 170 ~~i----~--W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~-y~~~~~IVSnASCTTn 242 (334)
.++ . -+..++|+||||+| -...+.+-..++.|-+-|++..+... .+ .++... +..+..+...-..+..
T Consensus 243 ~~~~~~v~~~~~g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~--~~--~~~~~~~~~~~~~i~g~~~~~~~ 317 (363)
T 3uog_A 243 EDWVERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGF--EV--SGPVGPLLLKSPVVQGISVGHRR 317 (363)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCSSC--EE--CCBTTHHHHTCCEEEECCCCCHH
T ss_pred ccHHHHHHHHhCCCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCCCc--cc--CcCHHHHHhCCcEEEEEecCCHH
Confidence 000 0 01238999999999 45566666667655543444333221 11 122111 1123344444334456
Q ss_pred hHHHHHHHHhhhcCeeEEEEEEEe
Q 019933 243 CLAPLAKVVHEEFGILEGLMTTVH 266 (334)
Q Consensus 243 cLAPvlKvL~d~fGI~~g~mTTVH 266 (334)
.+.-+++.+.+. .|+ -+++.+.
T Consensus 318 ~~~~~~~l~~~g-~l~-~~i~~~~ 339 (363)
T 3uog_A 318 ALEDLVGAVDRL-GLK-PVIDMRY 339 (363)
T ss_dssp HHHHHHHHHHHH-TCC-CCEEEEE
T ss_pred HHHHHHHHHHcC-CCc-cceeeEE
Confidence 677777777653 343 3444333
No 295
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=75.43 E-value=2.7 Score=38.30 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 5899999 8999999999999875 78887754
No 296
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=75.39 E-value=2.9 Score=38.97 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=26.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
|++||+|.|.|.+|..++..+...+.++ |.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 4569999999999999988888776457 555564
No 297
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=75.33 E-value=2.3 Score=41.90 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=29.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCC-CceEEEEeCCCCCHHHHhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~-d~eiVAIND~~~d~~~~ay 131 (334)
+||+|.|+|.+|..+...+.+.. .++|++++ .+.+.+..
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d---~~~~~~~~ 45 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD---VNESRINA 45 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC---SCHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE---CCHHHHHH
Confidence 59999999999999999888762 47877774 25554443
No 298
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=75.07 E-value=2.3 Score=42.31 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=31.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+.||||.|.|.+|..+.+.|.+.+ ++|+..|. +++....+.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~~r---~~~~~~~l~ 55 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG-YTVSIFNR---SREKTEEVI 55 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT-CCEEEECS---SHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC-CeEEEEeC---CHHHHHHHH
Confidence 569999999999999999998775 78777764 455554444
No 299
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=75.06 E-value=2.6 Score=41.83 Aligned_cols=41 Identities=22% Similarity=0.261 Sum_probs=30.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC-CceEEEEeCCCCCHHHHhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD-DVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~-d~eiVAIND~~~d~~~~ayL 132 (334)
++||+|.|.|.+|..+...+.+.. .++|++++ .+.+.+..|
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D---~~~~~v~~l 50 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD---MNTAKIAEW 50 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC---SCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE---CCHHHHHHH
Confidence 469999999999999988887763 57887774 355555444
No 300
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=74.89 E-value=2.7 Score=41.59 Aligned_cols=112 Identities=18% Similarity=0.151 Sum_probs=63.7
Q ss_pred CCceeEEEEc-CChhHHHHHHHHHcCCC-ceEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCCeEEECCEEEEE
Q 019933 87 DGNTKVGING-FGRIGRLVLRVAAFRDD-VDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDSTLEINGKLIKV 163 (334)
Q Consensus 87 ~M~ikVgING-fGrIGR~vlRal~~~~d-~eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~~L~inGk~I~V 163 (334)
.| .||.|.| +|.||...++.+...+| |+|+|+..-..+.+.++-..+ |.. .-+.+.++..... ..+++
T Consensus 20 ~m-k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q~~~f~p------~~v~v~d~~~~~~--~~~~v 90 (398)
T 2y1e_A 20 GR-LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQRAQTGV------TNIAVADEHAAQR--VGDIP 90 (398)
T ss_dssp CC-EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHHHHHHCC------CCEEESCHHHHHH--HCCCS
T ss_pred Cc-eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHHHHHcCC------CEEEEcCHHHhhh--cCCEE
Confidence 35 4899999 99999999999988764 999998651245555554432 211 1122211100000 01122
Q ss_pred EeccC-CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEe
Q 019933 164 FSKRD-PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 164 ~~~~d-P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIIS 209 (334)
+...+ ..++- ....+|+|+-+.-.+....-.-+.+++| |++.+.
T Consensus 91 ~~G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLA 135 (398)
T 2y1e_A 91 YHGSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTG-ARLALA 135 (398)
T ss_dssp EESTTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHT-CEEEEC
T ss_pred EecHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCC-CceEEc
Confidence 22111 00000 0125899999987777777766778888 565553
No 301
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=74.63 E-value=2.4 Score=42.53 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=32.3
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
-|..||||+|.|.+|..+.+.+.+.+ ++|+..|- +++.+..+.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~dr---~~~~~~~l~ 50 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHG-FTVCAYNR---TQSKVDHFL 50 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SSHHHHHHH
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 46679999999999999999998875 78777664 444444443
No 302
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=74.58 E-value=3.3 Score=37.76 Aligned_cols=30 Identities=33% Similarity=0.352 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|+|.|.+|..+...+...+ ++|+.++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G-~~V~~~d 45 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG-HTVVLVD 45 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999888775 7876654
No 303
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=74.48 E-value=3.2 Score=38.32 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=35.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhc
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFK 134 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlk 134 (334)
|||.|-| .|.||+.+++.|.+++.++++++.- ..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHhc
Confidence 3899999 9999999999999887568877753 147777777664
No 304
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=73.96 E-value=1.8 Score=37.83 Aligned_cols=30 Identities=23% Similarity=0.176 Sum_probs=24.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
..+|.|.|+|++|+.+++.|.+.+ . +++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g-~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE-V-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE-E-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhCC-e-EEEEE
Confidence 458999999999999999998765 5 66663
No 305
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=73.78 E-value=7.6 Score=36.65 Aligned_cols=30 Identities=37% Similarity=0.464 Sum_probs=23.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
|||+|.|.|.||..++..+..++-+ +|+-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~ 31 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMV 31 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 3999999999999999888776533 44433
No 306
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=73.65 E-value=4.2 Score=39.38 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=29.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHH
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYM 129 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ 129 (334)
.+|+|.|+|.||+.+.+.|.+.+ .+|+ +.|+ +++.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVv-v~D~--~~~~l 209 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLV-VTDV--NKAAV 209 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS--CHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEE-EEcC--CHHHH
Confidence 48999999999999999999885 7887 7774 55543
No 307
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=73.55 E-value=2.3 Score=37.84 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=27.4
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcC-CCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~-~d~eiVAIND 121 (334)
|.+||-|-| .|.||+.+++.|.++ +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 446899999 899999999999886 3477777653
No 308
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=73.37 E-value=3.4 Score=33.31 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=25.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
|++.|+|+|-|.-|-.+...|..++ ++++-+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G-~~V~v~ 31 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEE
Confidence 7889999999999999998888775 776555
No 309
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=73.31 E-value=4.3 Score=34.57 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=27.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~-d~eiVAIND 121 (334)
.+|-|-| .|.||+.+++.|.+++ ..+|+++..
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 5899999 9999999999999884 578877753
No 310
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=73.29 E-value=3.2 Score=37.58 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=27.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|.++|-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVID 33 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 556899999 9999999999999875 7777774
No 311
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=73.28 E-value=26 Score=32.39 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=27.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.||.|.|.|.+||.+++.|.+.+ .+|..+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 38999999999999999999887 777777763
No 312
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=73.28 E-value=2.9 Score=41.79 Aligned_cols=30 Identities=17% Similarity=0.232 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|.||+.+++.+...+ ++|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G-a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG-SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998775 7765543
No 313
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=73.24 E-value=3.8 Score=37.21 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=29.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.||+|.|.|.+|+.+.+.+...+ ++|+.. |. +.+.+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G-~~V~l~-d~--~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG-FAVTAY-DI--NTDALDAA 43 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS--SHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEE-eC--CHHHHHHH
Confidence 48999999999999999998875 776665 42 55544333
No 314
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=73.13 E-value=4.7 Score=37.03 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=53.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
-+|.|.| .|.||..+++++...+ .+++++.. +.+.+.++-+ +|. + ..++ .++
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~~----~ga---~--------~~~~--------~~~ 202 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS---TDEKLKIAKE----YGA---E--------YLIN--------ASK 202 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHH----TTC---S--------EEEE--------TTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHH----cCC---c--------EEEe--------CCC
Confidence 3799999 9999999999998875 68777753 4454444432 220 1 1111 011
Q ss_pred CC---CC-C-CCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 169 PA---EI-P-WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 169 P~---~i-~-W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
.+ .+ . .+..++|+||||+|. ...+.+-..++.|-+-|++
T Consensus 203 ~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 203 EDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp SCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEEC
T ss_pred chHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccCCEEEEE
Confidence 10 00 0 012379999999997 4555555666655533333
No 315
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=72.97 E-value=3.1 Score=37.91 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|+|-|.||...++++...+ .+++++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG-YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 37999999999999999988775 5888875
No 316
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=72.49 E-value=8.8 Score=35.72 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|+|.|.||..+++.+...+ .+|+++.
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~ 210 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG-AETYVIS 210 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 38999999999999999887765 5777765
No 317
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.43 E-value=3.6 Score=38.03 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=24.7
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
+|.|+|-|.||..+++++...+ . +|+++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG-AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 7999999999999999988775 6 777764
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=72.32 E-value=4.4 Score=38.16 Aligned_cols=93 Identities=26% Similarity=0.314 Sum_probs=50.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEE-ecc
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVF-SKR 167 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~-~~~ 167 (334)
-+|.|+|.|.||...++++...+ . +|+++ + .+.+...++-+ +|- + ..++-+.-.+. ..+
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~-~--~~~~~~~~a~~----lGa---~--------~vi~~~~~~~~~~i~ 244 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILS-T--RQATKRRLAEE----VGA---T--------ATVDPSAGDVVEAIA 244 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEE-C--SCHHHHHHHHH----HTC---S--------EEECTTSSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEE-C--CCHHHHHHHHH----cCC---C--------EEECCCCcCHHHHHH
Confidence 37999999999999999998775 5 66665 3 23444433332 221 0 11111000000 000
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
+. ..+...++|+||||+|.-.+.+.+-..++.|-
T Consensus 245 ~~--~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G 278 (370)
T 4ej6_A 245 GP--VGLVPGGVDVVIECAGVAETVKQSTRLAKAGG 278 (370)
T ss_dssp ST--TSSSTTCEEEEEECSCCHHHHHHHHHHEEEEE
T ss_pred hh--hhccCCCCCEEEECCCCHHHHHHHHHHhccCC
Confidence 10 01222289999999996545555555666554
No 319
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=72.21 E-value=8 Score=35.31 Aligned_cols=30 Identities=30% Similarity=0.378 Sum_probs=24.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+|.|.| .|.||..+++++...+ .+++++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 699999 5999999999988775 67777654
No 320
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=72.13 E-value=5.4 Score=35.62 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||.|-| .|.||+.+++.|.+++ .+++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 5899999 9999999999998875 6776653
No 321
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=72.04 E-value=2.9 Score=38.08 Aligned_cols=29 Identities=21% Similarity=0.121 Sum_probs=24.4
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
||+|.|.|.+|..+.+.|.+.+ .+|..++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~ 30 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRIWG 30 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 8999999999999999887764 6766665
No 322
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.87 E-value=3.2 Score=37.68 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 8999999999999885 77777643
No 323
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=71.50 E-value=3.1 Score=41.83 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=31.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||||+|+|.+|..+.+.+.+.+ ++|++.|- +++.+..+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~dr---~~~~~~~l~ 44 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR---TVSKVDDFL 44 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---STHHHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 59999999999999999998875 78777653 455554544
No 324
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=71.50 E-value=3.1 Score=41.22 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=29.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||+|+|+|.+|+.+.+.+.+.+ ++|...|- +.+.+..+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~dr---~~~~~~~l~ 42 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFNR---TVSKVDDFL 42 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---STHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHH
Confidence 48999999999999999998875 77666653 444444443
No 325
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=71.43 E-value=3.4 Score=38.39 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=24.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+||+|.|.|.||..+...|.+.+ .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 59999999999999999888764 5655554
No 326
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=71.28 E-value=1.7 Score=40.76 Aligned_cols=30 Identities=23% Similarity=0.480 Sum_probs=24.8
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+|.|.|.|.||...++++...+ .+++++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 7999999999999999887765 57776643
No 327
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=70.88 E-value=3.2 Score=41.19 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=29.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
|||||+|.|.+|+.+.+.+.+.+ ++|...|. +.+....+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~dr---~~~~~~~l~ 41 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFNR---TYSKSEEFM 41 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECS---SHHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 38999999999999999998875 77766653 455444443
No 328
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=70.81 E-value=15 Score=34.07 Aligned_cols=86 Identities=17% Similarity=0.120 Sum_probs=51.1
Q ss_pred eeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||.+.|.|.+|.. +.+.|.+++ .+| .+.|....+.....|-+ .| |.++...+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V-~~~D~~~~~~~~~~L~~----------------------~g--i~v~~g~~ 58 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEV-SGCDAKMYPPMSTQLEA----------------------LG--IDVYEGFD 58 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEE-EEEESSCCTTHHHHHHH----------------------TT--CEEEESCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEE-EEEcCCCCcHHHHHHHh----------------------CC--CEEECCCC
Confidence 48999999999995 788888876 664 44553211222212211 11 12222345
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
++++.. .++|+||=+.|.-.+........+.|.
T Consensus 59 ~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi 91 (326)
T 3eag_A 59 AAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGL 91 (326)
T ss_dssp GGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTC
T ss_pred HHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCC
Confidence 555431 258999999998776655555556665
No 329
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=70.65 E-value=4.1 Score=37.78 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=26.0
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCc------eEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDV------DVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~------eiVAIN 120 (334)
|++||.|.| .|.||+.+++.|.+++.+ +|+.+.
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 346999999 699999999998886533 676663
No 330
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=70.60 E-value=7.2 Score=37.44 Aligned_cols=96 Identities=22% Similarity=0.243 Sum_probs=55.7
Q ss_pred eeEEEEc-CChhHHHHHHH--HHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEE--EEEE
Q 019933 90 TKVGING-FGRIGRLVLRV--AAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKL--IKVF 164 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRa--l~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~--I~V~ 164 (334)
+||-|.| .|+.++.+++. +.+|++.++|+.-+|...- || .++.++.+. +.+|
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g------------~~-----------~~v~~G~~~~Gvpvy 67 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGD------------HK-----------QKFYWGHKEILIPVF 67 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCS------------EE-----------EEEEETTEEEEEEEE
T ss_pred CeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCC------------cc-----------ceEeccCccCCceee
Confidence 5999999 78888877776 4567789999988873110 10 112222222 3443
Q ss_pred eccCCCCCCCCcc-CccEEEeccCCCCCHHHHHHHHH-cCCCEEEE-eCC
Q 019933 165 SKRDPAEIPWGDY-GVDYVVESSGVFTTIAKASAHMK-GGAKKVVI-SAP 211 (334)
Q Consensus 165 ~~~dP~~i~W~~~-gvDiVvEsTG~f~t~e~a~~hl~-aGaKkVII-SaP 211 (334)
. +.++++ .+. ++|++|.+++.-...+.....++ +|+|-||+ |..
T Consensus 68 ~--sv~ea~-~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G 114 (334)
T 3mwd_B 68 K--NMADAM-RKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG 114 (334)
T ss_dssp S--SHHHHH-HHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSC
T ss_pred C--CHHHHh-hcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3 222211 011 57888888776544444444555 78887766 554
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=69.97 E-value=10 Score=36.07 Aligned_cols=40 Identities=18% Similarity=0.123 Sum_probs=29.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIND~~~d~~~~ayLl 133 (334)
-+|.|+|.|.||...++++...+ . +|+++.. +.+...++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~---~~~~~~~~~ 255 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSEP---SEVRRNLAK 255 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEECS---CHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHHH
Confidence 37999999999999999998775 5 6776632 344444443
No 332
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=69.94 E-value=4.5 Score=36.71 Aligned_cols=32 Identities=22% Similarity=0.205 Sum_probs=27.6
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+||-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 57 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDN 57 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 46999999 9999999999999875 78877754
No 333
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=69.85 E-value=4.7 Score=38.08 Aligned_cols=139 Identities=15% Similarity=0.215 Sum_probs=70.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCE---EEEEEecc
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGK---LIKVFSKR 167 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk---~I~V~~~~ 167 (334)
+|.|+|.|.||...++++...+-.+|+++.. +.+.+.++.+ +|- + ..++-+ .-.+ . .
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~----lGa---~--------~vi~~~~~~~~~~-~-~ 257 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEE----IGA---D--------LTLNRRETSVEER-R-K 257 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHH----TTC---S--------EEEETTTSCHHHH-H-H
T ss_pred EEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHH----cCC---c--------EEEeccccCcchH-H-H
Confidence 7999999999999999988775247777652 3444444433 221 0 011100 0000 0 0
Q ss_pred CCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCcc--ccCCCCCEEecCCchhhhHH
Q 019933 168 DPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEK--TYKPNMNIVSNASCTTNCLA 245 (334)
Q Consensus 168 dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~--~y~~~~~IVSnASCTTncLA 245 (334)
...++. +..++|+||||+|.-...+.+-..++.|-+-|++..++...+. .++.. .+..+..++..-..+...+.
T Consensus 258 ~v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~ 333 (380)
T 1vj0_A 258 AIMDIT-HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFV 333 (380)
T ss_dssp HHHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHHHHH
T ss_pred HHHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHHHHH
Confidence 000000 1237999999999765566666666655433333333211121 22222 23333455544333455666
Q ss_pred HHHHHHhh
Q 019933 246 PLAKVVHE 253 (334)
Q Consensus 246 PvlKvL~d 253 (334)
-+++.+.+
T Consensus 334 ~~~~l~~~ 341 (380)
T 1vj0_A 334 KTVSITSR 341 (380)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 67777765
No 334
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=69.44 E-value=4.5 Score=36.49 Aligned_cols=31 Identities=16% Similarity=0.304 Sum_probs=25.7
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEE
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAI 119 (334)
|..+|-|-| .|.||+.+++.|.+++ .+|+++
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~ 39 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG-YAVNTT 39 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEE
Confidence 445899999 9999999999999875 777764
No 335
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=69.32 E-value=2.7 Score=42.49 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=54.8
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCc---eEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDV---DVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~---eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
+.||.|.|+|-||+.+++.+.+++++ +|+.+ |+..... -+.+ - + |.++...+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~---~~~~--~----------------~---g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKV---DVAQ--Q----------------Y---GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSC---CHHH--H----------------H---TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhh---hHHh--h----------------c---CCceeEEe
Confidence 45999999999999999999988766 45544 4311110 1110 0 0 10111101
Q ss_pred c--cC----CC-CCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeC
Q 019933 166 K--RD----PA-EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISA 210 (334)
Q Consensus 166 ~--~d----P~-~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISa 210 (334)
- .| .+ -+ ++ + |+||.++--+.+...+++-+++|+ -.|+.
T Consensus 68 Vdadnv~~~l~aLl--~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDT 113 (480)
T 2ph5_A 68 ITPQNYLEVIGSTL--EE-N-DFLIDVSIGISSLALIILCNQKGA--LYINA 113 (480)
T ss_dssp CCTTTHHHHTGGGC--CT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEES
T ss_pred ccchhHHHHHHHHh--cC-C-CEEEECCccccCHHHHHHHHHcCC--CEEEC
Confidence 0 10 11 12 22 3 999999888888899999999999 44543
No 336
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=68.60 E-value=14 Score=34.27 Aligned_cols=28 Identities=29% Similarity=0.274 Sum_probs=23.5
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCce-EEEE
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVD-VVAV 119 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~e-iVAI 119 (334)
+|.|+|-|.||...++++...+ .+ |+++
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~ 210 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG-ACPLVIT 210 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEE
Confidence 7999999999999999998775 55 6665
No 337
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.58 E-value=4.6 Score=38.68 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|+||+.+++.+...+ .+|++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d 198 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLD 198 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 48999999999999999998876 6776665
No 338
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.49 E-value=4.7 Score=38.06 Aligned_cols=30 Identities=23% Similarity=0.434 Sum_probs=27.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|.|.+|+.+++++.+.+ +++++++
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G-~~vi~~d 44 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG-YKIAVLD 44 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 48999999999999999998875 8988886
No 339
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=68.48 E-value=5.5 Score=35.86 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=26.4
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.++|-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 36 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIAD 36 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence 45899999 9999999999999885 7777764
No 340
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=68.35 E-value=4.8 Score=37.08 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=27.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|+.+|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG-YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEEC
Confidence 545899999 9999999999999875 78877754
No 341
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=68.26 E-value=4.7 Score=37.38 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=28.4
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEeCCCCCHHHHhhh
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~-eiVAIND~~~d~~~~ayL 132 (334)
+|.|+|-|.||..+++++...+ . +|+++.. +.+.+.++
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~---~~~~~~~~ 208 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG-AYPVIVSEP---SDFRRELA 208 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCSEEEECS---CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEECC---CHHHHHHH
Confidence 7999999999999999998775 6 7776642 34444443
No 342
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=68.14 E-value=4.4 Score=39.34 Aligned_cols=38 Identities=18% Similarity=0.460 Sum_probs=29.3
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
||+|.|.|.+|..+...+.+.+ .+|+.++ .+.+.+..+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G-~~V~~~d---~~~~~~~~l 39 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG-HEVIGVD---VSSTKIDLI 39 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEC---SCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CEEEEEE---CCHHHHHHH
Confidence 8999999999999999888875 7876663 355555444
No 343
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=67.84 E-value=6.8 Score=37.98 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=29.7
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
-+|.|.|- |.||...++++...+ .+++++-. +.+.+.++-
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~---~~~~~~~~~ 270 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGG-ANPICVVS---SPQKAEICR 270 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CeEEEEEC---CHHHHHHHH
Confidence 37999995 999999999998775 67777653 445555543
No 344
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=67.82 E-value=3.7 Score=36.47 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|.|.| +|.||+.+++.|.+++ .+|+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 4899999 9999999999998875 67777653
No 345
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=67.70 E-value=5.3 Score=37.02 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 4899999 9999999999999874378877743
No 346
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=67.68 E-value=4.5 Score=40.83 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|.||+.+++.+...+ .+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998775 6766654
No 347
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=67.54 E-value=4.7 Score=36.10 Aligned_cols=29 Identities=24% Similarity=0.162 Sum_probs=24.5
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
||+|.|.|.+|+.+++.+.+.+ ++|...|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~ 146 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVWVWN 146 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 8999999999999999998876 5665555
No 348
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=67.07 E-value=4.8 Score=36.79 Aligned_cols=32 Identities=19% Similarity=0.354 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++..+|+++..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 79 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDN 79 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 5899999 8999999999999875467777754
No 349
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=66.96 E-value=4.5 Score=36.37 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=26.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~-d~eiVAIND 121 (334)
+||-|-| .|.||+.+++.|.+++ +.+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 4899999 9999999999998874 478887753
No 350
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=66.92 E-value=2.4 Score=37.22 Aligned_cols=33 Identities=12% Similarity=0.071 Sum_probs=26.9
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|+.+|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 446899999 8999999999998875 77766643
No 351
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=66.86 E-value=4.1 Score=39.35 Aligned_cols=31 Identities=29% Similarity=0.399 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIND 121 (334)
.+|+|.|+|.||+.+++.+...+ + +|+++|-
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 38999999999999999998765 6 6777764
No 352
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=66.50 E-value=4.3 Score=37.39 Aligned_cols=132 Identities=18% Similarity=0.190 Sum_probs=68.9
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCCC
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDPA 170 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP~ 170 (334)
+|.|+|.|.||...++++...+ .+|+++.. +.+.+.++-+ +|. + ..++ .++.+
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa---~--------~~i~--------~~~~~ 221 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLARR----LGA---E--------VAVN--------ARDTD 221 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHH----TTC---S--------EEEE--------TTTSC
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHH----cCC---C--------EEEe--------CCCcC
Confidence 7999999999999999998876 68887743 4454444433 220 0 1111 11110
Q ss_pred ---CCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccccCCCCCEEecCCchhhhHHHH
Q 019933 171 ---EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKTYKPNMNIVSNASCTTNCLAPL 247 (334)
Q Consensus 171 ---~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~y~~~~~IVSnASCTTncLAPv 247 (334)
.+.-...++|+|||++|.-...+.+-..++.|-+-|++..+..+ +-...+ ..+..+..+......+...+.-+
T Consensus 222 ~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~---~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~ 297 (340)
T 3s2e_A 222 PAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD---FGTPIF-DVVLKGITIRGSIVGTRSDLQES 297 (340)
T ss_dssp HHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSE---EEEEHH-HHHHTTCEEEECCSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCC---CCCCHH-HHHhCCeEEEEEecCCHHHHHHH
Confidence 00000117899999999655556666666655432333222211 111111 11112344554444455566666
Q ss_pred HHHHhh
Q 019933 248 AKVVHE 253 (334)
Q Consensus 248 lKvL~d 253 (334)
++.+.+
T Consensus 298 ~~l~~~ 303 (340)
T 3s2e_A 298 LDFAAH 303 (340)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 666654
No 353
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=66.50 E-value=5.6 Score=36.27 Aligned_cols=30 Identities=30% Similarity=0.376 Sum_probs=23.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
+||+|.|.|.+|..+...|...+.+ +|+.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 5999999999999999888776522 65544
No 354
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=66.34 E-value=7.3 Score=36.18 Aligned_cols=31 Identities=26% Similarity=0.223 Sum_probs=26.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 5899999 8999999999999875 78877754
No 355
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=66.13 E-value=5.2 Score=37.65 Aligned_cols=40 Identities=25% Similarity=0.216 Sum_probs=30.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
.||+|+|.|.+|..+...+...+ ++|+.. | .+++.+..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G-~~V~l~-d--~~~~~~~~~~ 46 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVKLY-D--IEPRQITGAL 46 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEE-C--SCHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC-CEEEEE-e--CCHHHHHHHH
Confidence 48999999999999999988875 776665 4 3666555543
No 356
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=65.94 E-value=17 Score=33.65 Aligned_cols=30 Identities=30% Similarity=0.239 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|+|.|.||..+++++...+ .+|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYG-AFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEc
Confidence 37999999999999999988775 6666653
No 357
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=65.93 E-value=8.8 Score=33.78 Aligned_cols=30 Identities=27% Similarity=0.496 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||-|-| +|.||+.+++.|.+++ .+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN-VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS-EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC-CeEEecc
Confidence 4999999 9999999999999875 8888774
No 358
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=65.07 E-value=6.7 Score=35.20 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=26.6
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+++..+|+++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 899999 8999999999999874578887754
No 359
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=65.02 E-value=3.8 Score=38.65 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=20.3
Q ss_pred CceeEEEEcCChhHHHHHHHHHcC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFR 111 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~ 111 (334)
|++||+|.|.|.+|..+.+.|.+.
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 346999999999999998888654
No 360
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=65.00 E-value=8.6 Score=36.33 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|-|.+|+.+++++.+.+ ++++++.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG-~~viv~d 42 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMG-YKVVVLD 42 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 58999999999999999998875 8888884
No 361
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=64.95 E-value=15 Score=34.13 Aligned_cols=29 Identities=38% Similarity=0.433 Sum_probs=24.5
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
+|.|+|.|.||...++++...+ . +|+++.
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 203 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG-AAQVVVTD 203 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 7999999999999999988775 5 677764
No 362
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=64.84 E-value=4.3 Score=37.24 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=29.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
-+|.|.| .|.||..+++.+...+ .+++++.. +.+.+.++.
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~---~~~~~~~~~ 182 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVS---SPEKAAHAK 182 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES---SHHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHH
Confidence 3799999 9999999999988775 68777643 444444443
No 363
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=64.72 E-value=12 Score=34.87 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|+|.|.||..+++++...+ . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999988775 5 676664
No 364
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=64.61 E-value=5.7 Score=37.04 Aligned_cols=32 Identities=31% Similarity=0.370 Sum_probs=26.7
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.++|.|-| +|.||+.+++.|.+++ .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 35899999 9999999999998875 78777653
No 365
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=64.47 E-value=8 Score=36.13 Aligned_cols=30 Identities=13% Similarity=0.289 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|.|.|.||..+++++...+ . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 38999999999999999887665 5 666663
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=64.19 E-value=6.3 Score=36.70 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHH-HHHH-HcCCCce-EEEEeC
Q 019933 90 TKVGINGFGRIGRLV-LRVA-AFRDDVD-VVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~v-lRal-~~~~d~e-iVAIND 121 (334)
-+|.|+|-|.||... ++++ ...+ .+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeC
Confidence 489999999999999 9988 6664 55 777754
No 367
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=63.95 E-value=9.7 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.316 Sum_probs=25.1
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+|.|+| .|.||...++++...+ .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 489999 5999999999998876 68888753
No 368
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=63.78 E-value=9.6 Score=35.63 Aligned_cols=29 Identities=14% Similarity=0.344 Sum_probs=24.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
-+|.|+|.|.||...++++...+ . +|+++
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~ 226 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAG-ASRIIAI 226 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEE
Confidence 37999999999999999988775 5 67666
No 369
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=63.68 E-value=6.2 Score=38.29 Aligned_cols=30 Identities=27% Similarity=0.190 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|+|+|.||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D 202 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVRAFD 202 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 58999999999999999998776 6665554
No 370
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=63.45 E-value=6.8 Score=35.15 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=27.0
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+||-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 46 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVA 46 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeC
Confidence 35999999 9999999999999875 78887754
No 371
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=63.43 E-value=19 Score=32.47 Aligned_cols=30 Identities=17% Similarity=0.118 Sum_probs=23.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|-|+|.|.+|...++.|.+.+ -+|+.|.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998875 4444443
No 372
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=62.85 E-value=1.8 Score=40.73 Aligned_cols=30 Identities=23% Similarity=0.432 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|.|-|.||...++++...+ . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887765 5 677763
No 373
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=62.61 E-value=7.2 Score=34.90 Aligned_cols=31 Identities=26% Similarity=0.366 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 4899999 9999999999999875 78877753
No 374
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=62.45 E-value=8.6 Score=35.90 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|+|.|.||..+++++...+ . +|+++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999999999887664 5 566664
No 375
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=62.09 E-value=7 Score=37.36 Aligned_cols=30 Identities=23% Similarity=0.240 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|+|+||+.+++.+...+ .+|++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d 202 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVVMATD 202 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998776 6755554
No 376
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=61.90 E-value=7.7 Score=34.42 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=25.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 899999 8999999999999875 78777743
No 377
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=61.68 E-value=9.3 Score=35.41 Aligned_cols=41 Identities=10% Similarity=-0.026 Sum_probs=28.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.+|+|.|+|.+|+.+++.+.+...++-|.|-|. +.+....+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr--~~~~~~~l 176 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR--TKENAEKF 176 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS--SHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHHHHH
Confidence 489999999999999998876423644556553 55544333
No 378
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=61.28 E-value=6.8 Score=36.30 Aligned_cols=90 Identities=18% Similarity=0.166 Sum_probs=51.2
Q ss_pred eeEEEE-cCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGIN-GFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgIN-GfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
-+|.|+ |.|.||..+++++...+ .+|+++.. +.+.+.++.+ +|. + ..++.+. .+ . ..
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~----lGa---~--------~vi~~~~-~~-~-~~ 209 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTKK----MGA---D--------IVLNHKE-SL-L-NQ 209 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHHH----HTC---S--------EEECTTS-CH-H-HH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHHh----cCC---c--------EEEECCc-cH-H-HH
Confidence 379999 59999999999998776 68877743 4555555443 221 1 1111100 00 0 00
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
..++ ...++|+||||+|.-...+.+-..++.|-
T Consensus 210 ~~~~--~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G 242 (346)
T 3fbg_A 210 FKTQ--GIELVDYVFCTFNTDMYYDDMIQLVKPRG 242 (346)
T ss_dssp HHHH--TCCCEEEEEESSCHHHHHHHHHHHEEEEE
T ss_pred HHHh--CCCCccEEEECCCchHHHHHHHHHhccCC
Confidence 0111 12379999999996444444545555544
No 379
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=61.17 E-value=7.9 Score=34.72 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~ 32 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG-IDLIVFD 32 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC-CEEEEEe
Confidence 4899999 9999999999999875 7888774
No 380
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=61.08 E-value=11 Score=35.26 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|+|.|.||...++++...+ . +|+++.
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 224 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSAG-AKRIIAVD 224 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEc
Confidence 37999999999999999988775 5 676663
No 381
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=61.01 E-value=4.4 Score=37.42 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=20.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFR 111 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~ 111 (334)
++||+|.|.|.+|..+.+.+.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 36999999999999999888765
No 382
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=60.32 E-value=8.3 Score=36.01 Aligned_cols=74 Identities=20% Similarity=0.134 Sum_probs=47.7
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
.||||.|.|.+|..+.+.+. .+ ++|+..|- +++.+..+.++ + . + ..+ + .++.. .++
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG-~~V~v~d~---~~~~~~~~~~~------l-----~-~-~~~--~--~i~~~--~~~ 68 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SK-HEVVLQDV---SEKALEAAREQ------I-----P-E-ELL--S--KIEFT--TTL 68 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TT-SEEEEECS---CHHHHHHHHHH------S-----C-G-GGG--G--GEEEE--SSC
T ss_pred CeEEEEeeCHHHHHHHHHHH-cC-CEEEEEEC---CHHHHHHHHHH------H-----H-H-HHh--C--CeEEe--CCH
Confidence 49999999999999999998 64 88777753 56666665543 1 0 0 000 0 12221 344
Q ss_pred CCCCCCccCccEEEeccCCCCC
Q 019933 170 AEIPWGDYGVDYVVESSGVFTT 191 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t 191 (334)
+.+ .++|+||||...-..
T Consensus 69 ~~~----~~aDlVieavpe~~~ 86 (293)
T 1zej_A 69 EKV----KDCDIVMEAVFEDLN 86 (293)
T ss_dssp TTG----GGCSEEEECCCSCHH
T ss_pred HHH----cCCCEEEEcCcCCHH
Confidence 432 389999999986543
No 383
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=60.27 E-value=2.3 Score=39.09 Aligned_cols=89 Identities=25% Similarity=0.252 Sum_probs=49.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
-+|.|.|.|.+|...++++....--.++++ + .+.+.+.++-++ |- + ..+|- .+.+.
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~-~--~~~~k~~~a~~l----Ga---~--------~~i~~------~~~~~ 217 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGAKSVTAI-D--ISSEKLALAKSF----GA---M--------QTFNS------SEMSA 217 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEE-E--SCHHHHHHHHHT----TC---S--------EEEET------TTSCH
T ss_pred CEEEEECCCCcchHHHHHHHHcCCcEEEEE-e--chHHHHHHHHHc----CC---e--------EEEeC------CCCCH
Confidence 379999999999999998887753333444 3 244444444332 21 0 01110 00000
Q ss_pred C----CCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 170 A----EIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 170 ~----~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
. .+. +..++|+|+||+|.-.+.+.+-..++.|-
T Consensus 218 ~~~~~~~~-~~~g~d~v~d~~G~~~~~~~~~~~l~~~G 254 (346)
T 4a2c_A 218 PQMQSVLR-ELRFNQLILETAGVPQTVELAVEIAGPHA 254 (346)
T ss_dssp HHHHHHHG-GGCSSEEEEECSCSHHHHHHHHHHCCTTC
T ss_pred HHHHHhhc-ccCCcccccccccccchhhhhhheecCCe
Confidence 0 000 12378999999997655566555555554
No 384
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=60.11 E-value=10 Score=35.27 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
-+|.|+|.|.||..+++++...+ . +|+++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 37999999999999999887765 5 676663
No 385
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=60.11 E-value=5.1 Score=37.47 Aligned_cols=31 Identities=29% Similarity=0.275 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
-+|.|+|-|.||..+++.+...+ .+|+++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG-LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 38999999999999999988775 58777753
No 386
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=60.09 E-value=8.2 Score=34.76 Aligned_cols=32 Identities=9% Similarity=0.071 Sum_probs=26.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||+|.|-| .|+.+++++.+.+ ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G-~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG-FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT-CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC-CEEEEEEC
Confidence 56799999998 9999999998875 88877753
No 387
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=59.84 E-value=11 Score=34.67 Aligned_cols=30 Identities=33% Similarity=0.524 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|.|-|.||..+++++...+ .+|+++.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~ 195 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 195 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 38999999999999999998876 6877764
No 388
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=59.70 E-value=11 Score=34.19 Aligned_cols=31 Identities=13% Similarity=0.318 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999999875 78777654
No 389
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=59.54 E-value=6.7 Score=39.75 Aligned_cols=111 Identities=16% Similarity=0.136 Sum_probs=62.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHc---C-CCceEEEEeCCCCCHHHHhhhhc-cccccccCCCeEEEeCCC-------eEEE
Q 019933 90 TKVGING-FGRIGRLVLRVAAF---R-DDVDVVAVNDPFIDAKYMAYMFK-YDSTHGVFKGTINVVDDS-------TLEI 156 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~---~-~d~eiVAIND~~~d~~~~ayLlk-YDSthGkf~~~v~~e~~~-------~L~i 156 (334)
.||.|.| +|.||...|+.+.+ . ++|+|+|+.. ..+.+.++-..+ |.. .-+.+.++. .|.-
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaA-g~Nv~lL~eQ~~ef~P------~~v~v~d~~~~~~L~~~l~~ 150 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV-NKSVNELYEQAREFLP------EYLCIHDKSVYEELKELVKN 150 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEE-SSCHHHHHHHHHHHCC------SEEEESCGGGTHHHHTGGGG
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEc-CCCHHHHHHHHHHcCC------CEEEEcCHHHHHHHHHHhhh
Confidence 5899999 99999999999987 3 3599999876 356665554432 211 112221110 0100
Q ss_pred -CCEEEEEEeccC-CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEe
Q 019933 157 -NGKLIKVFSKRD-PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVIS 209 (334)
Q Consensus 157 -nGk~I~V~~~~d-P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIIS 209 (334)
.|..++++...+ ..++- ....+|+|+-+.-.+....-.-+.+++| |++.+.
T Consensus 151 ~~~~~~~v~~G~egl~e~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~IALA 203 (488)
T 3au8_A 151 IKDYKPIILCGDEGMKEIC-SSNSIDKIVIGIDSFQGLYSTMYAIMNN-KIVALA 203 (488)
T ss_dssp STTCCCEEEEHHHHHHHHH-HCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEC
T ss_pred hcCCCceEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CcEEEe
Confidence 122234433221 11110 0125899998876666666555677888 565553
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=59.53 E-value=8.6 Score=36.46 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|+|.|.|.||+.+++.+...+ .+|++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d 196 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILD 196 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 48999999999999999998876 6776664
No 391
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=58.96 E-value=8.8 Score=38.00 Aligned_cols=39 Identities=26% Similarity=0.272 Sum_probs=29.9
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
+||+|.|.|.+|..+...+.+ .++|++++ .+.+.+..|-
T Consensus 37 mkIaVIGlG~mG~~lA~~La~--G~~V~~~D---~~~~~v~~l~ 75 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ--NHEVVALD---IVQAKVDMLN 75 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TSEEEEEC---SCHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc--CCeEEEEe---cCHHHhhHHh
Confidence 699999999999999887765 48887774 3666555443
No 392
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=58.59 E-value=8.8 Score=35.47 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++||+|.|.|.+|..+...+...+-.+| .+-|
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V-~l~D 35 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADV-VLFD 35 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEE-EEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceE-EEEe
Confidence 3699999999999999998887652264 3444
No 393
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=58.46 E-value=7.5 Score=35.24 Aligned_cols=31 Identities=19% Similarity=0.178 Sum_probs=25.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.||+|.|.|.+|+.+++.|.+.+ ++|...|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEEC
Confidence 48999999999999999998775 56655553
No 394
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=58.36 E-value=10 Score=34.41 Aligned_cols=31 Identities=32% Similarity=0.468 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 9999999999999875 78877743
No 395
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=58.23 E-value=7 Score=36.67 Aligned_cols=32 Identities=22% Similarity=0.156 Sum_probs=24.2
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCC-ceEEEE
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDD-VDVVAV 119 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d-~eiVAI 119 (334)
+++||+|.| .|.||..++..|.+++. -+|+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 346999999 99999999998877642 345554
No 396
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=57.92 E-value=7.2 Score=38.17 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|+|+|+||+.+++.+...+ .+|++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D 214 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTTGYD 214 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEEe
Confidence 49999999999999999988765 6655543
No 397
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=57.88 E-value=11 Score=35.26 Aligned_cols=85 Identities=21% Similarity=0.153 Sum_probs=53.0
Q ss_pred eEEEE-cC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 91 KVGIN-GF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 91 kVgIN-Gf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+++|+ |+ |+.|+.+++.+.+.+ +++|...+|.. .| -.+.| +.++. +
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~G-~~~v~~VnP~~--------------~g-------------~~i~G--~~vy~--s 62 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEYG-TNLVGGTTPGK--------------GG-------------KTHLG--LPVFN--T 62 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECTTC--------------TT-------------CEETT--EEEES--S
T ss_pred cEEEEECCCCCHHHHHHHHHHHCC-CcEEEEeCCCc--------------Cc-------------ceECC--eeeec--h
Confidence 57888 95 999999999888764 77664333410 00 01233 23332 1
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
.++++ .+.++|+++-+++.....+.+...++.|+|.+|+
T Consensus 63 l~el~-~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 63 VKEAK-EQTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp HHHHH-HHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhh-hcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22222 1126899999988777777777778899988544
No 398
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=57.74 E-value=12 Score=35.00 Aligned_cols=31 Identities=10% Similarity=0.038 Sum_probs=25.4
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND 121 (334)
-+|.|+|- |.||..+++++...+ .+++++..
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~~ 197 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG-YIPIATCS 197 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 37999995 999999999998875 68877743
No 399
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=57.69 E-value=8 Score=35.07 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=26.1
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+++..+|+++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 799999 9999999999998864578877753
No 400
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=57.41 E-value=7.7 Score=33.89 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=21.5
Q ss_pred ceeEEEEc-CChhHHHHHHHHHcCC
Q 019933 89 NTKVGING-FGRIGRLVLRVAAFRD 112 (334)
Q Consensus 89 ~ikVgING-fGrIGR~vlRal~~~~ 112 (334)
++||.|-| .|.||+.+++.|.+++
T Consensus 6 ~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 6 SMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHhcC
Confidence 36999999 9999999999999875
No 401
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=57.01 E-value=11 Score=33.38 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=27.4
Q ss_pred CceeEEEEcCCh---------hHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGR---------IGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGr---------IGR~vlRal~~~~d~eiVAIND 121 (334)
|++||+|.|-|. -|+.+++++.+.+ ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G-~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG-IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC-CeEEEEec
Confidence 567999999887 7899999998875 88877753
No 402
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=56.76 E-value=9.4 Score=36.48 Aligned_cols=87 Identities=20% Similarity=0.138 Sum_probs=52.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
.||+|.|.|.+|+.+++.|.+. .+|+.. | .+.+....+.+ . + ..+.+ ...|.
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~--~~V~V~-~--R~~~~a~~la~--~----~----------------~~~~~-d~~~~ 68 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE--FDVYIG-D--VNNENLEKVKE--F----A----------------TPLKV-DASNF 68 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--SEEEEE-E--SCHHHHHHHTT--T----S----------------EEEEC-CTTCH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC--CeEEEE-E--CCHHHHHHHHh--h----C----------------CeEEE-ecCCH
Confidence 5999999999999999999876 665444 4 25555444331 0 0 00110 00111
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCC
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAK 204 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaK 204 (334)
+++.=--.++|+||.|++.....+-+...+++|+.
T Consensus 69 ~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~ 103 (365)
T 2z2v_A 69 DKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD 103 (365)
T ss_dssp HHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCe
Confidence 11000002689999999877666677778888884
No 403
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=56.50 E-value=10 Score=36.10 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=28.6
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
++||+|.|.|.+|..+...|.+.+ .+|...+ .+++.+..+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~---r~~~~~~~i 68 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLWS---YESDHVDEM 68 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEEC---SCHHHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEEe---CCHHHHHHH
Confidence 459999999999999999988764 5654443 245544443
No 404
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=55.97 E-value=8.9 Score=34.58 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCC-CceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRD-DVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~-d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ ..+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 4899999 9999999999998863 478877753
No 405
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=55.82 E-value=12 Score=35.03 Aligned_cols=35 Identities=29% Similarity=0.262 Sum_probs=26.3
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
+|++||+|.|.|.+|..+...+...+-++ |.+-|.
T Consensus 12 ~~~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 12 IMRKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 35569999999999999988888775337 555563
No 406
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=55.75 E-value=12 Score=33.37 Aligned_cols=30 Identities=23% Similarity=0.427 Sum_probs=25.5
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 32 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARG-LEVAVLDN 32 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 799999 9999999999999875 78777643
No 407
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=55.65 E-value=9.4 Score=36.75 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=28.1
Q ss_pred eEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 91 KVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
||+|.|.|.+|..+...+.+ + .+|++++ .+.+.+..+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G-~~V~~~d---~~~~~~~~l 38 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q-NEVTIVD---ILPSKVDKI 38 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T-SEEEEEC---SCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHhC-C-CEEEEEE---CCHHHHHHH
Confidence 89999999999999888876 4 7877774 255544443
No 408
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=55.57 E-value=10 Score=37.56 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=30.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
|||+|.|.|.+|..+...+.+.+ .+|+.++ .+.+.+..|-
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d---~~~~~v~~l~ 48 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIG-HDVFCLD---VDQAKIDILN 48 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC---SCHHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHhCC-CEEEEEE---CCHHHHHHHH
Confidence 49999999999999988888765 7877774 3556555544
No 409
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=55.24 E-value=9.1 Score=38.03 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|.|.|+|++|+.+++.|.+.+ .+++.|-
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid 378 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP-VPFILID 378 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCC-CCEEEEE
Confidence 48999999999999999998874 7877774
No 410
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=55.21 E-value=9.2 Score=38.13 Aligned_cols=40 Identities=25% Similarity=0.325 Sum_probs=30.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
.||+|+|.|.+|..+.+.+...+ ++|+..+ .+.+.+..+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG-~~V~l~D---~~~e~l~~~~ 45 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG-HQVLLYD---ISAEALTRAI 45 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEC---SCHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCC-CeEEEEE---CCHHHHHHHH
Confidence 48999999999999999988875 7876654 3566555543
No 411
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=54.86 E-value=17 Score=34.57 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=27.7
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|++||.|.|-|.+|+.+++++.+.+ ++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G-~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLG-VEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 3459999999999999999998764 88888864
No 412
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=54.34 E-value=14 Score=33.61 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|+| .|.||...++++...+ .+++++.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~ 184 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKG-TTVITTA 184 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEe
Confidence 3799998 9999999999998775 6887774
No 413
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=54.33 E-value=11 Score=36.99 Aligned_cols=31 Identities=23% Similarity=0.307 Sum_probs=26.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG-HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 4999999 9999999999999885 78877754
No 414
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=54.24 E-value=10 Score=35.50 Aligned_cols=32 Identities=34% Similarity=0.485 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
|||+|.|.|.||..+.-.|..++-+.=+.+=|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~D 32 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 49999999999998888777665443333434
No 415
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=54.14 E-value=18 Score=36.13 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|+|.|.+|..+...+...+ ++|+..+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG-~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG-IETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 48999999999999999988875 8876664
No 416
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=54.11 E-value=12 Score=33.93 Aligned_cols=31 Identities=29% Similarity=0.287 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4899999 8999999999999875 78777753
No 417
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=53.98 E-value=17 Score=34.91 Aligned_cols=40 Identities=25% Similarity=0.116 Sum_probs=29.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhh
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMF 133 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLl 133 (334)
-+|.|.| .|-||..+++++...+ .+++++-. +.+.+.++.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~---~~~~~~~~~ 262 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVS---SAQKEAAVR 262 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHH
Confidence 4799999 5999999999998775 67776643 445554443
No 418
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=53.76 E-value=13 Score=33.19 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 8999999999999875 78877743
No 419
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=53.60 E-value=12 Score=32.83 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=25.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+++..+|+++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r 32 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc
Confidence 578999 8999999999999875467777754
No 420
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=53.54 E-value=10 Score=33.44 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=24.5
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
||.|-| .|.||+.+++.|. + ..+|+++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~ 30 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALD 30 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEEC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEec
Confidence 899999 8999999999998 6 48888774
No 421
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=53.42 E-value=28 Score=31.92 Aligned_cols=132 Identities=16% Similarity=0.223 Sum_probs=67.1
Q ss_pred eeEEEEcC-ChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGF-GRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGf-GrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
-+|.|.|- |.||+.+++.+...+ .+++++.. +.+.+..+-+ +|. +. .+ ..++
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~---~~~~~~~~~~----~ga---~~--------~~--------d~~~ 220 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG---SEDKLRRAKA----LGA---DE--------TV--------NYTH 220 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES---SHHHHHHHHH----HTC---SE--------EE--------ETTS
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC---CHHHHHHHHh----cCC---CE--------EE--------cCCc
Confidence 47999995 999999999998875 57777642 3444444322 221 00 01 0011
Q ss_pred CC---CCC--CCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEEeCCCCCCCeEEeecCccc-cCCCCCEEecCCchhh
Q 019933 169 PA---EIP--WGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSADAPMFVVGVNEKT-YKPNMNIVSNASCTTN 242 (334)
Q Consensus 169 P~---~i~--W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVIISaPs~D~p~~V~GVN~~~-y~~~~~IVSnASCTTn 242 (334)
++ .+. .+..++|+|||++| -...+.+-..++.|-+-|++..++.+.+ .++... +..+..++..-..+..
T Consensus 221 ~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~ 295 (343)
T 2eih_A 221 PDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEG----TLPFAHVFYRQLSILGSTMASKS 295 (343)
T ss_dssp TTHHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCC----CCCTTHHHHTTCEEEECCSCCGG
T ss_pred ccHHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcC----ccCHHHHHhCCcEEEEecCccHH
Confidence 10 000 01137999999999 5566666666665443333333322111 122111 1122344433223345
Q ss_pred hHHHHHHHHhh
Q 019933 243 CLAPLAKVVHE 253 (334)
Q Consensus 243 cLAPvlKvL~d 253 (334)
.+.-+++.+.+
T Consensus 296 ~~~~~~~l~~~ 306 (343)
T 2eih_A 296 RLFPILRFVEE 306 (343)
T ss_dssp GHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 56666666665
No 422
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=53.28 E-value=13 Score=34.35 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=24.3
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
++||+|.|.|.+|..+...|.+.+ .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 359999999999999999888764 566555
No 423
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=53.20 E-value=5.3 Score=40.04 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
+||+|.|.|.+|..+...+.+.+.+ +|+.++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 5999999999999999988887237 877765
No 424
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=53.18 E-value=12 Score=36.91 Aligned_cols=31 Identities=23% Similarity=0.168 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.||+|+|+|+||+.+++.+...+ .+|+ +-|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVS-ATDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 59999999999999999998775 5654 4453
No 425
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=53.07 E-value=10 Score=36.40 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=28.5
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+|+.||.|.|-|.+|+.++|++.+.+ +++++|.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~G-~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEMG-KKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHcC-CEEEEEE
Confidence 44569999999999999999999885 9988884
No 426
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=52.94 E-value=7.5 Score=35.52 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=24.5
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
+|.|+| .|.||...++.+...+ .+++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 699999 5999999999887765 67777654
No 427
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=52.70 E-value=21 Score=31.77 Aligned_cols=31 Identities=16% Similarity=0.105 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 4899999 8999999999999875 78777654
No 428
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=52.13 E-value=15 Score=33.49 Aligned_cols=31 Identities=19% Similarity=0.196 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHc--CCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAF--RDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~--~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+ + ..+|+++..
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~-g~~V~~~~r 44 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHP-KAKVVVLDK 44 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCT-TSEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCC-CCeEEEEEC
Confidence 5899999 99999999999998 5 488888754
No 429
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=51.93 E-value=17 Score=34.02 Aligned_cols=39 Identities=21% Similarity=0.151 Sum_probs=29.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMA 130 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~a 130 (334)
.+|+|.|.|.+|+..++++.+...++.|.|-+. +++...
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r--~~~~a~ 164 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV--REKAAK 164 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS--SHHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC--CHHHHH
Confidence 589999999999999999887334777777663 555443
No 430
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=51.74 E-value=19 Score=35.62 Aligned_cols=41 Identities=24% Similarity=0.225 Sum_probs=31.3
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
.++.+|-|.|+|++|+.+++.|.+.+ .++|.|.. +++.+-.
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~-~~vvvid~---~~~~~~~ 165 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRN-HLFVVVTD---NYDQALH 165 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTT-CCEEEEES---CHHHHHH
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCC-CCEEEEEC---CHHHHHH
Confidence 34568999999999999999998764 78888854 5554433
No 431
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=51.66 E-value=18 Score=35.49 Aligned_cols=30 Identities=37% Similarity=0.520 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|+|.|.+|..+...+...+ ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G-~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG-ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CeEEEEE
Confidence 48999999999999999988775 7876653
No 432
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=51.31 E-value=11 Score=33.45 Aligned_cols=30 Identities=20% Similarity=0.412 Sum_probs=24.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 4899999 9999999999999876 6666644
No 433
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=51.23 E-value=15 Score=33.08 Aligned_cols=29 Identities=24% Similarity=0.291 Sum_probs=25.2
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
||-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 31 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNG-HDVIILD 31 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 789999 9999999999999875 7877764
No 434
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=51.19 E-value=14 Score=36.25 Aligned_cols=90 Identities=13% Similarity=0.025 Sum_probs=48.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
.+|.|.|.|.||+.+++.|.+.+ .+|+.++. +.+....+.+ . ++ . +.. +.+ ...|+
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G-~~V~v~~R---~~~~a~~la~--~-~~---~-~~~------------~~~-Dv~d~ 59 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG-IKVTVACR---TLESAKKLSA--G-VQ---H-STP------------ISL-DVNDD 59 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT-CEEEEEES---SHHHHHHTTT--T-CT---T-EEE------------EEC-CTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEEC---CHHHHHHHHH--h-cC---C-ceE------------EEe-ecCCH
Confidence 48999999999999999998764 77655543 3443322221 0 10 0 000 000 00111
Q ss_pred CCCCCCccCccEEEeccCCCCCHHHHHHHHHcCC
Q 019933 170 AEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGA 203 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGa 203 (334)
+++.=.-.++|+||.|+|.+...+.+...++.|.
T Consensus 60 ~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~ 93 (450)
T 1ff9_A 60 AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKK 93 (450)
T ss_dssp HHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCcEEEECCccccchHHHHHHHhCCC
Confidence 1110000268999999998766555555567665
No 435
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=51.09 E-value=19 Score=33.49 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=27.2
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++||.|.|-|..|+.+++++.+.+ ++++++..
T Consensus 11 ~~~ili~g~g~~~~~~~~a~~~~G-~~v~~~~~ 42 (391)
T 1kjq_A 11 ATRVMLLGSGELGKEVAIECQRLG-VEVIAVDR 42 (391)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-CEEEEEEC
Confidence 469999999999999999998875 78888753
No 436
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=50.63 E-value=16 Score=31.06 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=24.7
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+|-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~ 32 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG-HTVIGID 32 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC-CEEEEEe
Confidence 688999 9999999999999875 6777664
No 437
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=50.07 E-value=15 Score=33.80 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r 43 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN-YEVCIVDN 43 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEe
Confidence 5899999 9999999999999875 78887743
No 438
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=49.96 E-value=16 Score=30.28 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=24.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|||-|-| .|.||+.+++.|. ++ .+|+++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK-AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT-SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEe
Confidence 3799999 9999999999998 64 7777664
No 439
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=49.74 E-value=50 Score=32.55 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred eeEEEEcCChhHHH-HHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 90 TKVGINGFGRIGRL-VLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 90 ikVgINGfGrIGR~-vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
.||.|.|.|.+|.. +.|.|.+++ .+| .+.|. ........|-+ . | |.++...+
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V-~~~D~-~~~~~~~~l~~----------------~------g--i~~~~g~~ 75 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQI-SGSDL-APNSVTQHLTA----------------L------G--AQIYFHHR 75 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEE-EEECS-SCCHHHHHHHH----------------T------T--CEEESSCC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeE-EEEEC-CCCHHHHHHHH----------------C------C--CEEECCCC
Confidence 48999999999996 899998886 664 45664 22222222211 0 1 12222244
Q ss_pred CCCCCCCccCccEEEeccCCCCCHHHHHHHHHcC
Q 019933 169 PAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGG 202 (334)
Q Consensus 169 P~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aG 202 (334)
++++. ++|+||=+.|.-.+........+.|
T Consensus 76 ~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~g 105 (494)
T 4hv4_A 76 PENVL----DASVVVVSTAISADNPEIVAAREAR 105 (494)
T ss_dssp GGGGT----TCSEEEECTTSCTTCHHHHHHHHTT
T ss_pred HHHcC----CCCEEEECCCCCCCCHHHHHHHHCC
Confidence 55442 6899999999866544333333333
No 440
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=49.52 E-value=16 Score=32.41 Aligned_cols=31 Identities=19% Similarity=0.337 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 4899999 9999999999999875 78777654
No 441
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=49.31 E-value=13 Score=34.62 Aligned_cols=29 Identities=28% Similarity=0.562 Sum_probs=23.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc--eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV--DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~--eiVAI 119 (334)
+||+|.|.|.+|..++..+...+ + +|+.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g-~~~~V~l~ 31 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG-FAREMVLI 31 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCeEEEE
Confidence 38999999999999988887664 4 55544
No 442
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=49.24 E-value=18 Score=33.28 Aligned_cols=30 Identities=30% Similarity=0.368 Sum_probs=25.8
Q ss_pred eEEEEc-CChhHHHHHHHHH-cCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAA-FRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~-~~~d~eiVAIND 121 (334)
+|-|-| .|.||+.+++.|. +++ .+|+++..
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r 35 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDS 35 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCC-CEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHhCC-CEEEEEec
Confidence 899999 9999999999998 775 78877753
No 443
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=49.20 E-value=15 Score=31.20 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCc-eEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDV-DVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~-eiVAIN 120 (334)
.+|-|-| .|.||+.+++.|.+++.+ +|+++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~ 51 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIG 51 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEE
Confidence 4899999 999999999999987633 777664
No 444
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=49.17 E-value=13 Score=33.62 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=26.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCC----ceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDD----VDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d----~eiVAIND 121 (334)
+||-|-| .|.||+.+++.|.++++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 4899999 99999999999988753 78877754
No 445
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=49.09 E-value=10 Score=33.23 Aligned_cols=31 Identities=19% Similarity=0.463 Sum_probs=25.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcC-CCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~-~d~eiVAIND 121 (334)
+|.|-| .|.||+.+++.|.++ +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 789999 899999999999887 2478877754
No 446
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=49.02 E-value=15 Score=34.14 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=24.1
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++||+|.|.|.||..++..+..++-+.-+.+-|
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~D 38 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIID 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 469999999999998888777664333334445
No 447
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=48.72 E-value=13 Score=32.35 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=25.4
Q ss_pred eEEEEc-CChhHHHHHHHHHcC-CCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFR-DDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~-~d~eiVAIND 121 (334)
||.|-| .|.||+.+++.|.++ +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 578999 899999999999886 2478877753
No 448
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=48.21 E-value=15 Score=33.78 Aligned_cols=30 Identities=30% Similarity=0.402 Sum_probs=23.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCC-ceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDD-VDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d-~eiVAI 119 (334)
+||+|.|.|.+|..+...+...+- .+|+.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~ 32 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFI 32 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 599999999999999998877641 255444
No 449
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=48.06 E-value=18 Score=33.58 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.||+|.|-|..||.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999998875 78877753
No 450
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=47.76 E-value=19 Score=33.27 Aligned_cols=30 Identities=17% Similarity=0.089 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-||+|.|-|.-|+.+.+++.+.+ +++++++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G-~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAG-MKVVLVD 31 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998875 9999995
No 451
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=47.69 E-value=18 Score=32.88 Aligned_cols=31 Identities=16% Similarity=0.035 Sum_probs=26.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CeEEEEeC
Confidence 4899999 9999999999999875 78777753
No 452
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=47.61 E-value=26 Score=30.54 Aligned_cols=30 Identities=30% Similarity=0.356 Sum_probs=23.4
Q ss_pred eeEEEEc-CCh-hHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGR-IGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGr-IGR~vlRal~~~~d~eiVAIN 120 (334)
.+|-|-| .|+ ||+.+++.+.+++ ..|+.+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~ 54 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEG-ADVVISD 54 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCCchHHHHHHHHHHCC-CEEEEec
Confidence 3678889 585 9999999999885 6666553
No 453
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=47.01 E-value=15 Score=37.70 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.2
Q ss_pred eEEEEcCChhHHHHHHHHHcC-----CCceEEEEeC
Q 019933 91 KVGINGFGRIGRLVLRVAAFR-----DDVDVVAVND 121 (334)
Q Consensus 91 kVgINGfGrIGR~vlRal~~~-----~d~eiVAIND 121 (334)
||||+|+|.+|+.+.+.|... ..++++.-++
T Consensus 56 kIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 56 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp EEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 899999999999999998876 1367654343
No 454
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=46.53 E-value=19 Score=32.67 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| .|.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 4899999 9999999999999875 78777643
No 455
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=46.43 E-value=20 Score=32.11 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=25.8
Q ss_pred eEEEEc-CChhHHHHHHHHHcC-C-C---ceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFR-D-D---VDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~-~-d---~eiVAIND 121 (334)
||.|-| .|.||+.+++.|.++ . . .+|+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 899999 999999999999884 2 4 78877753
No 456
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=46.42 E-value=19 Score=32.77 Aligned_cols=30 Identities=10% Similarity=0.139 Sum_probs=24.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|.| .|.||+.+++.+...+ .+++++.
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEe
Confidence 3799999 8999999999988775 5777664
No 457
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=46.29 E-value=60 Score=31.39 Aligned_cols=30 Identities=37% Similarity=0.368 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.||.|.|.|..|..++|.|.+++ .+|. +.|
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~-~~D 39 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVT-VND 39 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEE-EEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEE-EEe
Confidence 48999999999999999999886 6644 445
No 458
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=46.20 E-value=20 Score=33.58 Aligned_cols=34 Identities=21% Similarity=0.169 Sum_probs=24.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
++||+|.|.|.||..++-.+...+-+.-+.+-|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4699999999999988877776653433344453
No 459
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=46.10 E-value=21 Score=32.39 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=27.4
Q ss_pred ccccCCCCCCceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 79 PTIQKSRSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 79 ~~~~~~~~~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
..+..++..+..+|.|+|-|.+|-..+..|.+++ ++|+-|-
T Consensus 7 ~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G-~~V~llE 47 (382)
T 1ryi_A 7 HMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKEN-KNTALFE 47 (382)
T ss_dssp -------CCSEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred hHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCC-CcEEEEe
Confidence 3334444555689999999999999999888874 6765553
No 460
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=46.04 E-value=23 Score=34.16 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.||+|.|-|.+||.+++++.+.+ ++++++.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG-~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMG-YRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 48999999999999999998875 8888774
No 461
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=45.82 E-value=70 Score=31.40 Aligned_cols=82 Identities=20% Similarity=0.209 Sum_probs=54.0
Q ss_pred eeEEEEcCC----hhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEe
Q 019933 90 TKVGINGFG----RIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFS 165 (334)
Q Consensus 90 ikVgINGfG----rIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~ 165 (334)
-+|+|.|.+ ++|+.+++.+.+.+..+|..||-- ++. +.|. .++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~------------------i~G~--~~y- 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEE------------------VQGV--KAY- 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSE------------------ETTE--ECB-
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCe------------------ECCE--ecc-
Confidence 489999955 889999999987644677777741 111 1231 222
Q ss_pred ccCCCCCCCCccCccEEEeccCCCCCHHHHHHHHHcCCCEEEE
Q 019933 166 KRDPAEIPWGDYGVDYVVESSGVFTTIAKASAHMKGGAKKVVI 208 (334)
Q Consensus 166 ~~dP~~i~W~~~gvDiVvEsTG~f~t~e~a~~hl~aGaKkVII 208 (334)
.+..+++- .+|+++=+++.....+..+.-++.|+|.+|+
T Consensus 56 -~sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 -KSVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp -SSTTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred -CCHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 23444442 6888888888766666666677788887654
No 462
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=45.66 E-value=24 Score=33.22 Aligned_cols=80 Identities=9% Similarity=0.112 Sum_probs=49.2
Q ss_pred eEEEE--cCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccC
Q 019933 91 KVGIN--GFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRD 168 (334)
Q Consensus 91 kVgIN--GfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~d 168 (334)
+|.|+ |.|.||...++++...+ .+++++.. +.+.+.++.+ .|- + ..++ .++
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~G-a~Vi~~~~---~~~~~~~~~~----lGa---------~--~~~~--------~~~ 225 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDG-IKLVNIVR---KQEQADLLKA----QGA---------V--HVCN--------AAS 225 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHT-CCEEEEES---SHHHHHHHHH----TTC---------S--CEEE--------TTS
T ss_pred EEEEECCCCCHHHHHHHHHHHHCC-CEEEEEEC---CHHHHHHHHh----CCC---------c--EEEe--------CCC
Confidence 68898 79999999999888765 68877742 4455544433 221 0 0111 011
Q ss_pred CCCCCCC--------ccCccEEEeccCCCCCHHHHHHHHH
Q 019933 169 PAEIPWG--------DYGVDYVVESSGVFTTIAKASAHMK 200 (334)
Q Consensus 169 P~~i~W~--------~~gvDiVvEsTG~f~t~e~a~~hl~ 200 (334)
-+|. ..++|+||||+|.-...+.+-..++
T Consensus 226 ---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~ 262 (379)
T 3iup_A 226 ---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCME 262 (379)
T ss_dssp ---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHH
T ss_pred ---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcc
Confidence 1121 1379999999998666666655554
No 463
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=44.87 E-value=23 Score=33.26 Aligned_cols=29 Identities=34% Similarity=0.416 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
.||+|.|.|.+|..++..+...+ + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE-LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 59999999999999998888765 5 54433
No 464
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=44.75 E-value=21 Score=31.56 Aligned_cols=29 Identities=17% Similarity=0.279 Sum_probs=25.0
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+|-|-| .|.||+.+++.|.+++ .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG-YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC-CEEEEEE
Confidence 789999 9999999999999875 7877654
No 465
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=44.58 E-value=12 Score=34.48 Aligned_cols=36 Identities=19% Similarity=0.094 Sum_probs=27.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMA 130 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~a 130 (334)
.+|-|.|+|++|+.+++.|.+++ . ++.| | .|++.+.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g-~-v~vi-d--~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSE-V-FVLA-E--DENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSC-E-EEEE-S--CGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCC-c-EEEE-e--CChhhhh
Confidence 47999999999999999998875 5 6666 4 2555544
No 466
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=44.46 E-value=19 Score=35.75 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=30.0
Q ss_pred CCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 87 DGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 87 ~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.| .+|+|.|+|.||-.+.-.+.+.+ ++|+++ | +|.+.+.-|
T Consensus 20 ~m-~~IaViGlGYVGLp~A~~~A~~G-~~V~g~-D--id~~kV~~l 60 (444)
T 3vtf_A 20 HM-ASLSVLGLGYVGVVHAVGFALLG-HRVVGY-D--VNPSIVERL 60 (444)
T ss_dssp CC-CEEEEECCSHHHHHHHHHHHHHT-CEEEEE-C--SCHHHHHHH
T ss_pred CC-CEEEEEccCHHHHHHHHHHHhCC-CcEEEE-E--CCHHHHHHH
Confidence 55 49999999999987766666554 888887 5 466655444
No 467
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=44.37 E-value=8.6 Score=36.24 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFR 111 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~ 111 (334)
+||+|.| .|.||..++..|.++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 3999999 999999998888765
No 468
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=44.29 E-value=21 Score=33.71 Aligned_cols=29 Identities=31% Similarity=0.573 Sum_probs=23.3
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAI 119 (334)
+||+|.|.|.+|..+...+...+ + +|+-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~-~~~v~L~ 37 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE-LGDVVLF 37 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEE
Confidence 59999999999999988887765 4 64443
No 469
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=44.09 E-value=22 Score=32.25 Aligned_cols=29 Identities=24% Similarity=0.217 Sum_probs=24.0
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
|||.|+|-|..|-.+...|..++ ++++-+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G-~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG-IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC-CCEEEE
Confidence 59999999999999888887764 776555
No 470
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=43.75 E-value=24 Score=33.13 Aligned_cols=32 Identities=34% Similarity=0.428 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
+||+|.|.|.+|..+...+...+-++ |.+-|.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 59999999999999988887765236 445453
No 471
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=43.64 E-value=23 Score=33.48 Aligned_cols=31 Identities=26% Similarity=0.162 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
-+|.|.|.|.+|+.+++.+...+ .+|++++-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 48999999999999999998876 57776653
No 472
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=43.45 E-value=19 Score=31.74 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=26.6
Q ss_pred CCCCceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 85 RSDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 85 ~~~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
..+|+.+|.|+|-|..|-..+..|.+++ ++++-|-.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~vie~ 53 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAE-IKPILYEG 53 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTT-CCCEEECC
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEec
Confidence 3356689999999999999998888774 66655543
No 473
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=43.04 E-value=72 Score=31.17 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=51.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhhhccccccccCCCeEEEeCCCeEEECCEEEEEEeccCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYMFKYDSTHGVFKGTINVVDDSTLEINGKLIKVFSKRDP 169 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayLlkYDSthGkf~~~v~~e~~~~L~inGk~I~V~~~~dP 169 (334)
.+|-|.|.|++|...++.|.+.+ -+|+.| ++.... .+..|.+ . | .+.. +..+-++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi-~~~~~~-~~~~l~~--~--~----~i~~--------------~~~~~~~ 67 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVN-ALTFIP-QFTVWAN--E--G----MLTL--------------VEGPFDE 67 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEE-ESSCCH-HHHHHHT--T--T----SCEE--------------EESSCCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEE-cCCCCH-HHHHHHh--c--C----CEEE--------------EECCCCc
Confidence 48999999999999999999875 444434 332333 2222221 0 0 1111 0011123
Q ss_pred CCCCCCccCccEEEeccCCC-CCHHHHHHHHHcCCCEEEEeCC
Q 019933 170 AEIPWGDYGVDYVVESSGVF-TTIAKASAHMKGGAKKVVISAP 211 (334)
Q Consensus 170 ~~i~W~~~gvDiVvEsTG~f-~t~e~a~~hl~aGaKkVIISaP 211 (334)
++++ ++|+||=|||.- .+..-+....+.|..--+++.|
T Consensus 68 ~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~ 106 (457)
T 1pjq_A 68 TLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAP 106 (457)
T ss_dssp GGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCT
T ss_pred cccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCc
Confidence 3332 789999999976 3444444444566632234555
No 474
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=42.72 E-value=14 Score=33.94 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=24.2
Q ss_pred eeEEEEcCC-hhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGINGFG-RIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgINGfG-rIGR~vlRal~~~~d~eiVAIN 120 (334)
-+|.|.|-| .||..+++++...+ .+++++.
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~ 176 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILN-FRLIAVT 176 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-CEEEEEe
Confidence 379999955 99999999888765 6877764
No 475
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=42.70 E-value=23 Score=33.01 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=24.3
Q ss_pred ceeEEEEcC-ChhHHHHHHHHHcCCCc------eEEEE
Q 019933 89 NTKVGINGF-GRIGRLVLRVAAFRDDV------DVVAV 119 (334)
Q Consensus 89 ~ikVgINGf-GrIGR~vlRal~~~~d~------eiVAI 119 (334)
++||+|.|- |.||..++..|..++.+ +|+.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~ 42 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL 42 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE
Confidence 469999995 99999999988876532 66655
No 476
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=42.03 E-value=26 Score=32.68 Aligned_cols=24 Identities=33% Similarity=0.415 Sum_probs=20.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRD 112 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~ 112 (334)
++||+|.|.|.||..++-.+...+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~ 30 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQ 30 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC
Confidence 369999999999998888887765
No 477
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=41.95 E-value=20 Score=34.15 Aligned_cols=32 Identities=28% Similarity=0.535 Sum_probs=27.7
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
..||+|.|-|..||.+++++.+.+ ++++++.+
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG-~~v~~~d~ 55 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLN-IQVNVLDA 55 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 469999999999999999998875 88888863
No 478
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=41.94 E-value=23 Score=34.94 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=26.5
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+||+|.|.|.+|..+...+.+.+ ++|+.++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D 38 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVD 38 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 379999999999999999888875 7877775
No 479
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=41.84 E-value=26 Score=31.77 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=28.4
Q ss_pred CCCCceeEEEEcCCh---------hHHHHHHHHHcCCCceEEEEeC
Q 019933 85 RSDGNTKVGINGFGR---------IGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 85 ~~~M~ikVgINGfGr---------IGR~vlRal~~~~d~eiVAIND 121 (334)
...|++||+|..-|+ -|+.++++|.+.+ ++++.|+.
T Consensus 9 ~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g-~~v~~i~~ 53 (317)
T 4eg0_A 9 DPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAG-IDAHPFDP 53 (317)
T ss_dssp CGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT-CEEEEECT
T ss_pred chhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCC-CEEEEEeC
Confidence 445778999997664 5899999998874 89888873
No 480
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=41.82 E-value=24 Score=33.28 Aligned_cols=42 Identities=12% Similarity=-0.100 Sum_probs=29.5
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhh
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAY 131 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ay 131 (334)
|.++|||.|-| -|+.+++++.+.+ ++++++-....++.|.++
T Consensus 1 ~~~~I~~lGsg-l~~~~~~aAk~lG-~~viv~d~~~~~p~~~a~ 42 (320)
T 2pbz_A 1 MSLIVSTIASH-SSLQILLGAKKEG-FKTRLYVSPKRRPFYSSL 42 (320)
T ss_dssp ---CEEEESST-THHHHHHHHHHTT-CCEEEEECTTTHHHHHTC
T ss_pred CceEEEEEcCH-hHHHHHHHHHHCC-CEEEEEECCCCCccchhh
Confidence 56789999999 8999999999886 998887653222444343
No 481
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=41.66 E-value=21 Score=30.72 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=24.2
Q ss_pred eEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 91 KVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 91 kVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
||-|-| .|.||+.+++.|.+ + .+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g-~~V~~~~r 31 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-R-HEVIKVYN 31 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-T-SCEEEEES
T ss_pred EEEEECCCChhHHHHHHHHhc-C-CeEEEecC
Confidence 799999 99999999999984 3 77777643
No 482
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=40.63 E-value=33 Score=29.51 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=27.1
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.||.|.|-|--||.+++.+.+. +++++++=|
T Consensus 13 k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfiD 43 (220)
T 4ea9_A 13 GGVVIIGGGGHAKVVIESLRAC-GETVAAIVD 43 (220)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCEEEEcCCHHHHHHHHHHHhC-CCEEEEEEe
Confidence 4899999999999999999874 589888866
No 483
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=40.59 E-value=28 Score=32.00 Aligned_cols=29 Identities=10% Similarity=0.202 Sum_probs=23.2
Q ss_pred eEEEE-cCChhHHHHHHHHHcCCCceEEEEe
Q 019933 91 KVGIN-GFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 91 kVgIN-GfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
+|-|+ |.|.||..+++++...+ .+++++-
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~ 196 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTV 196 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 56666 59999999999988775 6887774
No 484
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=40.45 E-value=27 Score=32.13 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCc-eEEEEeC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDV-DVVAVND 121 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~-eiVAIND 121 (334)
.+|.|.|.|.+||.+++.|.+.+ + +|+.+|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G-~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA-AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 38999999999999999998875 5 6666664
No 485
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=40.34 E-value=30 Score=32.83 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=28.6
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHHHhhh
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKYMAYM 132 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~~ayL 132 (334)
.+|+|.|.|.+|+..++++.....++-|.|-+. +++...-+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r--~~~~a~~l 170 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT--DPLATAKL 170 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS--SHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC--CHHHHHHH
Confidence 489999999999999988754324666666663 55444333
No 486
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=40.22 E-value=24 Score=35.60 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=25.2
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP 122 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~ 122 (334)
.+|.|.|+|.||+.+.+.+...+ ..|+ +.|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G-A~Vi-v~D~ 296 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG-ARVI-VTEI 296 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 48999999999999999998876 6654 4564
No 487
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=40.20 E-value=29 Score=30.28 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=25.2
Q ss_pred CCCCceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 85 RSDGNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 85 ~~~M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
...|..+|-|-| .|-||+.+++.|.+++ .+|+.+.
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~ 53 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKS-WNTISID 53 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 345655788999 9999999999999875 6665553
No 488
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=40.19 E-value=23 Score=29.95 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=24.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|-|-| .|-||+.+++.|.+++ .+|+.+.
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G-~~V~~~~ 33 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARG-YRVVVLD 33 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-CEEEEEc
Confidence 4788999 9999999999998875 6666553
No 489
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=40.07 E-value=25 Score=32.82 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=27.9
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeC
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND 121 (334)
..||.|.|-|.+++.++|++.+.+ ++++++..
T Consensus 7 ~~~ilI~g~g~~~~~~~~a~~~~G-~~~v~v~~ 38 (403)
T 4dim_A 7 NKRLLILGAGRGQLGLYKAAKELG-IHTIAGTM 38 (403)
T ss_dssp CCEEEEECCCGGGHHHHHHHHHHT-CEEEEEEC
T ss_pred CCEEEEECCcHhHHHHHHHHHHCC-CEEEEEcC
Confidence 359999999999999999998875 89999954
No 490
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=40.04 E-value=21 Score=34.04 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=25.4
Q ss_pred CCCceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 86 SDGNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 86 ~~M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
..|+.+|.|+|-|..|..+...|..++ ++++-|-
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~~G-~~V~viE 52 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQHD-VDVTVYT 52 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHHCC-CeEEEEc
Confidence 346679999999999999998888875 7766664
No 491
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=39.97 E-value=26 Score=32.97 Aligned_cols=32 Identities=22% Similarity=0.119 Sum_probs=28.0
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|++||...|+.-.+...|++|.+.+ ++||+|-
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~~-~~v~~Vv 32 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDSS-HRVLAVY 32 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHSS-SEEEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 6679999999999999999998864 8988874
No 492
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=39.44 E-value=21 Score=32.05 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCC------ceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDD------VDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d------~eiVAIN 120 (334)
++|-|-| .|.||+.+++.|.+++. .+|+++.
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 5899999 99999999999988752 5666654
No 493
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=39.22 E-value=22 Score=31.87 Aligned_cols=30 Identities=27% Similarity=0.233 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
.+|-|-| .|.||+.+++.|.+++ .+|+++-
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~ 36 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERG-YTVRATV 36 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEE
Confidence 4899999 9999999999999875 7777653
No 494
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=38.96 E-value=27 Score=33.11 Aligned_cols=35 Identities=26% Similarity=0.206 Sum_probs=26.8
Q ss_pred eeEEEEcCChhHHHHHHHHHcCCCceEEEEeCCCCCHHH
Q 019933 90 TKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDPFIDAKY 128 (334)
Q Consensus 90 ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~~~d~~~ 128 (334)
-||+|+|.|.+|+.+...+...+ ++|+ +-|+ +++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G-~~V~-l~D~--~~~~ 41 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGG-FRVK-LYDI--EPRQ 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEE-EECS--CHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCC-CeEE-EEEC--CHHH
Confidence 48999999999999998888775 7754 4464 5544
No 495
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=38.73 E-value=28 Score=29.61 Aligned_cols=32 Identities=22% Similarity=0.143 Sum_probs=25.8
Q ss_pred CceeEEEEc-CChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGING-FGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgING-fGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|..+|-|-| .|.||+.+++.|.+++ .+|+.+.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~ 36 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKG-YRVGLMA 36 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 434688999 9999999999999875 6776664
No 496
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=38.71 E-value=19 Score=35.00 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
++|-|-| +|.||+.+++.|.++ ..+|+++..
T Consensus 151 ~~VLVTGatG~iG~~l~~~L~~~-g~~V~~l~R 182 (508)
T 4f6l_B 151 GNTLLTGATGFLGAYLIEALQGY-SHRIYCFIR 182 (508)
T ss_dssp EEEEESCTTSHHHHHHHHHTBTT-EEEEEEEEE
T ss_pred CeEEEECCccchHHHHHHHHHhc-CCEEEEEEC
Confidence 5899999 999999999999655 478877764
No 497
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=38.58 E-value=32 Score=29.76 Aligned_cols=31 Identities=23% Similarity=0.075 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHcCCCceEEEEeC
Q 019933 90 TKVGING-FGRIGRLVLRVAAFRDDVDVVAVND 121 (334)
Q Consensus 90 ikVgING-fGrIGR~vlRal~~~~d~eiVAIND 121 (334)
.+|-|-| .|.||+.+++.|.+++ .+|+.+..
T Consensus 22 k~vlItGasggiG~~la~~l~~~G-~~v~~~~r 53 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRG-ASVVVNYG 53 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcC
Confidence 3688999 9999999999999886 67766543
No 498
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=38.56 E-value=19 Score=34.26 Aligned_cols=110 Identities=18% Similarity=0.124 Sum_probs=53.4
Q ss_pred ceeEEEEcCChhHHHHHHHHHcCCCceEEEEeCC-CCCHHHHhhhhccc-cccccCCCeEEEeCCCeEEEC-CEEEEEEe
Q 019933 89 NTKVGINGFGRIGRLVLRVAAFRDDVDVVAVNDP-FIDAKYMAYMFKYD-STHGVFKGTINVVDDSTLEIN-GKLIKVFS 165 (334)
Q Consensus 89 ~ikVgINGfGrIGR~vlRal~~~~d~eiVAIND~-~~d~~~~ayLlkYD-SthGkf~~~v~~e~~~~L~in-Gk~I~V~~ 165 (334)
.-||.|.|.|.+|..++..|...+ +.-+.|-|. ..+...+..-+-|+ ..-|+...+.-.+ .--.+| .-.|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG-vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~--~l~~~np~v~v~~~~ 194 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG-IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKR--ELLKRNSEISVSEIA 194 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHH--HHHHHCTTSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHH--HHHHHCCCCeEEEee
Confidence 358999999999999999888764 432233231 24444443322221 1123321110000 000011 11223322
Q ss_pred cc-CCCC-CC-CCccCccEEEeccCCCC-CHHHHH-HHHHcCC
Q 019933 166 KR-DPAE-IP-WGDYGVDYVVESSGVFT-TIAKAS-AHMKGGA 203 (334)
Q Consensus 166 ~~-dP~~-i~-W~~~gvDiVvEsTG~f~-t~e~a~-~hl~aGa 203 (334)
++ +..+ +. +. +.|+||+|+..+. ++.... ...+.|.
T Consensus 195 ~~i~~~~~~~~~~--~~DlVvd~~Dn~~~~r~~ln~~c~~~~~ 235 (353)
T 3h5n_A 195 LNINDYTDLHKVP--EADIWVVSADHPFNLINWVNKYCVRANQ 235 (353)
T ss_dssp CCCCSGGGGGGSC--CCSEEEECCCCSTTHHHHHHHHHHHTTC
T ss_pred cccCchhhhhHhc--cCCEEEEecCChHHHHHHHHHHHHHhCC
Confidence 21 1111 11 33 7899999999888 654432 3345565
No 499
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=38.36 E-value=28 Score=30.89 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=24.8
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEE
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAV 119 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAI 119 (334)
|+.+|.|+|-|.+|-.+...|.+++ ++|+-+
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vl 31 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG-HQVHLF 31 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCEEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC-CcEEEE
Confidence 4568999999999999999888764 676555
No 500
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=38.22 E-value=34 Score=29.50 Aligned_cols=32 Identities=16% Similarity=-0.025 Sum_probs=25.9
Q ss_pred CceeEEEEcCChhHHHHHHHHHcCCCceEEEEe
Q 019933 88 GNTKVGINGFGRIGRLVLRVAAFRDDVDVVAVN 120 (334)
Q Consensus 88 M~ikVgINGfGrIGR~vlRal~~~~d~eiVAIN 120 (334)
|+.+|.|+|-|..|-..+..|.+++ ++++-|-
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie 32 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR-KNILLVD 32 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CCEEEEe
Confidence 5679999999999999988887764 6665554
Done!