Citrus Sinensis ID: 019935

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
Protein Sequence
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccccHHHHHccccccccEEEEEEcccccccHHHHHHccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccHHHHHHHHHHccccEEEEcccccccccccHHHHHHHHHHHcccccccccEEEEcccccccccccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccHHccccccccccccccccccccccccccccccccccEcccccEEEEccccccccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccccccccEEEEEcccccccHHHHHHccccEEEEEccccccccccccccccccEccHHHHHHHHHHHHccccEEEEEEEccccccccccccHHcHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHcccccccEEEEcccccccccccHHHHHHHHHHHHccHHHHccEEEEEccccccccccHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MATELFFFtsipnlpfplikfpkhhqslplfslapptissrfktvssskarpssstVVVHAVQEEvvqtpnsdskvtpassSKLVLVAGGSGGVGQLVVASLLSRNiksrlllrdpekattlfgkqdeetlqvckgdtrnpkdldpaifEGVTHVIcctgttafpsrrwdgdntpekvdWEGVRNLVSALPSSLKRIVLVSSVgvtkfnelpWSIMNLFGVLKYKKMGedfvqksglpftiiragrltdgpytsydLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIeftegeiyeinsvegegpgsdpqKWRELFKAAKAK
Flexible Loop (DISEMBL)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFktvssskarpssstvVVHAVQEEvvqtpnsdskvtpaSSSKLVLVAGGSGGVGQLVVASLLSrniksrlllrdpekattlfgkqdeetlqvckgdtrnpkdldpAIFEGVTHVICCTGttafpsrrwdgdnTPEKVDWEGVRNLVSalpsslkrIVLVSSvgvtkfnelpwSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINsvegegpgsdpqKWRELFKAAKAK
Low Complexity Region (SEG)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTvvvhavqeevvqTPNSDSKVTPAsssklvlvaggsggvgqlvvasllsRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK
Disordered region (IsUnstruct)
****LFFFTSIPNLPFPLIKFPKHHQSLPLFSL**************************************************LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP**ATTLF*******LQVCK*******DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN************************
Disordered Region (DISOPRED)
************NLPFPLIKFPKHHQSLP********************************************************LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT**FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAA***
Disordered Region (DISEMBL)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISS******************VHAVQEEV**************SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK
Disordered Region (DISPRO)
*ATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTI*****************TVVVHAVQEEVVQT***********SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	333	2.2.26 [Sep-21-2011]
O80934	325	Uncharacterized protein A	no	no	0.675	0.692	0.314	1e-19
Q8H124	280	Uncharacterized protein A	no	no	0.687	0.817	0.329	2e-18
Q8H0U5	641	Protein TIC 62, chloropla	no	no	0.615	0.319	0.313	8e-16
Q94EG6	253	Uncharacterized protein A	no	no	0.657	0.865	0.291	2e-15
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.645	0.402	0.304	4e-15
P48279	321	Uncharacterized protein y	N/A	no	0.591	0.613	0.237	0.0001
P51238	319	Uncharacterized protein y	N/A	no	0.588	0.614	0.243	0.0002
Q1XDP9	319	Uncharacterized protein y	N/A	no	0.483	0.504	0.265	0.0005
Q54LW0	301	Prestalk A differentiatio	yes	no	0.570	0.631	0.294	0.0006

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 45/270 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV G  G  GQ+V   L  R+ +  +R L+R  E    + G +DE    V  GD R+  
Sbjct: 79  VLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKING-EDE----VFIGDIRDTA 133

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
            + PA+ EG+  ++  T  +A P  +              +D    PE+VDW G +N + 
Sbjct: 134 SIAPAV-EGIDALVILT--SAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190

Query: 189 ALPSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRL 247
           A  ++ +K+IVLV S+G T  N    SI N   +L +K+  E ++  SG+P+TIIRAG L
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA-NILVWKRKAEQYLADSGIPYTIIRAGGL 249

Query: 248 TDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV----VAEACIQALDIEFTEG 303
            D                G  R +L+G+ D+L+   +R +    VAE C+QAL +E  + 
Sbjct: 250 QD--------------KDGGIRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKF 295

Query: 304 EIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           +  ++ S + EG G+  + ++ LF     K
Sbjct: 296 KALDLAS-KPEGTGTPTKDFKALFTQVTTK 324

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 35/264 (13%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD- 137
           A  +K V VAG +G  G+ +V  LLSR    +  +RD EKA T F  +D+ +LQ+ + D 
Sbjct: 43  AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF--KDDPSLQIVRADV 100

Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKR 196
           T  P  L   I +    VIC TG      R      TP KVD  G  NLV A     +++
Sbjct: 101 TEGPDKLAEVIGDDSQAVICATGF-----RPGFDIFTPWKVDNFGTVNLVDACRKQGVEK 155

Query: 197 IVLVSSVGVT-----KFNELPWSIMNLFGV-LKYKKMGEDFVQKSGLPFTIIRAGRLTDG 250
            VLVSS+ V      +     +  +NLFG+ L  K   E +++KSG+ +TI+R G L + 
Sbjct: 156 FVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKND 215

Query: 251 PYTSYDLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAEACIQALDIEFTEGEIYEIN 309
           P T                 V+M   D L  G +SR +VAE  ++AL  E +  ++ EI 
Sbjct: 216 PPTG---------------NVVMEPEDTLYEGSISRDLVAEVAVEALLQEESSFKVVEIV 260

Query: 310 SVEGEGPGSDPQKWRELFKAAKAK 333
           +   E P    + +++LF + K +
Sbjct: 261 A-RAEAP---KRSYKDLFASVKGQ 280

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 41/246 (16%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-------------GKQDEET 130
           LV VAG +G VG   V  LL    + R  +R  ++A +L              G Q  E 
Sbjct: 83  LVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEK 142

Query: 131 LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEGVRNLVSA 189
           L++ + D      + PA+    + +ICC G     S +   D T P ++D+   +NLV A
Sbjct: 143 LEIVECDLEKKDSIQPALGNA-SVIICCIGA----SEKEISDITGPYRIDYLATKNLVDA 197

Query: 190 LPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFTIIRAG-- 245
             S+ +   +LV+S+G  KF   P +I+NLF GVL +K+  E+ + +SGL + I+R G  
Sbjct: 198 ATSAKVNNFILVTSLGTNKFG-FPAAILNLFWGVLCWKRKAEEALIESGLNYAIVRPGGM 256

Query: 246 -RLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE--ACIQALDIEFTE 302
            R TD    +++L   L  T       L G      G+VS + VAE  AC+ A + + + 
Sbjct: 257 ERPTDAYKETHNLTLALDDT-------LFG------GQVSNLQVAELLACM-AKNPQLSF 302

Query: 303 GEIYEI 308
            +I E+
Sbjct: 303 SKIVEV 308

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 45/264 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV G SG  GQ+V   L   + K  ++ L+R  +    + G+ D     V  GD  +  
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD-----VFIGDITDAD 61

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
            ++PA F+G+  ++  T  +A P  +              ++    PE+VDW G +N + 
Sbjct: 62  SINPA-FQGIDALVILT--SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query: 189 ALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRL 247
           A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TIIRAG L
Sbjct: 119 AAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177

Query: 248 TDGPYTSYDLNTLLKATAGERRAVLMGQGDKLI----GEVSRIVVAEACIQALDIEFTEG 303
            D                G  R +L+G+ D+L+      V R  VAE CIQAL  E  + 
Sbjct: 178 LD--------------KEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKN 223

Query: 304 EIYEINSVEGEGPGSDPQKWRELF 327
           + +++ S + EG  +  + ++ LF
Sbjct: 224 KAFDLGS-KPEGTSTPTKDFKALF 246

Arabidopsis thaliana (taxid: 3702)

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 119/250 (47%), Gaps = 35/250 (14%)

Query: 77  TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF------------- 123
           T +    LV VAG +G VG   V  L+    K R  +R+ +KA  L              
Sbjct: 83  TDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASG 142

Query: 124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
           G +  E L++ + D      +  A+    T VIC  G     S +   D T P ++D+  
Sbjct: 143 GGEAVEKLEIVECDLEKADQIGSALGNAST-VICAIGA----SEKEIFDITGPCRIDYRA 197

Query: 183 VRNLV-SALPSSLKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFT 240
            +NLV +A  + +   +LV+S+G  KF  LP +I+NLF GVL +K+  E+ +  SG+P+T
Sbjct: 198 TKNLVDAATVAKVNHFILVTSLGTNKFG-LPAAILNLFWGVLIWKRKAEEALLASGIPYT 256

Query: 241 IIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAE-ACIQALDI 298
           I+R G + + P  +Y           E   V +   D L  G+VS + VAE   I A + 
Sbjct: 257 IVRPGGM-ERPTDAYK----------ETHNVTLSTEDTLFGGQVSNLQVAELMAIMAKNP 305

Query: 299 EFTEGEIYEI 308
           + +  +I E+
Sbjct: 306 DLSYCKIVEV 315

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 26/223 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V S L    + R L+R+  KA  L     E   ++  GD   P+ L
Sbjct: 3   ILVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFL----KEWGAKLIWGDLSQPESL 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSV 203
            PA+  G+  VI  T T    SR  D     + VD +G + L+ A  +  +++ +  S +
Sbjct: 59  LPAL-TGI-RVIIDTST----SRPTDPAGVYQ-VDLKGKKALIDAAKAMKIEKFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
              K++++P        +++ K + E+ +++SGL +TI +      G    Y +  L   
Sbjct: 112 NSEKYSQVP--------LMRIKTVTEELLKESGLNYTIFKLCGFFQGLIGQYAVPIL--- 160

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIY 306
              +++ V +      I  +  I +A   +++L ++ T   ++
Sbjct: 161 ---DQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETNNRVF 200

Cyanophora paradoxa (taxid: 2762)

EC: 1

EC: .

EC: -

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EC: -

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EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V   L      + ++R+  K+  L     E   ++  GD + P+ +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFL----KEWGAELVYGDLKLPESI 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             + F GVT VI    +T+ PS   D  NT E++D +G   L+ A  ++ ++R +  S +
Sbjct: 59  LQS-FCGVTAVI--DASTSRPS---DPYNT-EQIDLDGKIALIEAAKAAKVQRFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
              ++ ++P  +MNL      K    +++QKS + +T+   G    G  + Y +  L   
Sbjct: 112 NADQYPKVP--LMNL------KSQVVNYLQKSSISYTVFSLGGFFQGLISQYAIPIL--- 160

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEI 305
              ++++V +      I  +     A+  I++L +  TE  I
Sbjct: 161 ---DKKSVWVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRI 199

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

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EC: -

EC: .

EC: -

>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 20/181 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V   L      + ++R+  K+  L     E   ++  GD + P+ +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFL----KEWGAELIYGDLKLPESI 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             + F GVT +I      A  SR  D  N  EK+D +G   L+ A  ++ ++R +  S +
Sbjct: 59  LQS-FCGVTAII-----DASTSRLPDPYNA-EKIDLDGKIALIEAAKAAKVERFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
              K+ ++P  +MNL      K    DF+QKS + + +   G    G    Y +  L K 
Sbjct: 112 NSEKYPDVP--LMNL------KSQVVDFLQKSNVKYIVFSLGGFFQGLINQYAIPILDKK 163

Query: 264 T 264
           +
Sbjct: 164 S 164

Porphyra yezoensis (taxid: 2788)

EC: 1

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EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q54LW0|PADA_DICDI Prestalk A differentiation protein A OS=Dictyostelium discoideum GN=padA PE=3 SV=2

 Score = 45.4 bits (106), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 107/234 (45%), Gaps = 44/234 (18%)

Query: 77  TPASSSKL-VLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTL-FGKQDEETLQ 132
           T  +S+K+ +LV GG+G VG+ VV SL  R  NI  R+  RD +K   L FGK    T  
Sbjct: 3   TNITSTKMSILVTGGTGVVGRQVVKSLELREKNINIRVGGRDQDKCNQLGFGKNSTFT-- 60

Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS 192
             + D  +P   D ++ EGV  V       A P      D TPEK     +         
Sbjct: 61  --RFDFMDPTTWDKSL-EGVDRVFL----IALPM-----DPTPEKSLGPFIE---KCKER 105

Query: 193 SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIR----AGRLT 248
            LK+IV++S +   +   +P        ++K ++M    VQ SGL F I+R    +   +
Sbjct: 106 KLKKIVVLSVIDAER---VP--------LVKIEQM----VQGSGLTFVILRPPFFSENFS 150

Query: 249 DGPYTSYDLNT-LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT 301
           +G +  +D++   ++   GE     +   D  IGE + IV+ ++      IE T
Sbjct: 151 EG-FMKHDIDQGTIRVPVGEHSVNWISTHD--IGECASIVLMDSKFDGRTIEIT 201

Involved in development and cell differentiation.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
225436583	336	PREDICTED: uncharacterized protein At2g3	0.996	0.988	0.780	1e-136
449442565	340	PREDICTED: uncharacterized protein At2g3	0.957	0.938	0.746	1e-131
449518143	340	PREDICTED: uncharacterized protein At2g3	0.957	0.938	0.743	1e-130
224054522	286	predicted protein [Populus trichocarpa]	0.840	0.979	0.842	1e-127
356560673	324	PREDICTED: uncharacterized protein At2g3	0.933	0.959	0.701	1e-120
297802876	324	catalytic/ coenzyme binding protein [Ara	0.894	0.919	0.760	1e-119
30689062	324	Rossmann-fold NAD(P)-binding domain-cont	0.894	0.919	0.757	1e-118
356504448	334	PREDICTED: uncharacterized protein At5g0	0.963	0.961	0.689	1e-117
293332867	336	uncharacterized protein LOC100381586 [Ze	0.819	0.812	0.791	1e-117
5262764	329	putative protein [Arabidopsis thaliana]	0.894	0.905	0.745	1e-116

>gi|225436583|ref|XP_002274972.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic [Vitis vinifera] gi|296083822|emb|CBI24210.3| unnamed protein product [Vitis vinifera]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/337 (78%), Positives = 284/337 (84%), Gaps = 5/337 (1%)

Query: 1   MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVH 60
           MAT L     I   P    K PK+ Q +P+FSL P            S         V H
Sbjct: 1   MATNLQLL-PIHGFPLSSWKCPKYPQRVPVFSLQPLNPPPPPPPSPKSILSSRRRASVAH 59

Query: 61  AVQEEVVQTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116
           AV+EEV+Q+PNSD    SK +P +SSKLVLV GGSGGVGQL+VASLL RNIKSRLLLRDP
Sbjct: 60  AVKEEVIQSPNSDPALDSKTSPPASSKLVLVVGGSGGVGQLIVASLLDRNIKSRLLLRDP 119

Query: 117 EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPE 176
           EKAT+LFGKQDEETLQV KGDTRN +DL+ +IFEGVTHVICCTGTTAFPS+RWDGDNTPE
Sbjct: 120 EKATSLFGKQDEETLQVYKGDTRNLEDLNSSIFEGVTHVICCTGTTAFPSKRWDGDNTPE 179

Query: 177 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG 236
           KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF+  SG
Sbjct: 180 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFLCSSG 239

Query: 237 LPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL 296
           LPFTIIRAGRLTDGPYTSYDLNTLLKATAG+RRAVLMGQGDKL+GEVSRIVVAEACIQAL
Sbjct: 240 LPFTIIRAGRLTDGPYTSYDLNTLLKATAGQRRAVLMGQGDKLVGEVSRIVVAEACIQAL 299

Query: 297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           DIEFTEG+IYEINSVEG+GPGSDPQKW+ELFK A+AK
Sbjct: 300 DIEFTEGKIYEINSVEGDGPGSDPQKWQELFKTAEAK 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442565|ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/332 (74%), Positives = 280/332 (84%), Gaps = 13/332 (3%)

Query: 8   FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
            + IP+ P P   F K  Q+LPLF+L P   SS F     KT+SS +  PS +   + A+
Sbjct: 9   LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            +EVVQTP+S    DSK  P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65  NQEVVQTPSSKSTRDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           ATTLFG+QDE+ LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 ATTLFGEQDEKLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKK GEDF++ SGLP
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRDSGLP 244

Query: 239 FTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI 298
           FTIIR GRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKL+GE SRIVVAEACIQALDI
Sbjct: 245 FTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLLGQGDKLVGEASRIVVAEACIQALDI 304

Query: 299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAA 330
            FTEG+ YEINS+EGEGPG+DPQKW ELFK A
Sbjct: 305 GFTEGQAYEINSIEGEGPGNDPQKWSELFKGA 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518143|ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/332 (74%), Positives = 278/332 (83%), Gaps = 13/332 (3%)

Query: 8   FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
            + IP+ P P   F K  Q+LPLF+L P   SS F     KT+SS +  PS +   + A+
Sbjct: 9   LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            +EVVQTP+S    DSK  P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65  NQEVVQTPSSESTHDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           A TLFG+QDE  LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 AATLFGEQDENLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKK GEDF++ SGLP
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRDSGLP 244

Query: 239 FTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI 298
           FTIIR GRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKL+GE SRIVVAEACIQALDI
Sbjct: 245 FTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLLGQGDKLVGEASRIVVAEACIQALDI 304

Query: 299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAA 330
            FTEG+ YEINS+EGEGPG+DPQKW ELFK A
Sbjct: 305 GFTEGQAYEINSIEGEGPGNDPQKWSELFKGA 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054522|ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|222845560|gb|EEE83107.1| predicted protein [Populus trichocarpa]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/285 (84%), Positives = 264/285 (92%), Gaps = 5/285 (1%)

Query: 54  SSTVVVHAVQEEVV-QTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIK 108
           +S +V HAV+EEV+ Q+PNS+    S+ TP SSSKLVLV GGSGGVGQLVVA+LL+RNIK
Sbjct: 2   TSPLVAHAVKEEVIDQSPNSEATLGSETTPPSSSKLVLVVGGSGGVGQLVVAALLNRNIK 61

Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRR 168
           SRLLLRDPEKA  LFGKQDEE +QV KGDTRNP+DLDP++FEGVTHVICCTGTTAFPSRR
Sbjct: 62  SRLLLRDPEKAVALFGKQDEEKMQVYKGDTRNPEDLDPSLFEGVTHVICCTGTTAFPSRR 121

Query: 169 WDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG 228
           WDGDNTPE+ DWEGVRNLVSALPS+LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG
Sbjct: 122 WDGDNTPERTDWEGVRNLVSALPSTLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG 181

Query: 229 EDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV 288
           EDFV KSGLPFTIIR  RLTDGPYTSYDLNTLLKATAG+RRAV++GQGDKL+GEVSRIVV
Sbjct: 182 EDFVLKSGLPFTIIRPARLTDGPYTSYDLNTLLKATAGKRRAVVIGQGDKLVGEVSRIVV 241

Query: 289 AEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           AEACIQALDIEFTEGEIYEINSVEGEGPG DP+KW+ELFK  +++
Sbjct: 242 AEACIQALDIEFTEGEIYEINSVEGEGPGCDPRKWKELFKNPQSQ 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560673|ref|XP_003548614.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Glycine max]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/322 (70%), Positives = 268/322 (83%), Gaps = 11/322 (3%)

Query: 19  IKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTV------VVHAVQEEVVQTPNS 72
           + F + H S+    +   T  S   ++SSS A   S           +A+ EE V+T +S
Sbjct: 1   MAFAQRHHSVTQRQVLFFTKFSNRVSLSSSLASKRSCNYNCFYAKAQNALNEEAVETKSS 60

Query: 73  ----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
               D++ TP SSSKLVLVAGGSGGVGQLVVASLL +NIKSRL+LR+P+KAT LFG+QD+
Sbjct: 61  ELKKDTQRTP-SSSKLVLVAGGSGGVGQLVVASLLQQNIKSRLILRNPDKATELFGEQDK 119

Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS 188
           E LQV KGDTR   DLDP++FEGVTHVICCTGTTAFPSRRWD DNTPE+VDW GV+NLVS
Sbjct: 120 EKLQVFKGDTRKQGDLDPSMFEGVTHVICCTGTTAFPSRRWDDDNTPERVDWMGVKNLVS 179

Query: 189 ALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLT 248
           ALPSS+K +VLVSS+GVTKFNELPWSIMNLFGVLKYKKMGEDF+++SG+PFTIIRAGRLT
Sbjct: 180 ALPSSVKSVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRRSGIPFTIIRAGRLT 239

Query: 249 DGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
           DGPYTSYDLNTLLKATAG+RRAVL+GQGDKL+GE SRIVVAEAC+QALD+E TE ++YE+
Sbjct: 240 DGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGETSRIVVAEACVQALDLEVTENQVYEV 299

Query: 309 NSVEGEGPGSDPQKWRELFKAA 330
           NSVEGEGPG++ +KW+ELF+AA
Sbjct: 300 NSVEGEGPGNEAKKWQELFEAA 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802876|ref|XP_002869322.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297315158|gb|EFH45581.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/305 (76%), Positives = 266/305 (87%), Gaps = 7/305 (2%)

Query: 29  PLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVA 88
           PLF+ +P T+ S F  V + +A  SSS   V A  EE V T +  S     SSSKLVLV 
Sbjct: 27  PLFT-SPLTLPSSFFLVRN-EASLSSSITPVQAFTEEAVDTSDLAS-----SSSKLVLVV 79

Query: 89  GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148
           GG+GGVGQL+VASLL RNI+SRLLLRD +KAT LFGKQDE +LQV KGDTRN +DLDP++
Sbjct: 80  GGTGGVGQLLVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSM 139

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208
           FEGVTHVIC TGTTAFPS+RW+ +NTPEKVDWEGV+NL+SALPSS+KR+VLVSSVGVTK 
Sbjct: 140 FEGVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSSVKRVVLVSSVGVTKS 199

Query: 209 NELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER 268
           NELPWSIMNLFGVLKYKKMGEDF++ SGLPFTIIR GRLTDGPYTSYDLNTLLKATAGER
Sbjct: 200 NELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGER 259

Query: 269 RAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFK 328
           RAV++GQGDKL+GEVSR+VVAEACIQALDIEFT+G+ YEINSV+G+GPGSDPQ+WRELFK
Sbjct: 260 RAVVIGQGDKLVGEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQWRELFK 319

Query: 329 AAKAK 333
           AA++K
Sbjct: 320 AAESK 324

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30689062|ref|NP_194881.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|26449707|dbj|BAC41977.1| unknown protein [Arabidopsis thaliana] gi|30725368|gb|AAP37706.1| At4g31530 [Arabidopsis thaliana] gi|332660524|gb|AEE85924.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/305 (75%), Positives = 263/305 (86%), Gaps = 7/305 (2%)

Query: 29  PLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVA 88
           PLF+   P  SS F  +  ++A  SSS   V A  EE V T +  S     SSSKLVLV 
Sbjct: 27  PLFTSPLPLPSSFF--LVRNEASLSSSITPVQAFTEEAVDTSDLAS-----SSSKLVLVV 79

Query: 89  GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148
           GG+GGVGQLVVASLL RNI+SRLLLRD +KAT LFGKQDE +LQV KGDTRN +DLDP++
Sbjct: 80  GGTGGVGQLVVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSM 139

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208
           FEGVTHVIC TGTTAFPS+RW+ +NTPEKVDWEGV+NL+SALPSS+KR+VLVSSVGVTK 
Sbjct: 140 FEGVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSSVKRVVLVSSVGVTKS 199

Query: 209 NELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER 268
           NELPWSIMNLFGVLKYKKMGEDF++ SGLPFTIIR GRLTDGPYTSYDLNTLLKATAGER
Sbjct: 200 NELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGER 259

Query: 269 RAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFK 328
           RAV++GQGD L+GEVSR+VVAEACIQALDIEFT+G+ YEINSV+G+GPGSDPQ+WRELFK
Sbjct: 260 RAVVIGQGDNLVGEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQWRELFK 319

Query: 329 AAKAK 333
           AA++K
Sbjct: 320 AAESK 324

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504448|ref|XP_003521008.1| PREDICTED: uncharacterized protein At5g02240-like [Glycine max]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/335 (68%), Positives = 276/335 (82%), Gaps = 14/335 (4%)

Query: 9   TSIPNLPFPLIKFPKHHQSLP----LFSLAPPTISSRFKTVSSSKARPSSS--TVVVHAV 62
           ++ P LP   + FP+ H S+     LF        S   +V+S ++  S      V +A+
Sbjct: 4   STTPTLP---LAFPQRHHSVSHRQVLFFAKFSNKVSLSSSVASKRSCKSKCFYAKVQNAL 60

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            EE V+T +S    D++ TP SSSKLVLV GGSGGVGQLVVASLL +NIKSRL+LR+PEK
Sbjct: 61  NEEAVETQSSELEEDTQSTP-SSSKLVLVVGGSGGVGQLVVASLLQQNIKSRLILRNPEK 119

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           AT LFG+QD+E LQV KGDTR  +DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 120 ATELFGEQDKEKLQVFKGDTRKQEDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPERV 179

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DW G++NLVSALPSS+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKKMGEDF++ SGLP
Sbjct: 180 DWVGLKNLVSALPSSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRNSGLP 239

Query: 239 FTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI 298
           FTIIR GRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKL+GE SRIVVAEAC+QALD+
Sbjct: 240 FTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACVQALDL 299

Query: 299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           E TE ++YE+NSVEGEGPG++ +KW+ELF+AA ++
Sbjct: 300 EVTENQVYEVNSVEGEGPGNEAKKWQELFEAANSR 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293332867|ref|NP_001167879.1| uncharacterized protein LOC100381586 [Zea mays] gi|223944601|gb|ACN26384.1| unknown [Zea mays] gi|413955704|gb|AFW88353.1| hypothetical protein ZEAMMB73_697631 [Zea mays]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/273 (79%), Positives = 248/273 (90%)

Query: 60  HAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119
            AVQE+  +   +       +SSKLVLV GG+GGVGQLVVASLLSRNIKSRLLLRDPEKA
Sbjct: 63  QAVQEQPARAEEAGGAGAAEASSKLVLVVGGTGGVGQLVVASLLSRNIKSRLLLRDPEKA 122

Query: 120 TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD 179
           ++LFGKQDE  LQV K DTRNP DLDP +FEGVTHVICCTGTTAFPS+RWDGDNTPE+VD
Sbjct: 123 SSLFGKQDESVLQVYKADTRNPNDLDPQMFEGVTHVICCTGTTAFPSKRWDGDNTPERVD 182

Query: 180 WEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF 239
           W+G+RNLVSALP ++KR+VLVSS+GVTK+NE+PWSIMNLFGVLKYKKMGEDFV  SG+PF
Sbjct: 183 WDGIRNLVSALPQTVKRLVLVSSIGVTKYNEIPWSIMNLFGVLKYKKMGEDFVCNSGIPF 242

Query: 240 TIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE 299
           TIIRAGRLTDGPYTSYDLNTLLKATAGERRAV++G+GDKL+GEVSR+VVAEACIQALDIE
Sbjct: 243 TIIRAGRLTDGPYTSYDLNTLLKATAGERRAVVIGKGDKLVGEVSRLVVAEACIQALDIE 302

Query: 300 FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA 332
            TEG+IYEINSV+GEGPG+DP+KW ELF++A++
Sbjct: 303 STEGQIYEINSVKGEGPGTDPEKWEELFRSARS 335

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5262764|emb|CAB45912.1| putative protein [Arabidopsis thaliana] gi|7270056|emb|CAB79871.1| putative protein [Arabidopsis thaliana]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/310 (74%), Positives = 263/310 (84%), Gaps = 12/310 (3%)

Query: 29  PLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVA 88
           PLF+   P  SS F  +  ++A  SSS   V A  EE V T +  S     SSSKLVLV 
Sbjct: 27  PLFTSPLPLPSSFF--LVRNEASLSSSITPVQAFTEEAVDTSDLAS-----SSSKLVLVV 79

Query: 89  GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148
           GG+GGVGQLVVASLL RNI+SRLLLRD +KAT LFGKQDE +LQV KGDTRN +DLDP++
Sbjct: 80  GGTGGVGQLVVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSM 139

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208
           FEGVTHVIC TGTTAFPS+RW+ +NTPEKVDWEGV+NL+SALPSS+KR+VLVSSVGVTK 
Sbjct: 140 FEGVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSSVKRVVLVSSVGVTKS 199

Query: 209 NELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIR-----AGRLTDGPYTSYDLNTLLKA 263
           NELPWSIMNLFGVLKYKKMGEDF++ SGLPFTIIR      GRLTDGPYTSYDLNTLLKA
Sbjct: 200 NELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRFRTKEPGRLTDGPYTSYDLNTLLKA 259

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKW 323
           TAGERRAV++GQGD L+GEVSR+VVAEACIQALDIEFT+G+ YEINSV+G+GPGSDPQ+W
Sbjct: 260 TAGERRAVVIGQGDNLVGEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQW 319

Query: 324 RELFKAAKAK 333
           RELFKAA++K
Sbjct: 320 RELFKAAESK 329

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.609	0.624	0.314	7.8e-16
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.543	0.715	0.283	8.2e-12
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.543	0.646	0.347	8.7e-12
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.501	0.260	0.308	1.5e-10

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 7.8e-16, P = 7.8e-16
 Identities = 76/242 (31%), Positives = 121/242 (50%)

Query:   109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT-----A 163
             +R L+R  E    + G +DE    V  GD R+   + PA+ EG+  ++  T         
Sbjct:   105 ARGLVRTKESKEKING-EDE----VFIGDIRDTASIAPAV-EGIDALVILTSAVPQMKPG 158

Query:   164 F-PSRR------WDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSI 215
             F PS+       +D    PE+VDW G +N + A  ++ +K+IVLV S+G T  N    SI
Sbjct:   159 FDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSI 218

Query:   216 MNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ 275
              N   +L +K+  E ++  SG+P+TIIRAG L D                G  R +L+G+
Sbjct:   219 GNA-NILVWKRKAEQYLADSGIPYTIIRAGGLQDKD--------------GGIRELLVGK 263

Query:   276 GDKLIGEVSRIV----VAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK 331
              D+L+   +R +    VAE C+QAL +E  + +  ++ S + EG G+  + ++ LF    
Sbjct:   264 DDELLETETRTIARADVAEVCVQALQLEEAKFKALDLAS-KPEGTGTPTKDFKALFTQVT 322

Query:   332 AK 333
              K
Sbjct:   323 TK 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 61/215 (28%), Positives = 105/215 (48%)

Query:   136 GDTRNPKDLDPAIFEGVTHVICCTGTT-----AF-PSRR------WDGDNTPEKVDWEGV 183
             GD  +   ++PA F+G+  ++  T         F P++       ++    PE+VDW G 
Sbjct:    55 GDITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 113

Query:   184 RNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
             +N + A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TII
Sbjct:   114 KNQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTII 172

Query:   243 RAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGE----VSRIVVAEACIQALDI 298
             RAG L D                G  R +L+G+ D+L+      V R  VAE CIQAL  
Sbjct:   173 RAGGLLD--------------KEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLF 218

Query:   299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
             E  + + +++ S + EG  +  + ++ LF    ++
Sbjct:   219 EEAKNKAFDLGS-KPEGTSTPTKDFKALFSQVTSR 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 74/213 (34%), Positives = 107/213 (50%)

Query:   113 LRDPEKATTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDG 171
             +RD EKA T F  +D+ +LQ+ + D T  P  L   I +    VIC TG    P   +D 
Sbjct:    77 VRDVEKAKTSF--KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFR--PG--FD- 129

Query:   172 DNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT--KFNEL--P-WSIMNLFGV-LKY 224
               TP KVD  G  NLV A     +++ VLVSS+ V      ++  P +  +NLFG+ L  
Sbjct:   130 IFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVA 189

Query:   225 KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLI-GEV 283
             K   E +++KSG+ +TI+R G L + P T    N            V+M   D L  G +
Sbjct:   190 KLQAEKYIKKSGINYTIVRPGGLKNDPPTG---N------------VVMEPEDTLYEGSI 234

Query:   284 SRIVVAEACIQALDIEFTEGEIYEINSVEGEGP 316
             SR +VAE  ++AL  E +  ++ EI +   E P
Sbjct:   235 SRDLVAEVAVEALLQEESSFKVVEIVA-RAEAP 266

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 59/191 (30%), Positives = 98/191 (51%)

Query:   124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
             G Q  E L++ + D      + PA+    + +ICC G     S +   D T P ++D+  
Sbjct:   136 GTQPVEKLEIVECDLEKKDSIQPAL-GNASVIICCIGA----SEKEISDITGPYRIDYLA 190

Query:   183 VRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFT 240
              +NLV A  S+ +   +LV+S+G  KF   P +I+NLF GVL +K+  E+ + +SGL + 
Sbjct:   191 TKNLVDAATSAKVNNFILVTSLGTNKFG-FPAAILNLFWGVLCWKRKAEEALIESGLNYA 249

Query:   241 IIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIG-EVSRIVVAE--ACIQALD 297
             I+R G + + P  +Y           E   + +   D L G +VS + VAE  AC+ A +
Sbjct:   250 IVRPGGM-ERPTDAYK----------ETHNLTLALDDTLFGGQVSNLQVAELLACM-AKN 297

Query:   298 IEFTEGEIYEI 308
              + +  +I E+
Sbjct:   298 PQLSFSKIVEV 308


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      333       296   0.00093  115 3  11 22  0.42    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  203 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.45u 0.09s 22.54t   Elapsed:  00:00:03
  Total cpu time:  22.45u 0.09s 22.54t   Elapsed:  00:00:03
  Start:  Fri May 10 16:04:13 2013   End:  Fri May 10 16:04:16 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	333
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-56
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	6e-28
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	3e-23
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	5e-21
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	5e-17
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	5e-16
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-15
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-12
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	2e-11
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-10
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	4e-09
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-08
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	1e-07
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-07
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-07
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	1e-06
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	2e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-06
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-06
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	4e-06
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	8e-06
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	1e-05
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	2e-05
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	6e-05
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	7e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	9e-05
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	1e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	2e-04
pfam05368	232	pfam05368, NmrA, NmrA-like family	3e-04
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	8e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	9e-04
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	0.001
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	0.001
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.002
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.002
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.003

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  181 bits (461), Expect = 3e-56
 Identities = 81/227 (35%), Positives = 112/227 (49%), Gaps = 28/227 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           VLV G +G VG+ VV  LL R  + R L+RDP +A     K +    +V  GD  + + L
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQA----EKLEAAGAEVVVGDLTDAESL 57

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             A  EG+  VI   G+         G    E VD++G  NL+ A   + +KR VLVSS+
Sbjct: 58  AAA-LEGIDAVISAAGSGG------KGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSI 110

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
           G  K +     +  L   L  K+  ED+++ SGL +TI+R G LTD P            
Sbjct: 111 GADKPSH---PLEALGPYLDAKRKAEDYLRASGLDYTIVRPGGLTDDP------------ 155

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS 310
            AG  R VL G G +L G +SR  VAE   +ALD     G+ +E+  
Sbjct: 156 -AGTGRVVLGGDGTRLDGPISRADVAEVLAEALDTPAAIGKTFELGG 201

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score =  107 bits (268), Expect = 6e-28
 Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 40/217 (18%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + V G +G  G+ +V  LL+R  +   L R+P KA           +   + D  +  DL
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-------APGVTPVQKDLFDLADL 53

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             A+  GV  V+   G                  D +GV++L+ A   + ++RIV+VS+ 
Sbjct: 54  AEAL-AGVDAVVDAFGARPD--------------DSDGVKHLLDAAARAGVRRIVVVSAA 98

Query: 204 GVTKFNE--LPWSIMNLFG-VLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           G+ +            LF    + K   E+ ++ SGL +TI+R G L D    +Y++ T 
Sbjct: 99  GLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGT- 157

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD 297
                                 +SR  VA A +  L+
Sbjct: 158 -------------EGDPAGESSISRADVAAALLDELE 181

Length = 182

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 96.1 bits (239), Expect = 3e-23
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 35/269 (13%)

Query: 74  SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQV 133
            +      +K V VAG +G  G+ +V  LL++    +  +RD +KA T      + +LQ+
Sbjct: 9   EEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL--PQDPSLQI 66

Query: 134 CKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-P 191
            + D T     L  AI +    VIC TG      R +D    P KVD  G  NLV A   
Sbjct: 67  VRADVTEGSDKLVEAIGDDSDAVICATGF----RRSFD-PFAPWKVDNFGTVNLVEACRK 121

Query: 192 SSLKRIVLVSSVGVT-----KFNELPWSIMNLFG-VLKYKKMGEDFVQKSGLPFTIIRAG 245
           + + R +LVSS+ V      +     +  +NLFG  L  K   E +++KSG+ +TI+R G
Sbjct: 122 AGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPG 181

Query: 246 RLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAEACIQALDIEFTEGE 304
            LT+ P T                 ++M   D L  G +SR  VAE  ++AL    +  +
Sbjct: 182 GLTNDPPTG---------------NIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYK 226

Query: 305 IYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           + EI +   + P    + +++LF + K K
Sbjct: 227 VVEIVA-RADAPK---RSYKDLFASIKQK 251

Length = 251

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 88.2 bits (219), Expect = 5e-21
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+ G +G +G+ +   LL +  +  LL+R+ ++ +    +       V +GD R+   L
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA----VVEGDLRDLDSL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A  +GV  VI   G         D  +   +VD EG RN++ A   + +K  + +SS+
Sbjct: 57  SDA-VQGVDVVIHLAGA------PRDTRD-FCEVDVEGTRNVLEAAKEAGVKHFIFISSL 108

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTD 249
           G                 L  K   E  ++++ LP+TI+R G +  
Sbjct: 109 GAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 81.5 bits (201), Expect = 5e-17
 Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 49/307 (15%)

Query: 9   TSIPNLPFP---LIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEE 65
           T+IP        + K   H Q L     +    S + +++   KA+ S +T    A  E 
Sbjct: 12  TTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDI-KAQASGATKFSSAAIE- 69

Query: 66  VVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-- 123
                 +  K        L  VAG +G VG   V  LL    + R  +R  ++A +L   
Sbjct: 70  ------AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQS 123

Query: 124 ---------GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT 174
                    G Q  E L++ + D   P  + PA+    + VICC G     S +   D T
Sbjct: 124 VKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL-GNASVVICCIGA----SEKEVFDVT 178

Query: 175 -PEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDF 231
            P ++D+   +NLV A   + +   +LV+S+G  K    P +I+NLF GVL +K+  E+ 
Sbjct: 179 GPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG-FPAAILNLFWGVLCWKRKAEEA 237

Query: 232 VQKSGLPFTIIRAG---RLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV 288
           +  SGLP+TI+R G   R TD    +++L    + T       L G      G+VS + V
Sbjct: 238 LIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDT-------LFG------GQVSNLQV 284

Query: 289 AE--ACI 293
           AE  AC+
Sbjct: 285 AELMACM 291

Length = 576

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 76.5 bits (188), Expect = 5e-16
 Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 27/226 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             +LV G +G VG  VV  LL+R  + R  +R+PE A  L G      ++V  GD R+PK
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-----VEVVLGDLRDPK 55

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
            L     +GV  V+  +G         DG +    V    V     A  + +K  V +S 
Sbjct: 56  SLVAG-AKGVDGVLLISGLL-------DGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSV 107

Query: 203 VGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK 262
           +G            +   + + K   E  ++ SG+P+T +R                   
Sbjct: 108 LGAD--------AASPSALARAKAAVEAALRSSGIPYTTLRR------AAFYLGAGAAFI 153

Query: 263 ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
             A      ++ +G   +  ++   VAEA   ALD   T G  YE+
Sbjct: 154 EAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYEL 199

Length = 275

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 40/223 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G  +V   L+R  +   L+RDP K        + E L+V +GD  + +D+
Sbjct: 2   IAIIGATGRTGSAIVREALARGHEVTALVRDPAKLP-----AEHEKLKVVQGDVLDLEDV 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A+ EG   VI   GT          D +P  +  EG RN+VSA+  + +KR+++V   
Sbjct: 57  KEAL-EGQDAVISALGT--------RNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 204 G----------VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYT 253
           G          V      P     L  V +        +++SGL +T +R   L DG  T
Sbjct: 108 GSLDDRPKVTLVLDTLLFP---PALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGGAT 164

Query: 254 SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL 296
                       G    V +    K    +SR  +A   +  L
Sbjct: 165 ------------GGYYRVELLVDAKGGSRISRADLAIFMLDEL 195

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 34/224 (15%)

Query: 86  LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD 145
           LV G +G +G  VV  LL++      L+R+PEKA         + ++V +GD  +P+ L+
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFA----ADGVEVRQGDYDDPETLE 57

Query: 146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVG 204
            A FEGV  ++  + +          D   +       +N + A   + +K IV +S+ G
Sbjct: 58  RA-FEGVDRLLLISPSDLE-------DRIQQ------HKNFIDAAKQAGVKHIVYLSASG 103

Query: 205 VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT 264
             + +    +  +           E +++ SG+P+TI+R G   D     +        +
Sbjct: 104 ADEDSPFLLARDHG--------ATEKYLEASGIPYTILRPGWFMD-NLLEFL------PS 148

Query: 265 AGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
             E   +    GD  +  V R  +AEA   AL     EG++Y +
Sbjct: 149 ILEEGTIYGPAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNL 192

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 26/223 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V   L    + R L+R+  KA+ L     E   ++  GD   P+ L
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KEWGAELVYGDLSLPETL 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
            P+ F+GVT +I    T+     R       +++DW+G   L+ +A  + +KR +  S +
Sbjct: 59  PPS-FKGVTAIID-ASTS-----RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
              ++  +P  +M L    K     E  ++KSG+P+TI R      G  + Y +  L   
Sbjct: 112 NAEQYPYIP--LMKL----KSDI--EQKLKKSGIPYTIFRLAGFFQGLISQYAIPIL--- 160

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIY 306
              E++ + +      I  +     A+ C+++L +  T+ + +
Sbjct: 161 ---EKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTF 200

Length = 317

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 60/272 (22%), Positives = 98/272 (36%), Gaps = 38/272 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             +LV GG+G +G  +V  LL+     R L R  +             ++    D  +  
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL-----DPLLSGVEFVVLDLTDRD 55

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRNLV-SALPSSLKRI 197
            +D         VI      A  S   D + +      +    G  NL+ +A  + +KR 
Sbjct: 56  LVDELAKGVPDAVIHL----AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRF 111

Query: 198 VLVSSVGV-------TKFNE--LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTIIRAG- 245
           V  SSV V          +E   P   +N +GV K    ++   + +  GLP  I+R   
Sbjct: 112 VFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFN 171

Query: 246 ----RLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT 301
                      +      + +   GE   V+ G G +    V    VA+A + AL+    
Sbjct: 172 VYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP-- 229

Query: 302 EGEIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           +G ++ I S      G+     REL +A    
Sbjct: 230 DGGVFNIGS------GTAEITVRELAEAVAEA 255

Length = 314

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 27/232 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
            +V V G +G +G+ VV  L  R  +  +  R    A  L    D   +   + D R+ +
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDN-TPEKVDWEGVRNLVS-ALPSSLKRIVLV 200
            +  A+ EG   VI   G      R ++  N + E V  EG   L   A  + ++R++ +
Sbjct: 61  SIRKAL-EGSDVVINLVG------RLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRA----GRLTDGPYTSYD 256
           S++G    +   +        L+ K  GE+ V+++    TI+R     GR          
Sbjct: 114 SALGADANSPSKY--------LRSKAEGEEAVREAFPEATIVRPSVVFGRE------DRF 159

Query: 257 LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
           LN   K  A      L+G G      V    VAEA  +AL    TEG+ YE+
Sbjct: 160 LNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYEL 211

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 38/190 (20%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT----TLFGKQDEETLQVCKGD-T 138
           LVLV G +G +   +V  LL    K R  +R   K+      L      + L+    D  
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP--S 192
             P   D A+ +GV +VI       F           E        EG  N++ A     
Sbjct: 61  TAPNAWDEAL-KGVDYVIHVASPFPFT------GPDAEDDVIDPAVEGTLNVLEAAKAAG 113

Query: 193 SLKRIVLVSSV----GVTK------FNELPWSIMNLF---GVLKY---KKMGE----DFV 232
           S+KR+VL SSV      T       F E  W+ + +    G+  Y   K + E    +FV
Sbjct: 114 SVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFV 173

Query: 233 QKSGLPFTII 242
           +++   F +I
Sbjct: 174 KENKPKFELI 183

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 28/177 (15%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             VLV G +G VG  VV  LL +  + R+L+R       L G   E    + +GD R+P 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVE----IVEGDLRDPA 56

Query: 143 DLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLV-SALPSSLKRIV 198
            L  A+     + HV       A   R W  D       + EG RNL+ +AL + ++R+V
Sbjct: 57  SLRKAVAGCRALFHV-------AADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVV 109

Query: 199 LVSSVGVTKFNE--------LPWSIMNLFGVLKYKK-MGE----DFVQKSGLPFTII 242
             SSV                P S+ ++ G  K  K + E    +   + GLP  I+
Sbjct: 110 YTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIV 166

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G  +V +LL++  + R L+R    A  L G      ++V +GD  +   L
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG----LPVEVVEGDLTDAASL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLV-SALPSSLKRIVLVSS 202
             A  +G   V      T+     W  D     + + EG RN++ +AL + ++R+V  SS
Sbjct: 57  AAA-MKGCDRVFHLAAFTSL----WAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 203 VGV------TKFNE-LPWSIMNLFGV-LKYKKMGEDFV---QKSGLPFTIIRAGRLTDGP 251
           +         + +E  PW+         + K + E  V      GL   I+    +  GP
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVF-GP 170

Query: 252 Y 252
            
Sbjct: 171 G 171

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 59/282 (20%), Positives = 95/282 (33%), Gaps = 53/282 (18%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ----VCKGDTRN 140
           V V GG+G +G+ +V  LL    K  +L+R           ++         V +GD   
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 141 PK-DLDPAIF----EGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP 191
           P   L  A        V HVI C  +  F          P +  W    +G  +++    
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCAASYDF--------QAPNEDAWRTNIDGTEHVLELAA 112

Query: 192 SS-LKRIVLVSSVGVT-----KFNELPWSIMNLF--GVLKYKKMGEDFVQKSG--LPFTI 241
              ++R   VS+  V         E   +    F     + K   E  V+ +   +P T+
Sbjct: 113 RLDIQRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPLTV 172

Query: 242 IR---------AGRLT--DGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGE-VSRIVVA 289
            R          GR+   DG Y       LL   A   R + M          V    VA
Sbjct: 173 YRPSIVVGDSKTGRIEKIDGLY------ELLNLLAKLGRWLPMPGNKGARLNLVPVDYVA 226

Query: 290 EACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK 331
           +A +         G+I+ +   +        ++  +LFK+A 
Sbjct: 227 DAIVYLSKKPEANGQIFHL--TDPTPQ--TLREIADLFKSAF 264

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 43/164 (26%), Positives = 61/164 (37%), Gaps = 22/164 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSR--LLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           K  LV G +G VG+ ++  LL     S+   ++R          K     L     D   
Sbjct: 1   KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVRRKLTFPEAKEK-----LVQIVVDFER 55

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLVS-ALPSSLKRIV 198
             +   A F+      CC GTT    R+  G      KVD + V  L   A  + ++  +
Sbjct: 56  LDEYLEA-FQNPDVGFCCLGTT----RKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFL 110

Query: 199 LVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           LVSS+G            + F  LK K   E  +QK G     I
Sbjct: 111 LVSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTI 146

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 32/199 (16%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP 141
           K VL+ G +G + +     LL   N++  L LR+  +   L   +    + V +GD  N 
Sbjct: 1   KKVLILGANGEIAREATTMLLENSNVELTLFLRNAHRLLHLKSAR----VTVVEGDALNS 56

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV 200
            DL  A+  G   V    G T    +                 N+V A+ +  +KR++  
Sbjct: 57  DDLKAAM-RGQDVVYANLGGTDLDQQ---------------AENVVQAMKAVGVKRLIWT 100

Query: 201 SSVGVTKFNELP-----WSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY 255
           +S+G+  ++E+P     W+   +   L   +     ++ S L +T++R   LT+     Y
Sbjct: 101 TSLGI--YDEVPGKFGEWNKEFIGNYLAPYRKSAAVIENSDLDYTLLRPAWLTNNDEIDY 158

Query: 256 DL---NTLLKATAGERRAV 271
           +L       K T   R++V
Sbjct: 159 ELTPKGEAFKGTEVSRKSV 177

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 23/147 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT------LFGKQDEETLQVCKGDT 138
           V V G SG +G  +V  LL R    R  +RDP           L G   +E L++ K D 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEG--AKERLKLFKADL 58

Query: 139 RNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE--GVRNLVSA--LPS 192
            +    D AI   +GV H        A P      D   E ++    G  N++ A     
Sbjct: 59  LDYGSFDAAIDGCDGVFH-------VASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAK 111

Query: 193 SLKRIVLVSSVG--VTKFNELPWSIMN 217
           S+KR+V  SSV   V   N     +++
Sbjct: 112 SVKRVVFTSSVAAVVWNPNRGEGKVVD 138

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 54/272 (19%), Positives = 93/272 (34%), Gaps = 63/272 (23%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+ GG+  +G+ +V  LL+      +  R   K         E    +  GD  +   L
Sbjct: 3   ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDL-----PEGVEHI-VGDRNDRDAL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG 204
           +  +      V+    T A+         TP +V        + A    +K+ + +SS  
Sbjct: 57  EELLGGEDFDVVV--DTIAY---------TPRQV-----ERALDAFKGRVKQYIFISSAS 100

Query: 205 VTKFNELPW---------SIMNLFGVLKY---KKMGEDFVQKS-GLPFTIIRAGRLTDGP 251
           V                   + L     Y   K+  ED + ++   P+TI+R      GP
Sbjct: 101 VYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPP-YIYGP 159

Query: 252 YT-SYDLNTLLKATAGERRAVLMGQGDKLI--GEVSRIV-------VAEACIQALDIEFT 301
              +  L         +R    + +G  ++  G+   +V       +A A + A      
Sbjct: 160 GDYTGRLAYFF-----DR----LARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKA 210

Query: 302 EGEIYEINSVEGEGPGSDPQKWRELFKA-AKA 332
            G I+ I   E          W EL +A AKA
Sbjct: 211 IGGIFNITGDE-------AVTWDELLEACAKA 235

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 26/165 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNP 141
           +LV G +G  G  VV +LL     K R L RDP    A  L     E    V +GD  +P
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVE----VVQGDLDDP 56

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS 201
           + L+ A  +GV  V   T         W+     E    +G   + +A  + ++  V  S
Sbjct: 57  ESLEAA-LKGVYGVFLVTDF-------WEAGGEDE--IAQGKNVVDAAKRAGVQHFVF-S 105

Query: 202 SVG-VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAG 245
           SV  V K         +   V       E++++ SGLP TI+R  
Sbjct: 106 SVPDVEKLTLAVPHFDSKAEV-------EEYIRASGLPATILRPA 143

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 46.5 bits (110), Expect = 8e-06
 Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 16/136 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEET-LQVCKGDTRN 140
           VLV G SG V   VV  LL R  K R  +RDP   +K   L     +   L++   D  +
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 141 PKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALPS--SLK 195
            +  D  I    GV HV       A P      D N   K    G  N + A  +  S+K
Sbjct: 61  EQSFDEVIKGCAGVFHV-------ATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVK 113

Query: 196 RIVLVSSVGVTKFNEL 211
           R VL SS G     + 
Sbjct: 114 RFVLTSSAGSVLIPKP 129

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 30/229 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           + V G +G  G  V+  LL++   + R ++R+ EKA TL  +  E    V +GD   P+ 
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLADQGVE----VRQGDYNQPEL 56

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
           L  A F G + +   TG           DNT E    + V +   A  + +K I      
Sbjct: 57  LQKA-FAGASKLFIITGPHY--------DNTLEIKQGKNVADA--ARRAGVKHIY----S 101

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
               F E     + L  V   K   E  ++ +G+P+T +R G      YT   ++  L A
Sbjct: 102 TGYAFAEES--AIPLAHV---KLAVEYAIRTTGIPYTFLRNGL-----YTENFVSEGLPA 151

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVE 312
                 A+++  GD  +  V+R  +  A  Q L  E  EG+   + S  
Sbjct: 152 ADTGSGAIVLPAGDGPVPSVTRNDLGPAAAQLLKEEGHEGKTINLVSNC 200

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS-------RLLLRDPEKATTLFGKQDEETLQVCKGD 137
            LV GGSG +G+ +V  LL R   +            DP              +Q   GD
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDP---------SSSGRVQFHTGD 52

Query: 138 TRNPKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLK 195
             +P+DL+ A   +G   V      TA P      D+   KV+ +G RN++ A     +K
Sbjct: 53  LTDPQDLEKAFNEKGPNVVF----HTASPDHG-SNDDLYYKVNVQGTRNVIEACRKCGVK 107

Query: 196 RIVLVSSVGV 205
           ++V  SS  V
Sbjct: 108 KLVYTSSASV 117

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 55/251 (21%), Positives = 90/251 (35%), Gaps = 46/251 (18%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV GG+G +G  +V  LL    +  +L R     +   G+         +GD  +P  L
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR-----FHEGDLTDPDAL 55

Query: 145 DPAIFEGV--THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
           +  +   V    VI     +      ++      + +  G   L+ A   + +KR V  S
Sbjct: 56  E-RLLAEVQPDAVIHLAAQSGVG-ASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS 113

Query: 202 SVGV------TKFNEL-------PWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLT 248
           S  V          E        P++   L       ++ E + +  GL   I+R   + 
Sbjct: 114 SSEVYGDVADPPITEDTPLGPLSPYAAAKLAAE----RLVEAYARAYGLRAVILRLFNVY 169

Query: 249 DGPYTSYDLNT------LLKATAGERRAVLMGQGDKLIGEVSR----IV-VAEACIQALD 297
            GP       T      + +   G+   +L   GD   G   R    +  VA A + AL+
Sbjct: 170 -GPGNPDPFVTHVIPALIRRILEGKPILLL---GD---GTQRRDFLYVDDVARAILLALE 222

Query: 298 IEFTEGEIYEI 308
                GEIY I
Sbjct: 223 -HPDGGEIYNI 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 23/163 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRN-IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV GGSG  G+ +V  LL R     R   +  P +A + +   +   ++  KGD  +  
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN---IEFLKGDITDRN 58

Query: 143 DLDPAIFEGVTHVICCT--GTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVL 199
           D++ A+  G   V         A P   +       +V+  G +N++ A     +++ V 
Sbjct: 59  DVEQAL-SGADCVFHTAAIVPLAGPRDLYW------EVNVGGTQNVLDACQRCGVQKFVY 111

Query: 200 VSSVGV--------TKFNELPWSIMNLFGVLKYKKMGEDFVQK 234
            SS  V             LP+  ++     + K + E  V +
Sbjct: 112 TSSSSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLE 154

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 43.7 bits (103), Expect = 7e-05
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 87  VAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLD 145
           V G +G +G  +V  LL R       LRDP K+  L  K  E + L++ + D +     D
Sbjct: 15  VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74

Query: 146 PAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD-------WEGVRNLV-SALPS-SL 194
            A+   +GV HV     +  F     D +N  E V         +G  N++ S L S ++
Sbjct: 75  EAVKGCDGVFHV---AASMEF-DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTV 130

Query: 195 KRIVLVSSV 203
           KR+V  SS+
Sbjct: 131 KRVVFTSSI 139

Length = 353

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           + +AG +G +G  +V++LL+       +L R    ++  F       ++V   D  + + 
Sbjct: 2   IAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEF---QPSGVKVVPVDYASHES 58

Query: 144 LDPAIFEGVTHVICCTGTTAFPS 166
           L  A  +GV  VI   G  A   
Sbjct: 59  LV-AALKGVDAVISALGGAAIGD 80

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 86  LVAGGSGGVGQLVVASLLSRNIKS--RLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           LV GG G +G+ +V  LL        R+  LR   +    F K   + +   +GD  + +
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKL--QVITYIEGDVTDKQ 58

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVLVS 201
           DL  A+ +G   VI                +T  KV+ +G +N++ A + + ++ +V  S
Sbjct: 59  DLRRAL-QGSDVVIHTAA--IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

Query: 202 SVGV 205
           S+ V
Sbjct: 116 SMEV 119

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 25  HQSLPLFSL--APPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSS 82
           H S  LFSL  A    SS    +++S            +          + S  +     
Sbjct: 1   HLSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKD 60

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE----ETLQVCKGDT 138
             VLV G +G +G+ VV  L+ R      + R+        GK+D        +V  GD 
Sbjct: 61  VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDV 120

Query: 139 RNPKDLDPAIFE---GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRN-LVSALPSSL 194
            +   L   +F     V  V+ C       + R  G     K+D++  +N L +      
Sbjct: 121 TDADSLRKVLFSEGDPVDVVVSCL------ASRTGGVKDSWKIDYQATKNSLDAGREVGA 174

Query: 195 KRIVLVSSVGVTK 207
           K  VL+S++ V K
Sbjct: 175 KHFVLLSAICVQK 187

Length = 390

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 26/165 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKD 143
           +LV G +G  G  VV + L      R L+RDP+            E ++   GD  + + 
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVE---GDLDDHES 57

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL---KRIVLV 200
           L  A  +GV  V   TG         DG    +     GV++ +   PS           
Sbjct: 58  LVEA-LKGVDVVFSVTGFWLSKEIE-DGKKLADAAKEAGVKHFI---PSEFGNDVDRSNG 112

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAG 245
               V  F+             K +   E +++  G+P+T + AG
Sbjct: 113 VEPAVPHFDS------------KAEV--ERYIRALGIPYTFVYAG 143

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 21/144 (14%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVC 134
             K+V V G SG +   +V  LL R    +  +RDP      E    L G +  E L + 
Sbjct: 3   EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAK--ERLHLF 60

Query: 135 KGDTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVS-- 188
           K +       D  +   EGV H       TA P      D   E +D   +G  N++   
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFH-------TASPFYHDVTDPQAELIDPAVKGTLNVLRSC 113

Query: 189 ALPSSLKRIVLVSSVGVTKFNELP 212
           A   S+KR+V+ SS+    +N  P
Sbjct: 114 AKVPSVKRVVVTSSMAAVAYNGKP 137

Length = 322

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 37/231 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G  V  +LL      R L+R  E+A  L  +  E    V  GD  +P  L
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAE----VVVGDLDDPAVL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW--EGVRNLVSALPSS-LKRIVLVS 201
             A   GV  V                  T +      +      SAL  + +KR+V +S
Sbjct: 57  AAA-LAGVDAVFFLA----------PPAPTADARPGYVQAAEAFASALREAGVKRVVNLS 105

Query: 202 SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL 261
           SVG    +    S +     L  + +       +GLP   +R     +        N L 
Sbjct: 106 SVGA---DPESPSGLIRGHWLMEQVLNW-----AGLPVVHLRPAWFME--------NLLS 149

Query: 262 KATAGERRAVLMG--QGDKLIGEVSRIVVAEACIQAL-DIEFTEGEIYEIN 309
           +A +  +  VL     GD  +  ++   +A    + L D E+    +YE+ 
Sbjct: 150 QAPSIRKAGVLALPFPGDGRLPPIATDDIARVAAKLLLDPEWHGHRVYELT 200

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 90  GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD-PAI 148
           G G +GQ +   LL++  +     R PEK                        DL  P +
Sbjct: 5   GCGYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAA----------DLTQPGL 54

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGV 205
              V H++        P                G+R L+ AL    +++R++ +SS GV
Sbjct: 55  LADVDHLVISLP----PPAGSYRGGYDP-----GLRALLDALAQLPAVQRVIYLSSTGV 104

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
             V G SG +G+ V   L  R    RL+ R   K   L        +++   D  +   +
Sbjct: 2   AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWL------PGVEIVAADAMDASSV 55

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
             A   G   +  C         RW+    P       + N+V+A  ++  ++VL  +V
Sbjct: 56  IAAA-RGADVIYHCANP---AYTRWEELFPPL------MENVVAAAEANGAKLVLPGNV 104

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDT 138
            K   V GG+G +  L++  LL +       +RDPE   K   L   Q+   L++   D 
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADL 68

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL--PSSLKR 196
            + +  + A   G   V        F S   D +N   K   +GV N++ A     S+KR
Sbjct: 69  TDEESFE-APIAGCDLVFHVATPVNFASE--DPENDMIKPAIQGVHNVLKACAKAKSVKR 125

Query: 197 IVLVSSVGVTKFNEL 211
           ++L SS      N+L
Sbjct: 126 VILTSSAAAVSINKL 140

Length = 338

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 34/155 (21%), Positives = 46/155 (29%), Gaps = 22/155 (14%)

Query: 67  VQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFG 124
                 +    P       L+ GG GG+G LV   L +R  +  L+L  R          
Sbjct: 135 APAAALELAAAPGGLDGTYLITGGLGGLGLLVARWLAARGAR-HLVLLSRRGPAPRAAAR 193

Query: 125 KQDEE----TLQVCKGDTRNPKDLDPAIFE-----GVTHVICCTGTTAFPSRRWDGDNTP 175
                     + V + D  +P  L   + E      +  VI   G           + TP
Sbjct: 194 AALLRAGGARVSVVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLA---ELTP 250

Query: 176 EKVD------WEGVRNLVSALP-SSLKRIVLVSSV 203
                       G  NL    P   L   VL SSV
Sbjct: 251 AAFAAVLAAKVAGALNLHELTPDLPLDFFVLFSSV 285

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +++ GG+G +G+ +   L +   +  +L R P KA    G  +  T             L
Sbjct: 2   IVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAE---GLAEVITWD--------GLSL 50

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVSALPSSLKR-IVLVS 201
            P    G   VI   G      RRW   N  E +    E  R LV A+ ++     VL+S
Sbjct: 51  GPWELPGADAVINLAGEPIA-CRRWTEANKKEILSSRIESTRVLVEAIANAPAPPKVLIS 109

Query: 202 SVGVT 206
           +  V 
Sbjct: 110 ASAVG 114

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	333
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
CHL00194	317	ycf39 Ycf39; Provisional	99.98
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.98
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PLN02206	442	UDP-glucuronate decarboxylase	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.96
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.96
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
PLN00016	378	RNA-binding protein; Provisional	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN03209	576	translocon at the inner envelope of chloroplast su	99.96
PLN02686	367	cinnamoyl-CoA reductase	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.95
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.95
PLN02583	297	cinnamoyl-CoA reductase	99.95
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.95
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
PRK07201	657	short chain dehydrogenase; Provisional	99.95
PRK05865	854	hypothetical protein; Provisional	99.94
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.94
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.93
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.93
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.93
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.92
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.92
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.92
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PLN02778	298	3,5-epimerase/4-reductase	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.91
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.9
PRK07074	257	short chain dehydrogenase; Provisional	99.9
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.9
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK12320	699	hypothetical protein; Provisional	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK06128	300	oxidoreductase; Provisional	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.9
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK08339	263	short chain dehydrogenase; Provisional	99.9
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.89
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08265	261	short chain dehydrogenase; Provisional	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK06182	273	short chain dehydrogenase; Validated	99.89
PRK06701	290	short chain dehydrogenase; Provisional	99.89
PRK07063	260	short chain dehydrogenase; Provisional	99.89
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.89
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.89
PRK06180	277	short chain dehydrogenase; Provisional	99.89
PRK07890	258	short chain dehydrogenase; Provisional	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06841	255	short chain dehydrogenase; Provisional	99.88
PRK07478	254	short chain dehydrogenase; Provisional	99.88
PRK12746	254	short chain dehydrogenase; Provisional	99.88
PRK06138	252	short chain dehydrogenase; Provisional	99.88
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK05867	253	short chain dehydrogenase; Provisional	99.88
PLN02253	280	xanthoxin dehydrogenase	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07775	274	short chain dehydrogenase; Provisional	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.88
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.88
PRK07825	273	short chain dehydrogenase; Provisional	99.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.88
PRK06523	260	short chain dehydrogenase; Provisional	99.88
PRK09135	249	pteridine reductase; Provisional	99.88
PRK07060	245	short chain dehydrogenase; Provisional	99.88
PRK08589	272	short chain dehydrogenase; Validated	99.88
PRK12939	250	short chain dehydrogenase; Provisional	99.88
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06398	258	aldose dehydrogenase; Validated	99.88
PRK07774	250	short chain dehydrogenase; Provisional	99.88
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.87
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.87
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.87
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.87
PRK07985	294	oxidoreductase; Provisional	99.87
PRK08643	256	acetoin reductase; Validated	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.87
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.87
PRK12747	252	short chain dehydrogenase; Provisional	99.87
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.87
PRK05993	277	short chain dehydrogenase; Provisional	99.87
PRK06114	254	short chain dehydrogenase; Provisional	99.87
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.87
PRK07856	252	short chain dehydrogenase; Provisional	99.87
PRK06139	330	short chain dehydrogenase; Provisional	99.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09291	257	short chain dehydrogenase; Provisional	99.86
PRK10538	248	malonic semialdehyde reductase; Provisional	99.86
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.86
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.86
PRK05717	255	oxidoreductase; Validated	99.86
PRK06172	253	short chain dehydrogenase; Provisional	99.86
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.86
PRK08628	258	short chain dehydrogenase; Provisional	99.86
PRK07035	252	short chain dehydrogenase; Provisional	99.86
PRK06500	249	short chain dehydrogenase; Provisional	99.86
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09134	258	short chain dehydrogenase; Provisional	99.86
PRK06179	270	short chain dehydrogenase; Provisional	99.86
PRK07062	265	short chain dehydrogenase; Provisional	99.86
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.86
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06181	263	short chain dehydrogenase; Provisional	99.86
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK09242	257	tropinone reductase; Provisional	99.86
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.86
PRK07326	237	short chain dehydrogenase; Provisional	99.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.86
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07024	257	short chain dehydrogenase; Provisional	99.85
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.85
PRK12743	256	oxidoreductase; Provisional	99.85
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.85
PRK12742	237	oxidoreductase; Provisional	99.85
PRK07454	241	short chain dehydrogenase; Provisional	99.85
PRK07109	334	short chain dehydrogenase; Provisional	99.85
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.85
PRK07576	264	short chain dehydrogenase; Provisional	99.85
PRK05866	293	short chain dehydrogenase; Provisional	99.85
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK08324	681	short chain dehydrogenase; Validated	99.85
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.85
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06194	287	hypothetical protein; Provisional	99.85
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK06196	315	oxidoreductase; Provisional	99.85
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.85
PRK07814	263	short chain dehydrogenase; Provisional	99.85
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK12937	245	short chain dehydrogenase; Provisional	99.85
PRK06483	236	dihydromonapterin reductase; Provisional	99.85
PRK07791	286	short chain dehydrogenase; Provisional	99.85
PRK08219	227	short chain dehydrogenase; Provisional	99.85
PRK07677	252	short chain dehydrogenase; Provisional	99.85
PRK06057	255	short chain dehydrogenase; Provisional	99.84
PRK06949	258	short chain dehydrogenase; Provisional	99.84
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.84
PRK06125	259	short chain dehydrogenase; Provisional	99.84
PRK05872	296	short chain dehydrogenase; Provisional	99.84
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK07904	253	short chain dehydrogenase; Provisional	99.84
PRK06484	520	short chain dehydrogenase; Validated	99.84
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK07577	234	short chain dehydrogenase; Provisional	99.84
PRK05650	270	short chain dehydrogenase; Provisional	99.84
PRK06123	248	short chain dehydrogenase; Provisional	99.84
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK08226	263	short chain dehydrogenase; Provisional	99.84
PRK07831	262	short chain dehydrogenase; Provisional	99.84
PRK08267	260	short chain dehydrogenase; Provisional	99.84
PRK07069	251	short chain dehydrogenase; Validated	99.83
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.83
PRK06101	240	short chain dehydrogenase; Provisional	99.83
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.83
PRK05693	274	short chain dehydrogenase; Provisional	99.83
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
PRK06940	275	short chain dehydrogenase; Provisional	99.83
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.83
PRK07102	243	short chain dehydrogenase; Provisional	99.83
PRK05884	223	short chain dehydrogenase; Provisional	99.83
PRK06197	306	short chain dehydrogenase; Provisional	99.82
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK07041	230	short chain dehydrogenase; Provisional	99.82
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.82
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.82
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.82
PRK06198	260	short chain dehydrogenase; Provisional	99.82
KOG0725	270	consensus Reductases with broad range of substrate	99.82
PRK08264	238	short chain dehydrogenase; Validated	99.82
PRK12744	257	short chain dehydrogenase; Provisional	99.82
PLN02260	668	probable rhamnose biosynthetic enzyme	99.81
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.81
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.81
PRK08278	273	short chain dehydrogenase; Provisional	99.81
PRK09072	263	short chain dehydrogenase; Provisional	99.81
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.81
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.81
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.81
PRK06924	251	short chain dehydrogenase; Provisional	99.81
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.81
PRK08303	305	short chain dehydrogenase; Provisional	99.8
PRK08251	248	short chain dehydrogenase; Provisional	99.8
PRK06484	520	short chain dehydrogenase; Validated	99.8
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.8
PRK08703	239	short chain dehydrogenase; Provisional	99.8
PRK12367	245	short chain dehydrogenase; Provisional	99.8
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK07832	272	short chain dehydrogenase; Provisional	99.79
PRK07578	199	short chain dehydrogenase; Provisional	99.79
PLN02780	320	ketoreductase/ oxidoreductase	99.79
PRK05855	582	short chain dehydrogenase; Validated	99.78
PRK07201	657	short chain dehydrogenase; Provisional	99.78
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.78
PRK05854	313	short chain dehydrogenase; Provisional	99.78
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.78
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.78
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK05599	246	hypothetical protein; Provisional	99.77
COG2910	211	Putative NADH-flavin reductase [General function p	99.77
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.76
PLN00015	308	protochlorophyllide reductase	99.76
PRK08862	227	short chain dehydrogenase; Provisional	99.76
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.75
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.75
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.75
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.74
PRK06953	222	short chain dehydrogenase; Provisional	99.74
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.74
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.74
PRK08177	225	short chain dehydrogenase; Provisional	99.74
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.71
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.69
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.67
KOG1208	314	consensus Dehydrogenases with different specificit	99.67
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.67
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.63
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.62
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.6
COG1028	251	FabG Dehydrogenases with different specificities (	99.6
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.59
KOG2774	366	consensus NAD dependent epimerase [General functio	99.59
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.59
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.58
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.55
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.54
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.51
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.42
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.39
PRK06720	169	hypothetical protein; Provisional	99.37
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.31
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.26
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.21
PRK08309	177	short chain dehydrogenase; Provisional	99.2
PTZ00325	321	malate dehydrogenase; Provisional	99.07
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.05
PLN00106	323	malate dehydrogenase	98.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.86
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.78
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.65
PRK09620	229	hypothetical protein; Provisional	98.6
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.57
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.52
PRK05086	312	malate dehydrogenase; Provisional	98.46
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.45
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.37
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.37
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.37
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.31
PRK14982	340	acyl-ACP reductase; Provisional	98.29
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.25
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.17
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.16
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.11
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.07
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.05
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.94
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.87
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.79
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.78
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.78
COG3268	382	Uncharacterized conserved protein [Function unknow	97.75
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.74
PRK09496	453	trkA potassium transporter peripheral membrane com	97.7
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.62
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.6
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.57
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.57
PRK09496	453	trkA potassium transporter peripheral membrane com	97.54
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.52
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.52
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.49
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.45
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.43
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.38
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.38
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.37
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.36
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.35
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.32
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.29
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.28
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.27
PRK04148	134	hypothetical protein; Provisional	97.27
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.25
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.25
PRK10669	558	putative cation:proton antiport protein; Provision	97.22
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.22
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.22
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.22
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.2
PRK05442	326	malate dehydrogenase; Provisional	97.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.18
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.16
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.15
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.14
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.14
PLN02928	347	oxidoreductase family protein	97.13
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.12
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	97.11
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.1
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.09
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.08
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.07
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.07
PTZ00117	319	malate dehydrogenase; Provisional	97.06
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.06
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.03
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.01
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.01
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.99
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.97
PLN00203	519	glutamyl-tRNA reductase	96.97
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.96
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.96
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.96
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.96
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.95
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.95
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.94
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.93
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.92
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.92
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.91
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.88
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.88
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.87
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.86
PRK07574	385	formate dehydrogenase; Provisional	96.84
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.84
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.84
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.83
PLN02602	350	lactate dehydrogenase	96.83
PRK06223	307	malate dehydrogenase; Reviewed	96.82
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.81
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.8
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.8
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.8
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.78
PRK08328	231	hypothetical protein; Provisional	96.78
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.78
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.77
PRK08655	437	prephenate dehydrogenase; Provisional	96.77
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.76
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.76
PRK08223	287	hypothetical protein; Validated	96.75
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.74
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.74
PRK13243	333	glyoxylate reductase; Reviewed	96.73
PLN03139	386	formate dehydrogenase; Provisional	96.72
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.72
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.71
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.71
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.7
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	96.7
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.69
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.69
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.68
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.68
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.66
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.66
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.65
PRK12480	330	D-lactate dehydrogenase; Provisional	96.64
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.62
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.61
PLN02383	344	aspartate semialdehyde dehydrogenase	96.6
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.6
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	96.59
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.57
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.57
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.56
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.56
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.54
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.54
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.54
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.52
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.52
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.51
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.5
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.5
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.48
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.48
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.48
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.47
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.43
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.42
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.42
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.42
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.4
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.39
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.37
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.35
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.34
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.33
PRK06436	303	glycerate dehydrogenase; Provisional	96.33
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.33
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.32
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.32
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.3
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.3
PLN02494	477	adenosylhomocysteinase	96.29
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.25
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.24
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	96.23
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.23
PRK10537	393	voltage-gated potassium channel; Provisional	96.21
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.2
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.2
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.2
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.18
PRK06487	317	glycerate dehydrogenase; Provisional	96.17
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.17
PRK07417	279	arogenate dehydrogenase; Reviewed	96.17
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.15
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.14
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.13
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.13
PLN02858	1378	fructose-bisphosphate aldolase	96.12
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.12
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.11
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.1
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.1
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.1
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.09
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.08
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.06
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.04
PLN02306	386	hydroxypyruvate reductase	96.03
PLN02740	381	Alcohol dehydrogenase-like	96.03
PRK06932	314	glycerate dehydrogenase; Provisional	96.03
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.02
PRK07340	304	ornithine cyclodeaminase; Validated	96.02
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.0

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6.9e-34  Score=261.37  Aligned_cols=242  Identities=14%  Similarity=0.101  Sum_probs=183.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----hhcc---CCCCceEEEEccCCCcCCCchhhhcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGK---QDEETLQVCKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~---~~~~~~~~v~~D~~d~~~~~~~~~~~  151 (333)
                      .+++|+||||||+||||++|+++|+++|++|++++|.......    +...   ....++.++.+|+.|.+.+. .++++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~-~~~~~   90 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQ-KACKN   90 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHH-HHhhC
Confidence            3456899999999999999999999999999999986532211    1110   01246788999999998888 88899


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k  223 (333)
                      +|+|||+|+....+. ....+...+++|+.|+.++++++++ ++++|||+||.++|+...       .+..+.+.|+.+|
T Consensus        91 ~d~ViHlAa~~~~~~-~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK  169 (348)
T PRK15181         91 VDYVLHQAALGSVPR-SLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK  169 (348)
T ss_pred             CCEEEECccccCchh-hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHH
Confidence            999999999754322 2334456789999999999998865 899999999999998421       2334556788665


Q ss_pred             HHHHHHHH----HHhcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          224 YKKMGEDF----VQKSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       224 ~k~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                        ..+|.+    .++.|++++++||+++ |||....      .++.+...+..++.+.+++++.+.++|+|++|+|++++
T Consensus       170 --~~~e~~~~~~~~~~~~~~~~lR~~~v-yGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~  246 (348)
T PRK15181        170 --YVNELYADVFARSYEFNAIGLRYFNV-FGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANL  246 (348)
T ss_pred             --HHHHHHHHHHHHHhCCCEEEEEecce-eCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHH
Confidence              444443    4456999999999965 8886421      24556655555666777889999999999999999999


Q ss_pred             HhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++....  ..+++||+++|       +..+++|+++.+.+
T Consensus       247 ~~~~~~~~~~~~~~yni~~g-------~~~s~~e~~~~i~~  280 (348)
T PRK15181        247 LSATTNDLASKNKVYNVAVG-------DRTSLNELYYLIRD  280 (348)
T ss_pred             HHHhcccccCCCCEEEecCC-------CcEeHHHHHHHHHH
Confidence            8776432  34789999986       66899999998864

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2e-32  Score=258.15  Aligned_cols=247  Identities=16%  Similarity=0.156  Sum_probs=176.9

Q ss_pred             CCCCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-----------------hhhh--ccCCCCceEEE
Q 019935           74 SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-----------------TTLF--GKQDEETLQVC  134 (333)
Q Consensus        74 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-----------------~~~~--~~~~~~~~~~v  134 (333)
                      +......++|+||||||+||||++|+++|+++|++|++++|.....                 ..+.  ......+++++
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            3334567788999999999999999999999999999987532110                 0000  00012468899


Q ss_pred             EccCCCcCCCchhhhc--CCcEEEEcCCCCCCCCCCCC--CCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEeccccccC
Q 019935          135 KGDTRNPKDLDPAIFE--GVTHVICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKF  208 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~--~~d~vi~~a~~~~~~~~~~~--~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~~~~~~  208 (333)
                      .+|++|.+.+. ++++  ++|+|||+|+....+....+  .....+++|+.|+.+++++++. +++ +||++||..+||.
T Consensus       119 ~~Dl~d~~~v~-~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~  197 (442)
T PLN02572        119 VGDICDFEFLS-EAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGT  197 (442)
T ss_pred             ECCCCCHHHHH-HHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCC
Confidence            99999999998 7777  58999999976432211111  1123467899999999998865 775 9999999999984


Q ss_pred             CC--------------------CCccchhhhHHHHHHHHHHHH----HHhcCCCEEEEEcccccCCCCCCc---------
Q 019935          209 NE--------------------LPWSIMNLFGVLKYKKMGEDF----VQKSGLPFTIIRAGRLTDGPYTSY---------  255 (333)
Q Consensus       209 ~~--------------------~~~~~~~~~~~~k~k~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~---------  255 (333)
                      ..                    .+..+.+.|+.+|.  .+|.+    .+.+|++++++||+.+ |||+...         
T Consensus       198 ~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~--a~E~l~~~~~~~~gl~~v~lR~~~v-yGp~~~~~~~~~~li~  274 (442)
T PLN02572        198 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKV--HDSHNIAFTCKAWGIRATDLNQGVV-YGVRTDETMMDEELIN  274 (442)
T ss_pred             CCCCCcccccccccccccccccCCCCCCCcchhHHH--HHHHHHHHHHHhcCCCEEEEecccc-cCCCCccccccccccc
Confidence            21                    12344567886654  34443    3556999999999955 8987432         


Q ss_pred             ----------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCC--cEEEecCCCCCCCCCCcccH
Q 019935          256 ----------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG--EIYEINSVEGEGPGSDPQKW  323 (333)
Q Consensus       256 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g--~~~~v~~g~~~~~~~~~~s~  323 (333)
                                .+..++..+..+..+.+++++++.++|+|++|+|++++.+++++...|  .+||+++        ...++
T Consensus       275 ~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs--------~~~si  346 (442)
T PLN02572        275 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT--------EQFSV  346 (442)
T ss_pred             ccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC--------CceeH
Confidence                      122333333345556678899999999999999999999998753334  5789865        45899


Q ss_pred             HHHHHHHhc
Q 019935          324 RELFKAAKA  332 (333)
Q Consensus       324 ~e~~~~i~~  332 (333)
                      +|+++.+++
T Consensus       347 ~el~~~i~~  355 (442)
T PLN02572        347 NELAKLVTK  355 (442)
T ss_pred             HHHHHHHHH
Confidence            999998864

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-32  Score=233.86  Aligned_cols=239  Identities=20%  Similarity=0.194  Sum_probs=194.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcC--cchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~--~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi  156 (333)
                      |++|||||+||||+.+++.++++.  .+|++++.-  ....+.+......++..++++|++|.+.+. +++.  .+|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~-~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVD-RLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHH-HHHHhcCCCeEE
Confidence            479999999999999999999985  446666652  122233333333679999999999999999 8887  699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccC---------CCCCccchhhhHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF---------NELPWSIMNLFGVLKYK  225 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~---------~~~~~~~~~~~~~~k~k  225 (333)
                      |.|+-.+++ .+...+..+.++|+.|+.+|++|+++ .. -||+++||..+||+         ++.|+.|.++|..+|+.
T Consensus        80 hfAAESHVD-RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAa  158 (340)
T COG1088          80 HFAAESHVD-RSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAA  158 (340)
T ss_pred             Eechhcccc-ccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhh
Confidence            999999865 56777789999999999999999976 33 49999999999983         55788999999988864


Q ss_pred             --HHHHHHHHhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          226 --KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       226 --~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                        ..+..+.+.+|+++++.|+++- |||++-.  .++.++..+..+.+++++|+|.+.++|+||+|-++++..++.....
T Consensus       159 sD~lVray~~TYglp~~ItrcSNN-YGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~  237 (340)
T COG1088         159 SDLLVRAYVRTYGLPATITRCSNN-YGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI  237 (340)
T ss_pred             HHHHHHHHHHHcCCceEEecCCCC-cCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC
Confidence              5666788889999999999976 8998742  3566666666788899999999999999999999999999998655


Q ss_pred             CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          302 EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       302 ~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                       |++|||+++       ...+--|+++.|.+
T Consensus       238 -GE~YNIgg~-------~E~~Nlevv~~i~~  260 (340)
T COG1088         238 -GETYNIGGG-------NERTNLEVVKTICE  260 (340)
T ss_pred             -CceEEeCCC-------ccchHHHHHHHHHH
Confidence             999999997       44566666666543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-32  Score=235.41  Aligned_cols=236  Identities=21%  Similarity=0.267  Sum_probs=180.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      ++||||||+||||+|.+.+|++.|++|++++.-.........   ...+.++++|+.|.+.++ +.|+  .+|+|||+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~---~~~~~f~~gDi~D~~~L~-~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL---KLQFKFYEGDLLDRALLT-AVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh---hccCceEEeccccHHHHH-HHHHhcCCCEEEECcc
Confidence            479999999999999999999999999999975433322221   111689999999999999 8886  6999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-------CCCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ...+. ++...+.++++.|+.|+.+|+++|++ ++++|||.||.++||.       ++.+..+.++||  ++|.+.|+.|
T Consensus        77 ~~~Vg-ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG--~sKlm~E~iL  153 (329)
T COG1087          77 SISVG-ESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYG--RSKLMSEEIL  153 (329)
T ss_pred             ccccc-hhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcch--hHHHHHHHHH
Confidence            87765 44566688999999999999999965 9999999999999995       445667788999  5566677777


Q ss_pred             H----hcCCCEEEEEcccccCCC----CC---Ccc---hHHHHHHhhcccc-eeecC------CCCcccccccHHHHHHH
Q 019935          233 Q----KSGLPFTIIRAGRLTDGP----YT---SYD---LNTLLKATAGERR-AVLMG------QGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       233 ~----~~gi~~~~vrpg~~~~g~----~~---~~~---~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~v~Dva~a  291 (333)
                      +    .++++++++|..++.+-.    .+   ...   ++.....+.+..+ +.++|      +|+..||+|||.|+|++
T Consensus       154 ~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~a  233 (329)
T COG1087         154 RDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADA  233 (329)
T ss_pred             HHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHH
Confidence            5    458999999987664211    11   111   3333344444443 55666      46777999999999999


Q ss_pred             HHHhccCcccCC--cEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEG--EIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g--~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+.+++.-...|  .+||+++|.+       .|..|+++.+++
T Consensus       234 H~~Al~~L~~~g~~~~~NLG~G~G-------~SV~evi~a~~~  269 (329)
T COG1087         234 HVLALKYLKEGGSNNIFNLGSGNG-------FSVLEVIEAAKK  269 (329)
T ss_pred             HHHHHHHHHhCCceeEEEccCCCc-------eeHHHHHHHHHH
Confidence            999997643233  5999999966       788888887764

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1e-32  Score=244.95  Aligned_cols=232  Identities=26%  Similarity=0.303  Sum_probs=176.9

Q ss_pred             EEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh--hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           86 LVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        86 lVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |||||+||||++|+++|+++|  ++|+++++.+....  ....   ....+++++|++|++++. ++++++|+|||+|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---~~~~~~~~~Di~d~~~l~-~a~~g~d~V~H~Aa~   76 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---SGVKEYIQGDITDPESLE-EALEGVDVVFHTAAP   76 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---ccceeEEEeccccHHHHH-HHhcCCceEEEeCcc
Confidence            699999999999999999999  79999998765432  1110   223348999999999999 999999999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-----------CCCCccchhhhHHHHHHHHHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-----------NELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-----------~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      .....  ....+.++++|+.|+.+++++|++ +++||||+||.+++++           +..+.+......|.++|..+|
T Consensus        77 ~~~~~--~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   77 VPPWG--DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAE  154 (280)
T ss_pred             ccccC--cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHH
Confidence            64211  223456899999999999998855 9999999999998764           122222223334667788888


Q ss_pred             HHHHhc---------CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC--
Q 019935          230 DFVQKS---------GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI--  298 (333)
Q Consensus       230 ~~l~~~---------gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~--  298 (333)
                      +.+.+.         .+++++|||. .+|||+.....+.+......+.....++++....+++|++|+|.+++.+++.  
T Consensus       155 ~~V~~a~~~~~~~g~~l~t~~lRP~-~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~  233 (280)
T PF01073_consen  155 KAVLEANGSELKNGGRLRTCALRPA-GIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALL  233 (280)
T ss_pred             HHHHhhcccccccccceeEEEEecc-EEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhc
Confidence            876542         2889999998 5699998766666666666555667788888899999999999999887642  


Q ss_pred             -----cccCCcEEEecCCCCCCCCCCccc-HHHHHHHHh
Q 019935          299 -----EFTEGEIYEINSVEGEGPGSDPQK-WRELFKAAK  331 (333)
Q Consensus       299 -----~~~~g~~~~v~~g~~~~~~~~~~s-~~e~~~~i~  331 (333)
                           ....|+.|+|.+++       +.. +.|++..+.
T Consensus       234 ~~~~~~~~~G~~y~itd~~-------p~~~~~~f~~~~~  265 (280)
T PF01073_consen  234 EPGKPERVAGQAYFITDGE-------PVPSFWDFMRPLW  265 (280)
T ss_pred             cccccccCCCcEEEEECCC-------ccCcHHHHHHHHH
Confidence                 23569999999974       344 667665543

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=9.5e-32  Score=236.00  Aligned_cols=235  Identities=27%  Similarity=0.349  Sum_probs=174.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .+++|+||||+||||++|++.|+.+||.|++++|+++..+.   +.+.. ...++..+.+|+.|+++++ .+++|||+||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~-~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFD-KAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHH-HHHhCCCEEE
Confidence            56899999999999999999999999999999999876332   22211 1445899999999999999 9999999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCC-----------CCCccc-------h
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN-----------ELPWSI-------M  216 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~-----------~~~~~~-------~  216 (333)
                      |.|.+..+...+  .+.+..++++.|+.|++++|+.  .|||||++||.++....           +..|++       .
T Consensus        84 H~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   84 HTASPVDFDLED--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             EeCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            999987643222  3347899999999999999854  59999999999886432           122322       2


Q ss_pred             hhhHHHHH--HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc----hHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          217 NLFGVLKY--KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       217 ~~~~~~k~--k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ..|.++|.  .+.+.++.++.|++.++|.|+ ++.||.....    ...+...+.+.....    ......++|++|||.
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~-lV~GP~l~~~l~~s~~~~l~~i~G~~~~~----~n~~~~~VdVrDVA~  236 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPG-LVFGPGLQPSLNSSLNALLKLIKGLAETY----PNFWLAFVDVRDVAL  236 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCC-ceECCCcccccchhHHHHHHHHhcccccC----CCCceeeEeHHHHHH
Confidence            34665553  344556667789999999999 5578875432    222333333322211    123345999999999


Q ss_pred             HHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          291 ACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       291 a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+++.+...| .|.+.+        ....|.|+++.+.+
T Consensus       237 AHv~a~E~~~a~G-Ryic~~--------~~~~~~ei~~~l~~  269 (327)
T KOG1502|consen  237 AHVLALEKPSAKG-RYICVG--------EVVSIKEIADILRE  269 (327)
T ss_pred             HHHHHHcCcccCc-eEEEec--------CcccHHHHHHHHHH
Confidence            9999999998765 577777        45569999998875

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.8e-31  Score=248.91  Aligned_cols=243  Identities=15%  Similarity=0.145  Sum_probs=179.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +.+.|+|||||||||||++|++.|+++ |++|++++|+.++...+....   ...+++++.+|++|.+.+. ++++++|+
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~-~~~~~~d~   89 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLE-GLIKMADL   89 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHH-HHhhcCCE
Confidence            345578999999999999999999998 599999999876654443211   1246899999999999998 88999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCC-------CCCcc-------------
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWS-------------  214 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~-------~~~~~-------------  214 (333)
                      |||+|+...... ....+...+..|+.++.++++++++..++||++||..+|+..       +.+..             
T Consensus        90 ViHlAa~~~~~~-~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         90 TINLAAICTPAD-YNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             EEEcccccChhh-hhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence            999998754211 112223456689999999999886533899999999999842       11110             


Q ss_pred             ---------chhhhHHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCCc-------------chHHHHHHhhccc
Q 019935          215 ---------IMNLFGVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSY-------------DLNTLLKATAGER  268 (333)
Q Consensus       215 ---------~~~~~~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~-------------~~~~~~~~~~~~~  268 (333)
                               +.+.|+  .+|..+|+++.    ..|++++++||+++ |||+..+             .+..+...+..+.
T Consensus       169 ~~~~~~~~~~~~~Y~--~sK~~~E~~~~~~~~~~g~~~~ilR~~~v-yGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  245 (386)
T PLN02427        169 PCIFGSIEKQRWSYA--CAKQLIERLIYAEGAENGLEFTIVRPFNW-IGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE  245 (386)
T ss_pred             ccccCCCCccccchH--HHHHHHHHHHHHHHhhcCCceEEecccce-eCCCCCccccccccccccchHHHHHHHHHhcCC
Confidence                     123455  56766777764    35999999999955 7886421             1222333444455


Q ss_pred             ceeecCCCCcccccccHHHHHHHHHHhccCcc-cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          269 RAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       269 ~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+.+++++.+.++|+|++|+|++++.+++++. ..+++||+++++      ...+++|+++.+.+
T Consensus       246 ~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~------~~~s~~el~~~i~~  304 (386)
T PLN02427        246 PLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPN------NEVTVRQLAEMMTE  304 (386)
T ss_pred             CeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCC------CCccHHHHHHHHHH
Confidence            66677888888999999999999999998764 457899999841      46899999988864

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.98  E-value=3.1e-31  Score=240.83  Aligned_cols=218  Identities=22%  Similarity=0.346  Sum_probs=169.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|+|||||||||++++++|+++|++|++++|+.++...+.    ..+++++.+|++|++++. +++.++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~-~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLP-PSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHH-HHHCCCCEEEECCCCC
Confidence            47999999999999999999999999999999876554332    357899999999999999 8999999999998642


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                            +.....+.++|+.++.+++++++. +++|||++||.++...      +..+  +.+.|..+|+++++.|+++++
T Consensus        76 ------~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------~~~~--~~~~K~~~e~~l~~~~l~~ti  141 (317)
T CHL00194         76 ------PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------PYIP--LMKLKSDIEQKLKKSGIPYTI  141 (317)
T ss_pred             ------CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc------CCCh--HHHHHHHHHHHHHHcCCCeEE
Confidence                  223345788999999999998854 8999999999765321      1122  346788899999999999999


Q ss_pred             EEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcc
Q 019935          242 IRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQ  321 (333)
Q Consensus       242 vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~  321 (333)
                      +||+.++ +..    ...+......... ..++.++..++++|++|+|++++.++.++...+++||++++       +.+
T Consensus       142 lRp~~~~-~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~-------~~~  208 (317)
T CHL00194        142 FRLAGFF-QGL----ISQYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP-------KSW  208 (317)
T ss_pred             EeecHHh-hhh----hhhhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCC-------Ccc
Confidence            9999663 321    1111111111222 33345566789999999999999999887667899999994       778


Q ss_pred             cHHHHHHHHhc
Q 019935          322 KWRELFKAAKA  332 (333)
Q Consensus       322 s~~e~~~~i~~  332 (333)
                      |++|+++.+++
T Consensus       209 s~~el~~~~~~  219 (317)
T CHL00194        209 NSSEIISLCEQ  219 (317)
T ss_pred             CHHHHHHHHHH
Confidence            99999998875

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.98  E-value=6.2e-31  Score=241.88  Aligned_cols=236  Identities=16%  Similarity=0.172  Sum_probs=175.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCC-CcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~-d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+||||||+||||++|+++|+++ |++|++++|+..+...+..   ..+++++.+|++ +.+.+. ++++++|+|||+|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~-~~~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN---HPRMHFFEGDITINKEWIE-YHVKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc---CCCeEEEeCCCCCCHHHHH-HHHcCCCEEEECcc
Confidence            68999999999999999999987 6999999997654433321   346899999998 556666 77889999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC-------C-Cc------cchhhhHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------L-PW------SIMNLFGVLKYKK  226 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~-------~-~~------~~~~~~~~~k~k~  226 (333)
                      ..... .....+...+++|+.++.++++++++..++||++||..+|+...       . +.      .+.+.|+.  +|.
T Consensus        78 ~~~~~-~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~--sK~  154 (347)
T PRK11908         78 IATPA-TYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYAC--SKQ  154 (347)
T ss_pred             cCChH-HhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHH--HHH
Confidence            75422 22344556788999999999998865237999999999987421       1 11      12335664  455


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCC----------cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTS----------YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|+++    ++.|++++++||+.+ |||...          ..+..+...+..+.....++++++.++|+|++|+|+++
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v-~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~  233 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNW-IGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDAL  233 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeee-eCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHH
Confidence            566555    457999999999955 787631          11334444444455556667788999999999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          293 IQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.+++++.  ..+++||++++      ....+++|+++.|.+
T Consensus       234 ~~~~~~~~~~~~g~~yni~~~------~~~~s~~e~~~~i~~  269 (347)
T PRK11908        234 MKIIENKDGVASGKIYNIGNP------KNNHSVRELANKMLE  269 (347)
T ss_pred             HHHHhCccccCCCCeEEeCCC------CCCcCHHHHHHHHHH
Confidence            99998753  44789999873      146899999999864

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.6e-30  Score=240.49  Aligned_cols=235  Identities=14%  Similarity=0.078  Sum_probs=174.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+|+||||||+||||+++++.|+++|++|++++|.....  +...  ....+++.+|++|.+.+. .++.++|+|||+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~~~~--~~~~~~~~~Dl~d~~~~~-~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--MSED--MFCHEFHLVDLRVMENCL-KVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--cccc--cccceEEECCCCCHHHHH-HHHhCCCEEEEccc
Confidence            567999999999999999999999999999999864321  1100  123578889999988887 77889999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------------CCccchhhhHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------------LPWSIMNLFGVLKYKK  226 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------------~~~~~~~~~~~~k~k~  226 (333)
                      ..................|+.++.+++++++. ++++|||+||..+|+...             .+..+.+.|+.+  |.
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s--K~  172 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLE--KL  172 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHH--HH
Confidence            65311111112234567899999999998855 899999999999987421             134556677755  44


Q ss_pred             HHHH----HHHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhh-cccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          227 MGED----FVQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATA-GERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       227 ~~e~----~l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|+    +.++.|++++++||+.+ |||...+.      ...+...+. ....+.+++++++.++|+|++|++++++.+
T Consensus       173 ~~E~~~~~~~~~~g~~~~ilR~~~v-yGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~  251 (370)
T PLN02695        173 ATEELCKHYTKDFGIECRIGRFHNI-YGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRL  251 (370)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEECCc-cCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHH
Confidence            4554    44557999999999955 88865321      234444333 345566778899999999999999999998


Q ss_pred             ccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          296 LDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       296 l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.+.  .+++||++++       +.++++|+++.+.+
T Consensus       252 ~~~~--~~~~~nv~~~-------~~~s~~el~~~i~~  279 (370)
T PLN02695        252 TKSD--FREPVNIGSD-------EMVSMNEMAEIALS  279 (370)
T ss_pred             Hhcc--CCCceEecCC-------CceeHHHHHHHHHH
Confidence            8764  3578999985       67899999998864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=1.2e-30  Score=240.81  Aligned_cols=240  Identities=17%  Similarity=0.193  Sum_probs=175.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi  156 (333)
                      +++|||||||||||+++++.|+++|++|++ ++|....  ...+.......+++++.+|++|.++++ ++++  ++|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELA-RVFTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHH-HHHhhcCCCEEE
Confidence            368999999999999999999999987655 4443221  111111111346788999999999988 7777  489999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC----------CCCCeEEEEeccccccCC---------CCCccchh
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP----------SSLKRIVLVSSVGVTKFN---------ELPWSIMN  217 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~----------~~~~~~v~~SS~~~~~~~---------~~~~~~~~  217 (333)
                      |+||..... ..++.....+++|+.|+.+++++++          .++++||++||.++|+..         +.+..+.+
T Consensus        80 h~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s  158 (355)
T PRK10217         80 HLAAESHVD-RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSS  158 (355)
T ss_pred             ECCcccCcc-hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCC
Confidence            999975421 2233446688999999999999873          246799999999988731         23445667


Q ss_pred             hhHHHHHH--HHHHHHHHhcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          218 LFGVLKYK--KMGEDFVQKSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       218 ~~~~~k~k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .|+.+|..  ..++.+.++.+++++++||+.+ |||...  .....++.....+..+..++++++.++|+|++|+|++++
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~  237 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNN-YGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY  237 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeee-eCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence            77865543  2233344567999999999955 888753  223444444444555667789999999999999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++.... .+++||++++       +..++.|+++.+.+
T Consensus       238 ~~~~~~~-~~~~yni~~~-------~~~s~~~~~~~i~~  268 (355)
T PRK10217        238 CVATTGK-VGETYNIGGH-------NERKNLDVVETICE  268 (355)
T ss_pred             HHHhcCC-CCCeEEeCCC-------CcccHHHHHHHHHH
Confidence            9998743 4689999996       66899999988764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=6.2e-30  Score=232.90  Aligned_cols=235  Identities=20%  Similarity=0.252  Sum_probs=167.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hcc-CCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGK-QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~-~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .+++||||||+||||++++++|+++|++|+++.|+..+.+.+   ... ....+++++.+|++|++.+. ++++++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFE-QAIEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHH-HHHhCCCEEE
Confidence            467999999999999999999999999999999987643322   111 01246889999999999998 8899999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccc--cCC----CCCc------------cch
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT--KFN----ELPW------------SIM  216 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~--~~~----~~~~------------~~~  216 (333)
                      |+|+.....  ..++....+++|+.|+.+++++++.  +++|||++||.+++  +..    ...+            .+.
T Consensus        83 h~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         83 HTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             EeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            999975321  1122234688999999999998753  68999999998764  211    0011            123


Q ss_pred             hhhHHHHHH--HHHHHHHHhcCCCEEEEEcccccCCCCCCcc---hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK--KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD---LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +.|+.+|..  ..+..+.+++|++++++||+. +|||.....   ...++.....+...  +  +...++|+|++|+|++
T Consensus       161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~-v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a  235 (322)
T PLN02986        161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGF-ICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVALA  235 (322)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCCeEEEEcccc-eeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHH
Confidence            457766542  233344456799999999995 588864321   12222222222221  2  2456799999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++++... +.||+++        ...+++|+++.|++
T Consensus       236 ~~~al~~~~~~-~~yni~~--------~~~s~~e~~~~i~~  267 (322)
T PLN02986        236 HIKALETPSAN-GRYIIDG--------PIMSVNDIIDILRE  267 (322)
T ss_pred             HHHHhcCcccC-CcEEEec--------CCCCHHHHHHHHHH
Confidence            99999987554 4899954        46899999999875

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=5.8e-30  Score=234.66  Aligned_cols=230  Identities=20%  Similarity=0.254  Sum_probs=166.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh--hhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT--LFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .++++||||||+||||++++++|+++|++|++++|+.+....  +.... ...+++++.+|++|++++. ++++++|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALK-AAIDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHH-HHHhcCCEEE
Confidence            456899999999999999999999999999999998654221  11100 1235888999999999998 8899999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEecc-ccccCCCC----Cc------------cchhh
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV-GVTKFNEL----PW------------SIMNL  218 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~-~~~~~~~~----~~------------~~~~~  218 (333)
                      |+|+...      ......+++|+.++.+++++++ .+++|||++||. ++|+....    ++            .+.+.
T Consensus        87 h~A~~~~------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         87 HTASPVT------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             EecCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence            9998642      2335578899999999999885 488999999996 46753110    11            12345


Q ss_pred             hHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcc----hHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          219 FGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       219 ~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      |+.+  |..+|+++    ++.|++++++||+.+ |||.....    +..+.....+..  ..+  ++..++|+|++|+|+
T Consensus       161 Y~~s--K~~aE~~~~~~~~~~g~~~v~lRp~~v-yGp~~~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~~i~V~Dva~  233 (342)
T PLN02214        161 YCYG--KMVAEQAAWETAKEKGVDLVVLNPVLV-LGPPLQPTINASLYHVLKYLTGSA--KTY--ANLTQAYVDVRDVAL  233 (342)
T ss_pred             HHHH--HHHHHHHHHHHHHHcCCcEEEEeCCce-ECCCCCCCCCchHHHHHHHHcCCc--ccC--CCCCcCeeEHHHHHH
Confidence            6655  55555544    456999999999955 88875321    222223333222  222  345689999999999


Q ss_pred             HHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          291 ACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       291 a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+++.+.. ++.||+++        ...+++|+++.+++
T Consensus       234 a~~~al~~~~~-~g~yn~~~--------~~~~~~el~~~i~~  266 (342)
T PLN02214        234 AHVLVYEAPSA-SGRYLLAE--------SARHRGEVVEILAK  266 (342)
T ss_pred             HHHHHHhCccc-CCcEEEec--------CCCCHHHHHHHHHH
Confidence            99999988654 45799976        34689999998875

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.7e-29  Score=237.24  Aligned_cols=232  Identities=16%  Similarity=0.142  Sum_probs=171.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..|+||||||+||||++|+++|+++|++|++++|..... ..........+++++.+|+.+.      .+.++|+|||+|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~------~~~~~D~ViHlA  192 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP------ILLEVDQIYHLA  192 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc------cccCCCEEEECc
Confidence            457899999999999999999999999999999853221 1111111134678888888653      345699999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC------------CCccchhhhHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKK  226 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~------------~~~~~~~~~~~~k~k~  226 (333)
                      +....... ..++...+++|+.|+.+++++|+. + .+||++||.++|+...            .+..+.+.|+.+  |.
T Consensus       193 a~~~~~~~-~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~S--K~  268 (436)
T PLN02166        193 CPASPVHY-KYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEG--KR  268 (436)
T ss_pred             eeccchhh-ccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHH--HH
Confidence            87542211 223456788999999999999865 5 4899999999998421            133344567755  55


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCC----cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTS----YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .+|+++    ++.+++++++||+++ ||++..    ..+..++..+..+..+.+++++++.++|+|++|+|++++.+++.
T Consensus       269 ~aE~~~~~y~~~~~l~~~ilR~~~v-YGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~  347 (436)
T PLN02166        269 TAETLAMDYHRGAGVEVRIARIFNT-YGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG  347 (436)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEEccc-cCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence            566554    456999999999955 888632    23455665566666777788889999999999999999999976


Q ss_pred             cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       299 ~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..  +.+||++++       +.+++.|+++.|++
T Consensus       348 ~~--~giyNIgs~-------~~~Si~ela~~I~~  372 (436)
T PLN02166        348 EH--VGPFNLGNP-------GEFTMLELAEVVKE  372 (436)
T ss_pred             CC--CceEEeCCC-------CcEeHHHHHHHHHH
Confidence            43  459999985       67899999999875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=7.6e-30  Score=234.79  Aligned_cols=241  Identities=17%  Similarity=0.148  Sum_probs=176.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcC--CcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~  157 (333)
                      ++|+||||||+||||+++++.|+++|++|++++|+........... ...+++++.+|++|.+++. ++++.  +|+|||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~d~vih   81 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLR-KAIAEFKPEIVFH   81 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHH-HHHhhcCCCEEEE
Confidence            4689999999999999999999999999999999765433221111 1335778999999999988 77764  699999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCC--------CCCccchhhhHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~--------~~~~~~~~~~~~~k~k~~  227 (333)
                      +|+.... .....++...+++|+.++.+++++++. + +++||++||..+|+..        +.+..+.+.|+.+|  ..
T Consensus        82 ~A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK--~~  158 (349)
T TIGR02622        82 LAAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSK--AC  158 (349)
T ss_pred             CCccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHH--HH
Confidence            9996432 223334456788999999999998854 4 7899999999888742        22334566777654  44


Q ss_pred             HHHHHHh-----------cCCCEEEEEcccccCCCCC---CcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          228 GEDFVQK-----------SGLPFTIIRAGRLTDGPYT---SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       228 ~e~~l~~-----------~gi~~~~vrpg~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +|.+++.           .|++++++||+.+ |||+.   ....+.++.....+... .++++++.++|+|++|+|++++
T Consensus       159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~v-yGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~  236 (349)
T TIGR02622       159 AELVIASYRSSFFGVANFHGIKIASARAGNV-IGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYL  236 (349)
T ss_pred             HHHHHHHHHHHhhcccccCCCcEEEEccCcc-cCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHH
Confidence            5544432           2899999999966 78863   22345566655554444 4577889999999999999999


Q ss_pred             HhccCc----ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIE----FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~----~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+++..    ...+++||+++|.+     ...+..|+++.+.+
T Consensus       237 ~~~~~~~~~~~~~~~~yni~s~~~-----~~~s~~~~~~~i~~  274 (349)
T TIGR02622       237 LLAEKLFTGQAEFAGAWNFGPRAS-----DNARVVELVVDALE  274 (349)
T ss_pred             HHHHHHhhcCccccceeeeCCCcc-----cCcCHHHHHHHHHH
Confidence            887642    12357999997532     56888888887654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=2.7e-29  Score=228.64  Aligned_cols=232  Identities=20%  Similarity=0.235  Sum_probs=164.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hhcc-CCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGK-QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~-~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .+++||||||+||||++++++|+++|++|++++|+......   +... ....+++++.+|++|++.+. .+++++|+||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFD-SVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHH-HHHcCCCEEE
Confidence            35789999999999999999999999999999998654321   1111 01247889999999999998 8899999999


Q ss_pred             EcCCCCCCCCCCCCCC-CCCcchhHHHHHHHHHhc-CC-CCCeEEEEecccc--ccCC----------CCCccc------
Q 019935          157 CCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSAL-PS-SLKRIVLVSSVGV--TKFN----------ELPWSI------  215 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~-~~-~~~~~v~~SS~~~--~~~~----------~~~~~~------  215 (333)
                      |+|+....   ....+ ...+++|+.++.++++++ +. +++|||++||.++  |+..          +.+..+      
T Consensus        82 h~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~  158 (322)
T PLN02662         82 HTASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES  158 (322)
T ss_pred             EeCCcccC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence            99987531   12222 257889999999999976 44 7899999999874  4321          111111      


Q ss_pred             hhhhHHHHHHHHHHHH----HHhcCCCEEEEEcccccCCCCCCcc---hHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKYKKMGEDF----VQKSGLPFTIIRAGRLTDGPYTSYD---LNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~k~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .+.|+.  +|..+|++    .++.|++++++||+.+ |||.....   ...+...+..+..  .+  ++..++|+|++|+
T Consensus       159 ~~~Y~~--sK~~~E~~~~~~~~~~~~~~~~lRp~~v-~Gp~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~Dv  231 (322)
T PLN02662        159 KLWYVL--SKTLAEEAAWKFAKENGIDMVTINPAMV-IGPLLQPTLNTSAEAILNLINGAQ--TF--PNASYRWVDVRDV  231 (322)
T ss_pred             cchHHH--HHHHHHHHHHHHHHHcCCcEEEEeCCcc-cCCCCCCCCCchHHHHHHHhcCCc--cC--CCCCcCeEEHHHH
Confidence            134664  45555554    4567999999999955 88864321   1222222222221  12  3457899999999


Q ss_pred             HHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          289 AEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++.++.++...+ .|++.+        ..++++|+++.+.+
T Consensus       232 a~a~~~~~~~~~~~~-~~~~~g--------~~~s~~e~~~~i~~  266 (322)
T PLN02662        232 ANAHIQAFEIPSASG-RYCLVE--------RVVHYSEVVKILHE  266 (322)
T ss_pred             HHHHHHHhcCcCcCC-cEEEeC--------CCCCHHHHHHHHHH
Confidence            999999999865444 688864        45899999999875

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=1.4e-29  Score=232.42  Aligned_cols=236  Identities=15%  Similarity=0.150  Sum_probs=171.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccC---CCCceEEEEccCCCcCCCchhhhcC--C
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEG--V  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~~--~  152 (333)
                      |+||||||+||||++|+++|+++|++|++++|+.+.     ...+....   ...+++++.+|++|.+.+. +++++  +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~-~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLR-RIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHH-HHHHhCCC
Confidence            589999999999999999999999999999997642     11111110   0246889999999999998 78874  6


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC---eEEEEeccccccC-------CCCCccchhhhHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK---RIVLVSSVGVTKF-------NELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~---~~v~~SS~~~~~~-------~~~~~~~~~~~~~  221 (333)
                      |+|||+|+...... ....+....++|+.|+.+++++++. +++   +||++||.++|+.       ++.+..+.+.|+.
T Consensus        80 d~ViH~Aa~~~~~~-~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~  158 (343)
T TIGR01472        80 TEIYNLAAQSHVKV-SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAA  158 (343)
T ss_pred             CEEEECCcccccch-hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHH
Confidence            99999999764321 1222344567799999999998854 653   8999999999984       2334456677775


Q ss_pred             HHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhccc-ceeecCCCCcccccccHHHHHHH
Q 019935          222 LKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGER-RAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       222 ~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +  |..+|.++    ++.|++++..|+.+. +||.....     +..+...+..+. ....++++++.++|+|++|+|++
T Consensus       159 s--K~~~e~~~~~~~~~~~~~~~~~~~~~~-~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a  235 (343)
T TIGR01472       159 A--KLYAHWITVNYREAYGLFAVNGILFNH-ESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA  235 (343)
T ss_pred             H--HHHHHHHHHHHHHHhCCceEEEeeccc-CCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence            5  55556555    446899888888755 66643211     222232333233 34566889999999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++.+.  ++.||+++|       ..+++.|+++.+++
T Consensus       236 ~~~~~~~~~--~~~yni~~g-------~~~s~~e~~~~i~~  267 (343)
T TIGR01472       236 MWLMLQQDK--PDDYVIATG-------ETHSVREFVEVSFE  267 (343)
T ss_pred             HHHHHhcCC--CccEEecCC-------CceeHHHHHHHHHH
Confidence            999998653  358999996       66899999998864

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.97  E-value=1.5e-29  Score=250.20  Aligned_cols=238  Identities=18%  Similarity=0.184  Sum_probs=178.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC-CchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~-~~~~~~~~~d~vi~~  158 (333)
                      .+|+||||||+||||++|+++|+++ |++|++++|.......+..   ..+++++.+|++|.+. ++ ++++++|+|||+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~---~~~~~~~~gDl~d~~~~l~-~~l~~~D~ViHl  389 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG---HPRFHFVEGDISIHSEWIE-YHIKKCDVVLPL  389 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC---CCceEEEeccccCcHHHHH-HHhcCCCEEEEC
Confidence            4678999999999999999999986 7999999997754433321   3478999999999765 45 678899999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC-CCc-------------cchhhhHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-LPW-------------SIMNLFGVLKY  224 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~-~~~-------------~~~~~~~~~k~  224 (333)
                      |+..... .....+...+++|+.++.+++++++...++|||+||..+|+... .+.             .+.+.|+.+  
T Consensus       390 Aa~~~~~-~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s--  466 (660)
T PRK08125        390 VAIATPI-EYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS--  466 (660)
T ss_pred             ccccCch-hhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH--
Confidence            9976422 12223345778999999999998865338999999999998421 111             122356654  


Q ss_pred             HHHHHHHH----HhcCCCEEEEEcccccCCCCCC----------cchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          225 KKMGEDFV----QKSGLPFTIIRAGRLTDGPYTS----------YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       225 k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      |..+|+++    +.+|++++++||+++ |||+..          .....++..+..+..+.+++++++.++|+|++|+|+
T Consensus       467 K~~~E~~~~~~~~~~g~~~~ilR~~~v-yGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~  545 (660)
T PRK08125        467 KQLLDRVIWAYGEKEGLRFTLFRPFNW-MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIE  545 (660)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEEcee-eCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHH
Confidence            55566555    456999999999955 888642          124455555555566667788899999999999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          291 ACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+++++.  ..+++||+++|+      ..++++|+++.+.+
T Consensus       546 a~~~~l~~~~~~~~g~iyni~~~~------~~~s~~el~~~i~~  583 (660)
T PRK08125        546 ALFRIIENKDNRCDGQIINIGNPD------NEASIRELAEMLLA  583 (660)
T ss_pred             HHHHHHhccccccCCeEEEcCCCC------CceeHHHHHHHHHH
Confidence            9999998753  347899999852      25899999998864

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=3.2e-29  Score=228.50  Aligned_cols=234  Identities=18%  Similarity=0.230  Sum_probs=167.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hcc-CCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGK-QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~-~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .+|+||||||+||||+++++.|+++|++|++++|+.......   ... ....+++++.+|++|+++++ ++++++|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFE-LAIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHH-HHHcCCCEEE
Confidence            467999999999999999999999999999999887543321   111 01246889999999999998 8899999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCC------------CCCccc------h
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN------------ELPWSI------M  216 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~------------~~~~~~------~  216 (333)
                      ||||..... ...+.....+++|+.++.++++++..  ++++||++||.++++..            +.+..+      .
T Consensus        83 h~A~~~~~~-~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  161 (325)
T PLN02989         83 HTASPVAIT-VKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK  161 (325)
T ss_pred             EeCCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence            999975321 12233345678999999999998743  46899999998776421            111111      2


Q ss_pred             hhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcc---hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD---LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +.|+.+  |..+|.++    +++|++++++||+. +|||+....   ...++..+..+...  ++  ...++|+|++|+|
T Consensus       162 ~~Y~~s--K~~~E~~~~~~~~~~~~~~~ilR~~~-vyGp~~~~~~~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva  234 (325)
T PLN02989        162 QWYVLS--KTLAEDAAWRFAKDNEIDLIVLNPGL-VTGPILQPTLNFSVAVIVELMKGKNP--FN--TTHHRFVDVRDVA  234 (325)
T ss_pred             cchHHH--HHHHHHHHHHHHHHcCCeEEEEcCCc-eeCCCCCCCCCchHHHHHHHHcCCCC--CC--CcCcCeeEHHHHH
Confidence            356655  55566554    45699999999995 489875421   12233333222222  12  3457899999999


Q ss_pred             HHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          290 EACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       290 ~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++.+++.+.. ++.||+++        ...+++|+++.+++
T Consensus       235 ~a~~~~l~~~~~-~~~~ni~~--------~~~s~~ei~~~i~~  268 (325)
T PLN02989        235 LAHVKALETPSA-NGRYIIDG--------PVVTIKDIENVLRE  268 (325)
T ss_pred             HHHHHHhcCccc-CceEEEec--------CCCCHHHHHHHHHH
Confidence            999999987654 45899954        45899999999875

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=3.9e-29  Score=229.14  Aligned_cols=239  Identities=21%  Similarity=0.244  Sum_probs=164.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +.++++||||||+||||++|+++|+++|++|++++|+.+.....   .......+++++.+|++|++++. +.++++|+|
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~v   84 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFE-APIAGCDLV   84 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHH-HHHhcCCEE
Confidence            44578999999999999999999999999999999886443221   11101236889999999999998 888999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-C-CCCeEEEEeccccccCCC----------C----------Cc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKFNE----------L----------PW  213 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~-~~~~~v~~SS~~~~~~~~----------~----------~~  213 (333)
                      ||+|+....  ...++...++++|+.++.+++++++ . ++++||++||.++|+...          .          +.
T Consensus        85 ih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~  162 (338)
T PLN00198         85 FHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEK  162 (338)
T ss_pred             EEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcC
Confidence            999986421  1112222356899999999999874 3 589999999999887321          0          11


Q ss_pred             cchhhhHHHHHHHHHHHH----HHhcCCCEEEEEcccccCCCCCCcchHH---HHHHhhcccceeecC-CCC----cccc
Q 019935          214 SIMNLFGVLKYKKMGEDF----VQKSGLPFTIIRAGRLTDGPYTSYDLNT---LLKATAGERRAVLMG-QGD----KLIG  281 (333)
Q Consensus       214 ~~~~~~~~~k~k~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~-~~~----~~~~  281 (333)
                      .+.+.|+.+  |..+|.+    .+++|++++++||+.+ |||......+.   +...+..+......+ .+.    ..++
T Consensus       163 ~p~~~Y~~s--K~~~E~~~~~~~~~~~~~~~~~R~~~v-yGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  239 (338)
T PLN00198        163 PPTWGYPAS--KTLAEKAAWKFAEENNIDLITVIPTLM-AGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSIS  239 (338)
T ss_pred             CccchhHHH--HHHHHHHHHHHHHhcCceEEEEeCCce-ECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcc
Confidence            234567755  4455544    4457999999999955 89874322211   112222233333333 222    2369


Q ss_pred             cccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          282 EVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |+|++|+|++++.+++.+.. ++.|+.++        ...+++|+++.+.+
T Consensus       240 ~i~V~D~a~a~~~~~~~~~~-~~~~~~~~--------~~~s~~el~~~i~~  281 (338)
T PLN00198        240 ITHVEDVCRAHIFLAEKESA-SGRYICCA--------ANTSVPELAKFLIK  281 (338)
T ss_pred             eeEHHHHHHHHHHHhhCcCc-CCcEEEec--------CCCCHHHHHHHHHH
Confidence            99999999999999987543 34574443        45789999998864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=2.5e-29  Score=249.72  Aligned_cols=239  Identities=18%  Similarity=0.220  Sum_probs=179.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhh--cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--~~~d~  154 (333)
                      ++|+|||||||||||++|++.|+++  |++|++++|..  +....+.......+++++.+|++|.+.+. .++  .++|+
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~-~~~~~~~~D~   83 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVN-YLLITEGIDT   83 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHH-HHHhhcCCCE
Confidence            4579999999999999999999998  68999998753  22222221111457899999999988776 554  58999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCC----------CCccchhhhHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNE----------LPWSIMNLFGVL  222 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~----------~~~~~~~~~~~~  222 (333)
                      |||+|+..... ..+.....++++|+.++.+++++++. + ++||||+||..+|+...          .+..+.+.|+.+
T Consensus        84 ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         84 IMHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            99999986432 12233345778999999999998865 5 89999999999997432          223345667744


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                        |..+|.+++    +.+++++++||+.+ ||+...  ...+.+...+..+..+.+++++++.++|+|++|+|++++.++
T Consensus       163 --K~~aE~~v~~~~~~~~l~~vilR~~~V-yGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l  239 (668)
T PLN02260        163 --KAGAEMLVMAYGRSYGLPVITTRGNNV-YGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL  239 (668)
T ss_pred             --HHHHHHHHHHHHHHcCCCEEEECcccc-cCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHH
Confidence              555666554    46999999999955 888753  224455555555566677788999999999999999999998


Q ss_pred             cCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +... .+++||++++       +..++.|+++.+++
T Consensus       240 ~~~~-~~~vyni~~~-------~~~s~~el~~~i~~  267 (668)
T PLN02260        240 HKGE-VGHVYNIGTK-------KERRVIDVAKDICK  267 (668)
T ss_pred             hcCC-CCCEEEECCC-------CeeEHHHHHHHHHH
Confidence            7643 4689999985       67899999998875

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=4.5e-29  Score=229.95  Aligned_cols=237  Identities=18%  Similarity=0.203  Sum_probs=172.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |+||||||+||||++|+++|+++|++ |++++|..  .............+++++.+|++|.+++. ++++  ++|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELD-RIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHH-HHHHhcCCCEEEE
Confidence            37999999999999999999999976 55555532  11122211111345788999999999988 7776  5899999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC----------CCCeEEEEeccccccCC-----------------C
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKFN-----------------E  210 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----------~~~~~v~~SS~~~~~~~-----------------~  210 (333)
                      +|+..... ..+.....++++|+.|+.+++++++.          ++++||++||..+|+..                 +
T Consensus        80 ~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         80 LAAESHVD-RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET  158 (352)
T ss_pred             CCcccCCc-chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence            99975422 22344567899999999999998843          45799999999888741                 1


Q ss_pred             CCccchhhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCccccccc
Q 019935          211 LPWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       211 ~~~~~~~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      .+..+.+.|+.+  |..+|.++    +.+|++++++|++. +|||...  ..+..++..+..+.....++++++.++|+|
T Consensus       159 ~~~~p~~~Y~~s--K~~~E~~~~~~~~~~g~~~vilr~~~-v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  235 (352)
T PRK10084        159 TAYAPSSPYSAS--KASSDHLVRAWLRTYGLPTIVTNCSN-NYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY  235 (352)
T ss_pred             CCCCCCChhHHH--HHHHHHHHHHHHHHhCCCEEEEeccc-eeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEE
Confidence            234556677755  44455444    45699999999995 5888753  224444444444555567788999999999


Q ss_pred             HHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++++.+++.+. .+++||++++       +..++.|+++.+++
T Consensus       236 v~D~a~a~~~~l~~~~-~~~~yni~~~-------~~~s~~~~~~~i~~  275 (352)
T PRK10084        236 VEDHARALYKVVTEGK-AGETYNIGGH-------NEKKNLDVVLTICD  275 (352)
T ss_pred             HHHHHHHHHHHHhcCC-CCceEEeCCC-------CcCcHHHHHHHHHH
Confidence            9999999999988643 4789999985       66888888887653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.97  E-value=4e-29  Score=235.15  Aligned_cols=232  Identities=15%  Similarity=0.147  Sum_probs=170.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++|+||||||+||||++|+++|+++|++|++++|..... +.........+++++.+|+.++      .+.++|+|||+|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~------~l~~~D~ViHlA  191 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP------ILLEVDQIYHLA  191 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh------hhcCCCEEEEee
Confidence            568999999999999999999999999999998753221 1111111145678888888554      345699999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC------C------CccchhhhHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE------L------PWSIMNLFGVLKYKK  226 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~------~------~~~~~~~~~~~k~k~  226 (333)
                      +..... .....+...+++|+.++.+++++|+. ++ +||++||..+|+...      .      +..+.+.|+  ++|.
T Consensus       192 a~~~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~--~SK~  267 (442)
T PLN02206        192 CPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD--EGKR  267 (442)
T ss_pred             eecchh-hhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHH--HHHH
Confidence            865421 11223456788999999999998865 64 999999999997421      1      222234566  5566


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCC----CcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYT----SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .+|+++    ++++++++++||+.+ |||..    ...+..++.....+..+.+++++++.++|+|++|+|++++.+++.
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~~v-yGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~  346 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIFNT-YGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG  346 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccc-cCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc
Confidence            666655    446899999999955 88863    222445555555566677788899999999999999999999876


Q ss_pred             cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       299 ~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.  +..||++++       ..++++|+++.+++
T Consensus       347 ~~--~g~yNIgs~-------~~~sl~Elae~i~~  371 (442)
T PLN02206        347 EH--VGPFNLGNP-------GEFTMLELAKVVQE  371 (442)
T ss_pred             CC--CceEEEcCC-------CceeHHHHHHHHHH
Confidence            42  458999995       67899999998865

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=9.1e-29  Score=229.95  Aligned_cols=226  Identities=20%  Similarity=0.236  Sum_probs=172.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hc-cCCCCceEEEEccCCCcCCCchhhhc----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FG-KQDEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-~~~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      ...+++||||||||+||++++++|+++|++|++++|+..+....   .. .....+++++.+|++|++++. ++++    
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~~~~~~~  135 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLR-KVLFSEGD  135 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHH-HHHHHhCC
Confidence            34567999999999999999999999999999999987543210   00 001357899999999999998 7776    


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHH
Q 019935          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      ++|+||||++...      ....+.+++|+.++.++++++++ ++++||++||.+++.    +   ...|.  +.|..+|
T Consensus       136 ~~D~Vi~~aa~~~------~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~----p---~~~~~--~sK~~~E  200 (390)
T PLN02657        136 PVDVVVSCLASRT------GGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK----P---LLEFQ--RAKLKFE  200 (390)
T ss_pred             CCcEEEECCccCC------CCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC----c---chHHH--HHHHHHH
Confidence            5999999987532      11234678899999999998854 899999999998764    2   22343  5677788


Q ss_pred             HHHHh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCccc-ccccHHHHHHHHHHhccCcccCCcEE
Q 019935          230 DFVQK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAEACIQALDIEFTEGEIY  306 (333)
Q Consensus       230 ~~l~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~a~~~~l~~~~~~g~~~  306 (333)
                      ++++.  .+++++++||+.+ ++..     ..+...+..+....++++++..+ .+||++|+|++++.++.++...+++|
T Consensus       201 ~~l~~~~~gl~~tIlRp~~~-~~~~-----~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~  274 (390)
T PLN02657        201 AELQALDSDFTYSIVRPTAF-FKSL-----GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVL  274 (390)
T ss_pred             HHHHhccCCCCEEEEccHHH-hccc-----HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEE
Confidence            88875  8999999999976 4432     22334444455566778877644 67999999999999998776678999


Q ss_pred             EecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          307 EINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       307 ~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++      ...+|++|+++.+.+
T Consensus       275 ~Iggp------~~~~S~~Eia~~l~~  294 (390)
T PLN02657        275 PIGGP------GKALTPLEQGEMLFR  294 (390)
T ss_pred             EcCCC------CcccCHHHHHHHHHH
Confidence            99872      147899999998864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=3.8e-29  Score=227.59  Aligned_cols=230  Identities=20%  Similarity=0.276  Sum_probs=170.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|+||||||+||||+++++.|+++|  ++|++++|+..+...+.......+++++.+|++|++.+. ++++++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~-~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLT-RALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHH-HHHhcCCEEEEC
Confidence            46899999999999999999999986  789999998655433322222356889999999999998 889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHH-----
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV-----  232 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l-----  232 (333)
                      ||....+... ..+...+++|+.|+.+++++++. ++++||++||....       .+.+.|+.+  |..+|.++     
T Consensus        82 Ag~~~~~~~~-~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-------~p~~~Y~~s--K~~~E~l~~~~~~  151 (324)
T TIGR03589        82 AALKQVPAAE-YNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-------NPINLYGAT--KLASDKLFVAANN  151 (324)
T ss_pred             cccCCCchhh-cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-------CCCCHHHHH--HHHHHHHHHHHHh
Confidence            9976433222 22345789999999999998854 78999999997543       334567755  44455544     


Q ss_pred             --HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          233 --QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       233 --~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                        ++.|++++++|||++ +|+... ..+.+......+.....+++++..++|+|++|+|++++.+++.. ..+++|+ ..
T Consensus       152 ~~~~~gi~~~~lR~g~v-~G~~~~-~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-~~~~~~~-~~  227 (324)
T TIGR03589       152 ISGSKGTRFSVVRYGNV-VGSRGS-VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-LGGEIFV-PK  227 (324)
T ss_pred             hccccCcEEEEEeecce-eCCCCC-cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-CCCCEEc-cC
Confidence              346899999999955 788654 34555555443432333456778889999999999999999864 2467774 44


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +       ...++.|+++.+.+
T Consensus       228 ~-------~~~sv~el~~~i~~  242 (324)
T TIGR03589       228 I-------PSMKITDLAEAMAP  242 (324)
T ss_pred             C-------CcEEHHHHHHHHHh
Confidence            3       45799999988764

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=1.1e-28  Score=227.23  Aligned_cols=234  Identities=25%  Similarity=0.290  Sum_probs=163.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..++||||||+||||++++++|+++|++|++++|+.+....+....    ...+++++.+|++|.+.++ ++++++|+||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~-~~~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFD-DAIRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHH-HHHhCCCEEE
Confidence            3468999999999999999999999999999999875544321110    0135788999999999998 8899999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCC--CC------c----------cch
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNE--LP------W----------SIM  216 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~--~~------~----------~~~  216 (333)
                      |+|+....  ...+.....+++|+.++.+++++++. + ++||||+||.++++...  .+      +          .+.
T Consensus        83 H~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         83 HVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            99986531  11222235789999999999998854 5 78999999997764211  11      1          112


Q ss_pred             hhhHHHHHHHHHHHH----HHhcCCCEEEEEcccccCCCCCCcc-hHHHHHH---hhcccceeecCCCCcccccccHHHH
Q 019935          217 NLFGVLKYKKMGEDF----VQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKA---TAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       217 ~~~~~~k~k~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      +.|+.+  |..+|.+    .+++|++++++||+. +|||..... ...+...   ..+...  .++. ...++|+|++|+
T Consensus       161 ~~Y~~s--K~~~E~~~~~~~~~~gi~~~ilRp~~-v~Gp~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~r~~v~V~Dv  234 (351)
T PLN02650        161 WMYFVS--KTLAEKAAWKYAAENGLDFISIIPTL-VVGPFISTSMPPSLITALSLITGNEA--HYSI-IKQGQFVHLDDL  234 (351)
T ss_pred             chHHHH--HHHHHHHHHHHHHHcCCeEEEECCCc-eECCCCCCCCCccHHHHHHHhcCCcc--ccCc-CCCcceeeHHHH
Confidence            356644  5555544    456799999999995 589875321 1112211   111111  1222 234799999999


Q ss_pred             HHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          289 AEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++.+++++... ..|+ .++       ...++.|+++.|++
T Consensus       235 a~a~~~~l~~~~~~-~~~i-~~~-------~~~s~~el~~~i~~  269 (351)
T PLN02650        235 CNAHIFLFEHPAAE-GRYI-CSS-------HDATIHDLAKMLRE  269 (351)
T ss_pred             HHHHHHHhcCcCcC-ceEE-ecC-------CCcCHHHHHHHHHH
Confidence            99999999876543 4674 443       55899999999875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.96  E-value=4.6e-29  Score=224.65  Aligned_cols=220  Identities=16%  Similarity=0.137  Sum_probs=166.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+||||||+||||+++++.|+++| +|++++|...               .+.+|++|.+.+. ++++  ++|+|||+|+
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~-~~~~~~~~D~Vih~Aa   63 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVA-ETVRKIRPDVIVNAAA   63 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHH-HHHHhcCCCEEEECCc
Confidence            479999999999999999999999 7998887531               2368999999898 7777  5899999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ...... ....+...+++|+.++.+++++++. + .+||++||..+|+..       +.+..|.+.||  ++|..+|+++
T Consensus        64 ~~~~~~-~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg--~sK~~~E~~~  139 (299)
T PRK09987         64 HTAVDK-AESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG--ETKLAGEKAL  139 (299)
T ss_pred             cCCcch-hhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHH--HHHHHHHHHH
Confidence            865322 2223344568999999999998865 5 489999999998642       23344556677  6677799999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCC--CCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ--GDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      +.+..+++++|++++ |||........+...+..++.+.++++  +.+.+.+...+|++.++..++..+.. +++||+++
T Consensus       140 ~~~~~~~~ilR~~~v-yGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~giyni~~  217 (299)
T PRK09987        140 QEHCAKHLIFRTSWV-YAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVA  217 (299)
T ss_pred             HHhCCCEEEEeccee-cCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-CCeEEeeC
Confidence            888889999999965 888754445666666655566666666  45555566677788888877765433 35999999


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +       +..||.|+++.|.+
T Consensus       218 ~-------~~~s~~e~~~~i~~  232 (299)
T PRK09987        218 S-------GTTTWHDYAALVFE  232 (299)
T ss_pred             C-------CCccHHHHHHHHHH
Confidence            5       67899999988743

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=1.2e-28  Score=226.07  Aligned_cols=240  Identities=14%  Similarity=0.120  Sum_probs=172.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhcc--CCCCceEEEEccCCCcCCCchhhhc-
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGK--QDEETLQVCKGDTRNPKDLDPAIFE-  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~--~~~~~~~~v~~D~~d~~~~~~~~~~-  150 (333)
                      +.++++||||||+||||++++++|+++|++|++++|+.+.     .+.+...  ....+++++.+|++|.+.+. ++++ 
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLR-RWLDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHH-HHHHH
Confidence            4567899999999999999999999999999999987542     2212110  01245889999999999988 7776 


Q ss_pred             -CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-----eEEEEeccccccCC------CCCccchh
Q 019935          151 -GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-----RIVLVSSVGVTKFN------ELPWSIMN  217 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-----~~v~~SS~~~~~~~------~~~~~~~~  217 (333)
                       ++|+|||+|+..... .....+...+++|+.|+.+++++++. +++     +||++||.++|+..      +.+..+.+
T Consensus        82 ~~~d~Vih~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~  160 (340)
T PLN02653         82 IKPDEVYNLAAQSHVA-VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRS  160 (340)
T ss_pred             cCCCEEEECCcccchh-hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCC
Confidence             479999999975432 11233345668899999999998854 554     89999999999853      23444566


Q ss_pred             hhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCc-c----hHHHHHHhhcccce-eecCCCCcccccccHHH
Q 019935          218 LFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSY-D----LNTLLKATAGERRA-VLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       218 ~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~-~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D  287 (333)
                      .|+.+  |..+|.++    ++++++++..|+.+. +||+... .    +..+...+..+... ..++++++.++|+|++|
T Consensus       161 ~Y~~s--K~~~e~~~~~~~~~~~~~~~~~~~~~~-~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D  237 (340)
T PLN02653        161 PYAVA--KVAAHWYTVNYREAYGLFACNGILFNH-ESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD  237 (340)
T ss_pred             hhHHH--HHHHHHHHHHHHHHcCCeEEEeeeccc-cCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence            77755  44455554    456888887777644 5664321 1    22222233333333 45588999999999999


Q ss_pred             HHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          288 VAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       288 va~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +|++++.+++...  ++.||+++|       +..+++|+++.+.+
T Consensus       238 ~a~a~~~~~~~~~--~~~yni~~g-------~~~s~~e~~~~i~~  273 (340)
T PLN02653        238 YVEAMWLMLQQEK--PDDYVVATE-------ESHTVEEFLEEAFG  273 (340)
T ss_pred             HHHHHHHHHhcCC--CCcEEecCC-------CceeHHHHHHHHHH
Confidence            9999999998753  468999986       66899999998764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=2.2e-28  Score=221.77  Aligned_cols=236  Identities=19%  Similarity=0.224  Sum_probs=173.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC  157 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~  157 (333)
                      +||||||||+||++++++|++.|  ++|++++|...  ..+.+.......+++++.+|++|++++. +++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVS-RLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHH-HHHhhcCCCEEEE
Confidence            48999999999999999999987  78998887431  1111111111346888999999999998 78876  899999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEeccccccCC--------CCCccchhhhHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~~~~~~~--------~~~~~~~~~~~~~k~k~~  227 (333)
                      +|+..... ........++++|+.++.+++++++. +.+ ++|++||..+|+..        ..+..+.+.|+.+  |..
T Consensus        80 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~s--K~~  156 (317)
T TIGR01181        80 FAAESHVD-RSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSAS--KAA  156 (317)
T ss_pred             cccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHH--HHH
Confidence            99875421 11223445788999999999998854 443 89999999888732        1223344556644  555


Q ss_pred             HHHHH----HhcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          228 GEDFV----QKSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       228 ~e~~l----~~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                      +|.++    ++.+++++++||+.+ ||+...  ...+.+......+..+..+++++..++|+|++|+|+++..++++. .
T Consensus       157 ~e~~~~~~~~~~~~~~~i~R~~~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~-~  234 (317)
T TIGR01181       157 SDHLVRAYHRTYGLPALITRCSNN-YGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG-R  234 (317)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccc-cCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-C
Confidence            55544    457999999999955 888642  224445455554555667788888999999999999999999864 3


Q ss_pred             CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          302 EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       302 ~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+++||++++       +..++.|+++.+.+
T Consensus       235 ~~~~~~~~~~-------~~~s~~~~~~~i~~  258 (317)
T TIGR01181       235 VGETYNIGGG-------NERTNLEVVETILE  258 (317)
T ss_pred             CCceEEeCCC-------CceeHHHHHHHHHH
Confidence            4689999985       67899999999865

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.96  E-value=4.5e-28  Score=223.36  Aligned_cols=240  Identities=18%  Similarity=0.279  Sum_probs=164.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++||||||+||||++++++|+++|++|++++|+..+...+.... ...+++++.+|++|.+.+. ++++++|+|||+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD-EAVKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHH-HHHcCCCEEEEC
Confidence            34578999999999999999999999999999999876554433211 1356889999999999998 888899999999


Q ss_pred             CCCCCCCC-CCCCCCCC-----CcchhHHHHHHHHHhcC-C-CCCeEEEEeccccccCCC------CCcc----------
Q 019935          159 TGTTAFPS-RRWDGDNT-----PEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKFNE------LPWS----------  214 (333)
Q Consensus       159 a~~~~~~~-~~~~~~~~-----~~~~n~~~~~~l~~a~~-~-~~~~~v~~SS~~~~~~~~------~~~~----------  214 (333)
                      |+...... ........     .++.|+.++.+++++++ . ++++||++||.++|+...      .+..          
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99764321 11122222     33445799999999874 4 478999999999987321      0111          


Q ss_pred             -----chhhhHHHHHHHHHHH----HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh----hccccee-ecCC---CC
Q 019935          215 -----IMNLFGVLKYKKMGED----FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT----AGERRAV-LMGQ---GD  277 (333)
Q Consensus       215 -----~~~~~~~~k~k~~~e~----~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~----~~~~~~~-~~~~---~~  277 (333)
                           +.+.|+.+  |..+|+    +.+++|++++++||+++ |||+....++.++..+    .+..... .++.   ..
T Consensus       167 ~~~~~~~~~Y~~s--K~~~E~~~~~~~~~~~~~~~~lR~~~v-yGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        167 WNTKASGWVYVLS--KLLTEEAAFKYAKENGIDLVSVITTTV-AGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             hccCCCCccHHHH--HHHHHHHHHHHHHHcCCeEEEEcCCcc-cCCCcCCCCCchHHHHHHHhcCCcccccccccccccc
Confidence                 11356655  445554    44557999999999955 8987543233222222    1211111 1111   11


Q ss_pred             cccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          278 KLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       278 ~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..++|+|++|+|++++.++..+.. +..|++++        ...+++|+++.+.+
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~-~~~~~~~~--------~~~s~~el~~~i~~  289 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKA-EGRYICCV--------DSYDMSELINHLSK  289 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCc-CccEEecC--------CCCCHHHHHHHHHH
Confidence            235899999999999999987543 34676543        56899999999865

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.96  E-value=2.4e-29  Score=218.58  Aligned_cols=217  Identities=24%  Similarity=0.361  Sum_probs=170.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC--cEEEEcCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV--THVICCTGTT  162 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~--d~vi~~a~~~  162 (333)
                      ||||||+||||++++++|+++|+.|+.+.|+.........   ..+++++.+|+.|.+.++ ++++..  |+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~~~~~~~~~dl~~~~~~~-~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---KLNVEFVIGDLTDKEQLE-KLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---HTTEEEEESETTSHHHHH-HHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---cceEEEEEeecccccccc-ccccccCceEEEEeeccc
Confidence            7999999999999999999999999999988765543221   128899999999999998 788754  9999999975


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH--
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV--  232 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l--  232 (333)
                      .. ...+......++.|+.++.+++++++. ++++||++||..+|+..       +.+..+.+.|+.+  |...|+++  
T Consensus        77 ~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~--K~~~e~~~~~  153 (236)
T PF01370_consen   77 SN-PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS--KRAAEELLRD  153 (236)
T ss_dssp             SH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH--HHHHHHHHHH
T ss_pred             cc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc
Confidence            31 011233455788899999999998854 78999999999999854       2233455667754  44455444  


Q ss_pred             --HhcCCCEEEEEcccccCCCC-----CCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcE
Q 019935          233 --QKSGLPFTIIRAGRLTDGPY-----TSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEI  305 (333)
Q Consensus       233 --~~~gi~~~~vrpg~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~  305 (333)
                        ++.+++++++||+.+ ||+.     ....+..+...+..+.+...+++++..++++|++|+|++++.+++++...+++
T Consensus       154 ~~~~~~~~~~~~R~~~v-yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~  232 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNV-YGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGI  232 (236)
T ss_dssp             HHHHHTSEEEEEEESEE-ESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEE
T ss_pred             ccccccccccccccccc-ccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCE
Confidence              456999999999955 8888     22335666766666677888899999999999999999999999998766899


Q ss_pred             EEec
Q 019935          306 YEIN  309 (333)
Q Consensus       306 ~~v~  309 (333)
                      |||+
T Consensus       233 yNig  236 (236)
T PF01370_consen  233 YNIG  236 (236)
T ss_dssp             EEES
T ss_pred             EEeC
Confidence            9985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=3.8e-28  Score=217.52  Aligned_cols=215  Identities=18%  Similarity=0.225  Sum_probs=165.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC--cEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV--THVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~--d~vi~~a~~  161 (333)
                      +||||||+||||++++++|+++|++|++++|+                   .+|+.|++.++ ++++++  |+|||+|+.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~-~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALE-RLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHH-HHHHhCCCCEEEECCcc
Confidence            48999999999999999999999999999885                   36999999898 778765  999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ..... ........+++|+.++.+++++++. + .+||++||.++|+..       +.+..+.+.|+  +.|..+|++++
T Consensus        61 ~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~--~~K~~~E~~~~  136 (287)
T TIGR01214        61 TDVDG-AESDPEKAFAVNALAPQNLARAAARHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYG--QSKLAGEQAIR  136 (287)
T ss_pred             ccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh--HHHHHHHHHHH
Confidence            54221 1122344678999999999998865 5 489999999988642       22233445555  66778999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      ..+++++++||+.+ ||+..... ...+...+..+......+  +..+++++++|+|++++.++..+...+++||++++ 
T Consensus       137 ~~~~~~~ilR~~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~-  212 (287)
T TIGR01214       137 AAGPNALIVRTSWL-YGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANS-  212 (287)
T ss_pred             HhCCCeEEEEeeec-ccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECC-
Confidence            88999999999955 78875322 334444444444444444  46789999999999999999886445789999984 


Q ss_pred             CCCCCCCcccHHHHHHHHhc
Q 019935          313 GEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       313 ~~~~~~~~~s~~e~~~~i~~  332 (333)
                            +..+|.|+++.+.+
T Consensus       213 ------~~~s~~e~~~~i~~  226 (287)
T TIGR01214       213 ------GQCSWYEFAQAIFE  226 (287)
T ss_pred             ------CCcCHHHHHHHHHH
Confidence                  77899999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=6.9e-28  Score=223.97  Aligned_cols=225  Identities=20%  Similarity=0.228  Sum_probs=168.6

Q ss_pred             CCCCCeEEEE----cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc-------cCCCCceEEEEccCCCcCCCchh
Q 019935           79 ASSSKLVLVA----GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-------KQDEETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        79 ~~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~~~v~~D~~d~~~~~~~  147 (333)
                      ..++++||||    |||||||++|+++|+++||+|++++|+......+..       .....+++++.+|+.|   +. +
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~-~  124 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VK-S  124 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HH-h
Confidence            3455789999    999999999999999999999999998754322110       1113458899999987   33 3


Q ss_pred             hh--cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCC-CCccchhhhHHHH
Q 019935          148 IF--EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-LPWSIMNLFGVLK  223 (333)
Q Consensus       148 ~~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~-~~~~~~~~~~~~k  223 (333)
                      .+  .++|+|||+++.                 +..++.+++++++ .|+++||++||.++|+..+ .+..+........
T Consensus       125 ~~~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~  187 (378)
T PLN00016        125 KVAGAGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA  187 (378)
T ss_pred             hhccCCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc
Confidence            33  479999999752                 2457889999886 4899999999999998533 2222211111111


Q ss_pred             HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          224 YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       224 ~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                      .|..+|+++++.+++++++||+.+ ||+...... ..+...+..+....++++++..++++|++|+|++++.++.++...
T Consensus       188 sK~~~E~~l~~~~l~~~ilRp~~v-yG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~  266 (378)
T PLN00016        188 GHLEVEAYLQKLGVNWTSFRPQYI-YGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAA  266 (378)
T ss_pred             hHHHHHHHHHHcCCCeEEEeceeE-ECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcccc
Confidence            578899999999999999999955 788654322 334444555555666678888999999999999999999987666


Q ss_pred             CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          303 GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       303 g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++||++++       +.+++.|+++.+++
T Consensus       267 ~~~yni~~~-------~~~s~~el~~~i~~  289 (378)
T PLN00016        267 GQIFNIVSD-------RAVTFDGMAKACAK  289 (378)
T ss_pred             CCEEEecCC-------CccCHHHHHHHHHH
Confidence            789999984       77999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=7.7e-28  Score=221.74  Aligned_cols=242  Identities=21%  Similarity=0.236  Sum_probs=171.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhhccC--CCCceEEEEccCCCcCCCchhhhc--
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      .+++++||||||+||||++|+++|+++|++|++++|.....    .......  ...++.++.+|++|++.+. ++++  
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~-~~~~~~   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALE-KVFAST   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHH-HHHHhC
Confidence            35668999999999999999999999999999998753221    1111110  1346889999999999988 7765  


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-------CCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-------NELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~  222 (333)
                      ++|+|||+|+..... .........+++|+.++.+++++++. ++++||++||.++|+.       ++.+..+.+.|+  
T Consensus        81 ~~d~vih~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~--  157 (352)
T PLN02240         81 RFDAVIHFAGLKAVG-ESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYG--  157 (352)
T ss_pred             CCCEEEEccccCCcc-ccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHH--
Confidence            689999999875321 12233345788999999999998854 7899999999988873       233444455566  


Q ss_pred             HHHHHHHHHHHh-----cCCCEEEEEcccccCCCCCC--------c---ch-HHHHHHhhccc-ceeecC------CCCc
Q 019935          223 KYKKMGEDFVQK-----SGLPFTIIRAGRLTDGPYTS--------Y---DL-NTLLKATAGER-RAVLMG------QGDK  278 (333)
Q Consensus       223 k~k~~~e~~l~~-----~gi~~~~vrpg~~~~g~~~~--------~---~~-~~~~~~~~~~~-~~~~~~------~~~~  278 (333)
                      .+|..+|.+++.     .+++++++|++.+ ||+...        .   .+ ..+.....+.. .+..++      ++.+
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  236 (352)
T PLN02240        158 RTKLFIEEICRDIHASDPEWKIILLRYFNP-VGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG  236 (352)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEEEEeecCc-CCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence            556677776642     4688999999854 665311        0   11 22222222222 233443      6788


Q ss_pred             ccccccHHHHHHHHHHhccCc----ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          279 LIGEVSRIVVAEACIQALDIE----FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       279 ~~~~i~v~Dva~a~~~~l~~~----~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++|+|++|+|++++.++...    ...+++||++++       +.++++|+++.+++
T Consensus       237 ~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~-------~~~s~~el~~~i~~  287 (352)
T PLN02240        237 VRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG-------KGTSVLEMVAAFEK  287 (352)
T ss_pred             EEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCC-------CcEeHHHHHHHHHH
Confidence            899999999999999888642    234689999985       77899999999865

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.96  E-value=2.7e-27  Score=223.53  Aligned_cols=234  Identities=25%  Similarity=0.391  Sum_probs=171.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----------CCCceEEEEccCCCcCCCchh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----------DEETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----------~~~~~~~v~~D~~d~~~~~~~  147 (333)
                      ..++++||||||+|+||++++++|+++|++|++++|+.++.+.+....           ...+++++.+|+.|.++++ +
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~-~  155 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG-P  155 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH-H
Confidence            346789999999999999999999999999999999987765543211           0135889999999999998 8


Q ss_pred             hhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHH
Q 019935          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~  226 (333)
                      .++++|+||||+|....   .+......+++|+.|+.+++++++. +++|||++||++++............+++..+|+
T Consensus       156 aLggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kr  232 (576)
T PLN03209        156 ALGNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKR  232 (576)
T ss_pred             HhcCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHH
Confidence            89999999999987531   1112234678899999999998854 8899999999987421110111224566778899


Q ss_pred             HHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-cCCcE
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-TEGEI  305 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~  305 (333)
                      .+|+++++.|++|++||||++ +++...+..         ...............+++.+|||+++++++.++. ..+++
T Consensus       233 aaE~~L~~sGIrvTIVRPG~L-~tp~d~~~~---------t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kv  302 (576)
T PLN03209        233 KAEEALIASGLPYTIVRPGGM-ERPTDAYKE---------THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKV  302 (576)
T ss_pred             HHHHHHHHcCCCEEEEECCee-cCCcccccc---------ccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceE
Confidence            999999999999999999966 555332210         1111111122233457999999999999999765 66899


Q ss_pred             EEecCCCCCCCCCCcccHHHHHHHH
Q 019935          306 YEINSVEGEGPGSDPQKWRELFKAA  330 (333)
Q Consensus       306 ~~v~~g~~~~~~~~~~s~~e~~~~i  330 (333)
                      |.+.++...    ....+.++++.|
T Consensus       303 vevi~~~~~----p~~~~~~~~~~i  323 (576)
T PLN03209        303 VEVIAETTA----PLTPMEELLAKI  323 (576)
T ss_pred             EEEEeCCCC----CCCCHHHHHHhc
Confidence            999987542    336777777655

>PLN02686 cinnamoyl-CoA reductase

Probab=99.96  E-value=1.5e-27  Score=220.53  Aligned_cols=239  Identities=17%  Similarity=0.178  Sum_probs=167.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-------CCCceEEEEccCCCcCCCchhhh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      ....++|+||||||+||||++++++|+++|++|++++|+.+..+.+....       ...+++++.+|++|.+++. +++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~-~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLH-EAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHH-HHH
Confidence            34566789999999999999999999999999999999865544332110       0135788999999999998 889


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccc--cccC---CC-------C----
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG--VTKF---NE-------L----  211 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~--~~~~---~~-------~----  211 (333)
                      +++|+|||+|+...... .......+.++|+.++.+++++++.  +++|||++||..  +|+.   ..       .    
T Consensus       127 ~~~d~V~hlA~~~~~~~-~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~  205 (367)
T PLN02686        127 DGCAGVFHTSAFVDPAG-LSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD  205 (367)
T ss_pred             HhccEEEecCeeecccc-cccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence            99999999998753211 0111234677899999999998853  799999999974  4542   11       0    


Q ss_pred             ---CccchhhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcccceeecCCCCcccccc
Q 019935          212 ---PWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       212 ---~~~~~~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                         +..+.+.|+.+  |..+|.++    ++.|++++++||+++ |||.... ....+...+.+  ....++++  ..+|+
T Consensus       206 ~~~~~~p~~~Y~~s--K~~~E~~~~~~~~~~gl~~v~lRp~~v-yGp~~~~~~~~~~~~~~~g--~~~~~g~g--~~~~v  278 (367)
T PLN02686        206 ESFCRDNKLWYALG--KLKAEKAAWRAARGKGLKLATICPALV-TGPGFFRRNSTATIAYLKG--AQEMLADG--LLATA  278 (367)
T ss_pred             hhhcccccchHHHH--HHHHHHHHHHHHHhcCceEEEEcCCce-ECCCCCCCCChhHHHHhcC--CCccCCCC--CcCeE
Confidence               11123456655  44455544    456999999999955 8986432 11122333322  23344444  35799


Q ss_pred             cHHHHHHHHHHhccCc--ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          284 SRIVVAEACIQALDIE--FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~--~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++|+|++++.+++..  ...+++| +++|       ..++++|+++.|.+
T Consensus       279 ~V~Dva~A~~~al~~~~~~~~~~~y-i~~g-------~~~s~~e~~~~i~~  321 (367)
T PLN02686        279 DVERLAEAHVCVYEAMGNKTAFGRY-ICFD-------HVVSREDEAEELAR  321 (367)
T ss_pred             EHHHHHHHHHHHHhccCCCCCCCcE-EEeC-------CCccHHHHHHHHHH
Confidence            9999999999999852  2345678 6664       66899999998875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=7.9e-28  Score=217.66  Aligned_cols=224  Identities=15%  Similarity=0.178  Sum_probs=154.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCc---hhhh-----cCCcEEE
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIF-----EGVTHVI  156 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~---~~~~-----~~~d~vi  156 (333)
                      ||||||+||||++|+++|+++|++|+++.|+.......        ..+..+|+.|..+.+   +.++     .++|+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            89999999999999999999999887777654322111        112345655543322   1233     2689999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccchhhhHHHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMG  228 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k~~~  228 (333)
                      |+|+.....  .++ ....++.|+.++.+++++++. ++ +||++||.++|+...       .+..+.+.|+.+|  ..+
T Consensus        74 h~A~~~~~~--~~~-~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK--~~~  147 (308)
T PRK11150         74 HEGACSSTT--EWD-GKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSK--FLF  147 (308)
T ss_pred             ECceecCCc--CCC-hHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHH--HHH
Confidence            999864321  222 234678999999999998865 55 799999999988532       2334556777554  445


Q ss_pred             HHHH----HhcCCCEEEEEcccccCCCCCCc--c----hHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHHhcc
Q 019935          229 EDFV----QKSGLPFTIIRAGRLTDGPYTSY--D----LNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       229 e~~l----~~~gi~~~~vrpg~~~~g~~~~~--~----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |+++    .+.+++++++||+.+ ||++...  .    ...+...+..+... ...++++..++|+|++|+|++++.+++
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~v-yG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~  226 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNV-YGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE  226 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeee-cCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh
Confidence            5444    456899999999954 8887532  1    12232333333333 333566778999999999999999987


Q ss_pred             CcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          298 IEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       298 ~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ...  +++||+++|       ...++.|+++.+.+
T Consensus       227 ~~~--~~~yni~~~-------~~~s~~el~~~i~~  252 (308)
T PRK11150        227 NGV--SGIFNCGTG-------RAESFQAVADAVLA  252 (308)
T ss_pred             cCC--CCeEEcCCC-------CceeHHHHHHHHHH
Confidence            642  469999996       66899999998864

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.3e-27  Score=216.43  Aligned_cols=232  Identities=26%  Similarity=0.297  Sum_probs=173.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC-cEEEEcCCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV-THVICCTGTT  162 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~-d~vi~~a~~~  162 (333)
                      +||||||+||||++|+++|++.|++|++++|...+.....     .++.++.+|++|.+... +...++ |+|||+|+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~-~~~~~~~d~vih~aa~~   75 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVD-ELAKGVPDAVIHLAAQS   75 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHH-HHHhcCCCEEEEccccC
Confidence            4999999999999999999999999999999876554332     46788999999987777 777777 9999999987


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC--------C-CCccchhhhHHHHHHHHHHHHH
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN--------E-LPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~--------~-~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ..+......+..++++|+.++.++++++++ ++++|||.||.++++..        + .+..+.+.|+  .+|..+|+++
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg--~sK~~~E~~~  153 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYG--VSKLAAEQLL  153 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHH--HHHHHHHHHH
Confidence            533221112234789999999999999976 99999998887776632        1 2333444455  6666677666


Q ss_pred             Hh----cCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhcccc-eeecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          233 QK----SGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       233 ~~----~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                      ..    .|++++++||+ .+|||.....     ...+......... ....+++...++++|++|++++++.+++++...
T Consensus       154 ~~~~~~~~~~~~ilR~~-~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  232 (314)
T COG0451         154 RAYARLYGLPVVILRPF-NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG  232 (314)
T ss_pred             HHHHHHhCCCeEEEeee-eeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc
Confidence            54    46999999999 4588876443     2222222333333 455567788889999999999999999987653


Q ss_pred             CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          303 GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       303 g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                        .||+++++      ...+++|+++.+++
T Consensus       233 --~~ni~~~~------~~~~~~e~~~~~~~  254 (314)
T COG0451         233 --VFNIGSGT------AEITVRELAEAVAE  254 (314)
T ss_pred             --EEEeCCCC------CcEEHHHHHHHHHH
Confidence              99999951      26899999998864

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=1.8e-27  Score=218.04  Aligned_cols=238  Identities=20%  Similarity=0.235  Sum_probs=167.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |+||||||+||||+++++.|+++|++|++++|..+.....   .......++.++.+|++|++.+. +++.  ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLT-EILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHH-HHHhcCCCCEEEE
Confidence            4799999999999999999999999999998753322111   11111345778899999998888 6665  6999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCc-cchhhhHHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPW-SIMNLFGVLKYKKMG  228 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~-~~~~~~~~~k~k~~~  228 (333)
                      +|+..... .........+++|+.++.+++++++. ++++||++||.++|+..       +.+. .+.+.|+  .+|..+
T Consensus        80 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~--~sK~~~  156 (338)
T PRK10675         80 FAGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYG--KSKLMV  156 (338)
T ss_pred             CCcccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhH--HHHHHH
Confidence            99875421 11223345788999999999998865 88999999999988732       1222 3345555  556667


Q ss_pred             HHHHHh-----cCCCEEEEEcccccCCCCCC--------c----chHHHHHHhhccc-ceeecC------CCCccccccc
Q 019935          229 EDFVQK-----SGLPFTIIRAGRLTDGPYTS--------Y----DLNTLLKATAGER-RAVLMG------QGDKLIGEVS  284 (333)
Q Consensus       229 e~~l~~-----~gi~~~~vrpg~~~~g~~~~--------~----~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~  284 (333)
                      |++++.     .+++++++|++.+ ||+...        .    ....+.....+.. .+.+++      ++.+.++|+|
T Consensus       157 E~~~~~~~~~~~~~~~~ilR~~~v-~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  235 (338)
T PRK10675        157 EQILTDLQKAQPDWSIALLRYFNP-VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_pred             HHHHHHHHHhcCCCcEEEEEeeee-cCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEE
Confidence            766643     3789999999855 565311        0    1122223332222 222333      5678899999


Q ss_pred             HHHHHHHHHHhccCc--ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIE--FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~--~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++++.+++..  ...+++||++++       +.+++.|+++.+.+
T Consensus       236 v~D~a~~~~~~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  278 (338)
T PRK10675        236 VMDLADGHVAAMEKLANKPGVHIYNLGAG-------VGSSVLDVVNAFSK  278 (338)
T ss_pred             HHHHHHHHHHHHHhhhccCCCceEEecCC-------CceeHHHHHHHHHH
Confidence            999999999998752  233589999985       77899999998865

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.95  E-value=3.8e-27  Score=199.06  Aligned_cols=234  Identities=15%  Similarity=0.171  Sum_probs=182.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-hccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+.+|+||||.||||+||++.|..+||+|++++---...+.. .-.....+++.+..|+..+      ++..+|.|||+
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~~evD~IyhL   98 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LLKEVDQIYHL   98 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH------HHHHhhhhhhh
Confidence            3457999999999999999999999999999998744333322 2122266788888887543      56779999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC------------CCccchhhhHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKK  226 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~------------~~~~~~~~~~~~k~k~  226 (333)
                      |++...+.. ...+.+....|..++.+++..|+..-+||++.||+.+||+..            .|..+.+.|+  ..|+
T Consensus        99 Aapasp~~y-~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyd--egKr  175 (350)
T KOG1429|consen   99 AAPASPPHY-KYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYD--EGKR  175 (350)
T ss_pred             ccCCCCccc-ccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhh--HHHH
Confidence            998764433 344577889999999999997766448999999999999632            2223445555  5566


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCCcc----hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .+|.+.    ++.|+.+.|.|+.+. |||+..+.    ...|+..+...+++.++|+|.+.++|++++|++++++.+++.
T Consensus       176 ~aE~L~~~y~k~~giE~rIaRifNt-yGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s  254 (350)
T KOG1429|consen  176 VAETLCYAYHKQEGIEVRIARIFNT-YGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMES  254 (350)
T ss_pred             HHHHHHHHhhcccCcEEEEEeeecc-cCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcC
Confidence            666554    567999999999965 89985433    556777777888999999999999999999999999999998


Q ss_pred             cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          299 EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       299 ~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..  ..+|+++       |+..|+.|+++++.+
T Consensus       255 ~~~--~pvNiGn-------p~e~Tm~elAemv~~  279 (350)
T KOG1429|consen  255 DYR--GPVNIGN-------PGEFTMLELAEMVKE  279 (350)
T ss_pred             CCc--CCcccCC-------ccceeHHHHHHHHHH
Confidence            754  3599999       578999999998864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.95  E-value=1.5e-27  Score=215.48  Aligned_cols=219  Identities=19%  Similarity=0.172  Sum_probs=158.8

Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCCCCC
Q 019935           86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTTA  163 (333)
Q Consensus        86 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~~~~  163 (333)
                      |||||+||||++|++.|++.|++|+++.+.                  ..+|++|.+++. +.++  ++|+|||+|+...
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~-~~~~~~~~d~Vih~A~~~~   61 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVE-AFFAKEKPTYVILAAAKVG   61 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHH-HHHhccCCCEEEEeeeeec
Confidence            699999999999999999999988766432                  147999998888 6666  5799999998754


Q ss_pred             CCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-C----------Cccchh-hhHHHHHH--HHH
Q 019935          164 FPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-L----------PWSIMN-LFGVLKYK--KMG  228 (333)
Q Consensus       164 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-~----------~~~~~~-~~~~~k~k--~~~  228 (333)
                      ........+...+++|+.++.+++++++. ++++||++||..+|+... .          +..+.+ .|+.+|..  ..+
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725         62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence            22112233455788999999999998854 789999999999988421 1          112222 37755543  233


Q ss_pred             HHHHHhcCCCEEEEEcccccCCCCCCc------chHHHHHH----hhccccee-ecCCCCcccccccHHHHHHHHHHhcc
Q 019935          229 EDFVQKSGLPFTIIRAGRLTDGPYTSY------DLNTLLKA----TAGERRAV-LMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       229 e~~l~~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~----~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      +.+.+..+++++++||+. +||+...+      .++.++..    ...+.... .++++++.++|+|++|++++++.+++
T Consensus       142 ~~~~~~~~~~~~~~R~~~-vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~  220 (306)
T PLN02725        142 QAYRIQYGWDAISGMPTN-LYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR  220 (306)
T ss_pred             HHHHHHhCCCEEEEEecc-eeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence            344556799999999995 58887432      12233322    22233333 36788889999999999999999998


Q ss_pred             CcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          298 IEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       298 ~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .... ++.||++++       ...++.|+++.+++
T Consensus       221 ~~~~-~~~~ni~~~-------~~~s~~e~~~~i~~  247 (306)
T PLN02725        221 RYSG-AEHVNVGSG-------DEVTIKELAELVKE  247 (306)
T ss_pred             cccc-CcceEeCCC-------CcccHHHHHHHHHH
Confidence            7533 467899885       77899999998865

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.95  E-value=2.3e-26  Score=202.02  Aligned_cols=227  Identities=32%  Similarity=0.460  Sum_probs=166.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhhh-cCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~-~~~d~vi~~  158 (333)
                      .+++||||||+|+||++++++|+++|++|+++.|++++.......  ..+++++.+|++|. +.+. +.+ .++|+|||+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~-~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLV-EAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHH-HHhhcCCCEEEEC
Confidence            457999999999999999999999999999999998765544321  34689999999984 5565 566 689999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-CCccc----hhhhHH-HHHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-LPWSI----MNLFGV-LKYKKMGEDF  231 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-~~~~~----~~~~~~-~k~k~~~e~~  231 (333)
                      +|...    ..+ ....+++|..++.+++++++. +++|||++||.++|+... .+..+    ...|+. ...|..+|++
T Consensus        93 ~g~~~----~~~-~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~  167 (251)
T PLN00141         93 TGFRR----SFD-PFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKY  167 (251)
T ss_pred             CCCCc----CCC-CCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHH
Confidence            98642    111 233467899999999998854 889999999999886422 11111    122332 2457788889


Q ss_pred             HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          232 VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       232 l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      +++.|+++++||||++..++...              .............+++++|+|+++++++.++...+.++.+.++
T Consensus       168 l~~~gi~~~iirpg~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~  233 (251)
T PLN00141        168 IRKSGINYTIVRPGGLTNDPPTG--------------NIVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVAR  233 (251)
T ss_pred             HHhcCCcEEEEECCCccCCCCCc--------------eEEECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecC
Confidence            99999999999999764322111              1111111122346899999999999999987766788888875


Q ss_pred             CCCCCCCCcccHHHHHHHHhcC
Q 019935          312 EGEGPGSDPQKWRELFKAAKAK  333 (333)
Q Consensus       312 ~~~~~~~~~~s~~e~~~~i~~~  333 (333)
                      .+    +...++++++..+++|
T Consensus       234 ~~----~~~~~~~~~~~~~~~~  251 (251)
T PLN00141        234 AD----APKRSYKDLFASIKQK  251 (251)
T ss_pred             CC----CCchhHHHHHHHhhcC
Confidence            44    3458999999999876

>PLN02583 cinnamoyl-CoA reductase

Probab=99.95  E-value=1e-26  Score=209.22  Aligned_cols=230  Identities=23%  Similarity=0.261  Sum_probs=160.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hhhccC--CCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ..+++||||||+||||++++++|+++|++|++++|+.++.+  ......  ...+++++.+|++|.+++. +++.++|+|
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~-~~l~~~d~v   82 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSIL-DALKGCSGL   82 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHH-HHHcCCCEE
Confidence            34578999999999999999999999999999999643221  111111  1346889999999999998 889999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccC--C---------CCCccchh-----
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKF--N---------ELPWSIMN-----  217 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~--~---------~~~~~~~~-----  217 (333)
                      +|.++....   ........+++|+.|+.++++++..  +++|||++||.+++..  .         +..+.+..     
T Consensus        83 ~~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~  159 (297)
T PLN02583         83 FCCFDPPSD---YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKF  159 (297)
T ss_pred             EEeCccCCc---ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhc
Confidence            998765321   1112345789999999999998743  5899999999876421  1         01111111     


Q ss_pred             --hhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          218 --LFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       218 --~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                        .|+  .+|..+|+++    ++.|+++++|||+.+ +||.......    ...+.  ....+  .....++|++|+|++
T Consensus       160 ~~~Y~--~sK~~aE~~~~~~~~~~gi~~v~lrp~~v-~Gp~~~~~~~----~~~~~--~~~~~--~~~~~~v~V~Dva~a  228 (297)
T PLN02583        160 KLWHA--LAKTLSEKTAWALAMDRGVNMVSINAGLL-MGPSLTQHNP----YLKGA--AQMYE--NGVLVTVDVNFLVDA  228 (297)
T ss_pred             ccHHH--HHHHHHHHHHHHHHHHhCCcEEEEcCCcc-cCCCCCCchh----hhcCC--cccCc--ccCcceEEHHHHHHH
Confidence              355  4566666655    456999999999955 7887532211    11111  11112  234579999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++.+...+ .|.+.++       ....|.++++++++
T Consensus       229 ~~~al~~~~~~~-r~~~~~~-------~~~~~~~~~~~~~~  261 (297)
T PLN02583        229 HIRAFEDVSSYG-RYLCFNH-------IVNTEEDAVKLAQM  261 (297)
T ss_pred             HHHHhcCcccCC-cEEEecC-------CCccHHHHHHHHHH
Confidence            999999876545 6888873       45567888887765

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.95  E-value=8.5e-27  Score=212.52  Aligned_cols=227  Identities=23%  Similarity=0.301  Sum_probs=165.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|+||||+||||+++++.|+++|++|++++|++++...+.    ..+++++.+|++|.+++. ++++++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~l~-~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE----GLDVEIVEGDLRDPASLR-KAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc----cCCceEEEeeCCCHHHHH-HHHhCCCEEEEeceec
Confidence            47999999999999999999999999999999876543332    346889999999999998 8899999999999854


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC--CCCc------cc---hhhhHHHHHHHHHHH
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN--ELPW------SI---MNLFGVLKYKKMGED  230 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~--~~~~------~~---~~~~~~~k~k~~~e~  230 (333)
                      ..   ....+...+++|+.++.+++++++. ++++||++||.++|+..  ..++      .+   ...|+  +.|..+|+
T Consensus        76 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~--~sK~~~e~  150 (328)
T TIGR03466        76 RL---WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYK--RSKFLAEQ  150 (328)
T ss_pred             cc---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHH--HHHHHHHH
Confidence            21   1223345788999999999998754 78999999999998742  1111      11   22344  55666665


Q ss_pred             HHH----hcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCc
Q 019935          231 FVQ----KSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGE  304 (333)
Q Consensus       231 ~l~----~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~  304 (333)
                      +++    +.|++++++||+.+ ||++....  ...+.............   +...+++|++|+|++++.+++++. .++
T Consensus       151 ~~~~~~~~~~~~~~ilR~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~-~~~  225 (328)
T TIGR03466       151 AALEMAAEKGLPVVIVNPSTP-IGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGR-IGE  225 (328)
T ss_pred             HHHHHHHhcCCCEEEEeCCcc-CCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCC-CCc
Confidence            554    35899999999955 78864321  11222222222222221   233689999999999999998754 577


Q ss_pred             EEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          305 IYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       305 ~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .|++++        +.+++.|+++.+.+
T Consensus       226 ~~~~~~--------~~~s~~e~~~~i~~  245 (328)
T TIGR03466       226 RYILGG--------ENLTLKQILDKLAE  245 (328)
T ss_pred             eEEecC--------CCcCHHHHHHHHHH
Confidence            888854        66899999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.95  E-value=1.4e-26  Score=209.93  Aligned_cols=226  Identities=15%  Similarity=0.132  Sum_probs=162.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEEEEcC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVICCT  159 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~vi~~a  159 (333)
                      ||||||+||||+++++.|+++|+ +|++++|..... .+.    ......+.+|+.+++.++ .+.    .++|+|||+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~----~~~~~~~~~d~~~~~~~~-~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL----NLADLVIADYIDKEDFLD-RLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh----hhhheeeeccCcchhHHH-HHHhhccCCCCEEEECc
Confidence            68999999999999999999997 788887754322 111    111235678888877776 554    4899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCC-------ccchhhhHHHHHHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELP-------WSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~-------~~~~~~~~~~k~k~~~e~~  231 (333)
                      +.....   ..+....+++|+.++.++++++++ ++ +||++||.++|+....+       ..+.+.|+  .+|..+|.+
T Consensus        75 ~~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~--~sK~~~e~~  148 (314)
T TIGR02197        75 ACSDTT---ETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYG--YSKFLFDQY  148 (314)
T ss_pred             cccCcc---ccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHH--HHHHHHHHH
Confidence            975421   223455778999999999998855 55 89999999999743222       22445566  556667766


Q ss_pred             HHh------cCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeec------CCCCcccccccHHHHHHHHH
Q 019935          232 VQK------SGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLM------GQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       232 l~~------~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +++      .+++++++||+.+ ||++...      .+..+...+..+..+.++      ++++..++|+|++|++++++
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~v-yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~  227 (314)
T TIGR02197       149 VRRRVLPEALSAQVVGLRYFNV-YGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNL  227 (314)
T ss_pred             HHHHhHhhccCCceEEEEEeec-cCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHH
Confidence            653      3579999999955 8887431      123334444444444333      46777899999999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++.. . .+++||++++       ..++++|+++.+.+
T Consensus       228 ~~~~~-~-~~~~yni~~~-------~~~s~~e~~~~i~~  257 (314)
T TIGR02197       228 WLLEN-G-VSGIFNLGTG-------RARSFNDLADAVFK  257 (314)
T ss_pred             HHHhc-c-cCceEEcCCC-------CCccHHHHHHHHHH
Confidence            99987 3 4579999995       67899999998865

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=6.4e-27  Score=223.05  Aligned_cols=240  Identities=21%  Similarity=0.285  Sum_probs=171.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhh-------hhhc---------cC-------CCCceEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKAT-------TLFG---------KQ-------DEETLQV  133 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~-------~~~~---------~~-------~~~~~~~  133 (333)
                      ..+++|||||||||||++|++.|++.+   .+|+++.|..+...       ++..         ..       ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            467899999999999999999999864   46899999764211       1100         00       0157899


Q ss_pred             EEccCCCcC-------CCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccc
Q 019935          134 CKGDTRNPK-------DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG  204 (333)
Q Consensus       134 v~~D~~d~~-------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~  204 (333)
                      +.+|+++++       .++ .+++++|+|||+|+...+.    .+.....++|+.|+.+++++++.  ++++||++||..
T Consensus        89 i~GDl~~~~LGLs~~~~~~-~l~~~vD~ViH~AA~v~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~  163 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLRE-EMWKEIDIVVNLAATTNFD----ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY  163 (491)
T ss_pred             EecccCCcCCCCChHHHHH-HHHhCCCEEEECccccCCc----CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence            999998543       344 5678999999999986532    23455788999999999998853  688999999999


Q ss_pred             cccCCC-----CCcc-----------------------------------------------------chhhhHHHHHHH
Q 019935          205 VTKFNE-----LPWS-----------------------------------------------------IMNLFGVLKYKK  226 (333)
Q Consensus       205 ~~~~~~-----~~~~-----------------------------------------------------~~~~~~~~k~k~  226 (333)
                      +|+...     .+++                                                     ..+.  |..+|.
T Consensus       164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~--Y~~TK~  241 (491)
T PLN02996        164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNT--YVFTKA  241 (491)
T ss_pred             EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCc--hHhhHH
Confidence            997421     1111                                                     0122  445677


Q ss_pred             HHHHHHHhc--CCCEEEEEcccccCCCCCCc---ch------HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          227 MGEDFVQKS--GLPFTIIRAGRLTDGPYTSY---DL------NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       227 ~~e~~l~~~--gi~~~~vrpg~~~~g~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|.++.++  |++++++||+.+ +|++...   +.      ..+......+.....+++++..++++|++|++++++.+
T Consensus       242 ~aE~lv~~~~~~lpv~i~RP~~V-~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a  320 (491)
T PLN02996        242 MGEMLLGNFKENLPLVIIRPTMI-TSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA  320 (491)
T ss_pred             HHHHHHHHhcCCCCEEEECCCEe-ccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence            788887653  899999999955 7876432   11      11222223334445778999999999999999999999


Q ss_pred             ccCc--c-cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          296 LDIE--F-TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       296 l~~~--~-~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +...  . ..+++||+++|..     ...+|.|+++.+.+
T Consensus       321 ~~~~~~~~~~~~vYNi~s~~~-----~~~s~~ei~~~~~~  355 (491)
T PLN02996        321 MAAHAGGQGSEIIYHVGSSLK-----NPVKFSNLHDFAYR  355 (491)
T ss_pred             HHHhhccCCCCcEEEecCCCC-----CcccHHHHHHHHHH
Confidence            8753  1 2367999998632     66899999998754

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.7e-26  Score=229.60  Aligned_cols=236  Identities=19%  Similarity=0.248  Sum_probs=167.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHH--hCCCeEEEEEcCcchh--hhhhccCCCCceEEEEccCCCcCC------CchhhhcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLL--SRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKD------LDPAIFEGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~--~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D~~d~~~------~~~~~~~~~  152 (333)
                      |+|||||||||||++|+++|+  ..|++|++++|+....  ..+.......+++++.+|++|++.      ++ + +.++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~-~-l~~~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIA-E-LGDI   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHH-H-hcCC
Confidence            479999999999999999999  5799999999965332  222111112578999999999642      22 3 3789


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccc-------hhhhHHHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSI-------MNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~-------~~~~~~~k~  224 (333)
                      |+|||+|+.....    .......++|+.++.+++++++. ++++||++||.++|+....+..+       .....|.++
T Consensus        79 D~Vih~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~s  154 (657)
T PRK07201         79 DHVVHLAAIYDLT----ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRT  154 (657)
T ss_pred             CEEEECceeecCC----CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHH
Confidence            9999999975421    22344678899999999998865 78999999999998743222111       111235577


Q ss_pred             HHHHHHHHH-hcCCCEEEEEcccccCCCCCCcc---------hHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHH
Q 019935          225 KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSYD---------LNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       225 k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |..+|++++ ..|++++++||+.+ +|+.....         +..++...... .....++.+....+++|++|++++++
T Consensus       155 K~~~E~~~~~~~g~~~~ilRp~~v-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~  233 (657)
T PRK07201        155 KFEAEKLVREECGLPWRVYRPAVV-VGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALD  233 (657)
T ss_pred             HHHHHHHHHHcCCCcEEEEcCCee-eecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHH
Confidence            888999887 46899999999955 77653211         11111111111 11223445556779999999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++..+...+++||++++       +.++|.|+++.+++
T Consensus       234 ~~~~~~~~~g~~~ni~~~-------~~~s~~el~~~i~~  265 (657)
T PRK07201        234 HLMHKDGRDGQTFHLTDP-------KPQRVGDIYNAFAR  265 (657)
T ss_pred             HHhcCcCCCCCEEEeCCC-------CCCcHHHHHHHHHH
Confidence            999876666899999984       77999999998865

>PRK05865 hypothetical protein; Provisional

Probab=99.94  E-value=3.6e-26  Score=226.31  Aligned_cols=199  Identities=18%  Similarity=0.246  Sum_probs=158.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|+||||+||||++++++|+++|++|++++|+....  .     ..+++++.+|++|.+++. ++++++|+|||+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-----~~~v~~v~gDL~D~~~l~-~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-----PSSADFIAADIRDATAVE-SAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-----ccCceEEEeeCCCHHHHH-HHHhCCCEEEECCCcc
Confidence            4799999999999999999999999999999975321  1     236788999999999998 8889999999999763


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                      .          ..+++|+.++.+++++++. ++++||++||..                    |..+|+++.++|+++++
T Consensus        73 ~----------~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------K~aaE~ll~~~gl~~vI  122 (854)
T PRK05865         73 G----------RNDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------QPRVEQMLADCGLEWVA  122 (854)
T ss_pred             c----------chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------HHHHHHHHHHcCCCEEE
Confidence            2          1568999999999998854 889999999864                    56688888889999999


Q ss_pred             EEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcc
Q 019935          242 IRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQ  321 (333)
Q Consensus       242 vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~  321 (333)
                      +||+++ ||++..    .+...+. .......++++..++|+|++|+|++++.++..+...+++||++++       +..
T Consensus       123 LRp~~V-YGP~~~----~~i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg-------~~~  189 (854)
T PRK05865        123 VRCALI-FGRNVD----NWVQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAP-------GEL  189 (854)
T ss_pred             EEeceE-eCCChH----HHHHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECC-------Ccc
Confidence            999955 888632    2222222 112223344556679999999999999998765444679999995       668


Q ss_pred             cHHHHHHHHhc
Q 019935          322 KWRELFKAAKA  332 (333)
Q Consensus       322 s~~e~~~~i~~  332 (333)
                      +++|+++.+.+
T Consensus       190 Si~EIae~l~~  200 (854)
T PRK05865        190 TFRRIAAALGR  200 (854)
T ss_pred             cHHHHHHHHhh
Confidence            99999998764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.94  E-value=9.9e-26  Score=208.31  Aligned_cols=236  Identities=21%  Similarity=0.262  Sum_probs=161.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh---hhh---ccC-----C-C-CceEEEEccCCCcC------
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT---TLF---GKQ-----D-E-ETLQVCKGDTRNPK------  142 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~---~~~---~~~-----~-~-~~~~~v~~D~~d~~------  142 (333)
                      +|||||||||||++|+++|+++|  ++|++++|+.+...   .+.   ...     . . .+++++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999865321   111   000     0 1 57899999998764      


Q ss_pred             CCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCC-------c-
Q 019935          143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELP-------W-  213 (333)
Q Consensus       143 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~-------~-  213 (333)
                      .+. .+..++|+|||||+....    ..+...+.++|+.++.++++++.. ++++||++||.++++.....       . 
T Consensus        81 ~~~-~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~  155 (367)
T TIGR01746        81 EWE-RLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIV  155 (367)
T ss_pred             HHH-HHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccc
Confidence            233 456789999999997542    122344667999999999997754 77889999999998642111       0 


Q ss_pred             --cchhhhHHHHHHHHHHHHHHh---cCCCEEEEEcccccCCCCC-C-cchHHHH-HHhhcccceeecCCCCc-cccccc
Q 019935          214 --SIMNLFGVLKYKKMGEDFVQK---SGLPFTIIRAGRLTDGPYT-S-YDLNTLL-KATAGERRAVLMGQGDK-LIGEVS  284 (333)
Q Consensus       214 --~~~~~~~~~k~k~~~e~~l~~---~gi~~~~vrpg~~~~g~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~  284 (333)
                        ......+|..+|..+|..+++   .|++++++|||.+ +|+.. + +....+. ..+........++.... ..+|++
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v-~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  234 (367)
T TIGR01746       156 TPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRI-LGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTP  234 (367)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCce-eecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCccc
Confidence              001112355667777777654   3999999999966 66522 1 1111111 22111111112333333 567999


Q ss_pred             HHHHHHHHHHhccCcccC--CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIEFTE--GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~--g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++++.++..+...  +++||++++       +..+|+|+++.+.+
T Consensus       235 vddva~ai~~~~~~~~~~~~~~~~~v~~~-------~~~s~~e~~~~i~~  277 (367)
T TIGR01746       235 VDYVARAIVALSSQPAASAGGPVFHVVNP-------EPVSLDEFLEWLER  277 (367)
T ss_pred             HHHHHHHHHHHHhCCCcccCCceEEecCC-------CCCCHHHHHHHHHH
Confidence            999999999999876532  789999984       77899999998864

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=2.5e-25  Score=202.54  Aligned_cols=237  Identities=22%  Similarity=0.271  Sum_probs=166.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      +||||||+|+||++++++|+++|++|++++|...... .........+++++.+|+.|+++++ +++.  ++|+|||+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLD-RLFEEHKIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHH-HHHHhCCCcEEEECcc
Confidence            5899999999999999999999999998876432221 1111000125778899999999988 7775  6999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ...... ........++.|+.++.+++++++. ++++||++||.++|+..       +.+..+...|+.  +|..+|.++
T Consensus        80 ~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~--sK~~~e~~~  156 (328)
T TIGR01179        80 LIAVGE-SVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGR--SKLMSERIL  156 (328)
T ss_pred             ccCcch-hhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHH--HHHHHHHHH
Confidence            764321 2233445778999999999998754 78899999999888642       223334455664  455566555


Q ss_pred             H----h-cCCCEEEEEcccccCCCCCCc-----------chHHHHHHhhc-ccceeec------CCCCcccccccHHHHH
Q 019935          233 Q----K-SGLPFTIIRAGRLTDGPYTSY-----------DLNTLLKATAG-ERRAVLM------GQGDKLIGEVSRIVVA  289 (333)
Q Consensus       233 ~----~-~gi~~~~vrpg~~~~g~~~~~-----------~~~~~~~~~~~-~~~~~~~------~~~~~~~~~i~v~Dva  289 (333)
                      +    + .+++++++||+.+ ||+....           .+..+.....+ ......+      ++++..++|+|++|+|
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNV-AGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHhccCCCEEEEecCcc-cCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            4    3 6899999999955 7764211           12222222221 2222222      3556778999999999


Q ss_pred             HHHHHhccCc--ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          290 EACIQALDIE--FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       290 ~a~~~~l~~~--~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++.++...  ...+++||++++       ..++++|+++.+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~n~~~~-------~~~s~~ei~~~~~~  273 (328)
T TIGR01179       236 DAHLAALEYLLNGGESHVYNLGYG-------QGFSVLEVIEAFKK  273 (328)
T ss_pred             HHHHHHHhhhhcCCCcceEEcCCC-------CcccHHHHHHHHHH
Confidence            9999999752  234689999985       67899999999875

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.94  E-value=8.1e-26  Score=191.13  Aligned_cols=236  Identities=22%  Similarity=0.237  Sum_probs=186.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEc---CcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLR---DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R---~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~v  155 (333)
                      ++++||||.||||++.+..+...  .++.+.++.   -.. ++.+.+....++..++++|+.+...+. ..+.  .+|.|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~-~~~~~~~id~v   84 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVL-YLFETEEIDTV   84 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHH-hhhccCchhhh
Confidence            78999999999999999999987  466666553   111 333333333788999999999988777 5553  78999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCCC--------CCccchhhhHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYK  225 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~~--------~~~~~~~~~~~~k~k  225 (333)
                      +|.|+..++. ..+.+...+...|+.++..|+++++.  ++++||++||..+||+..        ....|.++|+.+  |
T Consensus        85 ihfaa~t~vd-~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAas--K  161 (331)
T KOG0747|consen   85 IHFAAQTHVD-RSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAAS--K  161 (331)
T ss_pred             hhhHhhhhhh-hhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHH--H
Confidence            9999987754 33455566788899999999998864  689999999999999533        344667888855  5


Q ss_pred             HHHHHHH----HhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 KMGEDFV----QKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 ~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      ..+|..+    +++|++++++|.+++ |||++..  -++.|+..+....+....|+|.+.++|+|++|+++++-.+++. 
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnV-YGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-  239 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNV-YGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-  239 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCc-cCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc-
Confidence            5566444    567999999999977 8998743  2667777777788888999999999999999999999999988 


Q ss_pred             ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          300 FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       300 ~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ...|++|||+..       .+.+..|+++.|.+
T Consensus       240 g~~geIYNIgtd-------~e~~~~~l~k~i~e  265 (331)
T KOG0747|consen  240 GELGEIYNIGTD-------DEMRVIDLAKDICE  265 (331)
T ss_pred             CCccceeeccCc-------chhhHHHHHHHHHH
Confidence            556999999994       77888888887764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.94  E-value=2.2e-25  Score=199.67  Aligned_cols=237  Identities=23%  Similarity=0.270  Sum_probs=182.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ++.++|||||+||+|+||+++|++++  .+|++++..+.......+..  ....++++.+|+.|...+. .++.++ .||
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~-~a~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSIS-NAFQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhh-hhccCc-eEE
Confidence            45689999999999999999999998  89999998764221111111  1567899999999999999 899999 777


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccccc--------CCCCCccchhhhHHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK--------FNELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~--------~~~~~~~~~~~~~~~k~k~~  227 (333)
                      |+|+... +.....+....+++|+.|+.+++++|++ |++++||+||..+..        +++.|++....-.|+++|..
T Consensus        81 h~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   81 HCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            7776543 2222223566899999999999999865 999999999999864        23344442211245578888


Q ss_pred             HHHHHHhcC----CCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc-----C
Q 019935          228 GEDFVQKSG----LPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD-----I  298 (333)
Q Consensus       228 ~e~~l~~~g----i~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~-----~  298 (333)
                      +|++..+.+    +..+++||. ++|||+.....+.+...+..+......+++..+.++++++.+|.+.+.+..     .
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~-~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~  238 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPP-GIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS  238 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccc-cccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC
Confidence            998887653    889999999 669999988888888888888888888888899999999999998776654     3


Q ss_pred             cccCCcEEEecCCCCCCCCCCcccHHHHH
Q 019935          299 EFTEGEIYEINSVEGEGPGSDPQKWRELF  327 (333)
Q Consensus       299 ~~~~g~~~~v~~g~~~~~~~~~~s~~e~~  327 (333)
                      +...|+.|+|.+|++      ..+|..+.
T Consensus       239 ~~~~Gq~yfI~d~~p------~~~~~~~~  261 (361)
T KOG1430|consen  239 PSVNGQFYFITDDTP------VRFFDFLS  261 (361)
T ss_pred             CccCceEEEEeCCCc------chhhHHHH
Confidence            446799999999853      34555554

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=4.5e-25  Score=191.23  Aligned_cols=214  Identities=21%  Similarity=0.259  Sum_probs=174.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~~  161 (333)
                      +|||||++|++|++|++.|. .+++|+.++|..                   .|++|++.+. +.+.  ..|+|||+|++
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~-~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVL-EVIRETRPDVVINAAAY   60 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHH-HHHHhhCCCEEEECccc
Confidence            49999999999999999998 779999998863                   7999999999 7877  57999999999


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC-------CCccchhhhHHHHHHHHHHHHHHh
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDFVQK  234 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k~~~e~~l~~  234 (333)
                      ..+.... .+++..+.+|..|+.+++++++.-.-++|++||..++....       .+..|.+.||  ++|...|...++
T Consensus        61 t~vD~aE-~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG--~sKl~GE~~v~~  137 (281)
T COG1091          61 TAVDKAE-SEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG--RSKLAGEEAVRA  137 (281)
T ss_pred             ccccccc-CCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhh--HHHHHHHHHHHH
Confidence            8765433 33466788999999999999976345999999999976433       3356778888  778889999999


Q ss_pred             cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCC
Q 019935          235 SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGE  314 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~  314 (333)
                      .+-+..++|.+++ ||..++.....+.+....++.+..+  .++..++++..|+|+++..++......+ +||+.+    
T Consensus       138 ~~~~~~I~Rtswv-~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~~~-~yH~~~----  209 (281)
T COG1091         138 AGPRHLILRTSWV-YGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKEGG-VYHLVN----  209 (281)
T ss_pred             hCCCEEEEEeeee-ecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhccccCc-EEEEeC----
Confidence            9999999999977 6666554466667777666666554  5788899999999999999998865433 999999    


Q ss_pred             CCCCCcccHHHHHHHHhc
Q 019935          315 GPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       315 ~~~~~~~s~~e~~~~i~~  332 (333)
                         ....||-|+++.|.+
T Consensus       210 ---~g~~Swydfa~~I~~  224 (281)
T COG1091         210 ---SGECSWYEFAKAIFE  224 (281)
T ss_pred             ---CCcccHHHHHHHHHH
Confidence               466899999998864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.93  E-value=5.1e-26  Score=190.60  Aligned_cols=209  Identities=16%  Similarity=0.152  Sum_probs=153.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      ...+|.++|||||++||.+++++|++.|++|++..|+.++++++..++....+.++..|++|.++++.      +.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            34568999999999999999999999999999999999999999877644578899999999988652      334579


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |++|||||......   ...++...++++|+.|.++.++++     +++.++||++||+++..    +++..+.|+.+|+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~----~y~~~~vY~ATK~  158 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY----PYPGGAVYGATKA  158 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc----cCCCCccchhhHH
Confidence            99999999875321   223445568999999999999977     33556999999998755    5556666666654


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           ...+++.+...+++++.|.||.+...........         ........--.....++++|+|++++++++.|
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~---------g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE---------GDDERADKVYKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC---------chhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence                 4556666777899999999995522111110000         00000000012235789999999999999998


Q ss_pred             c
Q 019935          300 F  300 (333)
Q Consensus       300 ~  300 (333)
                      .
T Consensus       230 ~  230 (246)
T COG4221         230 Q  230 (246)
T ss_pred             C
Confidence            5

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.93  E-value=4.3e-25  Score=197.58  Aligned_cols=202  Identities=15%  Similarity=0.169  Sum_probs=151.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh------cC-CcEEE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF------EG-VTHVI  156 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~------~~-~d~vi  156 (333)
                      +||||||||++|++++++|++.|++|++++|++++..       ..+++.+.+|+.|++++. .++      .+ +|.|+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~-~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWD-NPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHH-HHHhcccCcCCceeEEE
Confidence            4899999999999999999999999999999987542       346777889999999998 777      57 99999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~  235 (333)
                      |+++...              -......+++++++ .|++|||++||..++...             ..+..+++++++.
T Consensus        73 ~~~~~~~--------------~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------~~~~~~~~~l~~~  125 (285)
T TIGR03649        73 LVAPPIP--------------DLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------PAMGQVHAHLDSL  125 (285)
T ss_pred             EeCCCCC--------------ChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------chHHHHHHHHHhc
Confidence            9986421              01245678888775 499999999997664210             0123456788775


Q ss_pred             -CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCC
Q 019935          236 -GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGE  314 (333)
Q Consensus       236 -gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~  314 (333)
                       |++++++||++++ +.....   .+...+..... ...+.++...+|++++|+|++++.++.++...++.|++.+    
T Consensus       126 ~gi~~tilRp~~f~-~~~~~~---~~~~~~~~~~~-~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g----  196 (285)
T TIGR03649       126 GGVEYTVLRPTWFM-ENFSEE---FHVEAIRKENK-IYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLG----  196 (285)
T ss_pred             cCCCEEEEeccHHh-hhhccc---ccccccccCCe-EEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeC----
Confidence             9999999999664 222111   01111222222 3345677889999999999999999998766678899988    


Q ss_pred             CCCCCcccHHHHHHHHhc
Q 019935          315 GPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       315 ~~~~~~~s~~e~~~~i~~  332 (333)
                         ++.++++|+++.+++
T Consensus       197 ---~~~~s~~eia~~l~~  211 (285)
T TIGR03649       197 ---PELLTYDDVAEILSR  211 (285)
T ss_pred             ---CccCCHHHHHHHHHH
Confidence               488999999999875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.93  E-value=6.6e-25  Score=196.82  Aligned_cols=224  Identities=19%  Similarity=0.232  Sum_probs=151.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF  164 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~  164 (333)
                      ||||||+||||+++++.|+++|++|++++|++.+.....    ...    ..|+.. ..+. ..+.++|+|||+|+....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~----~~~~~~-~~~~-~~~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----WEG----YKPWAP-LAES-EALEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----cee----eecccc-cchh-hhcCCCCEEEECCCCCcc
Confidence            689999999999999999999999999999876543321    111    113222 3444 567899999999986432


Q ss_pred             CCCCCC--CCCCCcchhHHHHHHHHHhcCC-CCC--eEEEEeccccccCCC-CCcc------chhhhHHHHHHHHHHHH-
Q 019935          165 PSRRWD--GDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVSSVGVTKFNE-LPWS------IMNLFGVLKYKKMGEDF-  231 (333)
Q Consensus       165 ~~~~~~--~~~~~~~~n~~~~~~l~~a~~~-~~~--~~v~~SS~~~~~~~~-~~~~------~~~~~~~~k~k~~~e~~-  231 (333)
                      . ..+.  ....++++|+.++.+++++++. +++  +||++|+.++|+... .++.      +.+.++  +.+...|+. 
T Consensus        71 ~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~--~~~~~~e~~~  147 (292)
T TIGR01777        71 D-KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLA--ELCRDWEEAA  147 (292)
T ss_pred             c-ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHH--HHHHHHHHHh
Confidence            1 1121  2234678899999999998854 653  566777777777422 1221      222233  233333333 


Q ss_pred             --HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          232 --VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       232 --l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                        +++.+++++++||+.+ ||+..+ ....+........ ...+++++..++|+|++|+|++++.++.++.. +.+||++
T Consensus       148 ~~~~~~~~~~~ilR~~~v-~G~~~~-~~~~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~-~g~~~~~  223 (292)
T TIGR01777       148 QAAEDLGTRVVLLRTGIV-LGPKGG-ALAKMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENASI-SGPVNAT  223 (292)
T ss_pred             hhchhcCCceEEEeeeeE-ECCCcc-hhHHHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCccc-CCceEec
Confidence              3456899999999955 788643 2333332222111 11257788899999999999999999988654 4589999


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++       +.+++.|+++.+++
T Consensus       224 ~~-------~~~s~~di~~~i~~  239 (292)
T TIGR01777       224 AP-------EPVRNKEFAKALAR  239 (292)
T ss_pred             CC-------CccCHHHHHHHHHH
Confidence            84       77999999999865

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=2e-24  Score=180.51  Aligned_cols=179  Identities=29%  Similarity=0.431  Sum_probs=142.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF  164 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~  164 (333)
                      |+|+||||++|++++++|+++|++|++++|++++.+.      ..+++++.+|+.|++++. +++.++|+||++++... 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~-~al~~~d~vi~~~~~~~-   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVK-AALKGADAVIHAAGPPP-   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHH-HHHTTSSEEEECCHSTT-
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhh-hhhhhcchhhhhhhhhc-
Confidence            7999999999999999999999999999999887765      568999999999999999 89999999999997642 


Q ss_pred             CCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCcc---chhhhHHHHHHHHHHHHHHhcCCCEE
Q 019935          165 PSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWS---IMNLFGVLKYKKMGEDFVQKSGLPFT  240 (333)
Q Consensus       165 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~---~~~~~~~~k~k~~~e~~l~~~gi~~~  240 (333)
                           .        +...+.+++++++. +++|||++|+.+++......+.   ......+...+..+|+.+++.+++|+
T Consensus        73 -----~--------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  139 (183)
T PF13460_consen   73 -----K--------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWT  139 (183)
T ss_dssp             -----T--------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEE
T ss_pred             -----c--------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEE
Confidence                 0        37888999998854 8999999999999885443221   11223466778889999999999999


Q ss_pred             EEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          241 IIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       241 ~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      ++||+.++.++...              .......+.....+|+++|+|+++++++++
T Consensus       140 ivrp~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  140 IVRPGWIYGNPSRS--------------YRLIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EEEESEEEBTTSSS--------------EEEESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             EEECcEeEeCCCcc--------------eeEEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            99999765433211              111112445566999999999999999864

...

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.93  E-value=6.1e-26  Score=202.62  Aligned_cols=217  Identities=19%  Similarity=0.231  Sum_probs=153.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+||||||+|+||++|++.|.+.|++|+.+.|+                   ..|++|.+.+. +.+.  ..|+|||+|+
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~-~~~~~~~pd~Vin~aa   60 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVA-KLLEAFKPDVVINCAA   60 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHH-HHHHHH--SEEEE---
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHH-HHHHHhCCCeEeccce
Confidence            589999999999999999999999999999776                   46899988888 6665  5899999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ...... -...++..+.+|+.++.+|+++++....++||+||..+|...       +.+..|.+.||  +.|..+|+.++
T Consensus        61 ~~~~~~-ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG--~~K~~~E~~v~  137 (286)
T PF04321_consen   61 YTNVDA-CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG--RSKLEGEQAVR  137 (286)
T ss_dssp             ---HHH-HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH--HHHHHHHHHHH
T ss_pred             eecHHh-hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHH--HHHHHHHHHHH
Confidence            754211 112345578899999999999886533599999999998532       23445567777  66788999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc---CCcEEEecC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT---EGEIYEINS  310 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~---~g~~~~v~~  310 (333)
                      +..-++.|+|++++ ||+........+...+..++.+..+  .+..+++++++|+|+++..++++...   ...+||+++
T Consensus       138 ~~~~~~~IlR~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~  214 (286)
T PF04321_consen  138 AACPNALILRTSWV-YGPSGRNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSG  214 (286)
T ss_dssp             HH-SSEEEEEE-SE-ESSSSSSHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---
T ss_pred             HhcCCEEEEeccee-cccCCCchhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEec
Confidence            86669999999966 7775544455666666656655554  36788999999999999999988542   356999999


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                             ++.++|.|+++.+.+
T Consensus       215 -------~~~~S~~e~~~~i~~  229 (286)
T PF04321_consen  215 -------PERVSRYEFAEAIAK  229 (286)
T ss_dssp             -------BS-EEHHHHHHHHHH
T ss_pred             -------CcccCHHHHHHHHHH
Confidence                   488999999998875

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.92  E-value=1.4e-24  Score=200.75  Aligned_cols=231  Identities=25%  Similarity=0.312  Sum_probs=186.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhcC--
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEG--  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~~--  151 (333)
                      ...+|+||||||+|.||+.+++++++.+ .++++++|++-+...+..+.    +..++.++-||+.|.+.++ .++++  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~-~~~~~~k  325 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVE-RAMEGHK  325 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHH-HHHhcCC
Confidence            4578999999999999999999999997 57899999987765443222    2467888999999999999 89997  


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGED  230 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~  230 (333)
                      +|+|||+|+.-++|.....+ .+..++|+.|+.|+++||. .++++||++||..+.       +|.+.||.+  |+.+|.
T Consensus       326 vd~VfHAAA~KHVPl~E~nP-~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV-------~PtNvmGaT--Kr~aE~  395 (588)
T COG1086         326 VDIVFHAAALKHVPLVEYNP-EEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAV-------NPTNVMGAT--KRLAEK  395 (588)
T ss_pred             CceEEEhhhhccCcchhcCH-HHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCccc-------CCchHhhHH--HHHHHH
Confidence            99999999999988655444 5578899999999999884 599999999998763       567788855  677776


Q ss_pred             HHHhc-------CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCC
Q 019935          231 FVQKS-------GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG  303 (333)
Q Consensus       231 ~l~~~-------gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g  303 (333)
                      ++...       +.++.+||.|+++ |.+++ ..+.|.+.+..+ .+..+.+++-.+-|++++|.++.++.+.... ..|
T Consensus       396 ~~~a~~~~~~~~~T~f~~VRFGNVl-GSrGS-ViPlFk~QI~~G-gplTvTdp~mtRyfMTI~EAv~LVlqA~a~~-~gG  471 (588)
T COG1086         396 LFQAANRNVSGTGTRFCVVRFGNVL-GSRGS-VIPLFKKQIAEG-GPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA-KGG  471 (588)
T ss_pred             HHHHHhhccCCCCcEEEEEEeccee-cCCCC-CHHHHHHHHHcC-CCccccCCCceeEEEEHHHHHHHHHHHHhhc-CCC
Confidence            66432       3789999999986 44444 267777777766 4445567788889999999999999999874 458


Q ss_pred             cEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          304 EIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       304 ~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      ++|.+.-|       +++.+.|+++.+.
T Consensus       472 eifvldMG-------epvkI~dLAk~mi  492 (588)
T COG1086         472 EIFVLDMG-------EPVKIIDLAKAMI  492 (588)
T ss_pred             cEEEEcCC-------CCeEHHHHHHHHH
Confidence            99999998       6688888888763

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.92  E-value=6.2e-25  Score=189.31  Aligned_cols=202  Identities=18%  Similarity=0.228  Sum_probs=157.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ..++++++|||||++||.++++.|+++|++|+++.|+.+++.++..++.   +-.++++.+|++|++++. .+..     
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~-~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALE-RLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHH-HHHHHHHhc
Confidence            4567899999999999999999999999999999999999888765543   345789999999999888 5442     


Q ss_pred             --CCcEEEEcCCCCCC---CCCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAF---PSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        .+|++|||||....   .+.+|++..+++++|+.+...|..++     +++.++||+++|.+++-    |.+..+.|+
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~----p~p~~avY~  157 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI----PTPYMAVYS  157 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC----CCcchHHHH
Confidence              69999999998763   34567777889999999999999866     34667999999999987    556667787


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|+     ...++.+|+..|+++++|+||.+ ....        .+ ..+...    .......-+++++|+|+..+..
T Consensus       158 ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~-~T~f--------~~-~~~~~~----~~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         158 ATKAFVLSFSEALREELKGTGVKVTAVCPGPT-RTEF--------FD-AKGSDV----YLLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEecCcc-cccc--------cc-cccccc----ccccchhhccCHHHHHHHHHHH
Confidence            7774     46777888899999999999966 2211        11 000000    0111234689999999999999


Q ss_pred             ccCc
Q 019935          296 LDIE  299 (333)
Q Consensus       296 l~~~  299 (333)
                      +...
T Consensus       224 l~~~  227 (265)
T COG0300         224 LEKG  227 (265)
T ss_pred             HhcC
Confidence            9874

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.92  E-value=1.4e-25  Score=195.42  Aligned_cols=225  Identities=24%  Similarity=0.290  Sum_probs=159.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccC----CCCceE----EEEccCCCcCCCchhhhc--CCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQ----DEETLQ----VCKGDTRNPKDLDPAIFE--GVT  153 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~----~~~~~~----~v~~D~~d~~~~~~~~~~--~~d  153 (333)
                      ||||||+|.||+.|+++|++.+ .++++++|++.+.-.+....    ...++.    .+.+|++|.+.+. .+|+  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~-~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLN-RIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHH-HHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHH-HHHhhcCCC
Confidence            7999999999999999999998 68999999998876654433    233443    4589999999999 8888  899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHH
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      +|||+|+.-+++... ..+.+..++|+.|+.|+++++ +.++++||++||..+.       +|.+.||  .+|+.+|.++
T Consensus        80 iVfHaAA~KhVpl~E-~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv-------~PtnvmG--atKrlaE~l~  149 (293)
T PF02719_consen   80 IVFHAAALKHVPLME-DNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV-------NPTNVMG--ATKRLAEKLV  149 (293)
T ss_dssp             EEEE------HHHHC-CCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS-------S--SHHH--HHHHHHHHHH
T ss_pred             EEEEChhcCCCChHH-hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC-------CCCcHHH--HHHHHHHHHH
Confidence            999999998866433 334557889999999999977 5599999999999874       3667788  5588899888


Q ss_pred             Hhc-------CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcE
Q 019935          233 QKS-------GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEI  305 (333)
Q Consensus       233 ~~~-------gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~  305 (333)
                      ...       +.++++||.|++++ .+++ .++.|.+.+..+.++ .+.+.+..+-|++++|.++.++.++... ..|++
T Consensus       150 ~~~~~~~~~~~t~f~~VRFGNVlg-S~GS-Vip~F~~Qi~~g~Pl-TvT~p~mtRffmti~EAv~Lvl~a~~~~-~~gei  225 (293)
T PF02719_consen  150 QAANQYSGNSDTKFSSVRFGNVLG-SRGS-VIPLFKKQIKNGGPL-TVTDPDMTRFFMTIEEAVQLVLQAAALA-KGGEI  225 (293)
T ss_dssp             HHHCCTSSSS--EEEEEEE-EETT-GTTS-CHHHHHHHHHTTSSE-EECETT-EEEEE-HHHHHHHHHHHHHH---TTEE
T ss_pred             HHHhhhCCCCCcEEEEEEecceec-CCCc-HHHHHHHHHHcCCcc-eeCCCCcEEEEecHHHHHHHHHHHHhhC-CCCcE
Confidence            643       46899999998864 4443 377787777766554 4456777888999999999999999874 35889


Q ss_pred             EEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          306 YEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       306 ~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      |.+.-|       .++.+.|+++.+.
T Consensus       226 fvl~mg-------~~v~I~dlA~~~i  244 (293)
T PF02719_consen  226 FVLDMG-------EPVKILDLAEAMI  244 (293)
T ss_dssp             EEE----------TCEECCCHHHHHH
T ss_pred             EEecCC-------CCcCHHHHHHHHH
Confidence            999987       4467777776653

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=3e-24  Score=185.79  Aligned_cols=239  Identities=22%  Similarity=0.272  Sum_probs=173.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc----chhhhhhccC-CCCceEEEEccCCCcCCCchhhhc--CCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE--GVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~----~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~--~~d~  154 (333)
                      .++||||||+||||+|.+.+|++.|++|++++.-.    .......... +..++.++++|++|.+.++ ++|+  ..|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~-kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALE-KLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHH-HHHhhcCCce
Confidence            46899999999999999999999999999998522    1222221111 1478999999999999999 8887  6899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCcc-chhhhHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWS-IMNLFGVLKYK  225 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~-~~~~~~~~k~k  225 (333)
                      |+|.|+...+... ...+..++..|+.|+.++++++++ +++.+||.||+.+||..       +.+.. +.++||  +.|
T Consensus        81 V~Hfa~~~~vgeS-~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg--~tK  157 (343)
T KOG1371|consen   81 VMHFAALAAVGES-MENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYG--KTK  157 (343)
T ss_pred             EEeehhhhccchh-hhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcch--hhh
Confidence            9999998775533 444577899999999999998865 89999999999999953       33444 778888  567


Q ss_pred             HHHHHHHHh----cCCCEEEEEcccccCC--CCCCc---------c-hHHHHHHhhccc-ceee------cCCCCccccc
Q 019935          226 KMGEDFVQK----SGLPFTIIRAGRLTDG--PYTSY---------D-LNTLLKATAGER-RAVL------MGQGDKLIGE  282 (333)
Q Consensus       226 ~~~e~~l~~----~gi~~~~vrpg~~~~g--~~~~~---------~-~~~~~~~~~~~~-~~~~------~~~~~~~~~~  282 (333)
                      ..+|+.+..    .+..++.+|.... +|  |.+..         + ++.....+.+.. ....      ..+++..++.
T Consensus       158 ~~iE~i~~d~~~~~~~~~~~LRyfn~-~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy  236 (343)
T KOG1371|consen  158 KAIEEIIHDYNKAYGWKVTGLRYFNV-IGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY  236 (343)
T ss_pred             HHHHHHHHhhhccccceEEEEEeccc-cCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence            777777754    4678888998766 34  22210         0 111112222111 1111      2355888999


Q ss_pred             ccHHHHHHHHHHhccCccc--CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          283 VSRIVVAEACIQALDIEFT--EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       283 i~v~Dva~a~~~~l~~~~~--~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +|+-|+|+..+.++.....  .-.+||+++|.+       .+..+|+.++++
T Consensus       237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g-------~~V~~lv~a~~k  281 (343)
T KOG1371|consen  237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKG-------SSVLELVTAFEK  281 (343)
T ss_pred             eeeEehHHHHHHHhhccccchheeeEeecCCCC-------ccHHHHHHHHHH
Confidence            9999999999999987542  234999999755       457888877765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-24  Score=191.39  Aligned_cols=227  Identities=11%  Similarity=0.077  Sum_probs=150.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      .++++++|||||+|+||+++++.|+++|++|++++|++++.++......  +.++.++++|++|++.++ ++++      
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   82 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVN-AGIDKVAERF   82 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            3557899999999999999999999999999999999866554432221  345788999999998887 4443      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHH----HHHhc-CC-CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRN----LVSAL-PS-SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~----l~~a~-~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       ++|+||||||......   ..++.....+++|+.+...    +++++ +. +.++||++||...+.    +......|+
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~y~  158 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE----ASPLKSAYV  158 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC----CCCCCcccH
Confidence             5899999999754211   1222233456789999444    55544 43 678999999987654    223334566


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-c--ccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-G--ERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|..     +.....+...++++++++||.+ +++.....+........ .  ......+..+....+|++++|+++++
T Consensus       159 ~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~  237 (262)
T PRK13394        159 TAKHGLLGLARVLAKEGAKHNVRSHVVCPGFV-RTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTV  237 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc-cchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            55532     1122223446899999999954 66643211111111000 0  00001223345567899999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +.++..+.  ..|+.|++++|
T Consensus       238 ~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        238 LFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             HHHcCccccCCcCCEEeeCCc
Confidence            99998653  34889999986

>PLN02778 3,5-epimerase/4-reductase

Probab=99.92  E-value=1.3e-23  Score=188.96  Aligned_cols=209  Identities=15%  Similarity=0.131  Sum_probs=142.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~  158 (333)
                      +.|+||||||+||||++|++.|+++|++|++..+                      |+.|.+.+. ..+.  ++|+|||+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~----------------------~~~~~~~v~-~~l~~~~~D~ViH~   64 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG----------------------RLENRASLE-ADIDAVKPTHVFNA   64 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC----------------------ccCCHHHHH-HHHHhcCCCEEEEC
Confidence            4468999999999999999999999999875422                      223333333 3333  68999999


Q ss_pred             CCCCCCCCCC--CCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------------C-CCccchhhhHH
Q 019935          159 TGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------------E-LPWSIMNLFGV  221 (333)
Q Consensus       159 a~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------------~-~~~~~~~~~~~  221 (333)
                      ||..+.+...  ...+...+++|+.++.+++++++. ++++ +++||.++|+..             + .+..+.+.|+ 
T Consensus        65 Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg-  142 (298)
T PLN02778         65 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYS-  142 (298)
T ss_pred             CcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchH-
Confidence            9987532211  234456788999999999998865 7764 556666665421             1 1112234565 


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          222 LKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       222 ~k~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                       .+|..+|.+++.+. +..++|++.. +++... ....++..+.........+     .+++|++|++++++.++.... 
T Consensus       143 -~sK~~~E~~~~~y~-~~~~lr~~~~-~~~~~~-~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~-  212 (298)
T PLN02778        143 -KTKAMVEELLKNYE-NVCTLRVRMP-ISSDLS-NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL-  212 (298)
T ss_pred             -HHHHHHHHHHHHhh-ccEEeeeccc-CCcccc-cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC-
Confidence             67888998887763 6778888743 444322 1223455555444443332     379999999999999997643 


Q ss_pred             CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          302 EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       302 ~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                       +++||++++       ..+++.|+++.+++
T Consensus       213 -~g~yNigs~-------~~iS~~el~~~i~~  235 (298)
T PLN02778        213 -TGIYNFTNP-------GVVSHNEILEMYRD  235 (298)
T ss_pred             -CCeEEeCCC-------CcccHHHHHHHHHH
Confidence             359999885       67999999998765

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-24  Score=192.45  Aligned_cols=231  Identities=15%  Similarity=0.122  Sum_probs=157.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      ++++||||||+|+||++++++|+++|++|++++|++++.+.+.... ...+.++.+|++|+++++ +++       .++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVTDRAAVF-AAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCCCHHHHH-HHHHHHHHHcCCCC
Confidence            4578999999999999999999999999999999987766554332 346788899999998876 443       3689


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||......   ..++.....+++|+.++.++++++     +.+.++||++||.+++.    +......|+.+|..
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~~sKaa  155 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS----AFPMSGIYHASKWA  155 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC----CCCCccHHHHHHHH
Confidence            9999999764211   122334456789999998888864     33678999999988875    33444567766642


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhhcccceeecCCCCccccc-ccHHHHHHHHH
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATAGERRAVLMGQGDKLIGE-VSRIVVAEACI  293 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~a~~  293 (333)
                           +.+...+..+|+++++++||.+ .++.....      ...+.....      .+........+ ++++|+|++++
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~p~dva~~~~  228 (275)
T PRK08263        156 LEGMSEALAQEVAEFGIKVTLVEPGGY-STDWAGTSAKRATPLDAYDTLRE------ELAEQWSERSVDGDPEAAAEALL  228 (275)
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEecCCc-cCCccccccccCCCchhhhhHHH------HHHHHHHhccCCCCHHHHHHHHH
Confidence                 2223334557999999999955 44432100      111111000      01111122345 89999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      .+++.+...++ |.+.++      +..+++.++.+.+.
T Consensus       229 ~l~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~  259 (275)
T PRK08263        229 KLVDAENPPLR-LFLGSG------VLDLAKADYERRLA  259 (275)
T ss_pred             HHHcCCCCCeE-EEeCch------HHHHHHHHHHHHHH
Confidence            99998765455 444432      36688888887765

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.91  E-value=1e-23  Score=184.89  Aligned_cols=201  Identities=24%  Similarity=0.297  Sum_probs=116.9

Q ss_pred             EEcCCChHHHHHHHHHHhCCC--eEEEEEcCcch---hhhhhccC------------CCCceEEEEccCCCcC------C
Q 019935           87 VAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEK---ATTLFGKQ------------DEETLQVCKGDTRNPK------D  143 (333)
Q Consensus        87 VtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~---~~~~~~~~------------~~~~~~~v~~D~~d~~------~  143 (333)
                      |||||||+|++|+++|++.+.  +|+|++|..+.   .+.+....            ...+++++.||++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  99999998643   22221111            1578999999999865      2


Q ss_pred             CchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCc---------
Q 019935          144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPW---------  213 (333)
Q Consensus       144 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~---------  213 (333)
                      +. .+.+.+|+|||||+...+    ..+....+++|+.|+.++++.+.. ..++|+|+||..+.+......         
T Consensus        81 ~~-~L~~~v~~IiH~Aa~v~~----~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~  155 (249)
T PF07993_consen   81 YQ-ELAEEVDVIIHCAASVNF----NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEE  155 (249)
T ss_dssp             HH-HHHHH--EEEE--SS-SB----S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH-
T ss_pred             hh-ccccccceeeecchhhhh----cccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCccccccccccc
Confidence            33 455789999999998753    234556889999999999997764 566999999955544322111         


Q ss_pred             -----cchhhhHHHHHHHHHHHHHHhc----CCCEEEEEcccccCCCCCCc----c-hHHHHHHhhc-ccceeecCCCCc
Q 019935          214 -----SIMNLFGVLKYKKMGEDFVQKS----GLPFTIIRAGRLTDGPYTSY----D-LNTLLKATAG-ERRAVLMGQGDK  278 (333)
Q Consensus       214 -----~~~~~~~~~k~k~~~e~~l~~~----gi~~~~vrpg~~~~g~~~~~----~-~~~~~~~~~~-~~~~~~~~~~~~  278 (333)
                           ......+|.++|+.+|+++++.    |++++++|||.++..+.++.    . +..++..... +......++.+.
T Consensus       156 ~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  235 (249)
T PF07993_consen  156 DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDA  235 (249)
T ss_dssp             -EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---T
T ss_pred             ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCc
Confidence                 1122347888999999888653    99999999997654344321    1 2222222222 222234455556


Q ss_pred             ccccccHHHHHHHH
Q 019935          279 LIGEVSRIVVAEAC  292 (333)
Q Consensus       279 ~~~~i~v~Dva~a~  292 (333)
                      ..+++++|.+|++|
T Consensus       236 ~~d~vPVD~va~aI  249 (249)
T PF07993_consen  236 RLDLVPVDYVARAI  249 (249)
T ss_dssp             T--EEEHHHHHHHH
T ss_pred             eEeEECHHHHHhhC
Confidence            78999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-23  Score=187.63  Aligned_cols=221  Identities=15%  Similarity=0.111  Sum_probs=149.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.+..++......  +.++.++.+|++|+++++ +++       
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   81 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVT-HLADEAFRLL   81 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH-HHHHHHHHHc
Confidence            4567899999999999999999999999999999998766654432221  345788999999999887 444       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|+||||||......   ...+.....+++|+.+..++++++     +.+ .++||++||..++.    +......|+
T Consensus        82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  157 (275)
T PRK05876         82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV----PNAGLGAYG  157 (275)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc----CCCCCchHH
Confidence            36899999999754211   111223345689999999999875     233 47899999998875    445556777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHH-hhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA-TAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++.... ....... .........++......++++++|+|++++.
T Consensus       158 asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (275)
T PRK05876        158 VAKYGVVGLAETLAREVTADGIGVSVLCPMVV-ETNLVAN-SERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD  235 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcc-ccccccc-hhhhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence            7664     23333445567999999999954 5554221 1000000 0001111122333345678999999999999


Q ss_pred             hccCcccCCcEEEecC
Q 019935          295 ALDIEFTEGEIYEINS  310 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~  310 (333)
                      ++...    +.+.+.+
T Consensus       236 ai~~~----~~~~~~~  247 (275)
T PRK05876        236 AILAN----RLYVLPH  247 (275)
T ss_pred             HHHcC----CeEEecC
Confidence            99763    4455543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.1e-24  Score=189.78  Aligned_cols=226  Identities=20%  Similarity=0.203  Sum_probs=153.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      .|++|||||+|+||++++++|+++|++|++++|+++..+.+.... ..++.++.+|++|.+++. +++       .++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVTDSAAVR-AVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCCCHHHHH-HHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999987766554332 347889999999998877 443       36899


Q ss_pred             EEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      ||||||.......   .++.....+++|+.++.++++++    + .+.++||++||.+...    +....+.|+.+|.. 
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~  155 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI----AYPGFSLYHATKWGI  155 (276)
T ss_pred             EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc----CCCCCchhHHHHHHH
Confidence            9999997642211   11223346778999999999975    3 3678999999987643    34455677766643 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEccccc--CCCCCCcc----------hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLT--DGPYTSYD----------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~--~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                          +...+.+..+|++++++|||.+.  +++.....          ...+.+..         ..+ ...-+.+++|++
T Consensus       156 ~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~d~~~~~  225 (276)
T PRK06482        156 EGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL---------ADG-SFAIPGDPQKMV  225 (276)
T ss_pred             HHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH---------hhc-cCCCCCCHHHHH
Confidence                12223334469999999999652  22211100          00011111         111 112246899999


Q ss_pred             HHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          290 EACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       290 ~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      ++++.++..+.. +..|+++++       ...+..|+++.+.
T Consensus       226 ~a~~~~~~~~~~-~~~~~~g~~-------~~~~~~~~~~~~~  259 (276)
T PRK06482        226 QAMIASADQTPA-PRRLTLGSD-------AYASIRAALSERL  259 (276)
T ss_pred             HHHHHHHcCCCC-CeEEecChH-------HHHHHHHHHHHHH
Confidence            999999986543 567999986       4456666655443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=185.26  Aligned_cols=227  Identities=13%  Similarity=0.133  Sum_probs=156.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .++++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.... ..++.++.+|++|+++++ +++       .+
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   80 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDVTRQDSID-RIVAAAVERFGG   80 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            456789999999999999999999999999999999987766554332 346888999999998887 444       36


Q ss_pred             CcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcCC------CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~------~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|+||||||.....   ...++.....+++|+.+..++++++..      ..++||++||.....    +..+...|+.+
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  156 (257)
T PRK07067         81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR----GEALVSHYCAT  156 (257)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC----CCCCCchhhhh
Confidence            89999999975421   112233445688999999999997621      125899999976543    23344567665


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh--hcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT--AGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.+...+...|+++++|+||.+ +++........+....  ........++...+..++++++|+|++++++
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  235 (257)
T PRK07067        157 KAAVISYTQSAALALIRHGINVNAIAPGVV-DTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFL  235 (257)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCcc-cchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence            542     2233344467999999999954 6664221110000000  0001111234445667899999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      +..+.  ..|++|++++|+
T Consensus       236 ~s~~~~~~~g~~~~v~gg~  254 (257)
T PRK07067        236 ASADADYIVAQTYNVDGGN  254 (257)
T ss_pred             hCcccccccCcEEeecCCE
Confidence            98754  358999999873

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.91  E-value=1.9e-23  Score=200.96  Aligned_cols=241  Identities=21%  Similarity=0.248  Sum_probs=166.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchh---hhhh----c---------cC-------CCCceEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKA---TTLF----G---------KQ-------DEETLQV  133 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~---~~~~----~---------~~-------~~~~~~~  133 (333)
                      ..+++|||||||||||++|++.|++.+.   +|+++.|..+..   +.+.    .         ..       ...++++
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            3679999999999999999999998753   689999965322   1111    0         00       0346889


Q ss_pred             EEccCCCcC------CCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEecccc
Q 019935          134 CKGDTRNPK------DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGV  205 (333)
Q Consensus       134 v~~D~~d~~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~  205 (333)
                      +.+|+++++      ..+ .+.+++|+|||+|+...+.    .+.....++|+.|+.+++++++.  .+++||++||..+
T Consensus       197 v~GDl~d~~LGLs~~~~~-~L~~~vDiVIH~AA~v~f~----~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV  271 (605)
T PLN02503        197 VVGNVCESNLGLEPDLAD-EIAKEVDVIINSAANTTFD----ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV  271 (605)
T ss_pred             EEeeCCCcccCCCHHHHH-HHHhcCCEEEECccccccc----cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence            999999974      333 4557899999999986532    23455788999999999998843  5789999999999


Q ss_pred             ccCCC-----CCcc-----------------------c-----------h------------------------hhhHHH
Q 019935          206 TKFNE-----LPWS-----------------------I-----------M------------------------NLFGVL  222 (333)
Q Consensus       206 ~~~~~-----~~~~-----------------------~-----------~------------------------~~~~~~  222 (333)
                      |+...     .++.                       .           .                        -+..|+
T Consensus       272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt  351 (605)
T PLN02503        272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV  351 (605)
T ss_pred             ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence            88532     1111                       0           0                        002255


Q ss_pred             HHHHHHHHHHHhc--CCCEEEEEcccccC-------CCCCC--cchHHHHHHhhcccc-eeecCCCCcccccccHHHHHH
Q 019935          223 KYKKMGEDFVQKS--GLPFTIIRAGRLTD-------GPYTS--YDLNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       223 k~k~~~e~~l~~~--gi~~~~vrpg~~~~-------g~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ..|..+|+.+.+.  +++++++||+.+..       |+..+  ...+.+...  +... ...+++++...+.|++|.+++
T Consensus       352 ~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~--g~G~lr~~~~~~~~~~DiVPVD~vvn  429 (605)
T PLN02503        352 FTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY--GKGQLTGFLADPNGVLDVVPADMVVN  429 (605)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhhe--eccceeEEEeCCCeeEeEEeecHHHH
Confidence            6688899888765  79999999995521       11111  112222111  2222 236688899999999999999


Q ss_pred             HHHHhccC-c---ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          291 ACIQALDI-E---FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       291 a~~~~l~~-~---~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.++.. .   ...+++||++++..     ++++|.|+++.+.+
T Consensus       430 a~i~a~a~~~~~~~~~~~vYn~ts~~~-----nP~t~~~~~~~~~~  470 (605)
T PLN02503        430 ATLAAMAKHGGAAKPEINVYQIASSVV-----NPLVFQDLARLLYE  470 (605)
T ss_pred             HHHHHHHhhhcccCCCCCEEEeCCCCC-----CCeEHHHHHHHHHH
Confidence            99998432 1   12368999998543     78999999998754

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.90  E-value=2.8e-23  Score=176.03  Aligned_cols=224  Identities=20%  Similarity=0.258  Sum_probs=153.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-CCcEEEEcCCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGTTA  163 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-~~d~vi~~a~~~~  163 (333)
                      |+||||||+||++|+..|.+.||+|++++|++.+.....    ...+.       .-+.+. .... ++|+|||+||..-
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----~~~v~-------~~~~~~-~~~~~~~DavINLAG~~I   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----HPNVT-------LWEGLA-DALTLGIDAVINLAGEPI   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----Ccccc-------ccchhh-hcccCCCCEEEECCCCcc
Confidence            689999999999999999999999999999987765443    22222       112233 2333 7999999999754


Q ss_pred             CCCCCCCC--CCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCCC-CCccchhhhHHH---HHHHHHHH---H
Q 019935          164 FPSRRWDG--DNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNE-LPWSIMNLFGVL---KYKKMGED---F  231 (333)
Q Consensus       164 ~~~~~~~~--~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~~-~~~~~~~~~~~~---k~k~~~e~---~  231 (333)
                      . ...|.+  .+...+--+..|..|.+++.   ...+.+|.-|.++-||+.. ..+.+.+++|-.   +....=|+   .
T Consensus        69 ~-~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~  147 (297)
T COG1090          69 A-ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQ  147 (297)
T ss_pred             c-cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhh
Confidence            2 233443  23345556788888888663   3667888888888898543 344444444411   21111121   1


Q ss_pred             HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          232 VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       232 l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      ....|.|++.+|.|.++ ++.++. +..+..... ..---.+|+|.++++|||++|+++++.++++++...| .||++. 
T Consensus       148 a~~~gtRvvllRtGvVL-s~~GGa-L~~m~~~fk-~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG-p~N~ta-  222 (297)
T COG1090         148 AQQLGTRVVLLRTGVVL-SPDGGA-LGKMLPLFK-LGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSG-PFNLTA-  222 (297)
T ss_pred             hhhcCceEEEEEEEEEe-cCCCcc-hhhhcchhh-hccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCC-cccccC-
Confidence            23459999999999654 544432 333332222 1111247899999999999999999999999977655 799999 


Q ss_pred             CCCCCCCCcccHHHHHHHHhc
Q 019935          312 EGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       312 ~~~~~~~~~~s~~e~~~~i~~  332 (333)
                            |.+++.+|+.+.+++
T Consensus       223 ------P~PV~~~~F~~al~r  237 (297)
T COG1090         223 ------PNPVRNKEFAHALGR  237 (297)
T ss_pred             ------CCcCcHHHHHHHHHH
Confidence                  699999999998875

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.8e-23  Score=180.98  Aligned_cols=228  Identities=15%  Similarity=0.086  Sum_probs=156.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~d~  154 (333)
                      ++++|||||+|+||++++++|+++|++|++++|++++.+.+.......+++++.+|+.|.+++. .+++       ++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLA-AALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHcCCCCE
Confidence            5689999999999999999999999999999999877665543333456889999999999887 4443       5899


Q ss_pred             EEEcCCCCCCCCCC---CCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||++|........   .+.....+.+|+.+..++++++     +.+.++||++||.......     ....|+.+|.. 
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~y~~sK~a~  155 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----GHPAYSAAKAGL  155 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----CCcccHHHHHHH
Confidence            99999975421110   1111223568999999998866     2356789999997654311     12345555431 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc---hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD---LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                          +.....+...|+++++++||.+ +++.....   ...+....         .......+|++++|+++++++++.+
T Consensus       156 ~~~~~~~a~~~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d~a~~~~~l~~~  225 (257)
T PRK07074        156 IHYTKLLAVEYGRFGIRANAVAPGTV-KTQAWEARVAANPQVFEEL---------KKWYPLQDFATPDDVANAVLFLASP  225 (257)
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEeCcC-CcchhhcccccChHHHHHH---------HhcCCCCCCCCHHHHHHHHHHHcCc
Confidence                2223334456899999999954 55542110   01111100         0123446899999999999999976


Q ss_pred             cc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          299 EF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..  ..|+.+++++|       ......||++.+..
T Consensus       226 ~~~~~~g~~~~~~~g-------~~~~~~~~~~~~~~  254 (257)
T PRK07074        226 AARAITGVCLPVDGG-------LTAGNREMARTLTL  254 (257)
T ss_pred             hhcCcCCcEEEeCCC-------cCcCChhhhhhhcc
Confidence            43  44889999886       66778898887754

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=9.9e-23  Score=172.55  Aligned_cols=236  Identities=17%  Similarity=0.197  Sum_probs=183.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----hhhc--cCCCCceEEEEccCCCcCCCchhhhc--CC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT----TLFG--KQDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~~--~~~~~~~~~v~~D~~d~~~~~~~~~~--~~  152 (333)
                      ++|++||||-||+-|++|++.|+++||+|+++.|..+...    .+..  .....+++++.+|++|...+. ++++  ..
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~-r~l~~v~P   79 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLL-RILEEVQP   79 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHH-HHHHhcCc
Confidence            3679999999999999999999999999999998743322    1111  112556889999999999998 7776  57


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC--CeEEEEecccccc-------CCCCCccchhhhHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL--KRIVLVSSVGVTK-------FNELPWSIMNLFGVL  222 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~--~~~v~~SS~~~~~-------~~~~~~~~~~~~~~~  222 (333)
                      |-|+|+|+.+++. .+|+.+....+++..|+.+|++|++. +.  -||...||+.-||       .++.|++|.++|++.
T Consensus        80 dEIYNLaAQS~V~-vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvA  158 (345)
T COG1089          80 DEIYNLAAQSHVG-VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA  158 (345)
T ss_pred             hhheecccccccc-ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHH
Confidence            9999999998765 46788888999999999999999975 43  4899999998888       467899999999988


Q ss_pred             HH--HHHHHHHHHhcCCCEEEEEccccc---CCCCCCcc------hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          223 KY--KKMGEDFVQKSGLPFTIIRAGRLT---DGPYTSYD------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       223 k~--k~~~e~~l~~~gi~~~~vrpg~~~---~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |.  .+..-.|-..+|+-..   -| +.   .+|..+..      .....+...+......+|+-+..+||.|..|.+++
T Consensus       159 KlYa~W~tvNYResYgl~Ac---nG-ILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         159 KLYAYWITVNYRESYGLFAC---NG-ILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHHHheeeehHhhcCceee---cc-eeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHH
Confidence            75  3555566666776432   23 33   33332211      22233444566777889999999999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      ++.+++++.  +..|.++.|       +..+++|+++..-
T Consensus       235 mwlmLQq~~--PddyViATg-------~t~sVrefv~~Af  265 (345)
T COG1089         235 MWLMLQQEE--PDDYVIATG-------ETHSVREFVELAF  265 (345)
T ss_pred             HHHHHccCC--CCceEEecC-------ceeeHHHHHHHHH
Confidence            999999865  578999997       7789999987643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=9.6e-24  Score=185.87  Aligned_cols=225  Identities=15%  Similarity=0.085  Sum_probs=149.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++||||||+|+||++++++|+++|++|++++|++++.+......  ...+++++.+|++|++++. ++++       +
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAIN-AGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            4579999999999999999999999999999999987665443221  1456888999999999887 5443       6


Q ss_pred             CcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.......   ..+.....+++|+.++.++++++    + .+.++||++||...+.    +....+.|+.+|
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----~~~~~~~y~~~k  157 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV----GSAGKAAYVSAK  157 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----CCCCcchhHHHH
Confidence            8999999997542211   11122235668889877766644    2 3678999999987764    334455566555


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-cccc--eeecCCCCcccccccHHHHHHHHHHh
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-GERR--AVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      ..     +.+...+...++++++++||.+ +++.............. ....  ...+......+.+++++|+|++++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~~~pg~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  236 (258)
T PRK12429        158 HGLIGLTKVVALEGATHGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFL  236 (258)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCC-cchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHH
Confidence            31     2222334456899999999955 66643211111100000 0000  00122233446799999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +....  ..|+.|++++|
T Consensus       237 ~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        237 ASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             cCccccCccCCeEEeCCC
Confidence            98643  34889999985

>PRK12320 hypothetical protein; Provisional

Probab=99.90  E-value=1.1e-22  Score=197.90  Aligned_cols=200  Identities=17%  Similarity=0.234  Sum_probs=147.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+||||||+||||++++++|+++|++|++++|.+....       ..+++++.+|++|+. +. +++.++|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-------~~~ve~v~~Dl~d~~-l~-~al~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-------DPRVDYVCASLRNPV-LQ-ELAGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-------cCCceEEEccCCCHH-HH-HHhcCCCEEEEcCccC
Confidence            37999999999999999999999999999998754311       457889999999984 66 7788999999999863


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                      .         .....+|+.++.|++++++. ++ ++|++||..  +...       .|.      ..|.++..+++++++
T Consensus        72 ~---------~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~~~-------~~~------~aE~ll~~~~~p~~I  126 (699)
T PRK12320         72 T---------SAPGGVGITGLAHVANAAARAGA-RLLFVSQAA--GRPE-------LYR------QAETLVSTGWAPSLV  126 (699)
T ss_pred             c---------cchhhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CCCc-------ccc------HHHHHHHhcCCCEEE
Confidence            2         11235899999999998855 66 799999874  3211       121      367777778899999


Q ss_pred             EEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcc
Q 019935          242 IRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQ  321 (333)
Q Consensus       242 vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~  321 (333)
                      +|++++ ||+........++.......     .. .....++|++|++++++.+++.+.  +.+||++++       +.+
T Consensus       127 LR~~nV-YGp~~~~~~~r~I~~~l~~~-----~~-~~pI~vIyVdDvv~alv~al~~~~--~GiyNIG~~-------~~~  190 (699)
T PRK12320        127 IRIAPP-VGRQLDWMVCRTVATLLRSK-----VS-ARPIRVLHLDDLVRFLVLALNTDR--NGVVDLATP-------DTT  190 (699)
T ss_pred             EeCcee-cCCCCcccHhHHHHHHHHHH-----Hc-CCceEEEEHHHHHHHHHHHHhCCC--CCEEEEeCC-------Cee
Confidence            999965 89865433222222221110     01 122235899999999999997643  349999995       789


Q ss_pred             cHHHHHHHHhc
Q 019935          322 KWRELFKAAKA  332 (333)
Q Consensus       322 s~~e~~~~i~~  332 (333)
                      |+.|+++.+..
T Consensus       191 Si~el~~~i~~  201 (699)
T PRK12320        191 NVVTAWRLLRS  201 (699)
T ss_pred             EHHHHHHHHHH
Confidence            99999888753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=1.8e-23  Score=184.10  Aligned_cols=219  Identities=15%  Similarity=0.096  Sum_probs=152.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|++++.+.......  +.++.++.+|++|+++++ ++++      
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVR-AAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHH-HHHHHHHHhc
Confidence            4567999999999999999999999999999999999876654433221  345788999999998887 5543      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       .+|+||||||......   ...+.....+.+|+.++.++++++.     .+.++||++||.....    +......|+.
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~y~~  161 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL----ARPGIAPYTA  161 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc----CCCCCccHHH
Confidence             5899999999754211   1112223456789999999999662     2567999999987654    3344556776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.....+..+|+++++|+||.+ .++......  ..+...         +........+.+++|+|+++++
T Consensus       162 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~  231 (255)
T PRK07523        162 TKGAVGNLTKGMATDWAKHGLQCNAIAPGYF-DTPLNAALVADPEFSAW---------LEKRTPAGRWGKVEELVGACVF  231 (255)
T ss_pred             HHHHHHHHHHHHHHHhhHhCeEEEEEEECcc-cCchhhhhccCHHHHHH---------HHhcCCCCCCcCHHHHHHHHHH
Confidence            6532     2233444567999999999955 555422100  111111         1112234568899999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++.++.  ..|+.+++++|.
T Consensus       232 l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        232 LASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             HcCchhcCccCcEEEECCCe
Confidence            998644  348999999873

>PRK06128 oxidoreductase; Provisional

Probab=99.90  E-value=5.5e-23  Score=185.31  Aligned_cols=221  Identities=13%  Similarity=0.114  Sum_probs=152.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccC--CCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +..+++|++|||||+|+||+++++.|+++|++|++..|+.+.  .+...+..  .+.++.++.+|++|+++++ +++   
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~  128 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCR-QLVERA  128 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHHH
Confidence            445678999999999999999999999999999988775432  22221111  1456788999999988877 443   


Q ss_pred             ----cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhh
Q 019935          150 ----EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                          .++|+||||||.....    +...+.....+++|+.+++++++++..   ..++||++||..++.    +......
T Consensus       129 ~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~  204 (300)
T PRK06128        129 VKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ----PSPTLLD  204 (300)
T ss_pred             HHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC----CCCCchh
Confidence                4789999999974311    112233455788999999999997632   235999999998876    3334445


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ +++.....  ......         .+........+.+++|+|.+
T Consensus       205 Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i-~t~~~~~~~~~~~~~~---------~~~~~~p~~r~~~p~dva~~  274 (300)
T PRK06128        205 YASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPV-WTPLQPSGGQPPEKIP---------DFGSETPMKRPGQPVEMAPL  274 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcC-cCCCcccCCCCHHHHH---------HHhcCCCCCCCcCHHHHHHH
Confidence            6655542     3333445567999999999955 66653210  111111         11222344568899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCC
Q 019935          292 CIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++.+..  ..|+.|++++|.
T Consensus       275 ~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        275 YVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             HHHHhCccccCccCcEEeeCCCE
Confidence            999998754  348999999873

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=5.2e-23  Score=178.76  Aligned_cols=214  Identities=25%  Similarity=0.303  Sum_probs=155.6

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|+||||.+|+++++.|++.+++|++++|+.++  .+.+.    ..+++++.+|+.|++++. ++|+++|+||++.+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~-~al~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLV-AALKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHH-HHHTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHH-HHHcCCceEEeecCcc
Confidence            7999999999999999999999999999999754  33333    457889999999999999 9999999999998753


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                      .             ........++++|+++ |+++||+.|....+.......+   .....+.|..+|+++++.+++|++
T Consensus        76 ~-------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p---~~~~~~~k~~ie~~l~~~~i~~t~  139 (233)
T PF05368_consen   76 H-------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEP---EIPHFDQKAEIEEYLRESGIPYTI  139 (233)
T ss_dssp             C-------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTT---HHHHHHHHHHHHHHHHHCTSEBEE
T ss_pred             h-------------hhhhhhhhhHHHhhhccccceEEEEEecccccccccccc---cchhhhhhhhhhhhhhhcccccee
Confidence            1             3456778999998855 9999997554444321111111   233445688899999999999999


Q ss_pred             EEcccccCCCCCCcchHHHHH--Hhhcc-cceeecCCCCcccccc-cHHHHHHHHHHhccCcccC--CcEEEecCCCCCC
Q 019935          242 IRAGRLTDGPYTSYDLNTLLK--ATAGE-RRAVLMGQGDKLIGEV-SRIVVAEACIQALDIEFTE--GEIYEINSVEGEG  315 (333)
Q Consensus       242 vrpg~~~~g~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~i-~v~Dva~a~~~~l~~~~~~--g~~~~v~~g~~~~  315 (333)
                      ||||.++...     +..+..  ..... ....+.++++....++ +.+|+|++++.++.++...  ++.+.+.+     
T Consensus       140 i~~g~f~e~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-----  209 (233)
T PF05368_consen  140 IRPGFFMENL-----LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-----  209 (233)
T ss_dssp             EEE-EEHHHH-----HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-----
T ss_pred             ccccchhhhh-----hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-----
Confidence            9999663210     111111  01111 1345666777666665 9999999999999998754  67888876     


Q ss_pred             CCCCcccHHHHHHHHhc
Q 019935          316 PGSDPQKWRELFKAAKA  332 (333)
Q Consensus       316 ~~~~~~s~~e~~~~i~~  332 (333)
                         +.+|++|+++.+++
T Consensus       210 ---~~~t~~eia~~~s~  223 (233)
T PF05368_consen  210 ---ETLTYNEIAAILSK  223 (233)
T ss_dssp             ---GEEEHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHH
Confidence               78999999999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.6e-23  Score=184.24  Aligned_cols=232  Identities=15%  Similarity=0.177  Sum_probs=156.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhc-----
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.++.+.......    ..++.++.+|++|++++. +.++     
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   83 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVA-RAVDAATAW   83 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            456899999999999999999999999999999998766544322111    246788999999998887 5544     


Q ss_pred             --CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-C----CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 --GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-P----SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        ++|+||||||.....    ....+.....+++|+.+..++++++ +    .+.++||++||...+.    +......|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y  159 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN----THRWFGAY  159 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC----CCCCCcch
Confidence              789999999964311    1112223346778999999998855 2    2346999999998765    22334556


Q ss_pred             HHHHHHHHHHHHH-------HhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          220 GVLKYKKMGEDFV-------QKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       220 ~~~k~k~~~e~~l-------~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      +.+|  ..++.++       ...++++++|+||.+ +++.......  .....         +........+++++|+|+
T Consensus       160 ~~sK--~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~  227 (276)
T PRK05875        160 GVTK--SAVDHLMKLAADELGPSWVRVNSIRPGLI-RTDLVAPITESPELSAD---------YRACTPLPRVGEVEDVAN  227 (276)
T ss_pred             HHHH--HHHHHHHHHHHHHhcccCeEEEEEecCcc-CCccccccccCHHHHHH---------HHcCCCCCCCcCHHHHHH
Confidence            6554  3344333       345899999999954 5544321110  00000         001223345788999999


Q ss_pred             HHHHhccCccc--CCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          291 ACIQALDIEFT--EGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       291 a~~~~l~~~~~--~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      +++++++++..  .|+++++++|...   ....+..|+++.+.
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~---~~~~~~~~~~~~~~  267 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHML---RRGPDFSSMLEPVF  267 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeec---cCCccHHHHHHHHh
Confidence            99999988653  4899999987432   22246777776654

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.90  E-value=1.1e-22  Score=172.21  Aligned_cols=233  Identities=22%  Similarity=0.204  Sum_probs=183.3

Q ss_pred             CCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        76 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +.++..+-++-|+|||||+|++++.+|++.|-.|++-.|-.+ ...++.-......+.+...|+.|+++++ ++++...+
T Consensus        55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr-~vvk~sNV  133 (391)
T KOG2865|consen   55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIR-AVVKHSNV  133 (391)
T ss_pred             CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHH-HHHHhCcE
Confidence            355667789999999999999999999999999999998543 3333333323456888999999999999 89999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      |||+.|.-     -....-.+.++|+.++..|++.|+. |+.|||++|+.++.      +.  +..-+.++|...|...+
T Consensus       134 VINLIGrd-----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan------v~--s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  134 VINLIGRD-----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN------VK--SPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             EEEeeccc-----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc------cc--ChHHHHHhhhhhHHHHH
Confidence            99999863     1234556889999999999999976 99999999998853      22  22335578888999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCC-CcccccccHHHHHHHHHHhccCcccCCcEEEecCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQG-DKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      +.--+.+|+||..+ ||..+.+ ++.+...-..-..+..++.| .....++++-|||.+|+.++.+|++.|++|.+.|  
T Consensus       201 dafPeAtIirPa~i-yG~eDrf-ln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vG--  276 (391)
T KOG2865|consen  201 DAFPEATIIRPADI-YGTEDRF-LNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVG--  276 (391)
T ss_pred             hhCCcceeechhhh-cccchhH-HHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecC--
Confidence            88778999999954 7877654 34333333224455555555 3456799999999999999999999999999999  


Q ss_pred             CCCCCCCcccHHHHHHHHh
Q 019935          313 GEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       313 ~~~~~~~~~s~~e~~~~i~  331 (333)
                           |+...+.|+++.+-
T Consensus       277 -----P~~yql~eLvd~my  290 (391)
T KOG2865|consen  277 -----PDRYQLSELVDIMY  290 (391)
T ss_pred             -----CchhhHHHHHHHHH
Confidence                 69999999988763

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-22  Score=177.62  Aligned_cols=220  Identities=16%  Similarity=0.191  Sum_probs=146.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ++++++++||||+||||++++++|+++|++|++++|+.++ .+.+....  .+.++.++.+|++|++++. .++      
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   81 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVA-ALMDTAREE   81 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHh
Confidence            3456899999999999999999999999999999997542 22221111  1346788999999998887 444      


Q ss_pred             -cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEecccccc-CCCCCccchhhhHHHHH
Q 019935          150 -EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK-FNELPWSIMNLFGVLKY  224 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~-~~~~~~~~~~~~~~~k~  224 (333)
                       .++|+||||||....   ........+++|+.++.++++++..   ..++||++||..... ....+......|+.+  
T Consensus        82 ~~~~d~vi~~ag~~~~---~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~s--  156 (248)
T PRK07806         82 FGGLDALVLNASGGME---SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARS--  156 (248)
T ss_pred             CCCCcEEEECCCCCCC---CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHH--
Confidence             368999999986431   1223456789999999999997742   235899999965532 111122223455544  


Q ss_pred             HHHHHHHH-------HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          225 KKMGEDFV-------QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       225 k~~~e~~l-------~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..+|.++       ...|+++++++|+.+ .++...    .+....... .  .........++++++|+|++++.+++
T Consensus       157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~-~~~~~~----~~~~~~~~~-~--~~~~~~~~~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        157 KRAGEDALRALRPELAEKGIGFVVVSGDMI-EGTVTA----TLLNRLNPG-A--IEARREAAGKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             HHHHHHHHHHHHHHhhccCeEEEEeCCccc-cCchhh----hhhccCCHH-H--HHHHHhhhcccCCHHHHHHHHHHHhh
Confidence            44455443       346899999999844 444211    111000000 0  00000122478999999999999999


Q ss_pred             CcccCCcEEEecCCC
Q 019935          298 IEFTEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~~~g~~~~v~~g~  312 (333)
                      .+...|++|++++++
T Consensus       229 ~~~~~g~~~~i~~~~  243 (248)
T PRK07806        229 APVPSGHIEYVGGAD  243 (248)
T ss_pred             ccccCccEEEecCcc
Confidence            776779999999963

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.3e-23  Score=181.94  Aligned_cols=222  Identities=16%  Similarity=0.088  Sum_probs=151.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~------~  150 (333)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.++.+......   ...++.++.+|++|+++++ +++      .
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~-~~~~~~~~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLE-RTVKELKNIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHH-HHHHHHHhhC
Confidence            56789999999999999999999999999999999987665443221   1346888999999998887 544      3


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|++|||||.....   +...++....+++|+.+.+.+++++    + ++.++||++||.....    +......|+.+
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~----~~~~~~~y~as  160 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE----PIPNIALSNVV  160 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC----CCCcchhhHHH
Confidence            689999999975321   1122334456788999888888754    2 3557999999998754    33334455555


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHH-hh-c----ccceeecCCCCcccccccHHHHHHH
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA-TA-G----ERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~-~~-~----~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |.     .+.+...+..+||++++|.||.+ ..+..    ..+... .. .    ......+....+...+..++|+|++
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v-~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  235 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGII-RTDRV----IQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYL  235 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcC-ccHHH----HHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHH
Confidence            53     35555667778999999999955 44421    111000 00 0    0000001112234567899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.++.  ..|+++.+++|
T Consensus       236 v~fL~s~~~~~itG~~~~vdgG  257 (263)
T PRK08339        236 VAFLASDLGSYINGAMIPVDGG  257 (263)
T ss_pred             HHHHhcchhcCccCceEEECCC
Confidence            999998744  45889999886

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=4.4e-23  Score=181.95  Aligned_cols=226  Identities=12%  Similarity=0.073  Sum_probs=150.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++||||||+|+||++++++|+++|++|++++|+....+......    ...+++++.+|++|++++. .++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~-~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVL-ALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHH-HHHHHHHHHcC
Confidence            578999999999999999999999999999999876554433211    1246889999999988776 443       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ..++.....+++|+.++.++++++     +.+ -++||++||.....    +......|+.
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~  156 (259)
T PRK12384         81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV----GSKHNSGYSA  156 (259)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc----CCCCCchhHH
Confidence            6899999998754211   112223345688999988888755     224 35999999976432    1223345776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-c-ccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-G-ERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|+.     +.+...+...|+++++++||.++..+......+.+..... . ......+.+......+++++|++++++.
T Consensus       157 sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~  236 (259)
T PRK12384        157 AKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLF  236 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHH
Confidence            6642     2333444568999999999966433322211222111110 0 0111112334556789999999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++.+..  ..|++|++++|+
T Consensus       237 l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        237 YASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HcCcccccccCceEEEcCCE
Confidence            988654  358999999974

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.89  E-value=4.9e-23  Score=181.01  Aligned_cols=225  Identities=14%  Similarity=0.094  Sum_probs=147.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCch------hhhcCCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDP------AIFEGVT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~------~~~~~~d  153 (333)
                      ++++|||||+|+||++++++|+++|++|++++|+.+..+.+....  ...+++++.+|+.|++++..      +.+.++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            368999999999999999999999999999999877655543321  13468889999999986651      2345789


Q ss_pred             EEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +|||+++.......   ..+.....+..|+.++..+++++    + .++++||++||.+.+.    +......|+.+|..
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~----~~~~~~~y~~sk~a  156 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV----ASPFKSAYVAAKHG  156 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC----CCCCCchhHHHHHH
Confidence            99999997542111   11112334667999988888865    3 3678999999987654    22233456655431


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cce--eecCCCCcccccccHHHHHHHHHHhcc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRA--VLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                           +.+...+...+++++++|||.+ +++................ ...  ..+..+...+++++++|+|++++.++.
T Consensus       157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  235 (255)
T TIGR01963       157 LIGLTKVLALEVAAHGITVNAICPGYV-RTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLAS  235 (255)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcc-ccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcC
Confidence                 1122223346899999999955 6654211111000000000 000  012234456789999999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ++.  ..|+.|++++|
T Consensus       236 ~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       236 DAAAGITGQAIVLDGG  251 (255)
T ss_pred             ccccCccceEEEEcCc
Confidence            742  35789999986

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.89  E-value=1.1e-22  Score=163.07  Aligned_cols=215  Identities=18%  Similarity=0.177  Sum_probs=161.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhh-------hc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      ..+.+.++||||+++||++++..|+++|++|.+.+++...+++....+.+ .+...+.+|++++.+++ ..       +.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~-~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQ-NTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHH-HHHHHHHHhcC
Confidence            34567899999999999999999999999999999988877776655544 35567899999998877 43       34


Q ss_pred             CCcEEEEcCCCCCCC------CCCCCCCCCCcchhHHHHHHHHHhc-CC------CCCeEEEEeccccccCCCCCccchh
Q 019935          151 GVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSAL-PS------SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~-~~------~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                      .+++||||||+....      ..+|+.   ...+|+.|++.+.+++ +.      ..-+||++||+-..-    .-....
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~---vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki----GN~GQt  162 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDS---VIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI----GNFGQT  162 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHH---HHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc----ccccch
Confidence            789999999997521      133444   7889999999999965 32      223999999986643    223345


Q ss_pred             hhHHHH-----HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLK-----YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k-----~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|     +.+.+.+++...+|++++|.|| |+-.|.+...-+...+.+.+.-         +...+...||+|..+
T Consensus       163 nYAAsK~GvIgftktaArEla~knIrvN~VlPG-FI~tpMT~~mp~~v~~ki~~~i---------Pmgr~G~~EevA~~V  232 (256)
T KOG1200|consen  163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPG-FIATPMTEAMPPKVLDKILGMI---------PMGRLGEAEEVANLV  232 (256)
T ss_pred             hhhhhcCceeeeeHHHHHHHhhcCceEeEeccc-cccChhhhhcCHHHHHHHHccC---------CccccCCHHHHHHHH
Confidence            566555     3577888999999999999999 6678877655555555444332         333556678999999


Q ss_pred             HHhccCcccC--CcEEEecCC
Q 019935          293 IQALDIEFTE--GEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~~~--g~~~~v~~g  311 (333)
                      +++.++...+  |..+.+.+|
T Consensus       233 ~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  233 LFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             HHHhccccccccceeEEEecc
Confidence            9999876543  889999886

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.1e-22  Score=176.00  Aligned_cols=219  Identities=18%  Similarity=0.177  Sum_probs=149.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhcc--CCCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGK--QDEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~--~~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+++++||||||+|+||++++++|+++|++|+++.|+..+.. .+...  ....+++++.+|+.|++++. +++      
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~   81 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALE-AAVAAAVER   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHH-HHHHHHHHH
Confidence            345679999999999999999999999999988777654322 21111  01456889999999999887 554      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+|||+||......   ...+.....+++|+.+..++++++     +.+.++||++||...+.    +......|+
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~----~~~~~~~y~  157 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP----GWPGRSNYA  157 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC----CCCCchHHH
Confidence             36899999999653211   111222445778999999999865     33678999999998865    333445566


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +..+..+.+.|++++++|||.+ +++............   .      ........+++++|+++++.++
T Consensus       158 ~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~-~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~dva~~~~~~  227 (249)
T PRK12825        158 AAKAGLVGLTKALARELAEYGITVNMVAPGDI-DTDMKEATIEEAREA---K------DAETPLGRSGTPEDIARAVAFL  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCc-cCCccccccchhHHh---h------hccCCCCCCcCHHHHHHHHHHH
Confidence            55532     2233444557999999999955 666533211111100   0      0012334589999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      +.++.  ..|++|++++|.
T Consensus       228 ~~~~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        228 CSDASDYITGQVIEVTGGV  246 (249)
T ss_pred             hCccccCcCCCEEEeCCCE
Confidence            97753  458999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.6e-22  Score=175.97  Aligned_cols=221  Identities=14%  Similarity=0.045  Sum_probs=150.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-------C
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++++|||||+|+||++++++|+++|++|++++|++++.+.+..... ..++.++.+|++|++++. .+++       +
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   81 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVE-AAVAAALERFGS   81 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHhCC
Confidence            456899999999999999999999999999999999876655432211 345789999999999887 5543       6


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|+|||++|......    ...+.....+++|+.++.++++++.     .+.++||++||..++.    +......|+.+
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~y~~s  157 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR----PRPGLGWYNAS  157 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----CCCCchHHHHH
Confidence            799999999743211    1122234467889999888887552     3668999999998876    44455567766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.....+...++++++++||.+ .++.........    . ......+........+++++|+|+++++++.
T Consensus       158 k~~~~~~~~~~a~~~~~~~i~v~~i~pg~~-~t~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (251)
T PRK07231        158 KGAVITLTKALAAELGPDKIRVNAVAPVVV-ETGLLEAFMGEP----T-PENRAKFLATIPLGRLGTPEDIANAALFLAS  231 (251)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEECcc-CCCcchhhhccc----C-hHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            542     2222333455999999999955 554322111100    0 0000001112234568899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      .+.  ..|+.+.+++|
T Consensus       232 ~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        232 DEASWITGVTLVVDGG  247 (251)
T ss_pred             ccccCCCCCeEEECCC
Confidence            654  34788888875

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-22  Score=177.99  Aligned_cols=222  Identities=13%  Similarity=0.029  Sum_probs=149.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++++++||||+|+||++++++|+++|++|++++|+.++.+++.... ..++.++.+|++|+++++ +++       ..
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~g~   80 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDITDDAAIE-RAVATVVARFGR   80 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCCCHHHHH-HHHHHHHHHhCC
Confidence            456789999999999999999999999999999999987666554333 456889999999998887 443       46


Q ss_pred             CcEEEEcCCCCCCC--CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          152 VTHVICCTGTTAFP--SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      +|+||||||.....  ...++.....+++|+.+.+++++++.    +..++||++||.....    +......|+.+|. 
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~asKaa  156 (261)
T PRK08265         81 VDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF----AQTGRWLYPASKAA  156 (261)
T ss_pred             CCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc----CCCCCchhHHHHHH
Confidence            89999999975321  11122334467889999999998652    3346899999987654    2233345665553 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          225 ----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       225 ----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                          .+.+...+...|+++++|+||.+ .++........-....   ...  .........+..++|+|++++++++++.
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~-~t~~~~~~~~~~~~~~---~~~--~~~~~p~~r~~~p~dva~~~~~l~s~~~  230 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWT-WSRVMDELSGGDRAKA---DRV--AAPFHLLGRVGDPEEVAQVVAFLCSDAA  230 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCc-cChhhhhhcccchhHH---HHh--hcccCCCCCccCHHHHHHHHHHHcCccc
Confidence                22333444557999999999954 4442110000000000   000  0011223457889999999999998643


Q ss_pred             --cCCcEEEecCCC
Q 019935          301 --TEGEIYEINSVE  312 (333)
Q Consensus       301 --~~g~~~~v~~g~  312 (333)
                        ..|+.+.+++|-
T Consensus       231 ~~~tG~~i~vdgg~  244 (261)
T PRK08265        231 SFVTGADYAVDGGY  244 (261)
T ss_pred             cCccCcEEEECCCe
Confidence              458899998874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=1.5e-22  Score=177.45  Aligned_cols=220  Identities=15%  Similarity=0.115  Sum_probs=151.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++++||||||+|+||++++++|+++|++|++++|+.++........  ...++.++.+|+.|+++++ ++++      
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALK-AAVAAGVEDF   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHh
Confidence            346789999999999999999999999999999999976544332211  1345888999999998887 5553      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       .+|+|||++|......   ...+.....+++|+.+..++++++     +.+.++||++||...+..   +......|+.
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---~~~~~~~y~~  158 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV---GYPGLAHYAA  158 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc---CCCCccHHHH
Confidence             6899999998764211   111223446778999999999865     235789999999987621   3334456765


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHH-HHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL-LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|..     +.+...+...|+++++++||.+ +++......... .....         .......+++++|+|++++.+
T Consensus       159 sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l  228 (251)
T PRK12826        159 SKAGLVGFTRALALELAARNITVNSVHPGGV-DTPMAGNLGDAQWAEAIA---------AAIPLGRLGEPEDIAAAVLFL  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCCC-CcchhhhcCchHHHHHHH---------hcCCCCCCcCHHHHHHHHHHH
Confidence            5532     2223334556999999999965 666432111111 11111         112223689999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      +..+.  ..|+.|++++|.
T Consensus       229 ~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        229 ASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             hCccccCcCCcEEEECCCc
Confidence            87654  358999998863

>PRK06182 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.4e-22  Score=180.25  Aligned_cols=219  Identities=17%  Similarity=0.178  Sum_probs=143.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~d  153 (333)
                      .+++++||||+|+||++++++|+++|++|++++|+.++.+.+.    ..+++++.+|++|+++++ ++++       ++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SLGVHPLSLDVTDEASIK-AAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hCCCeEEEeeCCCHHHHH-HHHHHHHHhcCCCC
Confidence            3579999999999999999999999999999999987776554    345889999999999887 5554       789


Q ss_pred             EEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||.....   +..++..+..+++|+.+..++++++    + .+.++||++||.+...    +.+....|+.+|..
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sKaa  152 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----YTPLGAWYHATKFA  152 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----CCCCccHhHHHHHH
Confidence            999999975421   1122233456788999976666643    3 3668999999987643    22223346655432


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccc-------ceeecCCCCcccccccHHHHHHHHH
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER-------RAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                           +.+..++...|+++++|+||.+ .++........+........       ....+........+.+++|+|++++
T Consensus       153 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~  231 (273)
T PRK06182        153 LEGFSDALRLEVAPFGIDVVVIEPGGI-KTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAIS  231 (273)
T ss_pred             HHHHHHHHHHHhcccCCEEEEEecCCc-ccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence                 2223344567999999999955 55542111110000000000       0001111123346789999999999


Q ss_pred             HhccCcccCCcEEEecC
Q 019935          294 QALDIEFTEGEIYEINS  310 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~  310 (333)
                      +++..... ...|+++.
T Consensus       232 ~~~~~~~~-~~~~~~g~  247 (273)
T PRK06182        232 KAVTARRP-KTRYAVGF  247 (273)
T ss_pred             HHHhCCCC-CceeecCc
Confidence            99986422 34566654

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-22  Score=181.29  Aligned_cols=220  Identities=11%  Similarity=0.093  Sum_probs=149.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+... .+......  .+.++.++.+|++|.++++ +++    
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~i~  119 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCK-DAVEETV  119 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-HHHHHHH
Confidence            456678899999999999999999999999999999987532 22221111  1346788999999988887 444    


Q ss_pred             ---cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 ---EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         .++|+||||||......    ..++.....+++|+.+..++++++..   ..++||++||..++..    ......|
T Consensus       120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~----~~~~~~Y  195 (290)
T PRK06701        120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG----NETLIDY  195 (290)
T ss_pred             HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC----CCCcchh
Confidence               36899999999753211    11122344678999999999997632   2368999999988753    2223456


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++...... .....         .+........+.+++|+|++++
T Consensus       196 ~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v-~T~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~  265 (290)
T PRK06701        196 SATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPI-WTPLIPSDFDEEKVS---------QFGSNTPMQRPGQPEELAPAYV  265 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCC-CCcccccccCHHHHH---------HHHhcCCcCCCcCHHHHHHHHH
Confidence            655432     2222333456999999999954 555322111 11110         1112234457899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.+..  ..|+++++++|
T Consensus       266 ~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        266 FLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             HHcCcccCCccCcEEEeCCC
Confidence            9998754  45889999886

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-22  Score=179.15  Aligned_cols=224  Identities=14%  Similarity=0.047  Sum_probs=150.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      .+.+|+++||||+|+||++++++|+++|++|++++|+.++.+......    ...++.++.+|++|+++++ +++     
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~   82 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVA-AAVAAAEE   82 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHH-HHHHHHHH
Confidence            356789999999999999999999999999999999887665543322    1346788999999998887 444     


Q ss_pred             --cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||...+.    +......|
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  158 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK----IIPGCFPY  158 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc----CCCCchHH
Confidence              37999999999753211   111223346788999999999865     23457999999987765    33334456


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+...+...|++++.|+||.+ .++.....+......   ...........+...+..++|+|+++++
T Consensus       159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v-~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~~~~~va~~~~f  234 (260)
T PRK07063        159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYI-ETQLTEDWWNAQPDP---AAARAETLALQPMKRIGRPEEVAMTAVF  234 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCc-cChhhhhhhhccCCh---HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            65553     23333444567999999999955 444321100000000   0000000011123457889999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.+..  ..|+.+.+++|
T Consensus       235 l~s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        235 LASDEAPFINATCITIDGG  253 (260)
T ss_pred             HcCccccccCCcEEEECCC
Confidence            998754  45889999886

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=1.8e-22  Score=165.32  Aligned_cols=225  Identities=22%  Similarity=0.220  Sum_probs=172.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      +++|||||++|.+|++|.+.+...|.  +-+++.-+.                  .+|+++.++.+ ++|+  ...+|||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk------------------d~DLt~~a~t~-~lF~~ekPthVIh   61 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK------------------DADLTNLADTR-ALFESEKPTHVIH   61 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc------------------cccccchHHHH-HHHhccCCceeee
Confidence            36899999999999999999999876  444443322                  46999988888 7886  5799999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEeccccccCCC-CCc---------cchhhhHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE-LPW---------SIMNLFGVLKYKK  226 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~~~~~~-~~~---------~~~~~~~~~k~k~  226 (333)
                      +|+..+.-......+.++++.|+...-|++..+ ..|++++|++.|.+.|.+.. .|.         ...+.++|+-+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            998776433444556778999999999999966 56999999999999987532 111         1234556666665


Q ss_pred             HHH----HHHHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhh-----cccceeecCCCCcccccccHHHHHHH
Q 019935          227 MGE----DFVQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATA-----GERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       227 ~~e----~~l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ++.    .|..++|..++.+-|+++ |||..+++      ++.++....     +.....++|.|.+++.|+|.+|+|++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNv-fGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l  220 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNV-FGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL  220 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccc-cCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence            443    566678999999999976 89988765      444443322     33477899999999999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++.+-+. -+.++++.|+.     +.++++|+++++.+
T Consensus       221 ~i~vlr~Y~~-vEpiils~ge~-----~EVtI~e~aeaV~e  255 (315)
T KOG1431|consen  221 FIWVLREYEG-VEPIILSVGES-----DEVTIREAAEAVVE  255 (315)
T ss_pred             HHHHHHhhcC-ccceEeccCcc-----ceeEHHHHHHHHHH
Confidence            9999988543 45788888764     78999999998865

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.89  E-value=2.2e-22  Score=176.82  Aligned_cols=217  Identities=12%  Similarity=0.010  Sum_probs=147.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccCCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.... ...... .+.++.++.+|++|+++++ +++       .
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~g   82 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDID-SIVSQAVEVMG   82 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHH-HHHHHHHHHcC
Confidence            45678999999999999999999999999999998864321 111111 1456888999999999887 444       4


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|++|||||.....   ....+.....+++|+.+.+.+++++     +.+ .++||++||...+..    ......|+.
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~----~~~~~~Y~a  158 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG----GIRVPSYTA  158 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC----CCCCcchHH
Confidence            689999999975421   1122334557889999999998865     222 369999999987652    222345665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|.     .+.+...+..+|+++++|+||.+ ..+......  ........         ...+...+..++|+|+++++
T Consensus       159 sK~a~~~l~~~la~e~~~~girvn~v~PG~v-~t~~~~~~~~~~~~~~~~~---------~~~p~~~~~~peeva~~~~~  228 (251)
T PRK12481        159 SKSAVMGLTRALATELSQYNINVNAIAPGYM-ATDNTAALRADTARNEAIL---------ERIPASRWGTPDDLAGPAIF  228 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCC-ccCchhhcccChHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence            553     23444556678999999999955 444322100  00000000         01123357899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+++.+++|
T Consensus       229 L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        229 LSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HhCccccCcCCceEEECCC
Confidence            998644  55888988875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-22  Score=178.58  Aligned_cols=211  Identities=14%  Similarity=0.095  Sum_probs=141.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~d  153 (333)
                      ++++||||||+|+||++++++|+++|++|++++|++++.+.+.... ..++.++.+|++|++++. ++++       ++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~d~~~~~-~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-PDRALARLLDVTDFDAID-AVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc-CCCeeEEEccCCCHHHHH-HHHHHHHHHhCCCC
Confidence            3578999999999999999999999999999999987766554322 346888999999998887 4443       689


Q ss_pred             EEEEcCCCCCCCCCC---CCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||........   .+.....+++|+.|+.++++++     +.+.++||++||.++..    +......|+.+|..
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~----~~~~~~~Y~~sK~a  156 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI----TMPGIGYYCGSKFA  156 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC----CCCCcchhHHHHHH
Confidence            999999986422111   1112335789999999999974     23567999999988765    33445667766542


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                           +.+...++..|+++++++||.+ +++....       ....+.............   .....+.+++|+|++++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~  232 (277)
T PRK06180        157 LEGISESLAKEVAPFGIHVTAVEPGSF-RTDWAGRSMVRTPRSIADYDALFGPIRQAREA---KSGKQPGDPAKAAQAIL  232 (277)
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEecCCc-ccCccccccccCCCCcHhHHHHHHHHHHHHHh---hccCCCCCHHHHHHHHH
Confidence                 2222334456999999999966 4432111       111111110000000000   11234678999999999


Q ss_pred             HhccCccc
Q 019935          294 QALDIEFT  301 (333)
Q Consensus       294 ~~l~~~~~  301 (333)
                      .+++.+..
T Consensus       233 ~~l~~~~~  240 (277)
T PRK06180        233 AAVESDEP  240 (277)
T ss_pred             HHHcCCCC
Confidence            99987643

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.5e-22  Score=178.37  Aligned_cols=226  Identities=13%  Similarity=0.068  Sum_probs=149.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++|+||||||+|+||++++++|+++|++|++++|+++..+.+.....  ..++.++.+|++|+++++ .++       .
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCA-NLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHH-HHHHHHHHHcC
Confidence            356899999999999999999999999999999998876555433221  346789999999998876 443       4


Q ss_pred             CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||.....    ....+.....+++|+.+...+++++.    ...++||++||...+.    +......|+.+
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~~s  157 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH----SQPKYGAYKMA  157 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc----CCCCcchhHHH
Confidence            789999999874311    11223334567889999999999762    2235999999988754    33444566655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh-hcccc-eeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT-AGERR-AVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.....+...|+++++++||. ++++............. ..... ...+........+.+++|+|++++.+
T Consensus       158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l  236 (258)
T PRK07890        158 KGALLAASQSLATELGPQGIRVNSVAPGY-IWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFL  236 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeCCc-cCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence            532     222333445689999999994 46664221111000000 00000 00001112334578999999999999


Q ss_pred             ccCc--ccCCcEEEecCC
Q 019935          296 LDIE--FTEGEIYEINSV  311 (333)
Q Consensus       296 l~~~--~~~g~~~~v~~g  311 (333)
                      ++..  ...|+.+.+++|
T Consensus       237 ~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        237 ASDLARAITGQTLDVNCG  254 (258)
T ss_pred             cCHhhhCccCcEEEeCCc
Confidence            9853  245788888876

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3e-22  Score=174.20  Aligned_cols=210  Identities=18%  Similarity=0.163  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .++++++|||||+|+||++++++|+++|++|++++|++.+...........+++++.+|+.|.++++ +++       .+
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   82 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAAR-RAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHH-HHHHHHHHHhCC
Confidence            3567899999999999999999999999999999998766443322222446778899999988877 444       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+|||++|......   ...+.....+++|+.++.++++++     +.+.++||++||...+.    +......|+.+|
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~y~~sk  158 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK----AGPGMGAYAAAK  158 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc----CCCCcchhHHHH
Confidence            899999998753211   111112334678999999988865     23678999999998876    333444566554


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      ..     +...+.+.+.++++++++||.+ +++.....                .. ......|++++|+|+++++++.+
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v-~~~~~~~~----------------~~-~~~~~~~~~~~dva~~~~~~l~~  220 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSII-DTPPNRAD----------------MP-DADFSRWVTPEQIAAVIAFLLSD  220 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcc-cCcchhhc----------------CC-chhhhcCCCHHHHHHHHHHHhCc
Confidence            32     2222334456999999999965 55421100                00 11233489999999999999987


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+.+.+++|
T Consensus       221 ~~~~~~g~~~~~~g~  235 (239)
T PRK12828        221 EAQAITGASIPVDGG  235 (239)
T ss_pred             ccccccceEEEecCC
Confidence            53  34889999886

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.5e-22  Score=176.14  Aligned_cols=217  Identities=14%  Similarity=0.117  Sum_probs=143.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      .+++++||||+|+||++++++|+++|++|++ ..|+.++.++..+..  ...++.++.+|++|++++. ++++       
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIK-EMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            4579999999999999999999999999877 477766554432211  1456888999999999877 5543       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.++.++++++.     .+.++||++||...+.    +..+...|+.+
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~y~~s  157 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR----YLENYTTVGVS  157 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc----CCCCccHHHHH
Confidence            6899999998753211   0111112246789999999998662     3567999999987754    33344556655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.....+.+.|+++++|+||.+ .++.....  ...+.....         .......+++++|+|++++++
T Consensus       158 K~a~~~~~~~~~~~~~~~~i~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~~  227 (250)
T PRK08063        158 KAALEALTRYLAVELAPKGIAVNAVSGGAV-DTDALKHFPNREELLEDAR---------AKTPAGRMVEPEDVANAVLFL  227 (250)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEeEecCcc-cCchhhhccCchHHHHHHh---------cCCCCCCCcCHHHHHHHHHHH
Confidence            432     1222333457999999999955 44432110  011111111         011223579999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.  ..|+.+++++|.
T Consensus       228 ~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        228 CSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             cCchhcCccCCEEEECCCe
Confidence            98754  348899999863

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.9e-22  Score=176.26  Aligned_cols=218  Identities=13%  Similarity=0.045  Sum_probs=149.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++++++||||||+|+||+++++.|+++|++|++++|+.+...... ......+.++.+|++|+++++ +++       .
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~   88 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVE-AAVAAVISAFG   88 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHH-HHHHHHHHHhC
Confidence            3467789999999999999999999999999999999875432221 112445778999999998877 444       3


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||+|......   ...+.....+++|+.+..++++++.     .+.++||++||.....    +......|+.+
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  164 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV----ALERHVAYCAS  164 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc----CCCCCchHHHH
Confidence            6899999999754211   1112223467889999999998762     2567999999987643    23334456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHH-HHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNT-LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |..     +.+...+...|++++.|+||.+ .++.....+.. ....         +........+.+++|+|+++++++
T Consensus       165 K~a~~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~va~~~~~l~  234 (255)
T PRK06841        165 KAGVVGMTKVLALEWGPYGITVNAISPTVV-LTELGKKAWAGEKGER---------AKKLIPAGRFAYPEEIAAAALFLA  234 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCcC-cCcccccccchhHHHH---------HHhcCCCCCCcCHHHHHHHHHHHc
Confidence            542     3333444557999999999955 55432211110 0000         111123446889999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      ..+.  ..|+.+.+++|
T Consensus       235 ~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        235 SDAAAMITGENLVIDGG  251 (255)
T ss_pred             CccccCccCCEEEECCC
Confidence            8754  45899999886

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.6e-22  Score=175.65  Aligned_cols=219  Identities=13%  Similarity=0.091  Sum_probs=149.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++++++||||+|+||++++++|+++|++|++++|++++.+.+.....  +.++.++.+|++|+++++ +++       
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   81 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAK-ALVALAVERF   81 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHhc
Confidence            4567899999999999999999999999999999999877655433221  346788999999998877 444       


Q ss_pred             cCCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|+||||||....  +  ....+.....+++|+.+..++++++    + .+.++||++||...+..   +......|+
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~---~~~~~~~Y~  158 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA---GFPGMAAYA  158 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc---CCCCcchhH
Confidence            378999999997531  1  1112233456889999988887744    2 35578999999876531   223345676


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+...|+++++|+||.+ ..+.....  ........         ........+.+++|+|++++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~va~~~~  228 (254)
T PRK07478        159 ASKAGLIGLTQVLAAEYGAQGIRVNALLPGGT-DTPMGRAMGDTPEALAFV---------AGLHALKRMAQPEEIAQAAL  228 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcc-cCcccccccCCHHHHHHH---------HhcCCCCCCcCHHHHHHHHH
Confidence            66542     2333444556899999999955 55432110  01110000         01112345778999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.++.  ..|+++.+.+|
T Consensus       229 ~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        229 FLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             HHcCchhcCCCCCeEEeCCc
Confidence            9998754  45889999876

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-22  Score=176.53  Aligned_cols=218  Identities=13%  Similarity=0.106  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++++++||||+|+||++++++|+++|++|+++ .|+.++.+.......  ..+++++.+|++|++++. ++++     
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~-~~~~~~~~~   81 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVK-KLVEQLKNE   81 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHH-HHHHHHHHH
Confidence            3456899999999999999999999999999875 677655443322111  346888999999999887 4443     


Q ss_pred             --------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          151 --------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 --------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                              ++|+||||||......   ..++.....+++|+.++.++++++..   ..++||++||..++.    +....
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~----~~~~~  157 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL----GFTGS  157 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC----CCCCC
Confidence                    5899999999753211   11111233566899999999997632   346899999998865    33444


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.....+...|+++++++||.+ +++......  ..+....         ........+++++|+|
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva  227 (254)
T PRK12746        158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT-KTDINAKLLDDPEIRNFA---------TNSSVFGRIGQVEDIA  227 (254)
T ss_pred             cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc-cCcchhhhccChhHHHHH---------HhcCCcCCCCCHHHHH
Confidence            557655532     1222333456899999999954 555422100  0010000         1112234678999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++..++.++.  ..|++|++++|
T Consensus       228 ~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        228 DAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHcCcccCCcCCCEEEeCCC
Confidence            99999988753  35889999875

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.88  E-value=8.3e-22  Score=172.97  Aligned_cols=223  Identities=13%  Similarity=0.075  Sum_probs=147.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++++++||||+|+||++++++|+++|++|+++.|+.+..+...... ...++.++.+|++|+++++ +++       .
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVE-ALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            356789999999999999999999999999999999876654433221 1345788999999999887 544       3


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||+|......   ...+.....+.+|+.++.++++++    + .+.++||++||.....    +......|+.+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~~s  156 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA----GGRGRAAYVAS  156 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc----CCCCccHHHHH
Confidence            7899999999754211   111222334778999998877754    2 3668999999987653    22334556666


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |..     +.+...+...|+++++++||.+ +++.......    ........ ...........|++++|+|+++++++
T Consensus       157 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~-~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~  231 (252)
T PRK06138        157 KGAIASLTRAMALDHATDGIRVNAVAPGTI-DTPYFRRIFA----RHADPEALREALRARHPMNRFGTAEEVAQAALFLA  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEECCc-cCcchhhhhc----cccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            542     2222233455999999999955 6654221100    00000000 00111122335889999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .++.  ..|+.+.+.+|
T Consensus       232 ~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        232 SDESSFATGTTLVVDGG  248 (252)
T ss_pred             CchhcCccCCEEEECCC
Confidence            8865  34788888875

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.7e-22  Score=176.43  Aligned_cols=228  Identities=13%  Similarity=0.124  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.......++.++.+|++|++++. .++       .+
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   86 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVE-RVFDTAVERFGG   86 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHH-HHHHHHHHHhCC
Confidence            4567899999999999999999999999999999998776655433222235688999999999877 444       47


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----CC-CC-CeEEEEeccccccCCCCCccchhhhHH
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PS-SL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~-~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      +|+|||++|......    ...+.....+++|+.++.++++++    +. +. ++|+++||.+...    +......|+.
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~----~~~~~~~y~~  162 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL----GYPGRTPYAA  162 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc----CCCCCchhHH
Confidence            899999999762111    111222446788999999988865    22 34 6788888876543    2233345665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce--eecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA--VLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.....+...+++++++|||.+ +++...................  ...........+++++|+|++++.
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIV-RGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCc-CChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            5432     1222223446899999999955 6765322111100000000000  000011223468999999999999


Q ss_pred             hccCc--ccCCcEEEecCCC
Q 019935          295 ALDIE--FTEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~--~~~g~~~~v~~g~  312 (333)
                      ++...  ...|+.|++++|.
T Consensus       242 l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        242 LASPAARYITGQAISVDGNV  261 (264)
T ss_pred             HcCccccCccCcEEEeCCCc
Confidence            98753  2458899999974

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.7e-22  Score=172.83  Aligned_cols=220  Identities=12%  Similarity=0.050  Sum_probs=149.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.....  ..++..+.+|++|+++++ +++      
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   83 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVT-SMLDQVTAE   83 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            34567899999999999999999999999999999999877655433221  346788999999998877 443      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       .++|+||||||......   ...+.....+++|+.+..++++++.     .+ .++||++||........  ......|
T Consensus        84 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~~~~~~Y  161 (253)
T PRK05867         84 LGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--PQQVSHY  161 (253)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--CCCccch
Confidence             47999999999754211   1122233456899999999998662     22 35799999886542110  0112346


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ .++.... .........         .......+..++|+|+++++
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v-~t~~~~~-~~~~~~~~~---------~~~~~~r~~~p~~va~~~~~  230 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYI-LTELVEP-YTEYQPLWE---------PKIPLGRLGRPEELAGLYLY  230 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCC-CCccccc-chHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence            65553     23444455667999999999955 5554321 111111111         11223467899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+.+.+++|
T Consensus       231 L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        231 LASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             HcCcccCCcCCCeEEECCC
Confidence            998644  45899999986

>PLN02253 xanthoxin dehydrogenase

Probab=99.88  E-value=5.7e-22  Score=176.93  Aligned_cols=226  Identities=17%  Similarity=0.094  Sum_probs=147.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..+++..... ..+++++.+|++|+++++ ++++       
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~~~g   93 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVS-RAVDFTVDKFG   93 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHH-HHHHHHHHHhC
Confidence            4567899999999999999999999999999999998765544433221 346889999999998887 5544       


Q ss_pred             CCcEEEEcCCCCCCC-----CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      ++|+||||||.....     ..++++.+..+++|+.++.++++++.     .+.+++|++||.....    +......|+
T Consensus        94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~  169 (280)
T PLN02253         94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI----GGLGPHAYT  169 (280)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc----cCCCCcccH
Confidence            799999999975321     11223344578899999999988652     2346899999877632    112233577


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHH---HHHHhhcccceeecCCCCc-ccccccHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNT---LLKATAGERRAVLMGQGDK-LIGEVSRIVVAEA  291 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a  291 (333)
                      .+|..     +.+...+...|+++++++||.+ .++......+.   .........  ........ ....++++|+|++
T Consensus       170 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~dva~~  246 (280)
T PLN02253        170 GSKHAVLGLTRSVAAELGKHGIRVNCVSPYAV-PTALALAHLPEDERTEDALAGFR--AFAGKNANLKGVELTVDDVANA  246 (280)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc-cccccccccccccchhhhhhhhH--HHhhcCCCCcCCCCCHHHHHHH
Confidence            66542     2233344456899999999965 44432110000   000000000  00011111 1235789999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCC
Q 019935          292 CIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++..+.  ..|+.+.+++|.
T Consensus       247 ~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        247 VLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             HHhhcCcccccccCcEEEECCch
Confidence            999998654  348899998863

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=6.8e-22  Score=172.58  Aligned_cols=217  Identities=19%  Similarity=0.116  Sum_probs=147.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      +++++||||||+|+||+++++.|+++|++|++++|++.+.+......  ...++.++.+|++|++++. +.++       
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   81 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVR-ALIEAAVEAFG   81 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHHhC
Confidence            45679999999999999999999999999999999987654432211  1456888999999998876 4443       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      .+|+|||++|......   ...+.....++.|+.+..++++++     +.+.++||++||.....    +..+...|+.+
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----~~~~~~~y~~s  157 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----GNPGQTNYSAA  157 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----CCCCCcHhHhH
Confidence            5799999998754211   111112335778999999998866     33678999999986643    23334456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+.+.+.+.+++++++|||.+ +++..............         .......+++++|+|+++++++.
T Consensus       158 k~~~~~~~~~l~~~~~~~~i~~~~i~pg~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~~~~  227 (246)
T PRK05653        158 KAGVIGFTKALALELASRGITVNAVAPGFI-DTDMTEGLPEEVKAEIL---------KEIPLGRLGQPEEVANAVAFLAS  227 (246)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEeCCc-CCcchhhhhHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHcC
Confidence            431     2223334456899999999955 56543321111111100         11123568999999999999997


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ...  ..++.|++++|
T Consensus       228 ~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        228 DAASYITGQVIPVNGG  243 (246)
T ss_pred             chhcCccCCEEEeCCC
Confidence            643  35889999986

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=174.06  Aligned_cols=219  Identities=17%  Similarity=0.172  Sum_probs=143.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ...+|+++||||+|+||++++++|+++|++|++++|+.+..+......  .+.+++++.+|++|++++. +++       
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVK-SFVAQAEEAL   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHhc
Confidence            345579999999999999999999999999999999876554432211  1346788899999999887 444       


Q ss_pred             cCCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||.......   .++.....+++|+.++.++++++     +.+.++||++||...+.    +......|+.
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  161 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR----QRPHMGAYGA  161 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC----CCCCcchHHH
Confidence            368999999997542111   11222334688999999998865     23556899999988775    3334455665


Q ss_pred             HHHHHHHHHHH-------HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYKKMGEDFV-------QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k~~~e~~l-------~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|.  .++.+.       ...|++++++|||.+.++...............   ....++ ......+++++|+|++++.
T Consensus       162 sK~--a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~dva~a~~~  235 (274)
T PRK07775        162 AKA--GLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLE---DWAKWG-QARHDYFLRASDLARAITF  235 (274)
T ss_pred             HHH--HHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHH---HHHHhc-ccccccccCHHHHHHHHHH
Confidence            553  333332       234999999999966333222111111111000   000111 2223568999999999999


Q ss_pred             hccCcccCCcEEEec
Q 019935          295 ALDIEFTEGEIYEIN  309 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~  309 (333)
                      +++.+. .+.+||+.
T Consensus       236 ~~~~~~-~~~~~~~~  249 (274)
T PRK07775        236 VAETPR-GAHVVNME  249 (274)
T ss_pred             HhcCCC-CCCeeEEe
Confidence            998753 35567765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.88  E-value=4.1e-22  Score=175.40  Aligned_cols=217  Identities=13%  Similarity=0.103  Sum_probs=142.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +++|+||||||+|+||+++++.|+++|++|++++|++++.+......    ....+.++.+|++|++++. ++++     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~~   80 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLE-EFLSKSAEK   80 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHH-HHHHHHHHH
Confidence            35689999999999999999999999999999999887665443221    1334667899999999887 5544     


Q ss_pred             --CCcEEEEcCCCCCCC------CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCC------CC
Q 019935          151 --GVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFN------EL  211 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~------~~  211 (333)
                        ++|+|||||+.....      ...++.....+++|+.+...+++++    + .+.++||++||..++...      +.
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence              489999999754211      1111222345677888887777644    2 366799999998764321      11


Q ss_pred             CccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHH
Q 019935          212 PWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRI  286 (333)
Q Consensus       212 ~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  286 (333)
                      +......|+.+|..     +.+...+...|+++++++||.+ +++..    ..+.......         .....+++++
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~-~~~~~----~~~~~~~~~~---------~~~~~~~~~~  226 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGI-LDNQP----EAFLNAYKKC---------CNGKGMLDPD  226 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccc-cCCCC----HHHHHHHHhc---------CCccCCCCHH
Confidence            11122346655532     2223334457899999999965 33321    1111111110         1123578999


Q ss_pred             HHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          287 VVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       287 Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+|+++++++++..  ..|+.+.+++|
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             HhhhhHhheeccccccccCceEEecCC
Confidence            99999999998654  34888888886

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=171.89  Aligned_cols=215  Identities=13%  Similarity=0.070  Sum_probs=141.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+... .......  ...++.++.+|++|++++. +++       .
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   83 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQ-AAMAAAVEAFG   83 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHH-HHHHHHHHHcC
Confidence            457899999999999999999999999999999998532 2221111  1346778999999988776 433       3


Q ss_pred             CCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||....  +  ....+.....+++|+.+...+++++     +.+.++||++||...++.      ....|+.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------~~~~Y~~  157 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------NRVPYSA  157 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------CCCccHH
Confidence            78999999985321  1  1112222345678988888777644     235679999999987642      2235666


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-------------hHHHHHHhhcccceeecCCCCcccccc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-------------LNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      +|..     +.....+...|+++++|+||.+ +++.....             .+.+....         -.......+.
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  227 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGT-EAPPRRVPRNAAPQSEQEKAWYQQIVDQT---------LDSSLMKRYG  227 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcc-CCcchhhHHhhccccccccccHHHHHHHH---------hccCCcccCC
Confidence            5542     2222334456999999999955 66531100             00010000         0122334567


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++|+|+++++++.+..  ..|+.+++++|+
T Consensus       228 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        228 TIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            89999999999997653  458899998863

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.7e-22  Score=176.28  Aligned_cols=195  Identities=15%  Similarity=0.108  Sum_probs=139.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~~  152 (333)
                      ++++++|||||+|+||++++++|+++|++|++++|++++.+......  .+++++.+|++|+++++ ++       +.++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~i   79 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL--GLVVGGPLDVTDPASFA-AFLDAVEADLGPI   79 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--ccceEEEccCCCHHHHH-HHHHHHHHHcCCC
Confidence            45689999999999999999999999999999999987776554322  25788999999998876 33       3478


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |++|||||......   ...+.....+++|+.+..++++++     +.+.++||++||.+.+.    +......|+.+|.
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  155 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI----PVPGMATYCASKH  155 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC----CCCCCcchHHHHH
Confidence            99999999764211   111223346788999999988755     34677999999998765    3344455665553


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           .+.++.+++..|+++++|+||.+ .++....           .       .......+++++|+|++++.++.++
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v-~t~~~~~-----------~-------~~~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFV-NTELIAG-----------T-------GGAKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcC-cchhhcc-----------c-------ccccCCCCCCHHHHHHHHHHHHhCC
Confidence                 23444556678999999999955 3222110           0       0112235789999999999999875


Q ss_pred             c
Q 019935          300 F  300 (333)
Q Consensus       300 ~  300 (333)
                      .
T Consensus       217 ~  217 (273)
T PRK07825        217 R  217 (273)
T ss_pred             C
Confidence            4

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.88  E-value=5e-22  Score=174.05  Aligned_cols=217  Identities=12%  Similarity=0.021  Sum_probs=145.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+... ........ ..++.++.+|++|++++. .++       .
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIK-ALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHH-HHHHHHHHHcC
Confidence            3567899999999999999999999999999999997522 11111111 456889999999998887 433       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+..++++++     +.+ .++||++||...+.    +......|+.
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~~  155 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ----GGIRVPSYTA  155 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc----CCCCCchhHH
Confidence            6899999999754211   111223346788999999999865     223 46999999998775    2223345665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+...|+++++|+||.+ ..+......  ........         .......|++++|+|+++++
T Consensus       156 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~  225 (248)
T TIGR01832       156 SKHGVAGLTKLLANEWAAKGINVNAIAPGYM-ATNNTQALRADEDRNAAIL---------ERIPAGRWGTPDDIGGPAVF  225 (248)
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEECcC-cCcchhccccChHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence            5542     2233333456999999999955 554321100  00000000         01123578999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++....  ..|+++.+++|
T Consensus       226 l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       226 LASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HcCccccCcCCcEEEeCCC
Confidence            998644  34888888775

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-21  Score=172.93  Aligned_cols=220  Identities=19%  Similarity=0.157  Sum_probs=146.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      ++++++||||||+|+||++++++|+++|++|++++|+.....       ..++.++.+|++|+++++ ++       +.+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   77 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-------PEGVEFVAADLTTAEGCA-AVARAVLERLGG   77 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-------CCceeEEecCCCCHHHHH-HHHHHHHHHcCC
Confidence            466789999999999999999999999999999999865321       346788999999988776 33       347


Q ss_pred             CcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCcc-chhhhH
Q 019935          152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWS-IMNLFG  220 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~-~~~~~~  220 (333)
                      +|+||||||......     ...+.....+++|+.+..++++++    + .+.++||++||...+.    +.. ....|+
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~~Y~  153 (260)
T PRK06523         78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL----PLPESTTAYA  153 (260)
T ss_pred             CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC----CCCCCcchhH
Confidence            899999999643111     112233446788999998887754    2 3557899999988765    222 345566


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc-----ccceeecCCCCcccccccHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG-----ERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++........+......     .......-.......+..++|+|+
T Consensus       154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWI-ETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc-cCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            55542     2333445567999999999955 666432111111000000     000000001122345678999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.+..  ..|+.+.+++|
T Consensus       233 ~~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        233 LIAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             HHHHHhCcccccccCceEEecCC
Confidence            9999998643  55889999986

>PRK09135 pteridine reductase; Provisional

Probab=99.88  E-value=1.8e-21  Score=170.42  Aligned_cols=217  Identities=13%  Similarity=0.111  Sum_probs=143.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhc---cCCCCceEEEEccCCCcCCCchhhhc-----
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~---~~~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .++++||||||+|+||++++++|+++|++|++++|+.. ..+.+..   ......+.++.+|++|.+++. .+++     
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   82 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALP-ELVAACVAA   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            35579999999999999999999999999999998643 2222211   111345788999999998887 5544     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                        ++|+||||||......   ..++..+.++++|+.++.++++++.    ...+.++++++....    .+..+...|+.
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~  158 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE----RPLKGYPVYCA  158 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc----CCCCCchhHHH
Confidence              5899999999753211   1122334577899999999999773    223467777765443    25566677886


Q ss_pred             HHHHHHHHHHHH----h--cCCCEEEEEcccccCCCCCCcchHHHH-HHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYKKMGEDFVQ----K--SGLPFTIIRAGRLTDGPYTSYDLNTLL-KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k~~~e~~l~----~--~gi~~~~vrpg~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|.  .+|.+++    +  .++++++++||. ++++.....+.... ......         .....+.+++|+|++++.
T Consensus       159 sK~--~~~~~~~~l~~~~~~~i~~~~v~pg~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~  226 (249)
T PRK09135        159 AKA--ALEMLTRSLALELAPEVRVNAVAPGA-ILWPEDGNSFDEEARQAILAR---------TPLKRIGTPEDIAEAVRF  226 (249)
T ss_pred             HHH--HHHHHHHHHHHHHCCCCeEEEEEecc-ccCccccccCCHHHHHHHHhc---------CCcCCCcCHHHHHHHHHH
Confidence            654  3443332    2  269999999994 47776532222221 111111         112234568999999977


Q ss_pred             hccCcc-cCCcEEEecCCCC
Q 019935          295 ALDIEF-TEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~-~~g~~~~v~~g~~  313 (333)
                      ++.+.. ..|++|++++|..
T Consensus       227 ~~~~~~~~~g~~~~i~~g~~  246 (249)
T PRK09135        227 LLADASFITGQILAVDGGRS  246 (249)
T ss_pred             HcCccccccCcEEEECCCee
Confidence            776532 4689999999753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.4e-22  Score=173.96  Aligned_cols=217  Identities=18%  Similarity=0.120  Sum_probs=148.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~v  155 (333)
                      ++++++++||||+|+||+++++.|+++|++|++++|+.++.+.+..   ..+..++.+|++|.+.+. ++++   ++|+|
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~v~-~~~~~~~~~d~v   81 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG---ETGCEPLRLDVGDDAAIR-AALAAAGAFDGL   81 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HhCCeEEEecCCCHHHHH-HHHHHhCCCCEE
Confidence            4567899999999999999999999999999999999877665543   224677899999988877 5554   58999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||||......   ...++.+..+.+|+.+..++++++.     .+ .++||++||...+.    +......|+.+|.. 
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~y~~sK~a~  157 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV----GLPDHLAYCASKAAL  157 (245)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC----CCCCCcHhHHHHHHH
Confidence            99999754211   1122233456789999999998662     22 37999999988765    33344556655532 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                          +.....+...|++++.++||.+ +++.....+......    ..   +........+++++|+|++++.++..+. 
T Consensus       158 ~~~~~~~a~~~~~~~i~v~~v~pg~v-~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        158 DAITRVLCVELGPHGIRVNSVNPTVT-LTPMAAEAWSDPQKS----GP---MLAAIPLGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEeeCCC-CCchhhhhccCHHHH----HH---HHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence                1122233456899999999955 665432111110000    00   0011233568999999999999998754 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|+.+++++|
T Consensus       230 ~~~G~~~~~~~g  241 (245)
T PRK07060        230 MVSGVSLPVDGG  241 (245)
T ss_pred             CccCcEEeECCC
Confidence             44889999875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.88  E-value=8.5e-22  Score=175.10  Aligned_cols=222  Identities=15%  Similarity=0.044  Sum_probs=147.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+ ++.+.......  ..++.++.+|++|+++++ +++       
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   80 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVK-DFASEIKEQF   80 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHH-HHHHHHHHHc
Confidence            3567899999999999999999999999999999998 55443322211  346888999999998876 433       


Q ss_pred             cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||......    ...+.....+++|+.+...+++++    +...++||++||...+.    +......|+.
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  156 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQA----ADLYRSGYNA  156 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcC----CCCCCchHHH
Confidence            46899999999753211    111222346678999998888865    22226999999988765    2333455666


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH----HHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN----TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +|.     .+.+...+...|+++++|+||.+ .++.......    .+.......     .........+.+++|+|+++
T Consensus       157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~va~~~  230 (272)
T PRK08589        157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTI-ETPLVDKLTGTSEDEAGKTFREN-----QKWMTPLGRLGKPEEVAKLV  230 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcc-cCchhhhhcccchhhHHHHHhhh-----hhccCCCCCCcCHHHHHHHH
Confidence            553     23333445567999999999954 5543211000    000000000     00011233578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.  ..|+.+.+++|.
T Consensus       231 ~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        231 VFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHcCchhcCcCCCEEEECCCc
Confidence            99998643  458899998874

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.4e-22  Score=174.47  Aligned_cols=218  Identities=18%  Similarity=0.109  Sum_probs=149.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+.+++++||||+|+||+++++.|+++|++|++++|++++.+......  ...++.++.+|++|+++++ +++       
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   82 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQ-RFFDAAAAAL   82 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            455789999999999999999999999999999999887655443221  1346888999999998887 554       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||+|......   ...+.....+++|+.++.++++++.     .+.++||++||...+.    +......|+.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~y~~  158 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW----GAPKLGAYVA  158 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc----CCCCcchHHH
Confidence            47899999999754211   1112223346789999999998652     2356999999987754    2333345665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|..     +.+...+...+++++.|+||.+ .++....... .+....         ........+++++|+|++++.+
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~l  228 (250)
T PRK12939        159 SKGAVIGMTRSLARELGGRGITVNAIAPGLT-ATEATAYVPADERHAYY---------LKGRALERLQVPDDVAGAVLFL  228 (250)
T ss_pred             HHHHHHHHHHHHHHHHhhhCEEEEEEEECCC-CCccccccCChHHHHHH---------HhcCCCCCCCCHHHHHHHHHHH
Confidence            5432     2223334456899999999955 5554321111 111111         1123445689999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +..+.  ..|+.+.+++|
T Consensus       229 ~~~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        229 LSDAARFVTGQLLPVNGG  246 (250)
T ss_pred             hCccccCccCcEEEECCC
Confidence            98653  46899999986

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=9.9e-22  Score=172.71  Aligned_cols=216  Identities=13%  Similarity=0.089  Sum_probs=146.6

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hc
Q 019935           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        80 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      +++|+++||||+  ++||++++++|+++|++|++.+|+.+ ......+....++.++.+|++|+++++ ++       +.
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~g   82 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKKSLQKLVDEEDLLVECDVASDESIE-RAFATIKERVG   82 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHHHHHhhccCceeEEeCCCCCHHHHH-HHHHHHHHHhC
Confidence            467899999999  79999999999999999999999843 222222222346788999999998877 43       34


Q ss_pred             CCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 GVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      ++|++|||||....       .+...++....+++|+.+.+.+++++..   ..++||++||.+...    +......|+
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----~~~~~~~Y~  158 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER----AIPNYNVMG  158 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc----cCCcchhhH
Confidence            68999999997531       1112223344678899999999886521   236899999987653    333344566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|+     .+.+..++...|+++++|.||.+ .++.....  .........         ...+...+..++|+|++++
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedva~~~~  228 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAV-KTLAVTGIKGHKDLLKESD---------SRTVDGVGVTIEEVGNTAA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc-cccccccCCChHHHHHHHH---------hcCcccCCCCHHHHHHHHH
Confidence            5553     34455566778999999999955 55432110  111111111         0112345889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++...  ..|+++.+++|
T Consensus       229 ~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        229 FLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHhCcccccccccEEEeCCc
Confidence            9998743  45888888875

>PRK06398 aldose dehydrogenase; Validated

Probab=99.88  E-value=1.8e-21  Score=171.62  Aligned_cols=216  Identities=14%  Similarity=0.059  Sum_probs=144.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+...         ..+++++.+|++|+++++ +++       .+
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~---------~~~~~~~~~D~~~~~~i~-~~~~~~~~~~~~   72 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS---------YNDVDYFKVDVSNKEQVI-KGIDYVISKYGR   72 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc---------cCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            4667899999999999999999999999999999997643         225788999999998877 443       37


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...++....+++|+.++.++++++     +.+.++||++||...+.    +......|+.+|
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  148 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----VTRNAAAYVTSK  148 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc----CCCCCchhhhhH
Confidence            899999999753211   112223345789999999998865     23457999999998765    444555677665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHH----HHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNT----LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      ..     +.+...+.. ++++++|+||.+ .++........    -....  ......+........+..++|+|+++++
T Consensus       149 aal~~~~~~la~e~~~-~i~vn~i~PG~v-~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~eva~~~~~  224 (258)
T PRK06398        149 HAVLGLTRSIAVDYAP-TIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHV--ERKIREWGEMHPMKRVGKPEEVAYVVAF  224 (258)
T ss_pred             HHHHHHHHHHHHHhCC-CCEEEEEecCCc-cchHHhhhhhccccCChhhh--HHHHHhhhhcCCcCCCcCHHHHHHHHHH
Confidence            42     112222222 499999999955 44421100000    00000  0000011122234467889999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++....  ..|+.+.+++|.
T Consensus       225 l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        225 LASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HcCcccCCCCCcEEEECCcc
Confidence            998643  458899999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=171.53  Aligned_cols=216  Identities=18%  Similarity=0.184  Sum_probs=146.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      +.++++++||||+|+||++++++|+++|++|++++|+.+..+.+....  ...++.++.+|++|.++++ .++       
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   81 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAK-AMADATVSAF   81 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHh
Confidence            456789999999999999999999999999999999876554433221  1336778899999998876 443       


Q ss_pred             cCCcEEEEcCCCCCCC------CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhh
Q 019935          150 EGVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      ..+|+||||||.....      ...++.....+++|+.++.++++++.     .+.++||++||..++.       +.+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------~~~~  154 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------YSNF  154 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------Cccc
Confidence            3689999999975311      11223334467899999999998762     2457999999988764       2345


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      |+.+|..     +...+.+...|+++++++||.+ .++..... ...+......         ......+.+++|+|+++
T Consensus       155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~  224 (250)
T PRK07774        155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPI-DTEATRTVTPKEFVADMVK---------GIPLSRMGTPEDLVGMC  224 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcc-cCccccccCCHHHHHHHHh---------cCCCCCCcCHHHHHHHH
Confidence            6655532     1112222335899999999955 44443211 1111111111         11122356799999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +.++....  ..|++|++++|+
T Consensus       225 ~~~~~~~~~~~~g~~~~v~~g~  246 (250)
T PRK07774        225 LFLLSDEASWITGQIFNVDGGQ  246 (250)
T ss_pred             HHHhChhhhCcCCCEEEECCCe
Confidence            99998753  358899999863

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.3e-21  Score=171.82  Aligned_cols=216  Identities=15%  Similarity=0.167  Sum_probs=144.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      +++|++|||||+|+||+++++.|+++|++|+++.+ +.++.+.+.... ..++.++.+|++|++++. ++++       +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~   80 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQ-AMFATATEHFGK   80 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHH-HHHHHHHHHhCC
Confidence            45689999999999999999999999999988765 444444433222 356888999999988877 5443       3


Q ss_pred             -CcEEEEcCCCCCC---------CCCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccch
Q 019935          152 -VTHVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       152 -~d~vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                       +|+||||||....         ....++.....+++|+.+..++++++.     .+.++||++||.....    +..+.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~  156 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----PVVPY  156 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----CCCCc
Confidence             8999999986321         011122223458889999999999762     3457999999976543    33344


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ..|+.+|..     +...+.+...|++++.|+||.+ ..+...... +.+.....         .......+.+++|+|+
T Consensus       157 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~  226 (253)
T PRK08642        157 HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLL-RTTDASAATPDEVFDLIA---------ATTPLRKVTTPQEFAD  226 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeccc-CCchhhccCCHHHHHHHH---------hcCCcCCCCCHHHHHH
Confidence            567766542     2222333456899999999955 443221111 11111111         1122346899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.++.  ..|+.+.+++|
T Consensus       227 ~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        227 AVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHcCchhcCccCCEEEeCCC
Confidence            9999998643  55899999986

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=1.5e-21  Score=170.98  Aligned_cols=217  Identities=17%  Similarity=0.112  Sum_probs=146.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +.+++++||||+|+||++++++|+++|++|+++.+ +++..+++....  .+.++.++.+|++|++++. ++++      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   82 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDAN-RLVEEAVNHF   82 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            45789999999999999999999999999987654 344433332211  1346888999999998887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       .+|+||||||......   ..++.....+++|+.++.++++++.     .+.++||++||..++.    +..+...|+.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~  158 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA----GGFGQTNYSA  158 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC----CCCCCcchHH
Confidence             4899999999854211   1223444567899999999998762     3456999999987653    2233456776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.....+...|+++++++||.+ +++.............         ........+++++|++++++.++
T Consensus       159 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~edva~~~~~~~  228 (247)
T PRK12935        159 AKAGMLGFTKSLALELAKTNVTVNAICPGFI-DTEMVAEVPEEVRQKI---------VAKIPKKRFGQADEIAKGVVYLC  228 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEeCCC-cChhhhhccHHHHHHH---------HHhCCCCCCcCHHHHHHHHHHHc
Confidence            6542     1222333456999999999955 4443211111111110         01123456899999999999999


Q ss_pred             cCcc-cCCcEEEecCC
Q 019935          297 DIEF-TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~-~~g~~~~v~~g  311 (333)
                      +... ..|+.|++++|
T Consensus       229 ~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        229 RDGAYITGQQLNINGG  244 (247)
T ss_pred             CcccCccCCEEEeCCC
Confidence            7643 45899999986

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.6e-21  Score=171.65  Aligned_cols=216  Identities=14%  Similarity=0.087  Sum_probs=145.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .|++|||||+|+||++++++|+++|++|++++|+.. .........  ...++.++.+|++|++++. +++       ..
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHE-AMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHhcCC
Confidence            478999999999999999999999999999998643 222221111  1346889999999988876 443       46


Q ss_pred             CcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcC-----C-C-----CCeEEEEeccccccCCCCCccc
Q 019935          152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----S-S-----LKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~-----~-~-----~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                      +|+||||||......     ...+..+..+++|+.++.++++++.     . +     .++||++||..++.    +..+
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~  156 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM----VSPN  156 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc----CCCC
Confidence            899999999753211     1112234457889999999988651     1 1     56899999988754    3334


Q ss_pred             hhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ...|+.+|..     +.+...+..+|+++++++||.+ +++........+.......        ......|.+++|+|+
T Consensus       157 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~a~  227 (256)
T PRK12745        157 RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLI-KTDMTAPVTAKYDALIAKG--------LVPMPRWGEPEDVAR  227 (256)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCC-cCccccccchhHHhhhhhc--------CCCcCCCcCHHHHHH
Confidence            4567655542     2223334567999999999954 6654322112221111100        112346889999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++..++....  ..|+.|++++|
T Consensus       228 ~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        228 AVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             HHHHHhCCcccccCCCEEEECCC
Confidence            9999987643  34889999886

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=6.8e-22  Score=173.91  Aligned_cols=219  Identities=11%  Similarity=0.042  Sum_probs=150.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +++.+|++|||||+|+||++++++|+++|++|++++|+.++.+.......  ..++.++.+|++|+++++ +++      
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVE-AAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHH-HHHHHHHHh
Confidence            34567899999999999999999999999999999999776655432221  345778899999998877 443      


Q ss_pred             -cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||+|.....   ....++....+++|+.+..++++++.     .+.++||++||.....    +......|+
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~  159 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL----GRDTITPYA  159 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc----CCCCCcchH
Confidence             3689999999975311   11122333467889999999888652     2457999999986643    223334566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++......  ..+.....         ...+...+.+++|+|++++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~-~t~~~~~~~~~~~~~~~~~---------~~~p~~~~~~~~~va~~~~  229 (254)
T PRK08085        160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYF-KTEMTKALVEDEAFTAWLC---------KRTPAARWGDPQELIGAAV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCC-CCcchhhhccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHH
Confidence            5543     23334445567999999999955 555422110  11111111         1123456889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++....  ..|+++.+++|
T Consensus       230 ~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        230 FLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             HHhCccccCCcCCEEEECCC
Confidence            9998643  45888998886

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.87  E-value=1.3e-21  Score=171.62  Aligned_cols=221  Identities=14%  Similarity=0.107  Sum_probs=147.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      +++++|||||+|+||++++++|+++|++|++++|+.+..+.+....  ...++.++.+|++|.++++ +++.       +
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVD-TAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            4689999999999999999999999999999999886655443211  1356889999999998887 5443       6


Q ss_pred             CcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||+|.......   ..+.....+++|+.+..++++++     +.+.++||++||.+++.    +......|+.+|
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~----~~~~~~~Y~~sK  156 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV----GSSGEAVYAACK  156 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc----CCCCCchHHHHH
Confidence            8999999987532111   11122345788999999988865     23668999999998875    233345576665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      ..     +.+...+...++++++++||.+ +++....    +.......... ..+-.......+.+++|+|+++..++.
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (250)
T TIGR03206       157 GGLVAFSKTMAREHARHGITVNVVCPGPT-DTALLDD----ICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS  231 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEecCcc-cchhHHh----hhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence            32     1222223345899999999954 5553211    00000000000 000011122346789999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      .+.  ..|+++.+++|
T Consensus       232 ~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       232 DDASFITGQVLSVSGG  247 (250)
T ss_pred             cccCCCcCcEEEeCCC
Confidence            754  34899999875

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07985 oxidoreductase; Provisional

Probab=99.87  E-value=8.3e-22  Score=177.04  Aligned_cols=218  Identities=13%  Similarity=0.101  Sum_probs=148.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hhhhhhccC--CCCceEEEEccCCCcCCCchhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      .++++++|||||+|+||++++++|+++|++|++..|+.+  ..+.+.+..  .+.++.++.+|++|++++. ++      
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFAR-SLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999876532  222222111  1346778999999988776 33      


Q ss_pred             -hcCCcEEEEcCCCCC----CCCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          149 -FEGVTHVICCTGTTA----FPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       +.++|++|||||...    .....+++....+++|+.++.++++++..   ..++||++||..++.    +......|+
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~----~~~~~~~Y~  200 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ----PSPHLLDYA  200 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc----CCCCcchhH
Confidence             347899999999642    11122333455788999999999997622   126899999998875    333445677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-c-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-D-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++.... . .......         +........+..++|+|++++
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~r~~~pedva~~~~  270 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPI-WTALQISGGQTQDKIPQ---------FGQQTPMKRAGQPAELAPVYV  270 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcC-ccccccccCCCHHHHHH---------HhccCCCCCCCCHHHHHHHHH
Confidence            66642     3333445567999999999955 6664211 0 0111111         111223346788999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++..+.  ..|+++.+++|
T Consensus       271 fL~s~~~~~itG~~i~vdgG  290 (294)
T PRK07985        271 YLASQESSYVTAEVHGVCGG  290 (294)
T ss_pred             hhhChhcCCccccEEeeCCC
Confidence            9998754  44889999986

>PRK08643 acetoin reductase; Validated

Probab=99.87  E-value=1.1e-21  Score=172.65  Aligned_cols=224  Identities=14%  Similarity=0.105  Sum_probs=145.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------cC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.....  ..++.++.+|++|+++++ +++       .+
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~   79 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVF-AAVRQVVDTFGD   79 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHcCC
Confidence            35799999999999999999999999999999998766554432221  356788999999998877 443       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CC-C-CCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|+||||||......   ...+.....+++|+.++.++++++    +. + .++||++||...+.    +......|+.+
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  155 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV----GNPELAVYSST  155 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc----CCCCCchhHHH
Confidence            899999998753211   111222346778999988877755    22 2 36899999987654    22334556665


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccccee---ecCCCCcccccccHHHHHHHHHH
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAV---LMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |..     +.+...+...|+++++|+||.+ .++............. +.....   .+-.......+.+++|+|+++.+
T Consensus       156 K~a~~~~~~~la~e~~~~gi~v~~i~Pg~v-~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  233 (256)
T PRK08643        156 KFAVRGLTQTAARDLASEGITVNAYAPGIV-KTPMMFDIAHQVGENA-GKPDEWGMEQFAKDITLGRLSEPEDVANCVSF  233 (256)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCC-cChhhhHHHhhhcccc-CCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            542     2233344567999999999954 5543211000000000 000000   00011123357889999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++....  ..|+.+.+++|
T Consensus       234 L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        234 LAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             HhCccccCccCcEEEeCCC
Confidence            998653  56899999886

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=172.72  Aligned_cols=223  Identities=17%  Similarity=0.086  Sum_probs=148.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+++++++|||||+|+||+++++.|+++|++|++++|+.++.+.......  ..++.++.+|++|+++++ +++      
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~-~~~~~~~~~   86 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIE-RLAEETLER   86 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            34567899999999999999999999999999999998766544332211  346788999999998886 333      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC------CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       .++|+||||||......   ..++.....+++|+.++.++++++.      .+.++||++||...+........+...|
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence             36899999999743211   1122223456799999999999652      2567999999987654332222233556


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +...+.+...|+++++++||.+ .++.....++.+......         ......+..++|+|+++++
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~va~~~~~  236 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFF-PTKMTRGTLERLGEDLLA---------HTPLGRLGDDEDLKGAALL  236 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcC-CCcchhhhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHH
Confidence            655432     1222333456899999999955 444322222222222211         1122345678999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++....  ..|+.+++.+|
T Consensus       237 l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        237 LASDASKHITGQILAVDGG  255 (259)
T ss_pred             HhCccccCccCCEEEECCC
Confidence            997653  45889998875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.87  E-value=8.1e-22  Score=173.83  Aligned_cols=218  Identities=12%  Similarity=0.067  Sum_probs=147.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .++++++||||||+|+||++++++|+++|++|+++.|+ ++.+.+.+..  ...++.++.+|++|.++++ ++++     
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~-~~~~~~~~~   88 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAE-KVVKEALEE   88 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            34678999999999999999999999999999999998 3332222111  1456889999999998877 4443     


Q ss_pred             --CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|++|||+|.....   ....+..+..+++|+.+..++++++     +.+.+++|++||...+.    +......|+
T Consensus        89 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  164 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ----GGKFVPAYT  164 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc----CCCCchhhH
Confidence              789999999975321   1111223346778999988888755     23567999999998764    223334566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|.     .+.+.+.+...|+++++|+||.+ ..+......  .......         ........+..++|+|++++
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~  234 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYI-KTANTAPIRADKNRNDEI---------LKRIPAGRWGEPDDLMGAAV  234 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccc-cccchhhcccChHHHHHH---------HhcCCCCCCCCHHHHHHHHH
Confidence            5553     23333444567999999999955 554321100  0000000         01122346899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.+..  ..|+++.+.+|
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        235 FLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             HHcChhhcCCCCCEEEECCC
Confidence            9998654  45889999886

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-21  Score=171.83  Aligned_cols=223  Identities=16%  Similarity=0.140  Sum_probs=143.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      |++|||||+|+||++++++|+++|++|++++|++++.+....... ..++.++.+|++|+++++ +++       .++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~-~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLK-NLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHH-HHHHHHHHhcCCCCE
Confidence            479999999999999999999999999999999876554432221 236788999999998887 443       47899


Q ss_pred             EEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----C-CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          155 VICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       155 vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      ||||||......     ..+++....+.+|+.+...+++++     + .+.++||++||..+..    +......|+.+|
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----~~~~~~~y~~sK  155 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----PMPPLVLADVTR  155 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC----CCCCchHHHHHH
Confidence            999999753111     111122223566777766655432     2 2457999999998764    334445566555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-cccc--eeecCCCCcccccccHHHHHHHHHHh
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-GERR--AVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +     .+.+...+...|++++.|.||.+ ..+.....+........ ....  ...+....+...+..++|+|++++++
T Consensus       156 aa~~~~~~~la~e~~~~gI~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL  234 (259)
T PRK08340        156 AGLVQLAKGVSRTYGGKGIRAYTVLLGSF-DTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFL  234 (259)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEeccCcc-cCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHH
Confidence            3     23344455567999999999955 55432111111000000 0000  00001112334688999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +..+.  ..|+++.+++|
T Consensus       235 ~s~~~~~itG~~i~vdgg  252 (259)
T PRK08340        235 LSENAEYMLGSTIVFDGA  252 (259)
T ss_pred             cCcccccccCceEeecCC
Confidence            98754  45888998886

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=172.20  Aligned_cols=217  Identities=12%  Similarity=0.082  Sum_probs=143.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh--------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF--------  149 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~--------  149 (333)
                      ++|+++||||+|+||++++++|+++|++|++.. |+.++.+......  ....+..+.+|+++.++++ ..+        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVE-ALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHH-HHHHHHHHHhh
Confidence            468999999999999999999999999998875 4444443322111  1345678899999987665 221        


Q ss_pred             -----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchhh
Q 019935          150 -----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 -----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                           .++|+||||||......   ...+.....+++|+.+++.+++++ +.  ..++||++||...+.    +......
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----SLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc----CCCCchh
Confidence                 26999999999753211   111222446679999999999865 22  236999999998865    3444556


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      |+.+|+.     +.+...+...|+++++|+||.+ .++....... ......        .........+.+++|+|+++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v-~t~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~~  228 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFI-KTDMNAELLSDPMMKQY--------ATTISAFNRLGEVEDIADTA  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCc-cCchhhhcccCHHHHHH--------HHhcCcccCCCCHHHHHHHH
Confidence            7766642     2333445567999999999955 5554221110 000000        00111234678999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++....  ..|+.+.+++|
T Consensus       229 ~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        229 AFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHcCccccCcCCcEEEecCC
Confidence            99997643  45888998876

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.87  E-value=2e-21  Score=170.65  Aligned_cols=219  Identities=15%  Similarity=0.053  Sum_probs=148.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+.  ...     ...++.++++|++|++++. ++++       .
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~-----~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   76 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ-----EDYPFATFVLDVSDAAAVA-QVCQRLLAETGP   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh-----cCCceEEEEecCCCHHHHH-HHHHHHHHHcCC
Confidence            45678999999999999999999999999999999986  111     1456888999999998887 5543       5


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||+|......   ..++.....+++|+.+..++++++.     .+.++||++||.....    +......|+.+|
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~~sK  152 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV----PRIGMAAYGASK  152 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc----CCCCCchhHHHH
Confidence            899999999754211   1122334467889999999998762     3456899999987654    334445666555


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHH--HHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNT--LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      ..     +.+...+...|+++++++||.+ +++.....+..  ........ ....+....+...+++++|+|+++++++
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~  230 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGST-DTDMQRTLWVDEDGEQQVIAG-FPEQFKLGIPLGKIARPQEIANAVLFLA  230 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcC-cchhhhhhccchhhhhhhhhh-HHHHHhhcCCCcccCCHHHHHHHHHHHh
Confidence            32     2333444557999999999955 66643211000  00000000 0000111233457899999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .+..  ..|+++.+++|
T Consensus       231 ~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        231 SDLASHITLQDIVVDGG  247 (252)
T ss_pred             cchhcCccCcEEEECCC
Confidence            7643  45888888886

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.4e-21  Score=169.58  Aligned_cols=216  Identities=16%  Similarity=0.128  Sum_probs=144.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc----chhhhhhccC--CCCceEEEEccCCCcCCCchhhh---
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~----~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      .+++++++||||+|+||+++++.|+++|++|++++|..    +..+.+....  ...+++++.+|++|+++++ +.+   
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~   81 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATR-AALDAG   81 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHH
Confidence            34568999999999999999999999999999977642    2222221111  1346889999999998887 554   


Q ss_pred             ----cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC------CCCCeEEEEeccccccCCCCCccch
Q 019935          150 ----EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~------~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                          .++|+||||+|.....   ...++.....+++|+.++.++++++.      .+.++||++||...+.    +....
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~  157 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR----GNRGQ  157 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC----CCCCC
Confidence                4689999999976421   11122234467889999999998764      3567999999988765    22334


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|..     +.+...+...|+++++++||.+ +++........  ....         .......+.+++|+|++
T Consensus       158 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v-~t~~~~~~~~~--~~~~---------~~~~~~~~~~~~~va~~  225 (249)
T PRK12827        158 VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAI-NTPMADNAAPT--EHLL---------NPVPVQRLGEPDEVAAL  225 (249)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCc-CCCcccccchH--HHHH---------hhCCCcCCcCHHHHHHH
Confidence            456655532     2222334456999999999955 56543221110  0000         01112235689999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.+..  ..|+.+++++|
T Consensus       226 ~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        226 VAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHcCcccCCccCcEEEeCCC
Confidence            999997643  34889999875

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.87  E-value=4.4e-20  Score=167.34  Aligned_cols=220  Identities=37%  Similarity=0.454  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc-cCCCCceEEEEccCCCcCCCchhhhc----CCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-KQDEETLQVCKGDTRNPKDLDPAIFE----GVT  153 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~~v~~D~~d~~~~~~~~~~----~~d  153 (333)
                      ..+..+|||+||||.+|+-+++.|+++|+.|++++|+..+...+.. .....+...+..|...+.+......+    +..
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            4455789999999999999999999999999999999988877754 22355667777777666555523333    234


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHH
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      +++-++|...  ...  +......++..|+.|+++||+. |++|||++|+++.......++.-....++.++|+.+|+++
T Consensus       156 ~v~~~~ggrp--~~e--d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~  231 (411)
T KOG1203|consen  156 IVIKGAGGRP--EEE--DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFL  231 (411)
T ss_pred             eEEecccCCC--Ccc--cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHH
Confidence            6666666532  111  2344567999999999999865 9999999999988665443433333557888999999999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCC-cEEEecC
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG-EIYEINS  310 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g-~~~~v~~  310 (333)
                      ++.|+++++||||.+..+........      ....+...  ..+..--.+...|+|+.+++++.++...+ .+..++.
T Consensus       232 ~~Sgl~ytiIR~g~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~  302 (411)
T KOG1203|consen  232 QDSGLPYTIIRPGGLEQDTGGQREVV------VDDEKELL--TVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVL  302 (411)
T ss_pred             HhcCCCcEEEeccccccCCCCcceec------ccCccccc--cccccceeeehhhHHHHHHHHHhhhhhccceeEEeec
Confidence            99999999999997643332211100      00111111  11111136888899999999999987555 4444443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.9e-22  Score=177.33  Aligned_cols=217  Identities=15%  Similarity=0.147  Sum_probs=143.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchh------hhc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPA------IFE  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~------~~~  150 (333)
                      +++++|||||+|+||+++++.|+++|++|++++|+++..+......    ...+++++.+|++|+++++ +      .+.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIH-NFQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHH-HHHHHHHhcC
Confidence            4578999999999999999999999999999999887655443211    1346889999999988776 3      124


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ..++.....+++|+.++.++++++    + .+.++||++||.....    +......|+.+
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~~s  156 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV----GFPGLSPYVSS  156 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC----CCCCCchhHHh
Confidence            6899999998754211   111222345678999999988864    3 3568999999976543    23344556655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-------------HHHHHHhhcccceeecCCCCccccccc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-------------NTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      |..     +.+...+...|++++++|||.+ +++......             ........     ...  ......+++
T Consensus       157 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~  228 (280)
T PRK06914        157 KYALEGFSESLRLELKPFGIDVALIEPGSY-NTNIWEVGKQLAENQSETTSPYKEYMKKIQ-----KHI--NSGSDTFGN  228 (280)
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEecCCc-ccchhhccccccccccccccchHHHHHHHH-----HHH--hhhhhccCC
Confidence            432     1222223456999999999955 555321100             00000000     000  112346799


Q ss_pred             HHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          285 RIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      ++|+|++++.+++++.. +..|+++++
T Consensus       229 ~~dva~~~~~~~~~~~~-~~~~~~~~~  254 (280)
T PRK06914        229 PIDVANLIVEIAESKRP-KLRYPIGKG  254 (280)
T ss_pred             HHHHHHHHHHHHcCCCC-CcccccCCc
Confidence            99999999999998654 356888764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.87  E-value=1.4e-21  Score=174.20  Aligned_cols=225  Identities=15%  Similarity=0.094  Sum_probs=149.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++.+++++||||+|+||++++++|+++|++|++++|+.+..+.+.....  +.++.++.+|++|++++. .++       
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~   85 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLE-QARQQILEDF   85 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            4567899999999999999999999999999999998766554433221  346788999999988777 443       


Q ss_pred             cCCcEEEEcCCCCCCCC------------------CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccc
Q 019935          150 EGVTHVICCTGTTAFPS------------------RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVT  206 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~------------------~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~  206 (333)
                      .++|+||||||......                  ...+.....+++|+.+.+.+++++    + .+.++||++||...+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            47899999999643211                  011122335678999998777644    2 345799999999887


Q ss_pred             cCCCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccc
Q 019935          207 KFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIG  281 (333)
Q Consensus       207 ~~~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (333)
                      .    +......|+.+|..     +.+...+...|+++++|+||.+ .++........  ...........+........
T Consensus       166 ~----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v-~t~~~~~~~~~--~~~~~~~~~~~~~~~~p~~r  238 (278)
T PRK08277        166 T----PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFF-LTEQNRALLFN--EDGSLTERANKILAHTPMGR  238 (278)
T ss_pred             C----CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccC-cCcchhhhhcc--ccccchhHHHHHhccCCccC
Confidence            6    44455567766542     2233334456999999999955 55532110000  00000000000111223456


Q ss_pred             cccHHHHHHHHHHhccC-cc--cCCcEEEecCC
Q 019935          282 EVSRIVVAEACIQALDI-EF--TEGEIYEINSV  311 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~-~~--~~g~~~~v~~g  311 (333)
                      +..++|+|+++++++.. ..  ..|+.+.+++|
T Consensus       239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            78999999999999987 43  45889999886

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.9e-21  Score=173.30  Aligned_cols=210  Identities=18%  Similarity=0.190  Sum_probs=137.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh--------cCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--------EGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--------~~~  152 (333)
                      ++++|+||||+|+||++++++|+++|++|++++|+++..+.+.    ..+++++.+|++|+++++ .++        ..+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~-~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AEGLEAFQLDYAEPESIA-ALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCceEEEccCCCHHHHH-HHHHHHHHHcCCCc
Confidence            4578999999999999999999999999999999988776654    346888999999988776 433        358


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHH----hcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVS----ALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~----a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||......   ...+.....+++|+.|..++++    +++ .+.++||++||..++.    +......|+.+|.
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~  153 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV----PMKYRGAYNASKF  153 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC----CCCccchHHHHHH
Confidence            99999998754211   1112223467899999655544    443 3678999999987764    4445566776654


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccc---------eeec-CCCCcccccccHHHHH
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERR---------AVLM-GQGDKLIGEVSRIVVA  289 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~i~v~Dva  289 (333)
                      .     +.+..++++.|+++++|+||.+ ..+........+.........         .... .........++++++|
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~Pg~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  232 (277)
T PRK05993        154 AIEGLSLTLRMELQGSGIHVSLIEPGPI-ETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVY  232 (277)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCc-cCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHH
Confidence            2     2333445678999999999955 444322111111000000000         0000 0000111246899999


Q ss_pred             HHHHHhccCcc
Q 019935          290 EACIQALDIEF  300 (333)
Q Consensus       290 ~a~~~~l~~~~  300 (333)
                      +.+++++..+.
T Consensus       233 ~~i~~a~~~~~  243 (277)
T PRK05993        233 AVLLHALTAPR  243 (277)
T ss_pred             HHHHHHHcCCC
Confidence            99999998754

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=172.29  Aligned_cols=222  Identities=14%  Similarity=0.067  Sum_probs=149.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+.++ .+......  .+.++.++.+|++|+++++ +++    
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~-~~~~~~~   81 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLR-AAVARTE   81 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHH
Confidence            345678899999999999999999999999999999997543 23222111  1346788999999998877 443    


Q ss_pred             ---cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          150 ---EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         .++|+||||||......   ...+..+..+++|+.+.+.+++++     +.+.++||++||.+.+.....  .....
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~  159 (254)
T PRK06114         82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--LLQAH  159 (254)
T ss_pred             HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--CCcch
Confidence               46899999999754211   122233456789999998888854     234579999999876542211  12345


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      |+.+|+     .+.+...+...|+++++|+||.+ .++.... ........         +....+...+..++|+|+++
T Consensus       160 Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i-~t~~~~~~~~~~~~~~---------~~~~~p~~r~~~~~dva~~~  229 (254)
T PRK06114        160 YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYT-ATPMNTRPEMVHQTKL---------FEEQTPMQRMAKVDEMVGPA  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCc-cCcccccccchHHHHH---------HHhcCCCCCCcCHHHHHHHH
Confidence            665553     23344455667999999999954 5654321 11111110         01112334678899999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.+..  ..|+++.+++|
T Consensus       230 ~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        230 VFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHHcCccccCcCCceEEECcC
Confidence            99998644  45899999886

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.87  E-value=4.2e-21  Score=167.73  Aligned_cols=217  Identities=18%  Similarity=0.130  Sum_probs=147.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      ++++++++||||+|+||++++++|+++|+.|++..|+.++.+.+.... ..++.++.+|++|.++++ ++       +.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   80 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLSDRDEVK-ALGQKAEADLEG   80 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            456789999999999999999999999999999989877666544322 346888999999988877 44       346


Q ss_pred             CcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.....   ....+.....+++|+.+..++++++     +.+.++||++||......    ......|+.+|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sk  156 (245)
T PRK12936         81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG----NPGQANYCASK  156 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC----CCCCcchHHHH
Confidence            89999999975321   1112233446788999999988865     235679999999865431    12233465554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.+...+...|+++++++||.+ .++.............         ........+.+++|+++++++++..
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ia~~~~~l~~~  226 (245)
T PRK12936        157 AGMIGFSKSLAQEIATRNVTVNCVAPGFI-ESAMTGKLNDKQKEAI---------MGAIPMKRMGTGAEVASAVAYLASS  226 (245)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcC-cCchhcccChHHHHHH---------hcCCCCCCCcCHHHHHHHHHHHcCc
Confidence            3     22333445567999999999954 4443221111000000         0112234577899999999999976


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      +.  ..|+.+++++|
T Consensus       227 ~~~~~~G~~~~~~~g  241 (245)
T PRK12936        227 EAAYVTGQTIHVNGG  241 (245)
T ss_pred             cccCcCCCEEEECCC
Confidence            54  35899999986

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-21  Score=169.88  Aligned_cols=214  Identities=14%  Similarity=0.137  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+.++.  .    ...+++++.+|++|+++++ +++       .+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~----~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   75 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--V----DGRPAEFHAADVRDPDQVA-ALVDAIVERHGR   75 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--h----cCCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            45679999999999999999999999999999999987541  1    1457889999999998887 544       35


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----C-CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|+||||||......   ...+..+..+++|+.++.++++++.     . +.++||++||...+.    +......|+.+
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~s  151 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR----PSPGTAAYGAA  151 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC----CCCCCchhHHH
Confidence            799999999753211   1112233467899999999998652     1 346999999998765    33445567765


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+... +++++|+||.+ .++........       ......+........+.+++|+|++++++++
T Consensus       152 K~a~~~l~~~la~e~~~~-i~v~~i~Pg~v-~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~  222 (252)
T PRK07856        152 KAGLLNLTRSLAVEWAPK-VRVNAVVVGLV-RTEQSELHYGD-------AEGIAAVAATVPLGRLATPADIAWACLFLAS  222 (252)
T ss_pred             HHHHHHHHHHHHHHhcCC-eEEEEEEeccc-cChHHhhhccC-------HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence            542     1112222234 99999999954 55432110000       0000001111233457889999999999998


Q ss_pred             Ccc--cCCcEEEecCCC
Q 019935          298 IEF--TEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g~  312 (333)
                      ...  ..|+.+.+.+|.
T Consensus       223 ~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        223 DLASYVSGANLEVHGGG  239 (252)
T ss_pred             cccCCccCCEEEECCCc
Confidence            643  558999999874

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-21  Score=176.75  Aligned_cols=204  Identities=14%  Similarity=0.115  Sum_probs=142.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++.+++||||||+|+||++++++|+++|++|++++|++++.+++.+...  +.++.++.+|++|+++++ +++       
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   82 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVK-ALATQAASFG   82 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHH-HHHHHHHHhc
Confidence            4567899999999999999999999999999999999877665443221  456778899999999887 443       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|++|||||......   ...+.....+++|+.++.++++++     +.+.++||++||...+.    +.+....|+.
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~----~~p~~~~Y~a  158 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA----AQPYAAAYSA  158 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC----CCCCchhHHH
Confidence            57899999999754221   112223346889999999988865     23557999999988765    3334556776


Q ss_pred             HHH-----HHHHHHHHHh-cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKY-----KKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|.     ...+..++.+ .|++++.|+||.+ .++........     . ..      .......+.+++|+|++++++
T Consensus       159 sKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v-~T~~~~~~~~~-----~-~~------~~~~~~~~~~pe~vA~~il~~  225 (330)
T PRK06139        159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFM-DTPGFRHGANY-----T-GR------RLTPPPPVYDPRRVAKAVVRL  225 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEEEEEecCCc-cCccccccccc-----c-cc------cccCCCCCCCHHHHHHHHHHH
Confidence            664     2333344444 3899999999954 66543210000     0 00      011123467999999999999


Q ss_pred             ccCcc
Q 019935          296 LDIEF  300 (333)
Q Consensus       296 l~~~~  300 (333)
                      ++++.
T Consensus       226 ~~~~~  230 (330)
T PRK06139        226 ADRPR  230 (330)
T ss_pred             HhCCC
Confidence            98753

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=7.4e-21  Score=166.93  Aligned_cols=223  Identities=15%  Similarity=0.157  Sum_probs=145.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ++.+++||||||+|+||++++++|+++|++|++..|+. ..........  .+.++.++.+|+++++++. .++      
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   81 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCE-TLAKATIDR   81 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHH-HHHHHHHHH
Confidence            44568999999999999999999999999998877643 2222211110  0345678899999988776 443      


Q ss_pred             -cCCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 -EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                       .++|+||||||.......   ..+..+..+++|+.+..++++++..   ..++||++||..++.    +..+.+.|+.+
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  157 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----PAYGLSIYGAM  157 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC----CCCCchHHHHH
Confidence             478999999997432111   1111134578899999998886632   236899999998876    55666778876


Q ss_pred             HHH--HHHHHHHHh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          223 KYK--KMGEDFVQK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       223 k~k--~~~e~~l~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      |..  ..++.+.++  .++++++++||.+ .++....... +....  ...  ..........+++++|+|++++.++..
T Consensus       158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i-~t~~~~~~~~-~~~~~--~~~--~~~~~~~~~~~~~~~dva~~~~~~~~~  231 (252)
T PRK06077        158 KAAVINLTKYLALELAPKIRVNAIAPGFV-KTKLGESLFK-VLGMS--EKE--FAEKFTLMGKILDPEEVAEFVAAILKI  231 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCCEEEEEeeCCc-cChHHHhhhh-ccccc--HHH--HHHhcCcCCCCCCHHHHHHHHHHHhCc
Confidence            643  222222222  2799999999955 5543211000 00000  000  000112234689999999999999987


Q ss_pred             cccCCcEEEecCCC
Q 019935          299 EFTEGEIYEINSVE  312 (333)
Q Consensus       299 ~~~~g~~~~v~~g~  312 (333)
                      +...|++|++++|.
T Consensus       232 ~~~~g~~~~i~~g~  245 (252)
T PRK06077        232 ESITGQVFVLDSGE  245 (252)
T ss_pred             cccCCCeEEecCCe
Confidence            66668999999974

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.2e-21  Score=170.79  Aligned_cols=213  Identities=14%  Similarity=0.069  Sum_probs=135.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-CCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-~~d~vi~~  158 (333)
                      +++||||||+|+||++++++|+++|++|++++|+++....+....  ...++.++.+|++|++++. .++. ++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRA-QAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHH-HHhcCCCCEEEEC
Confidence            578999999999999999999999999999999876654432211  1346888999999999888 6665 89999999


Q ss_pred             CCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-----
Q 019935          159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----  225 (333)
Q Consensus       159 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-----  225 (333)
                      ||......   ...+.....+++|+.+..++++++     +.+.++||++||......    ......|+.+|..     
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~----~~~~~~Y~~sK~a~~~~~  156 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT----GPFTGAYCASKHALEAIA  156 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC----CCCcchhHHHHHHHHHHH
Confidence            99754211   011112235678888887776643     335689999999876431    2233456544432     


Q ss_pred             HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 ~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      +.++.+++..|+++++|+||.+ ..+........+.....................++.++|+++.++.++..+.
T Consensus       157 ~~l~~~~~~~gi~~~~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        157 EAMHAELKPFGIQVATVNPGPY-LTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHHhcCcEEEEEecCcc-cccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCCC
Confidence            2233445567999999999965 2222111111111100000110111112223356889999999999987653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.86  E-value=1.7e-21  Score=170.74  Aligned_cols=202  Identities=17%  Similarity=0.162  Sum_probs=136.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~v  155 (333)
                      |+|+||||+|+||+++++.|+++|++|++++|++++.+.+.... ..+++++.+|++|.++++ +++       .++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~-~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIE-EMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCCCHHHHH-HHHHHHHHHcCCCCEE
Confidence            47999999999999999999999999999999987766554332 346888999999998877 444       379999


Q ss_pred             EEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          156 ICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||||.....    ...++.....+++|+.++.++++++     +.+.++||++||.+...    +......|+.+|.. 
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~~~  154 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----PYAGGNVYGATKAFV  154 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC----CCCCCchhHHHHHHH
Confidence            9999974211    1122333456788999987777754     23668999999987654    44455567766543 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCC-cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTS-YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                          +.+...+...|+++++|+||.+ .+.... ......      .........   ...++.++|+|+++++++..+.
T Consensus       155 ~~~~~~l~~~~~~~~i~v~~v~pg~i-~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        155 RQFSLNLRTDLHGTAVRVTDIEPGLV-GGTEFSNVRFKGD------DGKAEKTYQ---NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCee-cccccchhhccCc------HHHHHhhcc---ccCCCCHHHHHHHHHHHhcCCC
Confidence                2222333456899999999955 433211 000000      000000001   1246799999999999998764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=2.5e-21  Score=171.93  Aligned_cols=217  Identities=13%  Similarity=0.078  Sum_probs=145.4

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchh---hhhhccCCCCceEEEEccCCCcCCCchhh------
Q 019935           80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        80 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      +++|++|||||++  +||++++++|+++|++|++.+|+....   +.+....  ....++.+|++|+++++ ++      
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--g~~~~~~~Dv~d~~~v~-~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--GSDFVLPCDVEDIASVD-AVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--CCceEEeCCCCCHHHHH-HHHHHHHH
Confidence            4678999999997  999999999999999999998875322   2222111  12356899999998887 43      


Q ss_pred             -hcCCcEEEEcCCCCCCC-------CCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchh
Q 019935          149 -FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                       +..+|++|||||.....       +...+.....+++|+.+.+++++++ ..  ..++||++||.+...    +.+...
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~  157 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR----VMPNYN  157 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc----cCCccc
Confidence             35789999999975311       1122333456789999999998855 21  126899999987643    223334


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|+     .+.+..++...||+++.|.||.+ ..+......+  .......         ...+...+..++|+|+
T Consensus       158 ~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~peeva~  227 (271)
T PRK06505        158 VMGVAKAALEASVRYLAADYGPQGIRVNAISAGPV-RTLAGAGIGDARAIFSYQQ---------RNSPLRRTVTIDEVGG  227 (271)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCc-cccccccCcchHHHHHHHh---------hcCCccccCCHHHHHH
Confidence            5665554     35555667778999999999955 4443211000  0000000         0112335678999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++++++..  ..|+.+.+++|..
T Consensus       228 ~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        228 SALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             HHHHHhCccccccCceEEeecCCcc
Confidence            9999998644  4588999988743

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.86  E-value=3.4e-21  Score=170.34  Aligned_cols=224  Identities=13%  Similarity=0.060  Sum_probs=148.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      ++++++|||||+|+||++++++|+++|++|++++|++++.+.+.... ..++.++.+|++|+++++ +++       .++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVTSYADNQ-RAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHH-HHHHHHHHhcCCC
Confidence            46789999999999999999999999999999999987766654332 346788999999988877 443       468


Q ss_pred             cEEEEcCCCCCC--C--CCCCCC----CCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          153 THVICCTGTTAF--P--SRRWDG----DNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~--~--~~~~~~----~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      |+||||||....  +  ...++.    .+..+++|+.+.+.+++++.    ...+++|++||...+.    +......|+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~  157 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY----PGGGGPLYT  157 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC----CCCCCchhH
Confidence            999999997531  1  111111    23467899999999998652    2236899999988765    333444577


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHH-HHhhccc-ceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL-KATAGER-RAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+.. +++++.|.||.+ ..+.......... ....... ....+....+...+..++|+|++++
T Consensus       158 ~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~  235 (263)
T PRK06200        158 ASKHAVVGLVRQLAYELAP-KIRVNGVAPGGT-VTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CcEEEEEeCCcc-ccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhh
Confidence            65542     222233333 599999999955 4443211000000 0000000 0000111223456889999999999


Q ss_pred             HhccCc-c--cCCcEEEecCC
Q 019935          294 QALDIE-F--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~-~--~~g~~~~v~~g  311 (333)
                      +++.++ .  ..|+.+.+++|
T Consensus       236 fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             heecccccCcccceEEEEcCc
Confidence            999865 3  45889999886

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=2.7e-21  Score=168.01  Aligned_cols=211  Identities=16%  Similarity=0.082  Sum_probs=143.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~~~~d~vi~  157 (333)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.....       ..++.++.+|++++ +.+. +.+.++|+|||
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~-~~~~~id~lv~   73 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDDLEPLF-DWVPSVDILCN   73 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHHHHHHH-HhhCCCCEEEE
Confidence            356789999999999999999999999999999999754321       34678899999997 3333 34568999999


Q ss_pred             cCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHHH----
Q 019935          158 CTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (333)
Q Consensus       158 ~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~----  224 (333)
                      |||....  +  ....+.....+++|+.++.++++++.     .+.++||++||...+.    +......|+.+|.    
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~~~  149 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV----AGGGGAAYTASKHALAG  149 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc----CCCCCcccHHHHHHHHH
Confidence            9996421  1  11122334467889999999998662     2456899999987754    2223345665543    


Q ss_pred             -HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          225 -KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       225 -k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                       .+.+...+...|+++++|+||.+ +++.....+.  .+.....         .......+..++|+|+++++++.+.. 
T Consensus       150 ~~~~la~~~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~~l~s~~~~  219 (235)
T PRK06550        150 FTKQLALDYAKDGIQVFGIAPGAV-KTPMTAADFEPGGLADWVA---------RETPIKRWAEPEEVAELTLFLASGKAD  219 (235)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCc-cCcccccccCchHHHHHHh---------ccCCcCCCCCHHHHHHHHHHHcChhhc
Confidence             22333344556999999999955 6664322111  1111111         11234568899999999999997643 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|+++.+++|
T Consensus       220 ~~~g~~~~~~gg  231 (235)
T PRK06550        220 YMQGTIVPIDGG  231 (235)
T ss_pred             cCCCcEEEECCc
Confidence             45788888875

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.86  E-value=6.3e-22  Score=175.50  Aligned_cols=204  Identities=21%  Similarity=0.250  Sum_probs=135.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchh---hhh---hc------cCCCCceEEEEccCCCcCC------
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKA---TTL---FG------KQDEETLQVCKGDTRNPKD------  143 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~---~~~---~~------~~~~~~~~~v~~D~~d~~~------  143 (333)
                      ++||+||||||+|++++++|+.+ ..+|+|++|..+..   +.+   ..      +....+++++.+|+..++-      
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999999987 47999999965421   111   11      1226789999999986542      


Q ss_pred             CchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC-------C---
Q 019935          144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL-------P---  212 (333)
Q Consensus       144 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~-------~---  212 (333)
                      +. ++.+.+|.|||||+..+    ...++..+...|+.|+..+++.+.. ..|.+.|+||++++.....       .   
T Consensus        81 ~~-~La~~vD~I~H~gA~Vn----~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~  155 (382)
T COG3320          81 WQ-ELAENVDLIIHNAALVN----HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEIS  155 (382)
T ss_pred             HH-HHhhhcceEEecchhhc----ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccc
Confidence            22 44567999999999875    2345677899999999999996655 4778999999999753210       0   


Q ss_pred             ----ccchhhhHHHHHHHHHHHHHHh---cCCCEEEEEcccccCCCC-CCcchHHHH-HHhhcccceeecCCCCcccccc
Q 019935          213 ----WSIMNLFGVLKYKKMGEDFVQK---SGLPFTIIRAGRLTDGPY-TSYDLNTLL-KATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       213 ----~~~~~~~~~~k~k~~~e~~l~~---~gi~~~~vrpg~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                          ......-||.++|+.+|..+++   .|++++|+|||.++.... +.++...|. +...+--....+++.....+.+
T Consensus       156 ~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~  235 (382)
T COG3320         156 PTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDML  235 (382)
T ss_pred             ccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhC
Confidence                0111223566889999988875   489999999997753333 234444333 2222222333333333334444


Q ss_pred             cHHHHHHH
Q 019935          284 SRIVVAEA  291 (333)
Q Consensus       284 ~v~Dva~a  291 (333)
                      .+++++++
T Consensus       236 p~~~v~~~  243 (382)
T COG3320         236 PVDHVARA  243 (382)
T ss_pred             ccceeeEE
Confidence            44443333

>PRK05717 oxidoreductase; Validated

Probab=99.86  E-value=1.7e-20  Score=165.06  Aligned_cols=219  Identities=15%  Similarity=0.115  Sum_probs=146.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ..++++|+++||||+|+||+++++.|+++|++|++++|+.++........ ..++.++.+|++|.+++. +++       
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   82 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVADEAQVA-AGVAEVLGQF   82 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCCCHHHHH-HHHHHHHHHh
Confidence            34567889999999999999999999999999999998876555443222 356888999999988775 332       


Q ss_pred             cCCcEEEEcCCCCCCCCC-----CCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      ..+|+||||||.......     ..+.....+++|+.++.++++++.    ...++||++||...+.    +......|+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~----~~~~~~~Y~  158 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ----SEPDTEAYA  158 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC----CCCCCcchH
Confidence            358999999997532111     112223567899999999999773    2346899999987754    233345677


Q ss_pred             HHHHH--HHHHHHHHh--cCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK--KMGEDFVQK--SGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k--~~~e~~l~~--~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..  ..++.+.++  .++++++|+||.+ +++...... ..+.....         .......+.+++|+|.+++++
T Consensus       159 ~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK05717        159 ASKGGLLALTHALAISLGPEIRVNAVSPGWI-DARDPSQRRAEPLSEADH---------AQHPAGRVGTVEDVAAMVAWL  228 (255)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEecccC-cCCccccccchHHHHHHh---------hcCCCCCCcCHHHHHHHHHHH
Confidence            65542  122222222  2599999999955 565422110 11100000         011223578999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|+.+.+++|
T Consensus       229 ~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        229 LSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             cCchhcCccCcEEEECCC
Confidence            97643  34888988775

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.2e-21  Score=170.53  Aligned_cols=218  Identities=15%  Similarity=0.063  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++++++||||+|+||++++++|+++|++|++++|++++.+......  .+.++.++.+|++|.++++ +++       
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~-~~~~~~~~~~   82 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVK-ALVEQTIAAY   82 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHHh
Confidence            356789999999999999999999999999999999987654432211  1456888999999988877 444       


Q ss_pred             cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|+||||+|.....    ....+.....+++|+.+..++++++     +.+.++||++||...+.    +......|+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~  158 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG----AAPKMSIYA  158 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc----CCCCCchhH
Confidence            3679999999975311    1122233446789999998887743     23457999999998876    444556677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|..     +.+...+...|+++++|+||.+ .++......   ......         +-.......+.+++|+++.+
T Consensus       159 ~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~p~~ia~~~  228 (253)
T PRK06172        159 ASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVI-DTDMFRRAYEADPRKAEF---------AAAMHPVGRIGKVEEVASAV  228 (253)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCc-cChhhhhhcccChHHHHH---------HhccCCCCCccCHHHHHHHH
Confidence            66642     2223333456899999999955 444321100   000000         00112223567899999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.+..  ..|+.+.+++|
T Consensus       229 ~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        229 LYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             HHHhCccccCcCCcEEEECCC
Confidence            99998753  45899999986

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=3e-21  Score=169.93  Aligned_cols=219  Identities=12%  Similarity=0.040  Sum_probs=150.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ..+++++++||||+|+||++++++|+++|++|++++|+++..+++....  .+.++.++.+|++|++++. +++      
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   85 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVA-AAFARIDAE   85 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHh
Confidence            3467899999999999999999999999999999999976655443221  1446889999999998877 444      


Q ss_pred             -cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||+|.....   +...+..+..+++|+.++.++++++     +.+.++||++||.....    +......|+
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~  161 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV----ARAGDAVYP  161 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc----CCCCccHhH
Confidence             3679999999975421   1112223345788999999999755     23568999999987754    223345566


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++......  ..+.....         .......|++++|++++++
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~  231 (256)
T PRK06124        162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYF-ATETNAAMAADPAVGPWLA---------QRTPLGRWGRPEEIAGAAV  231 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCc-cCcchhhhccChHHHHHHH---------hcCCCCCCCCHHHHHHHHH
Confidence            55532     2233344556999999999954 665422110  11111111         1112346899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.++.  ..|+.+.+++|
T Consensus       232 ~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        232 FLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHcCcccCCcCCCEEEECCC
Confidence            9998764  34888888875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.5e-21  Score=170.70  Aligned_cols=222  Identities=11%  Similarity=0.055  Sum_probs=146.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +++++++|||||+|+||++++++|+++|++|++++|+++.. ......  .+.++.++.+|++|+++++ +.++      
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCR-DAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHhc
Confidence            46678999999999999999999999999999999987654 221111  1456889999999998887 5543      


Q ss_pred             -CCcEEEEcCCCCCCCCC--CCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          151 -GVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                       ++|+||||||.......  ..+.....+++|+.+..++++++    +...++||++||..+..    +......|+.+|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~sK  157 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT----GQGGTSGYAAAK  157 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc----CCCCCchhHHHH
Confidence             68999999996431110  11223345778999999988865    23447899999987754    233445676655


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccc-e-eecCCCCcccccccHHHHHHHHHHhc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERR-A-VLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      ..     +.+...+...|++++.|+||.+ +++....    +......... . ...........+++++|+|+++++++
T Consensus       158 ~a~~~~~~~l~~e~~~~~i~v~~v~pg~v-~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (258)
T PRK08628        158 GAQLALTREWAVALAKDGVRVNAVIPAEV-MTPLYEN----WIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLL  232 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcc-CCHHHHH----HhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHh
Confidence            42     2223334457999999999965 6653211    1110000000 0 00000001125788999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      ....  ..|+.+.+++|
T Consensus       233 ~~~~~~~~g~~~~~~gg  249 (258)
T PRK08628        233 SERSSHTTGQWLFVDGG  249 (258)
T ss_pred             ChhhccccCceEEecCC
Confidence            8753  45788888874

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.7e-21  Score=168.99  Aligned_cols=219  Identities=16%  Similarity=0.148  Sum_probs=148.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +++++++++||||+|+||++++++|+++|++|++++|+.++.+.+.....  ..++.++++|+.|.++++ +++      
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQID-ALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            35667899999999999999999999999999999998766554432211  345778999999988876 443      


Q ss_pred             -cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       ..+|+||||||.....    ....+.....+++|+.+..++++++    + .+.+++|++||.....    +..+...|
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y  158 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS----PGDFQGIY  158 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC----CCCCCcch
Confidence             3689999999864211    1112223346788999999888765    2 3567999999987654    33445567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|..     +.....+...|++++.|+||.+ ..+......  ........         .......+..++|+|+++
T Consensus       159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~  228 (252)
T PRK07035        159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLT-DTKFASALFKNDAILKQAL---------AHIPLRRHAEPSEMAGAV  228 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccc-cCcccccccCCHHHHHHHH---------ccCCCCCcCCHHHHHHHH
Confidence            655532     2222333456999999999955 444321111  01111100         111234578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.+..  ..|+++.+.+|
T Consensus       229 ~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        229 LYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99998754  45889999875

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.5e-21  Score=165.92  Aligned_cols=217  Identities=17%  Similarity=0.166  Sum_probs=145.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+..++..... ..++.++++|++|.+++. .+       +.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   80 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAGDVAAQK-ALAQALAEAFGR   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCCCHHHHH-HHHHHHHHHhCC
Confidence            345789999999999999999999999999999999876655544332 446788999999987765 33       347


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +|+||||||......   ...+.....+++|+.++.++++++.   ....++|++||.....    +......|+.+|..
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~----~~~~~~~Y~~sK~a  156 (249)
T PRK06500         81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI----GMPNSSVYAASKAA  156 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc----CCCCccHHHHHHHH
Confidence            899999999754211   1223334578899999999999773   2235788888765432    22344567765542


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                           +.....+...|+++++++||.+ +++....      ....+.+...         .......+.+++|+|+++++
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~  226 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQ---------ALVPLGRFGTPEEIAKAVLY  226 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcC-CCHHHHhhccCccchHHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence                 1111223446999999999955 6653210      0111111111         11122346789999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.++.  ..|+.+.+++|
T Consensus       227 l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        227 LASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HcCccccCccCCeEEECCC
Confidence            998644  34788888876

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.2e-20  Score=165.99  Aligned_cols=215  Identities=16%  Similarity=0.136  Sum_probs=145.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      +++|+++||||+|+||+++++.|+++|++|+++.|+.+. .+.+.    ..++.++.+|++|+++++ +++       .+
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~   79 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVK-KSKEVVEKEFGR   79 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHH-HHHHHHHHHcCC
Confidence            457899999999999999999999999999988765433 33332    225788999999998887 443       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..+++.   +......|+.+|
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~~~~~~~Y~asK  156 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT---AAEGTTFYAITK  156 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC---CCCCccHhHHHH
Confidence            899999999753211   112233456788999987776643    3 35579999999887642   122334566655


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      ..     +.+...+...|+++++|+||.+ ..+.....     ...+...         +........+.+++|+|++++
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~va~~~~  226 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWV-ETDMTLSGKSQEEAEKLREL---------FRNKTVLKTTGKPEDIANIVL  226 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCC-CCchhhcccCccchHHHHHH---------HHhCCCcCCCcCHHHHHHHHH
Confidence            32     3334445567999999999955 44432100     0001000         111223456788999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++....  ..|+.+.+++|.
T Consensus       227 ~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        227 FLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHcChhhcCCCCCEEEECCCe
Confidence            9998754  458999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.2e-21  Score=167.11  Aligned_cols=215  Identities=13%  Similarity=0.088  Sum_probs=142.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +.++|++|||||+|+||++++++|+++|++|+++.|. .+..+.+....  .+.+++++.+|++|.+++. +++      
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~~   84 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVR-ALVARASAA   84 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            3467899999999999999999999999999988764 33333322111  1456888999999988877 544      


Q ss_pred             -cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC----C-CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----S-SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~----~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||.....   ...++.....+++|+.+++++++++.    . ..+++|+++|...+.    +.+....|+
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~----~~p~~~~Y~  160 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN----LNPDFLSYT  160 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----CCCCchHHH
Confidence             3589999999975321   11222334567899999999998662    1 346889988876544    222234577


Q ss_pred             HHHHHHHHHHH---H-Hh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKYKKMGEDF---V-QK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~k~~~e~~---l-~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.  .++.+   + ++  .++++++++||.+..+....  ...+.....          ........+++|+|+++++
T Consensus       161 ~sK~--a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~--~~~~~~~~~----------~~~~~~~~~~~d~a~~~~~  226 (258)
T PRK09134        161 LSKA--ALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS--PEDFARQHA----------ATPLGRGSTPEEIAAAVRY  226 (258)
T ss_pred             HHHH--HHHHHHHHHHHHhcCCcEEEEeecccccCCcccC--hHHHHHHHh----------cCCCCCCcCHHHHHHHHHH
Confidence            6553  22222   2 11  24999999999663222111  111211111          0112235789999999999


Q ss_pred             hccCcccCCcEEEecCCC
Q 019935          295 ALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~  312 (333)
                      +++.+...|+.+.+++|.
T Consensus       227 ~~~~~~~~g~~~~i~gg~  244 (258)
T PRK09134        227 LLDAPSVTGQMIAVDGGQ  244 (258)
T ss_pred             HhcCCCcCCCEEEECCCe
Confidence            999877778999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-21  Score=171.55  Aligned_cols=210  Identities=17%  Similarity=0.187  Sum_probs=141.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~d~  154 (333)
                      +++|+||||+|+||++++++|+++|++|++++|++++...      ..+++++++|++|+++++ ++++       ++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~-~~~~~~~~~~g~~d~   76 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQ-AAVDEVIARAGRIDV   76 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHH-HHHHHHHHhCCCCCE
Confidence            4689999999999999999999999999999998765432      346889999999999888 5554       5799


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      ||||||......   ..++.....+++|+.|+.++++++     +.+.++||++||...+.    +......|+.+|.. 
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~a~  152 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL----PAPYMALYAASKHAV  152 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC----CCCCccHHHHHHHHH
Confidence            999999864211   112233456789999999999864     34778999999987765    33344567665542 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                          +.+..++++.|+++++++||.+ .++.....      ...+.........  ..  .........++|+|+.++++
T Consensus       153 ~~~~~~l~~el~~~gi~v~~v~pg~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~va~~~~~~  227 (270)
T PRK06179        153 EGYSESLDHEVRQFGIRVSLVEPAYT-KTNFDANAPEPDSPLAEYDRERAVVSK--AV--AKAVKKADAPEVVADTVVKA  227 (270)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeCCCc-ccccccccCCCCCcchhhHHHHHHHHH--HH--HhccccCCCHHHHHHHHHHH
Confidence                2333445667999999999955 44432110      0000000000000  00  01122457889999999999


Q ss_pred             ccCcccCCcEEEe
Q 019935          296 LDIEFTEGEIYEI  308 (333)
Q Consensus       296 l~~~~~~g~~~~v  308 (333)
                      +..+.. +..|..
T Consensus       228 ~~~~~~-~~~~~~  239 (270)
T PRK06179        228 ALGPWP-KMRYTA  239 (270)
T ss_pred             HcCCCC-CeeEec
Confidence            987542 344544

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.2e-21  Score=168.44  Aligned_cols=224  Identities=18%  Similarity=0.131  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      ++++++++||||+|+||++++++|+++|++|++++|++++.+......    ...++.++.+|++|+++++ ++      
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~   83 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVA-AFAAAVEA   83 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999999887655432211    1246788999999998876 33      


Q ss_pred             -hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CC-CCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       +.++|+||||||......   ...+.....+++|+.+..++++++    +. +.++||++||...+.    +......|
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~y  159 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ----PEPHMVAT  159 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC----CCCCchHh
Confidence             347899999999753211   111122345678888888887754    22 457999999988765    22333456


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce------eecCCCCcccccccHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA------VLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~v~Dv  288 (333)
                      +.+|.     .+.+...+.+.|+++++|+||.+ ..+....   .+..........      ...-...+...+..++|+
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v-~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~v  235 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLV-ESGQWRR---RYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEA  235 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc-ccchhhh---HHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHH
Confidence            55553     23344555667999999999955 4443111   000000000000      000011233467899999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+++++++.+..  ..|+++.+++|
T Consensus       236 a~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        236 ARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             HHHHHHHhCchhcccccceEEEcCc
Confidence            999999998643  45889999886

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.86  E-value=5.1e-21  Score=204.92  Aligned_cols=238  Identities=17%  Similarity=0.154  Sum_probs=163.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcchhhhh---hcc---------CCCCceEEEEccCCCcC---
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTL---FGK---------QDEETLQVCKGDTRNPK---  142 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~---~~~---------~~~~~~~~v~~D~~d~~---  142 (333)
                      .++|+||||+||+|+++++.|++++    ++|+++.|+.......   ...         ....+++++.+|++++.   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    8999999975433221   100         00247899999998763   


Q ss_pred             ---CCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--------
Q 019935          143 ---DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--------  210 (333)
Q Consensus       143 ---~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--------  210 (333)
                         .+. ++..++|+|||||+.....    .....+...|+.|+.+++++++. ++++|+|+||.++++...        
T Consensus      1051 ~~~~~~-~l~~~~d~iiH~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443      1051 SDEKWS-DLTNEVDVIIHNGALVHWV----YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred             CHHHHH-HHHhcCCEEEECCcEecCc----cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence               233 4556899999999976421    12233446799999999997754 788999999998875210        


Q ss_pred             -----CCc------cc---hhhhHHHHHHHHHHHHHHh---cCCCEEEEEcccccCCCCCC--cchHHHHHHhh-cccce
Q 019935          211 -----LPW------SI---MNLFGVLKYKKMGEDFVQK---SGLPFTIIRAGRLTDGPYTS--YDLNTLLKATA-GERRA  270 (333)
Q Consensus       211 -----~~~------~~---~~~~~~~k~k~~~e~~l~~---~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~-~~~~~  270 (333)
                           ...      ..   ....+|..+|+.+|.++..   .|++++++|||.+ +|+...  ++...++..+. +....
T Consensus      1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v-~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443      1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYV-TGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred             hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCcc-ccCCCcCCCCchhHHHHHHHHHHHh
Confidence                 001      00   0112455777778877654   4899999999965 677532  22223332222 22233


Q ss_pred             eecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          271 VLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       271 ~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..+++....++|++++|+|++++.++..+.  ..+.+||+.++       ...+|.++++.+.+
T Consensus      1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~l~~ 1261 (1389)
T TIGR03443      1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-------PRIRFNDFLGTLKT 1261 (1389)
T ss_pred             CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-------CCCcHHHHHHHHHH
Confidence            344555667899999999999999987653  23468999884       66889999988753

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=8.7e-21  Score=168.61  Aligned_cols=219  Identities=15%  Similarity=0.116  Sum_probs=145.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhh------
Q 019935           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        80 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      +.+|++|||||+  ++||+++++.|+++|++|++.+|+.+   ..+.+.... ... .++.+|++|+++++ ++      
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~-~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL-GSD-YVYELDVSKPEHFK-SLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc-CCc-eEEEecCCCHHHHH-HHHHHHHH
Confidence            357899999997  89999999999999999999999852   233332222 223 57899999998877 43      


Q ss_pred             -hcCCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchh
Q 019935          149 -FEGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                       +.++|++|||||....       .+...+.....+++|+.+.+++++++ ..  .-++||++||.+...    +.....
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----~~~~~~  155 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----YVPHYN  155 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----CCCcch
Confidence             3478999999997531       01112233457899999999999865 21  126899999987643    233344


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|+     .+.+...+...|+++++|.||.+ ..+.... ...+.....      ......+...+..++|+|+++
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v-~T~~~~~-~~~~~~~~~------~~~~~~pl~r~~~pedva~~v  227 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPI-KTLAASG-IGDFRMILK------WNEINAPLKKNVSIEEVGNSG  227 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc-ccHHHhc-cchhhHHhh------hhhhhCchhccCCHHHHHHHH
Confidence            5666664     34455566778999999999955 4432110 000000000      000011234578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++.+..  ..|+.+.+++|..
T Consensus       228 ~fL~s~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        228 MYLLSDLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HHHhhhhhhcccccEEEEcCccc
Confidence            99998643  4588999988753

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.4e-20  Score=165.13  Aligned_cols=216  Identities=15%  Similarity=0.128  Sum_probs=144.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ +++       .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   81 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVE-ATFAQIAEDFG   81 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            46789999999999999999999999999999999876654432221  1456788999999988776 333       3


Q ss_pred             CCcEEEEcCCCCCCCC------------CCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEeccccccCCCCC
Q 019935          151 GVTHVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~------------~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~~~~~~  212 (333)
                      ++|+||||||......            ..++.....+++|+.+..++++++     +. ..++||++||.+.++..   
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---  158 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---  158 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC---
Confidence            5899999999643110            011122235678999998877643     12 23579999998766532   


Q ss_pred             ccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          213 WSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       213 ~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                        ....|+.+|..     +.+...+...|++++.++||.+ .++......+.+.....         .......+.+++|
T Consensus       159 --~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~  226 (253)
T PRK08217        159 --GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVI-ETEMTAAMKPEALERLE---------KMIPVGRLGEPEE  226 (253)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCC-cCccccccCHHHHHHHH---------hcCCcCCCcCHHH
Confidence              33456655432     2223334557999999999965 55543221222211111         1123345778999


Q ss_pred             HHHHHHHhccCcccCCcEEEecCC
Q 019935          288 VAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      +|+++..++......|++|++++|
T Consensus       227 ~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        227 IAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHHHHHcCCCcCCcEEEeCCC
Confidence            999999999875567999999986

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7e-21  Score=168.28  Aligned_cols=204  Identities=18%  Similarity=0.191  Sum_probs=138.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+.+....  ...++.++.+|++|+++++ .+++       ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACE-RLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHcCCC
Confidence            368999999999999999999999999999999876654432211  1456888999999998877 5543       68


Q ss_pred             cEEEEcCCCCCCCCC----CCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||+|.......    ..+.....+++|+.++.++++++    +.+.++||++||..++.    +..+...|+.+|.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~  155 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT----GVPTRSGYAASKH  155 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC----CCCCccHHHHHHH
Confidence            999999997542211    11112335788999999999866    23457999999988765    3444556776553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      -     +.....+.+.|+++++++||.+ .++......       ...... ....+....++++++|+|++++.+++..
T Consensus       156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v-~t~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        156 ALHGFFDSLRIELADDGVAVTVVCPGFV-ATDIRKRAL-------DGDGKP-LGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEecCcc-ccCcchhhc-------cccccc-cccccccccCCCCHHHHHHHHHHHhhCC
Confidence            2     1112233456999999999966 333211100       000010 1111122347899999999999999863

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=3.5e-21  Score=170.09  Aligned_cols=216  Identities=16%  Similarity=0.169  Sum_probs=143.4

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++|++|||||  +++||+++++.|+++|++|++..|+..   ..+++...  ......+++|++|+++++ +++     
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~-~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAE--LDSELVFRCDVASDDEIN-QVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhc--cCCceEEECCCCCHHHHH-HHHHHHHH
Confidence            56789999997  679999999999999999999877532   22233221  123467899999999887 443     


Q ss_pred             --cCCcEEEEcCCCCCCC---C-----CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccc
Q 019935          150 --EGVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~---~-----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                        .++|++|||||.....   .     ...+.....+++|+.+...+++++    +...++||++||.+...    +.+.
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----~~~~  156 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----AIPN  156 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc----CCCC
Confidence              4799999999986421   0     011122334678899988888754    22236899999987754    2333


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|+     .+.+...+..+|++++.|.||.+ ..+.....  ........         ....+...+..++|+
T Consensus       157 ~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v-~T~~~~~~~~~~~~~~~~---------~~~~p~~r~~~peev  226 (261)
T PRK08690        157 YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPI-KTLAASGIADFGKLLGHV---------AAHNPLRRNVTIEEV  226 (261)
T ss_pred             cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc-cchhhhcCCchHHHHHHH---------hhcCCCCCCCCHHHH
Confidence            445665554     34445566778999999999955 54432110  01111100         111234468899999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+++++++.+..  ..|+.+.+++|.
T Consensus       227 A~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        227 GNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHhCcccCCcceeEEEEcCCc
Confidence            999999998654  458899998863

>PRK09242 tropinone reductase; Provisional

Probab=99.86  E-value=5.8e-21  Score=168.27  Aligned_cols=219  Identities=15%  Similarity=0.089  Sum_probs=150.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhh-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+.+..+.+....    .+.++.++.+|++++++++ ++     
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~   83 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRR-AILDWVE   83 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHH-HHHHHHH
Confidence            3456789999999999999999999999999999999887655443221    1346888999999988776 33     


Q ss_pred             --hcCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          149 --FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                        +.++|+||||||.....   ....++....+++|+.+..++++++     +.+.++||++||...+.    +......
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~  159 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT----HVRSGAP  159 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC----CCCCCcc
Confidence              34789999999974321   1122333446788999999998865     23557999999998765    3344455


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|..     +.+...+...|++++.++||.+ .++......  ..+.....         .......+..++|++.+
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~  229 (257)
T PRK09242        160 YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYI-RTPLTSGPLSDPDYYEQVI---------ERTPMRRVGEPEEVAAA  229 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCC-CCcccccccCChHHHHHHH---------hcCCCCCCcCHHHHHHH
Confidence            6655532     2223344567999999999954 665432111  11111111         11123356788999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +.+++.+..  ..|+.+.+++|
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            999997643  34888888875

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.3e-20  Score=164.77  Aligned_cols=218  Identities=18%  Similarity=0.126  Sum_probs=146.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +++++++|||||+|+||+++++.|+++|++|+++ .|+.++...+....  ...++.++.+|++|++++. ++++     
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   80 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVE-NLVEQIVEK   80 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHH
Confidence            3567899999999999999999999999999998 88876654432211  1346888999999999887 5443     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+|||++|......   ...+..+..+++|+.+..++++++.     .+.++||++||...+..    ......|+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~----~~~~~~y~  156 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG----ASCEVLYS  156 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC----CCCccHHH
Confidence              7999999999763211   1112234467789999888888652     35678999999876542    22233466


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +.+...+...|+++++++||.+ .++......+........         ......+.+++|+|++++++
T Consensus       157 ~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~va~~~~~l  226 (247)
T PRK05565        157 ASKGAVNAFTKALAKELAPSGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAE---------EIPLGRLGKPEEIAKVVLFL  226 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCc-cCccccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHH
Confidence            55431     2222334557999999999965 444322111111111100         11223467899999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +....  ..|+.+++++|
T Consensus       227 ~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        227 ASDDASYITGQIITVDGG  244 (247)
T ss_pred             cCCccCCccCcEEEecCC
Confidence            97744  45889999885

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.86  E-value=3.8e-21  Score=170.31  Aligned_cols=221  Identities=15%  Similarity=0.085  Sum_probs=146.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+..+..       ..++.++.+|++|+++++ +++       ..
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~   77 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVN-HTVAEIIEKFGR   77 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            456789999999999999999999999999999999875432       346788999999998887 443       46


Q ss_pred             CcEEEEcCCCCCCCC------------CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCcc
Q 019935          152 VTHVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~------------~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                      +|+||||||......            ...+..+..+++|+.++.++++++.     .+.++||++||...+.    +..
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~  153 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE----GSE  153 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC----CCC
Confidence            899999999743110            0111223367889999999998662     2346899999988764    223


Q ss_pred             chhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc--ccce-eecCC--CCccccccc
Q 019935          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG--ERRA-VLMGQ--GDKLIGEVS  284 (333)
Q Consensus       215 ~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~--~~~~~~~i~  284 (333)
                      ....|+.+|..     +.+...+...|+++++|+||.+-..+..............+  .... ..+-.  ..+...+..
T Consensus       154 ~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (266)
T PRK06171        154 GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGK  233 (266)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCC
Confidence            34566665542     33334455679999999999552122211101000000000  0000 00001  123456789


Q ss_pred             HHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          285 RIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++|+|+++.++++...  ..|+++++++|
T Consensus       234 ~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        234 LSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             HHHhhhheeeeeccccccceeeEEEecCc
Confidence            9999999999998654  45889999886

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.2e-21  Score=165.14  Aligned_cols=209  Identities=16%  Similarity=0.200  Sum_probs=143.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-------C
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      +++++|+||||+|+||++++++|+++|++|++++|++++.+.+..... ..+++++.+|++|++++. +.++       +
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQ-RAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            456899999999999999999999999999999999876654432221 256889999999998877 4443       7


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +|+|||++|......   ...+.....+++|+.+..++++++.    .+.++||++||...+.    +......|+.+|+
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~y~~sk~  158 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN----FFAGGAAYNASKF  158 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc----CCCCCchHHHHHH
Confidence            999999998754211   1122233457889999999888652    3567899999987654    3334445665553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .     +.....++..|+++++++||.+. ++.....            .      ......++.++|+++++++++..+
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~-t~~~~~~------------~------~~~~~~~~~~~d~a~~~~~~l~~~  219 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVA-THFNGHT------------P------SEKDAWKIQPEDIAQLVLDLLKMP  219 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeecccc-Ccccccc------------c------chhhhccCCHHHHHHHHHHHHhCC
Confidence            1     22223345579999999999663 3221100            0      000112478999999999999886


Q ss_pred             c-cCCcEEEecCCC
Q 019935          300 F-TEGEIYEINSVE  312 (333)
Q Consensus       300 ~-~~g~~~~v~~g~  312 (333)
                      . .....+.+..+.
T Consensus       220 ~~~~~~~~~~~~~~  233 (237)
T PRK07326        220 PRTLPSKIEVRPSR  233 (237)
T ss_pred             ccccccceEEecCC
Confidence            5 335566666543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=2.6e-20  Score=162.79  Aligned_cols=217  Identities=18%  Similarity=0.147  Sum_probs=142.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +.++++|||||+|+||++++++|+++|++|+++.|+..+ .+......  ...++.++.+|++|++++. ++++      
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   81 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVE-RAVDEAKAEF   81 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHHc
Confidence            456799999999999999999999999999888887543 22221111  1456888999999998877 4443      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+|||++|......   ...+.....+++|+.+..++++++.     .+.++||++||.....    +......|+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~----~~~~~~~y~~  157 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM----GNPGQANYAA  157 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc----CCCCCchhHH
Confidence             6899999999754211   1111223356789999999988662     2567899999975543    1223344655


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +...+.++..++++++++||.+ .++........+.....         .......+++++|+|+++..++
T Consensus       158 sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~l~  227 (248)
T PRK05557        158 SKAGVIGFTKSLARELASRGITVNAVAPGFI-ETDMTDALPEDVKEAIL---------AQIPLGRLGQPEEIASAVAFLA  227 (248)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCcc-CCccccccChHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHc
Confidence            5432     2222334456899999999965 44332211111111111         1112335789999999999988


Q ss_pred             cC--cccCCcEEEecCC
Q 019935          297 DI--EFTEGEIYEINSV  311 (333)
Q Consensus       297 ~~--~~~~g~~~~v~~g  311 (333)
                      ..  ....|+.|++++|
T Consensus       228 ~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        228 SDEAAYITGQTLHVNGG  244 (248)
T ss_pred             CcccCCccccEEEecCC
Confidence            76  3345889999875

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.86  E-value=1.5e-20  Score=165.43  Aligned_cols=220  Identities=10%  Similarity=0.055  Sum_probs=150.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+....  ...++.++.+|++|.++++ +++       
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~-~~~~~~~~~~   86 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELS-ALADFALSKL   86 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            456799999999999999999999999999999999876654432211  1346788899999998876 433       


Q ss_pred             cCCcEEEEcCCCCCCCC--CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      .++|+||||||......  ..++.....+++|+.++.++++++.     .+.++||++||.....    +......|+.+
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~s  162 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASS  162 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC----CCCCcchhHHH
Confidence            46899999999753211  1112223347889999999999762     2446999999987754    33344557766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |..     +.+...+...|+++++|.||.+ ..+..... .+.+.....         .......+.+++|+++++++++
T Consensus       163 K~a~~~~~~~la~~~~~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~a~~~~~l~  232 (255)
T PRK06113        163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAI-LTDALKSVITPEIEQKML---------QHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecccc-cccccccccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHc
Confidence            542     2233444557899999999955 44432211 111111111         1122345789999999999999


Q ss_pred             cCcc--cCCcEEEecCCCC
Q 019935          297 DIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~~  313 (333)
                      ....  ..|+++++++|..
T Consensus       233 ~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CccccCccCCEEEECCCcc
Confidence            8643  4589999999743

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=6.6e-21  Score=166.06  Aligned_cols=198  Identities=17%  Similarity=0.181  Sum_probs=138.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      +.+++++||||+|+||++++++|+++|++|++++|++++.+......  ...++.++.+|++|++++. ++++       
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   83 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVT-AAIEQLKNELG   83 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHH-HHHHHHHHHcC
Confidence            45679999999999999999999999999999999876654432211  1446888999999999887 5543       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||+|......   ..+++.+..+++|+.++.++++++     +.+.+++|++||...+.    +......|+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~s  159 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK----GAAVTSAYSAS  159 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc----CCCCCcchHHH
Confidence            7999999999754211   112223446788999999998866     23568999999987765    33334456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+++.|+++++|+||.+ .++....    .        .   ... .....++.++|+|++++.+++
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v-~t~~~~~----~--------~---~~~-~~~~~~~~~~~~a~~~~~~l~  222 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTV-ATDMAVD----L--------G---LTD-GNPDKVMQPEDLAEFIVAQLK  222 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcc-cCcchhh----c--------c---ccc-cCCCCCCCHHHHHHHHHHHHh
Confidence            532     2333444567999999999966 3332110    0        0   000 112356889999999999998


Q ss_pred             Cc
Q 019935          298 IE  299 (333)
Q Consensus       298 ~~  299 (333)
                      ++
T Consensus       223 ~~  224 (239)
T PRK07666        223 LN  224 (239)
T ss_pred             CC
Confidence            75

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.7e-21  Score=167.54  Aligned_cols=193  Identities=15%  Similarity=0.126  Sum_probs=135.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhc-------CCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFE-------GVT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~-------~~d  153 (333)
                      +++||||||+|+||++++++|+++|++|++++|+.++.++....... .++.++.+|++|++++. ++++       .+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~-~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALA-AAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHH-HHHHHHHHhCCCCC
Confidence            47899999999999999999999999999999998776654432221 26889999999998887 4433       479


Q ss_pred             EEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          154 HVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       154 ~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +||||||......    ..++.....+++|+.|+.++++++    + .+.++||++||...+.    +......|+.+|.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asK~  156 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR----GLPGAGAYSASKA  156 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----CCCCCcchHHHHH
Confidence            9999999754211    112233456789999999988743    2 3567999999987654    2333445665554


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .     +.+..+++..|+++++++||.+ .++....           .        ......+++++|+|+.++.++.+.
T Consensus       157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~-----------~--------~~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        157 AAIKYLESLRVELRPAGVRVVTIAPGYI-RTPMTAH-----------N--------PYPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCCC-cCchhhc-----------C--------CCCCCCccCHHHHHHHHHHHHhCC
Confidence            2     2223344667999999999955 4442110           0        001112478999999999999874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.85  E-value=5.7e-21  Score=168.46  Aligned_cols=216  Identities=14%  Similarity=0.123  Sum_probs=145.8

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc------hhhhhhccCCCCceEEEEccCCCcCCCchhhh-
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE------KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-  149 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-  149 (333)
                      ++++|+++||||+  ++||++++++|+++|++|++..|+.+      ..+++.+.  ...+.++.+|++|+++++ +++ 
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~-~~~~   79 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIE-ETFE   79 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHH-HHHH
Confidence            4567899999986  89999999999999999988876432      12222221  234678899999999887 433 


Q ss_pred             ------cCCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCc
Q 019935          150 ------EGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       150 ------~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~  213 (333)
                            .++|++|||||....       .+.+.+.....+++|+.+.+.+++++..   .-++||++||.....    +.
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~----~~  155 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR----AI  155 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----CC
Confidence                  478999999997531       1112233456789999999999986521   126999999987653    33


Q ss_pred             cchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHH
Q 019935          214 SIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRI  286 (333)
Q Consensus       214 ~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  286 (333)
                      .....|+.+|+     .+.+...+...|+++++|.||.+ ..+.....  .+.....         +....+...+..++
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v-~T~~~~~~~~~~~~~~~---------~~~~~p~~r~~~~~  225 (258)
T PRK07370        156 PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPI-RTLASSAVGGILDMIHH---------VEEKAPLRRTVTQT  225 (258)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcc-cCchhhccccchhhhhh---------hhhcCCcCcCCCHH
Confidence            44456766664     34445555677999999999955 44432110  0011000         01112334688899


Q ss_pred             HHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          287 VVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       287 Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+|++++++++++.  ..|+++.+++|
T Consensus       226 dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        226 EVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHHHhChhhccccCcEEEECCc
Confidence            99999999998654  44888988875

>PRK12743 oxidoreductase; Provisional

Probab=99.85  E-value=1.4e-20  Score=165.73  Aligned_cols=217  Identities=13%  Similarity=0.092  Sum_probs=145.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++||||||+|+||++++++|+++|++|+++.|+ .+..+.+....  .+.++.++.+|++|+++++ +++       .
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGA-QALDKLIQRLG   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHHcC
Confidence            35789999999999999999999999999888654 33333322111  1456889999999988876 433       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .+|+||||+|.....   ...++.....+++|+.+..++++++.     .+ .++||++||.....    +..+...|+.
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~  155 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT----PLPGASAYTA  155 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC----CCCCcchhHH
Confidence            689999999975421   11122334467889999999998652     22 35899999987643    4444556665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.+...+...|++++.|+||.+ +++..............         .......+.+++|+|+++++++
T Consensus       156 sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~  225 (256)
T PRK12743        156 AKHALGGLTKAMALELVEHGILVNAVAPGAI-ATPMNGMDDSDVKPDSR---------PGIPLGRPGDTHEIASLVAWLC  225 (256)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCc-cCccccccChHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHh
Confidence            5532     2233444567899999999954 66643211111110000         0112234678999999999999


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      ....  ..|+++.+++|.
T Consensus       226 ~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        226 SEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             CccccCcCCcEEEECCCc
Confidence            7654  448899998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.85  E-value=1e-20  Score=167.15  Aligned_cols=224  Identities=13%  Similarity=0.073  Sum_probs=145.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      +++++++||||+|+||++++++|+++|++|++++|+.+..+.+.... ..++.++.+|++|.+++. +++       .++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~i   80 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDVRSLDDHK-EAVARCVAAFGKI   80 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEeccCCHHHHH-HHHHHHHHHhCCC
Confidence            46789999999999999999999999999999999887766654322 346788999999988776 433       478


Q ss_pred             cEEEEcCCCCCC--CC--CCC----CCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          153 THVICCTGTTAF--PS--RRW----DGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~--~~--~~~----~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      |+||||||....  +.  ...    +.....+++|+.+++++++++.    ...+++|++||...+.    +......|+
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~  156 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY----PNGGGPLYT  156 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec----CCCCCchhH
Confidence            999999996421  10  011    1234578999999999999762    2225799999887654    223334566


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.-     +.+...+... ++++.|+||.+ ..+........+.......... ...-...+...+.+++|+|+++++
T Consensus       157 ~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~  234 (262)
T TIGR03325       157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGM-SSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHHhhccC-eEEEEEecCCC-cCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheee
Confidence            55532     2222333334 99999999965 5543211000000000000000 000011234567889999999999


Q ss_pred             hccCcc---cCCcEEEecCC
Q 019935          295 ALDIEF---TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~---~~g~~~~v~~g  311 (333)
                      ++.++.   ..|+++.+++|
T Consensus       235 l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             eecCCCcccccceEEEecCC
Confidence            998632   45889999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK12742 oxidoreductase; Provisional

Probab=99.85  E-value=2.2e-20  Score=162.49  Aligned_cols=215  Identities=16%  Similarity=0.175  Sum_probs=144.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTH  154 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~  154 (333)
                      .+++++||||||+|+||++++++|+++|++|+++.| +.+..+.+..   ..+++++.+|++|.+++. +.+   .++|+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~~~~~~~~~D~~~~~~~~-~~~~~~~~id~   78 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---ETGATAVQTDSADRDAVI-DVVRKSGALDI   78 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---HhCCeEEecCCCCHHHHH-HHHHHhCCCcE
Confidence            456789999999999999999999999999988766 4444444322   224677889999988776 444   35899


Q ss_pred             EEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchhhhHHHHHH---
Q 019935          155 VICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK---  225 (333)
Q Consensus       155 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k---  225 (333)
                      ||||||.....   ....++....+++|+.+..++++.+ +.  ..+++|++||.....   .+......|+.+|..   
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~~Y~~sKaa~~~  155 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---MPVAGMAAYAASKSALQG  155 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---CCCCCCcchHHhHHHHHH
Confidence            99999975421   1122334557888999999998744 22  346999999987632   133445567766542   


Q ss_pred             --HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--c
Q 019935          226 --KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--T  301 (333)
Q Consensus       226 --~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~  301 (333)
                        +.+...+...|+++++|+||.+ ..+......+ ......         .......+.+++|+|+++.+++++..  .
T Consensus       156 ~~~~la~~~~~~gi~v~~v~Pg~~-~t~~~~~~~~-~~~~~~---------~~~~~~~~~~p~~~a~~~~~l~s~~~~~~  224 (237)
T PRK12742        156 MARGLARDFGPRGITINVVQPGPI-DTDANPANGP-MKDMMH---------SFMAIKRHGRPEEVAGMVAWLAGPEASFV  224 (237)
T ss_pred             HHHHHHHHHhhhCeEEEEEecCcc-cCCccccccH-HHHHHH---------hcCCCCCCCCHHHHHHHHHHHcCcccCcc
Confidence              2222344557899999999955 5544221111 111110         01123357899999999999998754  4


Q ss_pred             CCcEEEecCC
Q 019935          302 EGEIYEINSV  311 (333)
Q Consensus       302 ~g~~~~v~~g  311 (333)
                      .|+.+.+++|
T Consensus       225 ~G~~~~~dgg  234 (237)
T PRK12742        225 TGAMHTIDGA  234 (237)
T ss_pred             cCCEEEeCCC
Confidence            5889999876

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.7e-21  Score=166.23  Aligned_cols=199  Identities=16%  Similarity=0.118  Sum_probs=138.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------cC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++|+++||||+|+||++++++|+++|++|++++|++++.+.+.....  ..++.++.+|++|++++. .++       .+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIA-PGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            46799999999999999999999999999999999876554432211  356888999999998876 443       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||+|......   ...+.....+++|+.++.++++++     +.+.++||++||...+.    +......|+.+|
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK  159 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN----AFPQWGAYCVSK  159 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc----CCCCccHHHHHH
Confidence            899999999754211   111223445778999998888754     23567999999998876    334445666555


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      ..     +.+...++..|+++++|+||.+ .++....            ... .  .......+++++|+|+++++++.+
T Consensus       160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i-~t~~~~~------------~~~-~--~~~~~~~~~~~~~va~~~~~l~~~  223 (241)
T PRK07454        160 AALAAFTKCLAEEERSHGIRVCTITLGAV-NTPLWDT------------ETV-Q--ADFDRSAMLSPEQVAQTILHLAQL  223 (241)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCcc-cCCcccc------------ccc-c--cccccccCCCHHHHHHHHHHHHcC
Confidence            32     2233344567999999999965 4443110            000 0  001112468999999999999998


Q ss_pred             cc
Q 019935          299 EF  300 (333)
Q Consensus       299 ~~  300 (333)
                      +.
T Consensus       224 ~~  225 (241)
T PRK07454        224 PP  225 (241)
T ss_pred             Cc
Confidence            64

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.2e-21  Score=173.11  Aligned_cols=211  Identities=16%  Similarity=0.114  Sum_probs=142.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+.+++|+||||+|+||++++++|+++|++|++++|++++.+.+.....  +.++.++.+|++|+++++ +++       
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~-~~~~~~~~~~   83 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQ-AAADRAEEEL   83 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHH-HHHHHHHHHC
Confidence            4566899999999999999999999999999999999876655433221  456888999999999887 443       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|++|||||......   ...+.....+++|+.+..++++++    + .+.++||++||...+.    +......|+.
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~----~~~~~~~Y~a  159 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR----SIPLQSAYCA  159 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc----CCCcchHHHH
Confidence            47999999999753211   122233446788888887766644    2 3567999999998876    3444556776


Q ss_pred             HHHH-----HHHHHHHHh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+..++..  .++++++|+||.+ .++...    .. .....       ........+.+++|+|+++++
T Consensus       160 sK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v-~T~~~~----~~-~~~~~-------~~~~~~~~~~~pe~vA~~i~~  226 (334)
T PRK07109        160 AKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAV-NTPQFD----WA-RSRLP-------VEPQPVPPIYQPEVVADAILY  226 (334)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCc-cCchhh----hh-hhhcc-------ccccCCCCCCCHHHHHHHHHH
Confidence            6542     222233332  4799999999955 444211    00 00000       011123356789999999999


Q ss_pred             hccCcccCCcEEEecC
Q 019935          295 ALDIEFTEGEIYEINS  310 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~  310 (333)
                      +++++   .+.+.+++
T Consensus       227 ~~~~~---~~~~~vg~  239 (334)
T PRK07109        227 AAEHP---RRELWVGG  239 (334)
T ss_pred             HHhCC---CcEEEeCc
Confidence            99876   34555654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.85  E-value=6.6e-21  Score=168.26  Aligned_cols=219  Identities=13%  Similarity=0.096  Sum_probs=141.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      .++++|++|||||+++||+++++.|+++|++|+++.| +.+..+......   .+.++.++.+|++|+++++ +++    
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~   82 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYK-ELFKKID   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHH
Confidence            3467789999999999999999999999999988865 444433322111   1346889999999998887 443    


Q ss_pred             ---cCCcEEEEcCCCCCCC---------CCCCCCCCCCcchhHHHHHHHHHhc----CC-CCCeEEEEeccccccCCCCC
Q 019935          150 ---EGVTHVICCTGTTAFP---------SRRWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~~~~~v~~SS~~~~~~~~~~  212 (333)
                         .++|+||||||.....         ....+.....+++|+.+.+.+++++    +. +.++||++||.....    +
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~  158 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV----Y  158 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----C
Confidence               4689999999864210         0011122335667887777766643    22 456999999987543    2


Q ss_pred             ccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccH
Q 019935          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSR  285 (333)
Q Consensus       213 ~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  285 (333)
                      .+....|+.+|.     .+.+...+...|+++++|+||.+ ..+.....  ........         ....+...+.++
T Consensus       159 ~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i-~T~~~~~~~~~~~~~~~~---------~~~~~~~r~~~p  228 (260)
T PRK08416        159 IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPI-DTDALKAFTNYEEVKAKT---------EELSPLNRMGQP  228 (260)
T ss_pred             CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcc-cChhhhhccCCHHHHHHH---------HhcCCCCCCCCH
Confidence            223334555543     23444555667999999999955 44421100  01110000         011123457899


Q ss_pred             HHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          286 IVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       286 ~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +|+|+++++++....  ..|+.+.+++|
T Consensus       229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        229 EDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            999999999998643  45888888875

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8.1e-21  Score=168.07  Aligned_cols=223  Identities=15%  Similarity=0.099  Sum_probs=147.5

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++++++++|||||+|+||++++++|+++|++|++++|++++.+......  ...++.++.+|++|+++++ +++     
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~-~~~~~~~~   82 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVE-AAFAQIAD   82 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHH-HHHHHHHH
Confidence            45677899999999999999999999999999999999876654432111  1345788899999988887 443     


Q ss_pred             --cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 --EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        .++|+||||||.....   ....+.....+++|+.++.++++++.    ...++||++||...+.    +......|+
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~----~~~~~~~Y~  158 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV----PMPMQAHVC  158 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc----CCCCccHHH
Confidence              3689999999854311   11122223456799999999998662    2236999999987653    333445566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.     .+.+...+...|+++++|+||.+...+...    .+    ...... ..+........++.++|+|+++++
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  230 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA----RL----APSPELQAAVAQSVPLKRNGTKQDIANAALF  230 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh----hc----ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            5543     233333445578999999999652111110    00    000000 000111223467889999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++..+.  ..|+.+.+.+|.
T Consensus       231 l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        231 LASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HcChhhcCccCCEEEECCCc
Confidence            998643  458888998874

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-20  Score=169.55  Aligned_cols=199  Identities=16%  Similarity=0.185  Sum_probs=138.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ..+.+++|+||||+|+||++++++|+++|++|++++|+.++.+++.+...  ...+.++.+|++|++++. ++++     
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~-~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVD-ALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            34567899999999999999999999999999999999876655433221  345778999999998877 5544     


Q ss_pred             --CCcEEEEcCCCCCCCCC-----CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          151 --GVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                        ++|+||||||.......     .++.....+++|+.|..++++++     +.+.++||++||.+++..   +.+....
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---~~p~~~~  191 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE---ASPLFSV  191 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC---CCCCcch
Confidence              78999999997642110     11222346788999999988855     336689999999876532   1223345


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|..     +.+..++++.|+++++++|| ++.++....           ..   . ..   ....++++++|+.++
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg-~v~T~~~~~-----------~~---~-~~---~~~~~~pe~vA~~~~  252 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYP-LVATPMIAP-----------TK---A-YD---GLPALTADEAAEWMV  252 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcC-cccCccccc-----------cc---c-cc---CCCCCCHHHHHHHHH
Confidence            6655542     23334455679999999999 444443210           00   0 00   113478999999999


Q ss_pred             HhccCc
Q 019935          294 QALDIE  299 (333)
Q Consensus       294 ~~l~~~  299 (333)
                      .++++.
T Consensus       253 ~~~~~~  258 (293)
T PRK05866        253 TAARTR  258 (293)
T ss_pred             HHHhcC
Confidence            999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.4e-20  Score=165.93  Aligned_cols=220  Identities=14%  Similarity=0.102  Sum_probs=145.1

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc---chhhhhhccCCCCceEEEEccCCCcCCCchhh-----
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      ++++|+++||||+  ++||++++++|+++|++|++++|+.   +..+++.......++.++.+|++|+++++ ++     
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEIT-ACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHH-HHHHHHH
Confidence            4567899999997  8999999999999999999988753   33344433332456788999999998877 43     


Q ss_pred             --hcCCcEEEEcCCCCCCC-------CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          149 --FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        +.++|++|||||.....       +...+.....+++|+.+..++++++..   ...+||++||.....    +....
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~  158 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----VVQNY  158 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----CCCCC
Confidence              34689999999975310       011112233567899998888875521   236899999987643    23333


Q ss_pred             hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|+     .+.+...+...|++++.|+||.+ .++.... ...+.....      ......+...+..++|+|++
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v-~T~~~~~-~~~~~~~~~------~~~~~~p~~r~~~p~~va~~  230 (257)
T PRK08594        159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPI-RTLSAKG-VGGFNSILK------EIEERAPLRRTTTQEEVGDT  230 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcc-cCHhHhh-hccccHHHH------HHhhcCCccccCCHHHHHHH
Confidence            45666654     34445566678999999999954 4432110 000000000      00111223457889999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++....  ..|+.+.+++|
T Consensus       231 ~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        231 AAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHcCcccccccceEEEECCc
Confidence            999998644  45888988875

>PRK08324 short chain dehydrogenase; Validated

Probab=99.85  E-value=1.1e-20  Score=187.69  Aligned_cols=228  Identities=18%  Similarity=0.171  Sum_probs=152.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh-------c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      .+.+++||||||+|+||+++++.|+++|++|++++|+.++.+....... ..++.++.+|++|+++++ +++       .
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~-~~~~~~~~~~g  497 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQ-AAFEEAALAFG  497 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHH-HHHHHHHHHcC
Confidence            3467899999999999999999999999999999999877655433221 137889999999998877 444       3


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCC-CeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+..++++++    + ++. ++||++||..++.    +......|+.
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~----~~~~~~~Y~a  573 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN----PGPNFGAYGA  573 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC----CCCCcHHHHH
Confidence            7899999999754211   111223346788999999998755    2 243 7999999987754    3334456776


Q ss_pred             HHHH--HHHH---HHHHhcCCCEEEEEcccccCCCC-CCcchHHHHHHhhcccce----eecCCCCcccccccHHHHHHH
Q 019935          222 LKYK--KMGE---DFVQKSGLPFTIIRAGRLTDGPY-TSYDLNTLLKATAGERRA----VLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       222 ~k~k--~~~e---~~l~~~gi~~~~vrpg~~~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +|..  ..++   ..+...|+++++|+|+.++.+.. ....+.. ......+...    ..+..+...+.+++++|+|++
T Consensus       574 sKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a  652 (681)
T PRK08324        574 AKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE-ARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEA  652 (681)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh-hhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHH
Confidence            5542  1111   22234579999999997641322 1111100 0000000000    123445667789999999999


Q ss_pred             HHHhcc--CcccCCcEEEecCCC
Q 019935          292 CIQALD--IEFTEGEIYEINSVE  312 (333)
Q Consensus       292 ~~~~l~--~~~~~g~~~~v~~g~  312 (333)
                      +++++.  .....|+++++++|.
T Consensus       653 ~~~l~s~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        653 VVFLASGLLSKTTGAIITVDGGN  675 (681)
T ss_pred             HHHHhCccccCCcCCEEEECCCc
Confidence            999985  334558999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.85  E-value=1e-20  Score=166.32  Aligned_cols=216  Identities=10%  Similarity=-0.020  Sum_probs=145.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|+++||||+|+||++++++|+++|++|++++|+...  .+.+...  ..++.++++|++|.++++ +++       
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   83 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTAL--GRRFLSLTADLRKIDGIP-ALLERAVAEF   83 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhc--CCeEEEEECCCCCHHHHH-HHHHHHHHHh
Confidence            4667899999999999999999999999999988775422  1222211  346788999999988887 444       


Q ss_pred             cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|++|||||.....   +...+.....+++|+.+..++++++.     ++ .+++|++||..++..    ......|+
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~  159 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG----GIRVPSYT  159 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC----CCCCcchH
Confidence            3689999999975421   11223344578899999999998651     22 368999999987652    22334566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|.     .+.+...+.+.|++++.|+||.+ ..+......  ........         ..-+...|..++|+|++++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~p~eva~~~~  229 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYM-ATNNTQQLRADEQRSAEIL---------DRIPAGRWGLPSDLMGPVV  229 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcc-cCcchhhhccchHHHHHHH---------hcCCCCCCcCHHHHHHHHH
Confidence            5553     23333445567999999999965 554322100  00000000         1112346889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.+..  ..|+.+.+++|
T Consensus       230 ~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        230 FLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHhCccccCccCcEEEECCC
Confidence            9998754  44888888775

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.1e-20  Score=166.61  Aligned_cols=217  Identities=15%  Similarity=0.091  Sum_probs=146.2

Q ss_pred             CCCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh---hhhhccCCCCceEEEEccCCCcCCCchhh----
Q 019935           78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQVCKGDTRNPKDLDPAI----  148 (333)
Q Consensus        78 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~~~~~~~~v~~D~~d~~~~~~~~----  148 (333)
                      .++++|++|||||+  ++||++++++|+++|++|++.+|+.+..   +++...  .....++.+|++|+++++ ++    
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~-~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLE-AVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHH-HHHHHH
Confidence            34567999999998  5999999999999999999999985432   233222  123567899999998887 43    


Q ss_pred             ---hcCCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccc
Q 019935          149 ---FEGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       149 ---~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                         +.++|++|||||....       .+...+.....+++|+.+.+++++++ ..  .-++||++||.+...    +...
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~----~~~~  158 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK----VVEN  158 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc----CCcc
Confidence               3478999999997531       01122233457889999999999865 21  125899999987643    3334


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|+     .+.+...+...|++++.|+||.+ ..+.....  ........         ....+...+..++|+
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v-~T~~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dv  228 (258)
T PRK07533        159 YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPL-KTRAASGIDDFDALLEDA---------AERAPLRRLVDIDDV  228 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCc-CChhhhccCCcHHHHHHH---------HhcCCcCCCCCHHHH
Confidence            455666664     24445566678999999999955 44431100  01111110         011223457889999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+++++++.++.  ..|+.+.+++|
T Consensus       229 a~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        229 GAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHhChhhccccCcEEeeCCc
Confidence            999999998643  55889988875

>PRK06194 hypothetical protein; Provisional

Probab=99.85  E-value=7.7e-21  Score=170.20  Aligned_cols=164  Identities=13%  Similarity=0.071  Sum_probs=114.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++.++++|||||+||||++++++|+++|++|++++|+.+..+.......  +.++.++.+|++|.++++ ++++      
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~~~~~   81 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVE-ALADAALERF   81 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            3456899999999999999999999999999999998765544332211  346788999999998887 5554      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCC------CeEEEEeccccccCCCCCccc
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSL------KRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~------~~~v~~SS~~~~~~~~~~~~~  215 (333)
                       ++|+||||||......   ...+.....+++|+.|+.++++++     +.+.      ++||++||.+++.    +...
T Consensus        82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~  157 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL----APPA  157 (287)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----CCCC
Confidence             5899999999864211   112223345789999999977753     1222      5899999998875    3334


Q ss_pred             hhhhHHHHHH-----HHHHHHHH--hcCCCEEEEEcccc
Q 019935          216 MNLFGVLKYK-----KMGEDFVQ--KSGLPFTIIRAGRL  247 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~--~~gi~~~~vrpg~~  247 (333)
                      ...|+.+|..     +.+...+.  ..+++++++.||.+
T Consensus       158 ~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i  196 (287)
T PRK06194        158 MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFV  196 (287)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcc
Confidence            4567766642     11112222  23688999999854

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.5e-20  Score=165.61  Aligned_cols=216  Identities=19%  Similarity=0.181  Sum_probs=143.5

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhh------
Q 019935           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        79 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      ++.+|+++||||  +++||.+++++|+++|++|++++|+.  +..+.+.... ...+.++.+|++|+++++ ++      
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~-~~~~~~~~   81 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-PEPAPVLELDVTNEEHLA-SLADRVRE   81 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-CCCCcEEeCCCCCHHHHH-HHHHHHHH
Confidence            356789999999  89999999999999999999998764  3334433322 235778999999998877 43      


Q ss_pred             -hcCCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhcC-C--CCCeEEEEeccccccCCCCCccchh
Q 019935          149 -FEGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALP-S--SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                       +.++|++|||||....       .+.++++....+++|+.+.+++++++. .  ..++||++|+.+..     +.+...
T Consensus        82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-----~~~~~~  156 (256)
T PRK07889         82 HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-----AWPAYD  156 (256)
T ss_pred             HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-----cCCccc
Confidence             3479999999997531       111233334457899999999888652 1  22589998865432     122233


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCccc-ccccHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVA  289 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva  289 (333)
                      .|+.+|+     .+.+..++...|++++.|.||.+ ..+.....  ........         ....+.. .+..++|+|
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v-~T~~~~~~~~~~~~~~~~---------~~~~p~~~~~~~p~evA  226 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPI-RTLAAKAIPGFELLEEGW---------DERAPLGWDVKDPTPVA  226 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcc-cChhhhcccCcHHHHHHH---------HhcCccccccCCHHHHH
Confidence            4555553     35555667778999999999955 44432100  00110000         0011122 478899999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++.+..  ..|+++.+++|
T Consensus       227 ~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        227 RAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHhCcccccccceEEEEcCc
Confidence            99999998753  45888888875

>PRK06196 oxidoreductase; Provisional

Probab=99.85  E-value=6.3e-20  Score=166.55  Aligned_cols=212  Identities=18%  Similarity=0.173  Sum_probs=138.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.++.+......  .++.++.+|++|.++++ +++       .+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l--~~v~~~~~Dl~d~~~v~-~~~~~~~~~~~~   99 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI--DGVEVVMLDLADLESVR-AFAERFLDSGRR   99 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hhCeEEEccCCCHHHHH-HHHHHHHhcCCC
Confidence            346789999999999999999999999999999999987766544322  24788999999998887 443       47


Q ss_pred             CcEEEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCC--------CCCccchh
Q 019935          152 VTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFN--------ELPWSIMN  217 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~--------~~~~~~~~  217 (333)
                      +|+||||||....+. ...+..+..+++|+.+..++++++    + .+.++||++||.+.....        ..++.+..
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~  179 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL  179 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence            899999999754221 112233446789999988877744    2 345799999998653211        12333445


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCC-CCcc-cccccHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ-GDKL-IGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~i~v~Dva~  290 (333)
                      .|+.+|..     +.+...+.+.|+++++|+||.+ .++........ .....  .   .... .... ..+.+++|+|.
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v-~t~~~~~~~~~-~~~~~--~---~~~~~~~~~~~~~~~~~~~a~  252 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGI-LTPLQRHLPRE-EQVAL--G---WVDEHGNPIDPGFKTPAQGAA  252 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcc-cCCccccCChh-hhhhh--h---hhhhhhhhhhhhcCCHhHHHH
Confidence            67666542     2223334456999999999955 56643211000 00000  0   0000 0011 13568899999


Q ss_pred             HHHHhccCcc
Q 019935          291 ACIQALDIEF  300 (333)
Q Consensus       291 a~~~~l~~~~  300 (333)
                      .+++++..+.
T Consensus       253 ~~~~l~~~~~  262 (315)
T PRK06196        253 TQVWAATSPQ  262 (315)
T ss_pred             HHHHHhcCCc
Confidence            9999997654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=166.83  Aligned_cols=219  Identities=11%  Similarity=0.012  Sum_probs=149.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++.+|+++||||+|+||++++++|+++|++|++++|+.++.+.......  +.++.++.+|++|+++++ +++       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~   85 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQ-AMVSQIEKEV   85 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHhC
Confidence            4567899999999999999999999999999999998876554432221  346888999999999887 544       


Q ss_pred             cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||.....   ....+.....+++|+.+...+++++    + .+.++||++||.....    +......|+.
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  161 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL----GRETVSAYAA  161 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC----CCCCCccHHH
Confidence            3589999999986421   1222333445678999999888865    2 2567999999976533    2223345665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--------HHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--------NTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      +|.     .+.+...+...|++++.|+||.+ .++......        ..+.....         .......+..++|+
T Consensus       162 sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dv  231 (265)
T PRK07097        162 AKGGLKMLTKNIASEYGEANIQCNGIGPGYI-ATPQTAPLRELQADGSRHPFDQFII---------AKTPAARWGDPEDL  231 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCceEEEEEeccc-cccchhhhhhccccccchhHHHHHH---------hcCCccCCcCHHHH
Confidence            553     23334445567999999999955 554321100        00000000         11123357889999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+.+++++.+..  ..|+.+.+.+|.
T Consensus       232 a~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        232 AGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHhCcccCCCCCCEEEECCCc
Confidence            999999998743  558888888863

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-20  Score=166.96  Aligned_cols=216  Identities=13%  Similarity=0.076  Sum_probs=146.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      .+++++|||||+|+||++++++|+++|++|++++|++++.+.+.....  ..++.++.+|+++++++. +++       .
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   86 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATA-GLAGQAVEAFG   86 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHcC
Confidence            467899999999999999999999999999999999876554432221  346888999999999887 443       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC------CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||.....   ....+.....+++|+.++.++++++.      .+.++||++||.....    +......|+.
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~~  162 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----AGRGFAAYGT  162 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC----CCCCCchhHH
Confidence            789999999864321   11123344567889999999999762      3457899999987654    3344556776


Q ss_pred             HHHHHHHHHHHH----h--cCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          222 LKYKKMGEDFVQ----K--SGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       222 ~k~k~~~e~~l~----~--~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +|+  .++.+.+    +  .+++++.|+||.+ .++.....  ...+.....         .......+..++|+|++++
T Consensus       163 sK~--a~~~~~~~~~~e~~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~  230 (263)
T PRK07814        163 AKA--ALAHYTRLAALDLCPRIRVNAIAPGSI-LTSALEVVAANDELRAPME---------KATPLRRLGDPEDIAAAAV  230 (263)
T ss_pred             HHH--HHHHHHHHHHHHHCCCceEEEEEeCCC-cCchhhhccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHHH
Confidence            654  3332222    1  2589999999965 33321110  011111111         0112234678999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++.+..  ..|+.+.+.+|.
T Consensus       231 ~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        231 YLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            9997642  458888988764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.2e-20  Score=166.49  Aligned_cols=215  Identities=16%  Similarity=0.142  Sum_probs=143.5

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++|+++||||++  +||+++++.|+++|++|++.+|+..   ..+++....  ....++.+|++|+++++ +++     
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~-~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSIS-NLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHH-HHHHHHHH
Confidence            4578999999997  8999999999999999999888742   122222211  12345789999998887 443     


Q ss_pred             --cCCcEEEEcCCCCCC-------CCCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchh
Q 019935          150 --EGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                        .++|++|||||....       .+...+.....+++|+.+.+.+++++ ..  .-++||++||.+...    +.....
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~  158 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK----VIPNYN  158 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----CCCccc
Confidence              468999999997431       01122233446788999999999865 21  226999999987643    233344


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|+     .+.+..++...|+++++|.||.+ ..+....  ..........         ...+...+..++|+|+
T Consensus       159 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedva~  228 (260)
T PRK06603        159 VMGVAKAALEASVKYLANDMGENNIRVNAISAGPI-KTLASSAIGDFSTMLKSHA---------ATAPLKRNTTQEDVGG  228 (260)
T ss_pred             chhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcC-cchhhhcCCCcHHHHHHHH---------hcCCcCCCCCHHHHHH
Confidence            5666554     34555667778999999999955 4432110  0011111000         1122345788999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++.+.  ..|+.+.+++|
T Consensus       229 ~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        229 AAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHHHhCcccccCcceEEEeCCc
Confidence            9999998644  45888999886

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-20  Score=164.99  Aligned_cols=218  Identities=12%  Similarity=0.141  Sum_probs=144.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +.++++++||||+|+||++++++|+++|++|+++.|+... .+.+....  ...++.++.+|++|+++++ +.++     
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   80 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVT-RLFDAAETA   80 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHH
Confidence            3567899999999999999999999999999888775432 22221111  1456889999999998887 5544     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                        ++|+||||||......   ...+..+..+++|+.+..++++++ +.  ..++||++||.+...    +.+....|+.+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~s  156 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----PLPGYGPYAAS  156 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----CCCCCchhHHH
Confidence              7899999999754211   112223345778999999999866 22  235999999987754    34445567655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCC-CcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYT-SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |..     +.+...+...|+++++++||.+ .++.. ............         .......+.+++|+|+++++++
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~d~a~~~~~l~  226 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPV-ATELFFNGKSAEQIDQLA---------GLAPLERLGTPEEIAAAVAFLA  226 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCc-cCchhcccCCHHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHc
Confidence            542     1122233446899999999955 44431 111111111111         1123345678999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .++.  ..|+.+++++|
T Consensus       227 ~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CccccCccccEEEeCCC
Confidence            8754  34889999875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.85  E-value=1.7e-20  Score=163.12  Aligned_cols=210  Identities=12%  Similarity=0.025  Sum_probs=139.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      ++|++|||||+|+||++++++|+++|++|++++|++++......   ..+++++.+|++|+++++ +++       .++|
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~id   76 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR---QAGAQCIQADFSTNAGIM-AFIDELKQHTDGLR   76 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCEEEEcCCCCHHHHH-HHHHHHHhhCCCcc
Confidence            35789999999999999999999999999999998754332221   234778999999998877 433       4589


Q ss_pred             EEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----CC-C--CCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       154 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~--~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      ++|||||.....   ....+.....+++|+.+.+.+++++    +. +  .++||++||.....    +......|+.+|
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~asK  152 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----GSDKHIAYAASK  152 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc----CCCCCccHHHHH
Confidence            999999974321   1112233456788999998877755    22 2  46899999886543    223344566555


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      ..     +.....+.. ++++++|+||.+..+....   .........         ......+..++|+|+++.++++.
T Consensus       153 aal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~~~va~~~~~l~~~  219 (236)
T PRK06483        153 AALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDD---AAYRQKALA---------KSLLKIEPGEEEIIDLVDYLLTS  219 (236)
T ss_pred             HHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCC---HHHHHHHhc---------cCccccCCCHHHHHHHHHHHhcC
Confidence            32     122222222 5999999999764432211   111111110         11122456789999999999986


Q ss_pred             cccCCcEEEecCC
Q 019935          299 EFTEGEIYEINSV  311 (333)
Q Consensus       299 ~~~~g~~~~v~~g  311 (333)
                      ....|+++.+++|
T Consensus       220 ~~~~G~~i~vdgg  232 (236)
T PRK06483        220 CYVTGRSLPVDGG  232 (236)
T ss_pred             CCcCCcEEEeCcc
Confidence            5567899999886

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=168.56  Aligned_cols=216  Identities=12%  Similarity=0.098  Sum_probs=145.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---------chhhhhhccCC--CCceEEEEccCCCcCCCchh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD--EETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~  147 (333)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.         +..+.....+.  +.++.++.+|++|+++++ +
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~-~   81 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAA-N   81 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHH-H
Confidence            35678999999999999999999999999999998765         33333322111  346778899999988877 3


Q ss_pred             h-------hcCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC----C----C---CCeEEEEeccccc
Q 019935          148 I-------FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----S----S---LKRIVLVSSVGVT  206 (333)
Q Consensus       148 ~-------~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~----~----~---~~~~v~~SS~~~~  206 (333)
                      +       +.++|++|||||.....   +...+.....+++|+.+++++++++.    .    +   .++||++||....
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            3       35789999999975421   11222334568899999999988551    1    1   2589999998765


Q ss_pred             cCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccc
Q 019935          207 KFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIG  281 (333)
Q Consensus       207 ~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (333)
                      .    +......|+.+|.     .+.+...+...|++++.|+|| + ..+...    ..........       ......
T Consensus       162 ~----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~-~T~~~~----~~~~~~~~~~-------~~~~~~  224 (286)
T PRK07791        162 Q----GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-A-RTRMTE----TVFAEMMAKP-------EEGEFD  224 (286)
T ss_pred             c----CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-C-CCCcch----hhHHHHHhcC-------cccccC
Confidence            4    3334456766664     244455666789999999998 5 333211    1111110000       011124


Q ss_pred             cccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          282 EVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +..++|+|+++++++....  ..|+.+.+++|.
T Consensus       225 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        225 AMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             CCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            6789999999999998643  458899998864

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2e-20  Score=161.50  Aligned_cols=204  Identities=19%  Similarity=0.182  Sum_probs=136.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~vi~~  158 (333)
                      +|++|||||+|+||+++++.|+++ ++|++++|+.++.+.+...  ..+++++++|++|+++++ +++.   ++|+|||+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~-~~~~~~~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE--LPGATPFPVDLTDPEAIA-AAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH--hccceEEecCCCCHHHHH-HHHHhcCCCCEEEEC
Confidence            578999999999999999999999 9999999998765544322  236788999999999888 6665   69999999


Q ss_pred             CCCCCCCCC-C--CCCCCCCcchhHHHHHHHHH----hcCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHH
Q 019935          159 TGTTAFPSR-R--WDGDNTPEKVDWEGVRNLVS----ALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       159 a~~~~~~~~-~--~~~~~~~~~~n~~~~~~l~~----a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~  231 (333)
                      +|....... .  .+.....+++|+.+..++.+    +++...+++|++||..++.    +..+...|+.+|.  .++.+
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~----~~~~~~~y~~~K~--a~~~~  152 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLR----ANPGWGSYAASKF--ALRAL  152 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcC----cCCCCchHHHHHH--HHHHH
Confidence            997542110 0  01112246778888555554    3444567999999988765    2333445665543  33322


Q ss_pred             HH---h--cC-CCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcE
Q 019935          232 VQ---K--SG-LPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEI  305 (333)
Q Consensus       232 l~---~--~g-i~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~  305 (333)
                      ++   .  .+ +++++++||.+ .++...    .+..   ..      +.......+++++|+|++++++++++. .+.+
T Consensus       153 ~~~~~~~~~~~i~~~~i~pg~~-~~~~~~----~~~~---~~------~~~~~~~~~~~~~dva~~~~~~l~~~~-~~~~  217 (227)
T PRK08219        153 ADALREEEPGNVRVTSVHPGRT-DTDMQR----GLVA---QE------GGEYDPERYLRPETVAKAVRFAVDAPP-DAHI  217 (227)
T ss_pred             HHHHHHHhcCCceEEEEecCCc-cchHhh----hhhh---hh------ccccCCCCCCCHHHHHHHHHHHHcCCC-CCcc
Confidence            22   1  24 99999999954 332211    1110   00      011122468999999999999998754 3667


Q ss_pred             EEecC
Q 019935          306 YEINS  310 (333)
Q Consensus       306 ~~v~~  310 (333)
                      +++.-
T Consensus       218 ~~~~~  222 (227)
T PRK08219        218 TEVVV  222 (227)
T ss_pred             ceEEE
Confidence            77764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-20  Score=165.27  Aligned_cols=218  Identities=16%  Similarity=0.092  Sum_probs=145.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      +|+++||||+|+||+++++.|+++|++|++++|+.++.+.+.....  ..++.++.+|++|+++++ +++       .++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQ-KMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHHhCCc
Confidence            4789999999999999999999999999999998776554432211  356888999999998887 433       468


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |+||||+|.....   ....+.....+++|+.+.+++++++     +.+ .++||++||...+.    +......|+.+|
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~sK  155 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD----AGPGVIHSAAAK  155 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc----CCCCCcchHHHH
Confidence            9999999864311   1111223446889999999999976     222 36899999987654    222333466555


Q ss_pred             H-----HHHHHHHHH-hcCCCEEEEEcccccCCCCCCc---chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          224 Y-----KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSY---DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       224 ~-----k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .     .+.+...+. ++|++++.|+||.+ .+.....   ..+...+...         .......+..++|+|+++.+
T Consensus       156 aa~~~~~~~la~e~~~~~gi~v~~v~PG~v-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~  225 (252)
T PRK07677        156 AGVLAMTRTLAVEWGRKYGIRVNAIAPGPI-ERTGGADKLWESEEAAKRTI---------QSVPLGRLGTPEEIAGLAYF  225 (252)
T ss_pred             HHHHHHHHHHHHHhCcccCeEEEEEeeccc-ccccccccccCCHHHHHHHh---------ccCCCCCCCCHHHHHHHHHH
Confidence            3     223333333 46999999999955 4321110   0111111111         11123457889999999999


Q ss_pred             hccCcc--cCCcEEEecCCCCC
Q 019935          295 ALDIEF--TEGEIYEINSVEGE  314 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~~~  314 (333)
                      ++....  ..|+.+.+++|...
T Consensus       226 l~~~~~~~~~g~~~~~~gg~~~  247 (252)
T PRK07677        226 LLSDEAAYINGTCITMDGGQWL  247 (252)
T ss_pred             HcCccccccCCCEEEECCCeec
Confidence            987643  55889999887543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.9e-20  Score=164.80  Aligned_cols=217  Identities=13%  Similarity=0.094  Sum_probs=142.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +++++|+||||+|+||++++++|+++|++|++++|+..+.+......   ...++.+|++|+++++ ++++       ++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~-~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---GGLFVPTDVTDEDAVN-ALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCcEEEeeCCCHHHHH-HHHHHHHHHcCCC
Confidence            45789999999999999999999999999999999877655443221   2367899999998887 5553       68


Q ss_pred             cEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEecccc-ccCCCCCccchhhhHH
Q 019935          153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGV-TKFNELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~-~~~~~~~~~~~~~~~~  221 (333)
                      |+||||||......     ...+.....+++|+.+..++++++     +.+.+++|++||... ++.    ......|+.
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~----~~~~~~Y~~  156 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS----ATSQISYTA  156 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC----CCCCcchHH
Confidence            99999998753211     111123346778999998888754     234568999998654 431    122345666


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.+...+...|+++++|+||.+ +++.....+.......  .......    ....+.+++|+|+++..++
T Consensus       157 sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v-~t~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~a~~~~~l~  229 (255)
T PRK06057        157 SKGGVLAMSRELGVQFARQGIRVNALCPGPV-NTPLLQELFAKDPERA--ARRLVHV----PMGRFAEPEEIAAAVAFLA  229 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEeeCCc-CCchhhhhccCCHHHH--HHHHhcC----CCCCCcCHHHHHHHHHHHh
Confidence            5532     2223344556999999999955 5654321110000000  0001111    1235799999999999998


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .+..  ..|+.+.+++|
T Consensus       230 ~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        230 SDDASFITASTFLVDGG  246 (255)
T ss_pred             CccccCccCcEEEECCC
Confidence            7644  34888888875

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.5e-20  Score=165.67  Aligned_cols=218  Identities=14%  Similarity=0.078  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+....  ...+++++.+|++++++++ ++++      
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIK-AAVAHAETEA   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHhc
Confidence            356789999999999999999999999999999999987765543321  1346889999999988887 5443      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC--------CCeEEEEeccccccCCCCCc
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--------LKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~--------~~~~v~~SS~~~~~~~~~~~  213 (333)
                       ++|+||||+|......   ...+.....+++|+.+..++++++.     ..        .+++|++||...+.    +.
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~  160 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR----VL  160 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC----CC
Confidence             6899999999754211   1112233467889999998888551     11        35899999988765    33


Q ss_pred             cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       214 ~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      .....|+.+|..     +.....+...|+++++|+||.+ +++.....+ ........         .......+..++|
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~~  230 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYI-DTEINHHHWETEQGQKLV---------SMLPRKRVGKPED  230 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCC-cCCcchhccChHHHHHHH---------hcCCCCCCcCHHH
Confidence            445567765532     2222333456899999999955 666532111 11101000         0112236788999


Q ss_pred             HHHHHHHhccCcc--cCCcEEEecCC
Q 019935          288 VAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.+++....  ..|+.+.+++|
T Consensus       231 ~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        231 LDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            9999999998644  55888888876

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.84  E-value=2.3e-20  Score=163.25  Aligned_cols=216  Identities=14%  Similarity=0.103  Sum_probs=142.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++|+++||||+|+||++++++|+++|++|+++.+ +........+..  .+..+..+.+|++|.+++. +++       .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTK-AAFDKVKAEVG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHhC
Confidence            4579999999999999999999999999988654 333322221111  1345777899999998877 443       4


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||.....   +..+++.+..+++|+.+..++++++     +.+.++||++||.....    +......|+.+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~y~~s  156 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----GQFGQTNYSTA  156 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----CCCCChhHHHH
Confidence            789999999975421   1122333456788999988877754     23567999999986643    23344556655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+.+.+...|+++++|+||.+ .++......+.+.....         .......+..++|+++++++++.
T Consensus       157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~l~~  226 (246)
T PRK12938        157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYI-GTDMVKAIRPDVLEKIV---------ATIPVRRLGSPDEIGSIVAWLAS  226 (246)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeccc-CCchhhhcChHHHHHHH---------hcCCccCCcCHHHHHHHHHHHcC
Confidence            542     2223344557999999999955 55542211111111111         11233457789999999999997


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ++.  ..|+.+.+.+|
T Consensus       227 ~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        227 EESGFSTGADFSLNGG  242 (246)
T ss_pred             cccCCccCcEEEECCc
Confidence            643  45889998875

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.4e-20  Score=163.56  Aligned_cols=222  Identities=16%  Similarity=0.089  Sum_probs=146.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh---cCCc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF---EGVT  153 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~---~~~d  153 (333)
                      +++++++||||+|+||+++++.|+++|++|++++|+.++.+......   ...++.++.+|++|++++. +++   ..+|
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~-~~~~~~g~id   83 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEARE-QLAAEAGDID   83 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHH-HHHHHhCCCC
Confidence            46789999999999999999999999999999999987665533221   1346788999999998887 544   4699


Q ss_pred             EEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       154 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      ++|||+|.....   ....+.....+++|+.+.+++++++    + .+.+++|++||.....    +......|+.+|. 
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~y~ask~a  159 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN----PDADYICGSAGNAA  159 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC----CCCCchHhHHHHHH
Confidence            999999975311   1112223445788999999999865    2 2346899999887643    2223334444443 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh----cccc-eeecCCCCcccccccHHHHHHHHHHh
Q 019935          225 ----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA----GERR-AVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       225 ----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                          .+.+..++...|++++.|+||.+ .++..    ..+.....    .... ...+-...+...+.+++|+|++++++
T Consensus       160 l~~~~~~la~e~~~~gi~v~~i~PG~v-~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  234 (259)
T PRK06125        160 LMAFTRALGGKSLDDGVRVVGVNPGPV-ATDRM----LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFL  234 (259)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCcc-ccHHH----HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHH
Confidence                23333445567999999999955 44321    11110000    0000 00000111233578999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +.+..  ..|+.+.+++|
T Consensus       235 ~~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        235 ASPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             cCchhccccCceEEecCC
Confidence            98643  45889999886

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-20  Score=167.76  Aligned_cols=209  Identities=16%  Similarity=0.112  Sum_probs=142.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .++.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+..... ...+..+.+|++|+++++ +++       
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   83 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQ-AAAEEAVERF   83 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHH-HHHHHHHHHc
Confidence            35678899999999999999999999999999999999887766544332 334566779999998877 433       


Q ss_pred             cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ..+|+||||||.....   +...+..+..+++|+.++.++++++.    ...++||++||.+.+.    +......|+.+
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  159 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA----AAPGMAAYCAS  159 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC----CCCCchHHHHH
Confidence            4789999999975421   11122234567899999999998652    2346899999998865    33444567665


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.+...+...|+++++++||.+ .++.......  .........       .......+++++|+|++++++
T Consensus       160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v-~T~~~~~~~~~~~~~~~~~~~-------~~~p~~~~~~~~~va~~i~~~  231 (296)
T PRK05872        160 KAGVEAFANALRLEVAHHGVTVGSAYLSWI-DTDLVRDADADLPAFRELRAR-------LPWPLRRTTSVEKCAAAFVDG  231 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHCcEEEEEecCcc-cchhhhhccccchhHHHHHhh-------CCCcccCCCCHHHHHHHHHHH
Confidence            532     2333444567999999999955 5443221000  000000000       011234678999999999999


Q ss_pred             ccCc
Q 019935          296 LDIE  299 (333)
Q Consensus       296 l~~~  299 (333)
                      +.+.
T Consensus       232 ~~~~  235 (296)
T PRK05872        232 IERR  235 (296)
T ss_pred             HhcC
Confidence            9874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=2.4e-20  Score=164.73  Aligned_cols=217  Identities=13%  Similarity=0.126  Sum_probs=142.2

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++|+++||||++  +||+++++.|+++|++|++.+|+..   ..+.+...  ...+.++.+|++|+++++ +++     
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~-~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLPCDVAEDASID-AMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc--cCCceEeecCCCCHHHHH-HHHHHHHh
Confidence            4678999999985  9999999999999999999888732   22223221  234667899999999888 433     


Q ss_pred             --cCCcEEEEcCCCCCCCC--------CCCCCCCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCCCCCccch
Q 019935          150 --EGVTHVICCTGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        .++|++|||||......        ..++.....+++|+.+.+.+.+++.   ..-++||++||.+...    +....
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~----~~~~~  156 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNY  156 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC----CCCCc
Confidence              46899999999753110        0111223456889999888888652   1226899999987643    33334


Q ss_pred             hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|+     .+.+...+...||++++|.||.+ ..+.... ...+......      .....+...+..++|+|++
T Consensus       157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v-~T~~~~~-~~~~~~~~~~------~~~~~p~~r~~~pedva~~  228 (262)
T PRK07984        157 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI-RTLAASG-IKDFRKMLAH------CEAVTPIRRTVTIEDVGNS  228 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcc-cchHHhc-CCchHHHHHH------HHHcCCCcCCCCHHHHHHH
Confidence            45665554     34455556677999999999955 4332110 0000000000      0011123467899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++..  ..|+.+.+++|
T Consensus       229 ~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        229 AAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHcCcccccccCcEEEECCC
Confidence            999998743  45888988876

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-20  Score=162.20  Aligned_cols=193  Identities=13%  Similarity=0.202  Sum_probs=133.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch-hhhhhccC---CCCceEEEEccCCCcCCCchhhh------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK-ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+++|+||||+|+||++++++|+++| ++|++++|++++ .+.+....   ...+++++.+|++|+++++ +.+      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~-~~~~~~~~~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHP-KVIDAAFAG   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHH-HHHHHHHhc
Confidence            45789999999999999999999995 999999998775 44332211   1236889999999988866 333      


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCC---CCcchhHHHHHHHHH----hcC-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDN---TPEKVDWEGVRNLVS----ALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~---~~~~~n~~~~~~l~~----a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|++|||+|........+.+..   +.+++|+.+..++++    +++ .+.++||++||..++.    +......|+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~----~~~~~~~Y~~  161 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER----VRRSNFVYGS  161 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC----CCCCCcchHH
Confidence            379999999998542222222211   247899999887655    333 3678999999987643    2233345666


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|+.     +.++.+++.+|+++++++||.+ ..+...        .   ..         .....++++|+|+.++.++
T Consensus       162 sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v-~t~~~~--------~---~~---------~~~~~~~~~~~A~~i~~~~  220 (253)
T PRK07904        162 TKAGLDGFYLGLGEALREYGVRVLVVRPGQV-RTRMSA--------H---AK---------EAPLTVDKEDVAKLAVTAV  220 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeeCce-ecchhc--------c---CC---------CCCCCCCHHHHHHHHHHHH
Confidence            5542     3445667788999999999966 333211        0   00         0112578999999999999


Q ss_pred             cCc
Q 019935          297 DIE  299 (333)
Q Consensus       297 ~~~  299 (333)
                      .+.
T Consensus       221 ~~~  223 (253)
T PRK07904        221 AKG  223 (253)
T ss_pred             HcC
Confidence            875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.84  E-value=1.2e-20  Score=182.89  Aligned_cols=218  Identities=16%  Similarity=0.124  Sum_probs=152.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ...+|++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.. ..++..+.+|++|+++++ +++       ..
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADITDEAAVE-SAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            346789999999999999999999999999999999987776655433 346677899999998887 443       46


Q ss_pred             CcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          152 VTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +|+||||||....  +  +...+.....+++|+.+++++++++ ..  +.++||++||.+.+.    +......|+.+|.
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  419 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL----ALPPRNAYCASKA  419 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC----CCCCCchhHHHHH
Confidence            8999999997531  1  1112233456889999999999865 22  346999999998865    4445566776664


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      .     +.+...+...|+++++|+||.+ .++......   ........         .......+.+++|+|+++++++
T Consensus       420 al~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dia~~~~~l~  489 (520)
T PRK06484        420 AVTMLSRSLACEWAPAGIRVNTVAPGYI-ETPAVLALKASGRADFDSIR---------RRIPLGRLGDPEEVAEAIAFLA  489 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCc-cCchhhhhccccHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHh
Confidence            2     3334455567999999999955 555321100   00000000         1112235688999999999999


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      ....  ..|+.+.+.+|.
T Consensus       490 s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        490 SPAASYVNGATLTVDGGW  507 (520)
T ss_pred             CccccCccCcEEEECCCc
Confidence            8643  558899998863

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=2.7e-20  Score=165.42  Aligned_cols=218  Identities=14%  Similarity=0.100  Sum_probs=144.6

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc---chhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++|++|||||+  ++||+++++.|+++|++|++..|+.   ++.+.+....  .....+.+|++|+++++ +++     
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~-~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASID-AVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHH-HHHHHHHH
Confidence            456899999997  8999999999999999999888863   2233333222  23557899999998887 433     


Q ss_pred             --cCCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchh
Q 019935          150 --EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                        ..+|++|||||....     +  +...+.....+++|+.+++++++++..   ..+++|++||.+...    +.+...
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----~~p~~~  160 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK----VMPHYN  160 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc----CCCcch
Confidence              468999999997531     1  112233455788999999999986521   236999999986643    333344


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|+     .+.+..++...|+++++|.||.+ ..+.... +..+.. ...     ......+...+..++|+|+++
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v-~T~~~~~-~~~~~~-~~~-----~~~~~~p~~r~~~peevA~~~  232 (272)
T PRK08159        161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPI-KTLAASG-IGDFRY-ILK-----WNEYNAPLRRTVTIEEVGDSA  232 (272)
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCc-CCHHHhc-CCcchH-HHH-----HHHhCCcccccCCHHHHHHHH
Confidence            5665553     34445556678999999999955 4332110 000000 000     000011233578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++...  ..|+.+.+++|.
T Consensus       233 ~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        233 LYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHhCccccCccceEEEECCCc
Confidence            99998644  458899999874

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.6e-20  Score=159.15  Aligned_cols=206  Identities=14%  Similarity=0.072  Sum_probs=139.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------CCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------GVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------~~d~  154 (333)
                      .+|+|+||||+|+||++++++|+++|++|+++.|+..+.        . ..+++.+|++|+++++ ++++      ++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~-~~~~~~~D~~~~~~~~-~~~~~~~~~~~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------F-PGELFACDLADIEQTA-ATLAQINEIHPVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------c-CceEEEeeCCCHHHHH-HHHHHHHHhCCCcE
Confidence            357899999999999999999999999999999986541        1 1257899999998877 5444      6899


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      ||||+|......   ...+.....+++|+.+..++.+++    + .+.++||++||.+.++..     ....|+.+|.. 
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~Y~~sK~a~  146 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-----DRTSYSAAKSAL  146 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-----CchHHHHHHHHH
Confidence            999999754211   112223345778999988887755    2 366799999999765422     23456655532 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                          +....++.+.|+++++|+||.+ .++......   ........         .......+..++|+|++++.++..
T Consensus       147 ~~~~~~~a~e~~~~gi~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~~~l~~~  216 (234)
T PRK07577        147 VGCTRTWALELAEYGITVNAVAPGPI-ETELFRQTRPVGSEEEKRVL---------ASIPMRRLGTPEEVAAAIAFLLSD  216 (234)
T ss_pred             HHHHHHHHHHHHhhCcEEEEEecCcc-cCcccccccccchhHHHHHh---------hcCCCCCCcCHHHHHHHHHHHhCc
Confidence                2233445567999999999955 444321100   00000000         011222356889999999999987


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      +.  ..|+.+.+.+|
T Consensus       217 ~~~~~~g~~~~~~g~  231 (234)
T PRK07577        217 DAGFITGQVLGVDGG  231 (234)
T ss_pred             ccCCccceEEEecCC
Confidence            53  44889999876

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.8e-21  Score=168.07  Aligned_cols=201  Identities=12%  Similarity=0.057  Sum_probs=137.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      |+|+||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|++++. +++       .++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLT-ALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHHcCCCC
Confidence            47999999999999999999999999999999887665443221  1456888999999988877 444       3789


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||......   ...+..+..+++|+.+..++++++    + .+.++||++||..++.    +......|+.+|..
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~~sKaa  155 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM----QGPAMSSYNVAKAG  155 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC----CCCCchHHHHHHHH
Confidence            9999999764211   111122335678988888877754    2 3668999999998765    44455667766642


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc---hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD---LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                           +.+...+...|+++++|+||.+ .++.....   .+.......          ......+++++|+|+.++.+++
T Consensus       156 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~vA~~i~~~l~  224 (270)
T PRK05650        156 VVALSETLLVELADDEIGVHVVCPSFF-QTNLLDSFRGPNPAMKAQVG----------KLLEKSPITAADIADYIYQQVA  224 (270)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcc-ccCcccccccCchhHHHHHH----------HHhhcCCCCHHHHHHHHHHHHh
Confidence                 2333444556999999999955 45432210   011000000          0011246899999999999998


Q ss_pred             Cc
Q 019935          298 IE  299 (333)
Q Consensus       298 ~~  299 (333)
                      +.
T Consensus       225 ~~  226 (270)
T PRK05650        225 KG  226 (270)
T ss_pred             CC
Confidence            74

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-20  Score=162.53  Aligned_cols=216  Identities=15%  Similarity=0.059  Sum_probs=138.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|||||+|+||++++++|+++|++|++..+ +++..+......  ...++.++.+|++|.+++. ++++       .
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVL-RLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHH-HHHHHHHHHhCC
Confidence            468999999999999999999999999887764 433333322111  1345788999999998887 5443       6


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-CC------C-CCeEEEEeccccccCCCCCccchhhh
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-PS------S-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-~~------~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      +|+||||||......    ..+++....+++|+.++.++++++ +.      + -++||++||.++......   ....|
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---~~~~Y  157 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---EYIDY  157 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---Cccch
Confidence            899999999754211    112223356889999999988865 21      1 247999999866432110   11236


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +.+|..     +.+...+.+.|+++++||||.+ +++..... .+.+......         ......+.+++|++++++
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v-~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~d~a~~~~  227 (248)
T PRK06123        158 AASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVI-YTEIHASGGEPGRVDRVKA---------GIPMGRGGTAEEVARAIL  227 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc-cCchhhccCCHHHHHHHHh---------cCCCCCCcCHHHHHHHHH
Confidence            655432     1222333456999999999965 66643211 1111111111         112233468899999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++....  ..|+.|++++|
T Consensus       228 ~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        228 WLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHhCccccCccCCEEeecCC
Confidence            9998643  45889999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=3.1e-20  Score=163.98  Aligned_cols=215  Identities=15%  Similarity=0.132  Sum_probs=142.8

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcC---cchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +++|++|||||  +++||++++++|+++|++|++..|.   .+..+++....  ....++.+|++|+++++ +++     
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~-~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQID-ALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHH-HHHHHHHH
Confidence            45789999996  6899999999999999999988654   33333333221  22346889999999887 443     


Q ss_pred             --cCCcEEEEcCCCCCCC--------CCCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccch
Q 019935          150 --EGVTHVICCTGTTAFP--------SRRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        +++|++|||||.....        ....++....+++|+.+.+.+++++ ..  ..++||++||.+...    +....
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~----~~~~~  156 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----VVPNY  156 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc----CCCCc
Confidence              5799999999975311        0111233346789999999998865 21  236899999987643    33334


Q ss_pred             hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|+     .+.+...+...|++++.|.||.+ ..+......  .......         ....+...+..++|+|
T Consensus       157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v-~T~~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva  226 (260)
T PRK06997        157 NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPI-KTLAASGIKDFGKILDFV---------ESNAPLRRNVTIEEVG  226 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcc-ccchhccccchhhHHHHH---------HhcCcccccCCHHHHH
Confidence            45666654     34444556678999999999955 443221100  0000000         0111234578999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++.+.  ..|+++.+++|
T Consensus       227 ~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        227 NVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHhCccccCcceeEEEEcCC
Confidence            99999998743  55889999886

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.6e-20  Score=164.61  Aligned_cols=220  Identities=18%  Similarity=0.152  Sum_probs=143.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc-CCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK-QDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      .+++++++||||+|+||++++++|+++|++|++++|+....+..... ....++.++.+|++|+++++ +++       .
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVA-AAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHH-HHHHHHHHHcC
Confidence            45678999999999999999999999999999999986432211110 01346788999999998877 443       3


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+..+..+++|+.+..++++++.     .+.++||++||......   +......|+.+
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---~~~~~~~Y~~s  158 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV---ADPGETAYALT  158 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---CCCCcchHHHH
Confidence            6899999999754211   1111222357789999999998652     24579999999765311   22233456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--------hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      |..     +.....+...|++++.|+||.+ +++.....        ...+...+         ....+...+.+++|+|
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~~~~~~~~va  228 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYV-RTPMAESIARQSNPEDPESVLTEM---------AKAIPLRRLADPLEVG  228 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcc-cCHHHHhhhhhccCCCcHHHHHHH---------hccCCCCCCCCHHHHH
Confidence            542     1222223345899999999954 55532110        00011111         1112334578999999


Q ss_pred             HHHHHhccCc--ccCCcEEEecCCC
Q 019935          290 EACIQALDIE--FTEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~--~~~g~~~~v~~g~  312 (333)
                      +++.+++...  ...|+.+.+++|-
T Consensus       229 ~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        229 ELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHcCchhcCCcCceEeECCCc
Confidence            9999999764  3558889998863

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-20  Score=164.81  Aligned_cols=217  Identities=14%  Similarity=0.070  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCCC-hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ..++++++||||+| +||+++++.|+++|++|++++|+.++.+...+..    ...++.++.+|++|+++++ +++    
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVD-ALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHH-HHHHHHH
Confidence            34568999999997 7999999999999999999999876654433211    1246788999999988877 443    


Q ss_pred             ---cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEeccccccCCCCCccchh
Q 019935          150 ---EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                         ..+|+||||||.....   ....+.....+++|+.+..++++++    + .+ .++||++||...+.    +.....
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~  168 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR----AQHGQA  168 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----CCCCCc
Confidence               4689999999974311   1111223345678999999988865    1 23 46899999876653    223444


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .|+.+|..     +.+...+..+|+++++|+||. ++.+..... .........         .......+..++|+|++
T Consensus       169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~-~~t~~~~~~~~~~~~~~~~---------~~~~~~r~~~p~~va~~  238 (262)
T PRK07831        169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSI-AMHPFLAKVTSAELLDELA---------AREAFGRAAEPWEVANV  238 (262)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCC-ccCcccccccCHHHHHHHH---------hcCCCCCCcCHHHHHHH
Confidence            56655542     222233445799999999994 465543211 111111111         11223467889999999


Q ss_pred             HHHhccCcc--cCCcEEEecC
Q 019935          292 CIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~  310 (333)
                      +++++.+..  ..|+++.+++
T Consensus       239 ~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        239 IAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHcCchhcCcCCceEEeCC
Confidence            999998754  4588888876

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.3e-20  Score=164.67  Aligned_cols=201  Identities=13%  Similarity=0.079  Sum_probs=135.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh--------cCCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--------EGVT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--------~~~d  153 (333)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+++.....+.+++++.+|++|.+++. +++        .++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWD-AALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHcCCCCC
Confidence            4689999999999999999999999999999999887776654433457899999999988877 443        3579


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||......   ..++.....+++|+.++.++++++    + .+.++||++||.....    +......|+.+|..
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sKaa  155 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY----GQPGLAVYSATKFA  155 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc----CCCCchhhHHHHHH
Confidence            9999999764211   112233456889999999998866    2 3567999999986543    22233456554432


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           ..+...+...|+++++|+||.+ .+.............        .   .......+.++|+|++++.++.+.
T Consensus       156 ~~~~~~~l~~~~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~--------~---~~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        156 VRGLTEALDLEWRRHGIRVADVMPLFV-DTAMLDGTSNEVDAG--------S---TKRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCCc-CCcccccccchhhhh--------h---HhhccCCCCHHHHHHHHHHHHhCC
Confidence                 2222333456899999999965 333211100000000        0   001112467899999999999754

>PRK07069 short chain dehydrogenase; Validated

Probab=99.83  E-value=4.6e-20  Score=161.79  Aligned_cols=218  Identities=16%  Similarity=0.122  Sum_probs=137.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhhccCC----CCceEEEEccCCCcCCCchhhh-------cC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      +++||||+|+||+++++.|+++|++|++++|+ .++.+.+.+...    ...+..+.+|++|+++++ +++       .+
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQ-ALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHH-HHHHHHHHHcCC
Confidence            38999999999999999999999999999998 554443332211    123456789999998876 443       46


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHH----HHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWE----GVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~----~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...++....+++|+.    ++.+++++++. +.++||++||...+.    +......|+.+|
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~----~~~~~~~Y~~sK  155 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK----AEPDYTAYNASK  155 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc----CCCCCchhHHHH
Confidence            899999999754211   111222345677887    45555555543 668999999998875    233344566555


Q ss_pred             HH-----HHHHHHHHhc--CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          224 YK-----KMGEDFVQKS--GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       224 ~k-----~~~e~~l~~~--gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      ..     +.+...+...  +++++.|+||.+ .++.......    ..........+....+...+.+++|+|+++++++
T Consensus       156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v-~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (251)
T PRK07069        156 AAVASLTKSIALDCARRGLDVRCNSIHPTFI-RTGIVDPIFQ----RLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLA  230 (251)
T ss_pred             HHHHHHHHHHHHHhcccCCcEEEEEEeeccc-CCcchhHHhh----hccchhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence            42     1222223233  589999999954 5654321110    0000000001111223345678999999999998


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .++.  ..|+.+.+.+|
T Consensus       231 ~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        231 SDESRFVTGAELVIDGG  247 (251)
T ss_pred             CccccCccCCEEEECCC
Confidence            7653  45788888765

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.83  E-value=3.7e-20  Score=161.00  Aligned_cols=171  Identities=16%  Similarity=0.136  Sum_probs=122.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh----hccCCCCceEEEEccCCCcCCCch------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL----FGKQDEETLQVCKGDTRNPKDLDP------  146 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~~~~v~~D~~d~~~~~~------  146 (333)
                      +....+|+|+||||+++||.+++.+|+++|.+++.+.|..++.+.+    .+.....++.++++|++|.+++++      
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            4456789999999999999999999999999999888877666554    222222359999999999999882      


Q ss_pred             hhhcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCC-CCCccchh
Q 019935          147 AIFEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFN-ELPWSIMN  217 (333)
Q Consensus       147 ~~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~-~~~~~~~~  217 (333)
                      ..|+++|++|||||......   ....+....+++|+.|+..+.+++    + .+-+|||.+||++++..- -.+.+..+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~AS  166 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSAS  166 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchH
Confidence            23568999999999876211   122334457899999999999966    2 355899999999987621 11233344


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCEE-EEEcccc
Q 019935          218 LFGVLKYKKMGEDFVQKSGLPFT-IIRAGRL  247 (333)
Q Consensus       218 ~~~~~k~k~~~e~~l~~~gi~~~-~vrpg~~  247 (333)
                      +++....-..+.+++...+..+. .|.||.+
T Consensus       167 K~Al~~f~etLR~El~~~~~~i~i~V~PG~V  197 (282)
T KOG1205|consen  167 KHALEGFFETLRQELIPLGTIIIILVSPGPI  197 (282)
T ss_pred             HHHHHHHHHHHHHHhhccCceEEEEEecCce
Confidence            44444344555566666664433 7999955

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.9e-20  Score=159.83  Aligned_cols=190  Identities=14%  Similarity=0.129  Sum_probs=134.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC----CcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG----VTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~----~d~vi~~  158 (333)
                      ++++||||+|+||++++++|+++|++|++++|++++.+++...  ..++.++.+|++|+++++ ++++.    .|.+|||
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~-~~~~~~~~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAFDVTDHPGTK-AALSQLPFIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--cCCCeEEEeeCCCHHHHH-HHHHhcccCCCEEEEc
Confidence            6899999999999999999999999999999998776665432  346888999999999888 66553    6899999


Q ss_pred             CCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHHH-----HH
Q 019935          159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----KM  227 (333)
Q Consensus       159 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-----~~  227 (333)
                      ||......   ...+.....+++|+.++.++++++..   ..++||++||.....    +......|+.+|..     +.
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asK~a~~~~~~~  154 (240)
T PRK06101         79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----ALPRAEAYGASKAAVAYFART  154 (240)
T ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----CCCCCchhhHHHHHHHHHHHH
Confidence            98643211   11112234688999999999997632   246899999976543    22334456655532     22


Q ss_pred             HHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          228 GEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       228 ~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      +...++..|+++++++||.+ +++....           ..    .    .....++++|+|+.++..++..
T Consensus       155 l~~e~~~~gi~v~~v~pg~i-~t~~~~~-----------~~----~----~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        155 LQLDLRPKGIEVVTVFPGFV-ATPLTDK-----------NT----F----AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHhcCceEEEEeCCcC-CCCCcCC-----------CC----C----CCCcccCHHHHHHHHHHHHhcC
Confidence            33344567999999999955 5554221           00    0    0112478999999999999874

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=7.9e-20  Score=160.95  Aligned_cols=215  Identities=15%  Similarity=0.098  Sum_probs=141.7

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCc-----------chhhhhhccC--CCCceEEEEccCCCcCC
Q 019935           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQ--DEETLQVCKGDTRNPKD  143 (333)
Q Consensus        79 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~~~~~--~~~~~~~v~~D~~d~~~  143 (333)
                      ++++++||||||+|  +||.+++++|+++|++|++++|++           .....+....  ...+++++.+|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35678999999995  799999999999999999999872           1111111111  13468899999999888


Q ss_pred             Cchhhh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccC
Q 019935          144 LDPAIF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF  208 (333)
Q Consensus       144 ~~~~~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~  208 (333)
                      +. +++       ..+|+||||||......   ..++.....+++|+.++.++++++.     ...++||++||...+. 
T Consensus        82 ~~-~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-  159 (256)
T PRK12748         82 PN-RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG-  159 (256)
T ss_pred             HH-HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC-
Confidence            76 333       46899999999753211   1112233457899999999998762     2346999999988765 


Q ss_pred             CCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          209 NELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       209 ~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                         +......|+.+|..     +.+...+...|++++.++||.+ ..+....   .......         .......+.
T Consensus       160 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~-~t~~~~~---~~~~~~~---------~~~~~~~~~  223 (256)
T PRK12748        160 ---PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPT-DTGWITE---ELKHHLV---------PKFPQGRVG  223 (256)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcc-cCCCCCh---hHHHhhh---------ccCCCCCCc
Confidence               44444567655532     1122233456899999999954 4432211   1111100         011112456


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .++|+|+++.+++....  ..|+++++++|
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        224 EPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            78999999999998743  44889999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.83  E-value=1.1e-19  Score=158.80  Aligned_cols=216  Identities=18%  Similarity=0.136  Sum_probs=145.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhcc--CCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGK--QDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~--~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      .++++||||+|+||+++++.|+++|++|++++|+.. ..+.....  ....++.++.+|++|.+++. +++       ..
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECA-EALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            468999999999999999999999999999999853 12222111  11346889999999988877 443       36


Q ss_pred             CcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||+|.....   ....+.....+++|+.+..++++++    + .+.++||++||...+.    +......|+.+|
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----~~~~~~~Y~~sK  156 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK----GQFGQTNYSAAK  156 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc----CCCCChHHHHHH
Confidence            89999999975321   1122233346678999999986644    3 3567999999988765    333344566655


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.....+...|+++++++||.+ .++........+.....         .......+..++|+++++..++..
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~l~~~  226 (245)
T PRK12824        157 AGMIGFTKALASEGARYGITVNCIAPGYI-ATPMVEQMGPEVLQSIV---------NQIPMKRLGTPEEIAAAVAFLVSE  226 (245)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEEccc-CCcchhhcCHHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHcCc
Confidence            3     12333445567999999999966 45432211111111111         112334567889999999999976


Q ss_pred             cc--cCCcEEEecCCC
Q 019935          299 EF--TEGEIYEINSVE  312 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~  312 (333)
                      ..  ..|+.+++++|.
T Consensus       227 ~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        227 AAGFITGETISINGGL  242 (245)
T ss_pred             cccCccCcEEEECCCe
Confidence            43  458999999974

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.5e-20  Score=165.80  Aligned_cols=215  Identities=14%  Similarity=0.105  Sum_probs=138.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+.+.    ..+++++.+|++|+++++ +++       .++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AAGFTAVQLDVNDGAALA-RLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HCCCeEEEeeCCCHHHHH-HHHHHHHHhcCCCCE
Confidence            368999999999999999999999999999999987766554    335788899999988877 443       47899


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH--
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k--  225 (333)
                      ||||||......   ..++.....+++|+.++.++++++    +.+.+++|++||.....    +......|+.+|..  
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~al~  151 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL----VTPFAGAYCASKAAVH  151 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC----CCCCccHHHHHHHHHH
Confidence            999999753211   112233446789999999999865    23457899999987654    22334556655532  


Q ss_pred             ---HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCC--------CcccccccHHHHHHHHHH
Q 019935          226 ---KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQG--------DKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       226 ---~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~v~Dva~a~~~  294 (333)
                         +.+..++...|+++++++||.+ .++.............. ... ..+...        .....+..++|+|+.++.
T Consensus       152 ~~~~~l~~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~  228 (274)
T PRK05693        152 ALSDALRLELAPFGVQVMEVQPGAI-ASQFASNASREAEQLLA-EQS-PWWPLREHIQARARASQDNPTPAAEFARQLLA  228 (274)
T ss_pred             HHHHHHHHHhhhhCeEEEEEecCcc-ccccccccccchhhcCC-CCC-ccHHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence               2233344567999999999965 44432110000000000 000 000000        000134679999999999


Q ss_pred             hccCcccCCcEEEec
Q 019935          295 ALDIEFTEGEIYEIN  309 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~  309 (333)
                      ++..+.. ...+.++
T Consensus       229 ~~~~~~~-~~~~~~g  242 (274)
T PRK05693        229 AVQQSPR-PRLVRLG  242 (274)
T ss_pred             HHhCCCC-CceEEec
Confidence            9986542 2234444

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=2.7e-19  Score=157.62  Aligned_cols=215  Identities=13%  Similarity=0.027  Sum_probs=143.1

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCc-----------chhhhhhccC--CCCceEEEEccCCCcCC
Q 019935           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQ--DEETLQVCKGDTRNPKD  143 (333)
Q Consensus        79 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~~~~~--~~~~~~~v~~D~~d~~~  143 (333)
                      .+++|+++||||+|  +||++++++|+++|++|++++|..           ++...+....  .+.++.++.+|++|+++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46789999999995  899999999999999999875421           1111111111  14567889999999988


Q ss_pred             Cchhhh-------cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccC
Q 019935          144 LDPAIF-------EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF  208 (333)
Q Consensus       144 ~~~~~~-------~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~  208 (333)
                      ++ +++       ..+|+||||||.....   ....+.....+++|+.+...+.+++    + .+.++||++||..... 
T Consensus        83 i~-~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-  160 (256)
T PRK12859         83 PK-ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-  160 (256)
T ss_pred             HH-HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-
Confidence            87 443       3589999999975421   1112223345788999998887643    2 2456999999988754 


Q ss_pred             CCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          209 NELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       209 ~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                         +......|+.+|..     +.+...+...|++++.|+||.+ .++....   .......         .......+.
T Consensus       161 ---~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i-~t~~~~~---~~~~~~~---------~~~~~~~~~  224 (256)
T PRK12859        161 ---PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPT-DTGWMTE---EIKQGLL---------PMFPFGRIG  224 (256)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccc-cCCCCCH---HHHHHHH---------hcCCCCCCc
Confidence               44455667766642     3444555667999999999955 4443211   1111110         011223467


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .++|+|+++++++....  ..|+++.+++|
T Consensus       225 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        225 EPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            89999999999998743  45888888875

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=4.7e-20  Score=162.25  Aligned_cols=202  Identities=17%  Similarity=0.162  Sum_probs=135.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh--------cCCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--------EGVT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--------~~~d  153 (333)
                      .++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.    ..+++.+.+|++|.+++. .++        .++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~~~-~~~~~i~~~~~~~~~   76 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SLGFTGILLDLDDPESVE-RAADEVIALTDNRLY   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hCCCeEEEeecCCHHHHH-HHHHHHHHhcCCCCe
Confidence            368999999999999999999999999999999987766554    335788999999987765 332        3579


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHH----HhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLV----SALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~----~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      .+||++|......   ..++.....+++|+.|+.++.    ++++ .+.++||++||..+..    +......|+.+|..
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~sK~~  152 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI----STPGRGAYAASKYA  152 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc----CCCCccHHHHHHHH
Confidence            9999998653211   122233356788999988864    4443 3678999999986653    33445567766543


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc-ccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG-ERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           ..+..++...++++++++||.+ .++..        ..... .........+...+.+++++|+|+++..+++++
T Consensus       153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~-~t~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        153 LEAWSDALRMELRHSGIKVSLIEPGPI-RTRFT--------DNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEeCCCc-ccchh--------hcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence                 1222345567999999999955 32211        11100 001111112223346799999999999999876


Q ss_pred             cc
Q 019935          300 FT  301 (333)
Q Consensus       300 ~~  301 (333)
                      ..
T Consensus       224 ~~  225 (256)
T PRK08017        224 KP  225 (256)
T ss_pred             CC
Confidence            53

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.6e-20  Score=163.64  Aligned_cols=214  Identities=15%  Similarity=0.127  Sum_probs=142.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------cCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------EGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------~~~  152 (333)
                      |+|+++|||| |+||+++++.|+ +|++|++++|+.++.+...+...  +.++.++.+|++|+++++ +++      .++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~-~~~~~~~~~g~i   77 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVK-ALAATAQTLGPV   77 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHH-HHHHHHHhcCCC
Confidence            4578999998 799999999996 89999999998766554432221  346788999999998887 444      468


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCC-------------------
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNE-------------------  210 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~-------------------  210 (333)
                      |+||||||....    ..+....+++|+.+++++++++..   ..+++|++||........                   
T Consensus        78 d~li~nAG~~~~----~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (275)
T PRK06940         78 TGLVHTAGVSPS----QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLS  153 (275)
T ss_pred             CEEEECCCcCCc----hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccc
Confidence            999999997531    233455889999999999996621   124678888876643210                   


Q ss_pred             CCc-------cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH----HHHHHhhcccceeecC
Q 019935          211 LPW-------SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN----TLLKATAGERRAVLMG  274 (333)
Q Consensus       211 ~~~-------~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~  274 (333)
                      .+.       .....|+.+|+-     +.+...+...|+++++|+||.+ .++.....+.    .......         
T Consensus       154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v-~T~~~~~~~~~~~~~~~~~~~---------  223 (275)
T PRK06940        154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGII-STPLAQDELNGPRGDGYRNMF---------  223 (275)
T ss_pred             cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcC-cCccchhhhcCCchHHHHHHh---------
Confidence            000       123456666542     2233345567999999999955 5553211000    0000000         


Q ss_pred             CCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          275 QGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       275 ~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .......+..++|+|+++++++++..  ..|+.+.+++|
T Consensus       224 ~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        224 AKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             hhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            01123468899999999999997643  45889999886

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.83  E-value=7.5e-19  Score=156.08  Aligned_cols=216  Identities=28%  Similarity=0.334  Sum_probs=167.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      ++||||||||++|++++++|+++|++|++++|++++...+.     .+++++.+|+.++..+. ..+.|+|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~-~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLV-AGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHH-HHhccccEEEEEeccc
Confidence            47999999999999999999999999999999998887764     68899999999999999 8999999999998764


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII  242 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~v  242 (333)
                      . .     .. ...........+..+++..++++++++|...+..        .+.-.+.+.|..+|+.+...|++++++
T Consensus        75 ~-~-----~~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~--------~~~~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          75 D-G-----SD-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA--------ASPSALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             c-c-----cc-chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC--------CCccHHHHHHHHHHHHHHhcCCCeEEE
Confidence            2 1     11 3455666777777777666788999999888743        122346688999999999999999999


Q ss_pred             EcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCccc
Q 019935          243 RAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQK  322 (333)
Q Consensus       243 rpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s  322 (333)
                      |+..++.+.....    ..............+  ....+++..+|++.++...+..+...+++|.+.+       +...+
T Consensus       140 r~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g-------~~~~~  206 (275)
T COG0702         140 RRAAFYLGAGAAF----IEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPATAGRTYELAG-------PEALT  206 (275)
T ss_pred             ecCeeeeccchhH----HHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcccCcEEEccC-------Cceec
Confidence            9776755443221    112222222223333  3377899999999999999998877789999999       57888


Q ss_pred             HHHHHHHHhc
Q 019935          323 WRELFKAAKA  332 (333)
Q Consensus       323 ~~e~~~~i~~  332 (333)
                      ..|+.+.+.+
T Consensus       207 ~~~~~~~l~~  216 (275)
T COG0702         207 LAELASGLDY  216 (275)
T ss_pred             HHHHHHHHHH
Confidence            8888877653

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6e-20  Score=160.42  Aligned_cols=193  Identities=17%  Similarity=0.136  Sum_probs=134.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc----CCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE----GVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~----~~d~  154 (333)
                      +|+|+||||+|+||.+++++|+++|++|++++|++++.+......   ...+++++++|++|+++++ ++++    .+|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHA-AFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHH-HHHHHHhhcCCE
Confidence            468999999999999999999999999999999987655433211   1457889999999999887 5544    4699


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      ||||+|......   ..+++....+++|+.++.++++++.     .+.++||++||.....    +......|+.+|.. 
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~  155 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR----GRASNYVYGSAKAAL  155 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC----CCCCCcccHHHHHHH
Confidence            999998754211   1122223457889999999998652     3568999999986543    22233456655532 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                          ......+.+.|+++++|+||.+ +++...            ...       .....+++++|+|+.++++++++
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v-~t~~~~------------~~~-------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFV-RTPMTA------------GLK-------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcc-cChhhh------------ccC-------CCccccCCHHHHHHHHHHHHhCC
Confidence                2233345567999999999955 543211            000       01123678999999999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.5e-19  Score=155.85  Aligned_cols=194  Identities=12%  Similarity=0.078  Sum_probs=138.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc----CCcEEEEcC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----GVTHVICCT  159 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~----~~d~vi~~a  159 (333)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+.....   .+++++.+|++|+++++ ++++    .+|++||||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~v~-~~~~~~~~~id~lv~~a   77 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE---LDVDAIVCDNTDPASLE-EARGLFPHHLDTIVNVP   77 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCcEEecCCCCHHHHH-HHHHHHhhcCcEEEECC
Confidence            699999999999999999999999999999998776655432   24678899999999888 5554    689999999


Q ss_pred             CCCCC---CC----C-CCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHH----
Q 019935          160 GTTAF---PS----R-RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (333)
Q Consensus       160 ~~~~~---~~----~-~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~----  224 (333)
                      |....   +.    . ..+.....+++|+.+.+++++++..   ..++||++||...        .....|+.+|+    
T Consensus        78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------~~~~~Y~asKaal~~  149 (223)
T PRK05884         78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------PAGSAEAAIKAALSN  149 (223)
T ss_pred             CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------CCccccHHHHHHHHH
Confidence            85311   10    0 1223445778999999999997621   2369999999762        11234665553    


Q ss_pred             -HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--c
Q 019935          225 -KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--T  301 (333)
Q Consensus       225 -k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~  301 (333)
                       .+.+..++...|++++.|.||.+ ..+.       + ...   .          ..+...++|+|+++.++++...  .
T Consensus       150 ~~~~la~e~~~~gI~v~~v~PG~v-~t~~-------~-~~~---~----------~~p~~~~~~ia~~~~~l~s~~~~~v  207 (223)
T PRK05884        150 WTAGQAAVFGTRGITINAVACGRS-VQPG-------Y-DGL---S----------RTPPPVAAEIARLALFLTTPAARHI  207 (223)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcc-Cchh-------h-hhc---c----------CCCCCCHHHHHHHHHHHcCchhhcc
Confidence             34555566678999999999965 3221       0 000   0          0112378999999999998644  4


Q ss_pred             CCcEEEecCC
Q 019935          302 EGEIYEINSV  311 (333)
Q Consensus       302 ~g~~~~v~~g  311 (333)
                      .|+++.+++|
T Consensus       208 ~G~~i~vdgg  217 (223)
T PRK05884        208 TGQTLHVSHG  217 (223)
T ss_pred             CCcEEEeCCC
Confidence            5888988876

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.5e-18  Score=156.97  Aligned_cols=222  Identities=18%  Similarity=0.175  Sum_probs=138.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh----ccCCCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF----GKQDEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      ++++++|+|+||||+|+||++++++|+++|++|++++|+.++.+...    ......+++++.+|++|.++++ +++   
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~-~~~~~~   89 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVR-AAADAL   89 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHH-HHHHHH
Confidence            55678899999999999999999999999999999999876654322    1111346888999999998887 443   


Q ss_pred             ----cCCcEEEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHH----hcCC-CCCeEEEEeccccccCC---------C
Q 019935          150 ----EGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVS----ALPS-SLKRIVLVSSVGVTKFN---------E  210 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~----a~~~-~~~~~v~~SS~~~~~~~---------~  210 (333)
                          .++|+||||||....+. ...+.....+++|+.+.+.+++    .++. +.++||++||.+.+...         +
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  169 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWE  169 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcc
Confidence                36899999999764321 1233445678899999666555    3333 45799999998754311         1


Q ss_pred             CCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEE--EcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          211 LPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTII--RAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       211 ~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~v--rpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      .++.+...|+.+|..     +.+...+...|++++++  .||.+ .++.... ++........     .++   . +-..
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v-~T~~~~~-~~~~~~~~~~-----~~~---~-~~~~  238 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVS-NTELARN-LPRALRPVAT-----VLA---P-LLAQ  238 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcc-cCccccc-CcHHHHHHHH-----HHH---h-hhcC
Confidence            123445667766642     22223344567777665  59954 5543321 1111110000     000   0 0123


Q ss_pred             cHHHHHHHHHHhccCcc-cCCcEEEecC
Q 019935          284 SRIVVAEACIQALDIEF-TEGEIYEINS  310 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~-~~g~~~~v~~  310 (333)
                      .++.-+..+++++..+. ..|..|+.++
T Consensus       239 ~~~~g~~~~~~~~~~~~~~~g~~~~~~~  266 (306)
T PRK06197        239 SPEMGALPTLRAATDPAVRGGQYYGPDG  266 (306)
T ss_pred             CHHHHHHHHHHHhcCCCcCCCeEEccCc
Confidence            45667777777776654 3465555543

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.5e-19  Score=161.87  Aligned_cols=235  Identities=15%  Similarity=0.066  Sum_probs=152.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      .++++|+++||||+|+||++++++|+++|++|++.+|+. ...+.....+  .+.++.++.+|++|+++++ +++     
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~-~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATAD-ELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999998753 2333222211  1456888999999988877 443     


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC----C--------CCCeEEEEeccccccCCCCCc
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--------SLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~----~--------~~~~~v~~SS~~~~~~~~~~~  213 (333)
                       .++|+||||||......   ...+.....+++|+.+++++++++.    .        ..++||++||.....    +.
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~  162 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV----GP  162 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc----CC
Confidence             47899999999864211   1122233467899999999998652    1        125899999987654    22


Q ss_pred             cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       214 ~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .....|+.+|..     +.+...+..+|+++++|+|| + ......    ...   ...... .    .....+++++|+
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~-~t~~~~----~~~---~~~~~~-~----~~~~~~~~pe~v  228 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-A-RTAMTA----DVF---GDAPDV-E----AGGIDPLSPEHV  228 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-C-CCchhh----hhc---cccchh-h----hhccCCCCHHHH
Confidence            233456655532     22334455679999999998 4 222111    000   000000 0    011245689999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCCCC-----------CCCCCcccHHHHHHHHh
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVEGE-----------GPGSDPQKWRELFKAAK  331 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~~~-----------~~~~~~~s~~e~~~~i~  331 (333)
                      |.++++++....  ..|++|.+.+|.-.           ...+..++.+|+.+.+.
T Consensus       229 a~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (306)
T PRK07792        229 VPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLR  284 (306)
T ss_pred             HHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHH
Confidence            999999998643  45888998876411           01124567777776654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7e-20  Score=158.58  Aligned_cols=210  Identities=17%  Similarity=0.178  Sum_probs=143.6

Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc---CCcEEEEcCCC
Q 019935           86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE---GVTHVICCTGT  161 (333)
Q Consensus        86 lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~---~~d~vi~~a~~  161 (333)
                      |||||+|+||++++++|+++|++|++++|++++.+....... ..+++++.+|++|++++. ++++   ++|++|||+|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVD-AFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHhcCCCCEEEECCCC
Confidence            699999999999999999999999999998766554432211 356889999999999988 6665   58999999997


Q ss_pred             CCCC---CCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHh---
Q 019935          162 TAFP---SRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK---  234 (333)
Q Consensus       162 ~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~---  234 (333)
                      ....   ....+.....+++|+.+..+++++... +.++||++||.+++.    +..+.+.|+.+|.  .++.+.+.   
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~~sK~--a~~~~~~~la~  153 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR----PSASGVLQGAINA--ALEALARGLAL  153 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC----CCCcchHHHHHHH--HHHHHHHHHHH
Confidence            5421   111223445678899999999995432 567999999998876    4445556765543  33333322   


Q ss_pred             --cCCCEEEEEcccccCCCCCCcch----HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEe
Q 019935          235 --SGLPFTIIRAGRLTDGPYTSYDL----NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI  308 (333)
Q Consensus       235 --~gi~~~~vrpg~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v  308 (333)
                        .+++++.++||.+ .++......    ..+.....         .......+.+++|+|++++.++.+....|+.|++
T Consensus       154 e~~~irv~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~~~~~~G~~~~v  223 (230)
T PRK07041        154 ELAPVRVNTVSPGLV-DTPLWSKLAGDAREAMFAAAA---------ERLPARRVGQPEDVANAILFLAANGFTTGSTVLV  223 (230)
T ss_pred             HhhCceEEEEeeccc-ccHHHHhhhccchHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhcCCCcCCcEEEe
Confidence              2589999999955 433211000    00111000         0011223567899999999999876566899999


Q ss_pred             cCCC
Q 019935          309 NSVE  312 (333)
Q Consensus       309 ~~g~  312 (333)
                      ++|.
T Consensus       224 ~gg~  227 (230)
T PRK07041        224 DGGH  227 (230)
T ss_pred             CCCe
Confidence            9873

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.82  E-value=1.1e-19  Score=179.72  Aligned_cols=229  Identities=14%  Similarity=0.085  Sum_probs=147.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhc----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      .+.+|+||||||+|+||++++++|+++|++|++++|+.+..+......    ....+..+.+|++|++++. ++++    
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~-~a~~~i~~  489 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVK-AAFADVAL  489 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999999876655433211    1235778999999999887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEeccccccCCCCCccchhh
Q 019935          151 ---GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         ++|+||||||.......   ..+.....+++|+.+.+++++++    + .+ .++||++||..+..    +......
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~----~~~~~~a  565 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY----AGKNASA  565 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC----CCCCCHH
Confidence               79999999997542111   11112335678888888877643    2 23 35899999987644    3334556


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCC--CCcchH-HHHHHhhcccc-eeecCCCCcccccccHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPY--TSYDLN-TLLKATAGERR-AVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~--~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva  289 (333)
                      |+.+|..     +.+...+...|++++.|+||.+..+..  ...... ........... ...+........+++++|+|
T Consensus       566 Y~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA  645 (676)
T TIGR02632       566 YSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIA  645 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHH
Confidence            7766642     222233345689999999997643321  110000 00000000000 00112234456789999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.+..  ..|+++++++|.
T Consensus       646 ~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       646 EAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             HHHHHHhCCcccCCcCcEEEECCCc
Confidence            99999987543  448999999874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=1.2e-19  Score=160.17  Aligned_cols=220  Identities=15%  Similarity=0.102  Sum_probs=145.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +++++++|||||+|+||+++++.|+++|++|+++.|+.. .........  .+.++.++.+|++|.+++. +++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~-~~~~~~~~~   82 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVV-NLIQTAVKE   82 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHH-HHHHHHHHH
Confidence            356789999999999999999999999999999888543 222221111  1446778999999998877 443      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       .++|+||||||......   ...+.....+++|+.+..++++++    + .+ .++||++||...+.    +......|
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y  158 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI----PWPLFVHY  158 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC----CCCCCccc
Confidence             36899999999753211   111222345788988887766643    2 23 36999999987654    44555667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|+.     +.+...+...|+++++|+||.+ .++.....+  +.......         .......+..++|+|+++
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~va~~~  228 (261)
T PRK08936        159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAI-NTPINAEKFADPKQRADVE---------SMIPMGYIGKPEEIAAVA  228 (261)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcC-CCCccccccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHH
Confidence            766642     2333344566999999999955 565432111  11111100         112234578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++.+..  ..|+.+.+++|..
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGGMT  251 (261)
T ss_pred             HHHcCcccCCccCcEEEECCCcc
Confidence            99998644  4588888888643

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.82  E-value=1.3e-19  Score=157.91  Aligned_cols=214  Identities=17%  Similarity=0.142  Sum_probs=141.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      |++|||||+|+||++++++|+++|++|+++.| +..+.+......  ...++.++.+|++|+++++ +++       ..+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCK-AAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHH-HHHHHHHHHcCCC
Confidence            57999999999999999999999999999988 444333222111  1356889999999988776 433       468


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||+|.....   ....+.....+++|+.+...+++++    + .+.++||++||.....    +......|+.+|.
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----~~~~~~~y~~sk~  155 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK----GQFGQTNYSAAKA  155 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----CCCCcchhHHHHH
Confidence            9999999975321   1112223345678999988876644    3 3667999999986543    2223345665553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .     +.+.+.+...|++++.++||.+ .++......+.+......         ......+..++|+++++.+++.++
T Consensus       156 a~~~~~~~la~~~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       156 GMIGFTKALAQEGATKGVTVNTISPGYI-ATDMVMAMREDVLNSIVA---------QIPVGRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCCC-cCccccccchHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCch
Confidence            2     2333344556999999999965 444332111222111111         122335678899999999988775


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+.+.+.+|
T Consensus       226 ~~~~~G~~~~~~gg  239 (242)
T TIGR01829       226 AGYITGATLSINGG  239 (242)
T ss_pred             hcCccCCEEEecCC
Confidence            3  45889999986

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.2e-19  Score=160.07  Aligned_cols=218  Identities=13%  Similarity=0.098  Sum_probs=146.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+++|+++||||+|+||++++++|+++|++ |++++|+.++........  ...++.++.+|+++++++. +++      
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   81 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCR-RVVAAADEA   81 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            456789999999999999999999999998 999999876554332111  1446778999999998877 444      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C----CC-CCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P----SS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       .++|+||||+|......   ...+.....+++|+.+..++++++ +    .+ .++||++||...++    +......|
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y  157 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG----GQPFLAAY  157 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc----CCCCcchh
Confidence             36899999999754211   111122335788999999998865 1    22 36899999998865    23334567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-------HHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-------NTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      +.+|.-     +.....+...+++++.++||.+ +++......       ..+....         ........+++++|
T Consensus       158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~-~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  227 (260)
T PRK06198        158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKA---------AATQPFGRLLDPDE  227 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccc-cCcchhhhhhhccCCChHHHHHH---------hccCCccCCcCHHH
Confidence            665532     1112223346899999999955 555421100       0011100         01123456789999


Q ss_pred             HHHHHHHhccCcc--cCCcEEEecCC
Q 019935          288 VAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +|+++++++.+..  ..|+.+.++++
T Consensus       228 ~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        228 VARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             HHHHHHHHcChhhCCccCceEeECCc
Confidence            9999999997654  35889999885

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.82  E-value=4.2e-19  Score=156.34  Aligned_cols=228  Identities=15%  Similarity=0.082  Sum_probs=156.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCch-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDP-----  146 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~-----  146 (333)
                      +..+.+|+++||||+.+||++++++|++.|++|++..|+.++.++.....     ...++..+.+|++++++.++     
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            34678899999999999999999999999999999999988765543221     13568889999998876652     


Q ss_pred             --hhhcCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHH-HHHHHHhc----CC-CCCeEEEEeccccccCCC-C-C
Q 019935          147 --AIFEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEG-VRNLVSAL----PS-SLKRIVLVSSVGVTKFNE-L-P  212 (333)
Q Consensus       147 --~~~~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~-~~~l~~a~----~~-~~~~~v~~SS~~~~~~~~-~-~  212 (333)
                        +.+..+|++|||||......    ...+.....+++|+.| .+.+.+++    ++ +...++++||.+.....- . .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence              22467999999999876331    2233445578899995 66666665    22 556899999987765221 1 2


Q ss_pred             ccchhhhHHHHHHHHHHHHHHhcCCCEEEEEcccccCCCC-CCcc----hHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          213 WSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPY-TSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       213 ~~~~~~~~~~k~k~~~e~~l~~~gi~~~~vrpg~~~~g~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      .+..++.++....+.+...|.++|+|+++|.||.+ .++. ....    ...+...       .......+...+..++|
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i-~T~~~~~~~~~~~~~~~~~~-------~~~~~~~p~gr~g~~~e  234 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLV-KTSLRAAGLDDGEMEEFKEA-------TDSKGAVPLGRVGTPEE  234 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcE-eCCccccccccchhhHHhhh-------hccccccccCCccCHHH
Confidence            33333444444567788888999999999999955 3332 1100    0111111       00111224457888999


Q ss_pred             HHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          288 VAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       288 va~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +|+.+.+++.+..  ..|+.+.+++|.
T Consensus       235 va~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  235 VAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             HHHhHHhhcCcccccccCCEEEEeCCE
Confidence            9999999998864  347888888863

>PRK08264 short chain dehydrogenase; Validated

Probab=99.82  E-value=3e-19  Score=155.48  Aligned_cols=188  Identities=22%  Similarity=0.207  Sum_probs=133.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTH  154 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~  154 (333)
                      ...+++|+||||+|+||++++++|+++|+ +|++++|+.++.+. .    ..+++++.+|++|+++++ ++++   .+|+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~----~~~~~~~~~D~~~~~~~~-~~~~~~~~id~   76 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-L----GPRVVPLQLDVTDPASVA-AAAEAASDVTI   76 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-c----CCceEEEEecCCCHHHHH-HHHHhcCCCCE
Confidence            45668999999999999999999999998 99999998776554 1    567899999999999887 6555   5899


Q ss_pred             EEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          155 VICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       155 vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      |||++|.....    ....+.....+++|+.+..++++++.     .+.++||++||...+.    +......|+.+|..
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----~~~~~~~y~~sK~a  152 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----NFPNLGTYSASKAA  152 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----CCCCchHhHHHHHH
Confidence            99999973211    11122233456789999999998752     3567899999988765    34444556655432


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           +.....+.+.|+++++++||.+ +++....                      .....++++|+++.++..+...
T Consensus       153 ~~~~~~~l~~~~~~~~i~~~~v~pg~v-~t~~~~~----------------------~~~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        153 AWSLTQALRAELAPQGTRVLGVHPGPI-DTDMAAG----------------------LDAPKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeCCcc-ccccccc----------------------CCcCCCCHHHHHHHHHHHHhCC
Confidence                 1112233446999999999955 4432110                      0012577788888888887753

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.7e-19  Score=157.68  Aligned_cols=223  Identities=13%  Similarity=0.089  Sum_probs=137.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----hhhhhhccC--CCCceEEEEccCCCcCCCchhhh---
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      .+++|++|||||+|+||+++++.|+++|++|+++.++..    ..+.+....  .+.++.++.+|++|+++++ +++   
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~   83 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVE-KLFDDA   83 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHH-HHHHHH
Confidence            345689999999999999999999999999887765432    222221111  1346888999999998887 444   


Q ss_pred             ----cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 ----EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                          .++|+||||||.....   ....+.....+++|+.++..+++++..   ..+++++++|.....    +......|
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~----~~~~~~~Y  159 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA----FTPFYSAY  159 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc----cCCCcccc
Confidence                3689999999975321   112223445678899999999987632   135677663332211    11223446


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +.+|.     .+.+..++...|+++++++||.+ .++..... .......   ... ...........+.+++|+|+++.
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~dva~~~~  234 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPM-DTPFFYPQEGAEAVAY---HKT-AAALSPFSKTGLTDIEDIVPFIR  234 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCcc-ccchhccccccchhhc---ccc-cccccccccCCCCCHHHHHHHHH
Confidence            55543     23333344446899999999965 44422110 0000000   000 00011112236889999999999


Q ss_pred             HhccCcc-cCCcEEEecCC
Q 019935          294 QALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~-~~g~~~~v~~g  311 (333)
                      ++++... ..|+++++++|
T Consensus       235 ~l~~~~~~~~g~~~~~~gg  253 (257)
T PRK12744        235 FLVTDGWWITGQTILINGG  253 (257)
T ss_pred             HhhcccceeecceEeecCC
Confidence            9998632 34899999986

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.81  E-value=3.9e-19  Score=176.90  Aligned_cols=210  Identities=15%  Similarity=0.130  Sum_probs=142.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      .+.|+||||||+||||++|++.|.++|++|...                      .+|++|.+.+. ..+.  ++|+|||
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~----------------------~~~l~d~~~v~-~~i~~~~pd~Vih  434 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG----------------------KGRLEDRSSLL-ADIRNVKPTHVFN  434 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee----------------------ccccccHHHHH-HHHHhhCCCEEEE
Confidence            345689999999999999999999999987311                      13566777676 5555  6899999


Q ss_pred             cCCCCCCCCC--CCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCc-------cchhhhH
Q 019935          158 CTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPW-------SIMNLFG  220 (333)
Q Consensus       158 ~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~-------~~~~~~~  220 (333)
                      +|+....+..  ....+...+++|+.++.+++++++. +++ +|++||..+|+..       ..++       ++.+.||
T Consensus       435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg  513 (668)
T PLN02260        435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYS  513 (668)
T ss_pred             CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhh
Confidence            9998653211  1234566789999999999998865 775 6677887776421       1122       1235566


Q ss_pred             HHHHHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          221 VLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       221 ~~k~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                        ++|..+|.+++.+ -++.++|+.++ ++.... ....|+..+........++     .+..+++|++.+++.++....
T Consensus       514 --~sK~~~E~~~~~~-~~~~~~r~~~~-~~~~~~-~~~nfv~~~~~~~~~~~vp-----~~~~~~~~~~~~~~~l~~~~~  583 (668)
T PLN02260        514 --KTKAMVEELLREY-DNVCTLRVRMP-ISSDLS-NPRNFITKISRYNKVVNIP-----NSMTVLDELLPISIEMAKRNL  583 (668)
T ss_pred             --HHHHHHHHHHHhh-hhheEEEEEEe-cccCCC-CccHHHHHHhccceeeccC-----CCceehhhHHHHHHHHHHhCC
Confidence              6678899888776 46777787755 432211 0122333333222222222     246777889988888886422


Q ss_pred             cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          301 TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       301 ~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                        +.+||++++       ..+||.|+++.|.+
T Consensus       584 --~giyni~~~-------~~~s~~e~a~~i~~  606 (668)
T PLN02260        584 --RGIWNFTNP-------GVVSHNEILEMYKD  606 (668)
T ss_pred             --CceEEecCC-------CcCcHHHHHHHHHH
Confidence              579999995       67999999998865

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=8.4e-20  Score=159.92  Aligned_cols=217  Identities=17%  Similarity=0.089  Sum_probs=138.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      |+|+||||||+|+||+++++.|+++|++|+++. |++++.+......  ...++.++.+|++|+++++ +++       .
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~   79 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVI-AMFDAVQSAFG   79 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHH-HHHHHHHHhcC
Confidence            357999999999999999999999999998765 5544443332211  1346889999999988876 433       4


Q ss_pred             CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-CC----C---CCeEEEEeccccccCCCCCccchhh
Q 019935          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-PS----S---LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-~~----~---~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      .+|+||||||......    ...++....+.+|+.+..++++++ +.    +   -.+||++||.+.+....   .....
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---~~~~~  156 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---NEYVD  156 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---CCCcc
Confidence            6899999999753211    111122335788999998887643 21    1   24699999986643211   11234


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      |+.+|..     +.+...+...|+++++++||.+ +++..... ........         ........+.+++|+|+.+
T Consensus       157 Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~e~va~~~  226 (248)
T PRK06947        157 YAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLI-ETEIHASGGQPGRAARL---------GAQTPLGRAGEADEVAETI  226 (248)
T ss_pred             cHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCc-ccccccccCCHHHHHHH---------hhcCCCCCCcCHHHHHHHH
Confidence            6655532     2222334456899999999955 66542210 11111100         1111222357889999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.++.  ..|+.+.+++|
T Consensus       227 ~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        227 VWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHcCccccCcCCceEeeCCC
Confidence            99998764  45888888774

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.81  E-value=3.1e-19  Score=155.47  Aligned_cols=211  Identities=14%  Similarity=0.085  Sum_probs=141.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      |+||||+|+||.++++.|+++|++|++++|+. ++.+......  ...++.++.+|++|++++. +++       ..+|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACR-TLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHH-HHHHHHHHHcCCCCE
Confidence            68999999999999999999999999998754 3333222111  1456889999999998876 443       36799


Q ss_pred             EEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          155 VICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       155 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +|||+|.....   ...+++....+++|+.++.++++++     + .+.++||++||.+...    +......|+.+|..
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~~sK~a  155 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM----GNRGQVNYSAAKAG  155 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc----CCCCCcchHHHHHH
Confidence            99999975421   1223334457788999999998854     2 3457999999987644    22334456655532


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                           +.+...+...|++++.|+||.+ .++.... .........         ...+...+..++|+|+++++++.++.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~va~~~~~l~~~~~  224 (239)
T TIGR01831       156 LIGATKALAVELAKRKITVNCIAPGLI-DTEMLAE-VEHDLDEAL---------KTVPMNRMGQPAEVASLAGFLMSDGA  224 (239)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEEccC-ccccchh-hhHHHHHHH---------hcCCCCCCCCHHHHHHHHHHHcCchh
Confidence                 3333445567999999999954 5554321 111111110         01123356788999999999998754


Q ss_pred             --cCCcEEEecCC
Q 019935          301 --TEGEIYEINSV  311 (333)
Q Consensus       301 --~~g~~~~v~~g  311 (333)
                        ..|+.+.+.+|
T Consensus       225 ~~~~g~~~~~~gg  237 (239)
T TIGR01831       225 SYVTRQVISVNGG  237 (239)
T ss_pred             cCccCCEEEecCC
Confidence              44788888875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-19  Score=159.50  Aligned_cols=203  Identities=12%  Similarity=0.113  Sum_probs=135.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-------hhhhccC--CCCceEEEEccCCCcCCCchhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-------TTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      ++++++++||||+|+||+++++.|+++|++|++++|+.+..       +......  .+.++.++.+|++|++++. +++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~-~~~   81 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVA-AAV   81 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHH
Confidence            45678999999999999999999999999999999976431       1111110  1456888999999999887 444


Q ss_pred             c-------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCcc
Q 019935          150 E-------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       150 ~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                      +       ++|+||||||......   ...+.....+++|+.++.++++++.     .+.+++|++||......  ....
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~  159 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP--KWFA  159 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc--cccC
Confidence            3       7899999999754211   1112234467799999999999762     23468999998754321  1113


Q ss_pred             chhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       215 ~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ....|+.+|..     +.+...+...|++++.|+||.++..+.        ......        .......+..++|+|
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~--------~~~~~~--------~~~~~~~~~~p~~va  223 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA--------VRNLLG--------GDEAMRRSRTPEIMA  223 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH--------HHhccc--------ccccccccCCHHHHH
Confidence            44566655532     222334445699999999995433221        111110        111223578999999


Q ss_pred             HHHHHhccCcc
Q 019935          290 EACIQALDIEF  300 (333)
Q Consensus       290 ~a~~~~l~~~~  300 (333)
                      +++++++....
T Consensus       224 ~~~~~l~~~~~  234 (273)
T PRK08278        224 DAAYEILSRPA  234 (273)
T ss_pred             HHHHHHhcCcc
Confidence            99999998754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.8e-19  Score=158.11  Aligned_cols=200  Identities=19%  Similarity=0.160  Sum_probs=136.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhh------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIF------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~------~~~  152 (333)
                      ++++++|||||+|+||++++++|+++|++|++++|++++.+.+.... ...++.++.+|++|+++++ .++      .++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~~~~~~i   81 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGRE-AVLARAREMGGI   81 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHhcCCC
Confidence            45689999999999999999999999999999999987665543221 1347889999999998876 443      468


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||......   ...+.....+++|+.|+.++++++.     .+.+++|++||.....    +......|+.+|.
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~  157 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI----GYPGYASYCASKF  157 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc----CCCCccHHHHHHH
Confidence            99999999754211   1112234466799999999998662     2456899999876643    2233455766654


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .     +.+...+...|++++++.||.+ .++....    .    . . .  ..  ......+.+++|+|+++++++++.
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~-~t~~~~~----~----~-~-~--~~--~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRAT-RTAMNSE----A----V-Q-A--LN--RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcc-cccchhh----h----c-c-c--cc--ccccCCCCCHHHHHHHHHHHHhCC
Confidence            2     2222333456899999999955 4332110    0    0 0 0  00  001124678999999999999875

>TIGR02415 23BDH acetoin reductases

Probab=99.81  E-value=1.2e-19  Score=159.37  Aligned_cols=219  Identities=14%  Similarity=0.106  Sum_probs=141.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      |+++||||+|+||.+++++|++.|++|+++.|+.+..+.+....  .+.++.++.+|++|++++. +++       ..+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~-~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVF-SAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHHcCCCC
Confidence            47999999999999999999999999999999876554433211  1446788999999999887 443       3689


Q ss_pred             EEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----CC-C-CCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       154 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +||||+|.....   ....+..+..+++|+.+.+.+++++    +. + .++||++||.....    +......|+.+|.
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~  155 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE----GNPILSAYSSTKF  155 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC----CCCCCcchHHHHH
Confidence            999999975321   1112223346788999998887754    22 2 36999999976644    2233455665553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce------eecCCCCcccccccHHHHHHHHH
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA------VLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .     +.+...+...|+++++++||.+ +++...    .+..........      ..+........+.+++|+++++.
T Consensus       156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i-~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  230 (254)
T TIGR02415       156 AVRGLTQTAAQELAPKGITVNAYCPGIV-KTPMWE----EIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVS  230 (254)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcc-cChhhh----hhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHH
Confidence            2     2222233445899999999954 444311    111100000000      00001122345889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.+.  ..|+.+.+++|
T Consensus       231 ~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       231 FLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             hhcccccCCccCcEEEecCC
Confidence            9999764  34788888875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.81  E-value=1.2e-19  Score=165.30  Aligned_cols=168  Identities=15%  Similarity=0.190  Sum_probs=118.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ...+++|+||||+|+||++++++|+++|++|++++|+.++.+......  ...++.++.+|++|.++++ ++++      
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~   81 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVR-RFVDDFRALG   81 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHH-HHHHHHHHhC
Confidence            456789999999999999999999999999999999987765543322  1346888999999998887 5443      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcC-----CC--CCeEEEEeccccccCC---------
Q 019935          151 -GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SS--LKRIVLVSSVGVTKFN---------  209 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~--~~~~v~~SS~~~~~~~---------  209 (333)
                       ++|+||||||.....    ....+..+..+++|+.|++++++++.     .+  .+|||++||...+...         
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence             589999999975321    11223345578899999999988652     22  3699999997654210         


Q ss_pred             ----------------------CCCccchhhhHHHHHH--HHHHHHHH----hcCCCEEEEEcccc
Q 019935          210 ----------------------ELPWSIMNLFGVLKYK--KMGEDFVQ----KSGLPFTIIRAGRL  247 (333)
Q Consensus       210 ----------------------~~~~~~~~~~~~~k~k--~~~e~~l~----~~gi~~~~vrpg~~  247 (333)
                                            ..++.+...|+.+|..  ..++.+.+    ..|+++++++||.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  227 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCV  227 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcc
Confidence                                  0123344567777642  11222222    35899999999966

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.81  E-value=3e-19  Score=156.21  Aligned_cols=215  Identities=15%  Similarity=0.065  Sum_probs=137.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +++|||||+|+||++++++|+++|++|+++ .|+.++.++......  +.++.++.+|++|+++++ ++++       ++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~-~~~~~~~~~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVV-AMFTAIDQHDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHH-HHHHHHHHhCCCC
Confidence            689999999999999999999999999874 566655443322111  345788999999998887 5443       57


Q ss_pred             cEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-C----C---CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-P----S---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-~----~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      |+||||+|......    ..++.....+++|+.++.++++++ +    .   ..++||++||...+....   .....|+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~---~~~~~Y~  157 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP---GEYVDYA  157 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC---CcccchH
Confidence            99999999753211    111122346788999998888754 1    1   135799999987654211   1112466


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|..     +.+...+.+.|++++++|||.+ +++.... ....+.......         .....+.+++|+|+++++
T Consensus       158 ~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~  227 (247)
T PRK09730        158 ASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFI-YTEMHASGGEPGRVDRVKSN---------IPMQRGGQPEEVAQAIVW  227 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCC-cCcccccCCCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHh
Confidence            55532     1222233456999999999955 6764321 111111111111         111234578999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.++.  ..|+.+.+.+|
T Consensus       228 ~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        228 LLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             hcChhhcCccCcEEecCCC
Confidence            998643  44788888874

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-19  Score=158.29  Aligned_cols=212  Identities=19%  Similarity=0.226  Sum_probs=135.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccCCCCceEEEEccCCCcCCCchhhhcC---------C
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG---------V  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~---------~  152 (333)
                      |+++||||+|+||++++++|+++|++|++++|++ +....+.... ..+++++.+|++|+++++ ++++.         .
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~~~~   79 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELE-TNFNEILSSIQEDNV   79 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHH-HHHHHHHHhcCcccC
Confidence            6899999999999999999999999999999987 3333332221 457889999999998887 55532         1


Q ss_pred             --cEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc----CC--CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          153 --THVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       153 --d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        +++|||||.....    ...++.....+++|+.+...+++++    +.  +.++||++||..+..    +......|+
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~  155 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN----PYFGWSAYC  155 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC----CCCCcHHHh
Confidence              2899999875321    1112223345777888877777644    22  346899999987754    555566777


Q ss_pred             HHHHHHHHHHHH---------HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccccee---ecCCCCcccccccHHHH
Q 019935          221 VLKYKKMGEDFV---------QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAV---LMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       221 ~~k~k~~~e~~l---------~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dv  288 (333)
                      .+|..  ++.+.         +..+++++.|+||.+ .++....     ..... .....   .+-.......+.+++|+
T Consensus       156 ~sKaa--~~~~~~~la~e~~~~~~~i~v~~v~Pg~v-~t~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dv  226 (251)
T PRK06924        156 SSKAG--LDMFTQTVATEQEEEEYPVKIVAFSPGVM-DTNMQAQ-----IRSSS-KEDFTNLDRFITLKEEGKLLSPEYV  226 (251)
T ss_pred             HHHHH--HHHHHHHHHHHhhhcCCCeEEEEecCCcc-ccHhHHH-----HHhcC-cccchHHHHHHHHhhcCCcCCHHHH
Confidence            66642  22211         235899999999955 3332110     00000 00000   00000112347899999


Q ss_pred             HHHHHHhccC-cccCCcEEEec
Q 019935          289 AEACIQALDI-EFTEGEIYEIN  309 (333)
Q Consensus       289 a~a~~~~l~~-~~~~g~~~~v~  309 (333)
                      |+.+++++.+ ....|+.+.+.
T Consensus       227 a~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        227 AKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             HHHHHHHHhcccCCCCCEeehh
Confidence            9999999987 33447666655

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.81  E-value=5e-19  Score=153.91  Aligned_cols=212  Identities=18%  Similarity=0.112  Sum_probs=139.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      |||||++|+||++++++|+++|++|++++|+. +..+......  .+.++.++.+|++|+++++ +++       ..+|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVK-AVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999875 2222221111  1345788999999999877 544       35799


Q ss_pred             EEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||++|.....   ....+..+..+++|+.++.++++++.     .+.++||++||.+.+.    .......|+.+|.. 
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----g~~~~~~y~~~k~a~  155 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM----GNAGQANYAASKAGV  155 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC----CCCCCchhHHHHHHH
Confidence            99999975321   11112234467789999999998662     3567999999976543    12233456655532 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                          +.+...+...|+++++++||.+ .++........+......         ......+.+++|+|++++.++.... 
T Consensus       156 ~~~~~~l~~~~~~~g~~~~~i~pg~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~~~~~~~  225 (239)
T TIGR01830       156 IGFTKSLAKELASRNITVNAVAPGFI-DTDMTDKLSEKVKKKILS---------QIPLGRFGTPEEVANAVAFLASDEAS  225 (239)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEECCC-CChhhhhcChHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHhCcccC
Confidence                2222334456999999999955 444322111111111111         1123357789999999999996543 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|++|++++|
T Consensus       226 ~~~g~~~~~~~g  237 (239)
T TIGR01830       226 YITGQVIHVDGG  237 (239)
T ss_pred             CcCCCEEEeCCC
Confidence             45889999764

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.4e-19  Score=158.14  Aligned_cols=219  Identities=12%  Similarity=0.034  Sum_probs=136.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----------hhhhhhccCC--CCceEEEEccCCCcCCCc
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----------KATTLFGKQD--EETLQVCKGDTRNPKDLD  145 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----------~~~~~~~~~~--~~~~~~v~~D~~d~~~~~  145 (333)
                      .++.+|+++||||+++||++++++|++.|++|++++|+..          +.+...+...  +.++.++.+|++|+++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            3456789999999999999999999999999999999742          2222221111  345778999999998887


Q ss_pred             hhh-------hcCCcEEEEcC-CCCCC-----CC--CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEecccc
Q 019935          146 PAI-------FEGVTHVICCT-GTTAF-----PS--RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGV  205 (333)
Q Consensus       146 ~~~-------~~~~d~vi~~a-~~~~~-----~~--~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~  205 (333)
                       ++       +.++|++|||| |....     +.  ...+.....+++|+.+.+.+++++    + .+.++||++||...
T Consensus        84 -~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         84 -ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             -HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence             33       34789999999 64211     00  111222335678999999988855    2 23469999999654


Q ss_pred             ccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-cccce-eecCCCCc
Q 019935          206 TKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-GERRA-VLMGQGDK  278 (333)
Q Consensus       206 ~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~  278 (333)
                      ..... +......|+.+|+     .+.+...+...||+++.|.||.+ ..+..       ..... ..... .... ...
T Consensus       163 ~~~~~-~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v-~T~~~-------~~~~~~~~~~~~~~~~-~~p  232 (305)
T PRK08303        163 EYNAT-HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWL-RSEMM-------LDAFGVTEENWRDALA-KEP  232 (305)
T ss_pred             cccCc-CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcc-ccHHH-------HHhhccCccchhhhhc-ccc
Confidence            21110 1122334665553     34455566778999999999955 43321       00000 00000 0000 011


Q ss_pred             -ccccccHHHHHHHHHHhccCcc---cCCcEEE
Q 019935          279 -LIGEVSRIVVAEACIQALDIEF---TEGEIYE  307 (333)
Q Consensus       279 -~~~~i~v~Dva~a~~~~l~~~~---~~g~~~~  307 (333)
                       ...+..++|+|+++++++.++.   ..|+.+.
T Consensus       233 ~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        233 HFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             ccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence             2345689999999999998753   3465544

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.4e-19  Score=153.92  Aligned_cols=193  Identities=15%  Similarity=0.169  Sum_probs=132.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhh-------hc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      +++++||||+|+||++++++|+++|++|++++|++++.+.+....    ...+++++.+|++|++++. ++       +.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   80 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVF-EVFAEFRDELG   80 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            578999999999999999999999999999999987665443211    1446888999999998776 33       34


Q ss_pred             CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||.......   .++.....+++|+.+..++++++     +.+.++||++||........   .+...|+.+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~~Y~~s  157 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP---GVKAAYAAS  157 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC---CCcccHHHH
Confidence            79999999997542211   11222345778999999988865     23667999999987643111   123456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     ......+...++++++++||.+ .++....           .      +.   ....++++|.|++++++++
T Consensus       158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v-~t~~~~~-----------~------~~---~~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        158 KAGVASLGEGLRAELAKTPIKVSTIEPGYI-RSEMNAK-----------A------KS---TPFMVDTETGVKALVKAIE  216 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcC-cchhhhc-----------c------cc---CCccCCHHHHHHHHHHHHh
Confidence            542     1122223345899999999955 4332110           0      00   1135789999999999998


Q ss_pred             Cc
Q 019935          298 IE  299 (333)
Q Consensus       298 ~~  299 (333)
                      ..
T Consensus       217 ~~  218 (248)
T PRK08251        217 KE  218 (248)
T ss_pred             cC
Confidence            64

>PRK06484 short chain dehydrogenase; Validated

Probab=99.80  E-value=6.8e-19  Score=170.54  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=147.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      .++|++|||||+++||+++++.|+++|++|++++|+.++.+.+.... ..++.++.+|++|+++++ +++       .++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVSDEAQIR-EGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccCCHHHHH-HHHHHHHHHhCCC
Confidence            35689999999999999999999999999999999987766554433 446778999999998877 443       468


Q ss_pred             cEEEEcCCCCCC-----CCCCCCCCCCCcchhHHHHHHHHHhcC-----CCC-CeEEEEeccccccCCCCCccchhhhHH
Q 019935          153 THVICCTGTTAF-----PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      |+||||||....     .....++....+++|+.+++++++++.     .+. .+||++||.....    +......|+.
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~----~~~~~~~Y~a  156 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV----ALPKRTAYSA  156 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC----CCCCCchHHH
Confidence            999999997321     112223345578899999999998662     233 3999999987754    3334455665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|++++.|+||.+ .++........      ................+..++|+|+++++++
T Consensus       157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v-~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~  229 (520)
T PRK06484        157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYV-RTQMVAELERA------GKLDPSAVRSRIPLGRLGRPEEIAEAVFFLA  229 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCc-Cchhhhhhccc------chhhhHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            554     23344555667999999999954 44432110000      0000000000011224678999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .+..  ..|+.+.+.+|
T Consensus       230 ~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        230 SDQASYITGSTLVVDGG  246 (520)
T ss_pred             CccccCccCceEEecCC
Confidence            8643  44777777664

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.80  E-value=1.2e-18  Score=154.42  Aligned_cols=214  Identities=13%  Similarity=0.065  Sum_probs=138.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhhccC---CCCceEEEEccCCCcCCCch---h-------h
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQ---DEETLQVCKGDTRNPKDLDP---A-------I  148 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~---~-------~  148 (333)
                      ++++||||+|+||+++++.|+++|++|+++.|+ ++..+.+....   ...++.++.+|++|++++.+   +       .
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            479999999999999999999999999998764 44443332221   13456678999999886531   2       2


Q ss_pred             hcCCcEEEEcCCCCCCCCC---CCCC-----------CCCCcchhHHHHHHHHHhcC-----C------CCCeEEEEecc
Q 019935          149 FEGVTHVICCTGTTAFPSR---RWDG-----------DNTPEKVDWEGVRNLVSALP-----S------SLKRIVLVSSV  203 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~~---~~~~-----------~~~~~~~n~~~~~~l~~a~~-----~------~~~~~v~~SS~  203 (333)
                      +.++|+||||||.......   ...+           ....+++|+.+.+.+++++.     .      ...++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            3579999999997532110   1110           12357889999999988641     1      12478888887


Q ss_pred             ccccCCCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCc
Q 019935          204 GVTKFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDK  278 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (333)
                      ....    +......|+.+|..     +.+...+...|+++++|+||.+ ..+...  ...........     ..   .
T Consensus       162 ~~~~----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~-~~~~~~--~~~~~~~~~~~-----~~---~  226 (267)
T TIGR02685       162 MTDQ----PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLS-LLPDAM--PFEVQEDYRRK-----VP---L  226 (267)
T ss_pred             hccC----CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCc-cCcccc--chhHHHHHHHh-----CC---C
Confidence            6643    44555667766642     2333444567999999999955 333211  01111111100     00   0


Q ss_pred             ccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          279 LIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       279 ~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ...+..++|+|+++++++.+..  ..|+.+.+.+|
T Consensus       227 ~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg  261 (267)
T TIGR02685       227 GQREASAEQIADVVIFLVSPKAKYITGTCIKVDGG  261 (267)
T ss_pred             CcCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence            1245789999999999998753  45888999876

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.5e-19  Score=152.46  Aligned_cols=207  Identities=19%  Similarity=0.190  Sum_probs=134.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCc--CCCch------h
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNP--KDLDP------A  147 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~--~~~~~------~  147 (333)
                      .+++++++||||+|+||++++++|+++|++|++++|++++.+......   ....+.++.+|++|.  +++.+      .
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999987665443221   133567788999763  23331      1


Q ss_pred             hh-cCCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchh
Q 019935          148 IF-EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       148 ~~-~~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                      .+ ..+|+||||||....  +  ...++.....+++|+.+..++++++    + .+.+++|++||.....    +.....
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~  158 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET----PKAYWG  158 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc----CCCCcc
Confidence            12 568999999996421  1  1112222335789999999988866    2 2457999999976543    333334


Q ss_pred             hhHHHHHH-----HHHHHHHHhc-CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKS-GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~-gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .|+.+|..     +.+...+... ++++++|+||.+ +++.....               .  .+.....+...+|++.+
T Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v-~t~~~~~~---------------~--~~~~~~~~~~~~~~~~~  220 (239)
T PRK08703        159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPI-NSPQRIKS---------------H--PGEAKSERKSYGDVLPA  220 (239)
T ss_pred             chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcc-cCcccccc---------------C--CCCCccccCCHHHHHHH
Confidence            56655532     1112222223 699999999955 65542110               0  01112356789999999


Q ss_pred             HHHhccCcc--cCCcEEE
Q 019935          292 CIQALDIEF--TEGEIYE  307 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~  307 (333)
                      +++++....  ..|+++.
T Consensus       221 ~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        221 FVWWASAESKGRSGEIVY  238 (239)
T ss_pred             HHHHhCccccCcCCeEee
Confidence            999998532  4455543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1e-18  Score=152.63  Aligned_cols=187  Identities=14%  Similarity=0.131  Sum_probs=126.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+++++++||||+|+||+++++.|+++|++|++++|+.........   ......+.+|++|.+++. +.+.++|++|||
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~-~~~~~iDilVnn   86 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND---ESPNEWIKWECGKEESLD-KQLASLDVLILN   86 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc---cCCCeEEEeeCCCHHHHH-HhcCCCCEEEEC
Confidence            4567899999999999999999999999999999998632211111   112367889999999888 788899999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC----C----CCCeEEEEeccccccCCCCCccchhhhHHHHHHH----
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP----S----SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK----  226 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~----~----~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~----  226 (333)
                      ||.........++....+++|+.++.++++++.    .    +.+.++..||.+...    + .....|+.+|...    
T Consensus        87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~----~-~~~~~Y~aSKaal~~~~  161 (245)
T PRK12367         87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ----P-ALSPSYEISKRLIGQLV  161 (245)
T ss_pred             CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC----C-CCCchhHHHHHHHHHHH
Confidence            997543222233445678999999999999651    1    122344445544432    1 1234577666531    


Q ss_pred             HHHH----HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          227 MGED----FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       227 ~~e~----~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .+.+    .+.+.++.++.+.||.+ ..+.                     .   . ...++++|+|+.+++++.+..
T Consensus       162 ~l~~~l~~e~~~~~i~v~~~~pg~~-~t~~---------------------~---~-~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        162 SLKKNLLDKNERKKLIIRKLILGPF-RSEL---------------------N---P-IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             HHHHHHHHhhcccccEEEEecCCCc-cccc---------------------C---c-cCCCCHHHHHHHHHHHHhcCC
Confidence            1112    22346888999999854 2211                     0   0 125789999999999998753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.79  E-value=9.5e-19  Score=156.75  Aligned_cols=219  Identities=11%  Similarity=0.045  Sum_probs=140.7

Q ss_pred             CCCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-----------C----CceEEEEccC--
Q 019935           78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------E----ETLQVCKGDT--  138 (333)
Q Consensus        78 ~~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-----------~----~~~~~v~~D~--  138 (333)
                      +++++|++|||||  +++||+++++.|+++|++|++ .|+.++.+.+.....           .    ....++.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4578999999999  899999999999999999988 666554433321110           1    1146788899  


Q ss_pred             CCcC------------------CCch------hhhcCCcEEEEcCCCCC-----CCCCCCCCCCCCcchhHHHHHHHHHh
Q 019935          139 RNPK------------------DLDP------AIFEGVTHVICCTGTTA-----FPSRRWDGDNTPEKVDWEGVRNLVSA  189 (333)
Q Consensus       139 ~d~~------------------~~~~------~~~~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a  189 (333)
                      ++++                  ++++      +.+.++|+||||||...     +.+..+++....+++|+.+.+.++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            5555                  3331      12347899999997532     11223344556789999999999986


Q ss_pred             c----CCCCCeEEEEeccccccCCCCCccch-hhhHHHHH-----HHHHHHHHHh-cCCCEEEEEcccccCCCCCCcc--
Q 019935          190 L----PSSLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYD--  256 (333)
Q Consensus       190 ~----~~~~~~~v~~SS~~~~~~~~~~~~~~-~~~~~~k~-----k~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~--  256 (333)
                      +    +.+ ++||++||.....    +.+.. ..|+.+|+     .+.+..++.. .|++++.|.||.+ ..+.....  
T Consensus       164 ~~p~m~~~-G~II~isS~a~~~----~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v-~T~~~~~~~~  237 (303)
T PLN02730        164 FGPIMNPG-GASISLTYIASER----IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPL-GSRAAKAIGF  237 (303)
T ss_pred             HHHHHhcC-CEEEEEechhhcC----CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCc-cCchhhcccc
Confidence            5    223 7999999987654    22211 24665553     3444455554 6999999999955 44432110  


Q ss_pred             hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          257 LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      .+......         ........+..++|+|.+++++++...  ..|+.+.+.+|-
T Consensus       238 ~~~~~~~~---------~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        238 IDDMIEYS---------YANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             cHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            01110000         011122356789999999999998643  458888888763

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.9e-19  Score=153.36  Aligned_cols=202  Identities=17%  Similarity=0.109  Sum_probs=130.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----------cC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----------EG  151 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----------~~  151 (333)
                      +++|||||+|+||++++++|+++|++|++++|+.++..  ... .+.++.++.+|++|.++++ +.+           ..
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAA-AGERLAEVELDLSDAAAAA-AWLAGDLLAAFVDGAS   77 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhc-cCCeEEEEEeccCCHHHHH-HHHHHHHHHHhccCCC
Confidence            58999999999999999999999999999999865422  111 1456888999999998887 422           15


Q ss_pred             CcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|++|||+|.....    ....+.....+++|+.+...+++++    + .+.++||++||..++.    +..+...|+.+
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~s  153 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN----AYAGWSVYCAT  153 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC----CCCCchHHHHH
Confidence            79999999975421    1112233567889999977776644    2 2457999999998765    44455567755


Q ss_pred             HHHHHHHHHHH------hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc--cceeecCCCCcccccccHHHHHHHHHH
Q 019935          223 KYKKMGEDFVQ------KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE--RRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       223 k~k~~~e~~l~------~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |  ..++.+.+      ..|+++++|+||.+ .++...    . .......  .....+........++.++|+|+.++.
T Consensus       154 K--~a~~~~~~~~~~~~~~~i~v~~v~pg~~-~t~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  225 (243)
T PRK07023        154 K--AALDHHARAVALDANRALRIVSLAPGVV-DTGMQA----T-IRATDEERFPMRERFRELKASGALSTPEDAARRLIA  225 (243)
T ss_pred             H--HHHHHHHHHHHhcCCCCcEEEEecCCcc-ccHHHH----H-HHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence            5  33443332      35899999999954 443210    0 0000000  000000000112357889999997777


Q ss_pred             hccCcc
Q 019935          295 ALDIEF  300 (333)
Q Consensus       295 ~l~~~~  300 (333)
                      .+..+.
T Consensus       226 ~l~~~~  231 (243)
T PRK07023        226 YLLSDD  231 (243)
T ss_pred             HHhccc
Confidence            776654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-18  Score=154.84  Aligned_cols=208  Identities=13%  Similarity=0.116  Sum_probs=133.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      |+++||||+|+||++++++|+++|++|++++|+.++.+.......   .....++.+|++|+++++ +++       .++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVA-AFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHH-HHHHHHHHhcCCC
Confidence            479999999999999999999999999999998766544322111   223456789999988776 333       368


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |+||||+|.....   +..++.....+++|+.+..++++++     +. ..++||++||.....    +......|+.+|
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~sK  155 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV----ALPWHAAYSASK  155 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC----CCCCCcchHHHH
Confidence            9999999975321   1122233456789999999999975     22 246999999987643    222334566555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     ...+..++...|+++++|+||.+ .++...........  ........+. .......++++|+|+++++++..
T Consensus       156 ~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        156 FGLRGLSEVLRFDLARHGIGVSVVVPGAV-KTPLVNTVEIAGVD--REDPRVQKWV-DRFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcc-cCcchhcccccccC--cchhhHHHHH-HhcccCCCCHHHHHHHHHHHHhc
Confidence            3     23334445567999999999955 55532110000000  0000000000 01123468999999999999975


Q ss_pred             c
Q 019935          299 E  299 (333)
Q Consensus       299 ~  299 (333)
                      .
T Consensus       232 ~  232 (272)
T PRK07832        232 N  232 (272)
T ss_pred             C
Confidence            3

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.1e-19  Score=148.62  Aligned_cols=184  Identities=21%  Similarity=0.231  Sum_probs=128.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~vi~~a  159 (333)
                      |+++||||+|+||+++++.|+++ ++|++++|+..               .+.+|++|+++++ ++++   ++|+|||||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~-~~~~~~~~id~lv~~a   63 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIR-ALFEKVGKVDAVVSAA   63 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHH-HHHHhcCCCCEEEECC
Confidence            37999999999999999999999 99999998742               3578999999887 5554   789999999


Q ss_pred             CCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHHH-----HHH
Q 019935          160 GTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----KMG  228 (333)
Q Consensus       160 ~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-----~~~  228 (333)
                      |......   ..+++....+++|+.+..++++++..   ...+|+++||.....    +......|+.+|..     +.+
T Consensus        64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~~~~~l  139 (199)
T PRK07578         64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE----PIPGGASAATVNGALEGFVKAA  139 (199)
T ss_pred             CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC----CCCCchHHHHHHHHHHHHHHHH
Confidence            9753211   11222334567899999999986622   336899999987653    34455567766642     222


Q ss_pred             HHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEe
Q 019935          229 EDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI  308 (333)
Q Consensus       229 e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v  308 (333)
                      ...+ +.|++++.|+||.+ ..+.     ..+      ..   .+    ....+++++|+|++++.+++.. ..|++|++
T Consensus       140 a~e~-~~gi~v~~i~Pg~v-~t~~-----~~~------~~---~~----~~~~~~~~~~~a~~~~~~~~~~-~~g~~~~~  198 (199)
T PRK07578        140 ALEL-PRGIRINVVSPTVL-TESL-----EKY------GP---FF----PGFEPVPAARVALAYVRSVEGA-QTGEVYKV  198 (199)
T ss_pred             HHHc-cCCeEEEEEcCCcc-cCch-----hhh------hh---cC----CCCCCCCHHHHHHHHHHHhccc-eeeEEecc
Confidence            2233 56999999999965 3221     110      00   01    1124689999999999999864 45777765

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.79  E-value=1.2e-18  Score=158.22  Aligned_cols=195  Identities=16%  Similarity=0.117  Sum_probs=132.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCc--CCCch--hhhcC-
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNP--KDLDP--AIFEG-  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~--~~~~~--~~~~~-  151 (333)
                      .++.++||||+|+||++++++|+++|++|++++|++++.+++..+..    ..++..+.+|+++.  +.+++  +.+++ 
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999887765543221    23567788999851  22220  23343 


Q ss_pred             -CcEEEEcCCCCCCC-----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          152 -VTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       152 -~d~vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       +|++|||||.....     +..++.....+++|+.|+.++++++     +++.++||++||.+++...  +.+....|+
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~p~~~~Y~  209 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--SDPLYAVYA  209 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--CCccchHHH
Confidence             56999999975311     1122233457889999999999865     2356799999998875311  122345677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +.+..+++..|+++++|+||.+ .++....           .       ..  .....+++++|+.+++.
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v-~T~~~~~-----------~-------~~--~~~~~~p~~~A~~~~~~  268 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYV-ATKMASI-----------R-------RS--SFLVPSSDGYARAALRW  268 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCce-ecCcccc-----------c-------CC--CCCCCCHHHHHHHHHHH
Confidence            66642     3444556677999999999955 4332110           0       00  01145899999999999


Q ss_pred             ccC
Q 019935          296 LDI  298 (333)
Q Consensus       296 l~~  298 (333)
                      +..
T Consensus       269 ~~~  271 (320)
T PLN02780        269 VGY  271 (320)
T ss_pred             hCC
Confidence            964

>PRK05855 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.2e-18  Score=170.95  Aligned_cols=214  Identities=16%  Similarity=0.084  Sum_probs=141.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ...++++|||||+|+||++++++|+++|++|++++|+.++.+++.....  +.++.++.+|++|++++. ++++      
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~  390 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAME-AFAEWVRAEH  390 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHhc
Confidence            3456799999999999999999999999999999999876655432221  446889999999999887 4443      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       ++|+||||||......   ...+.....+++|+.|+.++++++     +++ .++||++||.+++.    +......|+
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~  466 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA----PSRSLPAYA  466 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc----CCCCCcHHH
Confidence             5899999999864211   112233456779999999999865     223 36999999999876    444556677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|..     +.+...+.+.|+++++|+||.+ .++..... +............ ... ........+.++|+|+++++
T Consensus       467 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~p~~va~~~~~  543 (582)
T PRK05855        467 TSKAAVLMLSECLRAELAAAGIGVTAICPGFV-DTNIVATTRFAGADAEDEARRR-GRA-DKLYQRRGYGPEKVAKAIVD  543 (582)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCCC-cccchhccccCCcccchhhhHH-hhh-hhhccccCCCHHHHHHHHHH
Confidence            66642     2333445567999999999954 54432110 0000000000000 000 00001123578999999999


Q ss_pred             hccCcc
Q 019935          295 ALDIEF  300 (333)
Q Consensus       295 ~l~~~~  300 (333)
                      ++..+.
T Consensus       544 ~~~~~~  549 (582)
T PRK05855        544 AVKRNK  549 (582)
T ss_pred             HHHcCC
Confidence            998753

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-18  Score=173.29  Aligned_cols=196  Identities=18%  Similarity=0.233  Sum_probs=139.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+++..+++....  .+.++.++.+|++|+++++ ++++      
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVD-HTVKDILAEH  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHhc
Confidence            456789999999999999999999999999999999987765543221  1456888999999999887 5543      


Q ss_pred             -CCcEEEEcCCCCCCCCC--C---CCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 -GVTHVICCTGTTAFPSR--R---WDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~~--~---~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       ++|+||||||.......  .   +++....+++|+.++.++++++    + .+.++||++||.+++.    +......|
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  522 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT----NAPRFSAY  522 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC----CCCCcchH
Confidence             68999999997531110  0   1223456789999999988754    2 3567999999998876    33344567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ .++....           ..   .+    ....+++++++|+.++.
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v-~T~~~~~-----------~~---~~----~~~~~~~~~~~a~~i~~  583 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLV-RTPMIAP-----------TK---RY----NNVPTISPEEAADMVVR  583 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcC-cccccCc-----------cc---cc----cCCCCCCHHHHHHHHHH
Confidence            766532     2333444567999999999955 5443211           00   00    11246789999999999


Q ss_pred             hccC
Q 019935          295 ALDI  298 (333)
Q Consensus       295 ~l~~  298 (333)
                      .+..
T Consensus       584 ~~~~  587 (657)
T PRK07201        584 AIVE  587 (657)
T ss_pred             HHHh
Confidence            8865

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.78  E-value=4.8e-18  Score=154.04  Aligned_cols=220  Identities=15%  Similarity=0.127  Sum_probs=137.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++++++||||+++||.++++.|+++| ++|++++|+.++.+.+.....  ...+.++.+|++|.++++ +++       .
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVR-QFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHH-HHHHHHHHhCC
Confidence            46799999999999999999999999 999999998876655433221  345788899999998877 333       4


Q ss_pred             CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc----CC-C--CCeEEEEeccccccCC----------
Q 019935          151 GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVTKFN----------  209 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~--~~~~v~~SS~~~~~~~----------  209 (333)
                      ++|++|||||.....    ....+.....+++|+.+.+.+++++    +. +  .++||++||...+...          
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            699999999974311    1112233446789999999988754    22 2  4699999999765310          


Q ss_pred             -------------------CCCccchhhhHHHHHH-----HHHHHHHH-hcCCCEEEEEcccccCCCCCCcchHHHHHHh
Q 019935          210 -------------------ELPWSIMNLFGVLKYK-----KMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT  264 (333)
Q Consensus       210 -------------------~~~~~~~~~~~~~k~k-----~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~  264 (333)
                                         ..++.+...|+.+|..     +.+.+.+. ..|++++.|+||.+...+.............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                               0112234456666643     11122222 2589999999996532332211111110000


Q ss_pred             hcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEe
Q 019935          265 AGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEI  308 (333)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v  308 (333)
                      .......       ...+.++++.|+.++.++..+.  ..|..|..
T Consensus       241 ~~~~~~~-------~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~  279 (314)
T TIGR01289       241 PPFQKYI-------TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSW  279 (314)
T ss_pred             HHHHHHH-------hccccchhhhhhhhHHhhcCcccCCCceeeec
Confidence            0000000       1125788999999999887644  23544443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.3e-18  Score=156.07  Aligned_cols=173  Identities=18%  Similarity=0.179  Sum_probs=121.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc----CCCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +.++++++++||||+|+||++++++|+++|++|++++|+.++.++....    ....++.++.+|++|.++++ +++   
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~-~~~~~~   87 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVA-ALGEQL   87 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHH-HHHHHH
Confidence            3456789999999999999999999999999999999998765543321    12346889999999998887 443   


Q ss_pred             ----cCCcEEEEcCCCCCCCC--CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCC--------CC
Q 019935          150 ----EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN--------EL  211 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~--------~~  211 (333)
                          .++|+||||||....+.  ...+..+..+++|+.+.+.+++.+    +.+.++||++||...+...        ..
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence                36899999999865322  233445567899999999888755    3345699999998764311        11


Q ss_pred             CccchhhhHHHHHHH--HHHHHH-----HhcCCCEEEEEcccccCCC
Q 019935          212 PWSIMNLFGVLKYKK--MGEDFV-----QKSGLPFTIIRAGRLTDGP  251 (333)
Q Consensus       212 ~~~~~~~~~~~k~k~--~~e~~l-----~~~gi~~~~vrpg~~~~g~  251 (333)
                      ++.+...|+.+|...  .+..+.     ...|++++.+.||.+ ...
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v-~T~  213 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVA-PTN  213 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEeccee-ccC
Confidence            234455677666421  111111     135799999999955 443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.78  E-value=3.1e-18  Score=150.88  Aligned_cols=205  Identities=16%  Similarity=0.087  Sum_probs=132.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHh----CCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .++||||+++||.+++++|++    .|++|+++.|+.++.+.+...+    ...++.++.+|++|+++++ ++++     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~-~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLE-QLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHH-HHHHHHHhc
Confidence            689999999999999999997    7999999999987765543322    1346788999999998877 4432     


Q ss_pred             ------CCcEEEEcCCCCCCCC---C---CCCCCCCCcchhHHHHHHHHHhc----CC--C-CCeEEEEeccccccCCCC
Q 019935          151 ------GVTHVICCTGTTAFPS---R---RWDGDNTPEKVDWEGVRNLVSAL----PS--S-LKRIVLVSSVGVTKFNEL  211 (333)
Q Consensus       151 ------~~d~vi~~a~~~~~~~---~---~~~~~~~~~~~n~~~~~~l~~a~----~~--~-~~~~v~~SS~~~~~~~~~  211 (333)
                            +.|+||||||......   .   ..+.....+++|+.+...+++++    +.  + .++||++||.+...    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence                  1269999999743111   1   11223457889999998888754    22  2 35899999988754    


Q ss_pred             CccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHH
Q 019935          212 PWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRI  286 (333)
Q Consensus       212 ~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  286 (333)
                      +......|+.+|.-     +.+...+...|++++.++||.+ ..+...    .+............+........+..++
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v-~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~  231 (256)
T TIGR01500       157 PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVL-DTDMQQ----QVREESVDPDMRKGLQELKAKGKLVDPK  231 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcc-cchHHH----HHHHhcCChhHHHHHHHHHhcCCCCCHH
Confidence            44444567665542     2233344557899999999955 443211    0100000000000000111233578999


Q ss_pred             HHHHHHHHhccC
Q 019935          287 VVAEACIQALDI  298 (333)
Q Consensus       287 Dva~a~~~~l~~  298 (333)
                      |+|+++++++++
T Consensus       232 eva~~~~~l~~~  243 (256)
T TIGR01500       232 VSAQKLLSLLEK  243 (256)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.78  E-value=3.1e-18  Score=147.73  Aligned_cols=206  Identities=14%  Similarity=0.071  Sum_probs=145.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCch------hhh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDP------AIF  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~------~~~  149 (333)
                      ..+..+++||||||++++|+.++.+++++|..+++.+.+.+...+..+.... .+++...+|++|.+++.+      +-+
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            4466788999999999999999999999999999999988766554433321 368899999999887763      234


Q ss_pred             cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccC-CCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF-NELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~-~~~~~~~~~~~~  220 (333)
                      +.+|++|||||+....   +.+.+.-+..+++|+.|.+..+++.     +.+-++||.++|+.+.-. .....+..+++|
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a  192 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFA  192 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHH
Confidence            5899999999997632   1222334567899999999999876     235679999999987641 112223344444


Q ss_pred             HHHHHHHHHHHHHhc---CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          221 VLKYKKMGEDFVQKS---GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       221 ~~k~k~~~e~~l~~~---gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      ....+..+..+++..   |++.+.++|+.+ ....-.            +     -..-....+.+.++.+|+-+++++.
T Consensus       193 ~vGfhesL~~EL~~~~~~~IktTlv~P~~i-~Tgmf~------------~-----~~~~~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  193 AVGFHESLSMELRALGKDGIKTTLVCPYFI-NTGMFD------------G-----ATPFPTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeEEEEeeeec-cccccC------------C-----CCCCccccCCCCHHHHHHHHHHHHH
Confidence            444556666666653   789999999954 211100            0     0111344577889999999999998


Q ss_pred             Ccc
Q 019935          298 IEF  300 (333)
Q Consensus       298 ~~~  300 (333)
                      ...
T Consensus       255 ~n~  257 (300)
T KOG1201|consen  255 TNQ  257 (300)
T ss_pred             cCC
Confidence            754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=2.6e-18  Score=149.52  Aligned_cols=213  Identities=15%  Similarity=0.099  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh-------cC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      +++++|+||||+|+||.++++.|+++|++|++++|++++.+.+..... ..+++++.+|++|+++++ +++       .+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~~   81 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESAR-NVIEKAAKVLNA   81 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHH-HHHHHHHHHhCC
Confidence            456899999999999999999999999999999999876655422211 236788999999988876 433       45


Q ss_pred             CcEEEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHHH--
Q 019935          152 VTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k--  225 (333)
                      +|.+||+++...... ...+.....+++|+.+..++++++..   ..++||++||......   +......|+.+|..  
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---~~~~~~~Y~~sK~~~~  158 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK---ASPDQLSYAVAKAGLA  158 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc---CCCCchHHHHHHHHHH
Confidence            799999998643110 11111223457788888887775521   2368999999865321   22333456655532  


Q ss_pred             ---HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--
Q 019935          226 ---KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--  300 (333)
Q Consensus       226 ---~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--  300 (333)
                         +.+...+...|++++++|||++ +++....  ..+ .      .   ..  .....+++++|+++++++++..+.  
T Consensus       159 ~~~~~~~~~~~~~gi~v~~i~pg~v-~~~~~~~--~~~-~------~---~~--~~~~~~~~~~~va~~~~~~~~~~~~~  223 (238)
T PRK05786        159 KAVEILASELLGRGIRVNGIAPTTI-SGDFEPE--RNW-K------K---LR--KLGDDMAPPEDFAKVIIWLLTDEADW  223 (238)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCcc-CCCCCch--hhh-h------h---hc--cccCCCCCHHHHHHHHHHHhcccccC
Confidence               2222334456999999999955 5553210  000 0      0   00  111246888999999999998644  


Q ss_pred             cCCcEEEecCC
Q 019935          301 TEGEIYEINSV  311 (333)
Q Consensus       301 ~~g~~~~v~~g  311 (333)
                      ..|+.+.+.++
T Consensus       224 ~~g~~~~~~~~  234 (238)
T PRK05786        224 VDGVVIPVDGG  234 (238)
T ss_pred             ccCCEEEECCc
Confidence            34788888764

>PRK05599 hypothetical protein; Provisional

Probab=99.77  E-value=4.7e-18  Score=148.82  Aligned_cols=200  Identities=18%  Similarity=0.164  Sum_probs=132.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhh-------hcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-------FEGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~-------~~~~  152 (333)
                      |+++||||+++||.+++++|+ +|++|++++|+.++.+++.+...   ...+.++.+|++|+++++ ++       ++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHR-ELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHH-HHHHHHHHhcCCC
Confidence            479999999999999999998 59999999999877765543221   234788999999998887 43       3478


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |++|||||......   ...+...+..++|+.+..++++++    + .+ -++||++||.....    +......|+.+|
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asK  154 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR----ARRANYVYGSTK  154 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc----CCcCCcchhhHH
Confidence            99999999754211   111111234567888877666543    2 22 46999999987653    222334566555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.+..++...|++++.+.||.+ .++...           +..       ...  -...++|+|+++++++..
T Consensus       155 aa~~~~~~~la~el~~~~I~v~~v~PG~v-~T~~~~-----------~~~-------~~~--~~~~pe~~a~~~~~~~~~  213 (246)
T PRK05599        155 AGLDAFCQGLADSLHGSHVRLIIARPGFV-IGSMTT-----------GMK-------PAP--MSVYPRDVAAAVVSAITS  213 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEecCCcc-cchhhc-----------CCC-------CCC--CCCCHHHHHHHHHHHHhc
Confidence            3     24444556667999999999955 332110           000       000  125799999999999987


Q ss_pred             cccCCcEEEecC
Q 019935          299 EFTEGEIYEINS  310 (333)
Q Consensus       299 ~~~~g~~~~v~~  310 (333)
                      ... +..+.+.+
T Consensus       214 ~~~-~~~~~~~~  224 (246)
T PRK05599        214 SKR-STTLWIPG  224 (246)
T ss_pred             CCC-CceEEeCc
Confidence            543 34555554

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.77  E-value=4.6e-17  Score=129.87  Aligned_cols=200  Identities=16%  Similarity=0.231  Sum_probs=141.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |||.|.||||.+|++|++++.++||+|++++|++++....      .++.+++.|+.|+.++. +.+.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a-~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLA-SDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhH-hhhcCCceEEEeccCC
Confidence            5899999999999999999999999999999999887642      57788999999999998 8999999999988764


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccccc-CC-----CCCccchhhhHHHHH-HHHHHHHHHh
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK-FN-----ELPWSIMNLFGVLKY-KKMGEDFVQK  234 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~-~~-----~~~~~~~~~~~~~k~-k~~~e~~l~~  234 (333)
                      .      .+   ...........|++.++. ++.|++.++..+... ++     +.|..|...++-.+. ...++..-.+
T Consensus        74 ~------~~---~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~  144 (211)
T COG2910          74 A------SD---NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE  144 (211)
T ss_pred             C------CC---hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhc
Confidence            2      11   112233446778888766 899999988776532 22     234444555543322 2233333344


Q ss_pred             cCCCEEEEEcccccCCCC--CCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          235 SGLPFTIIRAGRLTDGPY--TSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                      ..++||.|.|..++ -|+  ++. +      ..++..+..--.|   .++|+.+|.|-+++..++++....+.|.+.
T Consensus       145 ~~l~WTfvSPaa~f-~PGerTg~-y------rlggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~h~rqRftv~  210 (211)
T COG2910         145 KSLDWTFVSPAAFF-EPGERTGN-Y------RLGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQHIRQRFTVA  210 (211)
T ss_pred             cCcceEEeCcHHhc-CCccccCc-e------EeccceEEEcCCC---ceeeeHHHHHHHHHHHHhcccccceeeeec
Confidence            57999999999664 442  221 0      0112222222222   389999999999999999988777777664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=6.2e-18  Score=160.90  Aligned_cols=215  Identities=16%  Similarity=0.108  Sum_probs=143.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ..+++++|||||+|+||+++++.|+++|++|++++|+..  ....+..   ..+..++.+|++|+++++ +++       
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~  282 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN---RVGGTALALDITAPDAPA-RIAEHLAERH  282 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH---HcCCeEEEEeCCCHHHHH-HHHHHHHHhC
Confidence            456789999999999999999999999999999988532  2233322   223467889999988877 443       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-----CCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||......   ...+.....+++|+.++.++++++..     ..++||++||...+.    +......|+.
T Consensus       283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~----g~~~~~~Y~a  358 (450)
T PRK08261        283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA----GNRGQTNYAA  358 (450)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC----CCCCChHHHH
Confidence            36899999999764211   11223344678999999999997632     236899999987653    2234456776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.....++..|+++++|+||.+ ..+.... .+.......  ..      .........++|+|+++++++
T Consensus       359 sKaal~~~~~~la~el~~~gi~v~~v~PG~i-~t~~~~~-~~~~~~~~~--~~------~~~l~~~~~p~dva~~~~~l~  428 (450)
T PRK08261        359 SKAGVIGLVQALAPLLAERGITINAVAPGFI-ETQMTAA-IPFATREAG--RR------MNSLQQGGLPVDVAETIAWLA  428 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEeCcC-cchhhhc-cchhHHHHH--hh------cCCcCCCCCHHHHHHHHHHHh
Confidence            664     23344555678999999999954 4332211 111001000  00      012234466889999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      +...  ..|+++.++++
T Consensus       429 s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        429 SPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             ChhhcCCCCCEEEECCC
Confidence            7643  45889999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=6e-18  Score=148.13  Aligned_cols=204  Identities=15%  Similarity=0.155  Sum_probs=134.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCC--CcCCCch------h
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTR--NPKDLDP------A  147 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~--d~~~~~~------~  147 (333)
                      ..++++|+||||+|+||.+++++|++.|++|++++|+.++.+.+....   ...+++++.+|++  +++++.+      +
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999986654443221   1345777888886  4443331      2


Q ss_pred             hhcCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          148 IFEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      .+..+|+||||||.....    ....+.....+++|+.++.++++++     +.+.++||++||.....    +......
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----~~~~~~~  164 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ----GRANWGA  164 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC----CCCCCcc
Confidence            345789999999875321    1111223446789999999988865     23678999999987654    2233345


Q ss_pred             hHHHHHHHHHHHH-------HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKYKKMGEDF-------VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~k~~~e~~-------l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|.  .++.+       +...|+++++++||.+ .++....        .        ++. .....+..++|++++
T Consensus       165 Y~~sK~--a~~~~~~~~~~~~~~~~i~~~~v~pg~v-~t~~~~~--------~--------~~~-~~~~~~~~~~~~~~~  224 (247)
T PRK08945        165 YAVSKF--ATEGMMQVLADEYQGTNLRVNCINPGGT-RTAMRAS--------A--------FPG-EDPQKLKTPEDIMPL  224 (247)
T ss_pred             cHHHHH--HHHHHHHHHHHHhcccCEEEEEEecCCc-cCcchhh--------h--------cCc-ccccCCCCHHHHHHH
Confidence            665543  33322       2335899999999955 3332110        0        000 111257889999999


Q ss_pred             HHHhccCcc--cCCcEE
Q 019935          292 CIQALDIEF--TEGEIY  306 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~  306 (333)
                      +++++.++.  ..|+++
T Consensus       225 ~~~~~~~~~~~~~g~~~  241 (247)
T PRK08945        225 YLYLMGDDSRRKNGQSF  241 (247)
T ss_pred             HHHHhCccccccCCeEE
Confidence            999987654  335543

>PLN00015 protochlorophyllide reductase

Probab=99.76  E-value=8.9e-18  Score=151.93  Aligned_cols=217  Identities=14%  Similarity=0.099  Sum_probs=135.7

Q ss_pred             EEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------cCCcEE
Q 019935           86 LVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------EGVTHV  155 (333)
Q Consensus        86 lVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~~~d~v  155 (333)
                      |||||+++||.+++++|+++| ++|++.+|+.++.+.......  ..++.++.+|++|.++++ +++       .++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~-~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVR-QFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHH-HHHHHHHhcCCCCCEE
Confidence            699999999999999999999 999999998876654433221  346788899999999887 433       368999


Q ss_pred             EEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc----CC-C--CCeEEEEeccccccCC---C-----------
Q 019935          156 ICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVTKFN---E-----------  210 (333)
Q Consensus       156 i~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~--~~~~v~~SS~~~~~~~---~-----------  210 (333)
                      |||||....  +  ....+..+..+++|+.|.+++++++    +. +  .++||++||...+...   .           
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999997531  1  1122233457889999999988754    22 3  4799999998764210   0           


Q ss_pred             -----------------CCccchhhhHHHHHH-----HHHHHHHHh-cCCCEEEEEcccccCCCCCCcchHHHHHHhhcc
Q 019935          211 -----------------LPWSIMNLFGVLKYK-----KMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE  267 (333)
Q Consensus       211 -----------------~~~~~~~~~~~~k~k-----~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~  267 (333)
                                       ..+.....|+.+|..     +.+.+.+.+ .|+++++|+||.+...+.............. .
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~-~  238 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFP-P  238 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHH-H
Confidence                             011233456655542     111122222 5899999999966333332211111100000 0


Q ss_pred             cceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecC
Q 019935          268 RRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       268 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~  310 (333)
                        ...    .....+.++++.|+.+++++.+..  ..|..|...+
T Consensus       239 --~~~----~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g  277 (308)
T PLN00015        239 --FQK----YITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNG  277 (308)
T ss_pred             --HHH----HHhcccccHHHhhhhhhhhccccccCCCccccccCC
Confidence              000    011235789999999999888644  3466665554

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.2e-17  Score=144.38  Aligned_cols=195  Identities=8%  Similarity=-0.018  Sum_probs=129.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh-------h
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------F  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~-------~  149 (333)
                      ++++++++||||+++||++++++|+++|++|+++.|+.++.+...+...  +.++..+.+|++|+++++ ++       +
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   80 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIR-HLFDAIEQQF   80 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHH-HHHHHHHHHh
Confidence            3567899999999999999999999999999999999877655432211  345677889999998887 33       3


Q ss_pred             c-CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhh
Q 019935          150 E-GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ~-~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      . ++|++|||||....+.    ..++.....+++|+.+.+.+++++     +.+ .++||++||...+.       ....
T Consensus        81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-------~~~~  153 (227)
T PRK08862         81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-------DLTG  153 (227)
T ss_pred             CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-------Ccch
Confidence            4 7999999998543211    111222234566778877776643     222 46999999976432       1234


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccH-HHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSR-IVVAEAC  292 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~  292 (333)
                      |+.+|+     .+.+..++...|++++.|.||.+ ...... ...                      .|-.. +|++.+.
T Consensus       154 Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i-~t~~~~-~~~----------------------~~~~~~~~~~~~~  209 (227)
T PRK08862        154 VESSNALVSGFTHSWAKELTPFNIRVGGVVPSIF-SANGEL-DAV----------------------HWAEIQDELIRNT  209 (227)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcC-cCCCcc-CHH----------------------HHHHHHHHHHhhe
Confidence            554443     34555666778999999999955 332110 000                      01111 7999999


Q ss_pred             HHhccCcccCCcE
Q 019935          293 IQALDIEFTEGEI  305 (333)
Q Consensus       293 ~~~l~~~~~~g~~  305 (333)
                      .++++++...|..
T Consensus       210 ~~l~~~~~~tg~~  222 (227)
T PRK08862        210 EYIVANEYFSGRV  222 (227)
T ss_pred             eEEEecccccceE
Confidence            9998765444443

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.75  E-value=6.9e-18  Score=140.36  Aligned_cols=233  Identities=16%  Similarity=0.190  Sum_probs=166.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccC---CCCceEEEEccCCCcCCCchhhhc--C
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--G  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~--~  151 (333)
                      .|..||||-||.-|++|++.|+.+||+|+++.|..+.     .+.+....   .+..+....+|++|...+. ..+.  .
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~-k~I~~ik  106 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLI-KLISTIK  106 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHH-HHHhccC
Confidence            3589999999999999999999999999999986543     33332211   1456788999999998888 6766  4


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC---CeEEEEecccccc-------CCCCCccchhhhH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTK-------FNELPWSIMNLFG  220 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~---~~~v~~SS~~~~~-------~~~~~~~~~~~~~  220 (333)
                      .+-|+|+|+..++. -+++-++-.-+++..|+.+|++|++. +.   -||-..||+.-||       .+..|++|.++|+
T Consensus       107 PtEiYnLaAQSHVk-vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa  185 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVK-VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYA  185 (376)
T ss_pred             chhhhhhhhhcceE-EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhH
Confidence            68999999988754 23555566778999999999998864 22   3888999998888       3568899999999


Q ss_pred             HHHHH--HHHHHHHHhcCCCEEEEEcccccC---CCCCCcc--hH----HHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          221 VLKYK--KMGEDFVQKSGLPFTIIRAGRLTD---GPYTSYD--LN----TLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       221 ~~k~k--~~~e~~l~~~gi~~~~vrpg~~~~---g~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+-  +..-.+-..++    .+.+..+++   .|+.+.+  ..    ...+...+....+.+|+.+..++|.|..|.+
T Consensus       186 ~aKmy~~WivvNyREAYn----mfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYV  261 (376)
T KOG1372|consen  186 AAKMYGYWIVVNYREAYN----MFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYV  261 (376)
T ss_pred             HhhhhheEEEEEhHHhhc----ceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHH
Confidence            77642  11112222232    222222332   3333222  11    2223333556667889999999999999999


Q ss_pred             HHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHH
Q 019935          290 EACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKA  329 (333)
Q Consensus       290 ~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~  329 (333)
                      ++++.+|.++.  ..-|.|..|       +..+++|+++.
T Consensus       262 EAMW~mLQ~d~--PdDfViATg-------e~hsVrEF~~~  292 (376)
T KOG1372|consen  262 EAMWLMLQQDS--PDDFVIATG-------EQHSVREFCNL  292 (376)
T ss_pred             HHHHHHHhcCC--CCceEEecC-------CcccHHHHHHH
Confidence            99999999865  356888886       56788888865

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.75  E-value=9.8e-18  Score=138.21  Aligned_cols=214  Identities=21%  Similarity=0.278  Sum_probs=149.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hccCCCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +..+|++++||+.|+||+++.++|+.+|..+.++.-+.+..+..   .+..+...+.++++|+++..+++ +.|      
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~-~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLE-AAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHH-HHHHHHHHH
Confidence            45789999999999999999999999998887776665554443   33334677899999999988888 544      


Q ss_pred             -cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc------CCC--CCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL------PSS--LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~------~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       +.+|++||+||+..  +.   +.+....+|+.|..+-...+      ++|  .+=||++||.....    |.+-.+.|+
T Consensus        81 fg~iDIlINgAGi~~--dk---d~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~----P~p~~pVY~  151 (261)
T KOG4169|consen   81 FGTIDILINGAGILD--DK---DWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD----PMPVFPVYA  151 (261)
T ss_pred             hCceEEEEccccccc--ch---hHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC----ccccchhhh
Confidence             47899999999864  22   33447888988877655533      222  24699999998866    555566677


Q ss_pred             HHHH-----HHH--HHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCC----CcccccccHHHHH
Q 019935          221 VLKY-----KKM--GEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQG----DKLIGEVSRIVVA  289 (333)
Q Consensus       221 ~~k~-----k~~--~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~v~Dva  289 (333)
                      .+|.     .+.  -+.++++.|++++.++|| ++        ...+...+........+.+.    -....-.++.+++
T Consensus       152 AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG-~t--------~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a  222 (261)
T KOG4169|consen  152 ASKAGVVGFTRSLADLAYYQRSGVRFNAVCPG-FT--------RTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCA  222 (261)
T ss_pred             hcccceeeeehhhhhhhhHhhcCEEEEEECCC-cc--------hHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHH
Confidence            6663     333  346778899999999999 42        22333333221111111100    0112346778999


Q ss_pred             HHHHHhccCcccCCcEEEecCCC
Q 019935          290 EACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      ..++.+++.+ .+|.+|.++.|+
T Consensus       223 ~~~v~aiE~~-~NGaiw~v~~g~  244 (261)
T KOG4169|consen  223 INIVNAIEYP-KNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHhhc-cCCcEEEEecCc
Confidence            9999999994 458899998876

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.75  E-value=2.3e-17  Score=143.35  Aligned_cols=204  Identities=15%  Similarity=0.113  Sum_probs=131.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~~~~d~vi~~  158 (333)
                      |+|+||||+|+||++++++|+++|  +.|....|+....  .    ...++.++++|++|++++++  +.++++|+||||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~   74 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC   74 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c----ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            489999999999999999999985  5666666654321  1    14578889999999887761  234589999999


Q ss_pred             CCCCCCCC----CCC-----CCCCCCcchhHHHHHHHHHhc----CC-CCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          159 TGTTAFPS----RRW-----DGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       159 a~~~~~~~----~~~-----~~~~~~~~~n~~~~~~l~~a~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      ||......    ...     +.....+++|+.+...+++++    +. +.++++++||....... .+......|+.+|.
T Consensus        75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~-~~~~~~~~Y~asK~  153 (235)
T PRK09009         75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD-NRLGGWYSYRASKA  153 (235)
T ss_pred             CccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc-CCCCCcchhhhhHH
Confidence            99864211    001     111235678899998888855    22 34689999875432111 12233345665543


Q ss_pred             H-----HHHHHHHHh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          225 K-----KMGEDFVQK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       225 k-----~~~e~~l~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      .     +.+..++..  .+++++.|.||.+ .++....    +             ........+++++|+|+++++++.
T Consensus       154 a~~~~~~~la~e~~~~~~~i~v~~v~PG~v-~t~~~~~----~-------------~~~~~~~~~~~~~~~a~~~~~l~~  215 (235)
T PRK09009        154 ALNMFLKTLSIEWQRSLKHGVVLALHPGTT-DTALSKP----F-------------QQNVPKGKLFTPEYVAQCLLGIIA  215 (235)
T ss_pred             HHHHHHHHHHHHhhcccCCeEEEEEcccce-ecCCCcc----h-------------hhccccCCCCCHHHHHHHHHHHHH
Confidence            2     222222333  4899999999954 5543221    0             001122347899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ...  ..|+.+.+.++
T Consensus       216 ~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        216 NATPAQSGSFLAYDGE  231 (235)
T ss_pred             cCChhhCCcEEeeCCc
Confidence            754  45777777763

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.74  E-value=3.6e-17  Score=151.48  Aligned_cols=186  Identities=19%  Similarity=0.196  Sum_probs=125.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+++|+|+||||+|+||++++++|+++|++|++++|++++........ ...+..+.+|++|++++. +.++++|++|||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~-~~l~~IDiLInn  252 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVGQEAALA-ELLEKVDILIIN  252 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCCeEEEEeeCCCHHHHH-HHhCCCCEEEEC
Confidence            456789999999999999999999999999999999876554322111 234678899999999988 788999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc----C-CC---C-CeEEEEeccccccCCCCCccchhhhHHHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----P-SS---L-KRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~---~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      ||.........+.....+++|+.++.++++++    + .+   . ..+|++|+ +...    + .....|+.+|..  ++
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~----~-~~~~~Y~ASKaA--l~  324 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN----P-AFSPLYELSKRA--LG  324 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc----C-CCchHHHHHHHH--HH
Confidence            99764332233334567899999999999975    1 12   1 23555554 2221    1 123346655543  32


Q ss_pred             H--HHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          230 D--FVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       230 ~--~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .  .++  +.++.+..+.||.+ ..+.                         .....++++|+|+.++++++++.
T Consensus       325 ~l~~l~~~~~~~~I~~i~~gp~-~t~~-------------------------~~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        325 DLVTLRRLDAPCVVRKLILGPF-KSNL-------------------------NPIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHhCCCCceEEEEeCCC-cCCC-------------------------CcCCCCCHHHHHHHHHHHHHCCC
Confidence            2  122  24666777777743 1110                         00124789999999999998753

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.8e-17  Score=140.82  Aligned_cols=195  Identities=12%  Similarity=0.110  Sum_probs=133.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---c--CCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---E--GVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~--~~d~vi  156 (333)
                      +++++||||+|+||++++++|++.|++|++++|+++..+.+.    ..+++++.+|++|.+.++ +++   .  ++|+||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~v~-~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----ALGAEALALDVADPASVA-GLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hccceEEEecCCCHHHHH-HHHHHhcCCCCCEEE
Confidence            368999999999999999999999999999999987766554    335678999999998887 542   2  589999


Q ss_pred             EcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEecccc-ccCCCCCccchhhhHHHHHHH
Q 019935          157 CCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGV-TKFNELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       157 ~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~-~~~~~~~~~~~~~~~~~k~k~  226 (333)
                      ||+|......     ..+++.+..+++|+.++.++++++.    ...+++|++||... ++...  ......|+.+|  .
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~~~~Y~~sK--~  151 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--GTTGWLYRASK--A  151 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--CCCccccHHhH--H
Confidence            9999763211     1223345578899999999998763    22357999998754 33211  11112465444  3


Q ss_pred             HHHHHHHh-----cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          227 MGEDFVQK-----SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       227 ~~e~~l~~-----~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                      .++.+++.     .+++++.++||.+ ..+...                    +    ..+...+|.++.++.++.... 
T Consensus       152 a~~~~~~~~~~~~~~i~v~~v~Pg~i-~t~~~~--------------------~----~~~~~~~~~~~~~~~~~~~~~~  206 (222)
T PRK06953        152 ALNDALRAASLQARHATCIALHPGWV-RTDMGG--------------------A----QAALDPAQSVAGMRRVIAQATR  206 (222)
T ss_pred             HHHHHHHHHhhhccCcEEEEECCCee-ecCCCC--------------------C----CCCCCHHHHHHHHHHHHHhcCc
Confidence            44443332     3789999999955 433210                    0    124677899999998876533 


Q ss_pred             -cCCcEEEecC
Q 019935          301 -TEGEIYEINS  310 (333)
Q Consensus       301 -~~g~~~~v~~  310 (333)
                       ..+..|...+
T Consensus       207 ~~~~~~~~~~~  217 (222)
T PRK06953        207 RDNGRFFQYDG  217 (222)
T ss_pred             ccCceEEeeCC
Confidence             3355666654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.74  E-value=1.6e-18  Score=151.31  Aligned_cols=206  Identities=15%  Similarity=0.154  Sum_probs=142.0

Q ss_pred             cCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh----hhhhccCCCCceEEEEccCCCcCCCch------hhh-cCCcEE
Q 019935           89 GGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDP------AIF-EGVTHV  155 (333)
Q Consensus        89 Gat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~----~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~-~~~d~v  155 (333)
                      |++  ++||++++++|+++|++|++++|+.++.    +++...   .+..++.+|++|+++++.      +.+ .++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE---YGAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH---TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH---cCCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            666  9999999999999999999999998873    333332   224469999999988872      235 689999


Q ss_pred             EEcCCCCCCC--CCC-----CCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          156 ICCTGTTAFP--SRR-----WDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       156 i~~a~~~~~~--~~~-----~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      |||++.....  ...     ++.....+++|+.+...+++++..   .-+++|++||.....    +......|+.+|. 
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~----~~~~~~~y~~sKaa  153 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR----PMPGYSAYSASKAA  153 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS----BSTTTHHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc----cCccchhhHHHHHH
Confidence            9999876420  011     122234567788899988886621   126899999998765    4445556776664 


Q ss_pred             ----HHHHHHHHHh-cCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          225 ----KKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       225 ----k~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                          .+.+...|.. +||++++|+||.+ ..+.....  .+.+...         +-...+...+..++|+|++++++++
T Consensus       154 l~~l~r~lA~el~~~~gIrVN~V~pG~i-~t~~~~~~~~~~~~~~~---------~~~~~pl~r~~~~~evA~~v~fL~s  223 (241)
T PF13561_consen  154 LEGLTRSLAKELAPKKGIRVNAVSPGPI-ETPMTERIPGNEEFLEE---------LKKRIPLGRLGTPEEVANAVLFLAS  223 (241)
T ss_dssp             HHHHHHHHHHHHGGHGTEEEEEEEESSB-SSHHHHHHHTHHHHHHH---------HHHHSTTSSHBEHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhccccCeeeeeecccce-eccchhccccccchhhh---------hhhhhccCCCcCHHHHHHHHHHHhC
Confidence                3455566777 9999999999955 33321100  0111111         1112344567899999999999999


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      +..  ..|+++.++||
T Consensus       224 ~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  224 DAASYITGQVIPVDGG  239 (241)
T ss_dssp             GGGTTGTSEEEEESTT
T ss_pred             ccccCccCCeEEECCC
Confidence            863  56999999986

...

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=1.3e-18  Score=137.27  Aligned_cols=219  Identities=15%  Similarity=0.087  Sum_probs=156.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~v  155 (333)
                      ++.++.|+|||+.-+||+.++..|++.|++|+++.|++.....+.++. ..-++.+.+|+.+.+.+. +.+.   .+|.+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-p~~I~Pi~~Dls~wea~~-~~l~~v~pidgL   81 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-PSLIIPIVGDLSAWEALF-KLLVPVFPIDGL   81 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-CcceeeeEecccHHHHHH-HhhcccCchhhh
Confidence            457889999999999999999999999999999999999988876553 223788999999876666 5544   57999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHHHHH--
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~--  224 (333)
                      +||||......   -..+.....|++|+.+.+++.+...     ++ .+.||++||.+...    ++.+.+.|..+|.  
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R----~~~nHtvYcatKaAL  157 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR----PLDNHTVYCATKAAL  157 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc----ccCCceEEeecHHHH
Confidence            99999764211   1123344589999999999888542     12 24799999998876    6666666665553  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          225 ---KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       225 ---k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                         .+.+..+|....|+++.+.|..++ ..++.-+|..-.   +.+.    +-+.-+...|..+++++.++.+++++.. 
T Consensus       158 DmlTk~lAlELGp~kIRVNsVNPTVVm-T~MG~dnWSDP~---K~k~----mL~riPl~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  158 DMLTKCLALELGPQKIRVNSVNPTVVM-TDMGRDNWSDPD---KKKK----MLDRIPLKRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             HHHHHHHHHhhCcceeEeeccCCeEEE-ecccccccCCch---hccc----hhhhCchhhhhHHHHHHhhheeeeecCcC
Confidence               455556667778999999999554 333322232211   1011    1122345578999999999999999865 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|..+.+.||
T Consensus       230 mttGstlpveGG  241 (245)
T KOG1207|consen  230 MTTGSTLPVEGG  241 (245)
T ss_pred             cccCceeeecCC
Confidence             44777887775

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-17  Score=142.92  Aligned_cols=164  Identities=17%  Similarity=0.134  Sum_probs=113.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-----CCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----~~d~vi  156 (333)
                      +++++||||+|+||+++++.|+++|++|++++|+++..+.+..   ..++.++.+|++|+++++ ++++     ++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~d~~~~~-~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA---LPGVHIEKLDMNDPASLD-QLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh---ccccceEEcCCCCHHHHH-HHHHHhhcCCCCEEE
Confidence            3689999999999999999999999999999999876654432   346778889999988877 5443     589999


Q ss_pred             EcCCCCCCC-----CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHHHHH--
Q 019935          157 CCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (333)
Q Consensus       157 ~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k--  225 (333)
                      ||||.....     ....++....+.+|+.+..++++++.    .+..+++++||....... .+......|+.+|..  
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~-~~~~~~~~Y~~sK~a~~  155 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVEL-PDGGEMPLYKASKAALN  155 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccccc-CCCCCccchHHHHHHHH
Confidence            999985321     11223344577889999999988662    234688999886543211 111223346655432  


Q ss_pred             ---HHHHHHHHhcCCCEEEEEcccccCCC
Q 019935          226 ---KMGEDFVQKSGLPFTIIRAGRLTDGP  251 (333)
Q Consensus       226 ---~~~e~~l~~~gi~~~~vrpg~~~~g~  251 (333)
                         +.+...+...+++++.|+||.+ ..+
T Consensus       156 ~~~~~l~~e~~~~~i~v~~i~PG~i-~t~  183 (225)
T PRK08177        156 SMTRSFVAELGEPTLTVLSMHPGWV-KTD  183 (225)
T ss_pred             HHHHHHHHHhhcCCeEEEEEcCCce-ecC
Confidence               2222333456899999999954 443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=3.7e-17  Score=146.42  Aligned_cols=221  Identities=12%  Similarity=0.060  Sum_probs=133.8

Q ss_pred             CCCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc---------chhh--hhhccCCCC-----ceEEEEccCC
Q 019935           78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---------EKAT--TLFGKQDEE-----TLQVCKGDTR  139 (333)
Q Consensus        78 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~--~~~~~~~~~-----~~~~v~~D~~  139 (333)
                      .++++|+++||||+  .+||+++++.|+++|++|++.+|.+         +..+  .......+.     ++..+.+|+.
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            35678999999995  9999999999999999999976542         1100  000000011     1112334555


Q ss_pred             CcCC------------------Cch------hhhcCCcEEEEcCCCCC-----CCCCCCCCCCCCcchhHHHHHHHHHhc
Q 019935          140 NPKD------------------LDP------AIFEGVTHVICCTGTTA-----FPSRRWDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       140 d~~~------------------~~~------~~~~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                      +++.                  ++.      +.+.++|++|||||...     +.+..+++....+++|+.+.+++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            5442                  220      22457999999998642     111223344557799999999999866


Q ss_pred             -CC--CCCeEEEEeccccccCCCCCccch-hhhHHHHH-----HHHHHHHHHh-cCCCEEEEEcccccCCCCCCcc--hH
Q 019935          191 -PS--SLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYD--LN  258 (333)
Q Consensus       191 -~~--~~~~~v~~SS~~~~~~~~~~~~~~-~~~~~~k~-----k~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~--~~  258 (333)
                       +.  ..+++|++||.....    +.+.. ..|+.+|+     .+.+...+.+ +||+++.|.||.+ ..+.....  ..
T Consensus       164 ~p~m~~~G~ii~iss~~~~~----~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v-~T~~~~~~~~~~  238 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMR----AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPL-ASRAGKAIGFIE  238 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcC----cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCc-cChhhhcccccH
Confidence             21  235899999877643    22222 25666664     3444455554 5999999999955 44432100  01


Q ss_pred             HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          259 TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      .......         .......+..++|+|++++++++...  ..|+++.+.+|-
T Consensus       239 ~~~~~~~---------~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        239 RMVDYYQ---------DWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1111000         01122356789999999999998643  458889998764

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.71  E-value=1.3e-16  Score=147.09  Aligned_cols=241  Identities=21%  Similarity=0.277  Sum_probs=160.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhh---hhhc------------cC--CCCceEEEEccCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKAT---TLFG------------KQ--DEETLQVCKGDTR  139 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~---~~~~------------~~--~~~~~~~v~~D~~  139 (333)
                      ..+|+|+|||||||+|..+++.|++.-   .+++++.|......   .+..            ..  ...++..+.||+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            467899999999999999999999863   47899999654321   1110            00  1357788999998


Q ss_pred             CcCCCch-----hhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccC----
Q 019935          140 NPKDLDP-----AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKF----  208 (333)
Q Consensus       140 d~~~~~~-----~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~----  208 (333)
                      +++.--.     ...+.+|+|||+|+...+.+    .......+|..|+.++++.|++  ..+-+|++|+..+.-.    
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde----~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDE----PLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccch----hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            8653221     35678999999999876432    2344677899999999998876  5789999999887521    


Q ss_pred             CCCCccc------h------------------------hhhHHHHHHHHHHHHHHhc--CCCEEEEEcccccCCCCCCcc
Q 019935          209 NELPWSI------M------------------------NLFGVLKYKKMGEDFVQKS--GLPFTIIRAGRLTDGPYTSYD  256 (333)
Q Consensus       209 ~~~~~~~------~------------------------~~~~~~k~k~~~e~~l~~~--gi~~~~vrpg~~~~g~~~~~~  256 (333)
                      ++.++..      .                        -+.-|+-.|..+|..+.++  +++++|+||+.+ ......+ 
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI-~st~~EP-  243 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSII-TSTYKEP-  243 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCce-eccccCC-
Confidence            1111110      0                        0111233467788888654  799999999955 3332211 


Q ss_pred             hHHHHHHhh---------cccce-eecCCCCcccccccHHHHHHHHHHhccCcc-----cCCcEEEecCCCCCCCCCCcc
Q 019935          257 LNTLLKATA---------GERRA-VLMGQGDKLIGEVSRIVVAEACIQALDIEF-----TEGEIYEINSVEGEGPGSDPQ  321 (333)
Q Consensus       257 ~~~~~~~~~---------~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-----~~g~~~~v~~g~~~~~~~~~~  321 (333)
                      ++-|+....         +.+.+ ..+.+.+...+.|.+|.++.+++.+...-.     ....+||++++..     .++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~-----Np~  318 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSND-----NPV  318 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEeccccc-----Ccc
Confidence            122222222         12222 245567788899999999999987663211     1245999999764     889


Q ss_pred             cHHHHHHHHh
Q 019935          322 KWRELFKAAK  331 (333)
Q Consensus       322 s~~e~~~~i~  331 (333)
                      +|.++.+...
T Consensus       319 t~~~~~e~~~  328 (467)
T KOG1221|consen  319 TWGDFIELAL  328 (467)
T ss_pred             cHHHHHHHHH
Confidence            9999998754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.69  E-value=1.9e-16  Score=137.25  Aligned_cols=168  Identities=21%  Similarity=0.261  Sum_probs=131.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--------  150 (333)
                      ....|.|+|||...+.|+.+|.+|.++|+.|.+-...++.++.+......+++..++.|++++++++ ++.+        
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~-~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVK-EAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHH-HHHHHHHHhccc
Confidence            3456789999999999999999999999999999988888777766555778888999999999998 4432        


Q ss_pred             -CCcEEEEcCCCCCCC-CCCC---CCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCC-CCCccchhhhH
Q 019935          151 -GVTHVICCTGTTAFP-SRRW---DGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN-ELPWSIMNLFG  220 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~-~~~~---~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~-~~~~~~~~~~~  220 (333)
                       +.-.||||||+.... ..+|   ++.....++|+.|+..+.++.    |+-.+|+|++||+...-.. ....+..+.||
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFA  184 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHH
Confidence             678999999976422 2233   344556789999999999876    3445799999999885421 22334556666


Q ss_pred             HHHHHHHHHHHHHhcCCCEEEEEcccc
Q 019935          221 VLKYKKMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       221 ~~k~k~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                      +......++++++..|+++.+|-||.+
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            666777888899999999999999944

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=5.3e-16  Score=126.01  Aligned_cols=165  Identities=12%  Similarity=0.114  Sum_probs=125.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      ..+.+||||||+.+||.++++++.+.|-+|++..|+.++.++....  .+.+.-..+|+.|.++.+ ++.       ..+
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~--~p~~~t~v~Dv~d~~~~~-~lvewLkk~~P~l   79 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE--NPEIHTEVCDVADRDSRR-ELVEWLKKEYPNL   79 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc--CcchheeeecccchhhHH-HHHHHHHhhCCch
Confidence            4567899999999999999999999999999999999988876654  567788899999988777 443       368


Q ss_pred             cEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccC-CCCCccchhhhHH
Q 019935          153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF-NELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~-~~~~~~~~~~~~~  221 (333)
                      ++||||||+...-+     ...+......++|+.+..+|+.++     ++.-.-||++||.-++-+ ...|.++.++.+.
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAai  159 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAI  159 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHH
Confidence            99999999976211     111222334567999999888865     333458999999877653 3446666665555


Q ss_pred             HHHHHHHHHHHHhcCCCEEEEEcccc
Q 019935          222 LKYKKMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       222 ~k~k~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                      ......++..++..+++++-+.|..+
T Consensus       160 Hsyt~aLR~Qlk~t~veVIE~~PP~V  185 (245)
T COG3967         160 HSYTLALREQLKDTSVEVIELAPPLV  185 (245)
T ss_pred             HHHHHHHHHHhhhcceEEEEecCCce
Confidence            55567778888888999999999955

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=2e-15  Score=135.11  Aligned_cols=211  Identities=20%  Similarity=0.122  Sum_probs=139.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc----CCCCceEEEEccCCCcCCCchhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAI----  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~D~~d~~~~~~~~----  148 (333)
                      ..+..+++++|||||++||.+++++|+.+|++|+...|+.++.++....    .....+.++++|+++.+++. ++    
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~-~fa~~~  108 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVR-KFAEEF  108 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHH-HHHHHH
Confidence            3456678999999999999999999999999999999998665554332    22566888999999998887 33    


Q ss_pred             ---hcCCcEEEEcCCCCCCCCC-CCCCCCCCcchhHHHHHHHHHhc----CC-CCCeEEEEeccccccC--------CCC
Q 019935          149 ---FEGVTHVICCTGTTAFPSR-RWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKF--------NEL  211 (333)
Q Consensus       149 ---~~~~d~vi~~a~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~----~~-~~~~~v~~SS~~~~~~--------~~~  211 (333)
                         ....|++|||||++..+.. ..+..+..+.+|..|.+.|++.+    +. .-.|||++||......        +..
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~  188 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKA  188 (314)
T ss_pred             HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhc
Confidence               3378999999999876542 34557788999999999998865    33 2279999999775110        001


Q ss_pred             C-ccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccH
Q 019935          212 P-WSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSR  285 (333)
Q Consensus       212 ~-~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  285 (333)
                      . +.....|+.+|..     .+..+.+.+ |+.++.+.||.+ .+..... ...+.+.+...-. ..        =+-++
T Consensus       189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v-~t~~l~r-~~~~~~~l~~~l~-~~--------~~ks~  256 (314)
T KOG1208|consen  189 KLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVV-KTTGLSR-VNLLLRLLAKKLS-WP--------LTKSP  256 (314)
T ss_pred             cCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcc-cccceec-chHHHHHHHHHHH-HH--------hccCH
Confidence            1 2222336655543     222223333 899999999954 4442211 1112221110000 00        01356


Q ss_pred             HHHHHHHHHhccCcc
Q 019935          286 IVVAEACIQALDIEF  300 (333)
Q Consensus       286 ~Dva~a~~~~l~~~~  300 (333)
                      ++-|+..++++.+++
T Consensus       257 ~~ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  257 EQGAATTCYAALSPE  271 (314)
T ss_pred             HHHhhheehhccCcc
Confidence            678888888888875

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=1.2e-16  Score=126.07  Aligned_cols=215  Identities=17%  Similarity=0.172  Sum_probs=154.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~~d  153 (333)
                      ++-..|||||.+++|++.++.|++.|+.|.+++...++.....++. +.++.+...|++.++++. .+       |.+.|
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-g~~~vf~padvtsekdv~-aala~ak~kfgrld   85 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-GGKVVFTPADVTSEKDVR-AALAKAKAKFGRLD   85 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-CCceEEeccccCcHHHHH-HHHHHHHhhcccee
Confidence            4568999999999999999999999999999998877766555444 778999999999998887 43       45899


Q ss_pred             EEEEcCCCCCC---------CCCCCCCCCCCcchhHHHHHHHHHhcC---------CCC--CeEEEEeccccccCCCCCc
Q 019935          154 HVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSALP---------SSL--KRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       154 ~vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~a~~---------~~~--~~~v~~SS~~~~~~~~~~~  213 (333)
                      +.+||||+...         ....+++.+...++|+.|++|+++...         ++.  +-+|+..|.+++..    .
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg----q  161 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG----Q  161 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC----c
Confidence            99999997531         113355667788999999999998431         122  35788888887752    2


Q ss_pred             cchhhhHHHH-----HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          214 SIMNLFGVLK-----YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       214 ~~~~~~~~~k-----~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .....|..+|     +..-+.+.+...||+++.|.|| +++.|.... ++.-.+.+....    ++   ..-.+.++.+.
T Consensus       162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapg-lf~tpllss-lpekv~~fla~~----ip---fpsrlg~p~ey  232 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPG-LFDTPLLSS-LPEKVKSFLAQL----IP---FPSRLGHPHEY  232 (260)
T ss_pred             cchhhhhcccCceEeeechhhhhcccCceEEEeeccc-ccCChhhhh-hhHHHHHHHHHh----CC---CchhcCChHHH
Confidence            3344454444     2345566777789999999999 556654321 222222221111    11   11256788899


Q ss_pred             HHHHHHhccCcccCCcEEEecC
Q 019935          289 AEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       289 a~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      +..+-.+++++-.+|+++.+++
T Consensus       233 ahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  233 AHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             HHHHHHHHhCcccCCeEEEecc
Confidence            9999999999988899999987

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.63  E-value=2.1e-15  Score=124.41  Aligned_cols=160  Identities=21%  Similarity=0.133  Sum_probs=111.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhh---cc--CCCCceEEEEccCCCcCCCchhhh-------
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF---GK--QDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~---~~--~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++||||+|+||.+++++|+++|+ .|+++.|+....+...   ..  ..+.++.++.+|++++++++ +.+       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALA-AALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            4799999999999999999999996 6888888764432211   00  01456788999999988777 443       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      ..+|+|||++|......   ...+.....+++|+.++.+++++++. +.+++|++||.....    +......|+.+|..
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~----~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL----GNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc----CCCCchhhHHHHHH
Confidence            35799999999754211   11233345688999999999998854 678999999986643    22233456655432


Q ss_pred             -HHHHHHHHhcCCCEEEEEcccc
Q 019935          226 -KMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       226 -~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                       ....+.++..|++++++.||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      156 LDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             HHHHHHHHHhcCCceEEEeeccc
Confidence             2222445677999999999844

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.62  E-value=4.6e-15  Score=122.52  Aligned_cols=202  Identities=17%  Similarity=0.186  Sum_probs=131.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CCeEEE-EEcCcchhh-hhhcc-CCCCceEEEEccCCCcCCCchhh---------
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKAT-TLFGK-QDEETLQVCKGDTRNPKDLDPAI---------  148 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~-~~~~~-~~~~~~~~v~~D~~d~~~~~~~~---------  148 (333)
                      .+.|+||||+++||-.|+++|++. |.++++ ..|+++++. ++... ..++++++++.|+++.+++. .+         
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~-~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESID-NFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHH-HHHHHHHhhcc
Confidence            356999999999999999999975 766655 566787743 22221 13889999999999988877 33         


Q ss_pred             hcCCcEEEEcCCCCCCCCCCCCC----CCCCcchhHHHHHHHHHhc----C-CC-----------CCeEEEEeccccccC
Q 019935          149 FEGVTHVICCTGTTAFPSRRWDG----DNTPEKVDWEGVRNLVSAL----P-SS-----------LKRIVLVSSVGVTKF  208 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~a~----~-~~-----------~~~~v~~SS~~~~~~  208 (333)
                      .+++|.+|+|||....-......    ....+++|..|...+.+++    + +.           ...|||+||.+.-- 
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~-  160 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI-  160 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc-
Confidence            24789999999986411111111    1235788988888877755    1 11           13799999987642 


Q ss_pred             CCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       209 ~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      ......+...|..+|+     .+.+.-.+++.++-++.++||++-- ..                     |.   ....+
T Consensus       161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T-DM---------------------gg---~~a~l  215 (249)
T KOG1611|consen  161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT-DM---------------------GG---KKAAL  215 (249)
T ss_pred             CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc-CC---------------------CC---CCccc
Confidence            1112234455665553     2445556677889999999998731 11                     11   22456


Q ss_pred             cHHHHHHHHHHhccC--cccCCcEEEecC
Q 019935          284 SRIVVAEACIQALDI--EFTEGEIYEINS  310 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~--~~~~g~~~~v~~  310 (333)
                      ++|+-+.-++..+.+  ++..|..|+-.+
T Consensus       216 tveeSts~l~~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  216 TVEESTSKLLASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             chhhhHHHHHHHHHhcCcccCcceEccCC
Confidence            677777777777764  334577777655

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.60  E-value=5.1e-15  Score=122.16  Aligned_cols=203  Identities=18%  Similarity=0.087  Sum_probs=148.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      -...++.|++||.|+++++...+.|+.|.++.|+..+.  +.+.. ...+.++.+|....+-++ ..+.++..++.+++.
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~--~l~sw-~~~vswh~gnsfssn~~k-~~l~g~t~v~e~~gg  127 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ--TLSSW-PTYVSWHRGNSFSSNPNK-LKLSGPTFVYEMMGG  127 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc--hhhCC-CcccchhhccccccCcch-hhhcCCcccHHHhcC
Confidence            35789999999999999999999999999999987632  22211 557888999998877777 778899999999987


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHH-hcCCCE
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ-KSGLPF  239 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~-~~gi~~  239 (333)
                      ..       ....+.++|-....+.++++ ++|+++|+|+|....      ...+....||.+.|+.+|.++. .++++-
T Consensus       128 fg-------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~------~~~~~i~rGY~~gKR~AE~Ell~~~~~rg  194 (283)
T KOG4288|consen  128 FG-------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF------GLPPLIPRGYIEGKREAEAELLKKFRFRG  194 (283)
T ss_pred             cc-------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc------CCCCccchhhhccchHHHHHHHHhcCCCc
Confidence            54       34556778888888888865 569999999995443      2334444589999999997764 578999


Q ss_pred             EEEEcccccCCCCCCcc--------hHHHHHHhhccc-ce-eecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          240 TIIRAGRLTDGPYTSYD--------LNTLLKATAGER-RA-VLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       240 ~~vrpg~~~~g~~~~~~--------~~~~~~~~~~~~-~~-~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                      +++||| |+||.+.-..        ...+........ +. ...--++....++.+++||.++++++++|+..
T Consensus       195 iilRPG-Fiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~  266 (283)
T KOG4288|consen  195 IILRPG-FIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK  266 (283)
T ss_pred             eeeccc-eeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC
Confidence            999999 7788764211        111111111111 11 11223456678999999999999999998764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.60  E-value=3.6e-15  Score=130.81  Aligned_cols=168  Identities=20%  Similarity=0.227  Sum_probs=114.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhcc--CCC-CceEEEEccCCC-cCCCch------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGK--QDE-ETLQVCKGDTRN-PKDLDP------  146 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~--~~~-~~~~~v~~D~~d-~~~~~~------  146 (333)
                      ..++++||||||+++||.++++.|++.|++|+++.|+.+.  .+.....  ... ..+.+..+|+++ .++++.      
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999988887543  2222111  101 357778899998 766651      


Q ss_pred             hhhcCCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhcCCCCC--eEEEEeccccccCCCCCccchhhhH
Q 019935          147 AIFEGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALPSSLK--RIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       147 ~~~~~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +.+.++|++|||||....  +  +...+..+..+++|+.+...+++++....+  +||++||.... .....   ...|+
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---~~~Y~  157 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---QAAYA  157 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---cchHH
Confidence            223469999999998642  1  111233445788899999998884432223  99999999875 32211   33455


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCC
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGP  251 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~  251 (333)
                      .+|.     .+.+...+...|++++.|.|| .+..+
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG-~~~t~  192 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPG-YIDTP  192 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEec-cCCCc
Confidence            4443     344446667789999999999 43443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.59  E-value=1.1e-14  Score=127.05  Aligned_cols=191  Identities=14%  Similarity=0.118  Sum_probs=128.2

Q ss_pred             HHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc----CCcEEEEcCCCCCCCCCCCCCCC
Q 019935           98 VVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----GVTHVICCTGTTAFPSRRWDGDN  173 (333)
Q Consensus        98 l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~  173 (333)
                      ++++|+++|++|++++|+.++..         ..+++.+|++|.++++ ++++    ++|+||||||...     ..+..
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~---------~~~~~~~Dl~~~~~v~-~~~~~~~~~iD~li~nAG~~~-----~~~~~   65 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT---------LDGFIQADLGDPASID-AAVAALPGRIDALFNIAGVPG-----TAPVE   65 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh---------hhHhhcccCCCHHHHH-HHHHHhcCCCeEEEECCCCCC-----CCCHH
Confidence            47899999999999999876532         1346789999999888 6654    6899999999752     12345


Q ss_pred             CCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCC-----------------------CCccchhhhHHHHHH--
Q 019935          174 TPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNE-----------------------LPWSIMNLFGVLKYK--  225 (333)
Q Consensus       174 ~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~-----------------------~~~~~~~~~~~~k~k--  225 (333)
                      ..+++|+.++..+++++ +.  ..++||++||.++++...                       .+......|+.+|.-  
T Consensus        66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  145 (241)
T PRK12428         66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALI  145 (241)
T ss_pred             HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHH
Confidence            58899999999999966 22  236999999998875211                       133445667776642  


Q ss_pred             ---HHHH-HHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          226 ---KMGE-DFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       226 ---~~~e-~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                         +.+. ..+...|+++++|+||.+ .++.............. ..      .......+..++|+|++++++++.+. 
T Consensus       146 ~~~~~la~~e~~~~girvn~v~PG~v-~T~~~~~~~~~~~~~~~-~~------~~~~~~~~~~pe~va~~~~~l~s~~~~  217 (241)
T PRK12428        146 LWTMRQAQPWFGARGIRVNCVAPGPV-FTPILGDFRSMLGQERV-DS------DAKRMGRPATADEQAAVLVFLCSDAAR  217 (241)
T ss_pred             HHHHHHHHHhhhccCeEEEEeecCCc-cCcccccchhhhhhHhh-hh------cccccCCCCCHHHHHHHHHHHcChhhc
Confidence               2222 445667999999999955 66643211110000000 00      01123356889999999999997643 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|+.+.+.+|
T Consensus       218 ~~~G~~i~vdgg  229 (241)
T PRK12428        218 WINGVNLPVDGG  229 (241)
T ss_pred             CccCcEEEecCc
Confidence             44788888875

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.59  E-value=1.9e-14  Score=119.23  Aligned_cols=234  Identities=16%  Similarity=0.198  Sum_probs=160.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh--cCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--~~~d~vi~  157 (333)
                      +..+|||||+-|.+|..++..|... |.+-++++--....+..     ...--++..|+.|...++ +++  .++|.+||
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~GPyIy~DILD~K~L~-eIVVn~RIdWL~H  116 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVGPYIYLDILDQKSLE-EIVVNKRIDWLVH  116 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccCCchhhhhhccccHH-Hhhcccccceeee
Confidence            4458999999999999999999876 76555543322222222     223346788999999998 554  37999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--CC------ccchhhhHHHHHH--H
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--LP------WSIMNLFGVLKYK--K  226 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--~~------~~~~~~~~~~k~k--~  226 (333)
                      ..+......  .....-...+|+.|..|+++.+++ .. ++..-|+++++|...  .|      -.+...||++|.+  .
T Consensus       117 fSALLSAvG--E~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL  193 (366)
T KOG2774|consen  117 FSALLSAVG--ETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAEL  193 (366)
T ss_pred             HHHHHHHhc--ccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHH
Confidence            876533110  112233578999999999996654 55 555679999998533  11      2356789999865  3


Q ss_pred             HHHHHHHhcCCCEEEEEccccc-CC-CCC---CcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLT-DG-PYT---SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~-~g-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                      ..|.+..+.|+++-++|...++ .. |++   .+....|..... ..+...+-.++.+..+++.+|+-+++++++..+. 
T Consensus       194 ~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~-~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~  272 (366)
T KOG2774|consen  194 LGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ-KGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQ  272 (366)
T ss_pred             HHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHH-cCCcccccCCCccCceeehHHHHHHHHHHHhCCHH
Confidence            4455566789999999965565 22 222   333444544444 3344444456788899999999999999998764 


Q ss_pred             -cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          301 -TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       301 -~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                       ...++||+.+        ...+-+|++..|.+
T Consensus       273 ~lkrr~ynvt~--------~sftpee~~~~~~~  297 (366)
T KOG2774|consen  273 SLKRRTYNVTG--------FSFTPEEIADAIRR  297 (366)
T ss_pred             Hhhhheeeece--------eccCHHHHHHHHHh
Confidence             3367999998        77888999988764

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.59  E-value=1.4e-14  Score=125.59  Aligned_cols=166  Identities=14%  Similarity=0.136  Sum_probs=127.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCC----Cchhhhc--C
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKD----LDPAIFE--G  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~----~~~~~~~--~  151 (333)
                      .++-++|||||.+||++.+++|+++|.+|+++.|+.++++++.+++.   ...+.++..|.++++.    ++ +.+.  +
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~-~~l~~~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLL-EKLAGLD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHH-HHhcCCc
Confidence            34679999999999999999999999999999999999888765553   3457789999999886    22 3344  4


Q ss_pred             CcEEEEcCCCCCC-CC----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          152 VTHVICCTGTTAF-PS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       152 ~d~vi~~a~~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      +-++|||+|.... |.    ...+..+....+|+.++..+.+..     +.+.+-||++||.+...    |.+..+.|+.
T Consensus       127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~----p~p~~s~ysa  202 (312)
T KOG1014|consen  127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLI----PTPLLSVYSA  202 (312)
T ss_pred             eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccc----cChhHHHHHH
Confidence            5689999998762 21    112233567788999998888865     22456799999998876    7778888887


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCC
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPY  252 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~  252 (333)
                      +|.     ...+..+.+..||.+-.+-|..+ -+..
T Consensus       203 sK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~V-aTkm  237 (312)
T KOG1014|consen  203 SKAFVDFFSRCLQKEYESKGIFVQSVIPYLV-ATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEeehhhe-eccc
Confidence            775     56677778888999999999955 3443

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.58  E-value=1.5e-15  Score=123.87  Aligned_cols=156  Identities=20%  Similarity=0.222  Sum_probs=118.4

Q ss_pred             CCeEEEEcC-CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh--------hcCC
Q 019935           82 SKLVLVAGG-SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--------FEGV  152 (333)
Q Consensus        82 ~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~--------~~~~  152 (333)
                      .++|||||. .|+||.+|++++.++|+.|++..|+.+.-..+.-   ..++...+.|+++++.+. ..        .+.+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~---~~gl~~~kLDV~~~~~V~-~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI---QFGLKPYKLDVSKPEEVV-TVSGEVRANPDGKL   82 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH---hhCCeeEEeccCChHHHH-HHHHHHhhCCCCce
Confidence            467888875 6999999999999999999999999877666542   456888999999999876 32        2368


Q ss_pred             cEEEEcCCCCC-CC--CCCCCCCCCCcchhHHHHHHHHHhcCC----CCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          153 THVICCTGTTA-FP--SRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       153 d~vi~~a~~~~-~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      |.+|||||..- .|  +.....-+..+++|+.|..+++++...    ..+.||+++|..++-    |++-.+.|..+|+ 
T Consensus        83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v----pfpf~~iYsAsKA-  157 (289)
T KOG1209|consen   83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV----PFPFGSIYSASKA-  157 (289)
T ss_pred             EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe----ccchhhhhhHHHH-
Confidence            99999999753 12  122334456899999999999998742    245899999999887    6666667765554 


Q ss_pred             HHHHHH-------HHhcCCCEEEEEcccc
Q 019935          226 KMGEDF-------VQKSGLPFTIIRAGRL  247 (333)
Q Consensus       226 ~~~e~~-------l~~~gi~~~~vrpg~~  247 (333)
                       .+.++       ++..|++++.+-+|.+
T Consensus       158 -Aihay~~tLrlEl~PFgv~Vin~itGGv  185 (289)
T KOG1209|consen  158 -AIHAYARTLRLELKPFGVRVINAITGGV  185 (289)
T ss_pred             -HHHHhhhhcEEeeeccccEEEEecccce
Confidence             33333       3456999999999877

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.55  E-value=2.9e-14  Score=113.04  Aligned_cols=157  Identities=25%  Similarity=0.222  Sum_probs=124.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .+.++.++|.||||-.|+.+++++++.+  -+|+++.|.+..-.+.     ...+..+..|...-+++. ..+.+.|+.+
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a-~~~qg~dV~F   88 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLA-TNEQGPDVLF   88 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHH-hhhcCCceEE
Confidence            3456789999999999999999999987  5899999875222111     456667788888888887 7889999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~  235 (333)
                      ++.|.....    .....+++++..-...+.++++. |+++|+.+||.++..        .+.+.|.|.|-++|+.+.+.
T Consensus        89 caLgTTRgk----aGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~--------sSrFlY~k~KGEvE~~v~eL  156 (238)
T KOG4039|consen   89 CALGTTRGK----AGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP--------SSRFLYMKMKGEVERDVIEL  156 (238)
T ss_pred             Eeecccccc----cccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc--------ccceeeeeccchhhhhhhhc
Confidence            999986522    22455889999989999998876 899999999999853        34577889999999999988


Q ss_pred             CC-CEEEEEcccccCCCCCC
Q 019935          236 GL-PFTIIRAGRLTDGPYTS  254 (333)
Q Consensus       236 gi-~~~~vrpg~~~~g~~~~  254 (333)
                      .+ +++|+|||.+ -+.+..
T Consensus       157 ~F~~~~i~RPG~l-l~~R~e  175 (238)
T KOG4039|consen  157 DFKHIIILRPGPL-LGERTE  175 (238)
T ss_pred             cccEEEEecCcce-eccccc
Confidence            87 5999999965 555543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=5.4e-14  Score=121.87  Aligned_cols=201  Identities=15%  Similarity=0.160  Sum_probs=139.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhh-------cC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++|+||||+.+||.+++.++..+|++|+++.|+.++..+....+.    ...+.+..+|+.|.+++. ..+       ..
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~-~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVS-KVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHH-HHHhhhhhccCC
Confidence            689999999999999999999999999999999988877655443    122567889998877666 333       35


Q ss_pred             CcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----CC--CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|.+|||||..-..   +.+....+..+++|..|+.|+++++    +.  ..++|+.+||..+.-    +++..+.|..+
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~----~i~GysaYs~s  188 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML----GIYGYSAYSPS  188 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc----CcccccccccH
Confidence            79999999975321   1122233456789999999999855    22  345999999987744    45555555544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |.     ...+.+++..+|+.++..-|+.+ ..|+...       .-...+.. .+..   ...+.+..+|+|.+++.-+
T Consensus       189 K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~-~tpGfE~-------En~tkP~~t~ii~---g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  189 KFALRGLAEALRQELIKYGVHVTLYYPPDT-LTPGFER-------ENKTKPEETKIIE---GGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHHHHhhcceEEEEEcCCCC-CCCcccc-------ccccCchheeeec---CCCCCcCHHHHHHHHHhHH
Confidence            43     34556777778999999999976 4443210       00001111 1221   2225589999999999988


Q ss_pred             cCc
Q 019935          297 DIE  299 (333)
Q Consensus       297 ~~~  299 (333)
                      ...
T Consensus       258 ~rg  260 (331)
T KOG1210|consen  258 KRG  260 (331)
T ss_pred             hhc
Confidence            764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.51  E-value=9.5e-15  Score=119.92  Aligned_cols=137  Identities=23%  Similarity=0.220  Sum_probs=100.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcC--cchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRD--PEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~--~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      |+++||||+|+||++++++|+++| ..|+++.|+  .+..+.+....  ...++.++++|++++++++ +++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIR-ALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHH-HHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence            579999999999999999999995 577888888  44444432211  2578899999999998887 443       4


Q ss_pred             CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      .+|+||||+|.......   ..+.....+++|+.+...+.+++.. +-++||++||+....    +......|+.+|.
T Consensus        80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~aska  153 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR----GSPGMSAYSASKA  153 (167)
T ss_dssp             SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS----SSTTBHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc----CCCCChhHHHHHH
Confidence            78999999998652111   1122234678899999999997643 677999999998875    5555556665543

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.42  E-value=7.4e-13  Score=144.96  Aligned_cols=166  Identities=18%  Similarity=0.160  Sum_probs=115.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcch-----------------------------------------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEK-----------------------------------------  118 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~-----------------------------------------  118 (333)
                      +++++|||||+|+||.+++++|+++ |++|+++.|++..                                         
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 6999999998210                                         


Q ss_pred             ------hhhhhcc--CCCCceEEEEccCCCcCCCchhhhc------CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHH
Q 019935          119 ------ATTLFGK--QDEETLQVCKGDTRNPKDLDPAIFE------GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWE  181 (333)
Q Consensus       119 ------~~~~~~~--~~~~~~~~v~~D~~d~~~~~~~~~~------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~  181 (333)
                            .......  ..+..+.++.+|++|.++++ ++++      ++|+||||||.....   ....+.....+++|+.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~-~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVA-ATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                  0000000  01456888999999998887 4443      589999999976421   2223344557899999


Q ss_pred             HHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHH--HHHHHHHHh-cCCCEEEEEcccccCCCC
Q 019935          182 GVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--KMGEDFVQK-SGLPFTIIRAGRLTDGPY  252 (333)
Q Consensus       182 ~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k--~~~e~~l~~-~gi~~~~vrpg~~~~g~~  252 (333)
                      |++++++++.. ..++||++||..++.    +......|+.+|.-  ..+..+-.+ .+++++.|.||.+ .+..
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~----G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~w-dtgm 2224 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFY----GNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPW-DGGM 2224 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcC----CCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCee-cCCc
Confidence            99999998744 567999999998754    23345567766532  112222222 2689999999965 5543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.39  E-value=8.2e-13  Score=110.03  Aligned_cols=158  Identities=22%  Similarity=0.225  Sum_probs=98.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc-h--hhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPE-K--ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~-~--~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      ++|||||+|+||..+++.|+++| .+|+++.|+.. .  ........  .+.+++++.+|++|++++. +++.       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~-~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVA-AALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHH-HHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHH-HHHHHHHhccC
Confidence            68999999999999999999997 57999999832 1  11111111  1567899999999999888 5543       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      .++.|||+||......   ...+.....+..-+.|+.+|.++... .++.||++||+...-    .-.....|+....- 
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~----G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL----GGPGQSAYAAANAFL  156 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT----T-TTBHHHHHHHHHH
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc----cCcchHhHHHHHHHH
Confidence            5789999999864110   11111122344568899999998855 788999999997643    22344556544432 


Q ss_pred             HHHHHHHHhcCCCEEEEEccc
Q 019935          226 KMGEDFVQKSGLPFTIIRAGR  246 (333)
Q Consensus       226 ~~~e~~l~~~gi~~~~vrpg~  246 (333)
                      ....+..+..|.++.+|.-|.
T Consensus       157 da~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  157 DALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHHhCCCCEEEEEccc
Confidence            233344566799999888774

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.37  E-value=3e-12  Score=105.12  Aligned_cols=126  Identities=17%  Similarity=0.152  Sum_probs=86.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhh-------h
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-------F  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~-------~  149 (333)
                      .+++++++||||+|+||+++++.|+++|++|++++|+.+..+......  .+..+.++.+|+++.++++ ++       +
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~-~~v~~~~~~~   91 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQ-RVISITLNAF   91 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            356789999999999999999999999999999999876543322111  1345677899999988776 43       3


Q ss_pred             cCCcEEEEcCCCCCCCCCCCC-CCCCCcchhHHHHHHHHHhc-----C-------CCCCeEEEEecccc
Q 019935          150 EGVTHVICCTGTTAFPSRRWD-GDNTPEKVDWEGVRNLVSAL-----P-------SSLKRIVLVSSVGV  205 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~a~-----~-------~~~~~~v~~SS~~~  205 (333)
                      .++|++|||||........++ .......+|+.++....+.+     +       ...+||..+||.++
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            579999999997653222222 11122345566655555433     1       13468999988776

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.31  E-value=3.9e-11  Score=99.60  Aligned_cols=221  Identities=16%  Similarity=0.114  Sum_probs=136.8

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+.+|++||+|-  ...|+..|++.|.++|+++......+.-.+.+.+..+ .....+++||+++.++++ +.|      
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~-~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESID-ALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHH-HHHHHHHHh
Confidence            467899999986  4789999999999999999888876632222222111 223457899999998888 554      


Q ss_pred             -cCCcEEEEcCCCCCCC-------CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhh
Q 019935          150 -EGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                       +.+|.|||+.+...-.       +..-+.....+++...+...+.++++.   ....+|-++=.+.    +...++.+.
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs----~r~vPnYNv  157 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS----ERVVPNYNV  157 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc----eeecCCCch
Confidence             3789999999875310       001111112233344455555665543   3456776653333    224555556


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .|+.|+.     +.+...+.+.|+|++.|.-|.+- ..... ....|...+..      .....+.+..++.+||+...+
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIr-TLAas-gI~~f~~~l~~------~e~~aPl~r~vt~eeVG~tA~  229 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIR-TLAAS-GIGDFRKMLKE------NEANAPLRRNVTIEEVGNTAA  229 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchH-HHHhh-ccccHHHHHHH------HHhhCCccCCCCHHHhhhhHH
Confidence            7777653     33334445679999999998661 10000 01112122211      112345667789999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++-.  ..|++.++++|=
T Consensus       230 fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         230 FLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             HHhcchhcccccceEEEcCCc
Confidence            9999844  559999999874

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.26  E-value=1.4e-11  Score=101.74  Aligned_cols=222  Identities=18%  Similarity=0.210  Sum_probs=138.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHH-----HHHhCC----CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVA-----SLLSRN----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~-----~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~  150 (333)
                      .+.++.++-+++|+|+..|..     ++-+.+    |+|++++|.+.+.+-          ++-+.|.   .-+    ..
T Consensus        10 ~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri----------tw~el~~---~Gi----p~   72 (315)
T KOG3019|consen   10 GKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI----------TWPELDF---PGI----PI   72 (315)
T ss_pred             CccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccc----------ccchhcC---CCC----ce
Confidence            345678889999999988887     444444    899999999865532          2222221   111    12


Q ss_pred             CCcEEEEcCCCCC-CCCCCCCCC--CCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCC-ccchhh---hH
Q 019935          151 GVTHVICCTGTTA-FPSRRWDGD--NTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELP-WSIMNL---FG  220 (333)
Q Consensus       151 ~~d~vi~~a~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~-~~~~~~---~~  220 (333)
                      .||+.+|.+|... .|.+.|.+.  .+.....+..+..+++++..   -.+.+|++|..+.|...+.. +.+...   +.
T Consensus        73 sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd  152 (315)
T KOG3019|consen   73 SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFD  152 (315)
T ss_pred             ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChH
Confidence            4556666555433 233455541  11222335557788888743   34689999999998754322 222221   11


Q ss_pred             HH-H--HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHH---HHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VL-K--YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL---KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~-k--~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +. +  .+++..........++++||.|.+ -|..++. +..++   +...+    -.+|+|.++++|||++|++..+.+
T Consensus       153 ~~srL~l~WE~aA~~~~~~~r~~~iR~GvV-lG~gGGa-~~~M~lpF~~g~G----GPlGsG~Q~fpWIHv~DL~~li~~  226 (315)
T KOG3019|consen  153 ILSRLCLEWEGAALKANKDVRVALIRIGVV-LGKGGGA-LAMMILPFQMGAG----GPLGSGQQWFPWIHVDDLVNLIYE  226 (315)
T ss_pred             HHHHHHHHHHHHhhccCcceeEEEEEEeEE-EecCCcc-hhhhhhhhhhccC----CcCCCCCeeeeeeehHHHHHHHHH
Confidence            11 1  234444444445689999999955 4555442 22221   22222    246889999999999999999999


Q ss_pred             hccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++...| ++|-..       |+..+..|+++.+.+
T Consensus       227 ale~~~v~G-ViNgvA-------P~~~~n~Ef~q~lg~  256 (315)
T KOG3019|consen  227 ALENPSVKG-VINGVA-------PNPVRNGEFCQQLGS  256 (315)
T ss_pred             HHhcCCCCc-eecccC-------CCccchHHHHHHHHH
Confidence            999986645 666666       688999999988754

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.21  E-value=4.4e-12  Score=105.04  Aligned_cols=203  Identities=17%  Similarity=0.094  Sum_probs=124.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeE--EEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V--~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      +.+.+||||++.+||..++..+.+++-+.  ++..|.....+.+.... ......+.+|+++...+. +.+       ..
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~-gd~~v~~~g~~~e~~~l~-al~e~~r~k~gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY-GDDFVHVVGDITEEQLLG-ALREAPRKKGGK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe-cCCcceechHHHHHHHHH-HHHhhhhhcCCc
Confidence            45789999999999999999999887554  44445443333222111 122233344554433332 221       25


Q ss_pred             CcEEEEcCCCCCCC------CCCCCCCCCCcchhHHHHHHHHHhc----CCC--CCeEEEEeccccccCCCCCccchhhh
Q 019935          152 VTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSAL----PSS--LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       152 ~d~vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~----~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      -|+||||||.....      ..+.+....+++.|+.+...+.+-+    +..  .+-+|++||.++..    |+.....|
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~----p~~~wa~y  158 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR----PFSSWAAY  158 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc----cccHHHHh
Confidence            69999999986521      1222233457888998888877733    222  36899999999877    88888888


Q ss_pred             HHHHHHHHHH-HHH--Hhc-CCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          220 GVLKYKKMGE-DFV--QKS-GLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       220 ~~~k~k~~~e-~~l--~~~-gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +.+|..+.+- ..+  .+. ++++..++|| +++..++.-      ..+.....+.         .-......+.+.+.|
T Consensus       159 c~~KaAr~m~f~~lA~EEp~~v~vl~~aPG-vvDT~mq~~ir~~~~~~p~~l~~f~---------el~~~~~ll~~~~~a  228 (253)
T KOG1204|consen  159 CSSKAARNMYFMVLASEEPFDVRVLNYAPG-VVDTQMQVCIRETSRMTPADLKMFK---------ELKESGQLLDPQVTA  228 (253)
T ss_pred             hhhHHHHHHHHHHHhhcCccceeEEEccCC-cccchhHHHHhhccCCCHHHHHHHH---------HHHhcCCcCChhhHH
Confidence            8777653332 222  233 8899999999 667665321      1111111111         111223567777899


Q ss_pred             HHHHHhccCc
Q 019935          290 EACIQALDIE  299 (333)
Q Consensus       290 ~a~~~~l~~~  299 (333)
                      +.+..+++..
T Consensus       229 ~~l~~L~e~~  238 (253)
T KOG1204|consen  229 KVLAKLLEKG  238 (253)
T ss_pred             HHHHHHHHhc
Confidence            9999999875

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.8e-10  Score=95.18  Aligned_cols=152  Identities=13%  Similarity=0.170  Sum_probs=107.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhc-------CCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE-------GVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~-------~~d~  154 (333)
                      |+++||||+|++|. +++.|+++|++|++++|++++.+.+.... ...++.++.+|++|++++. ++++       .+|+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~-~~i~~~l~~~g~id~   78 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALK-LAIKSTIEKNGPFDL   78 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHH-HHHHHHHHHcCCCeE
Confidence            47999999987775 99999999999999999887766544322 1346788899999999888 5543       4677


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC----eEEEEeccccccCCCCCccchhhhHHHHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK----RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~----~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      +|+.+                   ...+..++..+++. +++    +|+++=.+.+..    +            + ...
T Consensus        79 lv~~v-------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~----~------------~-~~~  122 (177)
T PRK08309         79 AVAWI-------------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASD----P------------R-IPS  122 (177)
T ss_pred             EEEec-------------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCc----h------------h-hhh
Confidence            77655                   23467888888865 888    888766554421    0            1 111


Q ss_pred             HHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          230 DFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       230 ~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      ..+......+.-|..|.+..|                           ..-.|.+-+++++.++++++.+
T Consensus       123 ~~~~~~~~~~~~i~lgf~~~~---------------------------~~~rwlt~~ei~~gv~~~~~~~  165 (177)
T PRK08309        123 EKIGPARCSYRRVILGFVLED---------------------------TYSRWLTHEEISDGVIKAIESD  165 (177)
T ss_pred             hhhhhcCCceEEEEEeEEEeC---------------------------CccccCchHHHHHHHHHHHhcC
Confidence            233345678888889944321                           2236788889999999999875

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.07  E-value=1.1e-09  Score=98.64  Aligned_cols=163  Identities=19%  Similarity=0.138  Sum_probs=107.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..++++|+|+|++|.||+.++..|+.++  .++++++++....+.+  ...+........+.+|+.++. +.++++|+||
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~--Dl~~~~~~~~v~~~td~~~~~-~~l~gaDvVV   81 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA--DLSHIDTPAKVTGYADGELWE-KALRGADLVL   81 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc--chhhcCcCceEEEecCCCchH-HHhCCCCEEE
Confidence            3467799999999999999999998665  6899999843222111  100111133445667766656 6889999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccccc---------CCCCCccchhhhHHHH--H
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK---------FNELPWSIMNLFGVLK--Y  224 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~---------~~~~~~~~~~~~~~~k--~  224 (333)
                      +++|...-+.   ....+.+..|+..+.+++++++. +++++|+++|-.+..         .....+++...||.+.  +
T Consensus        82 itaG~~~~~~---~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs  158 (321)
T PTZ00325         82 ICAGVPRKPG---MTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDV  158 (321)
T ss_pred             ECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHH
Confidence            9999854221   12244678899999999998855 899999999987643         1445566667777542  1


Q ss_pred             HHHHHHHHHhcCCCEEEEEccccc
Q 019935          225 KKMGEDFVQKSGLPFTIIRAGRLT  248 (333)
Q Consensus       225 k~~~e~~l~~~gi~~~~vrpg~~~  248 (333)
                      .+.....-+..+++..-|. +.++
T Consensus       159 ~R~r~~la~~l~v~~~~V~-~~Vl  181 (321)
T PTZ00325        159 VRARKFVAEALGMNPYDVN-VPVV  181 (321)
T ss_pred             HHHHHHHHHHhCcChhheE-EEEE
Confidence            1222222234577766676 4354

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.05  E-value=6.5e-10  Score=93.54  Aligned_cols=166  Identities=19%  Similarity=0.174  Sum_probs=111.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-----eEEEEEcCcchhhhhhccC----C--CCceEEEEccCCCcCCCch---
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-----KSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDP---  146 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-----~V~~~~R~~~~~~~~~~~~----~--~~~~~~v~~D~~d~~~~~~---  146 (333)
                      +.|.+||||++++||-+|+..|++...     .+.+.+|+-+++++.-...    +  ..+++++..|+++..++..   
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            347899999999999999999998743     4666789988877653222    2  3467889999999776662   


Q ss_pred             ---hhhcCCcEEEEcCCCCCCCC------------------------------CCCCCCCCCcchhHHHHHHHHHhcC--
Q 019935          147 ---AIFEGVTHVICCTGTTAFPS------------------------------RRWDGDNTPEKVDWEGVRNLVSALP--  191 (333)
Q Consensus       147 ---~~~~~~d~vi~~a~~~~~~~------------------------------~~~~~~~~~~~~n~~~~~~l~~a~~--  191 (333)
                         ..+...|.|+.|||.+..+.                              -..++-...++.|+.|.+.+++-+.  
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence               34668999999999865332                              1233445578899999999998552  


Q ss_pred             ---CCCCeEEEEeccccccCCC-----CCccchhhhHHHHHHHHHH-------HHHHhcCCCEEEEEccccc
Q 019935          192 ---SSLKRIVLVSSVGVTKFNE-----LPWSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIIRAGRLT  248 (333)
Q Consensus       192 ---~~~~~~v~~SS~~~~~~~~-----~~~~~~~~~~~~k~k~~~e-------~~l~~~gi~~~~vrpg~~~  248 (333)
                         ..-..+|++||..+....-     .-.....+|.  .+|+...       +-+...|+...++.||.++
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~--sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYS--SSKRLTDLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcc--hhHHHHHHHHHHHhccccccchhhhcccCceee
Confidence               1223899999998754211     0011122333  2333222       2234568999999999654

>PLN00106 malate dehydrogenase

Probab=98.87  E-value=6.2e-09  Score=93.81  Aligned_cols=157  Identities=17%  Similarity=0.136  Sum_probs=102.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|+|+|++|.||+.++..|+..+  .+++++++++...+.+  ...+........|+.+.+++. +.++++|+|||+||
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~--Dl~~~~~~~~i~~~~~~~d~~-~~l~~aDiVVitAG   95 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA--DVSHINTPAQVRGFLGDDQLG-DALKGADLVIIPAG   95 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc--hhhhCCcCceEEEEeCCCCHH-HHcCCCCEEEEeCC
Confidence            589999999999999999999766  4899999877222111  100111222334554555677 78999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccccc---------CCCCCccchhhhHHHHH--HHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK---------FNELPWSIMNLFGVLKY--KKMG  228 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~---------~~~~~~~~~~~~~~~k~--k~~~  228 (333)
                      ....+...   ..+....|...+.++.++++. +..++|+++|--+.+         ....++++...||..+.  .+..
T Consensus        96 ~~~~~g~~---R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~  172 (323)
T PLN00106         96 VPRKPGMT---RDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRAN  172 (323)
T ss_pred             CCCCCCCC---HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHH
Confidence            86433222   234678899999999997754 888999998876642         13345556666665431  2222


Q ss_pred             HHHHHhcCCCEEEEEcc
Q 019935          229 EDFVQKSGLPFTIIRAG  245 (333)
Q Consensus       229 e~~l~~~gi~~~~vrpg  245 (333)
                      ..+.+..|++...|.--
T Consensus       173 ~~lA~~lgv~~~~V~~~  189 (323)
T PLN00106        173 TFVAEKKGLDPADVDVP  189 (323)
T ss_pred             HHHHHHhCCChhheEEE
Confidence            23334456666665443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.86  E-value=3.5e-08  Score=89.86  Aligned_cols=81  Identities=16%  Similarity=0.145  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHhCCCeEEEEEcCcch---------------hhhhhccCCCCceEEEEccCCCcC
Q 019935           80 SSSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPEK---------------ATTLFGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~R~~~~---------------~~~~~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ..+|++||||+++++|.+  +++.| +.|++|+++++..++               ........ +..+..+.+|+++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHH
Confidence            346899999999999999  89999 999999988853211               11111111 344677899999988


Q ss_pred             CCch------hhhcCCcEEEEcCCCC
Q 019935          143 DLDP------AIFEGVTHVICCTGTT  162 (333)
Q Consensus       143 ~~~~------~~~~~~d~vi~~a~~~  162 (333)
                      ++++      +.++++|+||||++..
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            8762      2245799999999976

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.78  E-value=1.5e-08  Score=92.49  Aligned_cols=78  Identities=22%  Similarity=0.252  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++|||.|+ |+||+.++..|+++| .+|++.+|+.++..++.... ..+++.++.|+.|.+++. +++.+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-~~~v~~~~vD~~d~~al~-~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-GGKVEALQVDAADVDALV-ALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-cccceeEEecccChHHHH-HHHhcCCEEEEeCC
Confidence            468999998 999999999999998 99999999998888776443 348999999999999999 89999999999997


Q ss_pred             CC
Q 019935          161 TT  162 (333)
Q Consensus       161 ~~  162 (333)
                      ..
T Consensus        78 ~~   79 (389)
T COG1748          78 PF   79 (389)
T ss_pred             ch
Confidence            64

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.65  E-value=4.6e-08  Score=82.37  Aligned_cols=83  Identities=23%  Similarity=0.212  Sum_probs=66.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++++++++|+||+|++|+.+++.|++.|++|++++|+.++.+.+..... ..+..+..+|+.+.+++. +.+.++|+||+
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~diVi~  103 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARA-AAIKGADVVFA  103 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHH-HHHhcCCEEEE
Confidence            4567899999999999999999999999999999999887766543221 123456667888888777 78889999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +....
T Consensus       104 at~~g  108 (194)
T cd01078         104 AGAAG  108 (194)
T ss_pred             CCCCC
Confidence            77543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK09620 hypothetical protein; Provisional

Probab=98.60  E-value=5.8e-08  Score=83.43  Aligned_cols=81  Identities=19%  Similarity=0.297  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCC----------------ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCC
Q 019935           81 SSKLVLVAGGS----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        81 ~~~~vlVtGat----------------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~  144 (333)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++..........  ....+..+.+|....+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~--~~~~~~~V~s~~d~~~~l   79 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN--NQLELHPFEGIIDLQDKM   79 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC--CceeEEEEecHHHHHHHH
Confidence            57899999886                999999999999999999999864321111000  012334455533223456


Q ss_pred             chhhhc--CCcEEEEcCCCCCC
Q 019935          145 DPAIFE--GVTHVICCTGTTAF  164 (333)
Q Consensus       145 ~~~~~~--~~d~vi~~a~~~~~  164 (333)
                      . +.+.  ++|+|||+|+...+
T Consensus        80 ~-~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         80 K-SIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             H-HHhcccCCCEEEECccccce
Confidence            6 6664  68999999998653

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.58  E-value=1.8e-07  Score=84.78  Aligned_cols=114  Identities=14%  Similarity=0.097  Sum_probs=73.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-------CeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      .+|+||||+|++|++++..|+..+       .+|+++++++..  .+.......+. ......|+....++. +.++++|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~-~~l~~aD   80 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-AFPLLKSVVATTDPE-EAFKDVD   80 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-cccccCCceecCCHH-HHhCCCC
Confidence            479999999999999999999854       589999996532  22111000000 001123554455666 6789999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CC-eEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~-~~v~~S  201 (333)
                      +|||+||....+   .....+.++.|+.-...+.+.++. . -. .+|.+|
T Consensus        81 iVI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          81 VAILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             EEEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            999999985421   222355778898888888876643 2 23 455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.57  E-value=1.2e-07  Score=81.71  Aligned_cols=72  Identities=10%  Similarity=0.212  Sum_probs=50.0

Q ss_pred             EEE-cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC--cCCCchhhhcCCcEEEEcCCCC
Q 019935           86 LVA-GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        86 lVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d--~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      .|| .+||++|++|+++|+++|++|++++|+..... .    ...+++++.++-.+  .+.+. +.+.++|+||||||..
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~----~~~~v~~i~v~s~~~m~~~l~-~~~~~~DivIh~AAvs   92 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E----PHPNLSIIEIENVDDLLETLE-PLVKDHDVLIHSMAVS   92 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-C----CCCCeEEEEEecHHHHHHHHH-HHhcCCCEEEeCCccC
Confidence            344 67889999999999999999999988643211 0    02356666544322  13344 5567899999999986


Q ss_pred             C
Q 019935          163 A  163 (333)
Q Consensus       163 ~  163 (333)
                      .
T Consensus        93 d   93 (229)
T PRK06732         93 D   93 (229)
T ss_pred             C
Confidence            4

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.52  E-value=1.6e-07  Score=87.71  Aligned_cols=76  Identities=30%  Similarity=0.503  Sum_probs=62.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhCC-C-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRN-I-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g-~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|.|+ |++|+.+++.|++.+ . +|++.+|+.++++++.......++++++.|+.|.+++. ++++++|+|||+++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~-~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLA-ELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHH-HHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHH-HHHhcCCEEEECCccc
Confidence            789999 999999999999986 4 89999999999888765434778999999999999998 8999999999999863

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.46  E-value=7e-07  Score=80.62  Aligned_cols=116  Identities=22%  Similarity=0.193  Sum_probs=76.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHh-C--CCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLS-R--NIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~-~--g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      |+|+|+||+|.+|++++..|.. .  ++++++++|++. .....-.... .....+.+  .+.+++. +.+.++|+||.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~--~~~~d~~-~~l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKG--FSGEDPT-PALEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEE--eCCCCHH-HHcCCCCEEEEc
Confidence            5899999999999999998855 2  468888888753 2111000001 11122233  2234444 567889999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccc
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGV  205 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~  205 (333)
                      +|..+-+   .....+.+..|......++++++. +.+++|.+.|--+
T Consensus        77 aG~~~~~---~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         77 AGVARKP---GMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence            9986422   122345677899999999998854 7888888776544

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.45  E-value=4.7e-07  Score=80.99  Aligned_cols=83  Identities=17%  Similarity=0.106  Sum_probs=64.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc---chhhhhhccCC--CCceEEEEccCCCcCCCchhhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~---~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ..++++++|+|| |++|++++..|++.|++ |++++|+.   ++.+++.+...  ...+.+...|+.+.+++. +.+..+
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~-~~~~~~  200 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLK-AEIASS  200 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHH-hhhccC
Confidence            356789999998 89999999999999986 99999986   55555433221  234556678888877777 677889


Q ss_pred             cEEEEcCCCCC
Q 019935          153 THVICCTGTTA  163 (333)
Q Consensus       153 d~vi~~a~~~~  163 (333)
                      |+||||.....
T Consensus       201 DilINaTp~Gm  211 (289)
T PRK12548        201 DILVNATLVGM  211 (289)
T ss_pred             CEEEEeCCCCC
Confidence            99999987654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.37  E-value=5.8e-06  Score=76.60  Aligned_cols=180  Identities=14%  Similarity=0.180  Sum_probs=104.7

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC
Q 019935           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        79 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ++++++||||||                ||.+|.+++++|..+|++|+++.++....  .     ..++  ...|+.+.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~-----~~~~--~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--T-----PPGV--KSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--C-----CCCc--EEEEeccHH
Confidence            467899999999                35699999999999999999998765321  0     2222  457888877


Q ss_pred             CCchhhh----cCCcEEEEcCCCCCCCC-CC----CCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCC
Q 019935          143 DLDPAIF----EGVTHVICCTGTTAFPS-RR----WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       143 ~~~~~~~----~~~d~vi~~a~~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~  212 (333)
                      ++.++.+    .++|++|+|||+..+.. ..    .......+.+++.-+..+++.+++ .-+++ .++    +..+...
T Consensus       253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~-lvg----F~aEt~~  327 (390)
T TIGR00521       253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQV-IVG----FKAETND  327 (390)
T ss_pred             HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcE-EEE----EEcCCCc
Confidence            7721333    46899999999975421 11    111122344666667777775543 11232 222    2222100


Q ss_pred             ccchhhhHHHHHHHHHHHHHHhcCCCEEEEEcccc-cCCCCCCcchHHHHHHhhcccceeec-CCCCcccccccHHHHHH
Q 019935          213 WSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRL-TDGPYTSYDLNTLLKATAGERRAVLM-GQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       213 ~~~~~~~~~~k~k~~~e~~l~~~gi~~~~vrpg~~-~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~  290 (333)
                          +      ....+.+-+++.++++++.-.-.- .+|..              .....++ .++.......+=+++|+
T Consensus       328 ----~------l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~--------------~n~~~li~~~~~~~~~~~~K~~iA~  383 (390)
T TIGR00521       328 ----D------LIKYAKEKLKKKNLDMIVANDVSQRGFGSD--------------ENEVYIFSKHGHKELPLMSKLEVAE  383 (390)
T ss_pred             ----H------HHHHHHHHHHHcCCCEEEEccCCccccCCC--------------CcEEEEEECCCeEEeCCCCHHHHHH
Confidence                0      234456667788999887664311 01111              1122222 22223344566789999


Q ss_pred             HHHHhc
Q 019935          291 ACIQAL  296 (333)
Q Consensus       291 a~~~~l  296 (333)
                      .+++.+
T Consensus       384 ~i~~~~  389 (390)
T TIGR00521       384 RILDEI  389 (390)
T ss_pred             HHHHHh
Confidence            888764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.37  E-value=1.2e-06  Score=69.07  Aligned_cols=78  Identities=27%  Similarity=0.342  Sum_probs=60.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++++++++|.|+ |+.|+.++..|.+.|.+ |++++|+.++++.+.+......+.++..+     ++. +.+..+|+||+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~-~~~~~~DivI~   81 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLE-EALQEADIVIN   81 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHC-HHHHTESEEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHH-HHHhhCCeEEE
Confidence            567889999996 99999999999999976 99999999998887665433445554433     344 56788999999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.+...
T Consensus        82 aT~~~~   87 (135)
T PF01488_consen   82 ATPSGM   87 (135)
T ss_dssp             -SSTTS
T ss_pred             ecCCCC
Confidence            987653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.37  E-value=6.2e-07  Score=83.33  Aligned_cols=77  Identities=18%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC
Q 019935           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        79 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ++.+++||||||                +|.+|.+++++|+++|++|++++++.+ ...      ..+  +...|+++.+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~------~~~--~~~~dv~~~~  255 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT------PAG--VKRIDVESAQ  255 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC------CCC--cEEEccCCHH
Confidence            467899999999                888999999999999999999998752 110      112  2356888877


Q ss_pred             CCch---hhhcCCcEEEEcCCCCCC
Q 019935          143 DLDP---AIFEGVTHVICCTGTTAF  164 (333)
Q Consensus       143 ~~~~---~~~~~~d~vi~~a~~~~~  164 (333)
                      ++.+   +.++++|++|||||+..+
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEccccccc
Confidence            7662   224579999999998653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.31  E-value=3.6e-07  Score=78.68  Aligned_cols=68  Identities=12%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             EEE-cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCCcEEEEc
Q 019935           86 LVA-GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGVTHVICC  158 (333)
Q Consensus        86 lVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~d~vi~~  158 (333)
                      .|| .++|+||++++++|+++|++|+++++... ...      ..   ...+|+.+.+++.+      +.++++|++|||
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~------~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LKP------EP---HPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-ccc------cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            344 45899999999999999999999876321 110      01   13468877666551      224578999999


Q ss_pred             CCCCC
Q 019935          159 TGTTA  163 (333)
Q Consensus       159 a~~~~  163 (333)
                      ||...
T Consensus        88 Agv~d   92 (227)
T TIGR02114        88 MAVSD   92 (227)
T ss_pred             CEecc
Confidence            99754

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.29  E-value=1.1e-06  Score=79.48  Aligned_cols=73  Identities=21%  Similarity=0.259  Sum_probs=56.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhC-C-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ++.+++|+||||+|+||+.++++|+.+ | .+++++.|+..+...+..+.       ..+|+.   ++. +.+.++|+||
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el-------~~~~i~---~l~-~~l~~aDiVv  220 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL-------GGGKIL---SLE-EALPEADIVV  220 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh-------ccccHH---hHH-HHHccCCEEE
Confidence            567899999999999999999999865 5 68999999887776654321       123433   355 6788999999


Q ss_pred             EcCCCC
Q 019935          157 CCTGTT  162 (333)
Q Consensus       157 ~~a~~~  162 (333)
                      |+++..
T Consensus       221 ~~ts~~  226 (340)
T PRK14982        221 WVASMP  226 (340)
T ss_pred             ECCcCC
Confidence            999864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.25  E-value=2.2e-06  Score=74.79  Aligned_cols=74  Identities=14%  Similarity=0.221  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+|||+||||. |+.|++.|.+.|++|++..+++...+.+.    ..+...+..+..|.+++. +.+.  ++|+||+++.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g~~~v~~g~l~~~~l~-~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQALTVHTGALDPQELR-EFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccCCceEEECCCCHHHHH-HHHHhcCCCEEEEcCC
Confidence            47999999999 99999999999999999999886655443    223344556667777776 6664  6999999987


Q ss_pred             CC
Q 019935          161 TT  162 (333)
Q Consensus       161 ~~  162 (333)
                      +.
T Consensus        75 Pf   76 (256)
T TIGR00715        75 PF   76 (256)
T ss_pred             HH
Confidence            64

This enzyme was found to be a monomer by gel filtration.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.17  E-value=1.6e-06  Score=76.95  Aligned_cols=79  Identities=20%  Similarity=0.311  Sum_probs=66.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHh----CCCeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      -++|.||+||.|.++++++.+    .|...-+..|+++++++.++...      .....++.+|.+|++++. +..+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~-emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLD-EMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHH-HHHhhhE
Confidence            489999999999999999999    68889999999999877654321      122338899999999999 8889999


Q ss_pred             EEEEcCCCCC
Q 019935          154 HVICCTGTTA  163 (333)
Q Consensus       154 ~vi~~a~~~~  163 (333)
                      +|+||+|+..
T Consensus        86 vivN~vGPyR   95 (423)
T KOG2733|consen   86 VIVNCVGPYR   95 (423)
T ss_pred             EEEeccccce
Confidence            9999999864

>cd00704 MDH Malate dehydrogenase

Probab=98.16  E-value=9.8e-06  Score=73.44  Aligned_cols=93  Identities=17%  Similarity=0.135  Sum_probs=65.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-------CeEEEEEcCc--chhhhhhccCCCCceEEEEccCCCc-----------CC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-----------KD  143 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~-----------~~  143 (333)
                      +|.|+||+|.+|+.++..|+..|       ++++++++++  +..+            ....|+.|.           ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~------------g~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE------------GVVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc------------eeeeehhhhcccccCCcEEecC
Confidence            69999999999999999999765       2589999876  3222            223344443           23


Q ss_pred             CchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC
Q 019935          144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS  192 (333)
Q Consensus       144 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  192 (333)
                      .. +.++++|+|||+||...-+   ...-.+.++.|..-...+...++.
T Consensus        70 ~~-~~~~~aDiVVitAG~~~~~---g~tR~dll~~N~~i~~~i~~~i~~  114 (323)
T cd00704          70 PE-EAFKDVDVAILVGAFPRKP---GMERADLLRKNAKIFKEQGEALNK  114 (323)
T ss_pred             hH-HHhCCCCEEEEeCCCCCCc---CCcHHHHHHHhHHHHHHHHHHHHH
Confidence            34 6788999999999975422   223345677788888888887643

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.11  E-value=1.5e-05  Score=73.79  Aligned_cols=103  Identities=22%  Similarity=0.287  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++|.|.||||++|..+++.|+++ +++|..+.++.+..+.+.    .....+...|+.+.++++...++++|+||.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~----~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al  112 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFG----SVFPHLITQDLPNLVAVKDADFSDVDAVFCCL  112 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCch----hhCccccCccccceecCCHHHhcCCCEEEEcC
Confidence            5569999999999999999999998 689999988654433222    11122334566555555523368899999987


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +.                   .....++.+++.+ .++|-+|+..-+.
T Consensus       113 p~-------------------~~s~~i~~~~~~g-~~VIDlSs~fRl~  140 (381)
T PLN02968        113 PH-------------------GTTQEIIKALPKD-LKIVDLSADFRLR  140 (381)
T ss_pred             CH-------------------HHHHHHHHHHhCC-CEEEEcCchhccC
Confidence            53                   1456666665544 5899888887554

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.07  E-value=9.6e-06  Score=73.45  Aligned_cols=166  Identities=13%  Similarity=0.118  Sum_probs=94.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcch--hhhhhccCCCCceEEE-EccCCCcCCCchhhhcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~--~~~~~~~~~~~~~~~v-~~D~~d~~~~~~~~~~~  151 (333)
                      .++|.|+|++|.+|..++..|+..|.       ++++++.++..  ++.......+....+. ...+.  .... +.+.+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~-~~~~d   78 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPN-VAFKD   78 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcH-HHhCC
Confidence            35899999999999999999998873       79999985432  3222111101100000 00111  1123 56789


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-C-eEEEEeccc---c-ccCCCC-CccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-K-RIVLVSSVG---V-TKFNEL-PWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~-~~v~~SS~~---~-~~~~~~-~~~~~~~~~~~k  223 (333)
                      +|+||.+||...-+   ...-.+.+..|..-...+.+.++. +- . .+|.+|-..   + +-.... .+++...||.++
T Consensus        79 aDivvitaG~~~k~---g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~  155 (322)
T cd01338          79 ADWALLVGAKPRGP---GMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTR  155 (322)
T ss_pred             CCEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehH
Confidence            99999999975322   222345677888888888887744 32 3 455554211   0 001223 366666777643


Q ss_pred             H--HHHHHHHHHhcCCCEEEEEcccccCCCCCC
Q 019935          224 Y--KKMGEDFVQKSGLPFTIIRAGRLTDGPYTS  254 (333)
Q Consensus       224 ~--k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~  254 (333)
                      .  .+....+-+..|++...++...+ +|+.+.
T Consensus       156 LDs~Rl~~~la~~lgv~~~~v~~~~V-~GeHG~  187 (322)
T cd01338         156 LDHNRAKSQLAKKAGVPVTDVKNMVI-WGNHSP  187 (322)
T ss_pred             HHHHHHHHHHHHHhCcChhHeEEEEE-EeCCcc
Confidence            2  23333333556888888887533 566543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.05  E-value=2e-05  Score=67.75  Aligned_cols=76  Identities=25%  Similarity=0.390  Sum_probs=63.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+++|.|+ |.+|+.+++.|.++|++|++++++++..++....  ....+++.+|-+|++.|++.-+.++|++|-..+-
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~--~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD--ELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh--hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            47888885 9999999999999999999999999888774421  2567889999999999994347899999988763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.00  E-value=3.3e-05  Score=70.06  Aligned_cols=104  Identities=15%  Similarity=0.121  Sum_probs=69.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC-----------CCc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-----------DLD  145 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~-----------~~~  145 (333)
                      +|.|+|++|.+|++++..|+..|.       +++++++++...          ..+....|+.|..           ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence            589999999999999999998552       599999865421          1122234444433           223


Q ss_pred             hhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CC-eEEEEe
Q 019935          146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVS  201 (333)
Q Consensus       146 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~-~~v~~S  201 (333)
                       +.+.++|+||++||...-   ......+.+..|+.-...+.+.++. . -. .+|.+|
T Consensus        71 -~~~~~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        71 -VAFTDVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             -HHhCCCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence             568899999999997532   1222345677898888888887744 2 33 444444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.94  E-value=8.2e-06  Score=64.84  Aligned_cols=107  Identities=13%  Similarity=0.125  Sum_probs=69.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +||.|+|++|.+|++++..|...+  .+++++++++++.+.......      .....+..       ... +.++++|+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-------~~~-~~~~~aDi   72 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-------GDY-EALKDADI   72 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-------SSG-GGGTTESE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-------ccc-cccccccE
Confidence            489999999999999999999986  589999999766544321110      11122221       122 45678999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEE
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLV  200 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~  200 (333)
                      ||.+||...-+   .....+.++.|..-...+.+.+++ +-+ .|+.+
T Consensus        73 vvitag~~~~~---g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivv  117 (141)
T PF00056_consen   73 VVITAGVPRKP---GMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVV  117 (141)
T ss_dssp             EEETTSTSSST---TSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-
T ss_pred             EEEeccccccc---cccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEe
Confidence            99999975422   122344567788888888886643 333 44443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.87  E-value=0.00013  Score=59.50  Aligned_cols=66  Identities=23%  Similarity=0.264  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |++|.+.| .|-+|+.+++.|+++|++|++++|++++.+.+..    .+++.       .++.. ++.+++|+||-+..
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~g~~~-------~~s~~-e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE----AGAEV-------ADSPA-EAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH----TTEEE-------ESSHH-HHHHHBSEEEE-SS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH----hhhhh-------hhhhh-hHhhcccceEeecc
Confidence            46899999 5999999999999999999999999988888763    23332       23555 67778899999874

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.79  E-value=5.7e-05  Score=72.09  Aligned_cols=77  Identities=21%  Similarity=0.246  Sum_probs=56.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++++|+|+|+|+++ +|..+++.|+++|++|++++++. +..+.........++.++.+|..+      +.++++|+||+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~d~vv~   74 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------EFLEGVDLVVV   74 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------hHhhcCCEEEE
Confidence            35678999999866 99999999999999999999975 223222111113356777888765      23467999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      ++|..
T Consensus        75 ~~g~~   79 (450)
T PRK14106         75 SPGVP   79 (450)
T ss_pred             CCCCC
Confidence            99864

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.78  E-value=4.7e-05  Score=58.21  Aligned_cols=71  Identities=31%  Similarity=0.460  Sum_probs=59.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|.|. |.+|+.+++.|.+.+.+|++++++++..+.+.    ..++.++.+|.+|++.+++.-+++++.||-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcccccccccchhhhHHhhcCccccCEEEEccC
Confidence            578885 79999999999997779999999998887776    445889999999999998556788999988774

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.78  E-value=8.4e-05  Score=66.19  Aligned_cols=77  Identities=21%  Similarity=0.248  Sum_probs=55.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ...+++++|+|+ |++|++++..|+..| .+|++++|+.++.+.+.+......  .+..++    ... +.+.++|+|||
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~~~----~~~-~~~~~~DivIn  191 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAELDL----ELQ-EELADFDLIIN  191 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceeecc----cch-hccccCCEEEE
Confidence            456789999996 999999999999999 799999999988877654331111  011111    233 45577999999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.....
T Consensus       192 aTp~g~  197 (278)
T PRK00258        192 ATSAGM  197 (278)
T ss_pred             CCcCCC
Confidence            987654

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.75  E-value=2.3e-05  Score=69.10  Aligned_cols=77  Identities=22%  Similarity=0.286  Sum_probs=62.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      ..++|-||+||.|.-++++|+++|.+-.+..|+..+...+.... +..+...  ++-+++.++ +...+.++|+||+|+.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-G~~~~~~--p~~~p~~~~-~~~~~~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-GPEAAVF--PLGVPAALE-AMASRTQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-Ccccccc--CCCCHHHHH-HHHhcceEEEeccccc
Confidence            46999999999999999999999998888899999988776543 3444333  444477888 8889999999999986


Q ss_pred             C
Q 019935          163 A  163 (333)
Q Consensus       163 ~  163 (333)
                      .
T Consensus        83 t   83 (382)
T COG3268          83 T   83 (382)
T ss_pred             c
Confidence            4

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.74  E-value=0.00016  Score=74.46  Aligned_cols=78  Identities=21%  Similarity=0.128  Sum_probs=63.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCe-------------EEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIK-------------SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD  145 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~-------------V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~  145 (333)
                      ..+++|+|.|+ |++|+.+++.|++. +++             |.+.+++.+.++.+.+.  .++++.+..|+.|.+++.
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~--~~~~~~v~lDv~D~e~L~  643 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG--IENAEAVQLDVSDSESLL  643 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh--cCCCceEEeecCCHHHHH
Confidence            34679999996 99999999999876 344             78888888777766543  236778999999999888


Q ss_pred             hhhhcCCcEEEEcCCC
Q 019935          146 PAIFEGVTHVICCTGT  161 (333)
Q Consensus       146 ~~~~~~~d~vi~~a~~  161 (333)
                       +.++++|+||++...
T Consensus       644 -~~v~~~DaVIsalP~  658 (1042)
T PLN02819        644 -KYVSQVDVVISLLPA  658 (1042)
T ss_pred             -HhhcCCCEEEECCCc
Confidence             778899999999865

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.70  E-value=7.6e-05  Score=71.27  Aligned_cols=73  Identities=21%  Similarity=0.303  Sum_probs=61.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-hcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-~~~~d~vi~~a~  160 (333)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++++++..+.+..   ..++.++.+|.++++.++ ++ +.++|+||.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~---~~~~~~~~gd~~~~~~l~-~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD---RLDVRTVVGNGSSPDVLR-EAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh---hcCEEEEEeCCCCHHHHH-HcCCCcCCEEEEecC
Confidence            47999997 999999999999999999999999988776642   246889999999988887 55 778999888764

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.62  E-value=8.1e-05  Score=61.77  Aligned_cols=66  Identities=11%  Similarity=0.209  Sum_probs=39.6

Q ss_pred             cCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhhcCCcEEEEcCCCCC
Q 019935           89 GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVICCTGTTA  163 (333)
Q Consensus        89 GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~~~~d~vi~~a~~~~  163 (333)
                      -.||..|.+|+++++.+|++|+++..... ...      ..++..+..+  ..+++.+   +.+...|++|++|++..
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~------p~~~~~i~v~--sa~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP------PPGVKVIRVE--SAEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEEEE-S--SHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc------cccceEEEec--chhhhhhhhccccCcceeEEEecchhh
Confidence            34899999999999999999999988732 110      3356655543  3222221   44567899999999865

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.60  E-value=0.00017  Score=65.12  Aligned_cols=116  Identities=19%  Similarity=0.172  Sum_probs=68.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc--chhhhhhccCCCCc-eEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDP--EKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~--~~~~~~~~~~~~~~-~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++|.|+|++|.+|..++..|+..|+  +|++++|++  ++++.......+.- ..-...++.-..+.  +.+.++|+||.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~--~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL--SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH--HHhCCCCEEEE
Confidence            4899999999999999999999985  599999954  33322111000000 00000011111122  34789999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEecc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSV  203 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~  203 (333)
                      ++|...-+   .....+.+..|..-...+++.+.. +. ..+|.+++.
T Consensus        79 tag~p~~~---~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          79 TAGVPRKE---GMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             ecCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99874311   112234566787888888876643 22 356666653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.57  E-value=0.0002  Score=64.67  Aligned_cols=107  Identities=16%  Similarity=0.175  Sum_probs=70.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ++|.|.|+ |.+|+.++..|+..|  ++|++++|++++.+.......      .....+...      ..  +.+.++|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~------~~--~~l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG------DY--SDCKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC------CH--HHhCCCCE
Confidence            37999995 999999999999998  689999999887665433211      111122111      12  33678999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ||+++|...-   ....-.+.+..|..-...+.+.+++ +- ..++.+|
T Consensus        72 VIitag~~~~---~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          72 VVITAGAPQK---PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEEccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999987532   1222244667788888888887644 32 3555555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.57  E-value=0.0002  Score=57.76  Aligned_cols=75  Identities=24%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++|+|+|+ |.+|+.+++.|++.| ++|++++|++++.+.+.......   .+..+..+   .. +.++++|+||++
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~---~~~~~~~~---~~-~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL---GIAIAYLD---LE-ELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc---ccceeecc---hh-hccccCCEEEeC
Confidence            34578999997 999999999999996 88999999987776654322111   01123322   33 346789999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus        89 ~~~~   92 (155)
T cd01065          89 TPVG   92 (155)
T ss_pred             cCCC
Confidence            9764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.54  E-value=0.00021  Score=68.30  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+...  ..++.++.+|.++++.+++..++++|+||-+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            44688999997 9999999999999999999999999877766532  34678899999999888745567899998665

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.52  E-value=0.00028  Score=64.55  Aligned_cols=70  Identities=27%  Similarity=0.304  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +++|+|.||||++|+.+++.|.++||   +++.+.+..+..+.+.    ..+..+...|+.+      ..+.++|+||.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~----~~g~~i~v~d~~~------~~~~~vDvVf~A   70 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS----FKGKELKVEDLTT------FDFSGVDIALFS   70 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee----eCCceeEEeeCCH------HHHcCCCEEEEC
Confidence            35899999999999999999999876   4577877654443332    1122333344432      123467777776


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      ++.
T Consensus        71 ~g~   73 (334)
T PRK14874         71 AGG   73 (334)
T ss_pred             CCh
Confidence            654

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.52  E-value=0.00033  Score=63.45  Aligned_cols=110  Identities=15%  Similarity=0.185  Sum_probs=72.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ..+++|.|+|+ |.+|+.++..|+..|.  ++++++++.++++.......+     .++.+. .     +.+  +.++++
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~-----~~~--~~~~~a   74 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A-----GDY--SDCKDA   74 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e-----CCH--HHhCCC
Confidence            34579999998 9999999999999885  799999987765443221111     122222 1     123  347899


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEe
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS  201 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~S  201 (333)
                      |+||..||...-+   .....+.+..|..-...+++.++. +.+ .++.+|
T Consensus        75 divIitag~~~k~---g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         75 DLVVITAGAPQKP---GETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             CEEEEecCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999999975322   222345677788888888876643 433 455544

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.49  E-value=0.00034  Score=62.00  Aligned_cols=75  Identities=21%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++++|+|+ |++|++++..|++.|++|++++|+.++.+.+.+.... ..+..+  +..+      ..+.++|+|||+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~------~~~~~~DivIna  185 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE------LPLHRVDLIINA  185 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh------hcccCccEEEEC
Confidence            45679999997 8999999999999999999999998877766543211 112221  1111      123468999999


Q ss_pred             CCCCC
Q 019935          159 TGTTA  163 (333)
Q Consensus       159 a~~~~  163 (333)
                      .+...
T Consensus       186 tp~gm  190 (270)
T TIGR00507       186 TSAGM  190 (270)
T ss_pred             CCCCC
Confidence            98753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.45  E-value=0.00046  Score=62.89  Aligned_cols=98  Identities=20%  Similarity=0.231  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhhc--CCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFE--GVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~~--~~d~vi  156 (333)
                      +.+|||+||+|++|+..++.+.+.|+.+++.+.+.++.+.+.+.    +... ..|..+.+ +.+   +...  ++|+|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~l----GAd~-vi~y~~~~-~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKEL----GADH-VINYREED-FVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhc----CCCE-EEcCCccc-HHHHHHHHcCCCCceEEE
Confidence            68999999999999999999999998877777777666633322    2211 12333333 331   2222  699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +..|..                   .....+++++.+ ++++.+...+.
T Consensus       217 D~vG~~-------------------~~~~~l~~l~~~-G~lv~ig~~~g  245 (326)
T COG0604         217 DTVGGD-------------------TFAASLAALAPG-GRLVSIGALSG  245 (326)
T ss_pred             ECCCHH-------------------HHHHHHHHhccC-CEEEEEecCCC
Confidence            998752                   123456666666 78998887764

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.43  E-value=0.00086  Score=61.29  Aligned_cols=78  Identities=26%  Similarity=0.299  Sum_probs=54.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc---------------------hhhh----hhccCCCCceE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATT----LFGKQDEETLQ  132 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~---------------------~~~~----~~~~~~~~~~~  132 (333)
                      .++.++|+|.|+ |++|+++++.|++.|. ++++++++.-                     +.+.    +.+..+.-.++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            456678999995 8899999999999996 7888888641                     1111    11111233456


Q ss_pred             EEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935          133 VCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       133 ~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      .+..|++. +.++ ++++++|+||.+.
T Consensus       100 ~~~~~~~~-~~~~-~~~~~~DlVid~~  124 (338)
T PRK12475        100 PVVTDVTV-EELE-ELVKEVDLIIDAT  124 (338)
T ss_pred             EEeccCCH-HHHH-HHhcCCCEEEEcC
Confidence            66677753 4566 7788999999987

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.38  E-value=0.00065  Score=61.60  Aligned_cols=105  Identities=13%  Similarity=0.084  Sum_probs=64.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      -+|.|+|++|++|++++..|+..|.       ++++++.++  ++++.......+...... .+..-..... +.++++|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~~~~~-~~~~daD   81 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLL-AGVVATTDPE-EAFKDVD   81 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccccc-CCcEEecChH-HHhCCCC
Confidence            4899999999999999999998873       799999864  223222111101110000 0110001122 4678999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS  192 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  192 (333)
                      +||.+||...-   ....-.+.+..|..-...+.+.++.
T Consensus        82 vVVitAG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~  117 (323)
T TIGR01759        82 AALLVGAFPRK---PGMERADLLSKNGKIFKEQGKALNK  117 (323)
T ss_pred             EEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            99999997532   2223345677788888888887644

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.38  E-value=0.00086  Score=61.29  Aligned_cols=108  Identities=20%  Similarity=0.223  Sum_probs=67.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc---------------------hhhhh----hccCCCCceE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTL----FGKQDEETLQ  132 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~---------------------~~~~~----~~~~~~~~~~  132 (333)
                      .+...+|+|.|+ |++|++++..|+..|. ++++++++.-                     +.+..    .+..+.-.++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            456678999996 9999999999999996 8999998631                     11111    1111123355


Q ss_pred             EEEccCCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       133 ~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      .+..|++. +.+. +++++.|+||.+..                  |...-..+.+++...-..+|+.++.+.+|
T Consensus       100 ~~~~~~~~-~~~~-~~~~~~DlVid~~D------------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G  154 (339)
T PRK07688        100 AIVQDVTA-EELE-ELVTGVDLIIDATD------------------NFETRFIVNDAAQKYGIPWIYGACVGSYG  154 (339)
T ss_pred             EEeccCCH-HHHH-HHHcCCCEEEEcCC------------------CHHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence            56666643 3455 67889999999863                  22223344455543234677766655444

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.37  E-value=0.00078  Score=55.77  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=65.0

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ...+.+++|.|.| .|.||+++++.|...|.+|++++|+........    ...+        ...+++ +++..+|+|+
T Consensus        31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~----~~~~--------~~~~l~-ell~~aDiv~   96 (178)
T PF02826_consen   31 GRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD----EFGV--------EYVSLD-ELLAQADIVS   96 (178)
T ss_dssp             BS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH----HTTE--------EESSHH-HHHHH-SEEE
T ss_pred             ccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc----cccc--------eeeehh-hhcchhhhhh
Confidence            4467789999999 699999999999999999999999886654211    1111        234677 7888999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      .+.....       ....++  |    ...++.++.|. .||+++-...
T Consensus        97 ~~~plt~-------~T~~li--~----~~~l~~mk~ga-~lvN~aRG~~  131 (178)
T PF02826_consen   97 LHLPLTP-------ETRGLI--N----AEFLAKMKPGA-VLVNVARGEL  131 (178)
T ss_dssp             E-SSSST-------TTTTSB--S----HHHHHTSTTTE-EEEESSSGGG
T ss_pred             hhhcccc-------ccceee--e----eeeeeccccce-EEEeccchhh
Confidence            9886532       101111  1    44556666543 6777664444

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.36  E-value=0.00056  Score=61.88  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=34.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~  121 (333)
                      ++|.|+| .|.+|..++..|+++|++|++++|+++..+.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~   40 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA   40 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence            4799999 7999999999999999999999999865543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.35  E-value=0.00083  Score=60.49  Aligned_cols=113  Identities=20%  Similarity=0.195  Sum_probs=69.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCC--ceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEE--TLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~--~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|.|+|++|.+|++++..|+..|  .++++++.+  +++...-...+.  ...+....  ..+++. +.++++|+||.+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~y-~~~~daDivvit   75 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEELK-KALKGADVVVIP   75 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCchH-HhcCCCCEEEEe
Confidence            479999999999999999999887  579999887  222111000011  11111110  112344 567899999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEecc
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSV  203 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~  203 (333)
                      ||...-+   ...-.+.++.|..-...+++.++. +-+ .+|.+|=.
T Consensus        76 aG~~~k~---g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNP  119 (310)
T cd01337          76 AGVPRKP---GMTRDDLFNINAGIVRDLATAVAKACPKALILIISNP  119 (310)
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            9975322   122345677788888888886643 333 55555533

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.32  E-value=0.00072  Score=59.85  Aligned_cols=79  Identities=24%  Similarity=0.260  Sum_probs=55.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++++|.|| |+.+++++..|++.| .+|+++.|+.++.+++.+............++   ..++ . ....|+|||
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~---~~~~-~-~~~~dliIN  196 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAAL---ADLE-G-LEEADLLIN  196 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccc---cccc-c-ccccCEEEE
Confidence            345789999995 999999999999999 58999999999988876544221111111222   2222 1 115899999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.....
T Consensus       197 aTp~Gm  202 (283)
T COG0169         197 ATPVGM  202 (283)
T ss_pred             CCCCCC
Confidence            987764

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.30  E-value=0.00082  Score=51.87  Aligned_cols=73  Identities=14%  Similarity=0.105  Sum_probs=42.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +|.|.||||++|+.+++.|++. ..++..+ .++.+..+.+....+ .....  ...+.+  ... ..+.++|+||.+.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~--~~~-~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFE--DLSVED--ADP-EELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTE--EEBEEE--TSG-HHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccc--ceeEee--cch-hHhhcCCEEEecCc
Confidence            6899999999999999999996 3565554 444423332222110 00111  111111  122 45688999999985


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus        76 ~   76 (121)
T PF01118_consen   76 H   76 (121)
T ss_dssp             H
T ss_pred             h
Confidence            3

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.29  E-value=0.00067  Score=60.59  Aligned_cols=71  Identities=14%  Similarity=0.099  Sum_probs=52.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++++|+|. |.+|+.+++.|...|++|++++|++++......    .+...+.     .+++. +.+.++|+||++
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~----~g~~~~~-----~~~l~-~~l~~aDiVint  216 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE----MGLIPFP-----LNKLE-EKVAEIDIVINT  216 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeeec-----HHHHH-HHhccCCEEEEC
Confidence            567899999996 889999999999999999999999866544331    1222221     22345 567889999998


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus       217 ~P  218 (287)
T TIGR02853       217 IP  218 (287)
T ss_pred             CC
Confidence            74

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.28  E-value=0.0011  Score=55.89  Aligned_cols=71  Identities=18%  Similarity=0.103  Sum_probs=51.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++++|+|+|+|. |.+|+++++.|.+.|++|++.++++++.+.+....   +.+.+  |.   +++.   ...+|+++.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~---g~~~v--~~---~~l~---~~~~Dv~vp   91 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF---GATVV--AP---EEIY---SVDADVFAP   91 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc---CCEEE--cc---hhhc---cccCCEEEe
Confidence            3567889999996 79999999999999999999999887766654321   22322  21   2222   126999998


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +|.
T Consensus        92 ~A~   94 (200)
T cd01075          92 CAL   94 (200)
T ss_pred             ccc
Confidence            874

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.27  E-value=0.00074  Score=60.24  Aligned_cols=77  Identities=23%  Similarity=0.330  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ...+++|+|.|+ |+.|++++..|+..|. +|++++|+.++.+.+.+...  .....+..     .+++. +.+.++|+|
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~-~~~~~aDiV  196 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLA-AALAAADGL  196 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchH-hhhCCCCEE
Confidence            345689999995 8899999999999996 79999999988877754321  11122211     12334 456779999


Q ss_pred             EEcCCCC
Q 019935          156 ICCTGTT  162 (333)
Q Consensus       156 i~~a~~~  162 (333)
                      ||+....
T Consensus       197 InaTp~G  203 (284)
T PRK12549        197 VHATPTG  203 (284)
T ss_pred             EECCcCC
Confidence            9996543

>PRK04148 hypothetical protein; Provisional

Probab=97.27  E-value=0.00067  Score=52.83  Aligned_cols=70  Identities=14%  Similarity=0.108  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++|++.|. | -|.+++..|.+.|++|++++.++...+...    ...++++.+|+.+++-   +.-+++|.|+..=
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~----~~~~~~v~dDlf~p~~---~~y~~a~liysir   85 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK----KLGLNAFVDDLFNPNL---EIYKNAKLIYSIR   85 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH----HhCCeEEECcCCCCCH---HHHhcCCEEEEeC
Confidence            3468999995 6 899999999999999999999998776655    4567899999998762   3457889988764

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.25  E-value=0.0014  Score=58.65  Aligned_cols=114  Identities=20%  Similarity=0.154  Sum_probs=70.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCc-eEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~-~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +||.|+|+ |+||+.++..|+.++  .++++++++.++.+.......+.. ..-....+....+.  +.++++|+|+-.|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y--~~~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDY--EDLKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCCh--hhhcCCCEEEEeC
Confidence            47999999 999999999998775  489999998655443221111100 00011111111122  4577899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEec
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS  202 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS  202 (333)
                      |...-|   -..-.+.++.|..-...+.+.+.. +.+-++.+-|
T Consensus        78 G~prKp---GmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          78 GVPRKP---GMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            875422   222345778888888888887644 4444554443

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.25  E-value=0.0015  Score=58.89  Aligned_cols=111  Identities=20%  Similarity=0.172  Sum_probs=68.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ||.|+|++|.+|++++..|+..+.  +++++++++...+.+- .... ....+....  +.+++. +.++++|+||.+||
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~D-L~~~~~~~~i~~~~--~~~~~~-~~~~daDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAAD-LSHIPTAASVKGFS--GEEGLE-NALKGADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEch-hhcCCcCceEEEec--CCCchH-HHcCCCCEEEEeCC
Confidence            589999999999999999988874  7999998762211110 0001 111111101  112234 57889999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEe
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS  201 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~S  201 (333)
                      ...-+   -..-.+....|..-...+.+.++. +-+ .||.+|
T Consensus        77 ~~~~~---g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        77 VPRKP---GMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCCCC---CccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            75422   122344677788888888876643 333 455544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.22  E-value=0.00067  Score=66.60  Aligned_cols=74  Identities=19%  Similarity=0.269  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ..+++|.| .|.+|+++++.|.++|++|++++.++++.+...    ..+..++.+|.+|++.+++.-++++|.++-+.+
T Consensus       417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~----~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~  490 (558)
T PRK10669        417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELR----ERGIRAVLGNAANEEIMQLAHLDCARWLLLTIP  490 (558)
T ss_pred             CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HCCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence            34799999 599999999999999999999999998887776    457889999999999888545678998877653

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.22  E-value=0.00072  Score=60.30  Aligned_cols=78  Identities=18%  Similarity=0.183  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++++|.|+ |+.|++++.+|++.|. +|++++|+.++.+.+.+.... ...+...+  ..+++. ..+.++|+|||+
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~-~~~~~~~~--~~~~~~-~~~~~~DiVIna  197 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ-VGVITRLE--GDSGGL-AIEKAAEVLVST  197 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh-cCcceecc--chhhhh-hcccCCCEEEEC
Confidence            46789999995 9999999999999995 799999999888877643211 11111111  112233 445679999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus       198 Tp~g  201 (282)
T TIGR01809       198 VPAD  201 (282)
T ss_pred             CCCC
Confidence            8764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.22  E-value=0.0013  Score=60.34  Aligned_cols=75  Identities=16%  Similarity=0.102  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEE-EccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v-~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +++|+|.||||++|+.+++.|++. +++++++.++.+..+.+...  ...+... ..++.+.+.   ..+.++|+||.+.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~--~~~~~~~~~~~~~~~~~---~~~~~vD~Vf~al   76 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV--HPHLRGLVDLVLEPLDP---EILAGADVVFLAL   76 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh--CcccccccCceeecCCH---HHhcCCCEEEECC
Confidence            468999999999999999999987 68888877643332222211  1111111 112222221   2346799999987


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      ..
T Consensus        77 P~   78 (343)
T PRK00436         77 PH   78 (343)
T ss_pred             Cc
Confidence            53

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.22  E-value=0.00074  Score=62.60  Aligned_cols=75  Identities=13%  Similarity=0.074  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ...+|+|+|+ |.+|...++.|...|.+|++++|++++.+.+.... ..   .+..+..+++.+. +.+.++|+||++++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-g~---~v~~~~~~~~~l~-~~l~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-GG---RIHTRYSNAYEIE-DAVKRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-Cc---eeEeccCCHHHHH-HHHccCCEEEEccc
Confidence            4567999986 99999999999999999999999987766543221 11   1234455556666 67889999999885


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       240 ~  240 (370)
T TIGR00518       240 I  240 (370)
T ss_pred             c
Confidence            4

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.20  E-value=0.0013  Score=55.71  Aligned_cols=108  Identities=17%  Similarity=0.219  Sum_probs=65.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc-------------------hhhhhhccC----CCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~~~~~~~----~~~~~~~v  134 (333)
                      .+...+|+|.| .|++|+++++.|+..|. ++++++++.-                   +.+.+.+..    +.-+++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            45667899999 69999999999999995 8999987631                   111111111    12233333


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      ..++. .+.+. +.+.+.|+||.+...                  ...-..+.+.++..-+.+|+.+..+.+|
T Consensus        97 ~~~i~-~~~~~-~~~~~~D~Vi~~~d~------------------~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        97 KERVT-AENLE-LLINNVDLVLDCTDN------------------FATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hhcCC-HHHHH-HHHhCCCEEEECCCC------------------HHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            34443 23455 678899999998632                  1222344455544334677766555443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.20  E-value=0.0011  Score=60.32  Aligned_cols=114  Identities=13%  Similarity=0.086  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcc--hhhhhhccCCCCceEEE-EccCCCcCCCchhhhcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~~~~~~~~~~~~~~~v-~~D~~d~~~~~~~~~~~  151 (333)
                      +++|.|+|++|.+|+.++..|+..|.       +++++++++.  +++.......+....+. ...++  .... +.+++
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y-~~~~d   80 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPN-VAFKD   80 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChH-HHhCC
Confidence            45899999999999999999988762       7899988543  22221110001000000 00111  1122 46789


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEe
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS  201 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~S  201 (333)
                      +|+||.+||...-   ....-.+.+..|..-...+.+.++. .  -..++.+|
T Consensus        81 aDiVVitaG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         81 ADVALLVGARPRG---PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             CCEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            9999999997432   2223345677788888888886644 3  23555555

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.18  E-value=0.00056  Score=64.16  Aligned_cols=76  Identities=21%  Similarity=0.227  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+++|+|.|+ |.+|+.++..|...| .++++++|+.++++.+......  ..++.     .+++. +.+..+|+||+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~~~-----~~~l~-~~l~~aDiVI~  248 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASAHY-----LSELP-QLIKKADIIIA  248 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeEec-----HHHHH-HHhccCCEEEE
Confidence            466789999996 999999999999999 4799999999888777654311  22221     23445 66788999999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.+..+
T Consensus       249 aT~a~~  254 (414)
T PRK13940        249 AVNVLE  254 (414)
T ss_pred             CcCCCC
Confidence            998643

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.16  E-value=0.0012  Score=59.20  Aligned_cols=71  Identities=15%  Similarity=0.119  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|+|.|. |.+|+.++..|.+.|.+|++++|++++.....    ..+++++.     .+.+. +.+.++|+||++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~----~~G~~~~~-----~~~l~-~~l~~aDiVI~t  217 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT----EMGLSPFH-----LSELA-EEVGKIDIIFNT  217 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCeeec-----HHHHH-HHhCCCCEEEEC
Confidence            345789999996 88999999999999999999999976654433    22333321     23445 667889999998


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      +.
T Consensus       218 ~p  219 (296)
T PRK08306        218 IP  219 (296)
T ss_pred             CC
Confidence            63

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.15  E-value=0.001  Score=63.48  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-CCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-~~d~vi~~  158 (333)
                      +.+++|+|||++| +|.++++.|++.|++|++.+++..............++.+..++.  +.    ..+. ++|.||++
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~----~~~~~~~d~vV~s   75 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PL----ELLDEDFDLMVKN   75 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CH----HHhcCcCCEEEEC
Confidence            4578999999976 999999999999999999987653222111111123455443321  11    2223 48999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      +|+.
T Consensus        76 ~gi~   79 (447)
T PRK02472         76 PGIP   79 (447)
T ss_pred             CCCC
Confidence            9874

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.14  E-value=0.0027  Score=57.04  Aligned_cols=66  Identities=18%  Similarity=0.202  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++|.|.| .|.+|..+++.|++.|++|++++|++++.+.+..    .++..       .+++. ++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~g~~~-------~~~~~-e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA----AGAET-------ASTAK-AVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----CCCee-------cCCHH-HHHhcCCEEEEeCC
Confidence            35799998 6999999999999999999999999877765542    12211       12344 56678999999874

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.14  E-value=0.00085  Score=65.14  Aligned_cols=76  Identities=20%  Similarity=0.184  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++++|+|+ |++|++++..|++.|++|++++|+.++.+.+.+... .  ..+  ++.+   +........|+|||+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~-~--~~~--~~~~---~~~~~~~~~diiINt  446 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG-G--QAL--TLAD---LENFHPEEGMILANT  446 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-C--cee--eHhH---hhhhccccCeEEEec
Confidence            356789999998 899999999999999999999999888777654321 1  111  1211   110112346889988


Q ss_pred             CCCCC
Q 019935          159 TGTTA  163 (333)
Q Consensus       159 a~~~~  163 (333)
                      .....
T Consensus       447 T~vGm  451 (529)
T PLN02520        447 TSVGM  451 (529)
T ss_pred             ccCCC
Confidence            87654

>PLN02928 oxidoreductase family protein

Probab=97.13  E-value=0.002  Score=59.18  Aligned_cols=82  Identities=13%  Similarity=0.058  Sum_probs=54.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++++|.| .|.||+.+++.|...|.+|++++|+..+............+..+........+++ +++..+|+|+.
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-ell~~aDiVvl  232 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIY-EFAGEADIVVL  232 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHH-HHHhhCCEEEE
Confidence            357889999999 5999999999999999999999987432211100000011111111111345677 88999999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       233 ~lPl  236 (347)
T PLN02928        233 CCTL  236 (347)
T ss_pred             CCCC
Confidence            9864

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.12  E-value=0.0012  Score=55.15  Aligned_cols=67  Identities=9%  Similarity=0.064  Sum_probs=44.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |++.|.| +|.||..+++.|++.||+|++-.|+.++ .....+.. ...+        ...+.+ .+.+.+|+||....
T Consensus         2 ~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l-~~~i--------~~~~~~-dA~~~aDVVvLAVP   69 (211)
T COG2085           2 MIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL-GPLI--------TGGSNE-DAAALADVVVLAVP   69 (211)
T ss_pred             cEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh-cccc--------ccCChH-HHHhcCCEEEEecc
Confidence            4565555 8999999999999999999998665544 33333221 2221        223444 56677899988764

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=97.11  E-value=0.0028  Score=56.94  Aligned_cols=65  Identities=17%  Similarity=0.238  Sum_probs=50.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|.|.| .|.+|..++..|++.|++|++++|++++.+.+...    ++.       ...+.. ++.+++|+||-+..
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~----g~~-------~~~s~~-~~~~~aDvVi~~vp   66 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK----GAT-------PAASPA-QAAAGAEFVITMLP   66 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc----CCc-------ccCCHH-HHHhcCCEEEEecC
Confidence            4789998 69999999999999999999999998887766532    211       122344 56678999998874

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.10  E-value=0.00085  Score=59.24  Aligned_cols=112  Identities=21%  Similarity=0.165  Sum_probs=68.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |.|+||+|.+|..++..|+..|    .+|+++++++++++........ .... ....+.--+++. +.++++|+||..+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~-~~~~~aDiVv~t~   78 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPY-EAFKDADVVIITA   78 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchH-HHhCCCCEEEECC
Confidence            5799999999999999999988    7999999987665443221100 0000 011221122345 6788999999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +....+   ..........|+.....+.+.+++ +- ..+++.|
T Consensus        79 ~~~~~~---g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          79 GVGRKP---GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            875422   111122445577777777776643 32 2455543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.09  E-value=0.004  Score=56.62  Aligned_cols=99  Identities=17%  Similarity=0.185  Sum_probs=64.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh-cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~-~~~d~vi  156 (333)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+    -++.. ..|..+.+.+.+   ... +++|+++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK----LGFDV-AFNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence            46799999999999999999888889999999998877665542    12221 123333223331   111 3689999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ++.|..                   .....++.++. .++||.++...
T Consensus       213 d~~G~~-------------------~~~~~~~~l~~-~G~iv~~G~~~  240 (325)
T TIGR02825       213 DNVGGE-------------------FSNTVIGQMKK-FGRIAICGAIS  240 (325)
T ss_pred             ECCCHH-------------------HHHHHHHHhCc-CcEEEEecchh
Confidence            988631                   12344555554 35888877554

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.08  E-value=0.00097  Score=59.38  Aligned_cols=79  Identities=20%  Similarity=0.288  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCC-Cce-EEEEccCCCcCCCchhhhcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETL-QVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~-~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..+++++|.|+ |+.|++++-.|++.|. +|++++|+.++.+++.+.... .+. .....|.   ..+. ..+..+|+||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~-~~~~~~divI  199 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIE-DVIAAADGVV  199 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHH-HHHhhcCEEE
Confidence            45689999996 9999999999999995 799999999888877543210 011 1111221   1223 3445789999


Q ss_pred             EcCCCCC
Q 019935          157 CCTGTTA  163 (333)
Q Consensus       157 ~~a~~~~  163 (333)
                      |+.....
T Consensus       200 NaTp~Gm  206 (283)
T PRK14027        200 NATPMGM  206 (283)
T ss_pred             EcCCCCC
Confidence            9886653

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.07  E-value=0.003  Score=49.65  Aligned_cols=105  Identities=18%  Similarity=0.226  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh-----------------------hccCCCCceEEEEcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-----------------------FGKQDEETLQVCKGD  137 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~v~~D  137 (333)
                      .++|+|.| .|.+|+.++..|+..|. ++++++.+.=....+                       .+..+..+++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            35899999 59999999999999996 788888643211111                       111123445666666


Q ss_pred             CCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       138 ~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      + +.+... +.++++|+||.+...                  ...-..+.+.++..-+.+|+.+..+.+|
T Consensus        81 ~-~~~~~~-~~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 I-DEENIE-ELLKDYDIVIDCVDS------------------LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             C-SHHHHH-HHHHTSSEEEEESSS------------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             c-cccccc-ccccCCCEEEEecCC------------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            6 334455 677899999998642                  2233445556654345788877665544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.07  E-value=0.0012  Score=60.53  Aligned_cols=68  Identities=24%  Similarity=0.333  Sum_probs=41.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEE---EEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSR---LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~---~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +|+|.||||++|+.+++.|.+++|.+.   .+.+..+..+.+.    ..+...+..|+.     . ..+.++|+||.+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~----~~~~~~~~~~~~-----~-~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT----FKGKELEVNEAK-----I-ESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee----eCCeeEEEEeCC-----h-HHhcCCCEEEECCC
Confidence            489999999999999999999877643   4446544333332    112344444542     1 22355666666655


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus        71 ~   71 (339)
T TIGR01296        71 G   71 (339)
T ss_pred             H
Confidence            3

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.06  E-value=0.0028  Score=57.53  Aligned_cols=115  Identities=10%  Similarity=0.048  Sum_probs=67.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEE--EccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVC--KGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v--~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +.++|.|+|| |.+|+.++..|+..| .++++++++++..+...-..... ....  ...+....++  +.+.++|+||.
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~-~~~~~~~~~i~~~~d~--~~l~~ADiVVi   79 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF-STLVGSNINILGTNNY--EDIKDSDVVVI   79 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh-ccccCCCeEEEeCCCH--HHhCCCCEEEE
Confidence            4468999997 999999999999888 78999999876543211000000 0000  0011111223  35689999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEec
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSS  202 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS  202 (333)
                      ++|....+.   ....+....|..-...+.+.+.. +-+ .+|++|-
T Consensus        80 tag~~~~~g---~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         80 TAGVQRKEE---MTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            998753221   11233555676666667766543 333 3565543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.06  E-value=0.002  Score=59.22  Aligned_cols=99  Identities=16%  Similarity=0.116  Sum_probs=56.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCcchhhhhhccCCCCceEEE-EccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~~~v-~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++|.|.||||++|..+++.|.+. +.+++.+ +++.+..+.+...  .+.+... ..++.+ .+.+ +...++|+||.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~--~~~l~~~~~~~~~~-~~~~-~~~~~~DvVf~al   76 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV--HPHLRGLVDLNLEP-IDEE-EIAEDADVVFLAL   76 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh--CccccccCCceeec-CCHH-HhhcCCCEEEECC
Confidence            47999999999999999999987 6788744 5443222222111  1111111 111211 1223 3445799999998


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEecccc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGV  205 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~  205 (333)
                      +..                   ....++..+ +.| +++|=.|+..-
T Consensus        77 P~~-------------------~s~~~~~~~~~~G-~~VIDlS~~fR  103 (346)
T TIGR01850        77 PHG-------------------VSAELAPELLAAG-VKVIDLSADFR  103 (346)
T ss_pred             Cch-------------------HHHHHHHHHHhCC-CEEEeCChhhh
Confidence            542                   234455533 445 57887777654

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.03  E-value=0.0028  Score=56.60  Aligned_cols=83  Identities=16%  Similarity=0.190  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc---chhhhhhccCCCC-ceEEEEccCCCcCCCchhhhcCCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---EKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~---~~~~~~~~~~~~~-~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      +..+++++|.|+ |+.+++++..|+..|. +|++++|+.   ++++.+.+..... ...+...++.+.+.+. +.+.+.|
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~-~~~~~aD  198 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA-EALASAD  198 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh-hhcccCC
Confidence            356789999996 7779999999999985 899999985   3666554432111 1111112222222244 4556789


Q ss_pred             EEEEcCCCCC
Q 019935          154 HVICCTGTTA  163 (333)
Q Consensus       154 ~vi~~a~~~~  163 (333)
                      +|||+.....
T Consensus       199 ivINaTp~Gm  208 (288)
T PRK12749        199 ILTNGTKVGM  208 (288)
T ss_pred             EEEECCCCCC
Confidence            9999876554

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.01  E-value=0.0079  Score=51.86  Aligned_cols=137  Identities=13%  Similarity=0.095  Sum_probs=74.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------hhhhc----cCCCCceEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFG----KQDEETLQVCK  135 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------~~~~~----~~~~~~~~~v~  135 (333)
                      +...+|+|.| .|++|+++++.|++.|. ++++++.+.=..                   +.+.+    ..+..+++.+.
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            4557899999 59999999999999994 788887653111                   11111    10122334444


Q ss_pred             ccCCCcCCCchhhh-cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCCCCcc
Q 019935          136 GDTRNPKDLDPAIF-EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       136 ~D~~d~~~~~~~~~-~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                      ..++ ++... ..+ .+.|+||.+...                  ...-..+.+.++..-..||...+.+...+.+. +.
T Consensus        88 ~~i~-~~~~~-~l~~~~~D~VvdaiD~------------------~~~k~~L~~~c~~~~ip~I~s~g~g~~~dp~~-i~  146 (231)
T cd00755          88 EFLT-PDNSE-DLLGGDPDFVVDAIDS------------------IRAKVALIAYCRKRKIPVISSMGAGGKLDPTR-IR  146 (231)
T ss_pred             eecC-HhHHH-HHhcCCCCEEEEcCCC------------------HHHHHHHHHHHHHhCCCEEEEeCCcCCCCCCe-EE
Confidence            4443 23344 444 368999988632                  22335566666543345665444443322221 11


Q ss_pred             chhhhH--HHHHHHHHHHHHHhcCCC
Q 019935          215 IMNLFG--VLKYKKMGEDFVQKSGLP  238 (333)
Q Consensus       215 ~~~~~~--~~k~k~~~e~~l~~~gi~  238 (333)
                      -...+-  .-...+.+++.|++.|+.
T Consensus       147 i~di~~t~~~pla~~~R~~Lrk~~~~  172 (231)
T cd00755         147 VADISKTSGDPLARKVRKRLRKRGIF  172 (231)
T ss_pred             EccEeccccCcHHHHHHHHHHHcCCC
Confidence            111010  012345678888888875

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.023  Score=54.20  Aligned_cols=31  Identities=16%  Similarity=0.144  Sum_probs=27.2

Q ss_pred             EEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           87 VAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        87 VtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      |+||+|++|.++++.|...|++|++..+.+.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~   73 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGL   73 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence            7788899999999999999999998866543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.99  E-value=0.0048  Score=55.81  Aligned_cols=69  Identities=17%  Similarity=0.149  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|.|.| .|.||+.+++.|...|.+|++++|..+...         ++..+    ...++++ +++.++|+|+.
T Consensus       132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~----~~~~~l~-e~l~~aDvvv~  196 (312)
T PRK15469        132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSF----AGREELS-AFLSQTRVLIN  196 (312)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------Cceee----cccccHH-HHHhcCCEEEE
Confidence            356789999999 799999999999999999999998653321         11111    1245677 88999999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       197 ~lPl  200 (312)
T PRK15469        197 LLPN  200 (312)
T ss_pred             CCCC
Confidence            8854

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.97  E-value=0.0013  Score=65.05  Aligned_cols=73  Identities=21%  Similarity=0.268  Sum_probs=63.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+|+|.| .|.+|+.+++.|.++|+++++++.|+++.+...    ..+..++.||.+|++.+++.-++++|.+|-+..
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~----~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~  473 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMR----KYGYKVYYGDATQLELLRAAGAEKAEAIVITCN  473 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHH----hCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence            5798999 599999999999999999999999998888765    457889999999999988555778999888763

>PLN00203 glutamyl-tRNA reductase

Probab=96.97  E-value=0.0018  Score=62.46  Aligned_cols=76  Identities=24%  Similarity=0.304  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +.+++|+|.|+ |.+|+.+++.|...|. +|++++|+.++.+.+.....  +..+...++   +++. ..+.++|+||.+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~~~~---~dl~-~al~~aDVVIsA  336 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIYKPL---DEML-ACAAEADVVFTS  336 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEeecH---hhHH-HHHhcCCEEEEc
Confidence            56789999997 9999999999999996 79999999988877764321  222211222   3445 567889999998


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .+..
T Consensus       337 T~s~  340 (519)
T PLN00203        337 TSSE  340 (519)
T ss_pred             cCCC
Confidence            7643

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.96  E-value=0.0019  Score=57.39  Aligned_cols=58  Identities=17%  Similarity=0.249  Sum_probs=46.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+..+++|+|.|++|.+|+.++..|+++|++|+++.|..                         ..+. +.++++|+||+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------------------~~L~-~~~~~aDIvI~  208 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------------------QNLP-ELVKQADIIVG  208 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------------------hhHH-HHhccCCEEEE
Confidence            357889999999999999999999999999999887732                         1233 44567899999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +.|.
T Consensus       209 AtG~  212 (283)
T PRK14192        209 AVGK  212 (283)
T ss_pred             ccCC
Confidence            8863

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.96  E-value=0.0038  Score=55.95  Aligned_cols=64  Identities=16%  Similarity=0.135  Sum_probs=49.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +|.|.| .|.+|..++..|++.|++|++++|++++.+.+...    +..       ...+.. ++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~-------~~~~~~-~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA----GAV-------TAETAR-QVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCc-------ccCCHH-HHHhcCCEEEEecC
Confidence            377887 69999999999999999999999998877765421    111       122444 56788999999874

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.96  E-value=0.0024  Score=58.49  Aligned_cols=100  Identities=21%  Similarity=0.194  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh-cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~-~~~d~vi  156 (333)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+.   -++..+ .|..+.+++.+   +.. .++|+|+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~---lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~  226 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK---LGFDDA-FNYKEEPDLDAALKRYFPNGIDIYF  226 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCcee-EEcCCcccHHHHHHHhCCCCcEEEE
Confidence            467999999999999999998888999999999988776655431   122211 23222222221   111 3789999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ++.|..                   .....++.++.+ ++|+.++...
T Consensus       227 d~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  254 (338)
T cd08295         227 DNVGGK-------------------MLDAVLLNMNLH-GRIAACGMIS  254 (338)
T ss_pred             ECCCHH-------------------HHHHHHHHhccC-cEEEEecccc
Confidence            987631                   234455555543 5888777543

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.96  E-value=0.0013  Score=65.29  Aligned_cols=72  Identities=31%  Similarity=0.333  Sum_probs=62.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++|+|.|. |.+|+.+++.|.++|+++++++.++++.+...    ..+..++.+|.+|++.+++.-++++|.||-+.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~----~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLR----KFGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHH----hcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            57999995 99999999999999999999999999888775    45788999999999988744567899988876

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.95  E-value=0.0019  Score=58.37  Aligned_cols=108  Identities=18%  Similarity=0.144  Sum_probs=67.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +||.|+|+ |.+|+.++..|+..|  .++++++.++++++.......+     ....+...     .+++  .++++|+|
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~--~~~~adiv   75 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYS--VTANSKVV   75 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHH--HhCCCCEE
Confidence            58999996 999999999999887  4799999887655432211100     11122211     1233  36789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      |.+||...-+   ...-.+.+..|..-...+.+.++. +- ..++.+|
T Consensus        76 vitaG~~~k~---g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          76 IVTAGARQNE---GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             EECCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            9999975321   122234567788777877776643 33 3455555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.95  E-value=0.0023  Score=56.24  Aligned_cols=110  Identities=18%  Similarity=0.196  Sum_probs=74.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC---CCchhhhcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~---~~~~~~~~~~d~vi  156 (333)
                      ..+.+|+|+||+|-+|+-+.+...-+|++|+.+.-.+++...+.+..   ++. ...|..+++   .|.++.-+++|+.|
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD-~~idyk~~d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD-AGIDYKAEDFAQALKEACPKGIDVYF  224 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc-eeeecCcccHHHHHHHHCCCCeEEEE
Confidence            35789999999999999888877778999999999999988776532   111 123444432   12212235899999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCCCCc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~  213 (333)
                      .|.|...                .   ..++..+. -..||+.++-++.|..++.+.
T Consensus       225 eNVGg~v----------------~---DAv~~~ln-~~aRi~~CG~IS~YN~~~~~~  261 (340)
T COG2130         225 ENVGGEV----------------L---DAVLPLLN-LFARIPVCGAISQYNAPELPP  261 (340)
T ss_pred             EcCCchH----------------H---HHHHHhhc-cccceeeeeehhhcCCCCCCC
Confidence            9998521                1   12222222 235999999999998775454

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.94  E-value=0.0022  Score=58.76  Aligned_cols=77  Identities=27%  Similarity=0.305  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc----CCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----GVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~----~~d~v  155 (333)
                      .++++|||.||+|++|++.++.+...|+.+++.+++.+..+-....    ++. ...|..+++-.+ ...+    ++|+|
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~l----GAd-~vvdy~~~~~~e-~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKL----GAD-EVVDYKDENVVE-LIKKYTGKGVDVV  229 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHc----CCc-EeecCCCHHHHH-HHHhhcCCCccEE
Confidence            3567999999999999999999999996666666666665544422    111 134776755444 3333    69999


Q ss_pred             EEcCCCC
Q 019935          156 ICCTGTT  162 (333)
Q Consensus       156 i~~a~~~  162 (333)
                      ++|.|..
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999863

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.93  E-value=0.014  Score=51.40  Aligned_cols=36  Identities=25%  Similarity=0.288  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRD  115 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~  115 (333)
                      .+...+|+|.| .|++|+++++.|++.| .++++++.+
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45667899999 5999999999999999 678888865

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.92  E-value=0.0056  Score=57.75  Aligned_cols=41  Identities=20%  Similarity=0.139  Sum_probs=36.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      .++|.|.| .|++|..++..|+++|++|+++++++++.+.+.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~   43 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTIN   43 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            36899998 699999999999999999999999998877653

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.92  E-value=0.002  Score=60.57  Aligned_cols=108  Identities=14%  Similarity=0.099  Sum_probs=71.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-------CC--eEEEEEcCcchhhhhhccCCC------CceEEEEccCCCcCCCchh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-------NI--KSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-------g~--~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~D~~d~~~~~~~  147 (333)
                      -+|.|+|++|.+|.+++..|+..       |.  +++++++++++++...-...+      .++.+. .     +..  +
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~-----~~y--e  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I-----DPY--E  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c-----CCH--H
Confidence            48999999999999999999987       64  788999988776543221111      111111 1     122  4


Q ss_pred             hhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCC-eEEEEe
Q 019935          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLK-RIVLVS  201 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~S  201 (333)
                      .++++|+||..||...-+   ...-.+.++.|..-...+.+.+..  +-. .||.+|
T Consensus       173 ~~kdaDiVVitAG~prkp---G~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGP---GMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             HhCcCCEEEECCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            678999999999975322   223345677788888888886643  333 455544

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.91  E-value=0.0058  Score=55.49  Aligned_cols=100  Identities=17%  Similarity=0.132  Sum_probs=65.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh--cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~--~~~d~vi  156 (333)
                      .+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+...    +... ..|..+.+..+.  ...  .++|.++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL----GADY-VIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCe-EEecCChHHHHHHHHHhCCCCCcEEE
Confidence            457899999999999999999999999999999987766544321    1111 124433332220  111  3689999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +++|..                   ....+++.++.+ ++|+.+++...
T Consensus       241 ~~~g~~-------------------~~~~~~~~l~~~-G~~v~~~~~~~  269 (342)
T cd08266         241 EHVGAA-------------------TWEKSLKSLARG-GRLVTCGATTG  269 (342)
T ss_pred             ECCcHH-------------------HHHHHHHHhhcC-CEEEEEecCCC
Confidence            998731                   123344455443 68999887654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.88  E-value=0.0021  Score=60.69  Aligned_cols=74  Identities=28%  Similarity=0.329  Sum_probs=55.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ...+++|+|.|+ |.+|..+++.|...| .+|++++|+.++...+....   +...+..     +++. +.+.++|+||.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~~i~~-----~~l~-~~l~~aDvVi~  246 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGEAVKF-----EDLE-EYLAEADIVIS  246 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCeEeeH-----HHHH-HHHhhCCEEEE
Confidence            356789999996 999999999999999 78999999988776654332   1122221     2455 56778999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +.+..
T Consensus       247 aT~s~  251 (417)
T TIGR01035       247 STGAP  251 (417)
T ss_pred             CCCCC
Confidence            97643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.88  E-value=0.0011  Score=67.41  Aligned_cols=160  Identities=19%  Similarity=0.220  Sum_probs=98.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcch--hhhh-hccCCCCce--EEEEccCCCcCCCchhhh------
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEK--ATTL-FGKQDEETL--QVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~--~~~~-~~~~~~~~~--~~v~~D~~d~~~~~~~~~------  149 (333)
                      .|..+|+||-|+.|..|++.|..+|.+ +++.+|+.-+  .+.+ ...+...++  .+-.-|++...... .++      
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~-~Li~~s~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGAR-GLIEESNKL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHH-HHHHHhhhc
Confidence            468999999999999999999999975 5666776532  1221 112223344  44456666655555 443      


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      ..+-.|||+|.......   .......+.-+.-+.|+.||-+.-+.   -.+.||..||++.-.    .-...+.||...
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR----GN~GQtNYG~aN 1922 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR----GNAGQTNYGLAN 1922 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC----CCCcccccchhh
Confidence            35678888887654111   11122233444456777777665544   357899999987644    233455677655


Q ss_pred             H--HHHHHHHHHhcCCCEEEEEcccc
Q 019935          224 Y--KKMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       224 ~--k~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                      +  .+.+|+. +..|++-+.|.=|.+
T Consensus      1923 S~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1923 SAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             HHHHHHHHHh-hhcCCCcceeeeecc
Confidence            4  3444432 456888888887755

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.87  E-value=0.0039  Score=56.62  Aligned_cols=111  Identities=13%  Similarity=0.211  Sum_probs=66.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhc----c--CCCCceEEEE-ccCCCcCCCchhhhcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFG----K--QDEETLQVCK-GDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~----~--~~~~~~~~v~-~D~~d~~~~~~~~~~~~  152 (333)
                      +.++|.|.| +|.+|+.++..|+..|. +|++++++++.......    .  .......+.. .|      +  +.+.++
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d------~--~~l~~a   75 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN------Y--EDIAGS   75 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC------H--HHhCCC
Confidence            446899999 59999999999999994 89999998875432110    0  0011122221 22      2  346789


Q ss_pred             cEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEe
Q 019935          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS  201 (333)
Q Consensus       153 d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~S  201 (333)
                      |+||.++|...-+..   +|.. .+....|..-...+++.+.. +-+ .+++.|
T Consensus        76 DiVI~tag~~~~~~~~~~~~~r-~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         76 DVVIVTAGLTKRPGKSDKEWNR-DDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             CEEEECCCCCCCCCCCcCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999987542211   0111 22344566666666665543 333 566555

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.86  E-value=0.002  Score=55.23  Aligned_cols=72  Identities=24%  Similarity=0.160  Sum_probs=50.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCce--EEEEccCCCcCCCchhhhcCCcEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETL--QVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~--~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      |+|.|+||+|.+|..++..|++.|++|++++|++++.+.+....    ...++  .+...      ... +.++.+|+||
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~-ea~~~aDvVi   73 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNA-EAAKRADVVI   73 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChH-HHHhcCCEEE
Confidence            47999999999999999999999999999999987765543210    00111  11111      123 4567889999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      .+...
T Consensus        74 lavp~   78 (219)
T TIGR01915        74 LAVPW   78 (219)
T ss_pred             EECCH
Confidence            88743

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.84  E-value=0.0056  Score=56.84  Aligned_cols=71  Identities=15%  Similarity=0.066  Sum_probs=52.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.+++|.|.| .|.||+.+++.|...|.+|++++|.....+...    ..       ++.-..+++ ++++.+|+|+.
T Consensus       188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~----~~-------g~~~~~~l~-ell~~aDvV~l  254 (385)
T PRK07574        188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ----EL-------GLTYHVSFD-SLVSVCDVVTI  254 (385)
T ss_pred             eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHh----hc-------CceecCCHH-HHhhcCCEEEE
Confidence            357889999999 599999999999999999999998753221111    11       122224577 78899999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       255 ~lPl  258 (385)
T PRK07574        255 HCPL  258 (385)
T ss_pred             cCCC
Confidence            8854

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.84  E-value=0.0017  Score=61.35  Aligned_cols=73  Identities=29%  Similarity=0.344  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++|+|.|+ |.+|+.+++.|...|. +|++++|++++...+.....   ..++     +.+++. +.+.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~~~~-----~~~~~~-~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---GEAI-----PLDELP-EALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---CcEe-----eHHHHH-HHhccCCEEEEC
Confidence            56789999996 9999999999999996 79999999888766654321   1122     123344 566789999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .+..
T Consensus       250 T~s~  253 (423)
T PRK00045        250 TGAP  253 (423)
T ss_pred             CCCC
Confidence            8753

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.84  E-value=0.0078  Score=51.27  Aligned_cols=78  Identities=15%  Similarity=0.230  Sum_probs=50.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch------------------hhhhh----ccCCCCceEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK------------------ATTLF----GKQDEETLQVCK  135 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~------------------~~~~~----~~~~~~~~~~v~  135 (333)
                      .+...+|+|.|+ |++|++++..|+..|. ++++++.+.-.                  .+...    +..+.-+++.+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            445678999995 9999999999999995 58888876311                  11111    111122344444


Q ss_pred             ccCCCcCCCchhhhcCCcEEEEcC
Q 019935          136 GDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       136 ~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++ +.+. +.++++|+||.+.
T Consensus       104 ~~i~~-~~~~-~~~~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIE-ELFKDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHH-HHHcCCCEEEECC
Confidence            45543 3344 5778899999885

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.83  E-value=0.0023  Score=57.34  Aligned_cols=39  Identities=15%  Similarity=0.254  Sum_probs=35.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL  122 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~  122 (333)
                      ++|.|.|+ |.+|..++..|+++|++|++++++++..+..
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   40 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESA   40 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence            57999996 9999999999999999999999998776654

>PLN02602 lactate dehydrogenase

Probab=96.83  E-value=0.0028  Score=58.10  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=67.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|+|+ |.+|++++..|+..|  .++++++.++++++.......+     ....+ .+    ..+.  +.++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~----~~dy--~~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LA----STDY--AVTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-Ee----CCCH--HHhCCCCEE
Confidence            69999996 999999999999887  4799999987665433211101     11222 11    1123  347899999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      |-+||...-+   ...-.+.+..|..-...+.+.++. +- ..+|++|
T Consensus       110 VitAG~~~k~---g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        110 IVTAGARQIP---GESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             EECCCCCCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999975321   112234566677777777776643 32 3455555

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.82  E-value=0.0035  Score=56.71  Aligned_cols=114  Identities=12%  Similarity=0.138  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCC-ceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +++|.|.|+ |.+|..++..|+..|. +|++++++++..+......... ........++...++  +.+.++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence            368999998 9999999999998875 9999999876654322110000 000000011111122  3467899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEe
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS  201 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~S  201 (333)
                      +...-+   ...-.+...-|+.-...+++.+.. .-+ .+|+++
T Consensus        79 ~~p~~~---~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         79 GVPRKP---GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            864211   111112234566666666665533 323 455544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.81  E-value=0.0061  Score=52.59  Aligned_cols=107  Identities=18%  Similarity=0.224  Sum_probs=63.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------hhhh----ccCCCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLF----GKQDEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------~~~~----~~~~~~~~~~v  134 (333)
                      .+...+|+|.| .|++|+++++.|+..|. ++++++.+.-..                   +.+.    +..+.-+++.+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            34567899999 59999999999999995 677776543111                   1111    11012234455


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      ..+++ .+.+. +.+.++|+||.+...                  ...-..+.++++.....+|+.+..+.+
T Consensus        97 ~~~i~-~~~~~-~~~~~~DvVi~~~d~------------------~~~r~~l~~~~~~~~ip~i~~g~~g~~  148 (228)
T cd00757          97 NERLD-AENAE-ELIAGYDLVLDCTDN------------------FATRYLINDACVKLGKPLVSGAVLGFE  148 (228)
T ss_pred             cceeC-HHHHH-HHHhCCCEEEEcCCC------------------HHHHHHHHHHHHHcCCCEEEEEeccCE
Confidence            55552 34455 677889999998742                  122234445554433567776655443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.80  E-value=0.0079  Score=52.46  Aligned_cols=78  Identities=22%  Similarity=0.268  Sum_probs=50.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------hh----hhccCCCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TT----LFGKQDEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------~~----~~~~~~~~~~~~v  134 (333)
                      .+..++|+|.|+ |++|+++++.|+..|. ++++++.+.-..                   +.    +.+..+.-+++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            456679999997 9999999999999994 788887643111                   11    1111112334444


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcC
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ...+. ++.+. +.+.++|+||.+.
T Consensus       108 ~~~i~-~~~~~-~~~~~~DiVi~~~  130 (245)
T PRK05690        108 NARLD-DDELA-ALIAGHDLVLDCT  130 (245)
T ss_pred             eccCC-HHHHH-HHHhcCCEEEecC
Confidence            44443 23344 5678999999986

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.80  E-value=0.0055  Score=56.42  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcch
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK  118 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~  118 (333)
                      ++++|+|+||+|++|+++++.|++.. .+++++.++.+.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            34789999999999999999999875 588888666543

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.80  E-value=0.0068  Score=54.79  Aligned_cols=107  Identities=20%  Similarity=0.220  Sum_probs=65.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh----hhccCC-CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATT----LFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~----~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|.|+ |.+|..++..|+.+|  .+|+++++++++.+.    +..... .....+..+      +.  +.+.++|+|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~------d~--~~l~~aDiV   71 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG------DY--ADCKGADVV   71 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC------CH--HHhCCCCEE
Confidence            37999997 999999999999999  689999998866543    111000 011111111      22  347789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~S  201 (333)
                      |.+++...-+   .....+....|..-...+++.++. +.+ .++.++
T Consensus        72 iita~~~~~~---~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          72 VITAGANQKP---GETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EEccCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999874311   111223445577777777775533 333 444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.78  E-value=0.015  Score=50.25  Aligned_cols=105  Identities=14%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh-----------------------hccCCCCceEEEEccCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-----------------------FGKQDEETLQVCKGDTR  139 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~v~~D~~  139 (333)
                      +|||.| .|++|.++++.|+..|. ++++++.+.=....+                       .+..+.-+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            488998 59999999999999994 688888654211111                       11111334556666775


Q ss_pred             CcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       140 d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +........+++.|+||.+..                  |...-..+-+.+......+|..++.+-+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~D------------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNALD------------------NIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECCC------------------CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            544443257789999998753                  22333344445544335677766655444

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK08328 hypothetical protein; Provisional

Probab=96.78  E-value=0.0098  Score=51.40  Aligned_cols=108  Identities=18%  Similarity=0.198  Sum_probs=63.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh------------------------hccCCCCceEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTL------------------------FGKQDEETLQV  133 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~------------------------~~~~~~~~~~~  133 (333)
                      .+...+|+|.| .|++|++++..|+..| .++++++.+.-....+                        .+..+.-.++.
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            34567899999 5999999999999999 4688887543211111                        11111223344


Q ss_pred             EEccCCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       134 v~~D~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +...++ ++.+. +.+++.|+||.+...                  ...-..+-++++..-..+|+.++.+.+|
T Consensus       103 ~~~~~~-~~~~~-~~l~~~D~Vid~~d~------------------~~~r~~l~~~~~~~~ip~i~g~~~g~~G  156 (231)
T PRK08328        103 FVGRLS-EENID-EVLKGVDVIVDCLDN------------------FETRYLLDDYAHKKGIPLVHGAVEGTYG  156 (231)
T ss_pred             EeccCC-HHHHH-HHHhcCCEEEECCCC------------------HHHHHHHHHHHHHcCCCEEEEeeccCEE
Confidence            444443 33455 677889999988632                  1122233345544335677777666555

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.78  E-value=0.0048  Score=55.77  Aligned_cols=97  Identities=23%  Similarity=0.238  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+++|+|+|+. ++|...++.+...|++|++++|++++.+...+.    +...+. |-+|++..+ ...+.+|++|.+++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~i-~~~~~~~~~-~~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHVI-NSSDSDALE-AVKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEEE-EcCCchhhH-HhHhhCcEEEECCC
Confidence            47899999975 999999999988999999999999887655432    222221 222555555 44445999999997


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                       ..                  .....+++++. -++++.++-..
T Consensus       239 -~~------------------~~~~~l~~l~~-~G~~v~vG~~~  262 (339)
T COG1064         239 -PA------------------TLEPSLKALRR-GGTLVLVGLPG  262 (339)
T ss_pred             -hh------------------hHHHHHHHHhc-CCEEEEECCCC
Confidence             31                  12344455554 35888776543

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.77  E-value=0.0099  Score=53.62  Aligned_cols=107  Identities=13%  Similarity=0.143  Sum_probs=68.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC------C-CceEEEEccCCCcCCCchhhhcCCcE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------E-ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~------~-~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ||.|.|+ |.+|+.++..|+.+|  .++++++.++++++.......      . ..+.+..+|       . +.++++|+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y-~~~~~aDi   71 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------Y-DDCADADI   71 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------H-HHhCCCCE
Confidence            5889997 999999999999887  379999998765543221110      1 123333222       2 45778999


Q ss_pred             EEEcCCCCCCCCCCCCC-CCCCcchhHHHHHHHHHhcCC-CCCeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDG-DNTPEKVDWEGVRNLVSALPS-SLKRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~S  201 (333)
                      ||-.||...-+.  ..+ -.+.+..|..-...+...++. +...++.+-
T Consensus        72 vvitaG~~~kpg--~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (307)
T cd05290          72 IVITAGPSIDPG--NTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILI  118 (307)
T ss_pred             EEECCCCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            999999753221  110 144667788888888886643 444444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.77  E-value=0.0027  Score=60.28  Aligned_cols=68  Identities=19%  Similarity=0.261  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+|+|+||+|.+|..+++.|.+.|++|++++|+++........   .++.+       ..+.. +.+.++|+||.+...
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~---~gv~~-------~~~~~-e~~~~aDvVIlavp~   68 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE---LGVEY-------ANDNI-DAAKDADIVIISVPI   68 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH---cCCee-------ccCHH-HHhccCCEEEEecCH
Confidence            4799999999999999999999999999999987665433221   12211       11233 456678999988753

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.76  E-value=0.0077  Score=53.32  Aligned_cols=66  Identities=23%  Similarity=0.234  Sum_probs=48.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|.+.| .|-.|..++.+|+++||+|++++|++++..+...   ..++..       ..+.. ++..++|+||-+..-
T Consensus         2 kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~---~~Ga~~-------a~s~~-eaa~~aDvVitmv~~   67 (286)
T COG2084           2 KIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLA---AAGATV-------AASPA-EAAAEADVVITMLPD   67 (286)
T ss_pred             eEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHH---HcCCcc-------cCCHH-HHHHhCCEEEEecCC
Confidence            677888 7999999999999999999999999988433321   112221       12333 567789999998853

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.76  E-value=0.0021  Score=58.23  Aligned_cols=73  Identities=25%  Similarity=0.306  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|++++...+....   +..++.     .+++. +.+..+|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~~~~~-----~~~~~-~~l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GGNAVP-----LDELL-ELLNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CCeEEe-----HHHHH-HHHhcCCEEEEC
Confidence            46789999996 999999999999876 68999999988877665433   112222     22355 566789999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .+..
T Consensus       246 t~~~  249 (311)
T cd05213         246 TGAP  249 (311)
T ss_pred             CCCC
Confidence            8753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08223 hypothetical protein; Validated

Probab=96.75  E-value=0.015  Score=51.58  Aligned_cols=78  Identities=19%  Similarity=0.160  Sum_probs=51.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhh-----------------------hhccCCCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATT-----------------------LFGKQDEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-----------------------~~~~~~~~~~~~v  134 (333)
                      .+...+|+|.|+ |++|+.++..|+..| -++++++.+.=....                       +.+..+.-+++.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            455678999995 999999999999999 468888765311111                       1111112344555


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcC
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ...++ ++.+. ++++++|+||++.
T Consensus       103 ~~~l~-~~n~~-~ll~~~DlVvD~~  125 (287)
T PRK08223        103 PEGIG-KENAD-AFLDGVDVYVDGL  125 (287)
T ss_pred             ecccC-ccCHH-HHHhCCCEEEECC
Confidence            55554 34455 6788999999765

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.74  E-value=0.0066  Score=56.53  Aligned_cols=79  Identities=15%  Similarity=0.247  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhhhhhccCC--CCce--EEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD--EETL--QVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~~~~~~~--~~~~--~~v  134 (333)
                      .++.++|+|.|+ |++|++++..|+..|. ++++++++.                   .+.+.+.+...  .+.+  +.+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            356678999985 9999999999999996 788888862                   22222211110  2333  333


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcCC
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ...+.+ +.+. +.++++|+||++..
T Consensus       211 ~~~~~~-~~~~-~~~~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVE-ALLQDVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHH-HHHhCCCEEEECCC
Confidence            333332 3444 56789999999874

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.74  E-value=0.0029  Score=60.65  Aligned_cols=73  Identities=15%  Similarity=0.237  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+..   +...  .++.+   +.  .+.++|+||++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~---~~~~--~~~~~---~~--~l~~~DiVIna  397 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC---QGKA--FPLES---LP--ELHRIDIIINC  397 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---ccce--echhH---hc--ccCCCCEEEEc
Confidence            456789999995 89999999999999999999999987776654321   1111  12211   22  13578999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus       398 tP~g  401 (477)
T PRK09310        398 LPPS  401 (477)
T ss_pred             CCCC
Confidence            8653

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.73  E-value=0.0063  Score=55.61  Aligned_cols=100  Identities=14%  Similarity=0.090  Sum_probs=65.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|.|.| .|.||+.+++.|...|.+|++++|+.......     ..++        ...+++ +++..+|+|+.
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-----~~~~--------~~~~l~-ell~~aDiV~l  210 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEK-----ELGA--------EYRPLE-ELLRESDFVSL  210 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHH-----HcCC--------EecCHH-HHHhhCCEEEE
Confidence            467899999999 59999999999999999999999875432211     0011        123566 77889999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      +.....         +.   .++.+ ...++.++.+ .-||++|.....
T Consensus       211 ~lP~t~---------~T---~~~i~-~~~~~~mk~g-a~lIN~aRg~~v  245 (333)
T PRK13243        211 HVPLTK---------ET---YHMIN-EERLKLMKPT-AILVNTARGKVV  245 (333)
T ss_pred             eCCCCh---------HH---hhccC-HHHHhcCCCC-eEEEECcCchhc
Confidence            885431         00   01111 2345555544 477787766653

>PLN03139 formate dehydrogenase; Provisional

Probab=96.72  E-value=0.0072  Score=56.10  Aligned_cols=70  Identities=23%  Similarity=0.165  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.+++|.|.| .|.||+.+++.|...|.+|++++|+....+...    ..++       ...++++ +++..+|+|+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~----~~g~-------~~~~~l~-ell~~sDvV~l  261 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK----ETGA-------KFEEDLD-AMLPKCDVVVI  261 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh----hcCc-------eecCCHH-HHHhhCCEEEE
Confidence            467899999999 699999999999999999999988753222111    1111       1123577 78889999999


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +..
T Consensus       262 ~lP  264 (386)
T PLN03139        262 NTP  264 (386)
T ss_pred             eCC
Confidence            874

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.72  E-value=0.0082  Score=49.06  Aligned_cols=38  Identities=32%  Similarity=0.337  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ++.+++|+|.|+++.+|..+++.|.++|.+|+++.|+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            57889999999866789999999999999999999864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.71  E-value=0.01  Score=50.17  Aligned_cols=72  Identities=21%  Similarity=0.267  Sum_probs=49.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+++|||.|| |-+|...++.|++.|++|+++++...+ ...+..   ...+.+..-+      +....+.++|.||-
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~---~~~i~~~~~~------~~~~~l~~adlVia   76 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE---EGKIRWKQKE------FEPSDIVDAFLVIA   76 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh---CCCEEEEecC------CChhhcCCceEEEE
Confidence            567899999997 999999999999999999999875432 233321   2335543322      22134567898887


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +.+
T Consensus        77 aT~   79 (202)
T PRK06718         77 ATN   79 (202)
T ss_pred             cCC
Confidence            654

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.71  E-value=0.0033  Score=57.05  Aligned_cols=98  Identities=26%  Similarity=0.325  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~~~~~d~vi~~a  159 (333)
                      .+.+++|+||+|.+|.++++.+...|.+|+++++++++.+.+...  .. -.++  |..+ .+.+. + +.++|+|++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~--~~-~~~~--~~~~~~~~~~-~-~~~~d~v~~~~  234 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKEL--GA-DYVI--DGSKFSEDVK-K-LGGADVVIELV  234 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc--CC-cEEE--ecHHHHHHHH-h-ccCCCEEEECC
Confidence            457899999999999999999999999999999987766554321  11 1122  2211 11111 1 23799999998


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |..                   .....+++++. .+++|.++....
T Consensus       235 g~~-------------------~~~~~~~~~~~-~g~~v~~g~~~~  260 (332)
T cd08259         235 GSP-------------------TIEESLRSLNK-GGRLVLIGNVTP  260 (332)
T ss_pred             ChH-------------------HHHHHHHHhhc-CCEEEEEcCCCC
Confidence            742                   12334444443 357888776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.70  E-value=0.0028  Score=46.54  Aligned_cols=67  Identities=22%  Similarity=0.305  Sum_probs=48.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC---CeEEEE-EcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN---IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g---~~V~~~-~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ||.|.| +|.+|.+|++.|++.|   ++|++. .|++++.+++.+..   ++.+...      +.. ++++..|+||.+.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~---~~~~~~~------~~~-~~~~~advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY---GVQATAD------DNE-EAAQEADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC---TTEEESE------EHH-HHHHHTSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh---ccccccC------ChH-HhhccCCEEEEEE
Confidence            577785 7999999999999999   999955 99999888775432   2222211      233 5667899999988


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      -+
T Consensus        70 ~p   71 (96)
T PF03807_consen   70 KP   71 (96)
T ss_dssp             -G
T ss_pred             CH
Confidence            54

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=96.70  E-value=0.0058  Score=55.44  Aligned_cols=70  Identities=16%  Similarity=0.097  Sum_probs=52.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..+.+|++.|.| .|.||+++++.|...|.+|+++++-..+ .....             .+...++++ +++..+|+|+
T Consensus       138 ~el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~-------------~~~~~~~Ld-~lL~~sDiv~  202 (324)
T COG0111         138 TELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD-------------GVVGVDSLD-ELLAEADILT  202 (324)
T ss_pred             ccccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhccc-------------cceecccHH-HHHhhCCEEE
Confidence            367799999999 6999999999999999999999993322 21110             112235677 8899999998


Q ss_pred             EcCCCC
Q 019935          157 CCTGTT  162 (333)
Q Consensus       157 ~~a~~~  162 (333)
                      ......
T Consensus       203 lh~PlT  208 (324)
T COG0111         203 LHLPLT  208 (324)
T ss_pred             EcCCCC
Confidence            887543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.69  E-value=0.0042  Score=56.67  Aligned_cols=26  Identities=31%  Similarity=0.460  Sum_probs=23.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCe
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIK  108 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~  108 (333)
                      .+|.|+||||++|..+++.|.+++|.
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP   30 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFP   30 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCC
Confidence            68999999999999999999977653

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.69  E-value=0.009  Score=54.12  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=49.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-------CCceE--EEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-------EETLQ--VCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-------~~~~~--~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ++|.|.|+ |-+|+.++..|+..|++|++++++++..+.....+.       ..+..  .....+.-..+++ +++.++|
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~-~av~~aD   85 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIE-ACVADAD   85 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHH-HHhcCCC
Confidence            68999995 999999999999999999999998765443211000       00100  0001112223455 6778999


Q ss_pred             EEEEcCC
Q 019935          154 HVICCTG  160 (333)
Q Consensus       154 ~vi~~a~  160 (333)
                      .||-+..
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9999873

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.68  E-value=0.0052  Score=57.65  Aligned_cols=68  Identities=24%  Similarity=0.224  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++|+|+|. |.||+.++..|...|.+|+++++++.+.....    ..++++.        .++ ++++++|+||.+.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~----~~G~~v~--------~l~-eal~~aDVVI~aT  275 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA----MDGFRVM--------TME-EAAELGDIFVTAT  275 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH----hcCCEec--------CHH-HHHhCCCEEEECC
Confidence            56889999995 99999999999999999999999886653322    1133221        234 5677899999987


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      |.
T Consensus       276 G~  277 (425)
T PRK05476        276 GN  277 (425)
T ss_pred             CC
Confidence            53

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.68  E-value=0.016  Score=52.13  Aligned_cols=74  Identities=18%  Similarity=0.256  Sum_probs=49.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhh-----------------------hccCCCCceEEEEccCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTL-----------------------FGKQDEETLQVCKGDTR  139 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~v~~D~~  139 (333)
                      +|||.|+ |++|.++++.|+..| -++++++.+.-....+                       .+..+.-.++....++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899995 999999999999999 4688887643221111                       11111334555667776


Q ss_pred             CcCCCchhhhcCCcEEEEcC
Q 019935          140 NPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       140 d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +..... +.+++.|+||.+.
T Consensus        80 ~~~~~~-~f~~~~DvVv~a~   98 (312)
T cd01489          80 DPDFNV-EFFKQFDLVFNAL   98 (312)
T ss_pred             CccchH-HHHhcCCEEEECC
Confidence            643334 6778999999886

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.66  E-value=0.011  Score=51.33  Aligned_cols=37  Identities=30%  Similarity=0.297  Sum_probs=30.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~  116 (333)
                      .++..+|+|.| .|++|+.++..|+..| -++++++.+.
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            35567899999 5999999999999999 4788887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.66  E-value=0.0053  Score=55.40  Aligned_cols=113  Identities=18%  Similarity=0.103  Sum_probs=65.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhh-ccCCCCc-eEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF-GKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~-~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++|.|.|+ |.+|..++..|+..|+ +|+++++.++..+... ... ... .......+.--.+++ . +.++|+||-++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~-~~~~~~~~~~~i~~t~d~~-~-~~~aDiVIita   77 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMY-EASPVGGFDTKVTGTNNYA-D-TANSDIVVITA   77 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhh-hhhhccCCCcEEEecCCHH-H-hCCCCEEEEcC
Confidence            47999996 9999999999999886 8999998765433221 000 000 000001111112233 3 57899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEec
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSS  202 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS  202 (333)
                      |...-+   ...-.+.+..|..-...+++.+.. +- ..+|.+|-
T Consensus        78 g~p~~~---~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        78 GLPRKP---GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCCc---CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            864211   111123455788888888876643 32 34555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.65  E-value=0.0022  Score=60.36  Aligned_cols=109  Identities=15%  Similarity=0.095  Sum_probs=66.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC---C----CeEEEEEc--CcchhhhhhccCC------CCceEEEEccCCCcCCCchh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR---N----IKSRLLLR--DPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~---g----~~V~~~~R--~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~  147 (333)
                      -+|+||||+|.||.+|+-.+++-   |    ..+++++.  +.+.++...-...      ..++.+. .      ... +
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~------~~~-e  195 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T------DLD-V  195 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E------CCH-H
Confidence            47999999999999999999872   4    23566666  3443332211000      1122222 1      123 5


Q ss_pred             hhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC--CeEEEEec
Q 019935          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL--KRIVLVSS  202 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~--~~~v~~SS  202 (333)
                      .|+++|+||..+|...-   ....-.+..+.|..-...+.+++.. .-  .+|+.+.|
T Consensus       196 a~~daDvvIitag~prk---~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         196 AFKDAHVIVLLDDFLIK---EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             HhCCCCEEEECCCCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            78899999999997432   1222344667788888888877643 33  45665554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.64  E-value=0.015  Score=53.00  Aligned_cols=67  Identities=10%  Similarity=0.105  Sum_probs=51.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|.|.| .|.||+.+++.|...|++|++++|+++.....        +       .-..+++ ++++++|+|+.
T Consensus       142 ~~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~--------~-------~~~~~l~-ell~~aDiVil  204 (330)
T PRK12480        142 KPVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDF--------L-------TYKDSVK-EAIKDADIISL  204 (330)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh--------h-------hccCCHH-HHHhcCCEEEE
Confidence            356888999999 59999999999999999999999986432110        0       0123566 78889999998


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       205 ~lP~  208 (330)
T PRK12480        205 HVPA  208 (330)
T ss_pred             eCCC
Confidence            8753

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.62  E-value=0.016  Score=48.78  Aligned_cols=108  Identities=14%  Similarity=0.194  Sum_probs=65.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhh-------------------------hhccCCCCceEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATT-------------------------LFGKQDEETLQV  133 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-------------------------~~~~~~~~~~~~  133 (333)
                      ++..+|+|.|. |++|+++++.|+..| .++++++.+.-....                         +.+..+.-+++.
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            45568999996 559999999999999 468888865311110                         111112334444


Q ss_pred             EEccCCC-cCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          134 CKGDTRN-PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       134 v~~D~~d-~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +..++.+ .+... +.+..+|+||.+...                  ......+-+.++..-..+|+.++.+.+|
T Consensus        96 ~~~~~~~~~~~~~-~~~~~~dvVi~~~d~------------------~~~~~~ln~~c~~~~ip~i~~~~~G~~G  151 (198)
T cd01485          96 VEEDSLSNDSNIE-EYLQKFTLVIATEEN------------------YERTAKVNDVCRKHHIPFISCATYGLIG  151 (198)
T ss_pred             EecccccchhhHH-HHHhCCCEEEECCCC------------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            5555542 23344 667889999977421                  2233445556655335788888777766

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.61  E-value=0.0035  Score=58.13  Aligned_cols=74  Identities=27%  Similarity=0.318  Sum_probs=60.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+++|||.|| |=+|.-++++|.++| .+|+++.|+.++++.+.....        +++...+.+. ..+..+|+||.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~--------~~~~~l~el~-~~l~~~DvVis  244 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG--------AEAVALEELL-EALAEADVVIS  244 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC--------CeeecHHHHH-HhhhhCCEEEE
Confidence            368899999995 999999999999999 789999999999988875431        3333444566 67889999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +.+..
T Consensus       245 sTsa~  249 (414)
T COG0373         245 STSAP  249 (414)
T ss_pred             ecCCC
Confidence            98764

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.60  E-value=0.0084  Score=54.94  Aligned_cols=26  Identities=31%  Similarity=0.488  Sum_probs=23.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI  107 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~  107 (333)
                      ..+|.|.||||++|..+++.|.+++|
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC
Confidence            35899999999999999999998776

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.60  E-value=0.0073  Score=48.63  Aligned_cols=70  Identities=21%  Similarity=0.286  Sum_probs=47.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+|+++|+| =|.+|+.+++.|...|.+|++...+|-++-+..    ..++++.        .++ +++...|++|.+
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~----~dGf~v~--------~~~-~a~~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA----MDGFEVM--------TLE-EALRDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH----HTT-EEE---------HH-HHTTT-SEEEE-
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh----hcCcEec--------CHH-HHHhhCCEEEEC
Confidence            45788999999 599999999999999999999999986554332    3345433        245 667789999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .|..
T Consensus        86 TG~~   89 (162)
T PF00670_consen   86 TGNK   89 (162)
T ss_dssp             SSSS
T ss_pred             CCCc
Confidence            8864

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=96.59  E-value=0.0099  Score=53.23  Aligned_cols=60  Identities=22%  Similarity=0.237  Sum_probs=45.7

Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           90 GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        90 atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |.|.+|..+++.|++.|++|++++|++++.+.+.+    .++..       .++.. ++++++|+||-+...
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~----~g~~~-------~~s~~-~~~~~advVil~vp~   62 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVA----AGAQA-------AASPA-EAAEGADRVITMLPA   62 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----cCCee-------cCCHH-HHHhcCCEEEEeCCC
Confidence            47999999999999999999999999888776653    12211       12344 567889999998753

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.57  E-value=0.0041  Score=59.00  Aligned_cols=76  Identities=16%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC
Q 019935           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        79 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ++.+++||||+|                ||..|.+|++++..+|++|+++.-... ..      ...+++++..+  ...
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~V~--ta~  323 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIHVE--SAR  323 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEEec--CHH
Confidence            578999999986                799999999999999999999974322 11      03456655443  223


Q ss_pred             CCch---hhhcCCcEEEEcCCCCCC
Q 019935          143 DLDP---AIFEGVTHVICCTGTTAF  164 (333)
Q Consensus       143 ~~~~---~~~~~~d~vi~~a~~~~~  164 (333)
                      ++.+   +.+ ..|++|++|++..+
T Consensus       324 eM~~av~~~~-~~Di~I~aAAVaDy  347 (475)
T PRK13982        324 QMLAAVEAAL-PADIAIFAAAVADW  347 (475)
T ss_pred             HHHHHHHhhC-CCCEEEEeccccce
Confidence            3331   222 37999999998653

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.57  E-value=0.0029  Score=51.24  Aligned_cols=75  Identities=19%  Similarity=0.274  Sum_probs=49.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ||.|.|| |..|.+++..|+.+|++|+++.|+++..+.+.....    .+++..-. .+.=-.+++ ++++++|+||.+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~-~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLE-EALEDADIIIIAV   77 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHH-HHHTT-SEEEE-S
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHH-HHhCcccEEEecc
Confidence            6889995 999999999999999999999999877666543211    11111110 111123455 6788999999876


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      ..
T Consensus        78 Ps   79 (157)
T PF01210_consen   78 PS   79 (157)
T ss_dssp             -G
T ss_pred             cH
Confidence            43

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.56  E-value=0.018  Score=48.56  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhhh---------------h----hccCCCCceEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATT---------------L----FGKQDEETLQVCK  135 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~~---------------~----~~~~~~~~~~~v~  135 (333)
                      .+..++|+|.|+ |++|+.++..|++.|. ++++++++   .+....               .    ....+..+++.+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            345678999996 9999999999999997 69999887   222111               0    0000122344444


Q ss_pred             ccCCCcCCCchhhhcCCcEEEEcC
Q 019935          136 GDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       136 ~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      .+++ .+.+. +.++++|+||.+.
T Consensus        97 ~~i~-~~~~~-~~~~~~DlVi~a~  118 (200)
T TIGR02354        97 EKIT-EENID-KFFKDADIVCEAF  118 (200)
T ss_pred             eeCC-HhHHH-HHhcCCCEEEECC
Confidence            5553 34455 6788899999883

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.56  E-value=0.013  Score=48.29  Aligned_cols=73  Identities=19%  Similarity=0.237  Sum_probs=48.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc------------------hhhhhh----ccCCCCceEEEEccCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE------------------KATTLF----GKQDEETLQVCKGDTRN  140 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~------------------~~~~~~----~~~~~~~~~~v~~D~~d  140 (333)
                      +|+|.|+ |++|++++..|++.|. ++++++.+.-                  +.+...    +..+.-+++.+...+.+
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            4899995 9999999999999996 5999987651                  111111    11112344445555533


Q ss_pred             cCCCchhhhcCCcEEEEcC
Q 019935          141 PKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       141 ~~~~~~~~~~~~d~vi~~a  159 (333)
                       +.+. +.++++|+||.+.
T Consensus        80 -~~~~-~~l~~~DlVi~~~   96 (174)
T cd01487          80 -NNLE-GLFGDCDIVVEAF   96 (174)
T ss_pred             -hhHH-HHhcCCCEEEECC
Confidence             4455 6788999999985

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.54  E-value=0.022  Score=52.25  Aligned_cols=95  Identities=18%  Similarity=0.153  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~vi  156 (333)
                      .+.+|+|+|+ |.+|...++.+...|. +|+++++++++.+...+.    ++..+ .|..+. ++. +..   .++|+||
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l----Ga~~v-i~~~~~-~~~-~~~~~~g~~D~vi  240 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM----GADKL-VNPQND-DLD-HYKAEKGYFDVSF  240 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc----CCcEE-ecCCcc-cHH-HHhccCCCCCEEE
Confidence            4679999986 9999999998888897 688899988776654432    22221 233332 222 221   2489999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      .+.|..                  ......+++++.+ ++++.++.
T Consensus       241 d~~G~~------------------~~~~~~~~~l~~~-G~iv~~G~  267 (343)
T PRK09880        241 EVSGHP------------------SSINTCLEVTRAK-GVMVQVGM  267 (343)
T ss_pred             ECCCCH------------------HHHHHHHHHhhcC-CEEEEEcc
Confidence            998741                  1223455556554 58888764

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.54  E-value=0.0079  Score=53.95  Aligned_cols=74  Identities=20%  Similarity=0.260  Sum_probs=55.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC------CCchhhhcCCcEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------DLDPAIFEGVTHVI  156 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~------~~~~~~~~~~d~vi  156 (333)
                      ++|.|.|+ |.-|.+|+..|+++|++|++..|+++..+.+...  ..+..++. |+.-++      ++. ++++++|+|+
T Consensus         2 ~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~--~~N~~yLp-~i~lp~~l~at~Dl~-~a~~~ad~iv   76 (329)
T COG0240           2 MKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINET--RENPKYLP-GILLPPNLKATTDLA-EALDGADIIV   76 (329)
T ss_pred             ceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhc--CcCccccC-CccCCcccccccCHH-HHHhcCCEEE
Confidence            58999995 8999999999999999999999999887776543  23344443 443333      444 6677889888


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      -....
T Consensus        77 ~avPs   81 (329)
T COG0240          77 IAVPS   81 (329)
T ss_pred             EECCh
Confidence            87643

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.54  E-value=0.01  Score=55.92  Aligned_cols=76  Identities=25%  Similarity=0.253  Sum_probs=50.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEE-----E-EccCCCcCCCchhhhcCCcE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQV-----C-KGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~-----v-~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +|.|.| .|++|..++..|++.|++|+++++++++.+.+.....   .++++-     + .+.+.-..+.. ++++++|+
T Consensus         2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~-~~~~~adv   79 (411)
T TIGR03026         2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYE-DAIRDADV   79 (411)
T ss_pred             EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHH-HHHhhCCE
Confidence            688998 6999999999999999999999999988776543110   000000     0 00011112334 45678999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||-+.+.
T Consensus        80 vii~vpt   86 (411)
T TIGR03026        80 IIICVPT   86 (411)
T ss_pred             EEEEeCC
Confidence            9999865

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.52  E-value=0.015  Score=53.63  Aligned_cols=79  Identities=11%  Similarity=0.138  Sum_probs=52.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------hh----hhccCCCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TT----LFGKQDEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------~~----~~~~~~~~~~~~v  134 (333)
                      .++..+|+|.|+ |++|++++..|+..|. ++++++.+.-..                   +.    +.+..+.-+++.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            456679999995 9999999999999994 788888754111                   11    1111112334445


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcCC
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ...++. +... +.++++|+||.+..
T Consensus       104 ~~~i~~-~~~~-~~~~~~DvVvd~~d  127 (355)
T PRK05597        104 VRRLTW-SNAL-DELRDADVILDGSD  127 (355)
T ss_pred             EeecCH-HHHH-HHHhCCCEEEECCC
Confidence            555543 3344 57889999999873

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.52  E-value=0.0096  Score=57.18  Aligned_cols=105  Identities=17%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC------------CCch--
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------------DLDP--  146 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~------------~~~~--  146 (333)
                      .+.+|+|+|+ |-+|...+..+...|++|+++++++++.+...+    -+.+++..|..+.+            .+.+  
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~  238 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAE  238 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEEeccccccccccchhhhcchhHHHHH
Confidence            4679999995 999999999999999999999999887766552    34454444433221            1000  


Q ss_pred             -----hhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          147 -----AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       147 -----~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                           +..+++|+||.+++....+     .+       ..-+...++.++.| ..+|.++..
T Consensus       239 ~~~~~~~~~gaDVVIetag~pg~~-----aP-------~lit~~~v~~mkpG-gvIVdvg~~  287 (509)
T PRK09424        239 MALFAEQAKEVDIIITTALIPGKP-----AP-------KLITAEMVASMKPG-SVIVDLAAE  287 (509)
T ss_pred             HHHHHhccCCCCEEEECCCCCccc-----Cc-------chHHHHHHHhcCCC-CEEEEEccC
Confidence                 1125799999999863210     00       01134566666654 477877753

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.51  E-value=0.009  Score=55.90  Aligned_cols=69  Identities=23%  Similarity=0.239  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|+|.|+ |.||+.++..+...|.+|+++++++.+.....    ..+++.+  +      ++ +.+.++|+||.+
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~----~~G~~~~--~------~~-e~v~~aDVVI~a  264 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA----MEGYEVM--T------ME-EAVKEGDIFVTT  264 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH----hcCCEEc--c------HH-HHHcCCCEEEEC
Confidence            356889999995 99999999999999999999999887655433    2233322  1      23 456789999998


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      +|.
T Consensus       265 tG~  267 (413)
T cd00401         265 TGN  267 (413)
T ss_pred             CCC
Confidence            864

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.50  E-value=0.015  Score=49.27  Aligned_cols=72  Identities=26%  Similarity=0.286  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+++|||.|| |.+|..-++.|++.|++|++++.+.. ....+..   ..+++++..+...      ..+.+++.||-
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~~------~dl~~~~lVi~   75 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFDA------DILEGAFLVIA   75 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCCH------HHhCCcEEEEE
Confidence            467789999996 99999999999999999999987654 2333332   3478888877642      33567888887


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +.+
T Consensus        76 at~   78 (205)
T TIGR01470        76 ATD   78 (205)
T ss_pred             CCC
Confidence            654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.50  E-value=0.0041  Score=57.59  Aligned_cols=108  Identities=15%  Similarity=0.139  Sum_probs=66.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-e----EEE--E--EcCcchhhhhhccCCC------CceEEEEccCCCcCCCchh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-K----SRL--L--LRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~----V~~--~--~R~~~~~~~~~~~~~~------~~~~~v~~D~~d~~~~~~~  147 (333)
                      -+|.|+|++|.+|++++-.|+..|. .    |.+  +  +++.++++...-...+      .++.+. .     +. . +
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~-----~~-y-~  116 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I-----DP-Y-E  116 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c-----CC-H-H
Confidence            4899999999999999999998762 2    333  3  6666665433211101      112111 1     12 2 4


Q ss_pred             hhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CC-eEEEEe
Q 019935          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVS  201 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~-~~v~~S  201 (333)
                      .++++|+||..||...-+   ...-.+.++.|..-...+.+.++. . .. .+|.+|
T Consensus       117 ~~kdaDIVVitAG~prkp---g~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGP---GMERADLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             HhCCCCEEEECCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence            678999999999975322   223344677788888888887643 2 33 455554

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.48  E-value=0.017  Score=50.85  Aligned_cols=67  Identities=19%  Similarity=0.195  Sum_probs=46.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEE-EEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|.|+|++|.+|+.+++.+.+. +.++++ ++++++.....           -..++...++++ +++.++|+||+++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~~~~dl~-~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVAITDDLE-AVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCccccCCHH-HhccCCCEEEECCC
Confidence            58999999999999999998864 688776 45554433221           112333345566 56668999999885


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      +
T Consensus        70 p   70 (257)
T PRK00048         70 P   70 (257)
T ss_pred             H
Confidence            4

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.48  E-value=0.018  Score=46.56  Aligned_cols=70  Identities=13%  Similarity=0.138  Sum_probs=46.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.+++|+|.|| |-+|...++.|++.|++|++++  ++..+++..   ...+++..-      .+++.-+.+.|.||-
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~---l~~i~~~~~------~~~~~dl~~a~lVia   76 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKE---LPYITWKQK------TFSNDDIKDAHLIYA   76 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh---ccCcEEEec------ccChhcCCCceEEEE
Confidence            3567899999996 9999999999999999999885  333333332   123343322      222233456788887


Q ss_pred             cC
Q 019935          158 CT  159 (333)
Q Consensus       158 ~a  159 (333)
                      +.
T Consensus        77 aT   78 (157)
T PRK06719         77 AT   78 (157)
T ss_pred             CC
Confidence            65

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.48  E-value=0.026  Score=47.44  Aligned_cols=106  Identities=13%  Similarity=0.113  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchh-------------------hh----hhccCCCCceEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TT----LFGKQDEETLQVCK  135 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~-------------------~~----~~~~~~~~~~~~v~  135 (333)
                      ++..+|+|.|+ |++|.++++.|+..|. ++++++.+.-..                   +.    +.+..+.-+++...
T Consensus        19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            45678999985 6699999999999995 688887542111                   11    11111123444444


Q ss_pred             ccCCCcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       136 ~D~~d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      ..+.  +... +.+.++|+||.+...                  ......+-+.++..-..+|+.++.+.++
T Consensus        98 ~~~~--~~~~-~~~~~~dvVi~~~~~------------------~~~~~~ln~~c~~~~ip~i~~~~~G~~G  148 (197)
T cd01492          98 DDIS--EKPE-EFFSQFDVVVATELS------------------RAELVKINELCRKLGVKFYATGVHGLFG  148 (197)
T ss_pred             cCcc--ccHH-HHHhCCCEEEECCCC------------------HHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence            4444  2234 567899999987521                  1223444456654334678777766655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.47  E-value=0.027  Score=44.70  Aligned_cols=101  Identities=21%  Similarity=0.222  Sum_probs=60.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch-------------------hhhhh----ccCCCCceEEEEccCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK-------------------ATTLF----GKQDEETLQVCKGDTR  139 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~-------------------~~~~~----~~~~~~~~~~v~~D~~  139 (333)
                      +|+|.|+ |++|+++++.|+..|. ++++++.+.-.                   .+.+.    +..+.-+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4899995 9999999999999996 68888765211                   11111    1111223344444443


Q ss_pred             CcCCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       140 d~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +.. .. ..+.+.|+||.+...                  ......+.+.++.....+|..++.+.
T Consensus        80 ~~~-~~-~~~~~~diVi~~~d~------------------~~~~~~l~~~~~~~~i~~i~~~~~g~  125 (143)
T cd01483          80 EDN-LD-DFLDGVDLVIDAIDN------------------IAVRRALNRACKELGIPVIDAGGLGL  125 (143)
T ss_pred             hhh-HH-HHhcCCCEEEECCCC------------------HHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence            322 23 567889999998742                  23345555666553356776666553

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.43  E-value=0.0037  Score=56.63  Aligned_cols=75  Identities=21%  Similarity=0.189  Sum_probs=63.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC-CCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~-~~~~~~~~~~d~vi~~a  159 (333)
                      +++||+.| +||+-+.++..|.+++ .+|++.+|....++++..   +.+++.+..|+.|++ .++ ......|.++.+.
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~---~~~~~av~ldv~~~~~~L~-~~v~~~D~viSLl   76 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVK---GINIKAVSLDVADEELALR-KEVKPLDLVISLL   76 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhc---CCCccceEEEccchHHHHH-hhhcccceeeeec
Confidence            56899999 6999999999999885 789999998888888765   556899999999988 777 7788889998887


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      ..
T Consensus        77 P~   78 (445)
T KOG0172|consen   77 PY   78 (445)
T ss_pred             cc
Confidence            54

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.42  E-value=0.012  Score=52.35  Aligned_cols=62  Identities=21%  Similarity=0.270  Sum_probs=45.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD  145 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~  145 (333)
                      +..+|+|.|.|.+|.+|+.++..|+++|+.|+++.|......+..     .+..++..=+.++..+.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~-----~~ADIVIsavg~~~~v~  217 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALC-----RQADIVVAAVGRPRLID  217 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHH-----hcCCEEEEecCChhccc
Confidence            678999999999999999999999999999999977654333322     12333334444555555

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.42  E-value=0.0067  Score=55.18  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=35.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~  124 (333)
                      ++|.|.|+ |.+|..++..|++.|++|++++|+++..+.+..
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   42 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINA   42 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            57999994 999999999999999999999999877666543

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.42  E-value=0.024  Score=54.23  Aligned_cols=71  Identities=21%  Similarity=0.198  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~vi~~a  159 (333)
                      .+|.|.| .|-+|..+++.|+++|++|++.+|++++.+.+.+.....+..+..     .++++ +++   +++|+||-+.
T Consensus         2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~-----~~s~~-e~v~~l~~~d~Iil~v   74 (470)
T PTZ00142          2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKG-----YHTLE-ELVNSLKKPRKVILLI   74 (470)
T ss_pred             CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCccee-----cCCHH-HHHhcCCCCCEEEEEe
Confidence            3689999 699999999999999999999999999887775421111221111     12333 333   3589888775


Q ss_pred             C
Q 019935          160 G  160 (333)
Q Consensus       160 ~  160 (333)
                      .
T Consensus        75 ~   75 (470)
T PTZ00142         75 K   75 (470)
T ss_pred             C
Confidence            4

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.40  E-value=0.0084  Score=53.88  Aligned_cols=76  Identities=24%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh--cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~--~~~d~vi  156 (333)
                      .+++++|+|++|.+|..+++.+...|.+|+++++++++.+.+...    ++.. ..|..+++..+.  ...  +++|.++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQA----GADA-VFNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence            467999999999999999999999999999999988766555321    2211 123333332220  111  3689999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      ++++.
T Consensus       219 ~~~~~  223 (325)
T cd08253         219 EVLAN  223 (325)
T ss_pred             ECCch
Confidence            99863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.39  E-value=0.012  Score=55.79  Aligned_cols=69  Identities=26%  Similarity=0.277  Sum_probs=51.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+++|+|.| -|.||+.+++.|...|.+|+++.+++.+.....    ..+++++        .++ ++++.+|+||.+
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~----~~G~~~~--------~le-ell~~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAA----MEGYQVV--------TLE-DVVETADIFVTA  316 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH----hcCceec--------cHH-HHHhcCCEEEEC
Confidence            57889999999 588999999999999999999988876543221    1133221        245 667889999998


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      .|.
T Consensus       317 tGt  319 (476)
T PTZ00075        317 TGN  319 (476)
T ss_pred             CCc
Confidence            753

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.37  E-value=0.0089  Score=53.84  Aligned_cols=106  Identities=20%  Similarity=0.175  Sum_probs=67.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           85 VLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      |.|.|+ |++|..++..|+..|  .+++++++++++.+.......+     ....+..+     .+ . +.+.++|+||.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~-----~~-~-~~l~~aDiVIi   72 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG-----GD-Y-ADAADADIVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC-----CC-H-HHhCCCCEEEE
Confidence            468886 899999999999988  6899999988766544321110     11122111     11 2 46789999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ++|...-   ....-.+.+..|+.-...+.+.+++ +- ..++.+|
T Consensus        73 tag~p~~---~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          73 TAGAPRK---PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             cCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9987431   1222234566687778888876644 33 3455554

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.35  E-value=0.0082  Score=54.44  Aligned_cols=100  Identities=16%  Similarity=0.145  Sum_probs=64.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh-cCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF-EGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~-~~~d~vi~  157 (333)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+.    ++..+ .|..+++..++  +.. .++|+|++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~----Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld  217 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKEL----GFDAV-FNYKTVSLEEALKEAAPDGIDCYFD  217 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCEE-EeCCCccHHHHHHHHCCCCcEEEEE
Confidence            467999999999999999999988999999999988776665432    22211 23333221110  111 36899999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +.|..                   .....++.++.+ ++|+.++....
T Consensus       218 ~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~~  245 (329)
T cd08294         218 NVGGE-------------------FSSTVLSHMNDF-GRVAVCGSIST  245 (329)
T ss_pred             CCCHH-------------------HHHHHHHhhccC-CEEEEEcchhc
Confidence            87631                   123444555443 58888775543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.34  E-value=0.017  Score=52.35  Aligned_cols=66  Identities=12%  Similarity=0.079  Sum_probs=50.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+|++.|.| .|.||+.+++.|...|.+|++++|.....        ...+        ...+++ +++..+|+|+.
T Consensus       141 ~~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~--------~~~~--------~~~~l~-ell~~sDvv~l  202 (311)
T PRK08410        141 GEIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK--------NEEY--------ERVSLE-ELLKTSDIISI  202 (311)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc--------ccCc--------eeecHH-HHhhcCCEEEE
Confidence            467899999999 69999999999999999999998853211        1111        123577 78889999988


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       203 h~Pl  206 (311)
T PRK08410        203 HAPL  206 (311)
T ss_pred             eCCC
Confidence            8754

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.33  E-value=0.0072  Score=56.17  Aligned_cols=35  Identities=29%  Similarity=0.514  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      ..++|.|.||.|.+|..++..|.+.|++|++++|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            44789999999999999999999999999999985

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.33  E-value=0.016  Score=52.10  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=65.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ...+.+++|.|.| .|.||+++++.|...|.+|++++|+...          .++..      ...+++ +++..+|+|+
T Consensus       117 ~~~L~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~----------~~~~~------~~~~l~-ell~~aDiv~  178 (303)
T PRK06436        117 TKLLYNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVN----------DGISS------IYMEPE-DIMKKSDFVL  178 (303)
T ss_pred             CCCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcc----------cCccc------ccCCHH-HHHhhCCEEE
Confidence            3467899999999 6999999999888889999999987421          11110      023567 7888999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      .+.....       .-..++  |    ...++.++.| .-||++|...+.
T Consensus       179 ~~lp~t~-------~T~~li--~----~~~l~~mk~g-a~lIN~sRG~~v  214 (303)
T PRK06436        179 ISLPLTD-------ETRGMI--N----SKMLSLFRKG-LAIINVARADVV  214 (303)
T ss_pred             ECCCCCc-------hhhcCc--C----HHHHhcCCCC-eEEEECCCcccc
Confidence            9886431       001111  1    3445556654 477887766654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.33  E-value=0.046  Score=52.48  Aligned_cols=104  Identities=17%  Similarity=0.130  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC-----------------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-----------------  143 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~-----------------  143 (333)
                      .+.+++|.|+ |.+|...+..+...|.+|+++++++++.+...    .-+.+++..|..+..+                 
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~  237 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAE  237 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCeEEeccccccccccccceeecCHHHHHHH
Confidence            3569999995 99999999999999999999999987765544    2345666666432110                 


Q ss_pred             ---CchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          144 ---LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       144 ---~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                         +. +..+++|+||+++-+...+     .+       ..-+...++.++.| ..||-+|+.
T Consensus       238 ~~~~~-e~~~~~DIVI~TalipG~~-----aP-------~Lit~emv~~MKpG-svIVDlA~d  286 (511)
T TIGR00561       238 MELFA-AQAKEVDIIITTALIPGKP-----AP-------KLITEEMVDSMKAG-SVIVDLAAE  286 (511)
T ss_pred             HHHHH-HHhCCCCEEEECcccCCCC-----CC-------eeehHHHHhhCCCC-CEEEEeeeC
Confidence               11 2345899999999432210     00       01134456666654 356666654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.32  E-value=0.0078  Score=55.10  Aligned_cols=97  Identities=15%  Similarity=0.187  Sum_probs=62.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh-cCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~-~~~d~vi~  157 (333)
                      .+|||+||+|.+|..+++.+...|+ +|+++++++++.+.+....   ++..+ .|..+. ++.+   +.. +++|+||+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v-i~~~~~-~~~~~i~~~~~~gvd~vid  230 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA-INYKTD-NVAERLRELCPEGVDVYFD  230 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE-EECCCC-CHHHHHHHHCCCCceEEEE
Confidence            7999999999999999998888898 7999999887766554311   22211 232222 2221   111 37999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      +.|..                   .....++.++. .++||.++...
T Consensus       231 ~~g~~-------------------~~~~~~~~l~~-~G~iv~~G~~~  257 (345)
T cd08293         231 NVGGE-------------------ISDTVISQMNE-NSHIILCGQIS  257 (345)
T ss_pred             CCCcH-------------------HHHHHHHHhcc-CCEEEEEeeee
Confidence            88641                   12334455554 35888877543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.32  E-value=0.015  Score=50.54  Aligned_cols=114  Identities=17%  Similarity=0.161  Sum_probs=67.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+.+|.|.||+|+||+.|...|-...  .+..+++-... ....-.+.+ ..+.  ......-++.++ .++.++|+||-
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI-~T~s--~V~g~~g~~~L~-~al~~advVvI  102 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI-NTNS--SVVGFTGADGLE-NALKGADVVVI  102 (345)
T ss_pred             CcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc-CCCC--ceeccCChhHHH-HHhcCCCEEEe
Confidence            34689999999999999987765432  23334433211 111111111 1111  112223355777 88999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCC--CeEEEEe
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL--KRIVLVS  201 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~S  201 (333)
                      -||.-+-|.   -.-.+.|++|..-...|..++.+.+  ..+.++|
T Consensus       103 PAGVPRKPG---MTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  103 PAGVPRKPG---MTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             cCCCCCCCC---CcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            999754332   2224589999999999998774422  3444544

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.30  E-value=0.024  Score=52.53  Aligned_cols=80  Identities=20%  Similarity=0.217  Sum_probs=52.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhh-------------------hh----ccCCCCceEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATT-------------------LF----GKQDEETLQV  133 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-------------------~~----~~~~~~~~~~  133 (333)
                      ..++..+|+|.|+ |++|++++..|+..| .++++++.+.=....                   ..    +..+.-+++.
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3456678999995 999999999999999 488888876311111                   11    1101223445


Q ss_pred             EEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935          134 CKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       134 v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +...++ ++... ++++++|+||.+.-
T Consensus       116 ~~~~i~-~~~~~-~~~~~~DlVid~~D  140 (370)
T PRK05600        116 LRERLT-AENAV-ELLNGVDLVLDGSD  140 (370)
T ss_pred             eeeecC-HHHHH-HHHhCCCEEEECCC
Confidence            554553 33455 67889999999873

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.30  E-value=0.051  Score=48.97  Aligned_cols=39  Identities=23%  Similarity=0.229  Sum_probs=35.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      +|.|.| .|.+|+.+++.|++.|++|++++|++++.+.+.
T Consensus         2 ~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~   40 (301)
T PRK09599          2 QLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALA   40 (301)
T ss_pred             EEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            688998 799999999999999999999999988877664

>PLN02494 adenosylhomocysteinase

Probab=96.29  E-value=0.012  Score=55.51  Aligned_cols=68  Identities=22%  Similarity=0.297  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++|+|.| .|.||+.+++.|...|.+|+++.+++.+.....    ..++.++        .++ +++...|+||.+.
T Consensus       252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~----~~G~~vv--------~le-Eal~~ADVVI~tT  317 (477)
T PLN02494        252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQAL----MEGYQVL--------TLE-DVVSEADIFVTTT  317 (477)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH----hcCCeec--------cHH-HHHhhCCEEEECC
Confidence            5689999999 589999999999999999999999876543222    2233321        244 5677899999876


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      |.
T Consensus       318 Gt  319 (477)
T PLN02494        318 GN  319 (477)
T ss_pred             CC
Confidence            64

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.25  E-value=0.012  Score=54.27  Aligned_cols=100  Identities=22%  Similarity=0.198  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh-cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~-~~~d~vi  156 (333)
                      .+.+|||+|++|.+|..+++.+...|.+|+++++++++.+.+....   ++..+ .|..+.+.+.+   +.. .++|++|
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v-i~~~~~~~~~~~i~~~~~~gvD~v~  233 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA-FNYKEEPDLDAALKRYFPEGIDIYF  233 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE-EECCCcccHHHHHHHHCCCCcEEEE
Confidence            4679999999999999999988889999999988887766543111   22211 23322222321   111 3689999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ++.|..                   .....++.++.+ ++++.++...
T Consensus       234 d~vG~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  261 (348)
T PLN03154        234 DNVGGD-------------------MLDAALLNMKIH-GRIAVCGMVS  261 (348)
T ss_pred             ECCCHH-------------------HHHHHHHHhccC-CEEEEECccc
Confidence            998731                   123445555543 5788776543

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.24  E-value=0.022  Score=52.12  Aligned_cols=78  Identities=23%  Similarity=0.207  Sum_probs=54.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceE-EEEccC-----CCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQ-VCKGDT-----RNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~-~v~~D~-----~d~~~~~~~~~~~~d  153 (333)
                      |+|-|.| +|++|...+..|++.||+|+|++.++++.+.+.....   .++++ +++-+.     +=-.+.+ +++...|
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~-~a~~~ad   78 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYE-EAVKDAD   78 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHH-HHHhcCC
Confidence            5788999 7999999999999999999999999988877643221   12211 111111     1112344 5677899


Q ss_pred             EEEEcCCCC
Q 019935          154 HVICCTGTT  162 (333)
Q Consensus       154 ~vi~~a~~~  162 (333)
                      ++|-+.|.-
T Consensus        79 v~fIavgTP   87 (414)
T COG1004          79 VVFIAVGTP   87 (414)
T ss_pred             EEEEEcCCC
Confidence            999998863

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=96.23  E-value=0.074  Score=47.41  Aligned_cols=224  Identities=15%  Similarity=0.162  Sum_probs=118.0

Q ss_pred             CeEEEEcC-CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------c----
Q 019935           83 KLVLVAGG-SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E----  150 (333)
Q Consensus        83 ~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~----  150 (333)
                      ..|+|.|. +--+++.++.-|-++|+-|++++.+.+..+.+..+. ...+..+..|..|+.... ..+       .    
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-~~dI~~L~ld~~~~~~~~-~~l~~f~~~L~~p~~   81 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-RPDIRPLWLDDSDPSSIH-ASLSRFASLLSRPHV   81 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-CCCCCCcccCCCCCcchH-HHHHHHHHHhcCCCC
Confidence            47999995 789999999999999999999999988777665544 445777778887766655 222       1    


Q ss_pred             ---CC-cEEEEcCCCCCCCCCCC--C--------CCCCCcchhHHHHHHHHH----hcCC---CCCeEEEEe-ccccccC
Q 019935          151 ---GV-THVICCTGTTAFPSRRW--D--------GDNTPEKVDWEGVRNLVS----ALPS---SLKRIVLVS-SVGVTKF  208 (333)
Q Consensus       151 ---~~-d~vi~~a~~~~~~~~~~--~--------~~~~~~~~n~~~~~~l~~----a~~~---~~~~~v~~S-S~~~~~~  208 (333)
                         +. .+..++.+..-+|...+  .        ...+.+..|+......++    .++.   .-.++|++. |+...- 
T Consensus        82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl-  160 (299)
T PF08643_consen   82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSL-  160 (299)
T ss_pred             CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhcc-
Confidence               11 12222222211111111  0        111123334433333333    3333   345666554 332211 


Q ss_pred             CCCCccchh---hhHHHHHHHHHHHHHHhcCCCEEEEEcccccCCC---CCCc-----------chHHHHHHhhccccee
Q 019935          209 NELPWSIMN---LFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGP---YTSY-----------DLNTLLKATAGERRAV  271 (333)
Q Consensus       209 ~~~~~~~~~---~~~~~k~k~~~e~~l~~~gi~~~~vrpg~~~~g~---~~~~-----------~~~~~~~~~~~~~~~~  271 (333)
                       ..|+....   .-+.......+.++++..+++++.++.|.+-.|.   ...+           .|+...+.+-+.....
T Consensus       161 -~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~~~~s~~~~~~~~~se~~~W~~~~r~lY~~~y~~  239 (299)
T PF08643_consen  161 -NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNFGQPSNYKYLSLAGSEVLAWTSIMRALYGPNYSS  239 (299)
T ss_pred             -CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccCCCcccccccccCCCCcccCchhHHhhhchhHHH
Confidence             11222111   1123333466677788889999999999775442   1111           1222222222211111


Q ss_pred             ecC----CCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          272 LMG----QGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       272 ~~~----~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      ...    .+.....--...++-.++..++.... .+.++.++-|
T Consensus       240 ~~~~~~~~~~~~~~Gs~lr~L~~~vfd~~~~~~-~~~v~y~G~G  282 (299)
T PF08643_consen  240 IQSSAIPAGSGRGKGSSLRELHNAVFDALYGSS-KGSVVYVGRG  282 (299)
T ss_pred             HHhhccCCCCCCCCCCHHHHHHHHHHHhhcCCC-CCCEEEEcCc
Confidence            110    01111123445677788888887643 4678888765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.23  E-value=0.024  Score=53.09  Aligned_cols=78  Identities=15%  Similarity=0.168  Sum_probs=49.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh-----------------------hccCCCCceEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-----------------------FGKQDEETLQVC  134 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~v  134 (333)
                      .++..+|+|.| .|++|++++..|+..|. ++++++.+.-....+                       .+..+.-+++.+
T Consensus        39 ~L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            34567899999 49999999999999995 677777543111111                       111112234444


Q ss_pred             EccCCCcCCCchhhhcCCcEEEEcC
Q 019935          135 KGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus       135 ~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++. +... ++++++|+||.+.
T Consensus       118 ~~~i~~-~~~~-~~~~~~D~Vvd~~  140 (392)
T PRK07878        118 EFRLDP-SNAV-ELFSQYDLILDGT  140 (392)
T ss_pred             eccCCh-hHHH-HHHhcCCEEEECC
Confidence            555543 3344 6788999999876

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.21  E-value=0.012  Score=54.92  Aligned_cols=71  Identities=10%  Similarity=0.108  Sum_probs=56.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++|.|. |.+|+.++++|.++|.+|++++.+.  .+...    ..+..++.+|.+|++.+++.-+++++.||-+.
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~--~~~~~----~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG--LEHRL----PDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch--hhhhc----cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            357999995 8999999999999999999888652  22222    44678999999999988855677899998765

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.20  E-value=0.016  Score=54.07  Aligned_cols=69  Identities=20%  Similarity=0.182  Sum_probs=50.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|+|.| .|.||+.+++.|...|.+|+++++++.+.....    ..++.+.        .++ +++.++|+||.+
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~----~~G~~v~--------~le-eal~~aDVVIta  257 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAA----MDGFRVM--------TME-EAAKIGDIFITA  257 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH----hcCCEeC--------CHH-HHHhcCCEEEEC
Confidence            35788999999 599999999999999999999999886543322    2233322        123 456789999987


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      .|.
T Consensus       258 TG~  260 (406)
T TIGR00936       258 TGN  260 (406)
T ss_pred             CCC
Confidence            753

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.20  E-value=0.018  Score=45.54  Aligned_cols=58  Identities=21%  Similarity=0.128  Sum_probs=46.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++|+|.|.+.-+|+.++..|.++|+.|.+..++..                         +++ +..+.+|+||..
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------------------~l~-~~v~~ADIVvsA   78 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------------------QLQ-SKVHDADVVVVG   78 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------------------CHH-HHHhhCCEEEEe
Confidence            678899999999999999999999999999998875421                         344 456677888877


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .|..
T Consensus        79 tg~~   82 (140)
T cd05212          79 SPKP   82 (140)
T ss_pred             cCCC
Confidence            7653

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.20  E-value=0.02  Score=51.90  Aligned_cols=71  Identities=20%  Similarity=0.146  Sum_probs=51.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..+..+|++.|.| .|.||+++++.|..-|.+|...+|++.+.. ..    ..+..++       + ++ ++++.+|+|+
T Consensus       141 ~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~-~~----~~~~~y~-------~-l~-ell~~sDii~  205 (324)
T COG1052         141 GFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEA-EK----ELGARYV-------D-LD-ELLAESDIIS  205 (324)
T ss_pred             ccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHH-Hh----hcCceec-------c-HH-HHHHhCCEEE
Confidence            3467899999999 799999999999988899999999875211 11    1112221       1 56 7888999988


Q ss_pred             EcCCCC
Q 019935          157 CCTGTT  162 (333)
Q Consensus       157 ~~a~~~  162 (333)
                      .+....
T Consensus       206 l~~Plt  211 (324)
T COG1052         206 LHCPLT  211 (324)
T ss_pred             EeCCCC
Confidence            877553

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.18  E-value=0.073  Score=47.90  Aligned_cols=64  Identities=9%  Similarity=0.012  Sum_probs=46.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC---CcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG---VTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~---~d~vi~~a~  160 (333)
                      +|.|.| .|.+|..+++.|++.|++|++++|++++.+.+..    .++..       .++.+ ++++.   +|+||.+..
T Consensus         2 ~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~----~g~~~-------~~s~~-~~~~~~~~advVi~~vp   68 (299)
T PRK12490          2 KLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK----LGITA-------RHSLE-ELVSKLEAPRTIWVMVP   68 (299)
T ss_pred             EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----CCCee-------cCCHH-HHHHhCCCCCEEEEEec
Confidence            688888 7999999999999999999999999887766542    12221       12333 34443   688888764

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.17  E-value=0.017  Score=52.48  Aligned_cols=65  Identities=14%  Similarity=0.065  Sum_probs=50.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.++++.|.| .|.||+.+++.|...|.+|++++|....          ...        +..+++ ++++.+|+|+.
T Consensus       144 ~~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~----------~~~--------~~~~l~-ell~~sDiv~l  203 (317)
T PRK06487        144 VELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRP----------ARP--------DRLPLD-ELLPQVDALTL  203 (317)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCc----------ccc--------cccCHH-HHHHhCCEEEE
Confidence            357889999999 6999999999999999999999875311          001        123577 88899999998


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +....
T Consensus       204 ~lPlt  208 (317)
T PRK06487        204 HCPLT  208 (317)
T ss_pred             CCCCC
Confidence            88643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.17  E-value=0.0055  Score=47.47  Aligned_cols=72  Identities=19%  Similarity=0.214  Sum_probs=42.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHh-CCCeEEE-EEcCcchhhh--hhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLS-RNIKSRL-LLRDPEKATT--LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~-~~R~~~~~~~--~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|+|.|++|.+|+.+++.+.+ .|+++.+ ++|+++....  ....   .+..  ...+.-.++++ ++++.+|+||.+
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~---~~~~--~~~~~v~~~l~-~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGEL---AGIG--PLGVPVTDDLE-ELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHH---CTSS--T-SSBEBS-HH-HHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhh---hCcC--CcccccchhHH-HhcccCCEEEEc
Confidence            4799999999999999999999 5888666 5666522211  0000   0000  01111124566 677779999998


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus        75 T~   76 (124)
T PF01113_consen   75 TN   76 (124)
T ss_dssp             S-
T ss_pred             CC
Confidence            73

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.17  E-value=0.015  Score=51.74  Aligned_cols=66  Identities=15%  Similarity=0.084  Sum_probs=47.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|.|.| .|.+|..++..|.++|++|++++|+++..+.....    +..    |.  ..... +.+.++|+||.+...
T Consensus         2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~----g~~----~~--~~~~~-~~~~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER----GLV----DE--ASTDL-SLLKDCDLVILALPI   67 (279)
T ss_pred             eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC----CCc----cc--ccCCH-hHhcCCCEEEEcCCH
Confidence            689998 79999999999999999999999998776655421    110    10  11111 235679999998753

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.15  E-value=0.018  Score=51.97  Aligned_cols=70  Identities=16%  Similarity=0.115  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +.++|.|.| .|.+|..++..|.+.|+  +|++++|+++..+.....    ++..   ..  ..+.. +.++++|+||.+
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~----g~~~---~~--~~~~~-~~~~~aDvViia   73 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL----GLGD---RV--TTSAA-EAVKGADLVILC   73 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC----CCCc---ee--cCCHH-HHhcCCCEEEEC
Confidence            346899998 79999999999999984  899999998766554321    1110   01  11234 456789999999


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      ...
T Consensus        74 vp~   76 (307)
T PRK07502         74 VPV   76 (307)
T ss_pred             CCH
Confidence            864

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.14  E-value=0.021  Score=52.66  Aligned_cols=97  Identities=21%  Similarity=0.244  Sum_probs=60.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC---cchhhhhhccCCCCceEEEEccCCCcCCCch-hhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDP-AIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~-~~~~~~d~vi  156 (333)
                      .+.+|+|+|+ |.+|...++.+...|++|++++|+   +++.+...    .-++..+  |..+. .+.+ ....++|+||
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~----~~Ga~~v--~~~~~-~~~~~~~~~~~d~vi  243 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE----ELGATYV--NSSKT-PVAEVKLVGEFDLII  243 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH----HcCCEEe--cCCcc-chhhhhhcCCCCEEE
Confidence            5678999985 999999998888889999999983   44444332    2233332  33332 1210 1234789999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      .+.|..                  ......++.++.+ ++++.++...
T Consensus       244 d~~g~~------------------~~~~~~~~~l~~~-G~~v~~G~~~  272 (355)
T cd08230         244 EATGVP------------------PLAFEALPALAPN-GVVILFGVPG  272 (355)
T ss_pred             ECcCCH------------------HHHHHHHHHccCC-cEEEEEecCC
Confidence            999742                  1123344555543 4788776553

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.13  E-value=0.0066  Score=54.27  Aligned_cols=38  Identities=21%  Similarity=0.220  Sum_probs=34.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~  121 (333)
                      ++|.|.|+ |.+|+.++..|+..|++|++++++++..+.
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            58999996 999999999999999999999999877654

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.13  E-value=0.0099  Score=55.29  Aligned_cols=67  Identities=19%  Similarity=0.272  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      +++|+|.|+ |.+|+.++..+.+.|++|++++.+++......    .  -..+.+|..|.+.+. ++.+.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~----a--d~~~~~~~~D~~~l~-~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV----A--DEVIVADYDDVAALR-ELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh----C--ceEEecCCCCHHHHH-HHHhcCCEEE
Confidence            468999997 89999999999999999999998764422111    1  134567888988888 7888899874

>PLN02858 fructose-bisphosphate aldolase

Probab=96.12  E-value=0.039  Score=59.55  Aligned_cols=69  Identities=13%  Similarity=0.030  Sum_probs=53.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +.+.++|.+.| .|.+|.++++.|++.|++|++++|++++.+.+..    .++..       .++.. ++.+.+|+||-+
T Consensus       321 ~~~~~~IGfIG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~----~Ga~~-------~~s~~-e~~~~aDvVi~~  387 (1378)
T PLN02858        321 AKPVKRIGFIG-LGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFEN----AGGLA-------GNSPA-EVAKDVDVLVIM  387 (1378)
T ss_pred             ccCCCeEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCee-------cCCHH-HHHhcCCEEEEe
Confidence            34557899997 7999999999999999999999999888776653    22221       12344 567789999988


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus       388 V~  389 (1378)
T PLN02858        388 VA  389 (1378)
T ss_pred             cC
Confidence            74

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.12  E-value=0.085  Score=46.75  Aligned_cols=70  Identities=17%  Similarity=0.240  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC--CCeEE-EEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSR-LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~-~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +.++|.|.| .|.||+.+++.|.+.  ++++. +.+|++++.+.+....   +.      ..-.++++ +++.++|+||-
T Consensus         5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~---g~------~~~~~~~e-ell~~~D~Vvi   73 (271)
T PRK13302          5 PELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL---RR------PPPVVPLD-QLATHADIVVE   73 (271)
T ss_pred             CeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc---CC------CcccCCHH-HHhcCCCEEEE
Confidence            346899999 699999999999873  78876 4677777665554321   10      00123455 55677999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +++.
T Consensus        74 ~tp~   77 (271)
T PRK13302         74 AAPA   77 (271)
T ss_pred             CCCc
Confidence            9864

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.11  E-value=0.016  Score=49.84  Aligned_cols=72  Identities=13%  Similarity=0.206  Sum_probs=49.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcC----cchh-------hhhhccCCCCceEEEEccCCCcCCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRD----PEKA-------TTLFGKQDEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~----~~~~-------~~~~~~~~~~~~~~v~~D~~d~~~~  144 (333)
                      ++.+++|+|.|+ |..|+.++..|.+.|.   +|++++|+    .++.       +.+.... ..      .+. + .++
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~-~~------~~~-~-~~l   91 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKET-NP------EKT-G-GTL   91 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHh-cc------Ccc-c-CCH
Confidence            456689999996 9999999999999995   59999998    3332       1121110 00      011 1 245


Q ss_pred             chhhhcCCcEEEEcCCC
Q 019935          145 DPAIFEGVTHVICCTGT  161 (333)
Q Consensus       145 ~~~~~~~~d~vi~~a~~  161 (333)
                      . +.++++|+||++.+.
T Consensus        92 ~-~~l~~~dvlIgaT~~  107 (226)
T cd05311          92 K-EALKGADVFIGVSRP  107 (226)
T ss_pred             H-HHHhcCCEEEeCCCC
Confidence            4 566789999999873

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.10  E-value=0.047  Score=49.51  Aligned_cols=99  Identities=23%  Similarity=0.210  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh-cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~-~~~d~vi  156 (333)
                      .+.+++|.|++|.+|..+++.+...|.+|+++++++++.+.+...    ++..+ .|..+. .+.+   ... +++|.|+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~~v-~~~~~~-~~~~~~~~~~~~~vd~v~  212 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSL----GCDRP-INYKTE-DLGEVLKKEYPKGVDVVY  212 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHc----CCceE-EeCCCc-cHHHHHHHhcCCCCeEEE
Confidence            467899999999999999999888999999999887766554321    12111 122221 1210   111 3689999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      ++.|.                   ......++.++. .+++|.+++...
T Consensus       213 ~~~g~-------------------~~~~~~~~~l~~-~g~~v~~g~~~~  241 (329)
T cd08250         213 ESVGG-------------------EMFDTCVDNLAL-KGRLIVIGFISG  241 (329)
T ss_pred             ECCcH-------------------HHHHHHHHHhcc-CCeEEEEecccC
Confidence            98763                   123344455543 458998887654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.10  E-value=0.019  Score=50.87  Aligned_cols=68  Identities=19%  Similarity=0.224  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++++|.|+ |+.+++++..|++.|. +|++++|+.++.+.+.+...        .++.  +.+.   ...+|+|||+..
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~--------~~~~--~~~~---~~~~dlvINaTp  187 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG--------YEWR--PDLG---GIEADILVNVTP  187 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC--------Ccch--hhcc---cccCCEEEECCc
Confidence            468999995 9999999999999996 69999999988877754220        1111  1111   245899999986


Q ss_pred             CCC
Q 019935          161 TTA  163 (333)
Q Consensus       161 ~~~  163 (333)
                      ...
T Consensus       188 ~Gm  190 (272)
T PRK12550        188 IGM  190 (272)
T ss_pred             ccc
Confidence            654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.10  E-value=0.021  Score=51.42  Aligned_cols=40  Identities=23%  Similarity=0.299  Sum_probs=34.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ++|+|.|+ |.+|..++..|.+.|++|++++|+++..+.+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~   40 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALN   40 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence            37999996 99999999999999999999999876665554

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.09  E-value=0.011  Score=53.84  Aligned_cols=40  Identities=33%  Similarity=0.394  Sum_probs=35.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ++|.|.| .|-+|..++..|++.|++|++++|++++.+.+.
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~   44 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALA   44 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            5799998 599999999999999999999999887766554

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.08  E-value=0.047  Score=50.62  Aligned_cols=99  Identities=16%  Similarity=0.175  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCch---hhh-cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDP---AIF-EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~---~~~-~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++++.+...+.    ++.. ..|..+ .+.+.+   ++. .++|+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~----Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~  258 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKL----GATD-CVNPNDYDKPIQEVIVEITDGGVDY  258 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCCe-EEcccccchhHHHHHHHHhCCCCCE
Confidence            4679999985 9999999998888898 799998888776654321    2221 123332 111220   111 26999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      +|+++|..                  ......++.++.+.++++.++..
T Consensus       259 vid~~G~~------------------~~~~~~~~~~~~~~G~~v~~g~~  289 (368)
T TIGR02818       259 SFECIGNV------------------NVMRAALECCHKGWGESIIIGVA  289 (368)
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCCeEEEEecc
Confidence            99998742                  12344455555554688887754

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.06  E-value=0.048  Score=50.16  Aligned_cols=42  Identities=31%  Similarity=0.427  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      .+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~  207 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK  207 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4679999999 99999999999999999999999887766543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.04  E-value=0.036  Score=49.15  Aligned_cols=38  Identities=32%  Similarity=0.288  Sum_probs=34.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ++.+++|+|+|.++.+|+.++..|.++|++|+++.+..
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            57889999999999999999999999999999988753

>PLN02306 hydroxypyruvate reductase

Probab=96.03  E-value=0.03  Score=52.09  Aligned_cols=81  Identities=7%  Similarity=0.040  Sum_probs=51.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcchh-hhhhccCCCCceEEE---EccCCCcCCCchhhhcCC
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEKA-TTLFGKQDEETLQVC---KGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~v---~~D~~d~~~~~~~~~~~~  152 (333)
                      ..+.+++|.|.| .|.||+++++.|. ..|.+|+++++..... ....... +....-.   ..++....+++ +++..+
T Consensus       161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~L~-ell~~s  237 (386)
T PLN02306        161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAY-GQFLKANGEQPVTWKRASSME-EVLREA  237 (386)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhh-cccccccccccccccccCCHH-HHHhhC
Confidence            357889999999 6999999999986 7799999999875321 1100000 0000000   01122234677 889999


Q ss_pred             cEEEEcCCC
Q 019935          153 THVICCTGT  161 (333)
Q Consensus       153 d~vi~~a~~  161 (333)
                      |+|+..+..
T Consensus       238 DiV~lh~Pl  246 (386)
T PLN02306        238 DVISLHPVL  246 (386)
T ss_pred             CEEEEeCCC
Confidence            999887754

>PLN02740 Alcohol dehydrogenase-like

Probab=96.03  E-value=0.058  Score=50.31  Aligned_cols=99  Identities=19%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC-CCch---hhhc-CCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDP---AIFE-GVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~-~~~~---~~~~-~~d~  154 (333)
                      .+.+|||.|+ |.+|..+++.+...|. +|+++++++++.+...+.    ++.. ..|..+.+ .+.+   +... ++|+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~----Ga~~-~i~~~~~~~~~~~~v~~~~~~g~dv  271 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEM----GITD-FINPKDSDKPVHERIREMTGGGVDY  271 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHc----CCcE-EEecccccchHHHHHHHHhCCCCCE
Confidence            4679999995 9999999999988998 699999988776655421    2221 12333321 1221   2222 6999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ||.+.|..                  ......++.++.+-++++.++..
T Consensus       272 vid~~G~~------------------~~~~~a~~~~~~g~G~~v~~G~~  302 (381)
T PLN02740        272 SFECAGNV------------------EVLREAFLSTHDGWGLTVLLGIH  302 (381)
T ss_pred             EEECCCCh------------------HHHHHHHHhhhcCCCEEEEEccC
Confidence            99999842                  11233334444444678887753

>PRK06932 glycerate dehydrogenase; Provisional

Probab=96.03  E-value=0.023  Score=51.52  Aligned_cols=65  Identities=11%  Similarity=0.013  Sum_probs=49.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.++++.|.| .|.||+.+++.|...|.+|++++|....         .       .+. ...+++ +++..+|+|+.
T Consensus       143 ~~l~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~---------~-------~~~-~~~~l~-ell~~sDiv~l  203 (314)
T PRK06932        143 TDVRGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGAS---------V-------CRE-GYTPFE-EVLKQADIVTL  203 (314)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCccc---------c-------ccc-ccCCHH-HHHHhCCEEEE
Confidence            367889999999 6999999999999899999988764210         0       000 123577 88899999998


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       204 ~~Pl  207 (314)
T PRK06932        204 HCPL  207 (314)
T ss_pred             cCCC
Confidence            8854

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.02  E-value=0.01  Score=53.41  Aligned_cols=67  Identities=15%  Similarity=0.113  Sum_probs=47.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +|.|.| .|.+|..+++.|++.|++|++++|++++.+.+.+.    ++..    ..+.+++. +.+..+|+||.+..
T Consensus         2 ~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~----g~~~----~~s~~~~~-~~~~~~dvIi~~vp   68 (298)
T TIGR00872         2 QLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED----RTTG----VANLRELS-QRLSAPRVVWVMVP   68 (298)
T ss_pred             EEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc----CCcc----cCCHHHHH-hhcCCCCEEEEEcC
Confidence            689999 69999999999999999999999999887776532    1111    11222222 23455788877753

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.02  E-value=0.018  Score=51.97  Aligned_cols=75  Identities=17%  Similarity=0.156  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHh-CC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLS-RN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~-~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      +...++++|.| +|.+|+..++.|+. .+ .+|++++|++++.+.+.......++.+.      .++++ +++.++|+||
T Consensus       122 ~~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~------~~~~~-~av~~aDiVi  193 (304)
T PRK07340        122 PAPPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE------PLDGE-AIPEAVDLVV  193 (304)
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE------ECCHH-HHhhcCCEEE
Confidence            34567999999 59999999999976 45 5799999999888877654322122222      24455 6778999999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      ++...
T Consensus       194 taT~s  198 (304)
T PRK07340        194 TATTS  198 (304)
T ss_pred             EccCC
Confidence            98864

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.00  E-value=0.018  Score=50.26  Aligned_cols=100  Identities=22%  Similarity=0.166  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh----hcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~----~~~~d~v  155 (333)
                      ..+.+|+|+|+++ +|..+++.+...|.+|+++++++++.+.+...    +... ..|..+.+... ..    -.++|++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~-~~~~~~~~~~d~v  205 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKEL----GADH-VIDYKEEDLEE-ELRLTGGGGADVV  205 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHh----CCce-eccCCcCCHHH-HHHHhcCCCCCEE
Confidence            3467899999988 99999999999999999999987665544321    1111 12333322222 11    2468999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +++++..                  .....+++.++. .++++.++....
T Consensus       206 i~~~~~~------------------~~~~~~~~~l~~-~G~~v~~~~~~~  236 (271)
T cd05188         206 IDAVGGP------------------ETLAQALRLLRP-GGRIVVVGGTSG  236 (271)
T ss_pred             EECCCCH------------------HHHHHHHHhccc-CCEEEEEccCCC
Confidence            9998641                  123444555544 358888776654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	333
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		2e-13

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 43/238 (18%)
Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRR 168
           ++ L+R  +    + G+ D     V  GD  +   ++PA F+G+  ++  T  +A P  +
Sbjct: 33  AKGLVRSAQGKEKIGGEAD-----VFIGDITDADSINPA-FQGIDALVILT--SAVPKMK 84
Query: 169 --------------WDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW 213
                         ++    PE+VDW G +N + A   + +K IV+V S+G T  +  P 
Sbjct: 85  PGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-PL 143
Query: 214 SIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLM 273
           + +    +L +K+  E ++  SG P+TIIRAG L D                G  R +L+
Sbjct: 144 NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLD--------------KEGGVRELLV 189
Query: 274 GQGDKLIG----EVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELF 327
           G+ D+L+      V R  VAE CIQAL  E  + + +++ S + EG  +  + ++ LF
Sbjct: 190 GKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGS-KPEGTSTPTKDFKALF 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	333
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-57
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	7e-57
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-47
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-45
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-39
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-29
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	7e-25
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-19
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	9e-19
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-18
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-18
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	6e-18
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-17
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	4e-17
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-17
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-16
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	5e-16
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	6e-16
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-15
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-14
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	8e-14
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	7e-13
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-10
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-09
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	7e-09
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-06
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	9e-06
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-05

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  184 bits (468), Expect = 5e-57
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 33/270 (12%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKG 136
           +++   VLV G SG  GQ+V   L   +    ++ L+R  +    + G+       V  G
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-----ADVFIG 55

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTA------------FPSRRWDGDNTPEKVDWEGVR 184
           D  +   ++PA F+G+  ++  T                 P   ++    PE+VDW G +
Sbjct: 56  DITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 185 NLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIR 243
           N + A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TIIR
Sbjct: 115 NQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

Query: 244 AGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG 303
           AG L D      +L         +               V R  VAE CIQAL  E  + 
Sbjct: 174 AGGLLDKEGGVRELLVGKDDELLQTD----------TKTVPRADVAEVCIQALLFEEAKN 223

Query: 304 EIYEINSVEGEGPGSDPQKWRELFKAAKAK 333
           + +++ S   EG  +  + ++ LF    ++
Sbjct: 224 KAFDLGSKP-EGTSTPTKDFKALFSQVTSR 252

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  183 bits (466), Expect = 7e-57
 Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 32/252 (12%)

Query: 70  PNSDSKVTPASSSKL-VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
            +  S         + VLV G +G V + +++ L ++  +   ++R+ E+   L  +   
Sbjct: 8   HHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGAS 67

Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
           +   +   +    +D   A F  +  V+   G     S    G +    +D  G    + 
Sbjct: 68  D---IVVANL--EEDFSHA-FASIDAVVFAAG-----SGPHTGADKTILIDLWGAIKTIQ 116

Query: 188 SALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRL 247
            A    +KR ++VSSVG    ++ P   MN+   L  K++ +D +++S L +TI+R G L
Sbjct: 117 EAEKRGIKRFIMVSSVGTVDPDQGP---MNMRHYLVAKRLADDELKRSSLDYTIVRPGPL 173

Query: 248 TDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYE 307
           ++   T               +  +     ++   ++R  VA+   + +D + T G+ +E
Sbjct: 174 SNEESTG--------------KVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFE 219

Query: 308 INSVEGEGPGSD 319
           +  + G+ P + 
Sbjct: 220 V--LNGDTPIAK 229

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  157 bits (399), Expect = 3e-47
 Identities = 40/221 (18%), Positives = 76/221 (34%), Gaps = 30/221 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G   +A  +    +  +L+RD  +  +           V  GD     D+
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADV 61

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
           D     G   VI   GT          D +P  V  EG RN+V+A+ +  + ++V  +S 
Sbjct: 62  DKT-VAGQDAVIVLLGT--------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA 263
            +    +       L  V          +++SGL +  +    + D P T          
Sbjct: 113 FL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG--------- 161

Query: 264 TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGE 304
                   +   G      +S+  +    ++ L  +  +G 
Sbjct: 162 -----AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGH 197

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  152 bits (386), Expect = 4e-45
 Identities = 39/239 (16%), Positives = 89/239 (37%), Gaps = 39/239 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD-TRNPKD 143
           + + G +G VG+ ++ SL + + +     R  E+            ++    D    P++
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN------VKAVHFDVDWTPEE 56

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
           +      G+  +I  +G+            +  KVD  G   L+ A   + +KR +L+S+
Sbjct: 57  MAKQ-LHGMDAIINVSGSGG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106

Query: 203 VGVTK-FNELPWSIMNLFGVLKYKKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDLNTL 260
           +   +    +      L      K   + ++ K + L +TII+ G LT+   T       
Sbjct: 107 IFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEATGL----- 161

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSD 319
                       +   D++    +   VA+   + +  + + G++  +    G+    +
Sbjct: 162 ------------IDINDEVSASNTIGDVADTIKELVMTDHSIGKVISM--HNGKTAIKE 206

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  138 bits (349), Expect = 2e-39
 Identities = 57/243 (23%), Positives = 87/243 (35%), Gaps = 43/243 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           VL+ G  G + + V+  L  +  IK  L  R P K    +        Q+  GD  N   
Sbjct: 26  VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN----SQIIMGDVLNHAA 81

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
           L  A  +G   V                    E +D +    + +     +KR++ V S+
Sbjct: 82  LKQA-MQGQDIVYANLT--------------GEDLDIQANSVIAAMKACDVKRLIFVLSL 126

Query: 204 GVTK---FNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           G+        + W+   +   LK  +   D ++ SGL +TI+R   LTD     Y+L + 
Sbjct: 127 GIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSR 186

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL-DIEFTEGEIYEINSVEGEGPGSD 319
            +   G                VSR  VA      +   E   GE   IN      PG+D
Sbjct: 187 NEPFKG--------------TIVSRKSVAALITDIIDKPEKHIGENIGIN-----QPGTD 227

Query: 320 PQK 322
             K
Sbjct: 228 GDK 230

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score =  112 bits (280), Expect = 1e-29
 Identities = 45/243 (18%), Positives = 89/243 (36%), Gaps = 44/243 (18%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           + + G +G + Q + A+LL+  ++   L  R  +         D E + V +G  +NP  
Sbjct: 8   ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGX 66

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202
           L+ A       V      +                    + ++V AL   +++R++ VS 
Sbjct: 67  LEQA-VTNAEVVFVGAMESG-----------------SDMASIVKALSRXNIRRVIGVSM 108

Query: 203 VGVTKFNELP-----WSIMNLFG-VLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD 256
            G+    E P     W+  NL    ++ ++   + +++S L +TI+R   L + P     
Sbjct: 109 AGL--SGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDP----- 161

Query: 257 LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGP 316
                         ++         +VSR  V +A    L     +   +   S+    P
Sbjct: 162 --------EXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAA--DETPFHRTSIGVGEP 211

Query: 317 GSD 319
           G+ 
Sbjct: 212 GTH 214

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 99.4 bits (248), Expect = 7e-25
 Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 33/243 (13%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
              K +++ G SG VG  ++   L+R  +   ++R PEK      K + E L+V K D  
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----KIENEHLKVKKADVS 56

Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIV 198
           +  ++     +G   VI               +        +    ++  +  + + R +
Sbjct: 57  SLDEVCEVC-KGADAVISAFNPGW-------NNPDIYDETIKVYLTIIDGVKKAGVNRFL 108

Query: 199 LVSSVGV------TKFNELPWSIMNLFGVLKY--KKMGEDFVQKSGLPFTIIR-AGRLTD 249
           +V   G        +  +      N+   +K   +      +++  + +     A  +  
Sbjct: 109 MVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRP 168

Query: 250 GPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN 309
           G  T        +   G+   ++   G+     +S    A A I  L+      E + I 
Sbjct: 169 GVRTG-------RYRLGKDDMIVDIVGN---SHISVEDYAAAMIDELEHPKHHQERFTIG 218

Query: 310 SVE 312
            +E
Sbjct: 219 YLE 221

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 84.9 bits (210), Expect = 5e-19
 Identities = 45/263 (17%), Positives = 91/263 (34%), Gaps = 39/263 (14%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----VC 134
            S   +L+ G +G +G+ V  + L     + LL+R+   ++     Q  E+ +     + 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSS 193
            G   +   L  A  + V  VI   G+                +  E   N++ A     
Sbjct: 62  HGSIDDHASLVEA-VKNVDVVISTVGS----------------LQIESQVNIIKAIKEVG 104

Query: 194 LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYT 253
             +    S  G    N    ++     V + K      ++  G+P+T + +       + 
Sbjct: 105 TVKRFFPSEFGNDVDN--VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSS-----NCFA 157

Query: 254 SYDLNTLLKATAG---ERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS 310
            Y L +L +A        + V++G G+  +  V    +    I+A+D   T  +   +  
Sbjct: 158 GYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL-- 215

Query: 311 VEGEGPGSDPQKWRELFKAAKAK 333
                  ++     EL    + K
Sbjct: 216 ----RLPANTLSLNELVALWEKK 234

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 84.2 bits (208), Expect = 9e-19
 Identities = 41/263 (15%), Positives = 87/263 (33%), Gaps = 40/263 (15%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD------EETLQVC 134
           +   +L+ G +G +G+ +V + +     +  L+R    A     K++         + + 
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSS 193
           +GD  + + L  A  + V  VIC  G                 +  E    ++ +   + 
Sbjct: 61  EGDINDHETLVKA-IKQVDIVICAAGR----------------LLIEDQVKIIKAIKEAG 103

Query: 194 LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYT 253
             +    S  G+          +      + K      ++  G+P+T +         +T
Sbjct: 104 NVKKFFPSEFGLDVDRHDAVEPVRQV--FEEKASIRRVIEAEGVPYTYLCC-----HAFT 156

Query: 254 SYDLNTLLKATAG---ERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS 310
            Y L  L +  A      + V++G G+     V+   V    I+A +   T  +   I  
Sbjct: 157 GYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHI-- 214

Query: 311 VEGEGPGSDPQKWRELFKAAKAK 333
                   +     E+    + K
Sbjct: 215 ----RLPKNYLTQNEVIALWEKK 233

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 83.1 bits (206), Expect = 2e-18
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 33/226 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS-RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           +++ G +G +G  +    ++ +I    + +R+ EK    +       + V + D  N + 
Sbjct: 3   IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG----KVSVRQLDYFNQES 58

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
           +  A F+G+  V+          +R              V NLV A   S +  I+ +  
Sbjct: 59  MVEA-FKGMDTVVFIPSIIHPSFKR-----------IPEVENLVYAAKQSGVAHIIFIGY 106

Query: 203 VGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK 262
                 N    S         Y       +  SG+ +T +R        Y       L  
Sbjct: 107 YADQHNNPFHMS--------PYFGYASRLLSTSGIDYTYVR-----MAMYMDPLKPYL-- 151

Query: 263 ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
                   ++   GD  I  ++R  +A   I  +    T G+ Y +
Sbjct: 152 PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLL 197

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 81.6 bits (202), Expect = 6e-18
 Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 34/227 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + V G +G +G LV+  LL +   S    ++R+ EKA+TL     ++ ++V  GD   P+
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPE 58

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
            L  A F GV+ ++  +G     +                  N+V A   + +K I    
Sbjct: 59  SLQKA-FAGVSKLLFISGPHYDNTLL-----------IVQHANVVKAARDAGVKHIAYTG 106

Query: 202 SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL 261
                +         ++  +       E  ++ + +P+T +R     +  YT + +N  L
Sbjct: 107 YAFAEE---------SIIPLAHVHLATEYAIRTTNIPYTFLR-----NALYTDFFVNEGL 152

Query: 262 KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
           +A + E  A++   G  ++  V+R  +A A    L  E  E + Y +
Sbjct: 153 RA-STESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNL 198

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 81.9 bits (202), Expect = 6e-18
 Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 26/237 (10%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL----QVCK 135
                VL+ GG+G +G+ +V + +S    + +L R    +     +          ++ +
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLK 195
               + + L  A  + V  VI                             LV A+  +  
Sbjct: 62  ASLDDHQRLVDA-LKQVDVVISALAG------------GVLSHHILEQLKLVEAIKEAGN 108

Query: 196 RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY 255
               + S      + +  ++         K+     ++ + +P+T + +       +  Y
Sbjct: 109 IKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS-----NMFAGY 163

Query: 256 DLNTLLKATAG----ERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
              +L +          + ++ G G+     V    V    I+++D   T  +   I
Sbjct: 164 FAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI 220

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 78.5 bits (193), Expect = 3e-17
 Identities = 30/236 (12%), Positives = 74/236 (31%), Gaps = 40/236 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G  ++    +R  +   ++R+  K T        + + + + D  +    
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----HKDINILQKDIFDLTLS 57

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203
           D +       V+   G +              +     + +L+S L  +   R+++V   
Sbjct: 58  DLS---DQNVVVDAYGISP----------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104

Query: 204 GVTKFNE----------LPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIR-AGRLTDGPY 252
              + +E          L  +        + K++      ++   +T I  +     G  
Sbjct: 105 ASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGER 164

Query: 253 TSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
           T            G+   +    G+  I   S    A A +  ++      E + +
Sbjct: 165 TG-------DYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHLNEHFTV 210

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 43/236 (18%), Positives = 73/236 (30%), Gaps = 38/236 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + V G +G  G  +VA    R  +   ++RDP+KA    G              + P  L
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-------ATVATLVKEPLVL 55

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A  + V  V+          R          +  +   +LVS L  S    + ++ S 
Sbjct: 56  TEADLDSVDAVVDALSVPWGSGR--------GYLHLDFATHLVSLLRNSDTLAVFILGSA 107

Query: 204 GVTK----------FNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTD-GPY 252
            +            F E   S     G L      +     + + +  I        GP 
Sbjct: 108 SLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPA 167

Query: 253 TSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
           TSY         AG+   ++   G   I   +   +A A +  L+      +   +
Sbjct: 168 TSY--------VAGKDTLLVGEDGQSHI---TTGNMALAILDQLEHPTAIRDRIVV 212

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 79.6 bits (197), Expect = 4e-17
 Identities = 41/266 (15%), Positives = 76/266 (28%), Gaps = 42/266 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
             V G +G +G     ++ +      L+ R   +   L   + E        +  +   L
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE----CRVAEMLDHAGL 71

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
           + A   G+  VI   G      RRW  +                + L + + RI+ V S 
Sbjct: 72  ERA-LRGLDGVIFSAGYYPSRPRRWQEE---VASALGQTNPFYAACLQARVPRILYVGSA 127

Query: 204 GV-------TKFNELPWSIMNLFGVLKY---KKMGEDFV---QKSGLPFTIIRAGRLTDG 250
                       +E  +      G   Y   K   ++      ++GLP  I   G     
Sbjct: 128 YAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPG----M 183

Query: 251 PYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV----VAEACIQALDIEFTEGEIY 306
                D+      T     A+  G+    +     ++         + AL+     GE Y
Sbjct: 184 VLGELDIGPT---TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG-RIGERY 239

Query: 307 EINSVEGEGPGSDPQKWRELFKAAKA 332
            +             +  +L +    
Sbjct: 240 LL--------TGHNLEMADLTRRIAE 257

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 76.8 bits (189), Expect = 2e-16
 Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 21/171 (12%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
            +K V + G SG  G++++  +L + + S++ L  R          K     +     D 
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDF 72

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRI 197
               D   A F+G     CC GTT    R   G     +VD + V      A     K  
Sbjct: 73  EKLDDYASA-FQGHDVGFCCLGTT----RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHF 127

Query: 198 VLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP-FTIIRAGRL 247
            L+SS G  K +   +        L+ K   E  V++     +++ R G L
Sbjct: 128 NLLSSKGADKSSNFLY--------LQVKGEVEAKVEELKFDRYSVFRPGVL 170

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 76.5 bits (188), Expect = 5e-16
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 77  TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKG 136
                   +L+ GG+G +G  +V   L     + +  R     TTL  +       + KG
Sbjct: 6   EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG 65

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKR 196
           +    + L     + V  VI          +                + L +   +   +
Sbjct: 66  ELDEHEKLVEL-MKKVDVVISALAFPQILDQ---------------FKILEAIKVAGNIK 109

Query: 197 IVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD 256
             L S  GV +              ++ K+M    ++++ +P+T + A       + SY 
Sbjct: 110 RFLPSDFGVEEDRINALPPFEAL--IERKRMIRRAIEEANIPYTYVSA-----NCFASYF 162

Query: 257 LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGP 316
           +N LL+    +    + G G+          +    I+          +          P
Sbjct: 163 INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIY------RP 216

Query: 317 GSDPQKWRELFKAAKAK 333
            ++     EL    + K
Sbjct: 217 STNIITQLELISRWEKK 233

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 75.8 bits (187), Expect = 6e-16
 Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 37/227 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + + G +G +G  V+ SL+     S    ++R+P KA  L      + + V + D  +  
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEA 57

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
            L  A  +GV  ++  + +         G   P+       RN+++A  ++ +K I   S
Sbjct: 58  ALTSA-LQGVEKLLLISSSE-------VGQRAPQ------HRNVINAAKAAGVKFIAYTS 103

Query: 202 SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL 261
            +             +  G+       E  +  SG+ +T++R     +G Y+   L +  
Sbjct: 104 LLHADT---------SPLGLADEHIETEKMLADSGIVYTLLR-----NGWYSENYLASA- 148

Query: 262 KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
              A E    +   GD  I   +R   A A  + +     EG++YE+
Sbjct: 149 -PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYEL 194

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 41/234 (17%), Positives = 80/234 (34%), Gaps = 38/234 (16%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
           S+ K VL+AG +G  G+ ++  +LS    +++             ++             
Sbjct: 3   STPKRVLLAGATGLTGEHLLDRILSEPTLAKV---------IAPARKALAEHPRLDNPVG 53

Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIV 198
              +L P +   +    CC GTT    +    +     VD++    +   AL    +  +
Sbjct: 54  PLAELLPQLDGSIDTAFCCLGTTI---KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYL 110

Query: 199 LVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP-FTIIRAGRLTDGPYTSYDL 257
           +VS++G    + + +         + K   E  +Q+ G P  TI R   L  GP   +  
Sbjct: 111 VVSALGADAKSSIFY--------NRVKGELEQALQEQGWPQLTIARPSLLF-GPREEF-- 159

Query: 258 NTLLKATAGERRAVLMGQGDKLIGEVSRIV----VAEACIQALDIEFTEGEIYE 307
                    E  A  +    +++      +    +A A  +    E       E
Sbjct: 160 ------RLAEILAAPIA---RILPGKYHGIEACDLARALWRLALEEGKGVRFVE 204

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 72.7 bits (178), Expect = 9e-15
 Identities = 44/264 (16%), Positives = 91/264 (34%), Gaps = 39/264 (14%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----V 133
            S  + +++ GG+G +G+ +V + LS +  + +  R     +T    Q  E  +     +
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60

Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPS 192
            +G+    + +     + V  VI         S+                 ++++A   +
Sbjct: 61  IEGEMEEHEKMVSV-LKQVDIVISALPFPMISSQ----------------IHIINAIKAA 103

Query: 193 SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPY 252
              +  L S  G  +    P        VL+ K++    ++ + LP+T + A       +
Sbjct: 104 GNIKRFLPSDFGCEEDRIKPLPPFE--SVLEKKRIIRRAIEAAALPYTYVSA-----NCF 156

Query: 253 TSYDLNTLLKATA---GERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN 309
            +Y +N LL  +         V+ G G+          +A+  I+          I    
Sbjct: 157 GAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIY- 215

Query: 310 SVEGEGPGSDPQKWRELFKAAKAK 333
                 P  +     EL    +AK
Sbjct: 216 -----RPPKNIISQNELISLWEAK 234

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 70.9 bits (174), Expect = 3e-14
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 22/170 (12%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE--KATTLFGKQDEETLQVCKG 136
              KLV+V GG+G  G  V  +LL     K R++ R+P    A  L  +  E    V +G
Sbjct: 3   VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE----VVQG 58

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
           D  +   ++ A   G       T         W+  +  ++V     + L   A    L 
Sbjct: 59  DQDDQVIMELA-LNGAYATFIVTNY-------WESCSQEQEVKQ--GKLLADLARRLGLH 108

Query: 196 RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAG 245
            +V      + K      +          K   E++ +  G+P T +R  
Sbjct: 109 YVVYSGLENIKKLTAGRLAA----AHFDGKGEVEEYFRDIGVPMTSVRLP 154

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 70.4 bits (172), Expect = 8e-14
 Identities = 43/263 (16%), Positives = 88/263 (33%), Gaps = 30/263 (11%)

Query: 76  VTPASSSK-LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---ETL 131
           V+P  S K  VL+AG +G +GQ V  + L  +  + +L R   ++ +          +  
Sbjct: 3   VSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA 62

Query: 132 QVCKGDTRNPKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190
            +  G     + ++  +    +  V+   G  +   +                  LV A+
Sbjct: 63  IIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQ----------------IALVKAM 106

Query: 191 PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDG 250
            +       + S      N        L  + + K+     V++SG+PFT I    +   
Sbjct: 107 KAVGTIKRFLPSEFGHDVNRADPVEPGL-NMYREKRRVRQLVEESGIPFTYICCNSIASW 165

Query: 251 PYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS 310
           PY +    + +          + G G+     V+   + +  ++ +D   T  +      
Sbjct: 166 PYYNNIHPSEVLPPT--DFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHF-- 221

Query: 311 VEGEGPGSDPQKWRELFKAAKAK 333
                P  +     EL    + K
Sbjct: 222 ----RPSCNCLNINELASVWEKK 240

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 67.5 bits (165), Expect = 7e-13
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 25/171 (14%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKG 136
           A   K + V G +G  G  ++    +     R  +   +   A  L    +     + +G
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT---LFQG 58

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
              N   L   +FEG       T T+        G            ++L  +A  +   
Sbjct: 59  PLLNNVPLMDTLFEGAHLAFINT-TSQAGDEIAIG------------KDLADAAKRAGTI 105

Query: 196 RIVLVSSV-GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAG 245
           +  + SS+   + +   PW  + ++     K   E++V++ GLP T + AG
Sbjct: 106 QHYIYSSMPDHSLYG--PWPAVPMW---APKFTVENYVRQLGLPSTFVYAG 151

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 50/260 (19%), Positives = 89/260 (34%), Gaps = 43/260 (16%)

Query: 77  TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQV 133
                 K   V GG+G V  L+V  LL +       +RDP+       L   Q+   L++
Sbjct: 4   QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63

Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSAL 190
            + D  +    +  I  G   V       A P      D   + +    +GV N + +  
Sbjct: 64  FRADLTDELSFEAPI-AGCDFVFH----VATPVHFASEDPENDMIKPAIQGVVNVMKACT 118

Query: 191 PS-SLKRIVLVSSVGVTKFNELP----------WSIMNLFGVLK-----Y---KKMGE-- 229
            + S+KR++L SS      N+L           W+ +      K     Y   K + E  
Sbjct: 119 RAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKA 178

Query: 230 --DFVQKSGLPFTIIRAGRLTDGPYTSYDLNT----LLKATAGERRAVLMGQGDKLIGEV 283
              F +++ +    +    L  G   + D+ +     +    G    +   +G +++   
Sbjct: 179 AWKFAEENNIDLITVIPT-LMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGS 237

Query: 284 SRIV----VAEACIQALDIE 299
             I     V  A I   + E
Sbjct: 238 VSIAHVEDVCRAHIFVAEKE 257

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 52/211 (24%), Positives = 78/211 (36%), Gaps = 38/211 (18%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA------TTLFGKQDEETLQ 132
            S S+ V V G SG +G  +V  LL R    R  +RDP           L     E  L 
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPK--AETHLT 59

Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSA 189
           + K D  +    D AI +G T V       A P      D   E +    EG+   + S 
Sbjct: 60  LWKADLADEGSFDEAI-KGCTGVFH----VATPMDFESKDPENEVIKPTIEGMLGIMKSC 114

Query: 190 LPS-SLKRIVLVSSVG--------VTKFNELPWSIMNLFGVLK-----Y---KKMGE--- 229
             + +++R+V  SS G        +  ++E  WS M      K     Y   K + E   
Sbjct: 115 AAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAA 174

Query: 230 -DFVQKSGLPFTIIRAGRLTDGPYTSYDLNT 259
             + +++ + F  I    L  GP+    +  
Sbjct: 175 WKYAKENNIDFITIIPT-LVVGPFIMSSMPP 204

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 55.9 bits (134), Expect = 5e-09
 Identities = 47/283 (16%), Positives = 92/283 (32%), Gaps = 49/283 (17%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-----LLRDPEKATTLFGKQDEETLQVCKG 136
           S + L+ G +G +G  +   L   +          + R    A       ++  +   + 
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQC 55

Query: 137 DTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---P 191
           D  +P D    +     VTHV   T       +     N+         RN++ A+    
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSK------MFRNVLDAVIPNC 109

Query: 192 SSLKRIVLVSSV----------GVTKFNELPWSIMN------LFGVLKYKKMGEDFVQKS 235
            +LK I L +            G  + ++ P++          F       M E+  +K 
Sbjct: 110 PNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKE 169

Query: 236 GLPFTIIRAGRLT-DGPYTSYDLNTLLKATAGERRAV--------LMGQGDKLIGEVSRI 286
           GL +++ R G +    PY+  +L   L   A   +               D         
Sbjct: 170 GLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDAD 229

Query: 287 VVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKA 329
           ++AE  I A    + + E + +++ +          W+ L + 
Sbjct: 230 LIAEHHIWAAVDPYAKNEAFNVSNGD---VFKWKHFWKVLAEQ 269

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 50/247 (20%), Positives = 84/247 (34%), Gaps = 43/247 (17%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIK----SRLLLRDPEKATTLFG-KQDEETLQVCKGD 137
             V V GG+G +G  ++ SLL          R         + L       E L     D
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61

Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSALPS-S 193
             NP     AI EG   +      TA P      +          +G    L + + S +
Sbjct: 62  LSNPDSFAAAI-EGCVGIFH----TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 194 LKRIVLVSSVGVTKFNELP--------WSIMNLFGVLK-----Y---KKMGE----DFVQ 233
           +KR +  SS     FN           WS ++L   +K     Y   K + E    +F +
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176

Query: 234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV----VA 289
           ++G+    +       G +    L      +  +   +++G+ +++      +V    VA
Sbjct: 177 QNGIDVVTLILP-FIVGRFVCPKLPD----SIEKALVLVLGKKEQIGVTRFHMVHVDDVA 231

Query: 290 EACIQAL 296
            A I  L
Sbjct: 232 RAHIYLL 238

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 42/252 (16%), Positives = 91/252 (36%), Gaps = 36/252 (14%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           ++LV G SG +G  +V  L  +  K  ++  D         ++D   ++    D  N  +
Sbjct: 1   MILVTGSSGQIGTELVPYLAEKYGKKNVIASD-------IVQRDTGGIKFITLDVSNRDE 53

Query: 144 LDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRN-LVSALPSSLKRI 197
           +D A+    +  +          S +  G+  P    ++    G  N L +A    ++++
Sbjct: 54  IDRAVEKYSIDAIFHL---AGILSAK--GEKDPAL-AYKVNMNGTYNILEAAKQHRVEKV 107

Query: 198 VLVSSVGV-------TKFNEL-PWSIMNLFGVLKYK--KMGEDFVQKSGLPFTIIR---- 243
           V+ S++GV        K   +       +FGV K     +G+ + +K GL    +R    
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI 167

Query: 244 AGRLTD--GPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT 301
                +     T Y +     A   E +       ++ +  +      +A +   + +  
Sbjct: 168 ISYKAEPTAGTTDYAVEIFYYAVKRE-KYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226

Query: 302 EGEIYEINSVEG 313
           +  +    +V  
Sbjct: 227 KLVLRNGYNVTA 238

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 43/134 (32%), Gaps = 17/134 (12%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQ-VCK 135
               LVLV G +G V   VV  LL    K R   R   K       +  +     +    
Sbjct: 9   PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW---EGVRN-LVSAL- 190
            D       D  I +G   V       A         N  ++V      G  N L +A  
Sbjct: 69  EDMLKQGAYDEVI-KGAAGVAH----IASV---VSFSNKYDEVVTPAIGGTLNALRAAAA 120

Query: 191 PSSLKRIVLVSSVG 204
             S+KR VL SS  
Sbjct: 121 TPSVKRFVLTSSTV 134

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 16/122 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+AG  G +G  +   L ++  +   L R  +             +Q    D   P  L
Sbjct: 6   ILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
              +      ++ C       +  +  ++       EG+RN +SAL  + L+ +  VSS 
Sbjct: 57  ASIVHLRPEILVYC-----VAASEYSDEH-YRLSYVEGLRNTLSALEGAPLQHVFFVSST 110

Query: 204 GV 205
           GV
Sbjct: 111 GV 112

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 41/250 (16%), Positives = 73/250 (29%), Gaps = 49/250 (19%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS-----RLLLRD---PEKATTLFGKQDEETLQVCKG 136
           + + G +G VG+ +   L+           +  L D   PE      G      +     
Sbjct: 17  IAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-----VDARAA 71

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRNLVSAL-- 190
           D   P + +  +      +       A  S     +   +K  +     G R L  A+  
Sbjct: 72  DLSAPGEAEKLVEARPDVIFHL---AAIVSGE--AELDFDK-GYRINLDGTRYLFDAIRI 125

Query: 191 ----PSSLKRIVLVSSVGVTKF-NELPWSI--------MNLFGVLKYK--KMGEDFVQKS 235
                    R+V  SS+ V  F   LP+ I        +  +G  K     +  D+ ++ 
Sbjct: 126 ANGKDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRG 183

Query: 236 GLPFTIIR----AGRLTD--GPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA 289
                 IR      R        + +  + +L+     + AVL           S     
Sbjct: 184 FFDGIGIRLPTICIRPGKPNAAASGF-FSNILREPLVGQEAVLPVPESIRHWHASPRSAV 242

Query: 290 EACIQALDIE 299
              I    I+
Sbjct: 243 GFLIHGAMID 252

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 27/127 (21%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           V + G  G VG+ + A L +   +   L+R   K    F                +P + 
Sbjct: 150 VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFW---------------DPLNP 194

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD------WEGVRNLVSALPSSLKRIV 198
              + +G   ++   G   F   R+         +          + L   +  S +   
Sbjct: 195 ASDLLDGADVLVHLAGEPIF--GRF----NDSHKEAIRESRVLPTKFLAELVAESTQCTT 248

Query: 199 LVSSVGV 205
           ++S+  V
Sbjct: 249 MISASAV 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	333
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.98
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.98
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.98
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.98
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.98
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.98
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.98
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.98
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.97
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.97
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.96
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.96
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.96
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.95
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.95
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.95
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.95
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.95
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.95
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.95
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.95
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.95
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.95
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.94
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.94
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.94
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.94
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.94
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.94
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.94
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.94
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.94
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.93
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.93
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.93
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.93
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.93
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.93
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.93
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.93
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.93
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.93
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.93
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.93
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.93
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.93
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.93
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.93
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.93
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.92
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.92
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.92
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.92
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.92
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.92
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.92
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.92
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.92
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.92
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.92
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.92
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.92
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.92
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.92
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.92
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.92
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.92
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.92
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.92
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.92
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.91
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.91
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.91
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.91
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.91
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.91
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.91
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.91
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.9
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.9
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.9
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.9
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.9
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.9
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.9
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.9
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.89
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.89
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.89
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.89
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.89
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.89
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.88
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.88
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.87
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.87
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.86
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.85
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.85
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.84
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.84
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.82
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.81
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.81
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.8
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.75
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.75
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.72
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.67
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.67
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.66
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.66
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.65
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.62
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.47
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.37
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.31
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.11
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.97
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.93
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.91
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.87
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.85
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.84
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.83
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.8
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.66
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.66
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.63
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.62
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.56
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.56
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.51
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.49
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.48
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.41
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.4
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.38
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.33
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.27
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.21
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.19
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.17
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.16
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.14
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.13
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.05
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.04
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.03
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.98
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.98
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.96
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.95
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.95
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.94
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.93
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.93
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.92
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.91
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.88
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.87
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.85
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.8
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.79
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.79
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.75
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.75
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.72
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.71
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.71
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.7
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.69
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.69
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.68
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.67
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.67
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.63
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.62
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.62
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.61
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.61
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.6
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.59
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.59
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.57
1lnq_A	336	MTHK channels, potassium channel related protein;	97.57
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.54
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.54
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.49
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.49
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.48
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.48
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.47
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.46
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.45
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.45
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.44
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.43
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.42
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.41
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.38
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.35
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.35
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.34
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.33
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.33
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.32
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.32
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.31
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.31
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.31
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.31
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.3
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.3
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.29
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.29
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.29
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.28
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.28
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.27
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.27
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.27
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.26
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.24
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.23
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.22
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.22
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.18
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.18
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.18
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.17
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.17
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.16
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.16
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.14
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.11
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.11
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.11
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.11
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	97.1
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.1
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.1
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.09
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.09
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.09
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.08
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.07
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.07
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.07
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.07
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.07
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.05
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.05
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.05
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.04
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.03
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.01
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.0
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.99
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.99
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.98
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.96
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.96
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.96
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.95
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.93
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.92
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.92
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.91
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.91
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.9
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.89
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.89
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.88
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.87
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.87
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.87
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.87
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.86
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.82
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.81
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.8
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.79
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.79
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.78
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.77
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.77
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.76
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.76
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.75
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.75
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.74
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.73
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.73
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.71
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.71
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	96.7

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.3e-34  Score=260.85  Aligned_cols=227  Identities=20%  Similarity=0.143  Sum_probs=184.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|+||||||+||||++|+++|+++|++|++++|++.... +      .+++++.+|++ ++++. ++++++|+|||+|+
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~Dl~-~~~~~-~~~~~~d~Vih~a~   71 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I------NDYEYRVSDYT-LEDLI-NQLNDVDAVVHLAA   71 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHH-HHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C------CceEEEEcccc-HHHHH-HhhcCCCEEEEccc
Confidence            3579999999999999999999999999999999844332 2      17899999999 98898 88999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      .....     .....+++|+.++.+++++++. +++||||+||.++|+..       +.+..+.+.|+  .+|..+|+++
T Consensus        72 ~~~~~-----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~  144 (311)
T 3m2p_A           72 TRGSQ-----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYG--VSKLACEHIG  144 (311)
T ss_dssp             CCCSS-----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHH--HHHHHHHHHH
T ss_pred             cCCCC-----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhH--HHHHHHHHHH
Confidence            86422     4466889999999999998854 89999999999998742       23444556677  4555566666


Q ss_pred             Hh----cCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEE
Q 019935          233 QK----SGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIY  306 (333)
Q Consensus       233 ~~----~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~  306 (333)
                      +.    .|++++++||+.+ ||+...  ..+..+...+..+.....+++++..++|+|++|+|++++.+++++. .+++|
T Consensus       145 ~~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~  222 (311)
T 3m2p_A          145 NIYSRKKGLCIKNLRFAHL-YGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK-VSGTF  222 (311)
T ss_dssp             HHHHHHSCCEEEEEEECEE-ECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-CCEEE
T ss_pred             HHHHHHcCCCEEEEeeCce-eCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-CCCeE
Confidence            54    7999999999955 788765  3466666666666677777889999999999999999999999876 68899


Q ss_pred             EecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          307 EINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       307 ~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++       +.+++.|+++.+++
T Consensus       223 ~i~~~-------~~~s~~e~~~~i~~  241 (311)
T 3m2p_A          223 NIGSG-------DALTNYEVANTINN  241 (311)
T ss_dssp             EECCS-------CEECHHHHHHHHHH
T ss_pred             EeCCC-------CcccHHHHHHHHHH
Confidence            99985       77999999999875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.4e-35  Score=270.07  Aligned_cols=241  Identities=17%  Similarity=0.119  Sum_probs=187.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----hhccCC---CCceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      +++|+||||||+||||++|+++|+++|++|++++|+......    +.....   ..+++++.+|++|++++. ++++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCE-QVMKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHH-HHTTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHH-HHhcCC
Confidence            456899999999999999999999999999999997643222    211100   168999999999999999 889999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC-------CCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~  224 (333)
                      |+|||+|+..... ..+.+....+++|+.++.+++++++ .++++|||+||.++|+..       +.+..+.+.|+.+  
T Consensus       102 d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s--  178 (351)
T 3ruf_A          102 DHVLHQAALGSVP-RSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVT--  178 (351)
T ss_dssp             SEEEECCCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHH--
T ss_pred             CEEEECCccCCcc-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHH--
Confidence            9999999974311 1122334467899999999999885 489999999999999743       2333455667744  


Q ss_pred             HHHHHHHHH----hcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          225 KKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       225 k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |..+|++++    +.|++++++||+.+ ||+....      .+..++..+..+.....+++++..++|+|++|+|++++.
T Consensus       179 K~~~E~~~~~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~  257 (351)
T 3ruf_A          179 KYVNEIYAQVYARTYGFKTIGLRYFNV-FGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNIL  257 (351)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEEECSE-ESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeCce-eCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHH
Confidence            555665554    56999999999955 7887532      245566666666677778899999999999999999999


Q ss_pred             hccC-cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDI-EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~-~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.. +...+++||+++|       ..++|.|+++.+++
T Consensus       258 ~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  289 (351)
T 3ruf_A          258 SALAKDSAKDNIYNVAVG-------DRTTLNELSGYIYD  289 (351)
T ss_dssp             HHTCCGGGCSEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             HHhhccccCCCEEEeCCC-------CcccHHHHHHHHHH
Confidence            9987 4566899999995       77999999998875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-34  Score=264.16  Aligned_cols=243  Identities=18%  Similarity=0.165  Sum_probs=183.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcC-
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG-  151 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~-  151 (333)
                      ++..++|+|||||||||||++|+++|+++|  ++|++++|...  ....+.......+++++.+|++|++.+. +++++ 
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~   97 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLE-HVIKER   97 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH-HHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHH-HHHhhc
Confidence            445667899999999999999999999999  67778877642  2222222222468999999999999999 88876 


Q ss_pred             -CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC--------CCCccchhhhHH
Q 019935          152 -VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGV  221 (333)
Q Consensus       152 -~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~--------~~~~~~~~~~~~  221 (333)
                       +|+|||+|+..... ..+......+++|+.++.+++++++ .++++|||+||.++|+..        +.+..+.+.|+.
T Consensus        98 ~~d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~  176 (346)
T 4egb_A           98 DVQVIVNFAAESHVD-RSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSS  176 (346)
T ss_dssp             TCCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHH
T ss_pred             CCCEEEECCcccchh-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHH
Confidence             99999999986532 2334556688999999999999885 489999999999998853        234445566774


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                        +|..+|++++    +.|++++++||+.+ ||+...  ..+..+...+..+.....+++++..++|+|++|+|++++.+
T Consensus       177 --sK~~~E~~~~~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  253 (346)
T 4egb_A          177 --SKASADMIALAYYKTYQLPVIVTRCSNN-YGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVV  253 (346)
T ss_dssp             --HHHHHHHHHHHHHHHHCCCEEEEEECEE-ESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHhCCCEEEEeecce-eCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHH
Confidence              4555665554    36999999999955 788753  33556666666666677788899999999999999999999


Q ss_pred             ccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          296 LDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       296 l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.++. .+++||++++       ..+++.|+++.+++
T Consensus       254 ~~~~~-~g~~~~i~~~-------~~~s~~e~~~~i~~  282 (346)
T 4egb_A          254 LHKGR-VGEVYNIGGN-------NEKTNVEVVEQIIT  282 (346)
T ss_dssp             HHHCC-TTCEEEECCS-------CCEEHHHHHHHHHH
T ss_pred             HhcCC-CCCEEEECCC-------CceeHHHHHHHHHH
Confidence            99876 6889999995       67999999998875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.8e-35  Score=270.86  Aligned_cols=241  Identities=16%  Similarity=0.148  Sum_probs=189.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCC-CcCCCchhhhcCCcE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTH  154 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~-d~~~~~~~~~~~~d~  154 (333)
                      +..+++|+||||||+||||++|+++|+++ |++|++++|+.++...+..   ..+++++.+|++ |.+.+. ++++++|+
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~~d~~~~~-~~~~~~d~   94 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK---HERMHFFEGDITINKEWVE-YHVKKCDV   94 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG---STTEEEEECCTTTCHHHHH-HHHHHCSE
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc---CCCeEEEeCccCCCHHHHH-HHhccCCE
Confidence            44566789999999999999999999998 9999999999877665543   468999999999 888888 88999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC-Cc-------------cchhhh
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL-PW-------------SIMNLF  219 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~-~~-------------~~~~~~  219 (333)
                      |||+|+..... ..+..+...+++|+.++.+++++++. + +||||+||.++|+.... ++             .+.+.|
T Consensus        95 Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y  172 (372)
T 3slg_A           95 ILPLVAIATPA-TYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIY  172 (372)
T ss_dssp             EEECBCCCCHH-HHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHH
T ss_pred             EEEcCccccHH-HHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcH
Confidence            99999975411 11123345678899999999998855 7 99999999999985321 22             233355


Q ss_pred             HHHHHHHHHHHHHHhc---CCCEEEEEcccccCCCCCCc----------chHHHHHHhhcccceeecCCCCcccccccHH
Q 019935          220 GVLKYKKMGEDFVQKS---GLPFTIIRAGRLTDGPYTSY----------DLNTLLKATAGERRAVLMGQGDKLIGEVSRI  286 (333)
Q Consensus       220 ~~~k~k~~~e~~l~~~---gi~~~~vrpg~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  286 (333)
                      +  .+|..+|++++..   |++++++||+.+ ||+....          .+..++..+..+.....+++++..++|+|++
T Consensus       173 ~--~sK~~~E~~~~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  249 (372)
T 3slg_A          173 A--CSKQLMDRVIWGYGMEGLNFTLFRPFNW-IGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVD  249 (372)
T ss_dssp             H--HHHHHHHHHHHHHHTTTCEEEEEEECSE-ECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHH
T ss_pred             H--HHHHHHHHHHHHHHHCCCCEEEEccccc-cCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHH
Confidence            5  6677788887766   999999999955 7887432          3455666665566777788889999999999


Q ss_pred             HHHHHHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          287 VVAEACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       287 Dva~a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |+|++++.+++++.  ..+++||++++      ...++|.|+++.+++
T Consensus       250 Dva~a~~~~~~~~~~~~~~~~~ni~~~------~~~~s~~e~~~~i~~  291 (372)
T 3slg_A          250 DGISALMKIIENSNGVATGKIYNIGNP------NNNFSVRELANKMLE  291 (372)
T ss_dssp             HHHHHHHHHHHCGGGTTTTEEEEECCT------TCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCcCCCceEEeCCC------CCCccHHHHHHHHHH
Confidence            99999999999875  56899999982      168999999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=7e-34  Score=246.15  Aligned_cols=219  Identities=20%  Similarity=0.334  Sum_probs=173.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCce-EEEEccCCCcCCCchhhhcCCcEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ...+++|+||||||+|+||++++++|+++|++|++++|++++.+.+.    ..++ +++.+|++  +++. +.++++|+|
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~~~~~~~~~~Dl~--~~~~-~~~~~~D~v   88 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----ERGASDIVVANLE--EDFS-HAFASIDAV   88 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HTTCSEEEECCTT--SCCG-GGGTTCSEE
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----hCCCceEEEcccH--HHHH-HHHcCCCEE
Confidence            45677899999999999999999999999999999999988877665    3478 99999999  7788 889999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHh
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK  234 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~  234 (333)
                      |||||...     .......+++|+.++.+++++++. ++++||++||.+.+..+..+ .+...|  ..+|..+|.++++
T Consensus        89 i~~ag~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~-~~~~~Y--~~sK~~~e~~~~~  160 (236)
T 3e8x_A           89 VFAAGSGP-----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP-MNMRHY--LVAKRLADDELKR  160 (236)
T ss_dssp             EECCCCCT-----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC-GGGHHH--HHHHHHHHHHHHH
T ss_pred             EECCCCCC-----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh-hhhhhH--HHHHHHHHHHHHH
Confidence            99999753     233455788899999999998854 88999999998776532212 334444  4668889999999


Q ss_pred             cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCC
Q 019935          235 SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGE  314 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~  314 (333)
                      .|+++++||||.+ +|+...             ........++...++++++|+|++++++++++...|++|++++|   
T Consensus       161 ~gi~~~~lrpg~v-~~~~~~-------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~---  223 (236)
T 3e8x_A          161 SSLDYTIVRPGPL-SNEEST-------------GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG---  223 (236)
T ss_dssp             SSSEEEEEEECSE-ECSCCC-------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC---
T ss_pred             CCCCEEEEeCCcc-cCCCCC-------------CeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC---
Confidence            9999999999966 565432             12223345556789999999999999999998777999999983   


Q ss_pred             CCCCCcccHHHHHHHHhc
Q 019935          315 GPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       315 ~~~~~~~s~~e~~~~i~~  332 (333)
                           ..+|+|+++.|++
T Consensus       224 -----~~~~~e~~~~i~~  236 (236)
T 3e8x_A          224 -----DTPIAKVVEQLGS  236 (236)
T ss_dssp             -----SEEHHHHHHTC--
T ss_pred             -----CcCHHHHHHHhcC
Confidence                 4899999988753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.3e-34  Score=264.66  Aligned_cols=232  Identities=21%  Similarity=0.294  Sum_probs=180.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ....++|+||||||+||||++|+++|+++|++|++++|++..          .+++++.+|++|++++. +++.++|+||
T Consensus        14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~-~~~~~~d~vi   82 (347)
T 4id9_A           14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALS-DAIMGVSAVL   82 (347)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHH-HHHTTCSEEE
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHH-HHHhCCCEEE
Confidence            456677899999999999999999999999999999998643          46788999999999999 8899999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccC---------CCCCccchhhhHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF---------NELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~---------~~~~~~~~~~~~~~k~k~  226 (333)
                      |+|+........   ....+++|+.++.+++++++ .++++|||+||.++|+.         ++.+..+.+.|+.  +|.
T Consensus        83 h~A~~~~~~~~~---~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~--sK~  157 (347)
T 4id9_A           83 HLGAFMSWAPAD---RDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGL--TKL  157 (347)
T ss_dssp             ECCCCCCSSGGG---HHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHH--HHH
T ss_pred             ECCcccCcchhh---HHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHH--HHH
Confidence            999976432221   14578899999999999885 48999999999999975         1233445566774  455


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccC-------------CCCC-------------CcchHHHHHHhhcccceeecCCC
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTD-------------GPYT-------------SYDLNTLLKATAGERRAVLMGQG  276 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~-------------g~~~-------------~~~~~~~~~~~~~~~~~~~~~~~  276 (333)
                      .+|+++    ++.|++++++||+.+ |             |+..             ...+..+......+.....++++
T Consensus       158 ~~E~~~~~~~~~~~~~~~ilRp~~v-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (347)
T 4id9_A          158 LGEELVRFHQRSGAMETVILRFSHT-QDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN  236 (347)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEECEE-ECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred             HHHHHHHHHHHhcCCceEEEccceE-eecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence            566555    456999999999965 6             5542             22244455555556666777888


Q ss_pred             Cccccc----ccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          277 DKLIGE----VSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       277 ~~~~~~----i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..++|    +|++|+|++++.++.++...+++||+++|       ...+|.|+++.+++
T Consensus       237 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  289 (347)
T 4id9_A          237 ENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGAD-------EPADFAALLPKIAA  289 (347)
T ss_dssp             TTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCS-------SCEEHHHHHHHHHH
T ss_pred             CcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCC-------CcccHHHHHHHHHH
Confidence            888999    99999999999999998666899999995       77999999999865

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.9e-33  Score=253.14  Aligned_cols=232  Identities=14%  Similarity=0.141  Sum_probs=178.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+||||||+||||++|+++|+++|++|++++|+.+......    ..+++++.+|+.|++ +. +.+++ |+|||+|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~-~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WG-AGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TT-TTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HH-hhcCC-CEEEECCCCC
Confidence            58999999999999999999999999999999876654443    567899999999999 88 78888 9999999964


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH--
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV--  232 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l--  232 (333)
                      ... .........+++|+.++.+++++++. ++++|||+||.++|+..       +.+..+.+.|+.+  |..+|.++  
T Consensus        74 ~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~s--K~~~e~~~~~  150 (312)
T 3ko8_A           74 EVR-LSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAA--KAAGEVMCAT  150 (312)
T ss_dssp             SSS-GGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH--HHHHHHHHHH
T ss_pred             Cch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHH--HHHHHHHHHH
Confidence            321 22233445678899999999998854 88999999999999743       2445566777755  55555554  


Q ss_pred             --HhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhccC---cccCCcE
Q 019935          233 --QKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALDI---EFTEGEI  305 (333)
Q Consensus       233 --~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~---~~~~g~~  305 (333)
                        ++.|++++++||+.+ ||+.... ....+...+... .....+++++..++|+|++|+|++++.++++   +...+++
T Consensus       151 ~~~~~g~~~~~lrp~~v-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~  229 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANV-VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLA  229 (312)
T ss_dssp             HHHHHCCEEEEEEECEE-ECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             HHHHhCCCEEEEeeccc-cCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcE
Confidence              346999999999955 7887543 233444443333 4556788889999999999999999999987   4455789


Q ss_pred             EEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          306 YEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       306 ~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ||++++       ...++.|+++.+++
T Consensus       230 ~ni~~~-------~~~s~~e~~~~i~~  249 (312)
T 3ko8_A          230 LNVGNV-------DAVRVLDIAQIVAE  249 (312)
T ss_dssp             EEESCS-------SCEEHHHHHHHHHH
T ss_pred             EEEcCC-------CceeHHHHHHHHHH
Confidence            999995       77999999998865

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.7e-33  Score=260.59  Aligned_cols=235  Identities=14%  Similarity=0.058  Sum_probs=181.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|+||||||+||||++|+++|+++|++|++++|+..+.....    ..+++++.+|++|++++. ++++++|+|||+|+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~v~~~~~Dl~d~~~~~-~~~~~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCL-KVTEGVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHH-HHHTTCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----cCCceEEECCCCCHHHHH-HHhCCCCEEEECce
Confidence            5689999999999999999999999999999999876543322    347889999999999998 88999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCC--------------CccchhhhHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL--------------PWSIMNLFGVLKYK  225 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~--------------~~~~~~~~~~~k~k  225 (333)
                      ...............+++|+.++.+++++++ .++++|||+||.++|+....              +..+.+.|+  .+|
T Consensus       103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~--~sK  180 (379)
T 2c5a_A          103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG--LEK  180 (379)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHH--HHH
T ss_pred             ecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhH--HHH
Confidence            7531100023345578899999999999885 48899999999999874211              233445666  455


Q ss_pred             HHHHHHH----HhcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccc-eeecCCCCcccccccHHHHHHHHHH
Q 019935          226 KMGEDFV----QKSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       226 ~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      ..+|.++    ++.|++++++||+.+ ||+....      .+..+...+..+.. +..+++++..++|+|++|+|++++.
T Consensus       181 ~~~E~~~~~~~~~~gi~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~  259 (379)
T 2c5a_A          181 LATEELCKHYNKDFGIECRIGRFHNI-YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  259 (379)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeCce-eCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHH
Confidence            5566555    346999999999955 7886532      24445544433333 5667888889999999999999999


Q ss_pred             hccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++  .+++||++++       ..+++.|+++.+++
T Consensus       260 ~l~~~--~~~~~ni~~~-------~~~s~~e~~~~i~~  288 (379)
T 2c5a_A          260 LTKSD--FREPVNIGSD-------EMVSMNEMAEMVLS  288 (379)
T ss_dssp             HHHSS--CCSCEEECCC-------CCEEHHHHHHHHHH
T ss_pred             Hhhcc--CCCeEEeCCC-------CccCHHHHHHHHHH
Confidence            99876  4679999985       77999999999875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-33  Score=248.97  Aligned_cols=232  Identities=17%  Similarity=0.209  Sum_probs=175.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      ||+||||||+||||++|+++|+++| .|+++++.........    ..+++++.+|++| +++. ++++++|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~----~~~~~~~~~Dl~~-~~~~-~~~~~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV----NEAARLVKADLAA-DDIK-DYLKGAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS----CTTEEEECCCTTT-SCCH-HHHTTCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc----CCCcEEEECcCCh-HHHH-HHhcCCCEEEECCCC
Confidence            3689999999999999999999999 5555554332222222    5678999999999 8898 899999999999996


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH-
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV-  232 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l-  232 (333)
                      .... .........+++|+.++.+++++++. ++++|||+||.++|+..       +.+..+.+.|+.+  |..+|.++ 
T Consensus        74 ~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s--K~~~e~~~~  150 (313)
T 3ehe_A           74 PDVR-IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGAS--KLACEALIE  150 (313)
T ss_dssp             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHH--HHHHHHHHH
T ss_pred             CChh-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHH
Confidence            4321 22334456788999999999998854 88999999999999743       2344556677755  55555554 


Q ss_pred             ---HhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEE
Q 019935          233 ---QKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYE  307 (333)
Q Consensus       233 ---~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~  307 (333)
                         ++.|++++++||+.+ ||+.... .+..++...... .....+++++..++|+|++|+|++++.+++. ...+++||
T Consensus       151 ~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~n  228 (313)
T 3ehe_A          151 SYCHTFDMQAWIYRFANV-IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG-DERVNIFN  228 (313)
T ss_dssp             HHHHHTTCEEEEEECSCE-ESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC-CSSEEEEE
T ss_pred             HHHHhcCCCEEEEeeccc-cCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc-CCCCceEE
Confidence               456999999999955 7886542 233444433333 5556788899999999999999999999994 34578999


Q ss_pred             ecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          308 INSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       308 v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++|       ..+++.|+++.+++
T Consensus       229 i~~~-------~~~s~~e~~~~i~~  246 (313)
T 3ehe_A          229 IGSE-------DQIKVKRIAEIVCE  246 (313)
T ss_dssp             CCCS-------CCEEHHHHHHHHHH
T ss_pred             ECCC-------CCeeHHHHHHHHHH
Confidence            9995       77999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=6.4e-33  Score=255.12  Aligned_cols=237  Identities=19%  Similarity=0.192  Sum_probs=185.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHh--CCCeEEEEEcCcchh-------hhh--hccCCCCceEEEEccCCCcCCCchh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLS--RNIKSRLLLRDPEKA-------TTL--FGKQDEETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~R~~~~~-------~~~--~~~~~~~~~~~v~~D~~d~~~~~~~  147 (333)
                      ++++|+||||||+||||++|+++|++  .|++|++++|+....       +.+  .......++.++.+|++|+++++ +
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~   85 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR-R   85 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH-H
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH-H
Confidence            45678999999999999999999999  899999999976411       000  00111456799999999999998 7


Q ss_pred             h-hcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC------Cccchhhh
Q 019935          148 I-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL------PWSIMNLF  219 (333)
Q Consensus       148 ~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~------~~~~~~~~  219 (333)
                      + ..++|+||||||....   ........+++|+.++.+++++++. +++ |||+||.++|+....      +..+.+.|
T Consensus        86 ~~~~~~D~vih~A~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y  161 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDT---TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVY  161 (362)
T ss_dssp             HTTSCCSEEEECCCCCGG---GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHH
T ss_pred             hhccCCCEEEECCccCCc---cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChh
Confidence            7 7899999999996542   2344456789999999999998854 665 999999999985433      33445566


Q ss_pred             HHHHHHHHHHHHHHhcC--CCEEEEEcccccCCCCCC------cchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          220 GVLKYKKMGEDFVQKSG--LPFTIIRAGRLTDGPYTS------YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       220 ~~~k~k~~~e~~l~~~g--i~~~~vrpg~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +  .+|..+|.+++...  ++++++||+.+ |||...      ..+..+......+.....+++++..++|+|++|+|++
T Consensus       162 ~--~sK~~~E~~~~~~~~~~~~~~lR~~~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  238 (362)
T 3sxp_A          162 G--FSKLCMDEFVLSHSNDNVQVGLRYFNV-YGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQA  238 (362)
T ss_dssp             H--HHHHHHHHHHHHTTTTSCEEEEEECSE-ESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHH
T ss_pred             H--HHHHHHHHHHHHHhccCCEEEEEeCce-eCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHH
Confidence            6  56777888888765  88999999955 788754      2245555555556666677888899999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++.+. .| +||+++|       ...+|.|+++.+++
T Consensus       239 i~~~~~~~~-~g-~~~i~~~-------~~~s~~e~~~~i~~  270 (362)
T 3sxp_A          239 NVKAMKAQK-SG-VYNVGYS-------QARSYNEIVSILKE  270 (362)
T ss_dssp             HHHHTTCSS-CE-EEEESCS-------CEEEHHHHHHHHHH
T ss_pred             HHHHHhcCC-CC-EEEeCCC-------CCccHHHHHHHHHH
Confidence            999999875 36 9999985       77999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.4e-33  Score=252.42  Aligned_cols=228  Identities=14%  Similarity=0.108  Sum_probs=171.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|+||||||+||||++|+++|+++|++|++++|++++.+.+.    ..+++++.+|++|++++. ++++++|+|||+|+.
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~-~~~~~~d~vih~a~~   87 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLE-RALRGLDGVIFSAGY   87 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHH-HHTTTCSEEEEC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHH-HHHcCCCEEEECCcc
Confidence            358999999999999999999999999999999877655443    347899999999999998 889999999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--------CCccc----hhhhHHHHHHHHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--------LPWSI----MNLFGVLKYKKMG  228 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--------~~~~~----~~~~~~~k~k~~~  228 (333)
                      ...   ...+....+++|+.++.+++++++. ++++||++||.++|+...        .+..+    .+.|+  .+|..+
T Consensus        88 ~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~--~sK~~~  162 (342)
T 2x4g_A           88 YPS---RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYV--LCKWAL  162 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHH--HHHHHH
T ss_pred             CcC---CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHH--HHHHHH
Confidence            531   2234566889999999999998854 889999999999987432        22333    45566  556667


Q ss_pred             HHHHHh---cCCCEEEEEcccccCCCCC-CcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCc
Q 019935          229 EDFVQK---SGLPFTIIRAGRLTDGPYT-SYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGE  304 (333)
Q Consensus       229 e~~l~~---~gi~~~~vrpg~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~  304 (333)
                      |.+++.   .|++++++||+.+ ||+.. ...+..+...+..+.....   ++..++++|++|+|++++.+++++.. ++
T Consensus       163 e~~~~~~~~~g~~~~ilrp~~v-~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~-g~  237 (342)
T 2x4g_A          163 DEQAREQARNGLPVVIGIPGMV-LGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI-GE  237 (342)
T ss_dssp             HHHHHHHHHTTCCEEEEEECEE-ECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT-TC
T ss_pred             HHHHHHHhhcCCcEEEEeCCce-ECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC-Cc
Confidence            766654   3999999999955 78865 2114444444443333322   56788999999999999999987655 88


Q ss_pred             EEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          305 IYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       305 ~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +||++++       . +++.|+++.+++
T Consensus       238 ~~~v~~~-------~-~s~~e~~~~i~~  257 (342)
T 2x4g_A          238 RYLLTGH-------N-LEMADLTRRIAE  257 (342)
T ss_dssp             EEEECCE-------E-EEHHHHHHHHHH
T ss_pred             eEEEcCC-------c-ccHHHHHHHHHH
Confidence            9999994       6 999999998864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.1e-32  Score=245.30  Aligned_cols=216  Identities=19%  Similarity=0.230  Sum_probs=173.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC-CcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG-VTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~-~d~vi~~a~  160 (333)
                      +|+||||| +||||++|+++|+++|++|++++|+.++.        ..+++++.+|++|++++. +++++ +|+|||+|+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~-~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLA-SIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCT-TGGGGCCSEEEECHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHH-HhhcCCCCEEEEeCC
Confidence            57899999 59999999999999999999999987652        467899999999999999 78887 999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ...      ......+++|+.++.+++++++. ++++|||+||.++|+..       +.+..+.+.|+  .+|..+|++ 
T Consensus        73 ~~~------~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~-  143 (286)
T 3gpi_A           73 ASE------YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG--KRMLEAEAL-  143 (286)
T ss_dssp             HHH------HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH--HHHHHHHHH-
T ss_pred             CCC------CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh--HHHHHHHHH-
Confidence            642      23355788999999999998865 88999999999999843       33445566676  567778888 


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc--ccCCcEEEecC
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE--FTEGEIYEINS  310 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~--~~~g~~~~v~~  310 (333)
                      ++. ++++++||+.+ ||+....    +...+.. .  ..++.++..++|+|++|+|++++.+++++  ...+++||+++
T Consensus       144 ~~~-~~~~ilR~~~v-~G~~~~~----~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~  214 (286)
T 3gpi_A          144 LAA-YSSTILRFSGI-YGPGRLR----MIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTD  214 (286)
T ss_dssp             GGG-SSEEEEEECEE-EBTTBCH----HHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             Hhc-CCeEEEecccc-cCCCchh----HHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeC
Confidence            777 99999999955 7887542    3333333 2  23467788899999999999999999985  45588999998


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |       +..++.|+++.+++
T Consensus       215 ~-------~~~s~~e~~~~i~~  229 (286)
T 3gpi_A          215 N-------QPLPVHDLLRWLAD  229 (286)
T ss_dssp             S-------CCEEHHHHHHHHHH
T ss_pred             C-------CCCCHHHHHHHHHH
Confidence            5       77999999999875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.7e-33  Score=254.48  Aligned_cols=241  Identities=16%  Similarity=0.136  Sum_probs=182.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhhhccCC---CCceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      +++|+||||||+||||++|+++|+++|++|++++|+...    ...+.+...   ..+++++.+|++|++++. ++++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN-NACAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH-HHHTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHH-HHhcCC
Confidence            346799999999999999999999999999999997532    222211111   257899999999999998 889999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCC-------CCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~  224 (333)
                      |+|||+|+..... ..+.+....+++|+.++.+++++++ .++++||++||.++|+...       .+..+.+.|+  .+
T Consensus       104 d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~--~s  180 (352)
T 1sb8_A          104 DYVLHQAALGSVP-RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA--VT  180 (352)
T ss_dssp             SEEEECCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH--HH
T ss_pred             CEEEECCcccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhH--HH
Confidence            9999999975311 0112334567899999999999885 4889999999999987432       2223455666  55


Q ss_pred             HHHHHHHHH----hcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          225 KKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       225 k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |..+|.+++    +.|++++++||+.+ ||+....      .+..+...+..+.....+++++..++|++++|+|++++.
T Consensus       181 K~~~e~~~~~~~~~~g~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~  259 (352)
T 1sb8_A          181 KYVNELYADVFSRCYGFSTIGLRYFNV-FGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  259 (352)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEEECCE-ECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEECce-eCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence            666666654    45999999999955 7886532      244455544445555667888899999999999999999


Q ss_pred             hccCc-ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDIE-FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~~-~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++... ...+++||+++|       ..++|.|+++.+++
T Consensus       260 ~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  291 (352)
T 1sb8_A          260 AATAGLDARNQVYNIAVG-------GRTSLNQLFFALRD  291 (352)
T ss_dssp             HHTCCGGGCSEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             HHhccccCCCceEEeCCC-------CCccHHHHHHHHHH
Confidence            98873 456889999985       67999999998865

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-33  Score=255.23  Aligned_cols=240  Identities=18%  Similarity=0.216  Sum_probs=179.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc--CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~--~~d~v  155 (333)
                      ++|+||||||+||||++++++|+++|++|++++|+.+.........   ...+++++.+|++|+++++ ++++  ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALA-RIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHH-HHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHH-HHHhccCCcEE
Confidence            4579999999999999999999999999999999765543322111   1457899999999999999 7887  89999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~  227 (333)
                      |||||..... .........+++|+.++.+++++++. ++++||++||.++|+..       +.+..+.+.|+.  +|..
T Consensus        83 ih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~--sK~~  159 (341)
T 3enk_A           83 IHFAALKAVG-ESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQ--TKLM  159 (341)
T ss_dssp             EECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHH--HHHH
T ss_pred             EECccccccC-ccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHH--HHHH
Confidence            9999975311 01122234678899999999998854 78999999999999743       234455566774  4555


Q ss_pred             HHHHHHh----c-CCCEEEEEcccccCCCCC------------CcchHHHHHHhhcc-cceeecC------CCCcccccc
Q 019935          228 GEDFVQK----S-GLPFTIIRAGRLTDGPYT------------SYDLNTLLKATAGE-RRAVLMG------QGDKLIGEV  283 (333)
Q Consensus       228 ~e~~l~~----~-gi~~~~vrpg~~~~g~~~------------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i  283 (333)
                      +|.+++.    . +++++++||+.+ ||+..            ....+.+.....+. ..+..++      +++..++|+
T Consensus       160 ~e~~~~~~~~~~~~~~~~~lRp~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          160 AEQILRDVEAADPSWRVATLRYFNP-VGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEEECEE-ECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHhhcCCCceEEEEeeccc-cCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            6666543    3 499999999955 77743            11123333333333 3444556      788899999


Q ss_pred             cHHHHHHHHHHhccCc--ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          284 SRIVVAEACIQALDIE--FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~--~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++|+|++++.+++++  ...+++||+++|       +.+++.|+++.+++
T Consensus       239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  282 (341)
T 3enk_A          239 HVVDLARGHIAALDALERRDASLTVNLGTG-------RGYSVLEVVRAFEK  282 (341)
T ss_dssp             EHHHHHHHHHHHHHHHHHHTSCEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHHhhhcCCcceEEEeCCC-------CceeHHHHHHHHHH
Confidence            9999999999999873  355889999985       77999999998875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=4.5e-33  Score=257.56  Aligned_cols=237  Identities=16%  Similarity=0.087  Sum_probs=178.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +++|+||||||+||||++|+++|+++| ++|++++|+.........  ...+++++.+|++|++++. ++++++|+|||+
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--~~~~v~~~~~Dl~d~~~l~-~~~~~~d~Vih~  106 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--DHPAVRFSETSITDDALLA-SLQDEYDYVFHL  106 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--CCTTEEEECSCTTCHHHHH-HCCSCCSEEEEC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--CCCceEEEECCCCCHHHHH-HHhhCCCEEEEC
Confidence            456899999999999999999999999 999999998654322211  1457899999999999998 888999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-C-CCCeEEEEeccccccC---------CCC---Cc-cchhhhHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF---------NEL---PW-SIMNLFGVLK  223 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~-~~~~~v~~SS~~~~~~---------~~~---~~-~~~~~~~~~k  223 (333)
                      |+..... ..+.+....+++|+.++.+++++++ . ++++||++||.++|+.         ++.   +. .+.+.|+  .
T Consensus       107 A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~--~  183 (377)
T 2q1s_A          107 ATYHGNQ-SSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYS--M  183 (377)
T ss_dssp             CCCSCHH-HHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHH--H
T ss_pred             CCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchH--H
Confidence            9975311 0112334577899999999999875 4 7899999999999874         222   33 4455666  5


Q ss_pred             HHHHHHHHHH----hcCCCEEEEEcccccCCCCC---------C------cchHHHHHHhhcccceeecCCCCccccccc
Q 019935          224 YKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYT---------S------YDLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       224 ~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~---------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      +|..+|.+++    +.|++++++||+.+ ||+..         .      ..+..+...+..+..+..+++++..++|++
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~  262 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNV-YGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIF  262 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCE-ECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEE
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccE-ECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEE
Confidence            5666676654    35999999999955 78865         2      224555555555555556778889999999


Q ss_pred             HHHHHHH-HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEA-CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a-~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++ ++.+++++. .| +||++++       +.+++.|+++.+++
T Consensus       263 v~Dva~a~i~~~~~~~~-~g-~~~i~~~-------~~~s~~e~~~~i~~  302 (377)
T 2q1s_A          263 VEDVANGLIACAADGTP-GG-VYNIASG-------KETSIADLATKINE  302 (377)
T ss_dssp             HHHHHHHHHHHHHHCCT-TE-EEECCCC-------CCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-CC-eEEecCC-------CceeHHHHHHHHHH
Confidence            9999999 999998865 56 9999985       67999999998865

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.3e-32  Score=248.27  Aligned_cols=234  Identities=16%  Similarity=0.226  Sum_probs=180.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTH  154 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~  154 (333)
                      ..++.+|+||||||+||||++|+++|+++|++|++++|+..........  ..+++++.+|++|+++++ ++++  ++|+
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--l~~v~~~~~Dl~d~~~~~-~~~~~~~~D~   91 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP--VAGLSVIEGSVTDAGLLE-RAFDSFKPTH   91 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS--CTTEEEEECCTTCHHHHH-HHHHHHCCSE
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc--cCCceEEEeeCCCHHHHH-HHHhhcCCCE
Confidence            4456778999999999999999999999999999999976543322222  257899999999999998 8888  9999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC---Ccc----chhhhHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL---PWS----IMNLFGVLKYKK  226 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~---~~~----~~~~~~~~k~k~  226 (333)
                      ||||||.....  ......  +++|+.++.+++++++. ++++||++||.++|+....   ++.    +.+.|+  .+|.
T Consensus        92 vih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~--~sK~  165 (330)
T 2pzm_A           92 VVHSAAAYKDP--DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYG--ISKT  165 (330)
T ss_dssp             EEECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHH--HHHH
T ss_pred             EEECCccCCCc--cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHH--HHHH
Confidence            99999976421  111112  78999999999998854 8899999999999875421   211    344555  6677


Q ss_pred             HHHHHHHhcCCCEEEEEcccccCCCCCC-cchHHHHHHhhcccceeecCCCCcccccccHHHHHH-HHHHhccCcccCCc
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLTDGPYTS-YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE-ACIQALDIEFTEGE  304 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-a~~~~l~~~~~~g~  304 (333)
                      .+|.+++..++++++|||+++ +||... ..+..+...+..+.  ..++++. .+++++++|+|+ +++.+++++.  ++
T Consensus       166 ~~e~~~~~~~~~~~~iR~~~v-~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~--g~  239 (330)
T 2pzm_A          166 AGEAFLMMSDVPVVSLRLANV-TGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP--TG  239 (330)
T ss_dssp             HHHHHHHTCSSCEEEEEECEE-ECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC--CE
T ss_pred             HHHHHHHHcCCCEEEEeeeee-ECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC--CC
Confidence            899999888999999999955 788752 22344444433333  4455666 889999999999 9999998854  88


Q ss_pred             EEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          305 IYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       305 ~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +|++++|       ...+|.|+++.+++
T Consensus       240 ~~~v~~~-------~~~s~~e~~~~i~~  260 (330)
T 2pzm_A          240 VFNVSTG-------EGHSIKEVFDVVLD  260 (330)
T ss_dssp             EEEESCS-------CCEEHHHHHHHHHH
T ss_pred             EEEeCCC-------CCCCHHHHHHHHHH
Confidence            9999985       67899999998864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.4e-32  Score=248.75  Aligned_cols=237  Identities=21%  Similarity=0.206  Sum_probs=179.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC---C---CeEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR---N---IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |+||||||+||||++|+++|+++   |   ++|++++|+..  ..+.+.......+++++.+|++|++++. +++.++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLA-RELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHH-HHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHH-HHhcCCCE
Confidence            47999999999999999999997   8   99999999642  1122211111457899999999999998 88899999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC-------CCCccchhhhHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~  226 (333)
                      |||+|+..... ....+...++++|+.++.+++++++ .++++||++||.++|+..       +.+..+.+.|+.  +|.
T Consensus        80 Vih~A~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~--sK~  156 (337)
T 1r6d_A           80 IVHFAAESHVD-RSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAA--SKA  156 (337)
T ss_dssp             EEECCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHH--HHH
T ss_pred             EEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHH--HHH
Confidence            99999975310 0112345578899999999999885 488999999999998742       224445566774  455


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .+|.++    ++.|++++++||+.+ ||+...  ..+..+......+.....+++++..++|+|++|+|++++.+++++.
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  235 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNN-YGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR  235 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEE-ECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeee-ECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC
Confidence            566554    346999999999955 788753  2244455544445555667888889999999999999999998653


Q ss_pred             cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          301 TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       301 ~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                       .+++||+++|       ...+|.|+++.+++
T Consensus       236 -~g~~~~v~~~-------~~~s~~e~~~~i~~  259 (337)
T 1r6d_A          236 -AGEIYHIGGG-------LELTNRELTGILLD  259 (337)
T ss_dssp             -TTCEEEECCC-------CEEEHHHHHHHHHH
T ss_pred             -CCCEEEeCCC-------CCccHHHHHHHHHH
Confidence             5789999985       77999999998864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=1.3e-32  Score=248.78  Aligned_cols=231  Identities=15%  Similarity=0.148  Sum_probs=178.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~~  158 (333)
                      +.++||||||+||||++|+++|+++|++|++++|+... ..       .+++++.+|++|++++. +++++  +|+||||
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-------l~~~~~~~Dl~d~~~~~-~~~~~~~~d~vih~   81 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-------PNVEMISLDIMDSQRVK-KVISDIKPDYIFHL   81 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-------TTEEEEECCTTCHHHHH-HHHHHHCCSEEEEC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-------ceeeEEECCCCCHHHHH-HHHHhcCCCEEEEc
Confidence            45799999999999999999999999999999998654 21       16889999999999998 77775  9999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCC---------CCCccchhhhHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN---------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~---------~~~~~~~~~~~~~k~k~~  227 (333)
                      ||..... ..++.....+++|+.++.+++++++.  ++++||++||.++|+..         +.+..+.+.|+  .+|..
T Consensus        82 A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~--~sK~~  158 (321)
T 2pk3_A           82 AAKSSVK-DSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYG--VSKAS  158 (321)
T ss_dssp             CSCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHH--HHHHH
T ss_pred             Ccccchh-hhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccH--HHHHH
Confidence            9975311 11234455788999999999998854  58999999999998742         22334556666  55666


Q ss_pred             HHHHHHh----cCCCEEEEEcccccCCCCCCc--chHHHHHHhhc---c--cceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          228 GEDFVQK----SGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAG---E--RRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       228 ~e~~l~~----~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.+++.    .|++++++||+.+ ||+....  .+..+...+..   +  .....+++++..+++++++|+|++++.++
T Consensus       159 ~E~~~~~~~~~~gi~~~ilrp~~v-~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~  237 (321)
T 2pk3_A          159 VGMLARQYVKAYGMDIIHTRTFNH-IGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS  237 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEE-ECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCcc-cCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHH
Confidence            7766654    4999999999955 7887542  23444443332   3  34556788888999999999999999999


Q ss_pred             cCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++ ..+++||+++|       ..++|.|+++.+.+
T Consensus       238 ~~~-~~g~~~~i~~~-------~~~s~~e~~~~i~~  265 (321)
T 2pk3_A          238 QYG-KTGDVYNVCSG-------IGTRIQDVLDLLLA  265 (321)
T ss_dssp             HHC-CTTCEEEESCS-------CEEEHHHHHHHHHH
T ss_pred             hCC-CCCCeEEeCCC-------CCeeHHHHHHHHHH
Confidence            876 34789999985       77999999998875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.5e-32  Score=236.24  Aligned_cols=212  Identities=17%  Similarity=0.224  Sum_probs=160.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|+||||||+||||++++++|+++|++|++++|++++...+     ..+++++.+|++|++++. ++++++|+|||+||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~-~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVC-EVCKGADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHH-HHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHH-HHhcCCCEEEEeCcC
Confidence            47999999999999999999999999999999998765443     368999999999999999 899999999999986


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC------CCCccchhhhHHHHHHHHHH---HH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN------ELPWSIMNLFGVLKYKKMGE---DF  231 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~------~~~~~~~~~~~~~k~k~~~e---~~  231 (333)
                      ..      .. ...+++|+.++.+++++++ .+++|||++||.+++...      +.+..+.+.|+.+|  ..+|   +.
T Consensus        78 ~~------~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK--~~~e~~~~~  148 (227)
T 3dhn_A           78 GW------NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVK--ALGEFYLNF  148 (227)
T ss_dssp             -------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHH--HHHHHHHHT
T ss_pred             CC------CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHH--HHHHHHHHH
Confidence            42      12 2378999999999999885 488999999999876532      23444566777554  4455   44


Q ss_pred             HH-hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          232 VQ-KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       232 l~-~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      ++ +.|++++++||+.+ +|+.......     ..+......  .++. ++|+|++|+|++++.+++++...|++|++++
T Consensus       149 ~~~~~~~~~~ilrp~~v-~g~~~~~~~~-----~~~~~~~~~--~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~  219 (227)
T 3dhn_A          149 LMKEKEIDWVFFSPAAD-MRPGVRTGRY-----RLGKDDMIV--DIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGY  219 (227)
T ss_dssp             GGGCCSSEEEEEECCSE-EESCCCCCCC-----EEESSBCCC--CTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEEC
T ss_pred             HhhccCccEEEEeCCcc-cCCCccccce-----eecCCCccc--CCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEe
Confidence            44 67999999999965 6775432110     011111112  2222 7899999999999999999988899999999


Q ss_pred             CCCCCCCCCcccHH
Q 019935          311 VEGEGPGSDPQKWR  324 (333)
Q Consensus       311 g~~~~~~~~~~s~~  324 (333)
                      .       ++.+|+
T Consensus       220 ~-------~~~~~~  226 (227)
T 3dhn_A          220 L-------EHHHHH  226 (227)
T ss_dssp             C-------SCCC--
T ss_pred             e-------hhcccC
Confidence            4       666664

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.5e-32  Score=248.37  Aligned_cols=238  Identities=17%  Similarity=0.125  Sum_probs=177.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +|+||||||+||||++++++|+++|  ++|++++|+..  ..+.+.......+++++.+|++|+++++ +++.++|+|||
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~vih   81 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVK-ELVRKVDGVVH   81 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH-HHHHTCSEEEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHH-HHhhCCCEEEE
Confidence            4689999999999999999999996  89999999642  2222221111457899999999999998 88899999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccCC-------CCCccchhhhHHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMG  228 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~  228 (333)
                      |||..... ....+...++++|+.++.+++++++. +. ++||++||.++|+..       +.+..+.+.|+  .+|..+
T Consensus        82 ~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~--~sK~~~  158 (336)
T 2hun_A           82 LAAESHVD-RSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYS--ATKAAS  158 (336)
T ss_dssp             CCCCCCHH-HHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHH--HHHHHH
T ss_pred             CCCCcChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccH--HHHHHH
Confidence            99975310 01123345788999999999998854 54 799999999998743       22344556666  455556


Q ss_pred             HHHHH----hcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          229 EDFVQ----KSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       229 e~~l~----~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                      |.+++    +.|++++++||+.+ ||+...  .....+...+..+.....+++++..++++|++|+|++++.+++++. .
T Consensus       159 e~~~~~~~~~~~~~~~ilrp~~v-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~  236 (336)
T 2hun_A          159 DMLVLGWTRTYNLNASITRCTNN-YGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE-S  236 (336)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECEE-ESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC-T
T ss_pred             HHHHHHHHHHhCCCEEEEeeeee-eCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC-C
Confidence            65554    46999999999955 788753  2244455555545556667888888999999999999999997643 5


Q ss_pred             CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          303 GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       303 g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++||+++|       ...++.|+++.+++
T Consensus       237 g~~~~v~~~-------~~~s~~e~~~~i~~  259 (336)
T 2hun_A          237 REIYNISAG-------EEKTNLEVVKIILR  259 (336)
T ss_dssp             TCEEEECCS-------CEECHHHHHHHHHH
T ss_pred             CCEEEeCCC-------CcccHHHHHHHHHH
Confidence            789999985       77899999998864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-33  Score=252.34  Aligned_cols=238  Identities=18%  Similarity=0.196  Sum_probs=176.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hh----hhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KA----TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~----~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~  154 (333)
                      ||+||||||+||||++|+++|+++|++|++++|+.. ..    ..+..   ..+++++.+|++|+++++ +++++  +|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~   76 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVT-RLITKYMPDS   76 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHH-HHHHHHCCSE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHH-HHHhccCCCE
Confidence            368999999999999999999999999999998531 11    12221   346889999999999998 88887  999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEeccccccCCC----------------------
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKFNE----------------------  210 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~~~~~~~~----------------------  210 (333)
                      |||+|+..... ..+......+++|+.++.+++++++. +++ +||++||.++|+...                      
T Consensus        77 vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           77 CFHLAGQVAMT-TSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             EEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             EEECCcccChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            99999975310 01123345788999999999998854 775 999999999987421                      


Q ss_pred             -CCccchhhhHHHHHHHHHHHHHHh----cCCCEEEEEcccccCCCCCCc-----chHHHHHHhhccc-----ceeecCC
Q 019935          211 -LPWSIMNLFGVLKYKKMGEDFVQK----SGLPFTIIRAGRLTDGPYTSY-----DLNTLLKATAGER-----RAVLMGQ  275 (333)
Q Consensus       211 -~~~~~~~~~~~~k~k~~~e~~l~~----~gi~~~~vrpg~~~~g~~~~~-----~~~~~~~~~~~~~-----~~~~~~~  275 (333)
                       .+..+.+.|+  .+|..+|.+++.    .|++++++||+.+ +|+....     .+..+......+.     ....+++
T Consensus       156 ~~~~~~~~~Y~--~sK~~~E~~~~~~~~~~gi~~~ilrp~~v-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  232 (347)
T 1orr_A          156 STQLDFHSPYG--CSKGAADQYMLDYARIFGLNTVVFRHSSM-YGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN  232 (347)
T ss_dssp             TSCCCCCHHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECCE-ECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred             cCCCCCCCchH--HHHHHHHHHHHHHHHHhCCcEEEEccCce-eCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecC
Confidence             1233455666  556666666543    5999999999955 7886432     2344443333233     4556788


Q ss_pred             CCcccccccHHHHHHHHHHhccC-cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDI-EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~-~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++..++|++++|+|++++.++++ +...|++|++++|+.     ..++|.|+++.+++
T Consensus       233 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~-----~~~s~~e~~~~i~~  285 (347)
T 1orr_A          233 GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIV-----NSLSLLELFKLLED  285 (347)
T ss_dssp             SCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGG-----GEEEHHHHHHHHHH
T ss_pred             CcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCC-----CCccHHHHHHHHHH
Confidence            89999999999999999999986 335588999998521     25899999998864

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.98  E-value=2.4e-32  Score=249.77  Aligned_cols=236  Identities=15%  Similarity=0.173  Sum_probs=179.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +|+||||||+||||++|+++|+++  |++|++++|+...  ...+. .....+++++.+|++|++++. ++++++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVD-KLAAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHH-HHHTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCHHHHH-HHhhcCCEEEE
Confidence            478999999999999999999998  8999999997532  11111 111467899999999999998 88999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------------------CCccchh
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------------------LPWSIMN  217 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------------------~~~~~~~  217 (333)
                      +||..... ..+......+++|+.++.+++++++. ++ +|||+||.++|+...                   .+..+.+
T Consensus        82 ~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           82 YAAESHND-NSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             CCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             CCcccCcc-chhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            99975310 01123455788999999999998854 76 999999999886431                   1334455


Q ss_pred             hhHHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          218 LFGVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       218 ~~~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .|+  .+|..+|.+++    +.|++++++||+.+ ||+...  ..+..+......+.....+++++..++|+|++|+|++
T Consensus       160 ~Y~--~sK~~~e~~~~~~~~~~gi~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  236 (348)
T 1oc2_A          160 PYS--STKAASDLIVKAWVRSFGVKATISNCSNN-YGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  236 (348)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHCCEEEEEEECCE-ESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             ccH--HHHHHHHHHHHHHHHHhCCCEEEEeecee-eCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence            666  45555665554    45999999999955 788753  2244455444445555667888889999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++.+ ..|++||+++|       ...++.|+++.+++
T Consensus       237 ~~~~~~~~-~~g~~~~i~~~-------~~~s~~e~~~~i~~  269 (348)
T 1oc2_A          237 VWAILTKG-RMGETYLIGAD-------GEKNNKEVLELILE  269 (348)
T ss_dssp             HHHHHHHC-CTTCEEEECCS-------CEEEHHHHHHHHHH
T ss_pred             HHHHhhCC-CCCCeEEeCCC-------CCCCHHHHHHHHHH
Confidence            99999765 35789999985       77999999998864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.98  E-value=2e-32  Score=255.28  Aligned_cols=240  Identities=15%  Similarity=0.150  Sum_probs=177.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-----------------hhhc--cCCCCceEEEEccCCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-----------------TLFG--KQDEETLQVCKGDTRN  140 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----------------~~~~--~~~~~~~~~v~~D~~d  140 (333)
                      ..+++||||||+||||++|+++|+++|++|++++|......                 .+..  .....+++++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            35679999999999999999999999999999998643211                 1100  0014578899999999


Q ss_pred             cCCCchhhhcC--CcEEEEcCCCCCCCCCCCCCCC---CCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccCCCC--
Q 019935          141 PKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGDN---TPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFNEL--  211 (333)
Q Consensus       141 ~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~---~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~~~~--  211 (333)
                      ++++. +++++  +|+||||||...... .+..+.   ..+++|+.|+.+++++++. ++ ++||++||.++|+....  
T Consensus        89 ~~~~~-~~~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~  166 (404)
T 1i24_A           89 FEFLA-ESFKSFEPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI  166 (404)
T ss_dssp             HHHHH-HHHHHHCCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred             HHHHH-HHHhccCCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCC
Confidence            99888 78876  999999999753210 111111   2568899999999998854 66 59999999999975321  


Q ss_pred             ------------------CccchhhhHHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCC---------------
Q 019935          212 ------------------PWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS---------------  254 (333)
Q Consensus       212 ------------------~~~~~~~~~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~---------------  254 (333)
                                        +..+.+.|+.+  |..+|.+++    +.|++++++||+.+ |||...               
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~s--K~~~e~~~~~~~~~~gi~~~ivrp~~v-~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYHLS--KVHDSHNIAFTCKAWGIRATDLNQGVV-YGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHH--HHHHHHHHHHHHHHHCCEEEEEEECEE-ECSCCTTGGGSGGGCCCCCCS
T ss_pred             CccccccccccccccccCCCCCCChhHHH--HHHHHHHHHHHHHhcCCeEEEEeccee-eCCCCCccccccccccccccc
Confidence                              33345566644  555665543    45999999999955 788642               


Q ss_pred             ----cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCC--cEEEecCCCCCCCCCCcccHHHHHH
Q 019935          255 ----YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG--EIYEINSVEGEGPGSDPQKWRELFK  328 (333)
Q Consensus       255 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g--~~~~v~~g~~~~~~~~~~s~~e~~~  328 (333)
                          ..+..++..+..+..+..+++++..++|+|++|+|++++.+++.+...|  ++||+++        ..+++.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--------~~~s~~e~~~  315 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--------EQFSVNELAS  315 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--------EEEEHHHHHH
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--------CCCcHHHHHH
Confidence                2345565555555566677888899999999999999999998865446  7999987        5589999999


Q ss_pred             HHhc
Q 019935          329 AAKA  332 (333)
Q Consensus       329 ~i~~  332 (333)
                      .+++
T Consensus       316 ~i~~  319 (404)
T 1i24_A          316 LVTK  319 (404)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.98  E-value=3.2e-32  Score=248.36  Aligned_cols=235  Identities=17%  Similarity=0.141  Sum_probs=178.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC-CCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~-~~~~~~~~~~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+++ |++|++++|+.++...+..   ..+++++.+|++|.. .++ ++++++|+|||+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~-~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIE-YHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT---CTTEEEEECCTTTCSHHHH-HHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc---CCCeEEEeccccCcHHHHH-hhccCCCEEEEccc
Confidence            47999999999999999999998 8999999998876654432   457899999999854 566 77889999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC-Cc-------------cchhhhHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL-PW-------------SIMNLFGVLKYK  225 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~-~~-------------~~~~~~~~~k~k  225 (333)
                      ..... .........+++|+.++.+++++++. + ++|||+||.++|+.... ++             .+.+.|+  .+|
T Consensus        77 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~--~sK  152 (345)
T 2bll_A           77 IATPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS--VSK  152 (345)
T ss_dssp             CCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH--HHH
T ss_pred             ccCcc-chhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccH--HHH
Confidence            75310 00122344678899999999998854 6 89999999999874321 11             1223555  556


Q ss_pred             HHHHHHHH----hcCCCEEEEEcccccCCCCCCc----------chHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          226 KMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSY----------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       226 ~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..+|.+++    +.|++++++||+.+ ||+....          .+..++.....+.....+++++..++|+|++|+|++
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  231 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNW-MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA  231 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSE-ECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcc-cCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHH
Confidence            66676653    46999999999955 7887431          234455544545566677888889999999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++++.  ..+++||+++++      ..+++.|+++.+++
T Consensus       232 ~~~~~~~~~~~~~g~~~~i~~~~------~~~s~~e~~~~i~~  268 (345)
T 2bll_A          232 LYRIIENAGNRCDGEIINIGNPE------NEASIEELGEMLLA  268 (345)
T ss_dssp             HHHHHHCGGGTTTTEEEEECCTT------SEEEHHHHHHHHHH
T ss_pred             HHHHHhhccccCCCceEEeCCCC------CCCCHHHHHHHHHH
Confidence            999998764  457899999851      27999999998864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.98  E-value=2.3e-32  Score=248.02  Aligned_cols=235  Identities=16%  Similarity=0.211  Sum_probs=175.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      ||+||||||+||||++++++|+++|++|++++|+........    ..+++++.+|++|+++++ ++++  ++|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~~~-~~~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI----TEGAKFYNGDLRDKAFLR-DVFTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS----CTTSEEEECCTTCHHHHH-HHHHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc----CCCcEEEECCCCCHHHHH-HHHhhcCCCEEEECC
Confidence            368999999999999999999999999999999764432211    237889999999999998 7887  899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~  231 (333)
                      +..... .........+++|+.++.+++++++ .++++||++||.++|+..       +.+..+.+.|+  .+|..+|.+
T Consensus        76 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~  152 (330)
T 2c20_A           76 ADSLVG-VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG--ETKLAIEKM  152 (330)
T ss_dssp             CCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH--HHHHHHHHH
T ss_pred             cccCcc-ccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH--HHHHHHHHH
Confidence            975311 0112334577899999999999885 488999999999998742       22334456666  556666666


Q ss_pred             HHh----cCCCEEEEEcccccCCCCC-----------CcchHHHHHHhhcc-cceeecC------CCCcccccccHHHHH
Q 019935          232 VQK----SGLPFTIIRAGRLTDGPYT-----------SYDLNTLLKATAGE-RRAVLMG------QGDKLIGEVSRIVVA  289 (333)
Q Consensus       232 l~~----~gi~~~~vrpg~~~~g~~~-----------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~v~Dva  289 (333)
                      ++.    .|++++++||+.+ ||+..           ......+.....+. ..+.+++      +++..++|+|++|+|
T Consensus       153 ~~~~~~~~~~~~~ilrp~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva  231 (330)
T 2c20_A          153 LHWYSQASNLRYKIFRYFNV-AGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV  231 (330)
T ss_dssp             HHHHHHTSSCEEEEEECSEE-ECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHH
T ss_pred             HHHHHHHhCCcEEEEecCcc-cCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHH
Confidence            543    5999999999955 77752           11133333433332 3344554      677889999999999


Q ss_pred             HHHHHhccCccc--CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          290 EACIQALDIEFT--EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       290 ~a~~~~l~~~~~--~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++.+++++..  .+++||++++       +.+++.|+++.+++
T Consensus       232 ~a~~~~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  269 (330)
T 2c20_A          232 AAHFLGLKDLQNGGESDFYNLGNG-------NGFSVKEIVDAVRE  269 (330)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCT-------TCBCHHHHHHHHHH
T ss_pred             HHHHHHHhccccCCCCCeEEeCCC-------CCccHHHHHHHHHH
Confidence            999999987542  3689999985       67899999998864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.98  E-value=6.1e-32  Score=244.00  Aligned_cols=227  Identities=15%  Similarity=0.116  Sum_probs=171.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      .++++|||||||||||++|+++|+++|++|++++|+...    ...+.......+++++.+|++           ++|+|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------~~d~v   73 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------DVRLV   73 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------TEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------cCCEE
Confidence            456899999999999999999999999999999998752    222111111233444445543           79999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~  227 (333)
                      ||+|+..... ..+......++ |+.++.+++++++. ++++|||+||.++|+..       +.+..+.+.|+  .+|..
T Consensus        74 i~~a~~~~~~-~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~--~sK~~  149 (321)
T 3vps_A           74 YHLASHKSVP-RSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYA--ASKVG  149 (321)
T ss_dssp             EECCCCCCHH-HHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHH
T ss_pred             EECCccCChH-HHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhH--HHHHH
Confidence            9999976421 12334455777 99999999998855 88999999999998753       23444556676  55666


Q ss_pred             HHHHHHh----cCC-CEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          228 GEDFVQK----SGL-PFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       228 ~e~~l~~----~gi-~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      +|++++.    .|+ +++++||+.+ ||+....  .+..+...+..+.....+++++..++|+|++|+|++++.++.++.
T Consensus       150 ~E~~~~~~~~~~~~~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~  228 (321)
T 3vps_A          150 LEMVAGAHQRASVAPEVGIVRFFNV-YGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL  228 (321)
T ss_dssp             HHHHHHHHHHSSSSCEEEEEEECEE-ECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC
T ss_pred             HHHHHHHHHHHcCCCceEEEEeccc-cCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC
Confidence            6666654    689 9999999955 7887542  355566666666677778889999999999999999999999876


Q ss_pred             cCCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          301 TEGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       301 ~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      . | +||+++|       +.++|.|+++.++
T Consensus       229 ~-g-~~~i~~~-------~~~s~~e~~~~i~  250 (321)
T 3vps_A          229 P-S-VVNFGSG-------QSLSVNDVIRILQ  250 (321)
T ss_dssp             C-S-EEEESCS-------CCEEHHHHHHHHH
T ss_pred             C-C-eEEecCC-------CcccHHHHHHHHH
Confidence            5 6 9999985       7799999999886

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.98  E-value=1.3e-31  Score=229.28  Aligned_cols=204  Identities=17%  Similarity=0.268  Sum_probs=165.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+||||||+|+||++++++|+++|++|++++|++++...      ..+++++.+|++| ++++. ++++++|+||||||.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~~~~~D~~d~~~~~~-~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ------YNNVKAVHFDVDWTPEEMA-KQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC------CTTEEEEECCTTSCHHHHH-TTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh------cCCceEEEecccCCHHHHH-HHHcCCCEEEECCcC
Confidence            479999999999999999999999999999999876543      2579999999999 88998 889999999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC---CccchhhhHHHHHHHHHHHHH-HhcC
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL---PWSIMNLFGVLKYKKMGEDFV-QKSG  236 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~---~~~~~~~~~~~k~k~~~e~~l-~~~g  236 (333)
                      ..         ...+++|+.++.++++++++ ++++||++||.+++.....   +..+.+.  |..+|..+|+++ +..|
T Consensus        74 ~~---------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~--Y~~sK~~~e~~~~~~~~  142 (219)
T 3dqp_A           74 GG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKD--YYIAKHFADLYLTKETN  142 (219)
T ss_dssp             TT---------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHH--HHHHHHHHHHHHHHSCC
T ss_pred             CC---------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccH--HHHHHHHHHHHHHhccC
Confidence            53         33788999999999998854 8899999999988763211   1112334  457788899999 7889


Q ss_pred             CCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCC
Q 019935          237 LPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGP  316 (333)
Q Consensus       237 i~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~  316 (333)
                      ++++++|||.+ +|+.....              ..+  ++..+++++++|+|++++.++.++...+++|++++|     
T Consensus       143 i~~~ilrp~~v-~g~~~~~~--------------~~~--~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g-----  200 (219)
T 3dqp_A          143 LDYTIIQPGAL-TEEEATGL--------------IDI--NDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNG-----  200 (219)
T ss_dssp             CEEEEEEECSE-ECSCCCSE--------------EEE--SSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEEC-----
T ss_pred             CcEEEEeCceE-ecCCCCCc--------------ccc--CCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCC-----
Confidence            99999999966 56543211              112  367789999999999999999998777999999884     


Q ss_pred             CCCcccHHHHHHH
Q 019935          317 GSDPQKWRELFKA  329 (333)
Q Consensus       317 ~~~~~s~~e~~~~  329 (333)
                         ..+++|+++.
T Consensus       201 ---~~~~~e~~~~  210 (219)
T 3dqp_A          201 ---KTAIKEALES  210 (219)
T ss_dssp             ---SEEHHHHHHT
T ss_pred             ---CccHHHHHHH
Confidence               4889988764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.98  E-value=2.7e-31  Score=241.83  Aligned_cols=236  Identities=17%  Similarity=0.151  Sum_probs=174.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEE-EccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVC-KGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v-~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      .++++||||||+||||++++++|+++|++|++++|+.++...+....   ...+++++ .+|++|+++++ ++++++|+|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~-~~~~~~d~v   87 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYD-EVIKGAAGV   87 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTT-TTTTTCSEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHH-HHHcCCCEE
Confidence            45689999999999999999999999999999999876654432211   02578888 89999999999 889999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC--CCCCeEEEEeccccccCCC-----C-----------------
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKFNE-----L-----------------  211 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~--~~~~~~v~~SS~~~~~~~~-----~-----------------  211 (333)
                      ||||+.....    .+....+++|+.++.+++++++  .++++||++||.++|+...     .                 
T Consensus        88 ih~A~~~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           88 AHIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEeCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            9999976421    2334577899999999999874  3789999999999875321     1                 


Q ss_pred             -----CccchhhhHHHHHHHHHHHHHHh----c--CCCEEEEEcccccCCCCCCc-----chHHHHHHhhcccceeecCC
Q 019935          212 -----PWSIMNLFGVLKYKKMGEDFVQK----S--GLPFTIIRAGRLTDGPYTSY-----DLNTLLKATAGERRAVLMGQ  275 (333)
Q Consensus       212 -----~~~~~~~~~~~k~k~~~e~~l~~----~--gi~~~~vrpg~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~  275 (333)
                           +..+.+.|+  .+|..+|.+++.    .  +++++++||+.+ +|+....     ....++..+..+.....+++
T Consensus       164 ~~~~~~~~~~~~Y~--~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T 1y1p_A          164 LPESDPQKSLWVYA--ASKTEAELAAWKFMDENKPHFTLNAVLPNYT-IGTIFDPETQSGSTSGWMMSLFNGEVSPALAL  240 (342)
T ss_dssp             SCTTSTTHHHHHHH--HHHHHHHHHHHHHHHHHCCSSEEEEEEESEE-ECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred             ccccccccchHHHH--HHHHHHHHHHHHHHHhcCCCceEEEEcCCce-ECCCCCCCCCCccHHHHHHHHHcCCCcccccc
Confidence                 112334555  556666665543    2  789999999955 7886532     34455555444444444444


Q ss_pred             CCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      + ..++|+|++|+|++++.++.++...|+.+...+        ..++|.|+++.+++
T Consensus       241 ~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g--------~~~s~~e~~~~i~~  288 (342)
T 1y1p_A          241 M-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTA--------GTFDWNTVLATFRK  288 (342)
T ss_dssp             C-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECC--------EEECHHHHHHHHHH
T ss_pred             C-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeC--------CCCCHHHHHHHHHH
Confidence            4 677999999999999999987655566554443        56899999998875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.98  E-value=2.5e-32  Score=245.91  Aligned_cols=231  Identities=21%  Similarity=0.214  Sum_probs=173.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+++|++|++++|.........    ..+++++.+|++|+++++ ++++  ++|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~~~~~~~-~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV----PKGVPFFRVDLRDKEGVE-RAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS----CTTCCEECCCTTCHHHHH-HHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc----ccCeEEEECCCCCHHHHH-HHHHhcCCCEEEECcc
Confidence            47999999999999999999999999999998543221111    246788999999999888 7777  8999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEecc-ccccC-C-------CCCccchhhhHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV-GVTKF-N-------ELPWSIMNLFGVLKYKKMGED  230 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~-~~~~~-~-------~~~~~~~~~~~~~k~k~~~e~  230 (333)
                      ..... ..+.+....+++|+.++.+++++++ .++++||++||. ++|+. .       +.+..+.+.|+.  +|..+|.
T Consensus        76 ~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~--sK~~~e~  152 (311)
T 2p5y_A           76 QASVK-VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAA--SKAAFEH  152 (311)
T ss_dssp             CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHH--HHHHHHH
T ss_pred             ccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHH--HHHHHHH
Confidence            75311 1122334578899999999999885 478999999999 77763 1       122234556764  4555665


Q ss_pred             HHH----hcCCCEEEEEcccccCCCCCCc-----chHHHHHHhhcccceeec-----CCCCcccccccHHHHHHHHHHhc
Q 019935          231 FVQ----KSGLPFTIIRAGRLTDGPYTSY-----DLNTLLKATAGERRAVLM-----GQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       231 ~l~----~~gi~~~~vrpg~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +++    +.|++++++||+.+ |||....     .+..+...+..+.....+     +++...++|+|++|+|++++.++
T Consensus       153 ~~~~~~~~~~~~~~~lrp~~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~  231 (311)
T 2p5y_A          153 YLSVYGQSYGLKWVSLRYGNV-YGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALAL  231 (311)
T ss_dssp             HHHHHHHHHCCCEEEEEECEE-ECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEEeeccc-cCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHH
Confidence            553    46999999999955 8887532     133444444444445555     77888899999999999999999


Q ss_pred             cCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++   +++||+++|       ...++.|+++.+++
T Consensus       232 ~~~---~~~~~i~~~-------~~~s~~e~~~~i~~  257 (311)
T 2p5y_A          232 FSL---EGIYNVGTG-------EGHTTREVLMAVAE  257 (311)
T ss_dssp             HHC---CEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             hCC---CCEEEeCCC-------CCccHHHHHHHHHH
Confidence            874   789999985       67899999998864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=6.9e-32  Score=245.38  Aligned_cols=239  Identities=18%  Similarity=0.131  Sum_probs=176.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~v  155 (333)
                      .++++||||||+||||++|+++|+++|++|++++|+..+..  .+.......+++++.+|++|++++. +++++  +|+|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~V   90 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ-RAVIKAQPQEV   90 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH-HHHHHHCCSEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHH-HHHHHcCCCEE
Confidence            45679999999999999999999999999999999865421  1111101457899999999999988 77774  6999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccCC-------CCCccchhhhHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~  226 (333)
                      ||+||..... ..+......+++|+.++.+++++++. ++ ++||++||.++|+..       +.+..+.+.|+  .+|.
T Consensus        91 ih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~sK~  167 (335)
T 1rpn_A           91 YNLAAQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYG--VAKL  167 (335)
T ss_dssp             EECCSCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHH
T ss_pred             EECccccchh-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhH--HHHH
Confidence            9999975311 11233445788999999999998854 75 899999999998743       22334455666  4555


Q ss_pred             HHHHHHH----hcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          227 MGEDFVQ----KSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       227 ~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      .+|.+++    +.|++++++||+.+ |||.....     +..++.....+ .....+++++..++|+|++|+|++++.++
T Consensus       168 ~~e~~~~~~~~~~~~~~~i~r~~~v-~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~  246 (335)
T 1rpn_A          168 YGHWITVNYRESFGLHASSGILFNH-ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLML  246 (335)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCcEEEEeeCcc-cCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHH
Confidence            5666654    35999999999955 78864322     22333333323 23446788889999999999999999999


Q ss_pred             cCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.  +++||++++       ..++|.|+++.+++
T Consensus       247 ~~~~--~~~~ni~~~-------~~~s~~e~~~~i~~  273 (335)
T 1rpn_A          247 QQDK--ADDYVVATG-------VTTTVRDMCQIAFE  273 (335)
T ss_dssp             HSSS--CCCEEECCS-------CEEEHHHHHHHHHH
T ss_pred             hcCC--CCEEEEeCC-------CCccHHHHHHHHHH
Confidence            8764  478999985       77999999999875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.97  E-value=9.3e-32  Score=247.03  Aligned_cols=237  Identities=16%  Similarity=0.192  Sum_probs=178.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |+||||||+||||++|+++|++. |++|++++|+.  ...+.+.......+++++.+|++|++++. ++++  ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEIT-RIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH-HHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHH-HHHhhcCCCEEEE
Confidence            37999999999999999999998 79999999975  22223222111457899999999999998 7887  8999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-C--CCC-------eEEEEeccccccCCC-----------------
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S--SLK-------RIVLVSSVGVTKFNE-----------------  210 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~-------~~v~~SS~~~~~~~~-----------------  210 (333)
                      |||..... .........+++|+.++.+++++++ .  +++       +||++||.++|+...                 
T Consensus        80 ~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           80 LAAESHVD-RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             CCSCCCHH-HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             CCCCcChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            99975310 1112345578999999999999874 3  666       999999999887432                 


Q ss_pred             CCccchhhhHHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCccccccc
Q 019935          211 LPWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       211 ~~~~~~~~~~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      .+..+.+.|+  .+|..+|.+++    +.|++++++||+.+ ||+...  ..+..+......+.....++++...++++|
T Consensus       159 ~~~~~~~~Y~--~sK~~~e~~~~~~~~~~gi~~~~vrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  235 (361)
T 1kew_A          159 TAYAPSSPYS--ASKASSDHLVRAWRRTYGLPTIVTNCSNN-YGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY  235 (361)
T ss_dssp             SCCCCCSHHH--HHHHHHHHHHHHHHHHHCCCEEEEEECEE-ESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred             CCCCCCCccH--HHHHHHHHHHHHHHHHhCCcEEEEeecee-ECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEE
Confidence            1334456666  44555665554    35999999999955 788753  224445544444555666788888999999


Q ss_pred             HHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++++.+++++ ..|++||+++|       ..+++.|+++.+++
T Consensus       236 v~Dva~a~~~~~~~~-~~g~~~~v~~~-------~~~s~~e~~~~i~~  275 (361)
T 1kew_A          236 VEDHARALHMVVTEG-KAGETYNIGGH-------NEKKNLDVVFTICD  275 (361)
T ss_dssp             HHHHHHHHHHHHHHC-CTTCEEEECCC-------CEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CCCCEEEecCC-------CeeeHHHHHHHHHH
Confidence            999999999999765 35789999985       67999999998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=1.5e-31  Score=243.22  Aligned_cols=232  Identities=16%  Similarity=0.135  Sum_probs=174.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHV  155 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~v  155 (333)
                      ....+|+||||||+||||++++++|+++|++|++++|+..........  ..+++++.+|++|+++++ +++++  +|+|
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~--~~~~~~~~~Dl~d~~~~~-~~~~~~~~D~v   93 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD--HPNLTFVEGSIADHALVN-QLIGDLQPDAV   93 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC--CTTEEEEECCTTCHHHHH-HHHHHHCCSEE
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh--cCCceEEEEeCCCHHHHH-HHHhccCCcEE
Confidence            345678999999999999999999999999999999986443222211  157899999999999998 78887  9999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEecccccc----CCCCCc----cch-hhhHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK----FNELPW----SIM-NLFGVLKYK  225 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~----~~~~~~----~~~-~~~~~~k~k  225 (333)
                      |||||.....  ...+..  +++|+.++.+++++++ .++++||++||.++|+    ....++    .+. +.|+  .+|
T Consensus        94 ih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~--~sK  167 (333)
T 2q1w_A           94 VHTAASYKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYA--ISK  167 (333)
T ss_dssp             EECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHH--HHH
T ss_pred             EECceecCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchH--HHH
Confidence            9999976421  111111  7899999999999874 4889999999999987    322111    233 4555  667


Q ss_pred             HHHHHHHHh-cCCCEEEEEcccccCCCCCC-cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCC
Q 019935          226 KMGEDFVQK-SGLPFTIIRAGRLTDGPYTS-YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG  303 (333)
Q Consensus       226 ~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g  303 (333)
                      ..+|.+++. .. +++++||+.+ ||+... ..+..++.....+.  ..++ ++..+++++++|+|++++.+++++.  +
T Consensus       168 ~~~E~~~~~s~~-~~~ilR~~~v-~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~--g  240 (333)
T 2q1w_A          168 SANEDYLEYSGL-DFVTFRLANV-VGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG--H  240 (333)
T ss_dssp             HHHHHHHHHHTC-CEEEEEESEE-ESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC--C
T ss_pred             HHHHHHHHhhhC-CeEEEeeceE-ECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC--C
Confidence            789999888 66 9999999955 787732 22444544443333  3344 6678899999999999999998865  8


Q ss_pred             cEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          304 EIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       304 ~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|++++|       ..++|.|+++.+++
T Consensus       241 ~~~~v~~~-------~~~s~~e~~~~i~~  262 (333)
T 2q1w_A          241 GAYHFSSG-------TDVAIKELYDAVVE  262 (333)
T ss_dssp             EEEECSCS-------CCEEHHHHHHHHHH
T ss_pred             CEEEeCCC-------CCccHHHHHHHHHH
Confidence            89999985       67999999998864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=3.5e-32  Score=249.62  Aligned_cols=241  Identities=14%  Similarity=0.109  Sum_probs=178.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcC--CcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~  157 (333)
                      .+|+||||||+||||++|+++|+++|++|++++|+..+...+.... ...+++++.+|++|++++. +++++  +|+|||
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~vih   86 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLL-ESIREFQPEIVFH   86 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHH-HHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHH-HHHHhcCCCEEEE
Confidence            4579999999999999999999999999999999876544332111 1457899999999999988 77775  899999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCC--------CccchhhhHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNEL--------PWSIMNLFGVLKYKKM  227 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~--------~~~~~~~~~~~k~k~~  227 (333)
                      +||..... .........+++|+.++.+++++++. + +++||++||.++|+....        +..+.+.|+  .+|..
T Consensus        87 ~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~--~sK~~  163 (357)
T 1rkx_A           87 MAAQPLVR-LSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS--NSKGC  163 (357)
T ss_dssp             CCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH--HHHHH
T ss_pred             CCCCcccc-cchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccH--HHHHH
Confidence            99863210 01123345778999999999998854 4 889999999999875332        334455666  45556


Q ss_pred             HHHHHHh-------------cCCCEEEEEcccccCCCCCC---cchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          228 GEDFVQK-------------SGLPFTIIRAGRLTDGPYTS---YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       228 ~e~~l~~-------------~gi~~~~vrpg~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +|.+++.             .|++++++||+.+ ||+...   ..+..++..+..+..+ .+++++..++|+|++|+|++
T Consensus       164 ~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v-~G~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~v~v~Dva~a  241 (357)
T 1rkx_A          164 AELVTSSYRNSFFNPANYGQHGTAVATVRAGNV-IGGGDWALDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLSG  241 (357)
T ss_dssp             HHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCE-ECTTCCCSSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhccccCCceEEEEeecee-eCCCCCccccHHHHHHHHHhcCCCE-EECCCCCeeccEeHHHHHHH
Confidence            6665543             2999999999955 788652   2345555555444433 44566788999999999999


Q ss_pred             HHHhccC----cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDI----EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~----~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.++..    +...+++||+++|.+     ..++|.|+++.+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~ni~~~~~-----~~~s~~e~~~~i~~  281 (357)
T 1rkx_A          242 YLLLAQKLYTDGAEYAEGWNFGPNDA-----DATPVKNIVEQMVK  281 (357)
T ss_dssp             HHHHHHHHHHTCGGGCSEEECCCCGG-----GCEEHHHHHHHHHH
T ss_pred             HHHHHHhhhhcCCCCCceEEECCCCC-----CcccHHHHHHHHHH
Confidence            9999874    224578999997421     57899999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=248.03  Aligned_cols=229  Identities=19%  Similarity=0.139  Sum_probs=172.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~  157 (333)
                      +++|+||||||+||||++|+++|+++|+      +....         ...++++.+|++|++.+. +++++  +|+|||
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------~~~~~~~~~D~~d~~~~~-~~~~~~~~d~Vih   67 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------WVFVSSKDADLTDTAQTR-ALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------EEECCTTTCCTTSHHHHH-HHHHHSCCSEEEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------ccccCceecccCCHHHHH-HHHhhcCCCEEEE
Confidence            4678999999999999999999999998      11100         223445679999999998 78876  999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCC-Cccch---------hhhHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL-PWSIM---------NLFGVLKYKK  226 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~-~~~~~---------~~~~~~k~k~  226 (333)
                      +|+...........+...+++|+.++.+++++++ .++++|||+||.++|+.... ++.+.         ..++|..+|.
T Consensus        68 ~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~  147 (319)
T 4b8w_A           68 LAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKR  147 (319)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHH
T ss_pred             CceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHH
Confidence            9998532112233445578999999999999885 48999999999999985332 22211         1123446676


Q ss_pred             HHHHHHH----hcCCCEEEEEcccccCCCCCCc------chHHHHHH----hhcccceeecCCCCcccccccHHHHHHHH
Q 019935          227 MGEDFVQ----KSGLPFTIIRAGRLTDGPYTSY------DLNTLLKA----TAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       227 ~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|++++    +.|++++++||+.+ ||+....      .++.++..    +..+..+..+++++..++|+|++|+|+++
T Consensus       148 ~~E~~~~~~~~~~~~~~~ilRp~~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  226 (319)
T 4b8w_A          148 MIDVQNRAYFQQYGCTFTAVIPTNV-FGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF  226 (319)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEE-ECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCEEEEeeccc-cCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence            6776654    47999999999955 7887542      23444444    45566677788999999999999999999


Q ss_pred             HHhccCcc-cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          293 IQALDIEF-TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       293 ~~~l~~~~-~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.++.++. ..+++||+++|       ..++|.|+++.+++
T Consensus       227 ~~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  260 (319)
T 4b8w_A          227 IWVLREYNEVEPIILSVGEE-------DEVSIKEAAEAVVE  260 (319)
T ss_dssp             HHHHHHCCCSSCEEECCCGG-------GCEEHHHHHHHHHH
T ss_pred             HHHHhccccCCceEEEecCC-------CceeHHHHHHHHHH
Confidence            99998843 44679999985       77999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=2e-32  Score=246.38  Aligned_cols=230  Identities=13%  Similarity=0.116  Sum_probs=174.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      +|+||||||+||||++|+++|+++  |++|++++|+..+.. +     ..+++++.+|++|+++++ ++++  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-----~~~~~~~~~D~~d~~~~~-~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-----VNSGPFEVVNALDFNQIE-HLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-----HHSSCEEECCTTCHHHHH-HHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-----cCCCceEEecCCCHHHHH-HHHhhcCCCEEEE
Confidence            478999999999999999999999  899999999865532 1     235678999999999998 7887  8999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--------CCccchhhhHHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMG  228 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--------~~~~~~~~~~~~k~k~~~  228 (333)
                      +|+.....  ........+++|+.++.+++++++. ++++|||+||.++|+...        .+..+.+.|+.  +|..+
T Consensus        75 ~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~--sK~~~  150 (312)
T 2yy7_A           75 MAALLSAT--AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGI--SKQAG  150 (312)
T ss_dssp             CCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHH--HHHHH
T ss_pred             CCccCCCc--hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHH--HHHHH
Confidence            99875310  0123345688999999999998854 889999999999987522        22344566774  45556


Q ss_pred             HHHH----HhcCCCEEEEEcccccCCCCC----C---cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          229 EDFV----QKSGLPFTIIRAGRLTDGPYT----S---YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       229 e~~l----~~~gi~~~~vrpg~~~~g~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |.++    ++.|++++++||+.+ ||+..    .   +....+...+. ......+++++..++|+|++|+|++++.+++
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  228 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYPGL-ISWSTPPGGGTTDYAVDIFYKAIA-DKKYECFLSSETKMPMMYMDDAIDATINIMK  228 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEECEE-ECSSSCCCSCTTTHHHHHHHHHHH-TSEEEESSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCcEEEEeCCeE-ecCCCCCCCchhhhHHHHHHHHHc-CCCeEEecCCCceeeeeeHHHHHHHHHHHHh
Confidence            6554    345999999999965 77542    1   11223333333 3445567778889999999999999999998


Q ss_pred             Cccc---CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          298 IEFT---EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       298 ~~~~---~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++..   .+++||+++        ...++.|+++.+++
T Consensus       229 ~~~~~~~~~~~~ni~~--------~~~s~~e~~~~i~~  258 (312)
T 2yy7_A          229 APVEKIKIHSSYNLAA--------MSFTPTEIANEIKK  258 (312)
T ss_dssp             SCGGGCCCSSCEECCS--------EEECHHHHHHHHHT
T ss_pred             CcccccccCceEEeCC--------CccCHHHHHHHHHH
Confidence            8653   248999986        56899999999875

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.97  E-value=6.2e-31  Score=247.15  Aligned_cols=237  Identities=17%  Similarity=0.208  Sum_probs=174.5

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhhcc-----------CCCCceEEEEccCCCcC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGK-----------QDEETLQVCKGDTRNPK  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~-----------~~~~~~~~v~~D~~d~~  142 (333)
                      +....+++||||||+||||++|+++|++.|++|++++|++....   .+...           ....+++++.+|++|++
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            33456789999999999999999999999999999999887321   11100           01368999999999998


Q ss_pred             CCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccC------------CC
Q 019935          143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF------------NE  210 (333)
Q Consensus       143 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~------------~~  210 (333)
                      .+.  .+.++|+|||||+....    .......+++|+.++.+++++++.++++||++||.++ +.            ++
T Consensus       144 ~l~--~~~~~d~Vih~A~~~~~----~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~  216 (427)
T 4f6c_A          144 DVV--LPENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEA  216 (427)
T ss_dssp             CCC--CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTT
T ss_pred             cCC--CcCCCCEEEECCcccCC----CCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCcccccc
Confidence            887  67899999999998642    2345668899999999999988657899999999998 32            11


Q ss_pred             CC---ccchhhhHHHHHHHHHHHHHHh---cCCCEEEEEcccccCCCCCCcc---------hHHHHHHhhcccceeecCC
Q 019935          211 LP---WSIMNLFGVLKYKKMGEDFVQK---SGLPFTIIRAGRLTDGPYTSYD---------LNTLLKATAGERRAVLMGQ  275 (333)
Q Consensus       211 ~~---~~~~~~~~~~k~k~~~e~~l~~---~gi~~~~vrpg~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~  275 (333)
                      .+   ..+.+.|+  .+|..+|.+++.   .|++++++|||.+ +|+.....         +..++........ ...+.
T Consensus       217 ~~~~~~~~~~~Y~--~sK~~~E~~~~~~~~~g~~~~ivRpg~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  292 (427)
T 4f6c_A          217 DVYKGQLLTSPYT--RSKFYSELKVLEAVNNGLDGRIVRVGNL-TSPYNGRWHMRNIKTNRFSMVMNDLLQLDC-IGVSM  292 (427)
T ss_dssp             CSCSSCCCCSHHH--HHHHHHHHHHHHHHHTTCCEEEEEECCE-ESCSSSCCCCTTGGGCHHHHHHHHHHHSSE-EEHHH
T ss_pred             ccccCCCCCCchH--HHHHHHHHHHHHHHHcCCCEEEEeCCee-ecCCCCCccccCcchHHHHHHHHHHHhcCC-CCCcc
Confidence            11   22445555  567777877765   7999999999965 77765432         3344443332322 22344


Q ss_pred             CCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++..++|++++|+|++++.++..+. .+++||++++       +.++|.|+++.+++
T Consensus       293 ~~~~~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~-------~~~s~~el~~~i~~  341 (427)
T 4f6c_A          293 AEMPVDFSFVDTTARQIVALAQVNT-PQIIYHVLSP-------NKMPVKSLLECVKR  341 (427)
T ss_dssp             HTCEECCEEHHHHHHHHHHHTTSCC-CCSEEEESCS-------CCEEHHHHHHHHHS
T ss_pred             ccceEEEeeHHHHHHHHHHHHcCCC-CCCEEEecCC-------CCCcHHHHHHHHHH
Confidence            6788999999999999999999877 7899999995       77999999999875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=2.3e-31  Score=239.92  Aligned_cols=225  Identities=16%  Similarity=0.114  Sum_probs=149.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~~  158 (333)
                      |+|+||||||+||||++++++|+++|++|++++|+...          .+  ++.+|++|++++. +++++  +|+|||+
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~--~~~~Dl~d~~~~~-~~~~~~~~d~vih~   67 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------PK--FEQVNLLDSNAVH-HIIHDFQPHVIVHC   67 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CH-HHHHHHCCSEEEEC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------CC--eEEecCCCHHHHH-HHHHhhCCCEEEEC
Confidence            35799999999999999999999999999999987543          12  6789999999998 77774  9999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC------CCCccchhhhHHHHHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN------ELPWSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~------~~~~~~~~~~~~~k~k~~~e~~  231 (333)
                      ||..... .........+++|+.++.+++++++. ++ +|||+||.++|+..      +.+..+.+.|+  .+|..+|.+
T Consensus        68 A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~  143 (315)
T 2ydy_A           68 AAERRPD-VVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYG--KTKLDGEKA  143 (315)
T ss_dssp             C--------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH--HHHHHHHHH
T ss_pred             CcccChh-hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHH--HHHHHHHHH
Confidence            9975421 12345567899999999999998854 65 99999999998752      22234445565  668889999


Q ss_pred             HHhcCCCEEEEEcccccCCCCCC---cchHHHHHHhh-cccceeecCCCCcccccccHHHHHHHHHHhccCc---ccCCc
Q 019935          232 VQKSGLPFTIIRAGRLTDGPYTS---YDLNTLLKATA-GERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE---FTEGE  304 (333)
Q Consensus       232 l~~~gi~~~~vrpg~~~~g~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~---~~~g~  304 (333)
                      ++..+++++++||+.+ +|+...   ..+..+..... .+......  ++..++++|++|+|++++.++.++   ...++
T Consensus       144 ~~~~~~~~~~lR~~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  220 (315)
T 2ydy_A          144 VLENNLGAAVLRIPIL-YGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKG  220 (315)
T ss_dssp             HHHHCTTCEEEEECSE-ECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCE
T ss_pred             HHHhCCCeEEEeeeee-eCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCC
Confidence            9999999999999966 588754   23344444443 33333332  467789999999999999999764   24578


Q ss_pred             EEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          305 IYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       305 ~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +||+++|       ..++|.|+++.+++
T Consensus       221 ~~~i~~~-------~~~s~~e~~~~i~~  241 (315)
T 2ydy_A          221 TFHWSGN-------EQMTKYEMACAIAD  241 (315)
T ss_dssp             EEECCCS-------CCBCHHHHHHHHHH
T ss_pred             eEEEcCC-------CcccHHHHHHHHHH
Confidence            9999985       67999999998864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=1.2e-31  Score=245.02  Aligned_cols=239  Identities=18%  Similarity=0.189  Sum_probs=174.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----------hhhhhccCCCCceEEEEccCCCcCCCchhhhc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----------ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----------~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~  150 (333)
                      |+|+||||||+||||++++++|+++|++|++++|+...          .+.+... ...+++++.+|++|+++++ ++++
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~-~~~~   78 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQ-RLFK   78 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHH-HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHH-HHHH
Confidence            35799999999999999999999999999999986432          1111110 1457899999999999998 7887


Q ss_pred             --CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC-------CCCccc-hhhh
Q 019935          151 --GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSI-MNLF  219 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~-------~~~~~~-~~~~  219 (333)
                        ++|+|||+|+..... .........+++|+.++.+++++++ .++++||++||.++|+..       +.+..+ .+.|
T Consensus        79 ~~~~d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y  157 (348)
T 1ek6_A           79 KYSFMAVIHFAGLKAVG-ESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY  157 (348)
T ss_dssp             HCCEEEEEECCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred             hcCCCEEEECCCCcCcc-chhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch
Confidence              899999999975311 0112334578899999999999885 478999999999998742       122233 4556


Q ss_pred             HHHHHHHHHHHHHHhc---C--CCEEEEEcccccCCCCC------------CcchHHHHHHhh-cccceeecC------C
Q 019935          220 GVLKYKKMGEDFVQKS---G--LPFTIIRAGRLTDGPYT------------SYDLNTLLKATA-GERRAVLMG------Q  275 (333)
Q Consensus       220 ~~~k~k~~~e~~l~~~---g--i~~~~vrpg~~~~g~~~------------~~~~~~~~~~~~-~~~~~~~~~------~  275 (333)
                      +  .+|..+|.+++..   +  ++++++||+.+ ||+..            ...+..+..... ....+..++      +
T Consensus       158 ~--~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v-~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  234 (348)
T 1ek6_A          158 G--KSKFFIEEMIRDLCQADKTWNAVLLRYFNP-TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED  234 (348)
T ss_dssp             H--HHHHHHHHHHHHHHHHCTTCEEEEEEECEE-ECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             H--HHHHHHHHHHHHHHhcCCCcceEEEeeccc-cCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCC
Confidence            6  5566666665432   5  99999999965 67742            112334444444 334444554      5


Q ss_pred             CCcccccccHHHHHHHHHHhccCcc-cCC-cEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIEF-TEG-EIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~~-~~g-~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++..++|+|++|+|++++.+++++. ..+ ++||++++       ..++|.|+++.+++
T Consensus       235 g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~-------~~~s~~e~~~~i~~  286 (348)
T 1ek6_A          235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-------TGYSVLQMVQAMEK  286 (348)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-------CCEEHHHHHHHHHH
T ss_pred             CceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCC-------CCccHHHHHHHHHH
Confidence            6788999999999999999998753 334 89999985       67899999998874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=3.8e-31  Score=230.62  Aligned_cols=228  Identities=27%  Similarity=0.412  Sum_probs=171.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|+||||||+|+||++++++|+++  |++|++++|++++.+.+     ..+++++.+|++|+++++ ++++++|+||||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~-~~~~~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSIN-PAFQGIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHH-HHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHH-HHHcCCCEEEEe
Confidence            4679999999999999999999999  89999999998766544     346788999999999999 889999999999


Q ss_pred             CCCCCC------------CCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhH---HH
Q 019935          159 TGTTAF------------PSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFG---VL  222 (333)
Q Consensus       159 a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~---~~  222 (333)
                      ||....            +...++.....+++|+.++.+++++++. ++++||++||.+++..    ..+...|+   |.
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~----~~~~~~~~~~~y~  152 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP----DHPLNKLGNGNIL  152 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT----TCGGGGGGGCCHH
T ss_pred             ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC----CCccccccchhHH
Confidence            997531            1111222234578999999999998854 8899999999988642    12223332   55


Q ss_pred             HHHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          223 KYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       223 k~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                      .+|..+|.++++.|++++++|||.+ +|+..... .    ... ......++   ...++++++|+|++++++++++...
T Consensus       153 ~sK~~~e~~~~~~~i~~~~vrpg~v-~~~~~~~~-~----~~~-~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~~  222 (253)
T 1xq6_A          153 VWKRKAEQYLADSGTPYTIIRAGGL-LDKEGGVR-E----LLV-GKDDELLQ---TDTKTVPRADVAEVCIQALLFEEAK  222 (253)
T ss_dssp             HHHHHHHHHHHTSSSCEEEEEECEE-ECSCSSSS-C----EEE-ESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGGT
T ss_pred             HHHHHHHHHHHhCCCceEEEeccee-ecCCcchh-h----hhc-cCCcCCcC---CCCcEEcHHHHHHHHHHHHcCcccc
Confidence            6788899999999999999999955 67654311 0    000 00001111   1346999999999999999987666


Q ss_pred             CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          303 GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       303 g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++|++++++.    ...+++.|+++.+++
T Consensus       223 g~~~~i~~~~~----~~~~s~~e~~~~~~~  248 (253)
T 1xq6_A          223 NKAFDLGSKPE----GTSTPTKDFKALFSQ  248 (253)
T ss_dssp             TEEEEEEECCT----TTSCCCCCHHHHHHT
T ss_pred             CCEEEecCCCc----CCCCCHHHHHHHHHH
Confidence            88999998531    035789999988875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.97  E-value=1.3e-31  Score=245.90  Aligned_cols=232  Identities=13%  Similarity=0.097  Sum_probs=172.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-----CC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----~~  152 (333)
                      .+++|+||||||+||||++|+++|+++| ++|++++|+...... ..   ..++. +.+|++|++.++ .+++     ++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~---~~~~~-~~~d~~~~~~~~-~~~~~~~~~~~  116 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---LVDLN-IADYMDKEDFLI-QIMAGEEFGDV  116 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-GG---TTTSC-CSEEEEHHHHHH-HHHTTCCCSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-hc---ccCce-EeeecCcHHHHH-HHHhhcccCCC
Confidence            4456889999999999999999999999 999999998654311 10   11233 678999888887 6766     59


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC-------CccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL-------PWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~-------~~~~~~~~~~~k~  224 (333)
                      |+|||+|+....   ........+++|+.++.+++++++. ++ +||++||.++|+....       +..+.+.|+  .+
T Consensus       117 d~Vih~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~s  190 (357)
T 2x6t_A          117 EAIFHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFG--YS  190 (357)
T ss_dssp             CEEEECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHH--HH
T ss_pred             CEEEECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhH--HH
Confidence            999999997642   1233345788999999999998854 78 9999999999874321       223345566  55


Q ss_pred             HHHHHHHHH----hcCCCEEEEEcccccCCCCCC------cchHHHHHHhhcccceeecCCCCc-ccccccHHHHHHHHH
Q 019935          225 KKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTS------YDLNTLLKATAGERRAVLMGQGDK-LIGEVSRIVVAEACI  293 (333)
Q Consensus       225 k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a~~  293 (333)
                      |..+|.+++    +.|++++++||+.+ ||+...      ..+..+...+..+.....+++++. .++|++++|+|++++
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~  269 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNV-YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNL  269 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEE-ESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeE-ECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHH
Confidence            666776654    35899999999955 788653      224445555555555556777888 899999999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+++++.  +++||+++|       ..++|.|+++.+++
T Consensus       270 ~~~~~~~--~~~~~i~~~-------~~~s~~e~~~~i~~  299 (357)
T 2x6t_A          270 WFLENGV--SGIFNLGTG-------RAESFQAVADATLA  299 (357)
T ss_dssp             HHHHHCC--CEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             HHHhcCC--CCeEEecCC-------CcccHHHHHHHHHH
Confidence            9998765  789999985       67999999998864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=8.2e-32  Score=239.74  Aligned_cols=214  Identities=16%  Similarity=0.217  Sum_probs=173.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+++|++|++++|.                   .+|++|++.+. ++++  ++|+|||+|+
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~-~~~~~~~~d~vi~~a~   65 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQ-QVVQEIRPHIIIHCAA   65 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHH-HHHHHHCCSEEEECCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHH-HHHHhcCCCEEEECCc
Confidence            489999999999999999999999999999992                   37999999998 7777  7999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ..... ..+......+++|+.++.+++++++. ++ ||||+||.++|+..       +.+..+.+.|+  .+|..+|+++
T Consensus        66 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~  141 (287)
T 3sc6_A           66 YTKVD-QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYG--ASKYAGEQFV  141 (287)
T ss_dssp             CCCHH-HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHH--HHHHHHHHHH
T ss_pred             ccChH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHH
Confidence            86421 11234456789999999999998865 66 79999999998743       23344555666  6678899999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCC
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      +..+.+++++||+.+ ||+.....+..+......+.....++  +..++|+|++|+|++++.++.++.  +++||++++ 
T Consensus       142 ~~~~~~~~ilR~~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~--~~~~~i~~~-  215 (287)
T 3sc6_A          142 KELHNKYFIVRTSWL-YGKYGNNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL--YGTYHVSNT-  215 (287)
T ss_dssp             HHHCSSEEEEEECSE-ECSSSCCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC--CEEEECCCB-
T ss_pred             HHhCCCcEEEeeeee-cCCCCCcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC--CCeEEEcCC-
Confidence            998889999999955 78876555666666666555555554  478899999999999999999876  679999995 


Q ss_pred             CCCCCCCcccHHHHHHHHhc
Q 019935          313 GEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       313 ~~~~~~~~~s~~e~~~~i~~  332 (333)
                            ...+|.|+++.+++
T Consensus       216 ------~~~s~~e~~~~i~~  229 (287)
T 3sc6_A          216 ------GSCSWFEFAKKIFS  229 (287)
T ss_dssp             ------SCEEHHHHHHHHHH
T ss_pred             ------CcccHHHHHHHHHH
Confidence                  67999999998875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.97  E-value=2e-31  Score=243.54  Aligned_cols=231  Identities=19%  Similarity=0.245  Sum_probs=179.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +++|+||||||+|+||++++++|+++ |+ +|++++|++.+...+.......+++++.+|++|.+++. ++++++|+|||
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~-~~~~~~D~Vih   97 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLN-YALEGVDICIH   97 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHH-HHTTTCSEEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHH-HHHhcCCEEEE
Confidence            45789999999999999999999999 97 99999999877655543332468999999999999998 88999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHh--
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK--  234 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~--  234 (333)
                      +||....+.. ...+...+++|+.|+.++++++. .++++||++||..++.       +.+.|+  .+|..+|.+++.  
T Consensus        98 ~Aa~~~~~~~-~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~-------p~~~Y~--~sK~~~E~~~~~~~  167 (344)
T 2gn4_A           98 AAALKHVPIA-EYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN-------PINLYG--ATKLCSDKLFVSAN  167 (344)
T ss_dssp             CCCCCCHHHH-HHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS-------CCSHHH--HHHHHHHHHHHHGG
T ss_pred             CCCCCCCCch-hcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC-------CccHHH--HHHHHHHHHHHHHH
Confidence            9997642111 11224578899999999999874 5899999999987753       335666  556667777654  


Q ss_pred             -----cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          235 -----SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       235 -----~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                           .|++++++|||++ +|+.+. .++.+.+.+..+.....+.+++..++|+|++|+|++++.+++++. .|++|++.
T Consensus       168 ~~~~~~g~~~~~vRpg~v-~g~~~~-~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~-~g~~~~~~  244 (344)
T 2gn4_A          168 NFKGSSQTQFSVVRYGNV-VGSRGS-VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMH-GGEIFVPK  244 (344)
T ss_dssp             GCCCSSCCEEEEECCCEE-TTCTTS-HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCC-SSCEEEEC
T ss_pred             HHhCCCCcEEEEEEeccE-ECCCCC-HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhcc-CCCEEecC
Confidence                 4799999999965 787754 245555555444412333467778899999999999999998753 57899987


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +        ...++.|+++.+.+
T Consensus       245 ~--------~~~s~~el~~~i~~  259 (344)
T 2gn4_A          245 I--------PSMKMTDLAKALAP  259 (344)
T ss_dssp             C--------CEEEHHHHHHHHCT
T ss_pred             C--------CcEEHHHHHHHHHH
Confidence            6        45899999999864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=4.7e-31  Score=234.75  Aligned_cols=212  Identities=23%  Similarity=0.318  Sum_probs=168.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+++  |++|++++|++++...+.    ..+++++.+|++|++++. ++++++|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~d~~~l~-~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPESLQ-KAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----HTTCEEEECCTTCHHHHH-HHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----hcCCeEEEeccCCHHHHH-HHHhcCCEEEEcCC
Confidence            47999999999999999999999  999999999887665543    347889999999999999 88999999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCE
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF  239 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~  239 (333)
                      ...      .     .++|+.++.+++++++ .++++||++||.+++..   +    ..|  ...|..+|+++++.|+++
T Consensus        76 ~~~------~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---~----~~y--~~~K~~~E~~~~~~~~~~  135 (287)
T 2jl1_A           76 PHY------D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---I----IPL--AHVHLATEYAIRTTNIPY  135 (287)
T ss_dssp             CCS------C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---C----STH--HHHHHHHHHHHHHTTCCE
T ss_pred             CCc------C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---C----Cch--HHHHHHHHHHHHHcCCCe
Confidence            521      1     1679999999999885 48999999999988631   1    234  477888999999999999


Q ss_pred             EEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCC
Q 019935          240 TIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSD  319 (333)
Q Consensus       240 ~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~  319 (333)
                      +++||+.+ +++.....+   ......+ .. .++.++..++|++++|+|++++.+++++...+++||++++       .
T Consensus       136 ~ilrp~~~-~~~~~~~~~---~~~~~~~-~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-------~  202 (287)
T 2jl1_A          136 TFLRNALY-TDFFVNEGL---RASTESG-AI-VTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSN-------Q  202 (287)
T ss_dssp             EEEEECCB-HHHHSSGGG---HHHHHHT-EE-EESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCS-------S
T ss_pred             EEEECCEe-ccccchhhH---HHHhhCC-ce-eccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCC-------C
Confidence            99999954 444311111   1222222 22 2455677889999999999999999986666889999985       6


Q ss_pred             cccHHHHHHHHhc
Q 019935          320 PQKWRELFKAAKA  332 (333)
Q Consensus       320 ~~s~~e~~~~i~~  332 (333)
                      ..++.|+++.+++
T Consensus       203 ~~s~~e~~~~i~~  215 (287)
T 2jl1_A          203 PWTFDELAQILSE  215 (287)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH
Confidence            7899999998864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=1.1e-31  Score=242.73  Aligned_cols=222  Identities=14%  Similarity=0.118  Sum_probs=169.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      +|+||||||+||||++|+++|+++|++|++++|+.                  .+|++|++++. ++++  ++|+|||+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~-~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVH-DFFASERIDQVYLAA   63 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHH-HHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHH-HHHHhcCCCEEEEcC
Confidence            47899999999999999999999999999988752                  36999998888 7888  999999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCC-C----------Cccc-hhhhHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-L----------PWSI-MNLFGVLKYKK  226 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~-~----------~~~~-~~~~~~~k~k~  226 (333)
                      +...............+++|+.++.+++++++ .++++|||+||.++|+... .          +..+ .+.|+  .+|.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~--~sK~  141 (321)
T 1e6u_A           64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA--IAKI  141 (321)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH--HHHH
T ss_pred             eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH--HHHH
Confidence            97531100112334567899999999999885 4889999999999997432 1          1122 13555  5666


Q ss_pred             HHHHHHHh----cCCCEEEEEcccccCCCCCC------cchHHHHHHhhc----c-cceeecCCCCcccccccHHHHHHH
Q 019935          227 MGEDFVQK----SGLPFTIIRAGRLTDGPYTS------YDLNTLLKATAG----E-RRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       227 ~~e~~l~~----~gi~~~~vrpg~~~~g~~~~------~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .+|.+++.    .|++++++||+.+ ||+...      ..+..++..+..    + ..+..+++++..++|+|++|+|++
T Consensus       142 ~~E~~~~~~~~~~~~~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~  220 (321)
T 1e6u_A          142 AGIKLCESYNRQYGRDYRSVMPTNL-YGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEE-ESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeCCc-CCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence            67766654    5999999999955 788754      224445444432    1 355567888899999999999999


Q ss_pred             HHHhccCcccC--------CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTE--------GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~--------g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++++...        +++||++++       ..++|.|+++.+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~-------~~~s~~e~~~~i~~  262 (321)
T 1e6u_A          221 SIHVMELAHEVWLENTQPMLSHINVGTG-------VDCTIRELAQTIAK  262 (321)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEESCS-------CCEEHHHHHHHHHH
T ss_pred             HHHHHhCcccccccccccCCceEEeCCC-------CCccHHHHHHHHHH
Confidence            99999886542        689999985       67999999998864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=3.2e-31  Score=246.60  Aligned_cols=238  Identities=21%  Similarity=0.223  Sum_probs=171.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcch---------hhhhh---ccCC----CCc---eEEEEccCCCcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEK---------ATTLF---GKQD----EET---LQVCKGDTRNPK  142 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~---------~~~~~---~~~~----~~~---~~~v~~D~~d~~  142 (333)
                      |+||||||+||||++|+++|+ ++|++|++++|+...         .+.+.   ....    ..+   ++++.+|++|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            589999999999999999999 999999999997543         22221   1110    124   889999999999


Q ss_pred             CCchhhhc--C-CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCC--------
Q 019935          143 DLDPAIFE--G-VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE--------  210 (333)
Q Consensus       143 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~--------  210 (333)
                      ++. ++++  + +|+|||||+..... .........+++|+.++.+++++++ .++++||++||.++|+...        
T Consensus        83 ~~~-~~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           83 FLN-GVFTRHGPIDAVVHMCAFLAVG-ESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHH-HHHHHSCCCCEEEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHH-HHHHhcCCCCEEEECCCccCcC-cchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence            988 7776  6 99999999975311 0112334578899999999999885 4889999999999987432        


Q ss_pred             C------CccchhhhHHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCC-----------CcchHHHH-----HHh
Q 019935          211 L------PWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYT-----------SYDLNTLL-----KAT  264 (333)
Q Consensus       211 ~------~~~~~~~~~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~-----------~~~~~~~~-----~~~  264 (333)
                      .      +..+.+.|+  .+|..+|.+++    +.|++++++||+.+ ||+..           ...+..+.     ...
T Consensus       161 ~~~~E~~~~~p~~~Y~--~sK~~~e~~~~~~~~~~gi~~~ilRp~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 1gy8_A          161 EPIDINAKKSPESPYG--ESKLIAERMIRDCAEAYGIKGICLRYFNA-CGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (397)
T ss_dssp             CCBCTTSCCBCSSHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECEE-ECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             cCcCccCCCCCCCchH--HHHHHHHHHHHHHHHHHCCcEEEEeccce-eCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence            1      223345666  55656666554    35999999999955 77752           11233333     222


Q ss_pred             hccc-----------ceeecC------CCCcccccccHHHHHHHHHHhccCcccC-----C---cEEEecCCCCCCCCCC
Q 019935          265 AGER-----------RAVLMG------QGDKLIGEVSRIVVAEACIQALDIEFTE-----G---EIYEINSVEGEGPGSD  319 (333)
Q Consensus       265 ~~~~-----------~~~~~~------~~~~~~~~i~v~Dva~a~~~~l~~~~~~-----g---~~~~v~~g~~~~~~~~  319 (333)
                      .+..           .+.+++      +++..++|+|++|+|++++.+++.+...     +   ++||++++       .
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~-------~  310 (397)
T 1gy8_A          238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS-------R  310 (397)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS-------C
T ss_pred             hcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC-------C
Confidence            3322           344555      6778899999999999999999865432     3   79999985       6


Q ss_pred             cccHHHHHHHHhc
Q 019935          320 PQKWRELFKAAKA  332 (333)
Q Consensus       320 ~~s~~e~~~~i~~  332 (333)
                      .++|.|+++.+++
T Consensus       311 ~~s~~e~~~~i~~  323 (397)
T 1gy8_A          311 GYSVREVIEVARK  323 (397)
T ss_dssp             CEEHHHHHHHHHH
T ss_pred             cccHHHHHHHHHH
Confidence            7899999998874

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=3e-30  Score=235.49  Aligned_cols=235  Identities=14%  Similarity=0.147  Sum_probs=171.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..+++++||||||+||||++|+++|+++|++|++++|+..... .+.......+++++.+|+.|+.      +.++|+||
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~d~vi   96 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------YIEVDQIY   96 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------CCCCSEEE
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------hcCCCEEE
Confidence            3456789999999999999999999999999999999754322 1111111457899999997753      45799999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC------------CCccchhhhHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLK  223 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~------------~~~~~~~~~~~~k  223 (333)
                      |+|+...... ........+++|+.++.+++++++. ++ +||++||.++|+...            .+..+.+.|+  .
T Consensus        97 h~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~--~  172 (343)
T 2b69_A           97 HLASPASPPN-YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD--E  172 (343)
T ss_dssp             ECCSCCSHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH--H
T ss_pred             ECccccCchh-hhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchH--H
Confidence            9999753110 1122344678999999999998854 65 999999999987432            2333445566  4


Q ss_pred             HHHHHHHHH----HhcCCCEEEEEcccccCCCCCC----cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          224 YKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTS----YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       224 ~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|..+|.++    ++.|++++++||+.+ ||+...    ..+..++.....+.....+++++..++|++++|+|++++.+
T Consensus       173 sK~~~E~~~~~~~~~~~~~~~ilrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~  251 (343)
T 2b69_A          173 GKRVAETMCYAYMKQEGVEVRVARIFNT-FGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVAL  251 (343)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCE-ECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEEcce-eCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHH
Confidence            555566555    346999999999955 788642    22444554444455566778888899999999999999999


Q ss_pred             ccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          296 LDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       296 l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..+.  +++||++++       ..+++.|+++.+++
T Consensus       252 ~~~~~--~~~~~i~~~-------~~~s~~e~~~~i~~  279 (343)
T 2b69_A          252 MNSNV--SSPVNLGNP-------EEHTILEFAQLIKN  279 (343)
T ss_dssp             HTSSC--CSCEEESCC-------CEEEHHHHHHHHHH
T ss_pred             HhcCC--CCeEEecCC-------CCCcHHHHHHHHHH
Confidence            98753  678999985       77999999998865

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.3e-30  Score=232.21  Aligned_cols=211  Identities=19%  Similarity=0.250  Sum_probs=169.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+||||||||+||++++++|++. |++|++++|++++...+.    ..+++++.+|++|++++. ++++++|+|||+|+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~~~v~~~~~D~~d~~~l~-~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW----RGKVSVRQLDYFNQESMV-EAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG----BTTBEEEECCTTCHHHHH-HHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh----hCCCEEEEcCCCCHHHHH-HHHhCCCEEEEeCCC
Confidence            47999999999999999999998 999999999988766554    568999999999999999 899999999999986


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEE
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~  240 (333)
                      ..           ....|+.++.+++++++ .+++|||++||.+...  .      .+|...+.+..+|+.+++.|++++
T Consensus        76 ~~-----------~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~--~------~~~~~~~~~~~~e~~~~~~g~~~~  136 (289)
T 3e48_A           76 IH-----------PSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQH--N------NPFHMSPYFGYASRLLSTSGIDYT  136 (289)
T ss_dssp             CC-----------SHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCST--T------CCSTTHHHHHHHHHHHHHHCCEEE
T ss_pred             Cc-----------cchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCC--C------CCCccchhHHHHHHHHHHcCCCEE
Confidence            42           23468999999999885 4899999999965422  1      123334555678888999999999


Q ss_pred             EEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCc
Q 019935          241 IIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDP  320 (333)
Q Consensus       241 ~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~  320 (333)
                      ++|||.+ +|+..     .+...... .....++.++..++|++++|+|++++.++.++...+++|+++ +       +.
T Consensus       137 ilrp~~~-~~~~~-----~~~~~~~~-~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~-------~~  201 (289)
T 3e48_A          137 YVRMAMY-MDPLK-----PYLPELMN-MHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-G-------YS  201 (289)
T ss_dssp             EEEECEE-STTHH-----HHHHHHHH-HTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-C-------EE
T ss_pred             EEecccc-ccccH-----HHHHHHHH-CCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-C-------Cc
Confidence            9999965 56521     22222221 223345667888999999999999999999987668999999 5       78


Q ss_pred             ccHHHHHHHHhc
Q 019935          321 QKWRELFKAAKA  332 (333)
Q Consensus       321 ~s~~e~~~~i~~  332 (333)
                      +++.|+++.+++
T Consensus       202 ~s~~e~~~~~~~  213 (289)
T 3e48_A          202 YDMKELAAILSE  213 (289)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999999998875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=2.6e-31  Score=238.81  Aligned_cols=225  Identities=14%  Similarity=0.120  Sum_probs=163.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchh--hhhhccCCCCceEEEEccCCCcCCCchhhhcC-----CcEE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG-----VTHV  155 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~-----~d~v  155 (333)
                      +||||||+||||++|+++|+++| ++|++++|+....  ..+.      ++. +.+|++|++.++ +++++     +|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~-~~~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLI-QIMAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHH-HHHTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHH-HHHhccccCCCcEE
Confidence            48999999999999999999999 9999999986543  1221      222 678999888888 77764     9999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC-------CccchhhhHHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL-------PWSIMNLFGVLKYKKM  227 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~-------~~~~~~~~~~~k~k~~  227 (333)
                      ||+|+....   ........+++|+.++.+++++++. ++ +||++||.++|+....       +..+.+.|+  .+|..
T Consensus        73 i~~a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~sK~~  146 (310)
T 1eq2_A           73 FHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYG--YSKFL  146 (310)
T ss_dssp             EECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH--HHHHH
T ss_pred             EECcccccC---cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH--HHHHH
Confidence            999997642   2233445788999999999998854 78 9999999999875332       223345566  55666


Q ss_pred             HHHHHHh----cCCCEEEEEcccccCCCCCC------cchHHHHHHhhcccceeecCCCCc-ccccccHHHHHHHHHHhc
Q 019935          228 GEDFVQK----SGLPFTIIRAGRLTDGPYTS------YDLNTLLKATAGERRAVLMGQGDK-LIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       228 ~e~~l~~----~gi~~~~vrpg~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.+++.    .|++++++||+.+ ||+...      ..+..+...+..+.....+++++. .++|+|++|+|++++.++
T Consensus       147 ~e~~~~~~~~~~g~~~~~lrp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~  225 (310)
T 1eq2_A          147 FDEYVRQILPEANSQIVGFRYFNV-YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  225 (310)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEE-ESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeCCcE-ECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHH
Confidence            7766643    5899999999955 788753      224455555555555556777888 899999999999999999


Q ss_pred             cCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          297 DIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.  +++||+++|       ..+++.|+++.+++
T Consensus       226 ~~~~--~~~~~i~~~-------~~~s~~e~~~~i~~  252 (310)
T 1eq2_A          226 ENGV--SGIFNLGTG-------RAESFQAVADATLA  252 (310)
T ss_dssp             HHCC--CEEEEESCS-------CCBCHHHHHHHC--
T ss_pred             hcCC--CCeEEEeCC-------CccCHHHHHHHHHH
Confidence            8765  789999985       67999999998865

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=5e-30  Score=246.17  Aligned_cols=233  Identities=17%  Similarity=0.216  Sum_probs=174.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hhc-----------cCCCCceEEEEccCCCcCCCch
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFG-----------KQDEETLQVCKGDTRNPKDLDP  146 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~-----------~~~~~~~~~v~~D~~d~~~~~~  146 (333)
                      .+++|||||||||||++|+++|++.|++|++++|+..+...   +..           .....+++++.+|++|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            45799999999999999999999999999999998763211   100           001468999999999988887 


Q ss_pred             hhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccC------------CCCC--
Q 019935          147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF------------NELP--  212 (333)
Q Consensus       147 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~------------~~~~--  212 (333)
                       .+.++|+|||||+....    ......++++|+.++.+++++++.++++|||+||.++ +.            ++.+  
T Consensus       228 -~~~~~D~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             -CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred             -CccCCCEEEECCceecC----CCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence             57899999999998642    3345668899999999999988667899999999998 31            1111  


Q ss_pred             -ccchhhhHHHHHHHHHHHHHHh---cCCCEEEEEcccccCCCCCCcc---------hHHHHHHhhcccceeecCCCCcc
Q 019935          213 -WSIMNLFGVLKYKKMGEDFVQK---SGLPFTIIRAGRLTDGPYTSYD---------LNTLLKATAGERRAVLMGQGDKL  279 (333)
Q Consensus       213 -~~~~~~~~~~k~k~~~e~~l~~---~gi~~~~vrpg~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  279 (333)
                       ..+.+.|+  .+|..+|+++++   .|++++++|||.+ +|+.....         +..++........ ...+.++..
T Consensus       302 ~~~~~~~Y~--~sK~~~E~~~~~~~~~gi~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~g~~~  377 (508)
T 4f6l_B          302 GQLLTSPYT--RSKFYSELKVLEAVNNGLDGRIVRVGNL-TSPYNGRWHMRNIKTNRFSMVMNDLLQLDC-IGVSMAEMP  377 (508)
T ss_dssp             SBCCCSHHH--HHHHHHHHHHHHHHHTTCEEEEEEECCE-ESCSSSCCCCTTCTTCHHHHHHHHHTTCSE-EETTGGGSE
T ss_pred             cccCCCcHH--HHHHHHHHHHHHHHHcCCCEEEEeccee-ccCCCCCcccCCcchHHHHHHHHHHHHcCC-CCCCccCce
Confidence             11334444  667778877765   7999999999965 77765432         3344444433222 233446788


Q ss_pred             cccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          280 IGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       280 ~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|++++|+|++++.++.++. .+++||++++       ..++|.|+++.+++
T Consensus       378 ~~~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~-------~~~s~~el~~~i~~  422 (508)
T 4f6l_B          378 VDFSFVDTTARQIVALAQVNT-PQIIYHVLSP-------NKMPVKSLLECVKR  422 (508)
T ss_dssp             EECEEHHHHHHHHHHHTTBCC-SCSEEEESCS-------CEEEHHHHHHHHHS
T ss_pred             EEEEcHHHHHHHHHHHHhCCC-CCCEEEeCCC-------CCCCHHHHHHHHHH
Confidence            999999999999999999876 6889999995       78999999999875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=9.6e-30  Score=226.23  Aligned_cols=210  Identities=14%  Similarity=0.197  Sum_probs=163.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|+|||||| ||||++|+++|+++|++|++++|++.+...+.    ..+++++.+|++|.+      +.++|+|||+|+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~------~~~~d~vi~~a~   72 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----ASGAEPLLWPGEEPS------LDGVTHLLISTA   72 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----HTTEEEEESSSSCCC------CTTCCEEEECCC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----hCCCeEEEecccccc------cCCCCEEEECCC
Confidence            4579999998 99999999999999999999999988776654    467999999999844      568999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCC-------CCCccchhhhHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGED  230 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~~e~  230 (333)
                      .....              ...+.+++++++   .++++|||+||.++|+..       +.+..+.+.|+  .+|..+|+
T Consensus        73 ~~~~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~  136 (286)
T 3ius_A           73 PDSGG--------------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG--RWRVMAEQ  136 (286)
T ss_dssp             CBTTB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH--HHHHHHHH
T ss_pred             ccccc--------------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH--HHHHHHHH
Confidence            75310              123567777663   478999999999999743       23444555666  66788999


Q ss_pred             HHHhc-CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          231 FVQKS-GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       231 ~l~~~-gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                      +++.. |++++++||+.+ ||+.... +    ..+..+...... .++..++|+|++|+|++++.+++++. .+++||++
T Consensus       137 ~~~~~~~~~~~ilRp~~v-~G~~~~~-~----~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~~~~~~~-~g~~~~i~  208 (286)
T 3ius_A          137 QWQAVPNLPLHVFRLAGI-YGPGRGP-F----SKLGKGGIRRII-KPGQVFSRIHVEDIAQVLAASMARPD-PGAVYNVC  208 (286)
T ss_dssp             HHHHSTTCCEEEEEECEE-EBTTBSS-S----TTSSSSCCCEEE-CTTCCBCEEEHHHHHHHHHHHHHSCC-TTCEEEEC
T ss_pred             HHHhhcCCCEEEEeccce-ECCCchH-H----HHHhcCCccccC-CCCcccceEEHHHHHHHHHHHHhCCC-CCCEEEEe
Confidence            99988 999999999955 7876543 1    112223333333 34678899999999999999999876 57899999


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++       ..+++.|+++.+++
T Consensus       209 ~~-------~~~s~~e~~~~i~~  224 (286)
T 3ius_A          209 DD-------EPVPPQDVIAYAAE  224 (286)
T ss_dssp             CS-------CCBCHHHHHHHHHH
T ss_pred             CC-------CCccHHHHHHHHHH
Confidence            85       67999999998875

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=8.9e-30  Score=215.19  Aligned_cols=200  Identities=19%  Similarity=0.215  Sum_probs=157.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|+||||+|+||++++++|+++|++|++++|++++.....    ..+++++.+|++|++++. ++++++|+|||+|+..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~~~-~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADVD-KTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS----CCCSEEEESCTTSHHHHH-HHHTTCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc----CCceEEEEecCCCHHHHH-HHHcCCCEEEECccCC
Confidence            68999999999999999999999999999999987654332    457899999999999998 8899999999999875


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                      ..        ....++|+.++.+++++++. ++++||++||.++++.......+...|+  ..|..+|+++++.|+++++
T Consensus        79 ~~--------~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~--~~K~~~e~~~~~~~i~~~~  148 (206)
T 1hdo_A           79 ND--------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVT--DDHIRMHKVLRESGLKYVA  148 (206)
T ss_dssp             TC--------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHH--HHHHHHHHHHHHTCSEEEE
T ss_pred             CC--------CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHH--HHHHHHHHHHHhCCCCEEE
Confidence            31        12346999999999998854 8899999999999874432222334444  6788899999999999999


Q ss_pred             EEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          242 IRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       242 vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      +||+.+.+++.....             ...+.. ....++++++|+|++++++++++...|++|++++|
T Consensus       149 lrp~~~~~~~~~~~~-------------~~~~~~-~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          149 VMPPHIGDQPLTGAY-------------TVTLDG-RGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             ECCSEEECCCCCSCC-------------EEESSS-CSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             EeCCcccCCCCCcce-------------EecccC-CCCCCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence            999976444332210             011111 11158999999999999999998777899999986

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4e-30  Score=244.84  Aligned_cols=242  Identities=18%  Similarity=0.187  Sum_probs=172.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhC---CCeEEEEEcCcchhhh---hhccCC--------------CCceEEEEccC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSR---NIKSRLLLRDPEKATT---LFGKQD--------------EETLQVCKGDT  138 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~~~~~---~~~~~~--------------~~~~~~v~~D~  138 (333)
                      ...+|+||||||+||||++|+++|++.   |++|++++|+.+....   +.....              ..+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            456789999999999999999999999   8999999998754321   111111              36899999999


Q ss_pred             CCc------CCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-
Q 019935          139 RNP------KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-  210 (333)
Q Consensus       139 ~d~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-  210 (333)
                      +++      +.++ ++++++|+|||||+....     ......+++|+.++.+++++++. ++++|||+||.++|+... 
T Consensus       150 ~~~~~gld~~~~~-~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          150 SEPDLGLDQPMWR-RLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             TSGGGGCCHHHHH-HHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred             CCcccCCCHHHHH-HHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence            854      4566 677899999999998653     44556889999999999998755 889999999999987422 


Q ss_pred             CCc------cchhh---------hHHHHHHHHHHHHHHh----cCCCEEEEEcccccCCCCC--C-cc----hHHHHHHh
Q 019935          211 LPW------SIMNL---------FGVLKYKKMGEDFVQK----SGLPFTIIRAGRLTDGPYT--S-YD----LNTLLKAT  264 (333)
Q Consensus       211 ~~~------~~~~~---------~~~~k~k~~~e~~l~~----~gi~~~~vrpg~~~~g~~~--~-~~----~~~~~~~~  264 (333)
                      .++      .+.+.         .+|..+|..+|.++++    .|++++++|||.+ +|+..  + .+    +..++...
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v-~G~~~~~g~~~~~~~~~~l~~~~  302 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMI-LADTSYAGQLNMSDWVTRMVLSL  302 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE-ECCSSSSSCCCTTBHHHHHHHHH
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECcee-eCCCccCCcCCHHHHHHHHHHHH
Confidence            111      11122         1244667777777654    5999999999965 67632  1 11    22333222


Q ss_pred             hccccee--ecCC------CCcccccccHHHHHHHHHHhccC----cccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          265 AGERRAV--LMGQ------GDKLIGEVSRIVVAEACIQALDI----EFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       265 ~~~~~~~--~~~~------~~~~~~~i~v~Dva~a~~~~l~~----~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .......  ..+.      ++..++|+|++|+|++++.++.+    +...+++||+++++.     ..++|.|+++.+++
T Consensus       303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~-----~~~s~~el~~~l~~  377 (478)
T 4dqv_A          303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD-----DGIGLDEYVDWLIE  377 (478)
T ss_dssp             HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC-----SSCSHHHHHHHHHH
T ss_pred             HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC-----CCcCHHHHHHHHHH
Confidence            2212211  1111      15678999999999999999876    455678999999521     33899999999875

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.97  E-value=4.4e-31  Score=236.28  Aligned_cols=219  Identities=17%  Similarity=0.160  Sum_probs=171.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+ +|++|++++|+..               ++.+|++|++++. +++++  +|+|||+|+
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~-~~~~~~~~d~vih~a~   63 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVA-ETVRKLRPDVIVNAAA   63 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHH-HHHHHHCCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHH-HHHHhcCCCEEEECcc
Confidence            479999999999999999999 8999999999751               2468999999888 77875  999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccchhhhHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ..... .........+++|+.++.+++++++. ++ ||||+||.++|+...       .+..+.+.|+  .+|..+|+++
T Consensus        64 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~  139 (299)
T 1n2s_A           64 HTAVD-KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYG--KTKLAGEKAL  139 (299)
T ss_dssp             CCCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH--HHHHHHHHHH
T ss_pred             cCCHh-hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHH--HHHHHHHHHH
Confidence            75311 11233445788999999999998865 66 899999999987432       2334455666  6678899999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--c-CCcEEEec
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--T-EGEIYEIN  309 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~-~g~~~~v~  309 (333)
                      +..+.+++++||+.+ ||+.....+..+......+.....++  +..++|+|++|+|++++.+++++.  . .+++||++
T Consensus       140 ~~~~~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~  216 (299)
T 1n2s_A          140 QDNCPKHLIFRTSWV-YAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV  216 (299)
T ss_dssp             HHHCSSEEEEEECSE-ECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECC
T ss_pred             HHhCCCeEEEeeeee-cCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEe
Confidence            988889999999955 78876544555555554444444544  478899999999999999998763  2 47899999


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +|       +..++.|+++.+++
T Consensus       217 ~~-------~~~s~~e~~~~i~~  232 (299)
T 1n2s_A          217 AG-------GTTTWHDYAALVFD  232 (299)
T ss_dssp             CB-------SCEEHHHHHHHHHH
T ss_pred             CC-------CCCCHHHHHHHHHH
Confidence            95       67999999998864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=1.7e-30  Score=236.78  Aligned_cols=238  Identities=15%  Similarity=0.061  Sum_probs=174.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh--hhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi  156 (333)
                      ++|+||||||+||||++++++|+++|++|++++|++++..  .+.......+++++.+|++|++++. +++++  +|+||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNII-RTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHH-HHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHH-HHHHhcCCCEEE
Confidence            3579999999999999999999999999999999876432  1211111347899999999999988 77774  69999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccCC-------CCCccchhhhHHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~~-------~~~~~~~~~~~~~k~k~~  227 (333)
                      ||||..... ...+.....+++|+.++.+++++++. ++ ++||++||.++|+..       +.+..+.+.|+.+  |..
T Consensus        81 h~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~s--K~~  157 (345)
T 2z1m_A           81 NLAAQSFVG-VSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVA--KLF  157 (345)
T ss_dssp             ECCCCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH--HHH
T ss_pred             ECCCCcchh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHH--HHH
Confidence            999975311 11233445788999999999998754 66 899999999998742       3344556667744  555


Q ss_pred             HHHHHH----hcCCCEEEEEcccccCCCCCCc-ch----HHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          228 GEDFVQ----KSGLPFTIIRAGRLTDGPYTSY-DL----NTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       228 ~e~~l~----~~gi~~~~vrpg~~~~g~~~~~-~~----~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      +|.+++    +.+++++++|+.++ +||+... .+    ..+...+..+ .....+++++..++|+|++|+|++++.+++
T Consensus       158 ~e~~~~~~~~~~~~~~~~~r~~~~-~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~  236 (345)
T 2z1m_A          158 GHWITVNYREAYNMFACSGILFNH-ESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ  236 (345)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCceEeeeeeee-cCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence            665543    45899999999855 6775421 12    1122222222 233456777888999999999999999998


Q ss_pred             CcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          298 IEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       298 ~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.  +++||+++|       ..+++.|+++.+++
T Consensus       237 ~~~--~~~~~i~~~-------~~~s~~e~~~~i~~  262 (345)
T 2z1m_A          237 QPE--PDDYVIATG-------ETHTVREFVEKAAK  262 (345)
T ss_dssp             SSS--CCCEEECCS-------CCEEHHHHHHHHHH
T ss_pred             CCC--CceEEEeCC-------CCccHHHHHHHHHH
Confidence            764  478999985       67899999998864

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=6.6e-30  Score=218.48  Aligned_cols=202  Identities=12%  Similarity=0.165  Sum_probs=144.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+||||||+|+||++++++|+++|++|++++|++++...+.     .+++++.+|++|+++   +.+.++|+||||||..
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~---~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL---SDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH---HHHTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh---hhhcCCCEEEECCcCC
Confidence            47999999999999999999999999999999988776552     578999999999887   4678999999999974


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--------CCccchhhhHHHHHHHHHHHHHH
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--------~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      .          ...+.|+.++.+++++++. ++++||++||.+++....        .+..+.+.|+.+|.+......++
T Consensus        73 ~----------~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           73 P----------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             T----------TTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHH
T ss_pred             c----------cccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            2          1356799999999998865 789999999997754221        22334556776666554444566


Q ss_pred             --hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          234 --KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       234 --~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                        +.|+++++|||+.+ +|+...  ...+.   .........+++   .++++++|+|++++.+++++...++.|++.+.
T Consensus       143 ~~~~gi~~~ivrp~~v-~g~~~~--~~~~~---~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~  213 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAM-FEPGER--TGDYQ---IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGK  213 (221)
T ss_dssp             TTTTTSCEEEEECSSC-CCCC-----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC-
T ss_pred             hhccCccEEEEeCcce-ecCCCc--cCceE---eccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCC
Confidence              68999999999955 676321  11111   112222222222   37999999999999999999888999999994

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-30  Score=240.33  Aligned_cols=237  Identities=16%  Similarity=0.121  Sum_probs=173.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccC---CCCceEEEEccCCCcCCCchhhhcC--
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEG--  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~~--  151 (333)
                      +|+||||||+||||++++++|+++|++|++++|+.+.     .+.+....   ...+++++.+|++|++++. +++++  
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~  102 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV-KIINEVK  102 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHH-HHHHHHC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHH-HHHHhcC
Confidence            4789999999999999999999999999999998653     22221100   1357889999999999888 77774  


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC---CeEEEEeccccccCC-------CCCccchhhhH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKFN-------ELPWSIMNLFG  220 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~---~~~v~~SS~~~~~~~-------~~~~~~~~~~~  220 (333)
                      +|+||||||..... ..+.+....+++|+.++.+++++++. ++   ++||++||.++|+..       +.+..+.+.|+
T Consensus       103 ~d~vih~A~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  181 (375)
T 1t2a_A          103 PTEIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG  181 (375)
T ss_dssp             CSEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCEEEECCCccccc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhH
Confidence            69999999975311 01123345678999999999998754 66   899999999998742       22344556676


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCCcc-h----HHHHHHhh-cccceeecCCCCcccccccHHHHHH
Q 019935          221 VLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSYD-L----NTLLKATA-GERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       221 ~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~~-~----~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .  +|..+|.+++    +.|++++++||+.+ |||..... .    ..++..+. +......+++++..++|+|++|+|+
T Consensus       182 ~--sK~~~e~~~~~~~~~~~~~~~i~r~~~~-~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  258 (375)
T 1t2a_A          182 A--AKLYAYWIVVNFREAYNLFAVNGILFNH-ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  258 (375)
T ss_dssp             H--HHHHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             H--HHHHHHHHHHHHHHHhCCCEEEEecccc-cCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence            4  4555665554    45999999999965 78764321 1    22222222 3233456788889999999999999


Q ss_pred             HHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          291 ACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       291 a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+++++.  +++||++++       ..++|.|+++.+++
T Consensus       259 a~~~~~~~~~--~~~~ni~~~-------~~~s~~e~~~~i~~  291 (375)
T 1t2a_A          259 AMWLMLQNDE--PEDFVIATG-------EVHSVREFVEKSFL  291 (375)
T ss_dssp             HHHHHHHSSS--CCCEEECCS-------CCEEHHHHHHHHHH
T ss_pred             HHHHHHhcCC--CceEEEeCC-------CcccHHHHHHHHHH
Confidence            9999998764  478999985       67999999998864

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=7e-30  Score=235.42  Aligned_cols=237  Identities=16%  Similarity=0.115  Sum_probs=171.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhhhccC-----CCCceEEEEccCCCcCCCchhhhcC--C
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEG--V  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~~--~  152 (333)
                      ||+||||||+||||++++++|+++|++|++++|+.+..  ..+....     ...+++++.+|++|++++. +++++  +
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLT-RILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHH-HHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHH-HHHHhcCC
Confidence            47899999999999999999999999999999986542  1111100     0357889999999999888 77764  7


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC---CeEEEEeccccccCC-------CCCccchhhhHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKFN-------ELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~---~~~v~~SS~~~~~~~-------~~~~~~~~~~~~  221 (333)
                      |+||||||..... ..++.....+++|+.++.+++++++. ++   ++||++||.++|+..       +.+..+.+.|+.
T Consensus        80 d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~  158 (372)
T 1db3_A           80 DEVYNLGAMSHVA-VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAV  158 (372)
T ss_dssp             SEEEECCCCCTTT-TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHH
T ss_pred             CEEEECCcccCcc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHH
Confidence            9999999975421 12233334668899999999998754 66   799999999998742       223345566764


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhccc-ceeecCCCCcccccccHHHHHHH
Q 019935          222 LKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGER-RAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       222 ~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                        +|..+|.+++    +.|++++++|+..+ |||.....     +..++..+..+. ....+++++..++|+|++|+|++
T Consensus       159 --sK~~~e~~~~~~~~~~~~~~~~~r~~~~-~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  235 (372)
T 1db3_A          159 --AKLYAYWITVNYRESYGMYACNGILFNH-ESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (372)
T ss_dssp             --HHHHHHHHHHHHHHHHCCCEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHhCCCeEEEEECCc-cCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence              4555665543    45999999999865 77764321     222333333232 34567888899999999999999


Q ss_pred             HHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++.+++++.  +++||++++       ..+++.|+++.+++
T Consensus       236 ~~~~~~~~~--~~~~ni~~~-------~~~s~~e~~~~i~~  267 (372)
T 1db3_A          236 QWMMLQQEQ--PEDFVIATG-------VQYSVRQFVEMAAA  267 (372)
T ss_dssp             HHHTTSSSS--CCCEEECCC-------CCEEHHHHHHHHHH
T ss_pred             HHHHHhcCC--CceEEEcCC-------CceeHHHHHHHHHH
Confidence            999998754  478999985       67999999999875

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=2.2e-30  Score=230.18  Aligned_cols=208  Identities=20%  Similarity=0.298  Sum_probs=161.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +||||||+||||++++++|+++  |++|++++|++++...+.    ..+++++.+|++|++++. ++++++|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~-~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEAALT-SALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HTTCEEEECCTTCHHHHH-HHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cCCCeEEEcCCCCHHHHH-HHHhCCCEEEEeCCC
Confidence            4899999999999999999998  999999999887655443    346889999999999999 899999999999985


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEE
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~  240 (333)
                      .             .+.|+.++.+++++++. ++++||++||.+++..   +    ..|+  ..|..+|+++++.|++++
T Consensus        76 ~-------------~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---~----~~y~--~sK~~~e~~~~~~~~~~~  133 (286)
T 2zcu_A           76 E-------------VGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS---P----LGLA--DEHIETEKMLADSGIVYT  133 (286)
T ss_dssp             -------------------CHHHHHHHHHHHHTCCEEEEEEETTTTTC---C----STTH--HHHHHHHHHHHHHCSEEE
T ss_pred             C-------------chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---c----chhH--HHHHHHHHHHHHcCCCeE
Confidence            2             11477899999998854 8999999999988721   1    2455  667889999999999999


Q ss_pred             EEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCc
Q 019935          241 IIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDP  320 (333)
Q Consensus       241 ~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~  320 (333)
                      ++||+.+ +++..    ..+..... .... .++.++..+++++++|+|++++.++.++...+++|+++++       ..
T Consensus       134 ilrp~~~-~~~~~----~~~~~~~~-~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-------~~  199 (286)
T 2zcu_A          134 LLRNGWY-SENYL----ASAPAALE-HGVF-IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGD-------SA  199 (286)
T ss_dssp             EEEECCB-HHHHH----TTHHHHHH-HTEE-EESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCS-------SC
T ss_pred             EEeChHH-hhhhH----HHhHHhhc-CCce-eccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCC-------Cc
Confidence            9999854 43221    11222222 2222 3566778899999999999999999886666889999984       67


Q ss_pred             ccHHHHHHHHhc
Q 019935          321 QKWRELFKAAKA  332 (333)
Q Consensus       321 ~s~~e~~~~i~~  332 (333)
                      +++.|+++.+++
T Consensus       200 ~s~~e~~~~i~~  211 (286)
T 2zcu_A          200 WTLTQLAAELTK  211 (286)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999998864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.97  E-value=6.6e-30  Score=232.62  Aligned_cols=234  Identities=23%  Similarity=0.277  Sum_probs=159.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ++++||||||+||||++|+++|+++|++|++++|+.+...   .+..... ..+++++.+|++|+++++ ++++++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFD-EAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTH-HHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHH-HHHcCCCEEE
Confidence            5689999999999999999999999999999999876322   2211100 135889999999999999 8999999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccc-cCC-------CCCcc----------ch
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVT-KFN-------ELPWS----------IM  216 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~-~~~-------~~~~~----------~~  216 (333)
                      |+|+....  ...+.....+++|+.|+.+++++++. + ++||||+||.+++ +..       +..+.          +.
T Consensus        83 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (337)
T 2c29_D           83 HVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTA  160 (337)
T ss_dssp             ECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCcc
Confidence            99986421  11111124788999999999998754 5 8999999998743 321       11111          12


Q ss_pred             hhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcchHHHH-HH---hhcccceeecCCCCcccccccHHHH
Q 019935          217 NLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYDLNTLL-KA---TAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       217 ~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ..|+  .+|..+|.++    +++|++++++||+.+ |||.....+.... ..   ..+...  .++.. ...+|+|++|+
T Consensus       161 ~~Y~--~sK~~~E~~~~~~~~~~gi~~~~lrp~~v-~Gp~~~~~~~~~~~~~~~~~~g~~~--~~~~~-~~~~~i~v~Dv  234 (337)
T 2c29_D          161 WMYF--VSKTLAEQAAWKYAKENNIDFITIIPTLV-VGPFIMSSMPPSLITALSPITGNEA--HYSII-RQGQFVHLDDL  234 (337)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHHTCCEEEEEECEE-ESCCSCSSCCHHHHHHTHHHHTCGG--GHHHH-TEEEEEEHHHH
T ss_pred             chHH--HHHHHHHHHHHHHHHHcCCcEEEEeCCce-ECCCCCCCCCchHHHHHHHHcCCCc--ccccc-CCCCEEEHHHH
Confidence            3455  4455566544    456999999999955 8887533222221 11   111111  12111 22359999999


Q ss_pred             HHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          289 AEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++.+++++.. +..|++.+        ...+++|+++.+++
T Consensus       235 a~a~~~~~~~~~~-~~~~~~~~--------~~~s~~e~~~~i~~  269 (337)
T 2c29_D          235 CNAHIYLFENPKA-EGRYICSS--------HDCIILDLAKMLRE  269 (337)
T ss_dssp             HHHHHHHHHCTTC-CEEEEECC--------EEEEHHHHHHHHHH
T ss_pred             HHHHHHHhcCccc-CceEEEeC--------CCCCHHHHHHHHHH
Confidence            9999999987544 34676655        45799999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=4.5e-29  Score=213.88  Aligned_cols=204  Identities=14%  Similarity=0.125  Sum_probs=153.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+||||||||+||++++++|+++|++|++++|++++...+.    ..+++++.+|++|+++   +.++++|+||||||..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~D~~d~~~---~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----GATVATLVKEPLVLTE---ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----CTTSEEEECCGGGCCH---HHHTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----CCCceEEecccccccH---hhcccCCEEEECCccC
Confidence            47999999999999999999999999999999988877654    5689999999999887   4678999999999975


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC--------Cc--cchhhhHHHHHHHHHHH-
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL--------PW--SIMNLFGVLKYKKMGED-  230 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~--------~~--~~~~~~~~~k~k~~~e~-  230 (333)
                      .      .  ....++|+.++.+++++++. + +|||++||.+++.....        +.  .+.+.|+.+|...+... 
T Consensus        74 ~------~--~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  144 (224)
T 3h2s_A           74 W------G--SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQF  144 (224)
T ss_dssp             T------T--SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred             C------C--cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHH
Confidence            1      1  12467899999999999865 7 99999999876542211        11  12556776654433222 


Q ss_pred             HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          231 FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       231 ~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      +.++.|+++++|||+.+ +|+.....+       ......  +..++...++++++|+|++++.+++++...+++|++.+
T Consensus       145 ~~~~~~i~~~ivrp~~v-~g~~~~~~~-------~~~~~~--~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~  214 (224)
T 3h2s_A          145 LQMNANVNWIGISPSEA-FPSGPATSY-------VAGKDT--LLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD  214 (224)
T ss_dssp             HTTCTTSCEEEEEECSB-CCCCCCCCE-------EEESSB--CCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred             HHhcCCCcEEEEcCccc-cCCCcccCc-------eecccc--cccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence            23467999999999955 676322110       001111  12234556899999999999999999888899999998


Q ss_pred             CC
Q 019935          311 VE  312 (333)
Q Consensus       311 g~  312 (333)
                      -+
T Consensus       215 ~~  216 (224)
T 3h2s_A          215 AD  216 (224)
T ss_dssp             CC
T ss_pred             Cc
Confidence            53

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=4.6e-30  Score=234.64  Aligned_cols=222  Identities=18%  Similarity=0.184  Sum_probs=170.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc----chhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~----~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~v  155 (333)
                      +++||||||||+||++|+++|++.|++|++++|++    ++.+.+.. ....+++++.+|++|++++. ++++  ++|+|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-l~~~~v~~~~~Dl~d~~~l~-~~~~~~~~d~V   87 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKA-LEDKGAIIVYGLINEQEAME-KILKEHEIDIV   87 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHH-HHHHHTTCCEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHH-HHhCCcEEEEeecCCHHHHH-HHHhhCCCCEE
Confidence            46899999999999999999999999999999976    22221111 11468999999999999999 8999  99999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ||+++.                .|+.++.+++++++. + +++||+ |+.+....+..+..+...|+  ..|..+|++++
T Consensus        88 i~~a~~----------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~--~sK~~~e~~l~  148 (346)
T 3i6i_A           88 VSTVGG----------------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMY--REKRRVRQLVE  148 (346)
T ss_dssp             EECCCG----------------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHH--HHHHHHHHHHH
T ss_pred             EECCch----------------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHH--HHHHHHHHHHH
Confidence            999975                277889999998865 7 999997 54443223333445555555  67888999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      +.|++++++|||.+ +|.......... ...........+++++..++|++++|+|++++.++.++...+++|++.+.  
T Consensus       149 ~~g~~~tivrpg~~-~g~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~--  224 (346)
T 3i6i_A          149 ESGIPFTYICCNSI-ASWPYYNNIHPS-EVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPS--  224 (346)
T ss_dssp             HTTCCBEEEECCEE-SSCCCSCC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG--
T ss_pred             HcCCCEEEEEeccc-ccccCccccccc-cccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCC--
Confidence            99999999999955 665433222111 11123455667888999999999999999999999998777889999841  


Q ss_pred             CCCCCCcccHHHHHHHHhc
Q 019935          314 EGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       314 ~~~~~~~~s~~e~~~~i~~  332 (333)
                          .+.++|.|+++.+++
T Consensus       225 ----~~~~s~~e~~~~~~~  239 (346)
T 3i6i_A          225 ----CNCLNINELASVWEK  239 (346)
T ss_dssp             ----GGEECHHHHHHHHHH
T ss_pred             ----CCCCCHHHHHHHHHH
Confidence                178999999999875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.97  E-value=1.1e-29  Score=229.50  Aligned_cols=232  Identities=22%  Similarity=0.266  Sum_probs=155.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccch---hhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEK---ATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~---~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      +|+||||||+||||++++++|+++|++|++++| +++.   ...+..... ..+++++.+|++|+++++ ++++++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFA-AAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGH-HHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHH-HHHcCCCEEE
Confidence            478999999999999999999999999999998 6532   111111000 135788999999999999 8999999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-C-CCCeEEEEecccccc-CCC--CCcc--------------chh
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTK-FNE--LPWS--------------IMN  217 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~-~~~~~v~~SS~~~~~-~~~--~~~~--------------~~~  217 (333)
                      |+|+....  ...+....++++|+.|+.+++++++ . +++|||++||.+++. ...  .+..              +..
T Consensus        80 h~A~~~~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           80 HTASPIDF--AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EcCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            99975321  1111123378899999999999774 4 689999999987542 111  0111              011


Q ss_pred             -hhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcchHHHH----HHhhcccceeecCCCCcccccccHHHH
Q 019935          218 -LFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYDLNTLL----KATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       218 -~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                       .|+  .+|..+|.++    +++|++++++||+.+ +|+..........    ....+.. . .++.  ...+|+|++|+
T Consensus       158 ~~Y~--~sK~~~e~~~~~~~~~~gi~~~~lrp~~v-~g~~~~~~~~~~~~~~~~~~~g~~-~-~~~~--~~~~~i~v~Dv  230 (322)
T 2p4h_X          158 WNYA--VSKTLAEKAVLEFGEQNGIDVVTLILPFI-VGRFVCPKLPDSIEKALVLVLGKK-E-QIGV--TRFHMVHVDDV  230 (322)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHTTCCEEEEEECEE-ESCCCSSSCCHHHHHHTHHHHSCG-G-GCCE--EEEEEEEHHHH
T ss_pred             ccHH--HHHHHHHHHHHHHHHhcCCcEEEEcCCce-ECCCCCCCCCchHHHHHHHHhCCC-c-cCcC--CCcCEEEHHHH
Confidence             355  4455555544    347999999999955 8886532222111    1122211 1 1222  22389999999


Q ss_pred             HHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          289 AEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++.+++++...|+ |++ ++       ..+++.|+++.+++
T Consensus       231 a~a~~~~~~~~~~~g~-~~~-~~-------~~~s~~e~~~~i~~  265 (322)
T 2p4h_X          231 ARAHIYLLENSVPGGR-YNC-SP-------FIVPIEEMSQLLSA  265 (322)
T ss_dssp             HHHHHHHHHSCCCCEE-EEC-CC-------EEEEHHHHHHHHHH
T ss_pred             HHHHHHHhhCcCCCCC-EEE-cC-------CCCCHHHHHHHHHH
Confidence            9999999987554454 884 42       66899999998864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=4.2e-30  Score=234.31  Aligned_cols=237  Identities=15%  Similarity=0.084  Sum_probs=173.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-------CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-c
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-E  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-~  150 (333)
                      .+++|+||||||+||||++|+++|+++|       ++|++++|+..+....    ...+++++.+|++|+++++ +++ .
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~----~~~~~~~~~~Dl~d~~~~~-~~~~~   85 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG----FSGAVDARAADLSAPGEAE-KLVEA   85 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT----CCSEEEEEECCTTSTTHHH-HHHHT
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc----cCCceeEEEcCCCCHHHHH-HHHhc
Confidence            4567899999999999999999999999       8999999986543221    1457889999999999998 777 4


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-----CCeEEEEeccccccCC-------CCCccchh
Q 019935          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-----LKRIVLVSSVGVTKFN-------ELPWSIMN  217 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-----~~~~v~~SS~~~~~~~-------~~~~~~~~  217 (333)
                      ++|+|||+||....  ....+....+++|+.++.+++++++. +     +++||++||.++|+..       +.+..+.+
T Consensus        86 ~~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~  163 (342)
T 2hrz_A           86 RPDVIFHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLT  163 (342)
T ss_dssp             CCSEEEECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSS
T ss_pred             CCCEEEECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcc
Confidence            89999999997531  01123344678999999999998854 4     7999999999998743       12233455


Q ss_pred             hhHHHHHHHHHHHHHHh----cCCCEEEEEcccccCCCCCC-----cchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          218 LFGVLKYKKMGEDFVQK----SGLPFTIIRAGRLTDGPYTS-----YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       218 ~~~~~k~k~~~e~~l~~----~gi~~~~vrpg~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .|+  .+|..+|.+++.    .+++++++|++.++.+|...     ..+..++.....+......+.++....+++++|+
T Consensus       164 ~Y~--~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv  241 (342)
T 2hrz_A          164 SYG--TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSA  241 (342)
T ss_dssp             HHH--HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHH
T ss_pred             hHH--HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHH
Confidence            666  455556665543    47899999998664325431     1133344444444444444455666778999999


Q ss_pred             HHHHHHhccCccc---CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          289 AEACIQALDIEFT---EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~~---~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++++.+++.+..   .+++||+++        ..++|.|+++.+++
T Consensus       242 a~~~~~~~~~~~~~~~~~~~~ni~g--------~~~s~~e~~~~i~~  280 (342)
T 2hrz_A          242 VGFLIHGAMIDVEKVGPRRNLSMPG--------LSATVGEQIEALRK  280 (342)
T ss_dssp             HHHHHHHHHSCHHHHCSCCEEECCC--------EEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhccccccCCccEEEcCC--------CCCCHHHHHHHHHH
Confidence            9999999987643   467999964        56899999998864

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-30  Score=232.61  Aligned_cols=214  Identities=19%  Similarity=0.222  Sum_probs=167.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      .++|||||||||||++++++|+++|++|++++|+                   .+|++|++++. ++++  ++|+|||+|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~-~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVN-KFFNEKKPNVVINCA   71 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHH-HHHHHHCCSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHH-HHHHhcCCCEEEECC
Confidence            4689999999999999999999999999999986                   27999999888 7787  899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccchhhhHHHHHHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k~~~e~~  231 (333)
                      |..... .........+++|+.++.+++++++. ++ +||++||.++|+...       .+..+.+.|+  .+|..+|.+
T Consensus        72 ~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~E~~  147 (292)
T 1vl0_A           72 AHTAVD-KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYG--KTKLEGENF  147 (292)
T ss_dssp             CCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH--HHHHHHHHH
T ss_pred             ccCCHH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHH--HHHHHHHHH
Confidence            975310 01123345788999999999998854 77 999999999987432       2223445565  667889999


Q ss_pred             HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          232 VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       232 l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      ++..+.+++++||+.+ +|+ ....+..+......+......+  +..++|++++|+|++++.+++++  .+++||+++|
T Consensus       148 ~~~~~~~~~~lR~~~v-~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~--~~~~~~i~~~  221 (292)
T 1vl0_A          148 VKALNPKYYIVRTAWL-YGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK--NYGTFHCTCK  221 (292)
T ss_dssp             HHHHCSSEEEEEECSE-ESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT--CCEEEECCCB
T ss_pred             HHhhCCCeEEEeeeee-eCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC--CCcEEEecCC
Confidence            9988889999999966 688 3333444554444344444444  47789999999999999999876  5789999985


Q ss_pred             CCCCCCCCcccHHHHHHHHhc
Q 019935          312 EGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       312 ~~~~~~~~~~s~~e~~~~i~~  332 (333)
                             ...++.|+++.+++
T Consensus       222 -------~~~s~~e~~~~i~~  235 (292)
T 1vl0_A          222 -------GICSWYDFAVEIFR  235 (292)
T ss_dssp             -------SCEEHHHHHHHHHH
T ss_pred             -------CCccHHHHHHHHHH
Confidence                   67999999998864

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.96  E-value=5.1e-30  Score=253.38  Aligned_cols=237  Identities=16%  Similarity=0.156  Sum_probs=179.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC-CchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~-~~~~~~~~~d~vi~  157 (333)
                      .++|+||||||+||||++++++|+++ |++|++++|+..+...+..   ..+++++.+|++|+++ ++ ++++++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~---~~~v~~v~~Dl~d~~~~~~-~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIE-YHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT---CTTEEEEECCTTTCHHHHH-HHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc---CCceEEEECCCCCcHHHHH-HhhcCCCEEEE
Confidence            35689999999999999999999998 8999999998766544332   4678999999999765 66 67889999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-CCc-------------cchhhhHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-LPW-------------SIMNLFGVL  222 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-~~~-------------~~~~~~~~~  222 (333)
                      +||...... ........+++|+.++.+++++++. + +|||++||.++|+... .++             .+.+.|+  
T Consensus       389 ~Aa~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~--  464 (660)
T 1z7e_A          389 LVAIATPIE-YTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS--  464 (660)
T ss_dssp             CCCCCCTHH-HHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHH--
T ss_pred             CceecCccc-cccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcH--
Confidence            999754210 0122344678899999999998754 6 9999999999987432 111             1223455  


Q ss_pred             HHHHHHHHHH----HhcCCCEEEEEcccccCCCCCC----------cchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          223 KYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTS----------YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       223 k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .+|..+|.++    ++.|++++++||+.+ ||+...          ..+..+......+.....+++++..++|+|++|+
T Consensus       465 ~sK~~~E~~~~~~~~~~gi~~~ilRpg~v-~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  543 (660)
T 1z7e_A          465 VSKQLLDRVIWAYGEKEGLQFTLFRPFNW-MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG  543 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSE-ESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEECCCcc-cCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHH
Confidence            5566677666    346999999999955 788643          1234455545445555667778889999999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCCCCCCCCC-cccHHHHHHHHhc
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVEGEGPGSD-PQKWRELFKAAKA  332 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~-~~s~~e~~~~i~~  332 (333)
                      |++++.+++++.  ..+++||+++|       + .++|.|+++.+.+
T Consensus       544 a~ai~~~l~~~~~~~~g~~~ni~~~-------~~~~s~~el~~~i~~  583 (660)
T 1z7e_A          544 IEALYRIIENAGNRCDGEIINIGNP-------ENEASIEELGEMLLA  583 (660)
T ss_dssp             HHHHHHHHHCGGGTTTTEEEEECCG-------GGEEEHHHHHHHHHH
T ss_pred             HHHHHHHHhCccccCCCeEEEECCC-------CCCcCHHHHHHHHHH
Confidence            999999998764  35789999984       4 7899999998864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.96  E-value=3.7e-30  Score=232.22  Aligned_cols=225  Identities=17%  Similarity=0.179  Sum_probs=168.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      +||||||+||||++++++|+++  |++|++++|+.....         +++++.+|++|++++. ++++  ++|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~-~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEID-RAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHH-HHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHH-HHHhhcCCcEEEECC
Confidence            4899999999999999999998  899999998754321         4678899999999998 7787  899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCC--------CCccchhhhHHHHHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMGED  230 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~--------~~~~~~~~~~~~k~k~~~e~  230 (333)
                      +.....  ........+++|+.++.+++++++ .++++||++||.++|+...        .+..+.+.|+.+  |..+|.
T Consensus        71 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~s--K~~~e~  146 (317)
T 3ajr_A           71 GILSAK--GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVT--KIAAEL  146 (317)
T ss_dssp             CCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHH--HHHHHH
T ss_pred             cccCCc--cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHH--HHHHHH
Confidence            874310  112234567899999999999885 4889999999999987421        223345677755  444554


Q ss_pred             HH----HhcCCCEEEEEcccccCCCCC----C---cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          231 FV----QKSGLPFTIIRAGRLTDGPYT----S---YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       231 ~l----~~~gi~~~~vrpg~~~~g~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      ++    ++.|++++++||+.+ +|+..    .   +....+...+. ......+++++..++|+|++|+|++++.++.++
T Consensus       147 ~~~~~~~~~~~~~~~lR~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  224 (317)
T 3ajr_A          147 LGQYYYEKFGLDVRSLRYPGI-ISYKAEPTAGTTDYAVEIFYYAVK-REKYKCYLAPNRALPMMYMPDALKALVDLYEAD  224 (317)
T ss_dssp             HHHHHHHHHCCEEEEEEECEE-ECSSSCCCSCSSTHHHHHHHHHHT-TCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhcCCeEEEEecCcE-eccCCCCCCcchhHHHHHHHHHHh-CCCceeecCccceeeeeEHHHHHHHHHHHHhCC
Confidence            44    456999999999866 56432    1   11222333333 344556667788899999999999999999876


Q ss_pred             cc---CCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          300 FT---EGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       300 ~~---~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..   .+++||+++        ...++.|+++.+.+
T Consensus       225 ~~~~~~g~~~~i~~--------~~~s~~e~~~~i~~  252 (317)
T 3ajr_A          225 RDKLVLRNGYNVTA--------YTFTPSELYSKIKE  252 (317)
T ss_dssp             GGGCSSCSCEECCS--------EEECHHHHHHHHHT
T ss_pred             ccccccCceEecCC--------ccccHHHHHHHHHH
Confidence            43   358999986        45899999999875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.96  E-value=3.7e-30  Score=234.30  Aligned_cols=237  Identities=19%  Similarity=0.217  Sum_probs=167.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi  156 (333)
                      |+||||||+||||++++++|+++|++|++++|....    .+.+... ...+++++.+|++|++++. ++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~-~~~~~~~~D~vi   78 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMT-EILHDHAIDTVI   78 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHH-HHHHHTTCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh-cCCcceEEEccCCCHHHHH-HHhhccCCCEEE
Confidence            479999999999999999999999999999874322    1111110 0346788999999999888 6775  599999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccc-hhhhHHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSI-MNLFGVLKYKKM  227 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~-~~~~~~~k~k~~  227 (333)
                      ||||..... .........+++|+.++.+++++++. ++++||++||.++|+...       .+..+ .+.|+  .+|..
T Consensus        79 h~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~--~sK~~  155 (338)
T 1udb_A           79 HFAGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYG--KSKLM  155 (338)
T ss_dssp             ECCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH--HHHHH
T ss_pred             ECCccCccc-cchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHH--HHHHH
Confidence            999975311 01122234678999999999998854 889999999999987421       22222 45666  55666


Q ss_pred             HHHHHHh----c-CCCEEEEEcccccCCCCC------------CcchHHHHHHhhc-ccceeecC------CCCcccccc
Q 019935          228 GEDFVQK----S-GLPFTIIRAGRLTDGPYT------------SYDLNTLLKATAG-ERRAVLMG------QGDKLIGEV  283 (333)
Q Consensus       228 ~e~~l~~----~-gi~~~~vrpg~~~~g~~~------------~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i  283 (333)
                      +|.+++.    . |++++++||+++ ||+..            ......+.....+ ...+..++      +++..++|+
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v-~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  234 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNP-VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEE-ECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeecee-cCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeE
Confidence            6665543    3 799999999855 66631            1112333333332 22333333      567788999


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++|+|++++.+++.+.  ..+++||++++       ...++.|+++.+++
T Consensus       235 ~v~Dva~a~~~~l~~~~~~~~~~~yni~~~-------~~~s~~e~~~~i~~  278 (338)
T 1udb_A          235 HVMDLADGHVVAMEKLANKPGVHIYNLGAG-------VGNSVLDVVNAFSK  278 (338)
T ss_dssp             EHHHHHHHHHHHHHHHTTCCEEEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhhhhccCCCcEEEecCC-------CceeHHHHHHHHHH
Confidence            99999999999997632  22479999985       67899999998864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.96  E-value=4.1e-30  Score=237.97  Aligned_cols=237  Identities=14%  Similarity=0.122  Sum_probs=173.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccCC--CC-ceEEEEccCCCcCCCchhhhcC--
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EE-TLQVCKGDTRNPKDLDPAIFEG--  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~~--~~-~~~~v~~D~~d~~~~~~~~~~~--  151 (333)
                      +++||||||+||||++|++.|+++|++|++++|+.++     .+.+.....  .. +++++.+|++|++++. +++++  
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~  106 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR-RWIDVIK  106 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHH-HHHHHHC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHH-HHHHhcC
Confidence            3789999999999999999999999999999998654     222211000  12 7889999999999888 77775  


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-----eEEEEeccccccCC------CCCccchhhh
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-----RIVLVSSVGVTKFN------ELPWSIMNLF  219 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-----~~v~~SS~~~~~~~------~~~~~~~~~~  219 (333)
                      +|+|||+||..... ..+......+++|+.++.+++++++. +++     +||++||.++|+..      +.+..+.+.|
T Consensus       107 ~d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y  185 (381)
T 1n7h_A          107 PDEVYNLAAQSHVA-VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPY  185 (381)
T ss_dssp             CSEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHH
T ss_pred             CCEEEECCcccCcc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCch
Confidence            69999999975311 01223345678999999999998854 554     99999999999742      2334455667


Q ss_pred             HHHHHHHHHHHHHH----hcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhh-cccceeecCCCCcccccccHHHHH
Q 019935          220 GVLKYKKMGEDFVQ----KSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATA-GERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       220 ~~~k~k~~~e~~l~----~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +.  +|..+|.+++    +.|++++++|+..+ +||.....     +..++..+. +......+++++..++|+|++|+|
T Consensus       186 ~~--sK~~~E~~~~~~~~~~~~~~~~~r~~~~-~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva  262 (381)
T 1n7h_A          186 AA--SKCAAHWYTVNYREAYGLFACNGILFNH-ESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  262 (381)
T ss_dssp             HH--HHHHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             HH--HHHHHHHHHHHHHHHhCCcEEEEEeCce-eCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHH
Confidence            74  4555665554    45899999999865 67764321     122222222 222334567888899999999999


Q ss_pred             HHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          290 EACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       290 ~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++.+++++.  +++||+++|       ..++|.|+++.+++
T Consensus       263 ~a~~~~~~~~~--~~~~~i~~~-------~~~s~~e~~~~i~~  296 (381)
T 1n7h_A          263 EAMWLMLQQEK--PDDYVVATE-------EGHTVEEFLDVSFG  296 (381)
T ss_dssp             HHHHHHHTSSS--CCEEEECCS-------CEEEHHHHHHHHHH
T ss_pred             HHHHHHHhCCC--CCeEEeeCC-------CCCcHHHHHHHHHH
Confidence            99999998764  479999985       77999999998864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.96  E-value=3.5e-30  Score=234.49  Aligned_cols=234  Identities=21%  Similarity=0.259  Sum_probs=156.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +|+||||||+||||++|+++|+++|++|++++|+.+.....   .......+++++.+|++|++++. ++++++|+|||+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFE-APIAGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSH-HHHTTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHH-HHHcCCCEEEEe
Confidence            57999999999999999999999999999999986542211   00001346889999999999999 889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CC-CCeEEEEecccc-ccC---------CCCCcc------ch----
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGV-TKF---------NELPWS------IM----  216 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~-~~~~v~~SS~~~-~~~---------~~~~~~------~~----  216 (333)
                      |+....  ...+....++++|+.|+.+++++++ .+ ++||||+||.++ ++.         .+..+.      +.    
T Consensus        88 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  165 (338)
T 2rh8_A           88 ATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT  165 (338)
T ss_dssp             SSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred             CCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence            986532  1112223488999999999999874 44 899999999874 211         011100      11    


Q ss_pred             hhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcchHHHH----HHhhcccceeecCCC------Cccccc
Q 019935          217 NLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYDLNTLL----KATAGERRAVLMGQG------DKLIGE  282 (333)
Q Consensus       217 ~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~  282 (333)
                      ..|+.+|  ..+|.++    +++|++++++||+.+ |||..........    ....+.. . .++..      +...+|
T Consensus       166 ~~Y~~sK--~~~E~~~~~~~~~~gi~~~~lrp~~v-~Gp~~~~~~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~  240 (338)
T 2rh8_A          166 WGYPASK--TLAEKAAWKFAEENNIDLITVIPTLM-AGSSLTSDVPSSIGLAMSLITGNE-F-LINGMKGMQMLSGSVSI  240 (338)
T ss_dssp             CCCTTSC--CHHHHHHHHHHHHHTCCEEEEEECEE-ESCCSSSSCCHHHHHHHHHHHTCH-H-HHHHHHHHHHHHSSEEE
T ss_pred             chHHHHH--HHHHHHHHHHHHHcCCcEEEEeCCce-ECCCCCCCCCchHHHHHHHHcCCc-c-ccccccccccccCcccE
Confidence            1366544  3444433    456999999999955 8887543222111    1112211 1 11111      122379


Q ss_pred             ccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          283 VSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       283 i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +|++|+|++++.+++++.. +..|++.+        ...++.|+++.+++
T Consensus       241 i~v~Dva~a~~~~~~~~~~-~~~~~~~~--------~~~s~~e~~~~l~~  281 (338)
T 2rh8_A          241 AHVEDVCRAHIFVAEKESA-SGRYICCA--------ANTSVPELAKFLSK  281 (338)
T ss_dssp             EEHHHHHHHHHHHHHCTTC-CEEEEECS--------EEECHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHcCCCc-CCcEEEec--------CCCCHHHHHHHHHH
Confidence            9999999999999987544 44688765        45799999998864

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=9.1e-30  Score=227.88  Aligned_cols=221  Identities=18%  Similarity=0.183  Sum_probs=162.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      |+|||||||||||++|+++|+++||+|++++|++.+.          .   +..|-.+    . +.++++|+|||+|+..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~~~~----~-~~l~~~d~vihla~~~   62 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWDELA----A-SGLPSCDAAVNLAGEN   62 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHHHHH----H-HCCCSCSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecchhh----H-hhccCCCEEEEeccCc
Confidence            5899999999999999999999999999999976432          1   1222111    2 4567899999999854


Q ss_pred             CCC-CCCCCC--CCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccC-------CCCCccchhhhHHHHHHHHHH
Q 019935          163 AFP-SRRWDG--DNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       163 ~~~-~~~~~~--~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      ... ...|..  ...+.+.|+.++.+++++++.   ..++||++||.++|+.       ++.+..+.+.|+..+.+.+.+
T Consensus        63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH
Confidence            211 111221  123567799999999997632   4567999999999984       334445556666666666666


Q ss_pred             HHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          230 DFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       230 ~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                      ......+++++++||+ .++|+.++. +..+..... ......++++++.++|||++|+|++++.+++++.. .++||++
T Consensus       143 ~~~~~~~~~~~~~r~~-~v~g~~~~~-~~~~~~~~~-~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~-~g~yn~~  218 (298)
T 4b4o_A          143 ARLPGDSTRQVVVRSG-VVLGRGGGA-MGHMLLPFR-LGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHV-HGVLNGV  218 (298)
T ss_dssp             HCCSSSSSEEEEEEEC-EEECTTSHH-HHHHHHHHH-TTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC-CEEEEES
T ss_pred             HHhhccCCceeeeeee-eEEcCCCCc-hhHHHHHHh-cCCcceecccCceeecCcHHHHHHHHHHHHhCCCC-CCeEEEE
Confidence            5666779999999999 558887643 444444333 23445678999999999999999999999998765 4599999


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++       +.+|++|+++.+++
T Consensus       219 ~~-------~~~t~~e~~~~ia~  234 (298)
T 4b4o_A          219 AP-------SSATNAEFAQTFGA  234 (298)
T ss_dssp             CS-------CCCBHHHHHHHHHH
T ss_pred             CC-------CccCHHHHHHHHHH
Confidence            94       77999999998875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.96  E-value=7.4e-29  Score=238.28  Aligned_cols=224  Identities=14%  Similarity=0.072  Sum_probs=164.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|+||||||+||||++|++.|+++|++|++++|+..+..            .+.+|+.+  .+. +.++++|+|||+|+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~--~~~-~~l~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLN--PAS-DLLDGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTS--CCT-TTTTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccc--hhH-HhcCCCCEEEECCCC
Confidence            679999999999999999999999999999999875432            25678764  345 678899999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHh-cC-CCCCeEEEEecccccc-C-------CCCCccchhhhHHHHHHHH-HHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSA-LP-SSLKRIVLVSSVGVTK-F-------NELPWSIMNLFGVLKYKKM-GED  230 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a-~~-~~~~~~v~~SS~~~~~-~-------~~~~~~~~~~~~~~k~k~~-~e~  230 (333)
                      .............++++|+.++.+++++ ++ .++++|||+||.++|+ .       ++.+. +.+.|+..+.+.+ +..
T Consensus       212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTH
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHH
Confidence            5422111122334678899999999998 54 4789999999999997 2       22222 4556664443321 223


Q ss_pred             HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          231 FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       231 ~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      ++++.|++++++||+.+ ||+..+ .+..+...+. ......+++++..++|+|++|+|++++.++.++.. +.+||+++
T Consensus       291 ~~~~~gi~~~ilRp~~v-~Gp~~~-~~~~~~~~~~-~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~g~~ni~~  366 (516)
T 3oh8_A          291 PASDAGKRVAFIRTGVA-LSGRGG-MLPLLKTLFS-TGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI-SGPINAVA  366 (516)
T ss_dssp             HHHHTTCEEEEEEECEE-EBTTBS-HHHHHHHTTC----CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC-CEEEEESC
T ss_pred             HHHhCCCCEEEEEeeEE-ECCCCC-hHHHHHHHHH-hCCCcccCCCCceEceEeHHHHHHHHHHHHhCccc-CCcEEEEC
Confidence            44577999999999955 788753 3444444333 22234678888999999999999999999998654 45899999


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +       ..++|.|+++.+++
T Consensus       367 ~-------~~~s~~el~~~i~~  381 (516)
T 3oh8_A          367 P-------NPVSNADMTKILAT  381 (516)
T ss_dssp             S-------CCEEHHHHHHHTTC
T ss_pred             C-------CCCCHHHHHHHHHH
Confidence            5       77999999999875

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.96  E-value=2.3e-29  Score=231.22  Aligned_cols=229  Identities=20%  Similarity=0.235  Sum_probs=170.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-----CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC---Cc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG---VT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~---~d  153 (333)
                      +|+||||||+||||++|+++|+++|     ++|++++|+..... .    ...+++++.+|++|++++. +++++   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~----~~~~~~~~~~Dl~d~~~~~-~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H----EDNPINYVQCDISDPDDSQ-AKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C----CSSCCEEEECCTTSHHHHH-HHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c----ccCceEEEEeecCCHHHHH-HHHhcCCCCC
Confidence            3689999999999999999999999     99999999876543 1    1457899999999999898 78887   99


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEE-------EEeccccccCCC---CCc------c
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIV-------LVSSVGVTKFNE---LPW------S  214 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v-------~~SS~~~~~~~~---~~~------~  214 (333)
                      +|||+|+...      .+....+++|+.++.+++++++.   ++++||       |+||.++|+...   .++      .
T Consensus        75 ~vih~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~  148 (364)
T 2v6g_A           75 HVFYVTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL  148 (364)
T ss_dssp             EEEECCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCC
T ss_pred             EEEECCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCC
Confidence            9999999752      23345788999999999998854   689998       799999887531   121      1


Q ss_pred             c-hhhhHHHHHHHHHHHHHHhcC-CCEEEEEcccccCCCCCCcc----hHH-HHHHh--hcccceeecCCCC---ccccc
Q 019935          215 I-MNLFGVLKYKKMGEDFVQKSG-LPFTIIRAGRLTDGPYTSYD----LNT-LLKAT--AGERRAVLMGQGD---KLIGE  282 (333)
Q Consensus       215 ~-~~~~~~~k~k~~~e~~l~~~g-i~~~~vrpg~~~~g~~~~~~----~~~-~~~~~--~~~~~~~~~~~~~---~~~~~  282 (333)
                      + .+.|  ...+..++++.++.| ++++++||+.+ ||+.....    ... +...+  ..+....++++++   ...++
T Consensus       149 ~~~~~y--~~~E~~~~~~~~~~~~~~~~ilRp~~v-~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~  225 (364)
T 2v6g_A          149 KYMNFY--YDLEDIMLEEVEKKEGLTWSVHRPGNI-FGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDC  225 (364)
T ss_dssp             SSCCHH--HHHHHHHHHHHTTSTTCEEEEEEESSE-ECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCC
T ss_pred             ccchhh--HHHHHHHHHHhhcCCCceEEEECCCce-eCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCC
Confidence            1 2334  334444555545566 99999999955 78865421    122 22333  1233344466653   34678


Q ss_pred             ccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          283 VSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       283 i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++|+|++++.+++++...+++||++++       ...++.|+++.+++
T Consensus       226 ~~v~Dva~a~~~~~~~~~~~g~~~ni~~~-------~~~s~~e~~~~i~~  268 (364)
T 2v6g_A          226 SDADLIAEHHIWAAVDPYAKNEAFNVSNG-------DVFKWKHFWKVLAE  268 (364)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTEEEEECCS-------CCBCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHhCCCCCCceEEecCC-------CcCCHHHHHHHHHH
Confidence            88899999999999887656889999985       66999999998864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=4e-29  Score=220.32  Aligned_cols=195  Identities=19%  Similarity=0.180  Sum_probs=156.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|+||||||+||||++++++|+++|++|++++|++.+..       ..+++++.+|++|+++++ ++++++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~-~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVN-AMVAGCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHH-HHHTTCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHH-HHHcCCCEEEECCC
Confidence            3578999999999999999999999999999999875543       467899999999999999 89999999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccC--------CCCCccchhhhHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF--------NELPWSIMNLFGVLKYKKMGEDF  231 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~--------~~~~~~~~~~~~~~k~k~~~e~~  231 (333)
                      ...     .++....+++|+.|+.+++++++ .++++||++||.++++.        ++.+..+.+.|+.+|.  .+|.+
T Consensus        74 ~~~-----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~--~~e~~  146 (267)
T 3rft_A           74 ISV-----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKC--FGENL  146 (267)
T ss_dssp             CCS-----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHH--HHHHH
T ss_pred             CcC-----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHH--HHHHH
Confidence            842     23334578999999999999874 47899999999999862        2245556677776654  44433


Q ss_pred             ----HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEE
Q 019935          232 ----VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYE  307 (333)
Q Consensus       232 ----l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~  307 (333)
                          .++.|+++++|||+.+ +++.                     .++....+|++++|+++++..++..+...+.+++
T Consensus       147 ~~~~a~~~g~~~~~vr~~~v-~~~~---------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~  204 (267)
T 3rft_A          147 ARMYFDKFGQETALVRIGSC-TPEP---------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVW  204 (267)
T ss_dssp             HHHHHHHHCCCEEEEEECBC-SSSC---------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEE
T ss_pred             HHHHHHHhCCeEEEEEeecc-cCCC---------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEE
Confidence                3467999999999966 4432                     2345567899999999999999998776566788


Q ss_pred             ecCCC
Q 019935          308 INSVE  312 (333)
Q Consensus       308 v~~g~  312 (333)
                      +.+++
T Consensus       205 ~~s~~  209 (267)
T 3rft_A          205 GASAN  209 (267)
T ss_dssp             ECCCC
T ss_pred             EeCCC
Confidence            87764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=2e-29  Score=225.77  Aligned_cols=221  Identities=18%  Similarity=0.197  Sum_probs=167.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhh--hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +|+||||||||+||++++++|+++| ++|++++|++++..  .+.    ..+++++.+|++|++++. ++++++|+|||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----~~~~~~~~~D~~d~~~l~-~~~~~~d~vi~~   79 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----LQGAEVVQGDQDDQVIME-LALNGAYATFIV   79 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----HTTCEEEECCTTCHHHHH-HHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----HCCCEEEEecCCCHHHHH-HHHhcCCEEEEe
Confidence            4789999999999999999999998 99999999876542  222    357899999999999999 899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCC
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi  237 (333)
                      ++....         ...+.|+.++.+++++++. ++++||++|+.++++..+..  +...|+  ..|..+|+++++.|+
T Consensus        80 a~~~~~---------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~--~~~~y~--~sK~~~e~~~~~~gi  146 (299)
T 2wm3_A           80 TNYWES---------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR--LAAAHF--DGKGEVEEYFRDIGV  146 (299)
T ss_dssp             CCHHHH---------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTS--CCCHHH--HHHHHHHHHHHHHTC
T ss_pred             CCCCcc---------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCc--ccCchh--hHHHHHHHHHHHCCC
Confidence            985320         1245788899999998854 89999998887776532211  123344  678889999999999


Q ss_pred             CEEEEEcccccCCCCCCcchHHHHHHhhcccc-eeecCCCCcccccccHHHHHHHHHHhccCcc-cCCcEEEecCCCCCC
Q 019935          238 PFTIIRAGRLTDGPYTSYDLNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAEACIQALDIEF-TEGEIYEINSVEGEG  315 (333)
Q Consensus       238 ~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~v~~g~~~~  315 (333)
                      +++++||+.+ +|+.......   .....+.. ...++.++..++|++++|+|++++.++.++. ..|++|++++     
T Consensus       147 ~~~ilrp~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-----  217 (299)
T 2wm3_A          147 PMTSVRLPCY-FENLLSHFLP---QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-----  217 (299)
T ss_dssp             CEEEEECCEE-GGGGGTTTCC---EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-----
T ss_pred             CEEEEeecHH-hhhchhhcCC---cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-----
Confidence            9999999966 5543211000   00111111 2234456778899999999999999998753 4578999986     


Q ss_pred             CCCCcccHHHHHHHHhc
Q 019935          316 PGSDPQKWRELFKAAKA  332 (333)
Q Consensus       316 ~~~~~~s~~e~~~~i~~  332 (333)
                         +.+++.|+++.+++
T Consensus       218 ---~~~s~~e~~~~~~~  231 (299)
T 2wm3_A          218 ---CRHTAEEYAALLTK  231 (299)
T ss_dssp             ---EEECHHHHHHHHHH
T ss_pred             ---ccCCHHHHHHHHHH
Confidence               56999999998865

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.96  E-value=1.6e-28  Score=226.32  Aligned_cols=202  Identities=17%  Similarity=0.147  Sum_probs=161.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+|||||||||||++|+++|+++|+ +|++++|+                       .|+++++ ++++++|+|||+|+.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~-~~~~~~d~Vih~a~~   56 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELE-SALLKADFIVHLAGV   56 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHH-HHHHHCSEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHH-HHhccCCEEEECCcC
Confidence            4899999999999999999999998 88877664                       4566777 788899999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHh----c
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK----S  235 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~----~  235 (333)
                      ...     ......+++|+.++.+++++++. +++ +||++||.++++        .+.|+  .+|..+|+++++    .
T Consensus        57 ~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------~~~Y~--~sK~~~E~~~~~~~~~~  121 (369)
T 3st7_A           57 NRP-----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------DNPYG--ESKLQGEQLLREYAEEY  121 (369)
T ss_dssp             BCT-----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------CSHHH--HHHHHHHHHHHHHHHHH
T ss_pred             CCC-----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------CCCch--HHHHHHHHHHHHHHHHh
Confidence            642     24466889999999999998865 776 999999999986        34566  556667777655    7


Q ss_pred             CCCEEEEEcccccCCCCCCc----chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccC-CcEEEecC
Q 019935          236 GLPFTIIRAGRLTDGPYTSY----DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE-GEIYEINS  310 (333)
Q Consensus       236 gi~~~~vrpg~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~-g~~~~v~~  310 (333)
                      |++++++||+.+ +|+....    .+..+...+..+... .+++++..++|+|++|+|++++.++.++... +++||+++
T Consensus       122 g~~~~i~R~~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~  199 (369)
T 3st7_A          122 GNTVYIYRWPNL-FGKWCKPNYNSVIATFCYKIARNEEI-QVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPN  199 (369)
T ss_dssp             CCCEEEEEECEE-ECTTCCTTSSCHHHHHHHHHHTTCCC-CCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSC
T ss_pred             CCCEEEEECCce-eCCCCCCCcchHHHHHHHHHHcCCCe-EecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCC
Confidence            999999999955 7876532    244555555544443 3457888899999999999999999987654 78999998


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +       ...+|.|+++.+++
T Consensus       200 ~-------~~~s~~e~~~~~~~  214 (369)
T 3st7_A          200 V-------FKVTLGEIVDLLYK  214 (369)
T ss_dssp             C-------EEEEHHHHHHHHHH
T ss_pred             C-------CceeHHHHHHHHHH
Confidence            4       78999999999875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=1e-28  Score=245.71  Aligned_cols=241  Identities=20%  Similarity=0.212  Sum_probs=172.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh----hhhccCCCCceEEEEccCCCcCCCchhhhc--CC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT----TLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~  152 (333)
                      .+++|+||||||+||||++|+++|+++|++|++++|+.....    .+.. ....+++++.+|++|+++++ ++++  ++
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~v~~v~~Dl~d~~~l~-~~~~~~~~   85 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV-LTKHHIPFYEVDLCDRKGLE-KVFKEYKI   85 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHH-HHTSCCCEEECCTTCHHHHH-HHHHHSCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhh-ccCCceEEEEcCCCCHHHHH-HHHHhCCC
Confidence            356789999999999999999999999999999999754321    1110 01457889999999999988 7787  89


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC-----------CCCccchhhhH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN-----------ELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~-----------~~~~~~~~~~~  220 (333)
                      |+|||+|+...... ........+++|+.++.++++++++ ++++||++||.++|+..           +.+..+.+.|+
T Consensus        86 D~Vih~A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~  164 (699)
T 1z45_A           86 DSVIHFAGLKAVGE-STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG  164 (699)
T ss_dssp             CEEEECCSCCCHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred             CEEEECCcccCcCc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence            99999999753110 0112234678999999999998854 88999999999998632           12233445666


Q ss_pred             HHHHHHHHHHHHHh------cCCCEEEEEcccccCCCCCC------------cchHHHHHHhhcc-cceeecC------C
Q 019935          221 VLKYKKMGEDFVQK------SGLPFTIIRAGRLTDGPYTS------------YDLNTLLKATAGE-RRAVLMG------Q  275 (333)
Q Consensus       221 ~~k~k~~~e~~l~~------~gi~~~~vrpg~~~~g~~~~------------~~~~~~~~~~~~~-~~~~~~~------~  275 (333)
                        .+|..+|.+++.      .|++++++||+.+ ||+...            ..+..+.....+. ..+.+++      +
T Consensus       165 --~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~v-yG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (699)
T 1z45_A          165 --HTKYAIENILNDLYNSDKKSWKFAILRYFNP-IGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD  241 (699)
T ss_dssp             --HHHHHHHHHHHHHHHHSTTSCEEEEEEECEE-ECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CC
T ss_pred             --HHHHHHHHHHHHHHHhccCCCcEEEEEeccc-cCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCC
Confidence              556667766643      6899999999955 676421            1123333333322 3344455      5


Q ss_pred             CCcccccccHHHHHHHHHHhccCc------ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIE------FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~------~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++..++|+|++|+|++++.+++..      ...+++||++++       ..+++.|+++.+++
T Consensus       242 g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~-------~~~s~~el~~~i~~  297 (699)
T 1z45_A          242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-------KGSTVFEVYHAFCK  297 (699)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             CCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-------CCCcHHHHHHHHHH
Confidence            778899999999999999998752      123579999985       67899999998864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.95  E-value=1e-28  Score=216.72  Aligned_cols=227  Identities=12%  Similarity=0.113  Sum_probs=163.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      .++.+|++|||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ ++++       
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g   81 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDVTRQDSID-AAIAATVEHAG   81 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHHHHHHSS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeCCCHHHHH-HHHHHHHHHcC
Confidence            3567789999999999999999999999999999999988776654433 457889999999999887 5554       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++.     ++ .++||++||..++.    +......|+.
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  157 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR----GEALVAIYCA  157 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc----CCCCChHHHH
Confidence            8999999999864211   1122233467799999999999662     12 46999999998875    4455667776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh---cccceeecCCCCcccccccHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA---GERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +|..     +.+...+...|+++++|+||.+ +++..... ..+.....   .......+.+..+..++++++|+|++++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  235 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVV-DGEHWDGV-DALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAI  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CSTTHHHH-HHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCC-ccchhhhh-hhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence            6642     3333445567999999999955 66653221 11111111   1111122334456678999999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++....  ..|++|++++|.
T Consensus       236 ~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          236 FLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             HTTSGGGTTCCSCEEEESTTS
T ss_pred             HHhCCccCCCCCCEEEECcCh
Confidence            9998754  348999999974

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.95  E-value=1.7e-29  Score=215.15  Aligned_cols=199  Identities=20%  Similarity=0.171  Sum_probs=154.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|+||||||+|+||++++++|+++|+  +|++++|++++    .    ..+++++.+|++|++++. +++  +|+||||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~----~~~~~~~~~D~~~~~~~~-~~~--~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----E----HPRLDNPVGPLAELLPQL-DGS--IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----C----CTTEECCBSCHHHHGGGC-CSC--CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----c----CCCceEEeccccCHHHHH-Hhh--hcEEEEC
Confidence            467999999999999999999999998  99999998765    1    457888999999999998 677  9999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCC
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi  237 (333)
                      ||....   ........+++|+.++.+++++++ .++++||++||.++++.      +.+.|+  ..|..+|++++..|+
T Consensus        73 a~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------~~~~y~--~sK~~~e~~~~~~~~  141 (215)
T 2a35_A           73 LGTTIK---EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------SSIFYN--RVKGELEQALQEQGW  141 (215)
T ss_dssp             CCCCHH---HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------CSSHHH--HHHHHHHHHHTTSCC
T ss_pred             eeeccc---cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------CccHHH--HHHHHHHHHHHHcCC
Confidence            997531   122334567899999999999875 48899999999999862      223454  678889999999999


Q ss_pred             C-EEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          238 P-FTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       238 ~-~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      + ++++||+.+ +|+.....+.   ..+..  ....+++  ..+++++++|+|++++.+++++.  +++|+++++
T Consensus       142 ~~~~~vrp~~v-~g~~~~~~~~---~~~~~--~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~--~~~~~i~~~  206 (215)
T 2a35_A          142 PQLTIARPSLL-FGPREEFRLA---EILAA--PIARILP--GKYHGIEACDLARALWRLALEEG--KGVRFVESD  206 (215)
T ss_dssp             SEEEEEECCSE-ESTTSCEEGG---GGTTC--CCC------CHHHHHHHHHHHHHHHHHHTCCC--SEEEEEEHH
T ss_pred             CeEEEEeCcee-eCCCCcchHH---HHHHH--hhhhccC--CCcCcEeHHHHHHHHHHHHhcCC--CCceEEcHH
Confidence            9 999999955 7876542211   11111  1111222  26789999999999999999865  679999984

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=1.2e-27  Score=207.09  Aligned_cols=199  Identities=24%  Similarity=0.253  Sum_probs=144.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .++|+||||||+|+||++++++|+++| ++|++++|++++...+.    ..+++++.+|++|+++++ ++++++|+||||
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~----~~~~~~~~~Dl~d~~~~~-~~~~~~D~vv~~   95 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY----PTNSQIIMGDVLNHAALK-QAMQGQDIVYAN   95 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC----CTTEEEEECCTTCHHHHH-HHHTTCSEEEEE
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc----cCCcEEEEecCCCHHHHH-HHhcCCCEEEEc
Confidence            456899999999999999999999999 99999999987765543    568999999999999999 899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCc---cchhhhHHHHHHHHHHHHHHh
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW---SIMNLFGVLKYKKMGEDFVQK  234 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~---~~~~~~~~~k~k~~~e~~l~~  234 (333)
                      ++...               ....+.+++++++ .++++||++||.++|+.....+   .......+...+..+|+++++
T Consensus        96 a~~~~---------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  160 (236)
T 3qvo_A           96 LTGED---------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEA  160 (236)
T ss_dssp             CCSTT---------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHT
T ss_pred             CCCCc---------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHH
Confidence            98521               1135678888774 4889999999999987432211   111111122334556788889


Q ss_pred             cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCc-ccccccHHHHHHHHHHhccCcc-cCCcEEEecCCC
Q 019935          235 SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDK-LIGEVSRIVVAEACIQALDIEF-TEGEIYEINSVE  312 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~v~~g~  312 (333)
                      .|+++++||||.+. ++....              ......+.. ...+++++|+|++++++++++. ..++.|++++++
T Consensus       161 ~gi~~~~vrPg~i~-~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          161 SGLEYTILRPAWLT-DEDIID--------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             SCSEEEEEEECEEE-CCSCCC--------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             CCCCEEEEeCCccc-CCCCcc--------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            99999999999664 432211              011111222 2468999999999999999977 568999999865


Q ss_pred             C
Q 019935          313 G  313 (333)
Q Consensus       313 ~  313 (333)
                      .
T Consensus       226 ~  226 (236)
T 3qvo_A          226 T  226 (236)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.95  E-value=7.4e-28  Score=213.22  Aligned_cols=234  Identities=11%  Similarity=0.093  Sum_probs=166.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.+..+.+..... ..++.++.+|++|+++++ ++++       
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   91 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVR-NLVDTTIAKHG   91 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHH-HHHHHHHHHcC
Confidence            4677899999999999999999999999999999998766554432221 237899999999999887 5554       


Q ss_pred             CCcEEEEcCCCCCCCCCCC-----CCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCcc-chhhh
Q 019935          151 GVTHVICCTGTTAFPSRRW-----DGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWS-IMNLF  219 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~-~~~~~  219 (333)
                      ++|+||||||........+     +.....+++|+.++.++++++.     .+.++||++||..++..    .. ....|
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~~Y  167 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA----GEGVSHVY  167 (278)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC----CTTSCHHH
T ss_pred             CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCC----CCCCCcch
Confidence            8999999999754211111     1223467889999999998662     35789999999998762    22 34567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +.+|..     +.+...+...|+++++||||.+ +++......   ..+.......       .......+++++|+|++
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~dva~~  239 (278)
T 2bgk_A          168 TATKHAVLGLTTSLCTELGEYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQ-------AANLKGTLLRAEDVADA  239 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC-SCCCCTTSSSCCHHHHHHHHHH-------TCSSCSCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEecee-cchhhhhhcccchhHHHHhhhc-------ccccccccCCHHHHHHH
Confidence            655532     2222333457999999999955 777643211   1111111100       11234568999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++.++.  ..|+.|++++|       ...++.|+++.+++
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gg-------~~~~~~e~~~~i~~  275 (278)
T 2bgk_A          240 VAYLAGDESKYVSGLNLVIDGG-------YTRTNPAFPTALKH  275 (278)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT-------GGGCCTHHHHHSCS
T ss_pred             HHHHcCcccccCCCCEEEECCc-------ccccCCccchhhhh
Confidence            999998653  44899999996       66889999998865

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.95  E-value=1.4e-28  Score=211.36  Aligned_cols=213  Identities=13%  Similarity=0.044  Sum_probs=159.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---hcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~~~~d~vi  156 (333)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++.+...    ..++..+.+|++|+++++ ++   +.++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~-~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR----HPRIRREELDITDSQRLQ-RLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC----CTTEEEEECCTTCHHHHH-HHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh----cCCeEEEEecCCCHHHHH-HHHHhcCCCCEEE
Confidence            47899999999999999999999999999999999987665433    668899999999999887 54   45899999


Q ss_pred             EcCCCCCCC-CCCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH-----HH
Q 019935          157 CCTGTTAFP-SRRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KK  226 (333)
Q Consensus       157 ~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~  226 (333)
                      ||||..... +.+.++.+..+++|+.|++.+++++    +++-++||++||+....    +......|+.+|.     .+
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----~~~~~~~Y~asKaav~~ltr  159 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF----GSADRPAYSASKGAIVQLTR  159 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS----CCSSCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC----CCCCCHHHHHHHHHHHHHHH
Confidence            999976411 1112223447889999999999966    23347999999998865    4455566776664     56


Q ss_pred             HHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cC
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TE  302 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~  302 (333)
                      .+..++..+||++|.|.||.+ ..+......  ....+...         ...+...+..++|+|+++++++++..  ..
T Consensus       160 ~lA~Ela~~gIrVNaV~PG~i-~T~m~~~~~~~~~~~~~~~---------~~~PlgR~g~peeiA~~v~fLaSd~a~~iT  229 (242)
T 4b79_A          160 SLACEYAAERIRVNAIAPGWI-DTPLGAGLKADVEATRRIM---------QRTPLARWGEAPEVASAAAFLCGPGASFVT  229 (242)
T ss_dssp             HHHHHHGGGTEEEEEEEECSB-CCC-----CCCHHHHHHHH---------HTCTTCSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHhhhcCeEEEEEEeCCC-CChhhhcccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            777788889999999999954 666432211  11111111         12345578899999999999998865  44


Q ss_pred             CcEEEecCC
Q 019935          303 GEIYEINSV  311 (333)
Q Consensus       303 g~~~~v~~g  311 (333)
                      |+++.++||
T Consensus       230 G~~l~VDGG  238 (242)
T 4b79_A          230 GAVLAVDGG  238 (242)
T ss_dssp             SCEEEESTT
T ss_pred             CceEEECcc
Confidence            999999986

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.95  E-value=1.4e-28  Score=213.64  Aligned_cols=221  Identities=11%  Similarity=0.041  Sum_probs=162.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hhh
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AIF  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~~  149 (333)
                      +++++|++|||||+++||+++++.|+++|++|++++|++++.++..+++.  +.++.++.+|++|++++++      +.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999887766544332  5678899999999998872      234


Q ss_pred             cCCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|++|||||....  +  +.+.+..+..+++|+.|++++++++     +++-++||++||.....    +......|+
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~----~~~~~~~Y~  158 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR----GGFAGAPYT  158 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----SSSSCHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC----CCCCChHHH
Confidence            589999999997532  1  1122233457889999999999966     23567999999998865    444556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|.     .+.+..++..+||++++|.||.+ ..+......   ....+.....        ......+..++|+|+++
T Consensus       159 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~~~~~--------~~~~~R~g~pediA~~v  229 (254)
T 4fn4_A          159 VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTV-KTNIGLGSSKPSELGMRTLTKL--------MSLSSRLAEPEDIANVI  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSSCTTSCSSCCHHHHHHHHHH--------HTTCCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCC-CCcccccccCCcHHHHHHHHhc--------CCCCCCCcCHHHHHHHH
Confidence            6664     56777788889999999999955 555422111   1111111100        01234678899999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++..  ..|+++.++||
T Consensus       230 ~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          230 VFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhcCCcCCEEEeCCC
Confidence            99998765  45999999997

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=4.6e-29  Score=219.82  Aligned_cols=194  Identities=21%  Similarity=0.172  Sum_probs=149.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +|+||||||+||||++++++|+++|++|++++|++.+..       ..+++++.+|++|++++. ++++++|+|||||+.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~-~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVH-DLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHH-HHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHH-HHHcCCCEEEECCcC
Confidence            468999999999999999999999999999999875321       246788999999999998 889999999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC--------CCCccchhhhHHHHHHHHHHHHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~--------~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      ..     .......+++|+.++.+++++++ .++++||++||.++|+..        +.+..+.+.|+.  +|..+|.++
T Consensus        74 ~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~--sK~~~e~~~  146 (267)
T 3ay3_A           74 SV-----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL--SKCFGEDLA  146 (267)
T ss_dssp             CS-----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH--HHHHHHHHH
T ss_pred             CC-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH--HHHHHHHHH
Confidence            52     22234467899999999999875 488999999999988632        122334456664  455566554


Q ss_pred             ----HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEe
Q 019935          233 ----QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI  308 (333)
Q Consensus       233 ----~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v  308 (333)
                          ++.|++++++||+.++.++.                      ++....+|++++|+|++++.++.++...+++|++
T Consensus       147 ~~~~~~~gi~~~~lrp~~v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~  204 (267)
T 3ay3_A          147 SLYYHKFDIETLNIRIGSCFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYG  204 (267)
T ss_dssp             HHHHHTTCCCEEEEEECBCSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEE
T ss_pred             HHHHHHcCCCEEEEeceeecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEec
Confidence                35699999999997642211                      1223568999999999999999887554568888


Q ss_pred             cCCC
Q 019935          309 NSVE  312 (333)
Q Consensus       309 ~~g~  312 (333)
                      .++.
T Consensus       205 ~~~~  208 (267)
T 3ay3_A          205 ASAN  208 (267)
T ss_dssp             CCSC
T ss_pred             CCCc
Confidence            7653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=5e-28  Score=217.84  Aligned_cols=226  Identities=16%  Similarity=0.154  Sum_probs=162.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-----hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      +++||||||||+||++++++|+++|++|++++|+..     +.+.+.. ....+++++.+|++|++++. ++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~-~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLV-DALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHH-HHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHH-HHHhCCCEEE
Confidence            468999999999999999999999999999999843     2222211 01467899999999999999 8999999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CC-CCeEEEEeccccccCC-CCCccc-hhhhHHHHHHHHHHHHH
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFN-ELPWSI-MNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~-~~~~v~~SS~~~~~~~-~~~~~~-~~~~~~~k~k~~~e~~l  232 (333)
                      |+++....            +.|+.++.+++++++ .+ ++|||+ |+.+..... +.+..+ ...  | ..|..+|+++
T Consensus        82 ~~a~~~~~------------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~--y-~sK~~~e~~~  145 (313)
T 1qyd_A           82 SALAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSIT--F-IDKRKVRRAI  145 (313)
T ss_dssp             ECCCCSSS------------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHH--H-HHHHHHHHHH
T ss_pred             ECCccccc------------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcch--H-HHHHHHHHHH
Confidence            99986421            236778899999885 47 999996 443321111 112122 222  3 6788899999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCC
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      ++.|++++++||+.+ +++.....................+++++..++|++++|+|++++.++.++...++.|++.++ 
T Consensus       146 ~~~g~~~~ilrp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~-  223 (313)
T 1qyd_A          146 EAASIPYTYVSSNMF-AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPP-  223 (313)
T ss_dssp             HHTTCCBCEEECCEE-HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCG-
T ss_pred             HhcCCCeEEEEecee-ccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCC-
Confidence            999999999999955 332111000000000012233446677888899999999999999999987766888888762 


Q ss_pred             CCCCCCCcccHHHHHHHHhc
Q 019935          313 GEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       313 ~~~~~~~~~s~~e~~~~i~~  332 (333)
                           .+.+++.|+++.+++
T Consensus       224 -----~~~~s~~e~~~~~~~  238 (313)
T 1qyd_A          224 -----MNILSQKEVIQIWER  238 (313)
T ss_dssp             -----GGEEEHHHHHHHHHH
T ss_pred             -----CCccCHHHHHHHHHH
Confidence                 167999999998875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=3.4e-28  Score=218.36  Aligned_cols=221  Identities=16%  Similarity=0.200  Sum_probs=160.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-------chhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-------~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +++|+||||||+||++++++|+++|++|++++|++       ++.+.+.. ....+++++.+|++|++++. ++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~-~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDN-YQSLGVILLEGDINDHETLV-KAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHH-HHHTTCEEEECCTTCHHHHH-HHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHH-HHhCCCEEEEeCCCCHHHHH-HHHhCCCE
Confidence            46899999999999999999999999999999986       33332211 01357899999999999999 89999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCCCccc-hhhhHHHHHHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNELPWSI-MNLFGVLKYKKMGEDF  231 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~~~~~-~~~~~~~k~k~~~e~~  231 (333)
                      |||+++...                +.++.+++++++. + ++|||+ |+.+....+..+..+ .+.  | ..|..+|++
T Consensus        80 vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~--y-~sK~~~e~~  139 (307)
T 2gas_A           80 VICAAGRLL----------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQV--F-EEKASIRRV  139 (307)
T ss_dssp             EEECSSSSC----------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHH--H-HHHHHHHHH
T ss_pred             EEECCcccc----------------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhH--H-HHHHHHHHH
Confidence            999998631                3467899998854 7 999984 433322122112222 222  3 678889999


Q ss_pred             HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          232 VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       232 l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      +++.|++++++|||.+ ++......... ............+++++..+++++++|+|++++.++.++...++.+++.++
T Consensus       140 ~~~~~i~~~~lrp~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~  217 (307)
T 2gas_A          140 IEAEGVPYTYLCCHAF-TGYFLRNLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLP  217 (307)
T ss_dssp             HHHHTCCBEEEECCEE-TTTTGGGTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCG
T ss_pred             HHHcCCCeEEEEccee-ecccccccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCC
Confidence            9999999999999955 44432111000 000112334456677888899999999999999999987666888888762


Q ss_pred             CCCCCCCCcccHHHHHHHHhc
Q 019935          312 EGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       312 ~~~~~~~~~~s~~e~~~~i~~  332 (333)
                            .+.++++|+++.+++
T Consensus       218 ------~~~~s~~e~~~~~~~  232 (307)
T 2gas_A          218 ------KNYLTQNEVIALWEK  232 (307)
T ss_dssp             ------GGEEEHHHHHHHHHH
T ss_pred             ------CCcCCHHHHHHHHHH
Confidence                  167999999998875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=9e-27  Score=199.36  Aligned_cols=197  Identities=20%  Similarity=0.243  Sum_probs=149.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      |+|+||||||+|+||++++++|+ +.|++|++++|+++ +.+.+...  ..+++++.+|++|+++++ ++++++|+||||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~-~~~~~~d~vv~~   80 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID--HERVTVIEGSFQNPGXLE-QAVTNAEVVFVG   80 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHT--STTEEEEECCTTCHHHHH-HHHTTCSEEEES
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccC--CCceEEEECCCCCHHHHH-HHHcCCCEEEEc
Confidence            45679999999999999999999 89999999999988 66655211  678999999999999999 899999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccc---hhhh-HHHHHHHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSI---MNLF-GVLKYKKMGEDFVQ  233 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~---~~~~-~~~k~k~~~e~~l~  233 (333)
                      ||..                |+. +.+++++++ .+++|||++||.++++........   .... .|...|..+|.+++
T Consensus        81 ag~~----------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~  143 (221)
T 3r6d_A           81 AMES----------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLR  143 (221)
T ss_dssp             CCCC----------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCCC----------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence            9852                455 889999875 488999999999998632211100   0000 46677889999999


Q ss_pred             hcCCCEEEEEcccccCCC-CCCcchHHHHHHhhcccceeecCCCCc-ccccccHHHHHHHHHHhc--cCcc-cCCcEEEe
Q 019935          234 KSGLPFTIIRAGRLTDGP-YTSYDLNTLLKATAGERRAVLMGQGDK-LIGEVSRIVVAEACIQAL--DIEF-TEGEIYEI  308 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a~~~~l--~~~~-~~g~~~~v  308 (333)
                      +.|+++++||||.+ +++ ...              .......... ...+++++|+|+++++++  +++. ..++.+.+
T Consensus       144 ~~~i~~~~vrpg~v-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i  208 (221)
T 3r6d_A          144 ESNLNYTILRLTWL-YNDPEXT--------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV  208 (221)
T ss_dssp             HSCSEEEEEEECEE-ECCTTCC--------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred             hCCCCEEEEechhh-cCCCCCc--------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence            99999999999976 444 211              1111111112 234899999999999999  8766 45788888


Q ss_pred             cCCC
Q 019935          309 NSVE  312 (333)
Q Consensus       309 ~~g~  312 (333)
                      .++.
T Consensus       209 ~~~~  212 (221)
T 3r6d_A          209 GEPG  212 (221)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            8643

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=9.7e-28  Score=206.53  Aligned_cols=220  Identities=13%  Similarity=0.062  Sum_probs=160.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhh--cCC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGV  152 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--~~~  152 (333)
                      .+++++|++|||||+++||+++++.|+++|++|++.+|+..+  .+.+.+.  +.++..+.+|++|+++++ +.+  .++
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~-~~~~~g~i   80 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKD--GGNASALLIDFADPLAAK-DSFTDAGF   80 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTSTTTTT-TSSTTTCC
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHh--CCcEEEEEccCCCHHHHH-HHHHhCCC
Confidence            357899999999999999999999999999999999998542  2222221  667899999999999988 555  479


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |++|||||......   ...++.+..+++|+.|++++++++     +++ -++||++||.....    +......|+.+|
T Consensus        81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~----g~~~~~~Y~asK  156 (247)
T 4hp8_A           81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ----GGIRVPSYTAAK  156 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCSSCHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC----CCCCChHHHHHH
Confidence            99999999865221   112223447889999999999964     223 47999999998865    444555677666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.+..++..+||++|.|.||.+ ..+....    +..   .......+....+...+..++|+|.++++++++
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i-~T~~~~~----~~~---~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd  228 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYI-ETNNTEA----LRA---DAARNKAILERIPAGRWGHSEDIAGAAVFLSSA  228 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSGGGHH----HHT---SHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCC-CCcchhh----ccc---CHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence            3     56777888899999999999955 5543211    100   000000111234556788999999999999988


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+++.++||
T Consensus       229 ~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          229 AADYVHGAILNVDGG  243 (247)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCcCCeEEECcc
Confidence            65  44999999986

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=8.7e-28  Score=220.01  Aligned_cols=217  Identities=16%  Similarity=0.097  Sum_probs=163.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhhhccCCCCceEEEEcc-CCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D-~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +|+|||||||||||++|+++|+++|++|++++|++++.  +.+..   ..+++++.+| ++|++++. ++++++|+||||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~---~~~v~~v~~D~l~d~~~l~-~~~~~~d~Vi~~   80 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMD-TLFEGAHLAFIN   80 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHH-HHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh---cCCcEEEECCccCCHHHHH-HHHhcCCEEEEc
Confidence            57899999999999999999999999999999987654  33321   3478999999 99999999 889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccc--cccCCCCCccchhhhHHHHHHHHHHHHHHh
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVG--VTKFNELPWSIMNLFGVLKYKKMGEDFVQK  234 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~--~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~  234 (333)
                      ++...            .+.|..+ .++++++++ + +++||++||.+  .++.     .+...|+  .+|..+|+++++
T Consensus        81 a~~~~------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----~~~~~y~--~sK~~~E~~~~~  140 (352)
T 1xgk_A           81 TTSQA------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----WPAVPMW--APKFTVENYVRQ  140 (352)
T ss_dssp             CCSTT------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----CCCCTTT--HHHHHHHHHHHT
T ss_pred             CCCCC------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----CCCccHH--HHHHHHHHHHHH
Confidence            97421            2457776 999998854 7 99999999986  3331     1223455  678889999999


Q ss_pred             cCCCEEEEEcccccCCCCCCcchHHHHHHh-hcccce--eecCCCCcccccccH-HHHHHHHHHhccCcc--cCCcEEEe
Q 019935          235 SGLPFTIIRAGRLTDGPYTSYDLNTLLKAT-AGERRA--VLMGQGDKLIGEVSR-IVVAEACIQALDIEF--TEGEIYEI  308 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~i~v-~Dva~a~~~~l~~~~--~~g~~~~v  308 (333)
                      .|+++++|||+ + +|+........+.... ......  ..+++++..++++++ +|+|++++.++.++.  ..+++|++
T Consensus       141 ~gi~~~ivrpg-~-~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l  218 (352)
T 1xgk_A          141 LGLPSTFVYAG-I-YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL  218 (352)
T ss_dssp             SSSCEEEEEEC-E-EGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEE
T ss_pred             cCCCEEEEecc-e-ecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEE
Confidence            99999999998 4 3444321111111000 112222  235667788899999 999999999998752  35889999


Q ss_pred             cCCCCCCCCCCcccHHHHHHHHhc
Q 019935          309 NSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       309 ~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++        +.++|.|+++.+.+
T Consensus       219 ~~--------~~~s~~e~~~~i~~  234 (352)
T 1xgk_A          219 TF--------ETLSPVQVCAAFSR  234 (352)
T ss_dssp             CS--------EEECHHHHHHHHHH
T ss_pred             ec--------CCCCHHHHHHHHHH
Confidence            96        56999999998875

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=1.1e-27  Score=216.26  Aligned_cols=220  Identities=16%  Similarity=0.162  Sum_probs=161.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++||||||||+||++++++|+++|++|++++|+++ +.+.+.. ....+++++.+|+.|++++. ++++++|+|||++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~-~a~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDE-FQSLGAIIVKGELDEHEKLV-ELMKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHH-HHHTTCEEEECCTTCHHHHH-HHHTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHH-hhcCCCEEEEecCCCHHHHH-HHHcCCCEEEECC
Confidence            3468999999999999999999999999999999875 3222110 01357899999999999999 8999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCC
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi  237 (333)
                      +...                +.++.++++++++ + +++||+ |+.+....+..+..+. ...| ..|..+|+++++.|+
T Consensus        88 ~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~  148 (318)
T 2r6j_A           88 AFPQ----------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPF-EALI-ERKRMIRRAIEEANI  148 (318)
T ss_dssp             CGGG----------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHH-HHHH-HHHHHHHHHHHHTTC
T ss_pred             chhh----------------hHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCc-chhH-HHHHHHHHHHHhcCC
Confidence            8531                3457899998854 7 999985 4433221121122221 1123 678889999999999


Q ss_pred             CEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCC
Q 019935          238 PFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPG  317 (333)
Q Consensus       238 ~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~  317 (333)
                      +++++||+.+. +.    ..+.+............+++++..++|++++|+|++++.++.++...++.+++.++      
T Consensus       149 ~~~~lr~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~------  217 (318)
T 2r6j_A          149 PYTYVSANCFA-SY----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPS------  217 (318)
T ss_dssp             CBEEEECCEEH-HH----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCG------
T ss_pred             CeEEEEcceeh-hh----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCC------
Confidence            99999999652 21    12222211122344556778888899999999999999999987666788888752      


Q ss_pred             CCcccHHHHHHHHhc
Q 019935          318 SDPQKWRELFKAAKA  332 (333)
Q Consensus       318 ~~~~s~~e~~~~i~~  332 (333)
                      .+.+++.|+++.+++
T Consensus       218 ~~~~s~~e~~~~~~~  232 (318)
T 2r6j_A          218 TNIITQLELISRWEK  232 (318)
T ss_dssp             GGEEEHHHHHHHHHH
T ss_pred             CCccCHHHHHHHHHH
Confidence            167999999998875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=5.2e-28  Score=209.81  Aligned_cols=206  Identities=20%  Similarity=0.192  Sum_probs=153.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|+||||||+|+||++++++|+++|+  +|++++|++++.....    ..+++++.+|++|+++++ ++++++|+||||
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~-~~~~~~d~vi~~   91 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYA-SAFQGHDVGFCC   91 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGG-GGGSSCSEEEEC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----cCCceEEecCcCCHHHHH-HHhcCCCEEEEC
Confidence            467999999999999999999999999  9999999876654332    346889999999999999 889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCC
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi  237 (333)
                      ||.....    .....++++|+.++.+++++++ .++++||++||.++++.      +...|+  .+|..+|.+++..++
T Consensus        92 ag~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------~~~~Y~--~sK~~~e~~~~~~~~  159 (242)
T 2bka_A           92 LGTTRGK----AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------SNFLYL--QVKGEVEAKVEELKF  159 (242)
T ss_dssp             CCCCHHH----HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------CSSHHH--HHHHHHHHHHHTTCC
T ss_pred             CCccccc----CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------CcchHH--HHHHHHHHHHHhcCC
Confidence            9974311    1123467889999999999874 47899999999999862      223455  667889999999999


Q ss_pred             -CEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          238 -PFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       238 -~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                       ++++||||.+ +|+....... .+....... .    +.......+++++|+|++++++++++... ..+++.+
T Consensus       160 ~~~~~vrpg~v-~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~  227 (242)
T 2bka_A          160 DRYSVFRPGVL-LCDRQESRPGEWLVRKFFGS-L----PDSWASGHSVPVVTVVRAMLNNVVRPRDK-QMELLEN  227 (242)
T ss_dssp             SEEEEEECCEE-ECTTGGGSHHHHHHHHHHCS-C----CTTGGGGTEEEHHHHHHHHHHHHTSCCCS-SEEEEEH
T ss_pred             CCeEEEcCcee-cCCCCCCcHHHHHHHHhhcc-c----CccccCCcccCHHHHHHHHHHHHhCcccc-CeeEeeH
Confidence             5999999955 7775432221 122211111 1    10111246899999999999999987653 3555544

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-28  Score=217.94  Aligned_cols=234  Identities=14%  Similarity=0.093  Sum_probs=152.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhhc---
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+......     ...++.++.+|++|+++++ ++++   
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~   81 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQD-EILSTTL   81 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHH-HHHHHHH
Confidence            456789999999999999999999999999999999987665443221     1346889999999999888 5554   


Q ss_pred             ----CCcEEEEcCCCCCCCC---C----CCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEecccc-ccCCCCCc
Q 019935          151 ----GVTHVICCTGTTAFPS---R----RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV-TKFNELPW  213 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~----~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~-~~~~~~~~  213 (333)
                          ++|+||||||......   .    ..+.....+++|+.+++++++++.     .+ ++||++||..+ +.    +.
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~----~~  156 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH----AT  156 (278)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS----CC
T ss_pred             HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc----CC
Confidence                8999999999754211   0    112223467889999999998662     24 89999999987 54    33


Q ss_pred             cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHH---HHHhhcccceeecCCCCccccc
Q 019935          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTL---LKATAGERRAVLMGQGDKLIGE  282 (333)
Q Consensus       214 ~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~  282 (333)
                      .....|+.+|..     +.+...+...|+++++|+||.+ +++......   ...   ......      +....+...+
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~~~  229 (278)
T 1spx_A          157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMAT------MKECVPAGVM  229 (278)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CCCC--------------HHHHHH------HHHHCTTSSC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc-cCccccccccCchhhhhhhHHHHH------HHhcCCCcCC
Confidence            445567766542     2333444567999999999955 666532110   000   000000      0001123468


Q ss_pred             ccHHHHHHHHHHhccCcc---cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          283 VSRIVVAEACIQALDIEF---TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       283 i~v~Dva~a~~~~l~~~~---~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++++|+|++++++++++.   ..|+++++++|       ...++.|+++.+.+
T Consensus       230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG-------~~~~~~~~~~~~~~  275 (278)
T 1spx_A          230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG-------SSLIMGLHCQDFAK  275 (278)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT-------GGGC----------
T ss_pred             CCHHHHHHHHHHHcCccccCcccCcEEEECCC-------cccccCcccccHHH
Confidence            999999999999998754   34999999997       56888888888764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.95  E-value=1.6e-27  Score=205.98  Aligned_cols=211  Identities=12%  Similarity=0.070  Sum_probs=157.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~d~  154 (333)
                      |.|+||||||+++||+++++.|+++|++|++++|++++.+++.++  ..++..+.+|++|++++++      +.+.++|+
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            458999999999999999999999999999999998887776554  5678899999999988872      23458999


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH---
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~---  224 (333)
                      +|||||......   ...++.+..+++|+.+++++++++    +++.++||++||..+..    +.+....|+.+|.   
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~----~~~~~~~Y~asKaal~  154 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----SEPDSEAYASAKGGIV  154 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS----CCTTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc----CCCCCHHHHHHHHHHH
Confidence            999999764211   122233447889999999999866    22347999999998865    4445566776664   


Q ss_pred             --HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccC
Q 019935          225 --KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE  302 (333)
Q Consensus       225 --k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~  302 (333)
                        .+.+..++.. |+++++|.||.+ ..+..........             ...+...+..++|+|++++++++..-..
T Consensus       155 ~ltk~lA~ela~-~IrVN~I~PG~i-~t~~~~~~~~~~~-------------~~~Pl~R~g~pediA~~v~fL~s~~~iT  219 (247)
T 3ged_A          155 ALTHALAMSLGP-DVLVNCIAPGWI-NVTEQQEFTQEDC-------------AAIPAGKVGTPKDISNMVLFLCQQDFIT  219 (247)
T ss_dssp             HHHHHHHHHHTT-TSEEEEEEECSB-CCCC---CCHHHH-------------HTSTTSSCBCHHHHHHHHHHHHHCSSCC
T ss_pred             HHHHHHHHHHCC-CCEEEEEecCcC-CCCCcHHHHHHHH-------------hcCCCCCCcCHHHHHHHHHHHHhCCCCC
Confidence              3555556665 899999999955 5554322221111             1124456889999999999999875566


Q ss_pred             CcEEEecCCC
Q 019935          303 GEIYEINSVE  312 (333)
Q Consensus       303 g~~~~v~~g~  312 (333)
                      |+++.++||-
T Consensus       220 G~~i~VDGG~  229 (247)
T 3ged_A          220 GETIIVDGGM  229 (247)
T ss_dssp             SCEEEESTTG
T ss_pred             CCeEEECcCH
Confidence            9999999984

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.95  E-value=6.8e-28  Score=211.14  Aligned_cols=223  Identities=12%  Similarity=0.046  Sum_probs=160.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ +++     
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~   85 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHRE-AVIKAALD   85 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHH
Confidence            34577899999999999999999999999999999999987765543322  1467889999999998887 544     


Q ss_pred             --cCCcEEEEcCCCCCCCC--CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 --EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        .++|+||||||......  ...+.....+++|+.|++++++++     +.+.++||++||..++.    +......|+
T Consensus        86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  161 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN----TNVRMASYG  161 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC----CCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC----CCCCchHHH
Confidence              38999999999864221  112223346788999999999975     23567999999998875    445566777


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++...    .    .........+....+...+.+++|+|++++++
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~----~----~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L  232 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAI-KTDALA----T----VLTPEIERAMLKHTPLGRLGEAQDIANAALFL  232 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCHHHH----H----HCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccc-cCchhh----h----ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            66642     3344455667999999999955 443211    0    00000011112234556789999999999999


Q ss_pred             ccCcc--cCCcEEEecCCCC
Q 019935          296 LDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++..  ..|+++++++|..
T Consensus       233 ~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          233 CSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             cCCcccCccCCEEEECCCcc
Confidence            98754  4599999999843

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.95  E-value=1.1e-28  Score=214.44  Aligned_cols=221  Identities=10%  Similarity=-0.037  Sum_probs=162.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCch------hh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDP------AI  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~------~~  148 (333)
                      ++++++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+++  .+.++..+.+|++|++++++      +.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999987766543322  15678899999999998872      22


Q ss_pred             hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      +.++|++|||||......   .+.++.+..+++|+.|++++++++     + .+.++||++||.....    +.+....|
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~----~~~~~~~Y  159 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA----ARPTVAPY  159 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----BCTTCHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC----CCCCchhH
Confidence            457999999999865221   122233446789999999999865     2 2457999999998865    44555667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|.     .+.+..++..+||+++.|.||.+ ..+......  +.+....         ....+...+..++|+|+++
T Consensus       160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~---------~~~~Pl~R~g~pediA~~v  229 (255)
T 4g81_D          160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWV---------KSSTPSQRWGRPEELIGTA  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCGGGHHHHTCHHHHHHH---------HHHSTTCSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC-CCchhhcccCCHHHHHHH---------HhCCCCCCCcCHHHHHHHH
Confidence            76663     56777788889999999999955 554321110  0111111         1123445688899999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++..  ..|+++.++||
T Consensus       230 ~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          230 IFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhCCCcCCEEEECCC
Confidence            99998765  45999999986

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=1.1e-27  Score=210.51  Aligned_cols=222  Identities=14%  Similarity=0.080  Sum_probs=159.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.++.+......   ...++.++.+|++|+++++ ++++   
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCD-ALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHH-HHHHHHH
Confidence            66788899999999999999999999999999999999987765543221   1257899999999999887 5543   


Q ss_pred             ----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C----CCCCeEEEEeccccc-cCCCCCccchh
Q 019935          151 ----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P----SSLKRIVLVSSVGVT-KFNELPWSIMN  217 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~----~~~~~~v~~SS~~~~-~~~~~~~~~~~  217 (333)
                          ++|+||||||......   ...+.....+++|+.+++++++++ +    .+.++||++||.... .    +.....
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----~~~~~~  159 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----GYPGWS  159 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----CCTTCH
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----CCCCCh
Confidence                8999999999764211   111222335789999999999866 2    266899999998864 3    344556


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++........+....         ....+...+.+++|+|+++
T Consensus       160 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dva~~v  229 (262)
T 3pk0_A          160 HYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNI-MTEGLLENGEEYIASM---------ARSIPAGALGTPEDIGHLA  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CCHHHHTTCHHHHHHH---------HTTSTTSSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcC-cCccccccCHHHHHHH---------HhcCCCCCCcCHHHHHHHH
Confidence            6776664     23444555668999999999955 5543211111111111         1223445688999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++++.  ..|++++++||..
T Consensus       230 ~~L~s~~~~~itG~~i~vdGG~~  252 (262)
T 3pk0_A          230 AFLATKEAGYITGQAIAVDGGQV  252 (262)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCcCCEEEECCCee
Confidence            99998764  4599999999854

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.95  E-value=6.4e-28  Score=214.20  Aligned_cols=230  Identities=16%  Similarity=0.161  Sum_probs=157.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc------------chhhhhhccC--CCCceEEEEccCCCcC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------------EKATTLFGKQ--DEETLQVCKGDTRNPK  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~------------~~~~~~~~~~--~~~~~~~v~~D~~d~~  142 (333)
                      |.++++|++|||||+|+||++++++|+++|++|++++|++            +..+......  .+.++.++.+|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            5567889999999999999999999999999999999973            2222221111  1567899999999999


Q ss_pred             CCchhhhc-------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEecccccc
Q 019935          143 DLDPAIFE-------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       143 ~~~~~~~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~  207 (333)
                      +++ ++++       ++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..++.
T Consensus        85 ~v~-~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALE-SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHH-HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHH-HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            887 5543       8999999999864211   112223346789999999999975     23567999999998875


Q ss_pred             CCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhccc----ceeecCCC
Q 019935          208 FNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGER----RAVLMGQG  276 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~----~~~~~~~~  276 (333)
                          +......|+.+|.     .+.+...+...|+++++|+||.+ +++.......  .+........    ........
T Consensus       164 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (281)
T 3s55_A          164 ----ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNI-ETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH  238 (281)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB-CSTTTSSHHHHHC-------CCHHHHHHHHHHHC
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc-cCccccchhhhccccccccccchhHHHHHHHhhh
Confidence                4455567776664     23344455567999999999955 7776532110  0000000000    00000111


Q ss_pred             CcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          277 DKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       277 ~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ....++++++|+|++++++++++.  ..|+++++++|.
T Consensus       239 ~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          239 LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA  276 (281)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            222678999999999999998765  349999999973

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.95  E-value=1.6e-27  Score=215.39  Aligned_cols=220  Identities=16%  Similarity=0.175  Sum_probs=160.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-c-----hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-E-----KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~-----~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ++++|+||||||+||++++++|+++|++|++++|++ +     +.+.+.. ....+++++.+|++|++++. ++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~-~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMV-SVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHH-HHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHH-HHHcCCCE
Confidence            356899999999999999999999999999999986 2     2222111 01457899999999999999 89999999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV  232 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l  232 (333)
                      |||+++...                +.++.+++++++. + ++|||+ |+.+....+..+..+ ....| ..|..+|+++
T Consensus        81 vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p-~~~~y-~sK~~~e~~~  141 (321)
T 3c1o_A           81 VISALPFPM----------------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPP-FESVL-EKKRIIRRAI  141 (321)
T ss_dssp             EEECCCGGG----------------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHH-HHHHH-HHHHHHHHHH
T ss_pred             EEECCCccc----------------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCC-cchHH-HHHHHHHHHH
Confidence            999998631                3456899998854 7 999983 433321111112112 01234 6788899999


Q ss_pred             HhcCCCEEEEEcccccCCCCCCcchHHHHHH---hhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEec
Q 019935          233 QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA---TAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN  309 (333)
Q Consensus       233 ~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~  309 (333)
                      ++.|+++++|||+.+ ++..    .+.+...   .........+++++..+++++++|+|++++.++.++...+++|++.
T Consensus       142 ~~~~~~~~~lrp~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~  216 (321)
T 3c1o_A          142 EAAALPYTYVSANCF-GAYF----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYR  216 (321)
T ss_dssp             HHHTCCBEEEECCEE-HHHH----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECC
T ss_pred             HHcCCCeEEEEecee-cccc----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEe
Confidence            999999999999965 3221    1111110   1123345567788888999999999999999999877668888887


Q ss_pred             CCCCCCCCCCcccHHHHHHHHhc
Q 019935          310 SVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       310 ~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++      .+.++++|+++.+++
T Consensus       217 g~------~~~~t~~e~~~~~~~  233 (321)
T 3c1o_A          217 PP------KNIISQNELISLWEA  233 (321)
T ss_dssp             CG------GGEEEHHHHHHHHHH
T ss_pred             CC------CCcccHHHHHHHHHH
Confidence            62      167999999998875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.95  E-value=9.3e-28  Score=211.39  Aligned_cols=220  Identities=14%  Similarity=0.084  Sum_probs=155.9

Q ss_pred             CCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh------
Q 019935           76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        76 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+.++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.. +.++.++.+|++|+++++ +++      
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~-~~~~~~~~~   98 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANLSDRKSIK-QLAEVAERE   98 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeecCCHHHHH-HHHHHHHHH
Confidence            366788899999999999999999999999999999999988776654433 567899999999999887 554      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||......   ...++....+++|+.|++++++++     +.+.++||++||..++.    +......|+
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~  174 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV----GNPGQTNYC  174 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------CHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC----CCCCchhHH
Confidence             38999999999764211   111223346789999988888855     23567999999998765    445566777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|.     .+.+...+...|+++++|+||.+ +++...........         .+....+...+.+++|+|++++++
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v-~t~~~~~~~~~~~~---------~~~~~~p~~r~~~~edvA~~v~~L  244 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFI-KSAMTDKLNEKQKE---------AIMAMIPMKRMGIGEEIAFATVYL  244 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSHHHHTCCHHHHH---------HHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcC-CCchhhccCHHHHH---------HHHhcCCCCCCcCHHHHHHHHHHH
Confidence            6664     23444555667999999999955 44422111111111         112234556789999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.  ..|+++++++|
T Consensus       245 ~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          245 ASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCccccCccCCEEEECCC
Confidence            98764  45999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=4.3e-27  Score=208.49  Aligned_cols=230  Identities=15%  Similarity=0.132  Sum_probs=160.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC------------cchhhhhhccC--CCCceEEEEccCCCcCC
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPKD  143 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~D~~d~~~  143 (333)
                      .++.+|++|||||+|+||++++++|+++|++|++++|+            .+..+......  .+.++.++.+|++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            45678999999999999999999999999999999987            33332221111  15678999999999998


Q ss_pred             Cchhhhc-------CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCC
Q 019935          144 LDPAIFE-------GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNE  210 (333)
Q Consensus       144 ~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~  210 (333)
                      ++ ++++       ++|+||||||...... ..+.....+++|+.+++++++++     +++ .++||++||..++....
T Consensus        89 v~-~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  166 (278)
T 3sx2_A           89 LS-AALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG  166 (278)
T ss_dssp             HH-HHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC
T ss_pred             HH-HHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc
Confidence            88 5544       8999999999864321 22333457889999999999975     122 56999999998875433


Q ss_pred             CCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHH-HHhhcccceeecCCCCcccccc
Q 019935          211 LPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLL-KATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       211 ~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      .+......|+.+|..     +.+...+...|+++++|+||.+ +++...... ..+. ...........+....+ ..++
T Consensus       167 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~  244 (278)
T 3sx2_A          167 SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGV-ETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVL  244 (278)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB-SSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSB
T ss_pred             cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCc-cCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcC
Confidence            333556677766642     3344455667999999999954 776643211 1111 11111111122333334 6889


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++|+|+++++++++..  ..|+++++++|
T Consensus       245 ~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          245 APEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            99999999999998754  45999999997

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.95  E-value=3.3e-27  Score=210.59  Aligned_cols=223  Identities=14%  Similarity=0.108  Sum_probs=160.5

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      +.++++|+||||||+|+||++++++|+++|++|++++|+.++.+.......   ..++.++.+|++|+++++ ++     
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCA-DAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHH-HHHHHHH
Confidence            567788999999999999999999999999999999999877665443221   257889999999998877 44     


Q ss_pred             --hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccc-cCCCCCccchh
Q 019935          149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT-KFNELPWSIMN  217 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~-~~~~~~~~~~~  217 (333)
                        +.++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..+. .    +.....
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----~~~~~~  190 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----GYPGWS  190 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----BCTTCH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----CCCCCH
Confidence              347899999999864211   111222346789999999999976     2367899999998864 3    334456


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++........+....         ........+.+++|+|+++
T Consensus       191 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v  260 (293)
T 3rih_A          191 HYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNI-LTEGLVDMGEEYISGM---------ARSIPMGMLGSPVDIGHLA  260 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CCHHHHHTCHHHHHHH---------HTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCC-cCcchhhccHHHHHHH---------HhcCCCCCCCCHHHHHHHH
Confidence            6776664     23344455667999999999955 5543211111111111         1123445678999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVEGE  314 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~~  314 (333)
                      ++++.+..  ..|++++++||...
T Consensus       261 ~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          261 AFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHhCccccCCCCCEEEECCCccC
Confidence            99998754  45999999998654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.5e-27  Score=211.71  Aligned_cols=229  Identities=14%  Similarity=0.121  Sum_probs=155.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhhhhcc---CCCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~---~~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++| +.+..+.....   ....++.++.+|++|+++++ +++   
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIA-DMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHH-HHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHH-HHHHHH
Confidence            45677899999999999999999999999999999999 44444433221   11457889999999999887 554   


Q ss_pred             ----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          150 ----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                          .++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..++.    +.....
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  174 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV----ASPFKS  174 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCH
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc----CCCCch
Confidence                38999999999864221   112223346789999999999975     23567999999998875    444556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHH--hhcccc-eeecCCCCcccccccHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA--TAGERR-AVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~i~v~Dva  289 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ +++............  ...... ...+....+..++++++|+|
T Consensus       175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA  253 (281)
T 3v2h_A          175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVA  253 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CC----------------------------CCTTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCC-cCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHH
Confidence            77776642     3344455667999999999955 666533211111100  000000 11234455667899999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++++.  ..|++++++||
T Consensus       254 ~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          254 SLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             HHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             HHHHHHcCCCcCCCCCcEEEECCC
Confidence            99999998765  45999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.95  E-value=3.6e-27  Score=206.64  Aligned_cols=218  Identities=16%  Similarity=0.131  Sum_probs=150.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ ++++       +
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   81 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADVTNEADAT-AALAFAKQEFGH   81 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            467899999999999999999999999999999999987766654433 457889999999998887 5544       8


Q ss_pred             CcEEEEcCCCCCCCC-------CCCCCCCCCcchhHHHHHHHHHhcC----C-------CCCeEEEEeccccccCCCCCc
Q 019935          152 VTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP----S-------SLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~----~-------~~~~~v~~SS~~~~~~~~~~~  213 (333)
                      +|+||||||......       ...+.....+++|+.+++++++++.    +       +.++||++||..++.    +.
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~----~~  157 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD----GQ  157 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----CC
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc----CC
Confidence            999999999864211       1112233467899999999999662    1       356899999998876    44


Q ss_pred             cchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-cccccHHH
Q 019935          214 SIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVSRIV  287 (333)
Q Consensus       214 ~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D  287 (333)
                      .....|+.+|.     .+.+...+...|+++++|+||.+ +++..........         ..+....+. ..+.+++|
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~---------~~~~~~~p~~~r~~~~~d  227 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIF-DTPMMAGMPQDVQ---------DALAASVPFPPRLGRAEE  227 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-SCC-----------------------CCSSSSCSCBCHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCC-CChhhccCCHHHH---------HHHHhcCCCCCCCCCHHH
Confidence            45567776664     23344555668999999999955 6665322111111         111122233 57899999


Q ss_pred             HHHHHHHhccCcccCCcEEEecCCC
Q 019935          288 VAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       288 va~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      +|+++++++++....|++++++||-
T Consensus       228 va~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tpc_A          228 YAALVKHICENTMLNGEVIRLDGAL  252 (257)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             HHHHHHHHcccCCcCCcEEEECCCc
Confidence            9999999998766779999999974

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.95  E-value=1.8e-27  Score=207.39  Aligned_cols=219  Identities=18%  Similarity=0.099  Sum_probs=160.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.++.+...... ..++..+.+|++|+++++ ++++      
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   81 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMALNVTNPESIE-AVLKAITDEF   81 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceEEEEeCCCHHHHH-HHHHHHHHHc
Confidence            45677899999999999999999999999999999999987766654332 345788999999999887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...++....+++|+.|++++++++     +++.++||++||..++.    +......|+.
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  157 (248)
T 3op4_A           82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM----GNAGQANYAA  157 (248)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----CCCCChHHHH
Confidence             8999999999864211   112223346789999999999966     23567999999988765    4455667776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ .++.............         ....+...+.+++|+|+++++++
T Consensus       158 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dva~~v~~L~  227 (248)
T 3op4_A          158 AKAGVIGFTKSMAREVASRGVTVNTVAPGFI-ETDMTKALNDEQRTAT---------LAQVPAGRLGDPREIASAVAFLA  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-SSTTTTTSCHHHHHHH---------HHTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEeeCCC-CCchhhhcCHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHc
Confidence            664     23444555677999999999955 6655432211111111         11234457899999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      +++.  ..|+++++++|
T Consensus       228 s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          228 SPEAAYITGETLHVNGG  244 (248)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCccCCccCcEEEECCC
Confidence            8754  34999999997

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.94  E-value=2.4e-27  Score=206.39  Aligned_cols=217  Identities=14%  Similarity=0.090  Sum_probs=156.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+. ++.+.+.+..  .+.++.++.+|++|+++++ ++++      
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVK-AMIKEVVSQF   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            3568999999999999999999999999999988743 4444332211  1567889999999999887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.|++++++++    + ++.++||++||..++.    +......|+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  156 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV----GNPGQANYVA  156 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----CCCCChHHHH
Confidence             8999999999864211   111222346789999999999976    2 3667999999998765    4445567776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ +++......+.+.....         ...+...+.+++|+|+++++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~l~  226 (246)
T 3osu_A          157 TKAGVIGLTKSAARELASRGITVNAVAPGFI-VSDMTDALSDELKEQML---------TQIPLARFGQDTDIANTVAFLA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-GGGCCSCSCHHHHHHHH---------TTCTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECCC-cCCcccccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHh
Confidence            664     23344555677999999999955 66654433333322221         2234567889999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      +++.  ..|++|++++|
T Consensus       227 s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          227 SDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CccccCCCCCEEEeCCC
Confidence            8765  34999999987

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=3.2e-27  Score=212.09  Aligned_cols=222  Identities=18%  Similarity=0.197  Sum_probs=160.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch------hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK------ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +++|+||||||+||++++++|++.|++|++++|+...      .+.+.. ....+++++.+|++|++++. ++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~-~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLES-FKASGANIVHGSIDDHASLV-EAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHH-HHTTTCEEECCCTTCHHHHH-HHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHH-HHhCCCEEEEeccCCHHHHH-HHHcCCCEE
Confidence            4689999999999999999999999999999998532      211111 11467899999999999999 899999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHH
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ||+++...                +.++.+++++++. + ++|||+ |+.+....+..+..+. ...| ..|..+|++++
T Consensus        82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~-~~~y-~sK~~~e~~~~  142 (308)
T 1qyc_A           82 ISTVGSLQ----------------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPA-KSVF-EVKAKVRRAIE  142 (308)
T ss_dssp             EECCCGGG----------------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTH-HHHH-HHHHHHHHHHH
T ss_pred             EECCcchh----------------hhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcc-hhHH-HHHHHHHHHHH
Confidence            99998631                3456889998854 7 999985 5444322222222221 1223 67888999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      +.|++++++||+.+ ++........ .............+++++..++|++++|+|++++.++.++...++.|++.++  
T Consensus       143 ~~~~~~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~--  218 (308)
T 1qyc_A          143 AEGIPYTYVSSNCF-AGYFLRSLAQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLP--  218 (308)
T ss_dssp             HHTCCBEEEECCEE-HHHHTTTTTC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCG--
T ss_pred             hcCCCeEEEEecee-cccccccccc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCC--
Confidence            99999999999965 3321111000 0000112334556778888999999999999999999987666888888762  


Q ss_pred             CCCCCCcccHHHHHHHHhc
Q 019935          314 EGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       314 ~~~~~~~~s~~e~~~~i~~  332 (333)
                          .+.+|+.|+++.+++
T Consensus       219 ----~~~~s~~e~~~~~~~  233 (308)
T 1qyc_A          219 ----ANTLSLNELVALWEK  233 (308)
T ss_dssp             ----GGEEEHHHHHHHHHH
T ss_pred             ----CCccCHHHHHHHHHH
Confidence                167999999998865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.94  E-value=4.2e-27  Score=207.84  Aligned_cols=217  Identities=13%  Similarity=0.066  Sum_probs=160.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+...... +.++.++.+|++|+++++ ++++       +
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   85 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDLTNEVSVR-ALIDFTIDTFGR   85 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCCCCHHHHH-HHHHHHHHHcCC
Confidence            567899999999999999999999999999999999987766654433 567889999999999888 5554       8


Q ss_pred             CcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      +|+||||||......     ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  161 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA----AYDMSTAYAC  161 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----BCSSCHHHHH
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC----CCCCChHHHH
Confidence            999999999863211     111222346789999999999976     23668999999998876    4555667776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|..     +.+...+..+|+++++|+||.+ +++...... ..+....         ........+.+++|+|++++++
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~p~dvA~~v~~L  231 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLV-RTPRLEVGLPQPIVDIF---------ATHHLAGRIGEPHEIAELVCFL  231 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCTTTC---CHHHHHHH---------HTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCC-cCccccccCCHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHH
Confidence            6642     3344555668999999999954 776543111 1111111         1223445688999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|+++++++|
T Consensus       232 ~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          232 ASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCcccCCcCCCEEEECCC
Confidence            98754  45999999997

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.94  E-value=3.4e-27  Score=209.01  Aligned_cols=226  Identities=13%  Similarity=0.109  Sum_probs=161.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      .+++++|++|||||+|+||++++++|+++|++|++++|+.++.++..... ..++.++.+|++|+++++ ++++      
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   99 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDVSSAKDAE-SMVEKTTAKW   99 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecCCCHHHHH-HHHHHHHHHc
Confidence            34567899999999999999999999999999999999987776654433 567889999999998887 5543      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||..++.    +......|+.
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  175 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS----AIADRTAYVA  175 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS----CCTTBHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc----CCCCChhHHH
Confidence             8999999999764211   111222345679999999999866    3 3567999999998876    5556667877


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHh
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      +|..     +.+...+...|+++++|+||.+ +++..    .......... .....+........+.+++|+|++++++
T Consensus       176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L  250 (277)
T 4dqx_A          176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTI-DSPYF----TKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFL  250 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHH----HHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcC-cCchh----hhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHH
Confidence            6642     3344455667999999999955 44320    1110000000 0000122334556789999999999999


Q ss_pred             ccCcc--cCCcEEEecCCCC
Q 019935          296 LDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++..  ..|++++++||..
T Consensus       251 ~s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          251 ASDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             HSGGGTTCCSCEEEESSSSS
T ss_pred             hCCccCCCcCCEEEECCchh
Confidence            98765  4599999999853

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=3.9e-27  Score=207.08  Aligned_cols=228  Identities=15%  Similarity=0.112  Sum_probs=155.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+.......   +.++.++.+|++|+++++ ++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVD-AVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            3567899999999999999999999999999999999876654432211   346888999999998887 5554     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  158 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ----PLWYEPIYN  158 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC----CCCCcchHH
Confidence              8999999999764211   111122346788999999999865     23678999999999876    334456677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh--cccceeecCCC-CcccccccHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA--GERRAVLMGQG-DKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~i~v~Dva~a~  292 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++........+.....  .......+... .+...+++++|+|+++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  237 (263)
T 3ai3_A          159 VTKAALMMFSKTLATEVIKDNIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFF  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc-cCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            66542     3333445567999999999955 66532110000000000  00000000011 2345789999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.  ..|+.|++++|.
T Consensus       238 ~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          238 VFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             HHHTSTTCTTCCSCEEEESTTC
T ss_pred             HHHcCccccCCCCcEEEECCCc
Confidence            99998754  348999999974

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.94  E-value=7.5e-27  Score=203.57  Aligned_cols=219  Identities=16%  Similarity=0.064  Sum_probs=154.5

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCc
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVT  153 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d  153 (333)
                      ..+..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.... ..++.++.+|++|.++++ ++++   ++|
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~id   86 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNLANKEECS-NLISKTSNLD   86 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHH-HHHHTCSCCS
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCCCCHHHHH-HHHHhcCCCC
Confidence            44567899999999999999999999999999999999988776654433 457889999999998888 6665   789


Q ss_pred             EEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||.....   ....+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|..
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~a  162 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA----GNPGQANYCASKAG  162 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------CCSCSHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc----CCCCCchhHHHHHH
Confidence            999999976421   1223334457889999999999865     23567999999998876    44556678776642


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                           +.+...+...|+++++|+||.+ .++.............         ........+++++|+|++++++++++.
T Consensus       163 ~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~l~s~~~  232 (249)
T 3f9i_A          163 LIGMTKSLSYEVATRGITVNAVAPGFI-KSDMTDKLNEKQREAI---------VQKIPLGTYGIPEDVAYAVAFLASNNA  232 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCB-C------CCHHHHHHH---------HHHCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCcc-ccCcccccCHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence                 3333445567999999999955 5554332212111111         112344578999999999999998764


Q ss_pred             --cCCcEEEecCC
Q 019935          301 --TEGEIYEINSV  311 (333)
Q Consensus       301 --~~g~~~~v~~g  311 (333)
                        ..|+.+++++|
T Consensus       233 ~~~tG~~~~vdgG  245 (249)
T 3f9i_A          233 SYITGQTLHVNGG  245 (249)
T ss_dssp             TTCCSCEEEESTT
T ss_pred             CCccCcEEEECCC
Confidence              35999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=8.5e-28  Score=213.39  Aligned_cols=221  Identities=16%  Similarity=0.175  Sum_probs=156.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--C---CceEEEEccCCCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--E---ETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~---~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|++++.+...+...  .   .++.++.+|++|+++++ +++    
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   86 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETA-RAVDAVT   86 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHH-HHHHHHH
Confidence            5678999999999999999999999999999999999877654432211  1   26889999999998887 444    


Q ss_pred             ---cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          150 ---EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                         .++|+||||||......    ...+.....+++|+.|++++++++     +.+.++||++||..++.    +.....
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  162 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN----THRWFG  162 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----CCTTCT
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC----CCCCCh
Confidence               37899999999732111    111222346789999999999966     23456999999998876    444556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ +++.....  ...+..         .+....+...+.+++|+|+
T Consensus       163 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~---------~~~~~~p~~r~~~~~dva~  232 (281)
T 3svt_A          163 AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLI-RTDLVAAITESAELSS---------DYAMCTPLPRQGEVEDVAN  232 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSGGGHHHHTCHHHHH---------HHHHHCSSSSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcC-cCcchhhcccCHHHHH---------HHHhcCCCCCCCCHHHHHH
Confidence            77766642     3334445567899999999955 55542210  001111         1111234457889999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCCCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSVEGE  314 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~~~  314 (333)
                      ++++++++..  ..|++|++++|...
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQML  258 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhc
Confidence            9999998754  35999999998544

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.94  E-value=2.1e-27  Score=208.21  Aligned_cols=225  Identities=11%  Similarity=0.037  Sum_probs=159.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++.++..++. +.++..+.+|++|++++++      +.+.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999998877765544 5678889999999998872      234589


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHH--
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~--  224 (333)
                      |++|||||......   ...++....+++|+.|++++++++..   .-++||++||.....    +.+....|+.+|.  
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----~~~~~~~Y~asKaav  180 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----GTPAFSVYAASKAAL  180 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----CCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----CCCCchHHHHHHHHH
Confidence            99999999764211   12223344788999999999996632   235899999998865    4455566776664  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          225 ---KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       225 ---k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                         .+.+..++..+||++++|.||.+ ..+............  .......+....+...+..++|+|+++++++++.. 
T Consensus       181 ~~ltr~lA~Ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~--~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~  257 (273)
T 4fgs_A          181 RSFARNWILDLKDRGIRINTLSPGPT-ETTGLVELAGKDPVQ--QQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSS  257 (273)
T ss_dssp             HHHHHHHHHHTTTSCEEEEEEEECSB-CC---------CHHH--HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCC-CChhHHHhhccCchh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence               45666777888999999999954 555422111000000  00000001112344578899999999999998765 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|+++.++||
T Consensus       258 ~iTG~~i~VDGG  269 (273)
T 4fgs_A          258 FVTGAELFVDGG  269 (273)
T ss_dssp             TCCSCEEEESTT
T ss_pred             CccCCeEeECcC
Confidence             45999999997

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=2e-27  Score=207.72  Aligned_cols=220  Identities=10%  Similarity=0.058  Sum_probs=155.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+....  ...++.++.+|++|+++++ ++++      
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   86 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELS-ALADFAISKL   86 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHH-HHHHHHHHhc
Confidence            456789999999999999999999999999999999987655433221  1457889999999999888 5554      


Q ss_pred             -CCcEEEEcCCCCCCCC--CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 -GVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                       ++|+||||||......  ...+.....+++|+.++.++++++     +.+.++||++||..++.    +..+...|+.+
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  162 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASS  162 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----CCCCCcccHHH
Confidence             8999999999764211  111122345778999999999866     23678999999998876    44455667766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |..     +.....+...|+++++++||.+ +++.... ..+.+.....         ...+...+++++|+|+++++++
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~  232 (255)
T 1fmc_A          163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAI-LTDALKSVITPEIEQKML---------QHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSB-CSHHHHTTCCHHHHHHHH---------HTCSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecccC-cchhhhhccChHHHHHHH---------hcCCcccCCCHHHHHHHHHHHh
Confidence            542     2222333456999999999955 5543211 1111211111         1123346889999999999999


Q ss_pred             cCcc--cCCcEEEecCCCC
Q 019935          297 DIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~~  313 (333)
                      +++.  ..|++|++++|..
T Consensus       233 ~~~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          233 SPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CCccccCCCcEEEECCcee
Confidence            8754  3588999999754

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=8.7e-27  Score=204.08  Aligned_cols=220  Identities=15%  Similarity=0.043  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++ +...... . . .++.+|++|+++++ +++       .+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~-~-~~~~~D~~~~~~~~-~~~~~~~~~~g~   77 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-G-G-AFFQVDLEDERERV-RFVEEAAYALGR   77 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-T-C-EEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-h-C-CEEEeeCCCHHHHH-HHHHHHHHHcCC
Confidence            4567899999999999999999999999999999998876 4443322 1 4 78899999998877 444       47


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  153 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----AEQENAAYNASK  153 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----BCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC----CCCCChhHHHHH
Confidence            999999999764211   111122346788999999999865     23678999999998765    334456677665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHH-HhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK-ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      ..     +.+...+...|+++++|+||.+ +++.    ...+.. ..........+....+..++++++|+|++++++++
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s  228 (256)
T 2d1y_A          154 GGLVNLTRSLALDLAPLRIRVNAVAPGAI-ATEA----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS  228 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHH----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCc-cCch----hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            42     2333444567999999999955 4332    111100 00001111112223345679999999999999998


Q ss_pred             Ccc--cCCcEEEecCCC
Q 019935          298 IEF--TEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g~  312 (333)
                      ++.  ..|+.+++++|.
T Consensus       229 ~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          229 EKASFITGAILPVDGGM  245 (256)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCCCCCEEEECCCc
Confidence            754  458999999974

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.94  E-value=1e-26  Score=207.47  Aligned_cols=222  Identities=12%  Similarity=0.115  Sum_probs=157.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhc--cCCCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFG--KQDEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~--~~~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ..++++|+||||||+|+||++++++|+++|++|++++|+.+... ....  ...+.++.++.+|++|+++++ +++    
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~  120 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCK-DIVQETV  120 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHH-HHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHH
Confidence            45678899999999999999999999999999999999875422 2111  111567899999999998887 544    


Q ss_pred             ---cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 ---EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         .++|+||||||......    ...++....+++|+.|++++++++..   ..++||++||..++.    +......|
T Consensus       121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  196 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE----GNETLIDY  196 (291)
T ss_dssp             HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH----CCTTCHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC----CCCCChhH
Confidence               37999999999753211    11222345788999999999997632   235999999998876    34445667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++...        ..........+........+.+++|+|+++++
T Consensus       197 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~~--------~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  267 (291)
T 3ijr_A          197 SATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPI-WTPLIP--------SSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY  267 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSTHHH--------HHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCC-cCCccc--------ccCCHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            766642     3334455567999999999955 554311        00011111123344556788999999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++..  ..|+++++++|-
T Consensus       268 L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          268 LASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             HHSGGGTTCCSCEEEESSSC
T ss_pred             HhCCccCCCcCCEEEECCCc
Confidence            998754  459999999973

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.94  E-value=3e-26  Score=204.43  Aligned_cols=226  Identities=16%  Similarity=0.105  Sum_probs=161.4

Q ss_pred             CCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CC
Q 019935           76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GV  152 (333)
Q Consensus        76 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~  152 (333)
                      .++++++|+||||||+|+||++++++|+++|++|++++|+.++.+...... ..+++++.+|++|+++++ ++++   ++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~-~~~~~~~~i   87 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVR-RFADGVSGA   87 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHH-HHHHTCCCE
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHH-HHHHhcCCC
Confidence            466778899999999999999999999999999999999998877766544 567899999999999988 6665   67


Q ss_pred             cEEEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC---------CCCccchhhhHH
Q 019935          153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN---------ELPWSIMNLFGV  221 (333)
Q Consensus       153 d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~---------~~~~~~~~~~~~  221 (333)
                      |+||||||...... ...+..+..+++|+.|++++++++. ...+|||++||..++...         ..++.+...|+.
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  167 (291)
T 3rd5_A           88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQ  167 (291)
T ss_dssp             EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHH
T ss_pred             CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHH
Confidence            99999999865321 2344555678999999999999774 456799999999886431         123455667777


Q ss_pred             HHHH-----HHHHHHHHhcC--CCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSG--LPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~g--i~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+...|  +++++|+||.+ .++........+....         ......+-..+++|+|+++++
T Consensus       168 sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~A~~~~~  237 (291)
T 3rd5_A          168 SKLANLLFTSELQRRLTAAGSPLRALAAHPGYS-HTNLQGASGRKLGDAL---------MSAATRVVATDADFGARQTLY  237 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGG-GSCC-----------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCC-ccccccccchHHHHHH---------HHHHHHHHhCCHHHHHHHHHH
Confidence            6642     33334455556  99999999955 5554332111111100         000111223469999999999


Q ss_pred             hccCcccCCcEEEecCCCC
Q 019935          295 ALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~~  313 (333)
                      ++.++...|+.+.+++|..
T Consensus       238 l~~~~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          238 AASQDLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHHSCCCTTCEEEETTSSS
T ss_pred             HHcCCCCCCceeCCccccc
Confidence            9998767799999987653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=1.2e-26  Score=203.89  Aligned_cols=227  Identities=13%  Similarity=0.055  Sum_probs=155.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|++++.+...... ..++.++.+|++|+++++ ++++       
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~d~~~v~-~~~~~~~~~~g   85 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-ENGGFAVEVDVTKRASVD-AAMQKAIDALG   85 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-TTCCEEEECCTTCHHHHH-HHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hcCCeEEEEeCCCHHHHH-HHHHHHHHHcC
Confidence            3467789999999999999999999999999999999987776654433 236888999999999887 5554       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++     +.+ .++||++||..++.    +......|+.
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  161 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV----GAPLLAHYSA  161 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc----CCCCchhHHH
Confidence            8999999999754211   111122346788999999999865     224 68999999998865    3344556776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-c-ccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-G-ERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+...|+++++|+||.+ +++.............. . ......+....+...+++++|+|+++++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  240 (263)
T 3ak4_A          162 SKFAVFGWTQALAREMAPKNIRVNCVCPGFV-KTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVF  240 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-TTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHcCeEEEEEecccc-cChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            6542     2333444567999999999955 55432110000000000 0 0000011112334578999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.  ..|++|++++|
T Consensus       241 l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          241 LASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHSGGGTTCCSCEEEESSS
T ss_pred             HhCccccCCCCCEEEECcC
Confidence            998753  45899999987

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.94  E-value=5.1e-27  Score=204.63  Aligned_cols=226  Identities=13%  Similarity=0.075  Sum_probs=158.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc-CCCCceEEEEccCCCcCCCch------hhhc
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK-QDEETLQVCKGDTRNPKDLDP------AIFE  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~v~~D~~d~~~~~~------~~~~  150 (333)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.+..+...+. ....++.++.+|++|++++++      +.+.
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999987654322110 015678999999999988772      2345


Q ss_pred             CCcEEEEcCCCCCCCC--CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          151 GVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      ++|++|||||......  ...+.....+++|+.+++++++++    +.+.++||++||..+..    +......|+.+|.
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----~~~~~~~Y~asKa  158 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT----GQGNTSGYCASKG  158 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH----CCSSCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc----CCCCchHHHHHHH
Confidence            8999999999754221  111223346788999999999865    33347999999998865    4445566776664


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-cccccHHHHHHHHHHhccC
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~~~l~~  298 (333)
                           .+.+..++.++||++++|.||.+ ..+...........   .......+....+. +.+..++|+|+++++++++
T Consensus       159 av~~ltr~lA~ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~---~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~  234 (258)
T 4gkb_A          159 AQLALTREWAVALREHGVRVNAVIPAEV-MTPLYRNWIATFED---PEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSP  234 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSB-CCSCC--------------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCC-CChhHhhhhhcccC---hHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence                 56677788889999999999955 55543221111000   00000011111223 3688999999999999987


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+++.++||
T Consensus       235 ~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          235 RASHTTGEWLFVDGG  249 (258)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCccCCeEEECCC
Confidence            65  45999999997

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=2.6e-27  Score=210.21  Aligned_cols=221  Identities=18%  Similarity=0.135  Sum_probs=152.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      .++|+||||||+||||++++++|+++|++|++++|+.++.+.+.... ..+++++.+|++|+++++ ++++       ++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDVTDGERID-VVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCTTCHHHHH-HHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeCCCHHHHH-HHHHHHHHhCCCC
Confidence            45689999999999999999999999999999999988776654433 467899999999999887 5554       89


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||.....   ....+.....+++|+.|++++++++    + .+.++||++||..++.    +..+...|+.+|.
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~  156 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL----SFAGFSAYSATKA  156 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----CCCCchHHHHHHH
Confidence            9999999975421   1111222346789999977776644    3 3678999999998875    5556677887664


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .     +.+...+...|+++++|+||.+ +++....       ....+.........   +........+++++|+|+++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~a~  232 (281)
T 3m1a_A          157 ALEQLSEGLADEVAPFGIKVLIVEPGAF-RTNLFGKGAAYFSEENPAYAEKVGPTRQ---LVQGSDGSQPGDPAKAAAAI  232 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCB-CCTTTCCCCEEECCBCTTTHHHHHHHHH---HHHC-----CBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcc-ccccccccccccCCcchhhHHHhHHHHH---HHhhccCCCCCCHHHHHHHH
Confidence            2     2223344557999999999955 5554211       01111111111111   11123445788999999999


Q ss_pred             HHhccCcccCCcEEEecCC
Q 019935          293 IQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~~~g~~~~v~~g  311 (333)
                      +.+++++.. +..|+++++
T Consensus       233 ~~~~~~~~~-~~~~~l~s~  250 (281)
T 3m1a_A          233 RLALDTEKT-PLRLALGGD  250 (281)
T ss_dssp             HHHHHSSSC-CSEEEESHH
T ss_pred             HHHHhCCCC-CeEEecCch
Confidence            999998654 668999873

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.94  E-value=4e-27  Score=207.37  Aligned_cols=222  Identities=13%  Similarity=0.042  Sum_probs=158.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+.++.+......   .+.++.++.+|++|+++++ +++    
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   93 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPA-ELARRAA   93 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHH-HHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHH
Confidence            55678899999999999999999999999999999999987765543221   1567899999999999887 544    


Q ss_pred             ---cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchh
Q 019935          150 ---EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                         .++|+||||||......   ...+.....+++|+.+++++++++.     .+ .++||++||..++.    +.....
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  169 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA----PLPDHY  169 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTCH
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc----CCCCCh
Confidence               38999999999864211   1112223467899999999998662     23 46999999998875    455566


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++....    +   .........+....+...+.+++|+|+++
T Consensus       170 ~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~----~---~~~~~~~~~~~~~~p~~r~~~p~dva~~v  241 (266)
T 4egf_A          170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVV-LTEMGQR----V---WGDEAKSAPMIARIPLGRFAVPHEVSDAV  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB-CSHHHHH----H---TCSHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCC-cCchhhh----h---ccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            7776664     23444555667999999999955 4432110    0   00000000111223455788999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++..  ..|+++++++|
T Consensus       242 ~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          242 VWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhcCccCcEEEECCC
Confidence            99998754  45999999997

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=2.2e-27  Score=208.34  Aligned_cols=222  Identities=13%  Similarity=0.119  Sum_probs=155.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+...+..  .+.++.++.+|++|+++++ ++++      
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   89 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRE-RLVAMAVNLH   89 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            456789999999999999999999999999999999987655432211  1456888999999998877 5443      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 -GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       ++|+||||||.....    ....+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  165 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH----PFPNLGPYN  165 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTBHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC----CCCCchhHH
Confidence             899999999975311    0111122346788999999999865     24678999999999876    445556777


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++.....+..       ......+....+..++++++|+|++++++
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~v~~l  237 (260)
T 2zat_A          166 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLI-KTNFSQVLWMD-------KARKEYMKESLRIRRLGNPEDCAGIVSFL  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSSTTHHHHSS-------HHHHHHHHHHHTCSSCBCGGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcc-cCccchhcccC-------hHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            66642     3333445567999999999955 55543210000       00000011112335689999999999999


Q ss_pred             ccCcc--cCCcEEEecCCCC
Q 019935          296 LDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++.  ..|+++++++|..
T Consensus       238 ~s~~~~~~tG~~~~vdgG~~  257 (260)
T 2zat_A          238 CSEDASYITGETVVVGGGTA  257 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTCC
T ss_pred             cCcccCCccCCEEEECCCcc
Confidence            98754  3589999999743

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=4.5e-27  Score=207.42  Aligned_cols=214  Identities=19%  Similarity=0.110  Sum_probs=159.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~~a~  160 (333)
                      |+||||||+||||++++++|+ +|++|++++|++...         .+   +.+|++|+++++ +++++  +|+||||||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~~---~~~Dl~~~~~~~-~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------GG---YKLDLTDFPRLE-DFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------TC---EECCTTSHHHHH-HHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------CC---ceeccCCHHHHH-HHHHhcCCCEEEECCc
Confidence            379999999999999999999 489999999987421         12   789999999988 77775  999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC------CccchhhhHHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL------PWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~------~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ..... ....+....+++|+.++.+++++++. ++ +||++||.++|+....      +..+.+.|+  .+|..+|.+++
T Consensus        67 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~--~sK~~~e~~~~  142 (273)
T 2ggs_A           67 MTDVD-KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYG--LSKLLGETFAL  142 (273)
T ss_dssp             CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH--HHHHHHHHHHC
T ss_pred             ccChh-hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHH--HHHHHHHHHHh
Confidence            75311 00123345788999999999998854 55 9999999999864322      223345565  66777888887


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      .  ++++++||+.+ +|+ . .....+......+......++   .+++++++|+|++++.+++++.  +++||+++   
T Consensus       143 ~--~~~~~iR~~~v-~G~-~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~--~g~~~i~~---  209 (273)
T 2ggs_A          143 Q--DDSLIIRTSGI-FRN-K-GFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK--TGIIHVAG---  209 (273)
T ss_dssp             C--TTCEEEEECCC-BSS-S-SHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC--CEEEECCC---
T ss_pred             C--CCeEEEecccc-ccc-c-HHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc--CCeEEECC---
Confidence            7  89999999966 562 2 223333333333444444433   7899999999999999998754  45899987   


Q ss_pred             CCCCCCcccHHHHHHHHhc
Q 019935          314 EGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       314 ~~~~~~~~s~~e~~~~i~~  332 (333)
                           +.+++.|+++.+++
T Consensus       210 -----~~~s~~e~~~~~~~  223 (273)
T 2ggs_A          210 -----ERISRFELALKIKE  223 (273)
T ss_dssp             -----CCEEHHHHHHHHHH
T ss_pred             -----CcccHHHHHHHHHH
Confidence                 55899999998864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=1.4e-26  Score=202.87  Aligned_cols=223  Identities=16%  Similarity=0.077  Sum_probs=157.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.......  ..++.++.+|++|+++++ +++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~   81 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQ-KMIEQIDEKF   81 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHc
Confidence            4567899999999999999999999999999999999877665543221  457889999999998887 544       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|+||||||......   ...+.....+++|+.+++++++++     +. +.++||++||..++.    +......|+
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  157 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD----AGPGVIHSA  157 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS----CCTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc----CCCCcHHHH
Confidence            38999999999754211   111223346789999999999976     22 467999999998875    444556677


Q ss_pred             HHHH-----HHHHHHHHH-hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.     .+.+...+. ..|+++++|+||.+ +++.......  ..    ......+....+...+.+++|+|+++++
T Consensus       158 asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v-~t~~~~~~~~--~~----~~~~~~~~~~~p~~r~~~pedvA~~v~~  230 (257)
T 3imf_A          158 AAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPI-ERTGGADKLW--IS----EEMAKRTIQSVPLGRLGTPEEIAGLAYY  230 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCB-SSCCCC-------------CCSHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCeEEEEEEECCC-cCCcchhhcc--cC----HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            6664     233334444 67999999999955 6654321100  00    0000011122344578999999999999


Q ss_pred             hccCcc--cCCcEEEecCCCC
Q 019935          295 ALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++.  ..|+++++++|..
T Consensus       231 L~s~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          231 LCSDEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HcCchhcCccCCEEEECCCcc
Confidence            998765  4599999999854

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=1.1e-26  Score=203.92  Aligned_cols=214  Identities=16%  Similarity=0.167  Sum_probs=154.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ ++++       ++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~i   82 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDVTQPAQWK-AAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCTTCHHHHH-HHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hcCceEEEecCCCHHHHH-HHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999987766544322 235888999999999888 5555       89


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......|+.+|.
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  158 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----GTVACHGYTATKF  158 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC----CCCCchhHHHHHH
Confidence            99999999764211   111222346788999998887754    2 3678999999998875    3344556776654


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .     +.+...+...|+++++|+||.+ +++....         . .....    ......+++++|+|++++++++++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~---------~-~~~~~----~~~~~~~~~~~dvA~~v~~l~s~~  223 (260)
T 1nff_A          159 AVRGLTKSTALELGPSGIRVNSIHPGLV-KTPMTDW---------V-PEDIF----QTALGRAAEPVEVSNLVVYLASDE  223 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCB-CSGGGTT---------S-CTTCS----CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEeCCC-CCCcccc---------c-hhhHH----hCccCCCCCHHHHHHHHHHHhCcc
Confidence            2     2233444557999999999955 5554220         0 01110    123356899999999999999875


Q ss_pred             c--cCCcEEEecCCCCC
Q 019935          300 F--TEGEIYEINSVEGE  314 (333)
Q Consensus       300 ~--~~g~~~~v~~g~~~  314 (333)
                      .  ..|+.|++++|...
T Consensus       224 ~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          224 SSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCcCCEEEECCCeec
Confidence            4  34899999998543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.94  E-value=6.4e-27  Score=205.39  Aligned_cols=227  Identities=15%  Similarity=0.167  Sum_probs=154.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhc----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+...+...    ..++.++.+|++|+++++ ++++    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDID-RLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHH-HHHHHHHH
Confidence            3567899999999999999999999999999999999876655432221    227889999999999888 6654    


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  158 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR----PWQDLALSN  158 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHH
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC----CCCCCchhH
Confidence              5999999999753211   111223346788999998888855     23678999999998875    344556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHH--HhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK--ATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|.     .+.+...+...|+++++|+||.+ +++...........  ..........+....+...+++++|+|++++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~  237 (260)
T 2z1n_A          159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVA  237 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHH-HHCCCC-----------------------CCTTSSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCc-ccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence            6653     23444455667999999999955 55543310000000  0000000011112223456889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.++.  ..|+.+++++|
T Consensus       238 ~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          238 FLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHhCccccCCCCCEEEeCCC
Confidence            9998754  45899999986

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.94  E-value=1.3e-26  Score=205.71  Aligned_cols=228  Identities=13%  Similarity=0.050  Sum_probs=157.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-------------CcchhhhhhccC--CCCceEEEEccCCCc
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-------------DPEKATTLFGKQ--DEETLQVCKGDTRNP  141 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-------------~~~~~~~~~~~~--~~~~~~~v~~D~~d~  141 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|             +.++.++.....  .+.++.++.+|++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            45678899999999999999999999999999999998             344433332211  156788999999999


Q ss_pred             CCCchhhh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEecccc
Q 019935          142 KDLDPAIF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGV  205 (333)
Q Consensus       142 ~~~~~~~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~  205 (333)
                      ++++ +++       .++|+||||||......   ...+.....+++|+.+++++++++     +.+ .++||++||..+
T Consensus        90 ~~v~-~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           90 AALR-ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHH-HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHH-HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            9887 554       38999999999864211   111222346779999999999976     223 578999999988


Q ss_pred             ccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcc
Q 019935          206 TKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKL  279 (333)
Q Consensus       206 ~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  279 (333)
                      +.    +......|+.+|.     .+.+...+...|+++++|+||.+ +++..... .......................
T Consensus       169 ~~----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (280)
T 3pgx_A          169 LK----ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSV-ETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN  243 (280)
T ss_dssp             TS----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS
T ss_pred             cc----CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc-cCcccchhhhhhhhhcCchhhhhhhhcccCCC
Confidence            75    4455667776664     23444555668999999999954 77664321 11111111111111111112223


Q ss_pred             cccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          280 IGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       280 ~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                       .+++++|+|++++++++++.  ..|+++++++|
T Consensus       244 -r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          244 -GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             -CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence             58999999999999998765  45999999986

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.8e-27  Score=206.78  Aligned_cols=213  Identities=15%  Similarity=0.165  Sum_probs=153.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++++|+||||||+|+||++++++|+++|++|++++|+.++..       ..++.++.+|++|+++++ ++++      
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   94 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETAD-RIVREGIERF   94 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHH-HHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHH-HHHHHHHHHC
Confidence            44567899999999999999999999999999999999875433       347889999999999887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..++...  +..+...|+.
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~~~~Y~~  172 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM--VGMPSALASL  172 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB--TTCCCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC--CCCccHHHHH
Confidence             8999999999864211   111223346779999999999965     3467899999998875421  2223455665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.+...+...|+++++|+||.+ +++.......   .         .+....+...+.+++|+|++++++.
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~~~~~~---~---------~~~~~~p~~r~~~~~dva~av~~L~  239 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVI-KTPMHPAETH---S---------TLAGLHPVGRMGEIRDVVDAVLYLE  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCB-CCTTSCGGGH---H---------HHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCC-CCCCCCHHHH---H---------HHhccCCCCCCcCHHHHHHHHHHhc
Confidence            5532     2223334456999999999954 7765432111   1         1112335567889999999999995


Q ss_pred             cCcccCCcEEEecCCC
Q 019935          297 DIEFTEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~~~g~~~~v~~g~  312 (333)
                      ......|+++++++|.
T Consensus       240 ~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          240 HAGFITGEILHVDGGQ  255 (260)
T ss_dssp             HCTTCCSCEEEESTTG
T ss_pred             ccCCCCCcEEEECCCe
Confidence            5544669999999973

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.94  E-value=8.5e-27  Score=204.61  Aligned_cols=221  Identities=13%  Similarity=0.076  Sum_probs=153.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|++++.+...+..  .+.++.++.+|++|+++++ +++       
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   84 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQ-ELMNTVANHF   84 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHHHT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHc
Confidence            467789999999999999999999999999999999987665443221  1456888999999998887 554       


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  160 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----AVPYEAVYG  160 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----CCCCcchHH
Confidence             57999999999754211   111222346789999999999976     24678999999998865    344456677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++......  .....      ....+....+...+++++|+|++++
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~dvA~~v~  233 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI-ATSLVEMTIQDPEQKE------NLNKLIDRCALRRMGEPKELAAMVA  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB-CSHHHHHHTTSHHHHH------HHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCC-CCcchhhhccChhhHH------HHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            66542     2233344456999999999955 443211000  00000      0001111233457899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.  ..|+++++++|
T Consensus       234 ~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          234 FLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHcCccccCCCCCEEEECCC
Confidence            9998654  45899999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.94  E-value=9.8e-27  Score=206.01  Aligned_cols=223  Identities=15%  Similarity=0.128  Sum_probs=157.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ +++       .
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g  102 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQII-AMVDACVAAFG  102 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHH-HHHHHHHHHcC
Confidence            3567899999999999999999999999999999999988776654433 567899999999998877 444       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.|++++++++     +++.++||++||..++.    +......|+.+
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~as  178 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV----AVGGTGAYGMS  178 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----CCCCchhHHHH
Confidence            8999999999864211   122223346788999999999966     23567999999998865    45556678776


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCC---CCcccccccHHHHHHHHHH
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ---GDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~a~~~  294 (333)
                      |.     .+.+..++...|+++++|+||.+ +++...    ...... ..........   ......+.+++|+|+++++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  252 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFV-DTPMQQ----TAMAMF-DGALGAGGARSMIARLQGRMAAPEEMAGIVVF  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHH----HHHTCC-------CCHHHHHHHHHSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCc-cCchHH----Hhhhcc-hhhHHHHhhhhhhhccccCCCCHHHHHHHHHH
Confidence            64     23344555678999999999955 544211    100000 0000000000   1123468899999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++..  ..|++++++||.
T Consensus       253 L~s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          253 LLSDDASMITGTTQIADGGT  272 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HcCCccCCccCcEEEECCcc
Confidence            998754  459999999973

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.94  E-value=8.1e-27  Score=204.66  Aligned_cols=215  Identities=15%  Similarity=-0.001  Sum_probs=148.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++++|+||||||+|+||++++++|+++|++|++++|+.++......   ..++.++.+|++|+++++ +++       
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~   97 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR---QAGAVALYGDFSCETGIM-AFIDLLKTQT   97 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH---HHTCEEEECCTTSHHHHH-HHHHHHHHHC
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH---hcCCeEEECCCCCHHHHH-HHHHHHHHhc
Confidence            456778999999999999999999999999999999999876543322   234789999999998887 544       


Q ss_pred             cCCcEEEEcCCCCCCCCCC--CCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 EGVTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      .++|+||||||........  .+.....+++|+.|++++++++     +.+.++||++||..++.    +......|+.+
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  173 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK----GSSKHIAYCAT  173 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT----CCSSCHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC----CCCCcHhHHHH
Confidence            3799999999976432111  1112246789999999999866     23568999999998876    45556677766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+.. ++++++|+||.+ .++...  ...+.         ..+........+.+++|+|++++++++
T Consensus       174 Kaa~~~l~~~la~e~~~-~Irvn~v~PG~v-~t~~~~--~~~~~---------~~~~~~~p~~r~~~~edva~~v~~L~~  240 (260)
T 3gem_A          174 KAGLESLTLSFAARFAP-LVKVNGIAPALL-MFQPKD--DAAYR---------ANALAKSALGIEPGAEVIYQSLRYLLD  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHTT-TCEEEEEEECTT-CC--------------------------CCSCCCCCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCC-CCEEEEEeeccc-ccCCCC--CHHHH---------HHHHhcCCCCCCCCHHHHHHHHHHHhh
Confidence            642     222333333 699999999955 544321  00000         011112334567789999999999997


Q ss_pred             CcccCCcEEEecCCC
Q 019935          298 IEFTEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~~~g~~~~v~~g~  312 (333)
                      .....|+++++++|.
T Consensus       241 ~~~itG~~i~vdGG~  255 (260)
T 3gem_A          241 STYVTGTTLTVNGGR  255 (260)
T ss_dssp             CSSCCSCEEEESTTT
T ss_pred             CCCCCCCEEEECCCc
Confidence            666779999999974

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.94  E-value=3.1e-27  Score=205.81  Aligned_cols=218  Identities=13%  Similarity=0.127  Sum_probs=157.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+...... +.++.++.+|++|+++++ ++++       +
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   80 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADISDPGSVK-ALFAEIQALTGG   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHH-HHHHHHHHHCCC
Confidence            467899999999999999999999999999999999988776654433 567899999999999887 5543       8


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CC-C-CCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~-~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++    +. + .++||++||...+.    +......|+.+
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  156 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA----GTPNMAAYVAA  156 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----TCTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc----CCCCchhhHHH
Confidence            999999999864211   112223446789999999999974    22 4 57999999998875    44555677766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |.     .+.+...+...|+++++|+||.+ .++.......        ...............+.+++|+|++++++++
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~--------~~~~~~~~~~~~~~r~~~pedva~~v~~L~s  227 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLI-ESDGVKASPH--------NEAFGFVEMLQAMKGKGQPEHIADVVSFLAS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTSGG--------GGGHHHHHHHSSSCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcC-cCccccccCh--------hHHHHHHhcccccCCCcCHHHHHHHHHHHhC
Confidence            64     24444556678999999999955 4432110000        0000000000234467899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      +..  ..|+++++++|
T Consensus       228 ~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          228 DDARWITGQTLNVDAG  243 (247)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             ccccCCCCCEEEECCC
Confidence            764  45999999997

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=6.5e-27  Score=205.82  Aligned_cols=228  Identities=14%  Similarity=0.079  Sum_probs=159.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....  .+.++.++.+|++|+++++ +++       
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVA-HLVDETMKAY   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHc
Confidence            357889999999999999999999999999999999987766543322  1567899999999999887 544       


Q ss_pred             cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||.....    ....+.....+++|+.+++++++++.    ...++||++||..++.    +......|+.
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  162 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH----SQAKYGAYKM  162 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC----CCTTCHHHHH
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc----CCCccHHHHH
Confidence            3799999999875311    11122233467889999999999762    2227999999998875    4445567776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh--cccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA--GERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|.     .+.+...+...|+++++|+||.+ +++.....+........  .......+....+...+.+++|+|+++++
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYI-WGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSC-BSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcc-ccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence            664     23444555668999999999955 55432111110000000  00001112234456679999999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++..  ..|+++++++|.
T Consensus       242 L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          242 MASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HcCccccCCCCCEEEECCCc
Confidence            998754  459999999974

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=2.2e-26  Score=201.34  Aligned_cols=218  Identities=14%  Similarity=0.093  Sum_probs=154.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.... +.++.++.+|++|+++++ ++++       ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQ-RVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHH-HHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecCCCHHHHH-HHHHHHHHHcCCC
Confidence            46789999999999999999999999999999999987776654433 456888999999998887 5554       89


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......|+.+|.
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~  156 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----GLALTSSYGASKW  156 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----CCCCchhHHHHHH
Confidence            99999999754211   111223346788999998777644    2 3678999999998875    3344566776654


Q ss_pred             H-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc-cHHHHHHHHHHhccC
Q 019935          225 K-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV-SRIVVAEACIQALDI  298 (333)
Q Consensus       225 k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~Dva~a~~~~l~~  298 (333)
                      .     +.+...+...|+++++|+||.+ +++..    .    ... ......+....+...++ +++|+|+++++++++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~----~----~~~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~  226 (254)
T 1hdc_A          157 GVRGLSKLAAVELGTDRIRVNSVHPGMT-YTPMT----A----ETG-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD  226 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHH----H----HHT-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccC-cCccc----c----ccc-hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCc
Confidence            2     3333445567999999999955 44321    1    111 11000011112334578 999999999999987


Q ss_pred             cc--cCCcEEEecCCCC
Q 019935          299 EF--TEGEIYEINSVEG  313 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~~  313 (333)
                      +.  ..|+.+++++|..
T Consensus       227 ~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          227 TSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhcCCCCCEEEECCCcc
Confidence            54  4589999999754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.2e-26  Score=205.72  Aligned_cols=222  Identities=12%  Similarity=0.089  Sum_probs=144.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++| +.+..+...+..  .+.++.++.+|++|+++++ ++++   
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~  102 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQ-ATVDAVV  102 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHH-HHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHH
Confidence            34567889999999999999999999999999999996 555444332211  1567899999999999988 5554   


Q ss_pred             ----CCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcC-----CC---CCeEEEEeccccccCCCCCc
Q 019935          151 ----GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SS---LKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~-----~~---~~~~v~~SS~~~~~~~~~~~  213 (333)
                          ++|+||||||......     ...+.....+++|+.|++++++++.     .+   .++||++||..++.    +.
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~  178 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----TS  178 (280)
T ss_dssp             HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred             HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----CC
Confidence                8999999999842111     1122334577899999999998661     12   56999999998865    44


Q ss_pred             cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       214 ~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .....|+.+|..     +.+...+...|+++++|+||.+ .++...........        .......+...+.+++|+
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~--------~~~~~~~p~~r~~~pedv  249 (280)
T 4da9_A          179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGII-RSDMTAAVSGKYDG--------LIESGLVPMRRWGEPEDI  249 (280)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB-CC------------------------------CCBCHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCC-cCCchhhcchhHHH--------HHhhcCCCcCCcCCHHHH
Confidence            455667766642     3334445567999999999955 55543211111100        011112344678999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+++++++++..  ..|++++++||-
T Consensus       250 A~~v~~L~s~~~~~itG~~i~vdGG~  275 (280)
T 4da9_A          250 GNIVAGLAGGQFGFATGSVIQADGGL  275 (280)
T ss_dssp             HHHHHHHHTSTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999998765  459999999973

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.94  E-value=6.7e-27  Score=207.38  Aligned_cols=222  Identities=13%  Similarity=0.063  Sum_probs=160.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .++.+|++|||||+|+||++++++|+++|++|++++|+.++.+.+.....  +.++.++.+|++|+++++ +++      
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~   82 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHE-ALVELAVRR   82 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHH-HHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHH
Confidence            45678999999999999999999999999999999999877665543322  457889999999998887 554      


Q ss_pred             -cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 -EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       .++|+||||||.....    ....+.....+++|+.|++++++++     +.+.++||++||..++..   +......|
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~~Y  159 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA---GFAGVAPY  159 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB---CCTTCHHH
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC---CCCCchhH
Confidence             3899999999975311    1112223446889999999999965     235679999999988621   34455667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch----HHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL----NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ .++.....+    ......         +....+...+.+++|+|+
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~~~p~~r~~~pedvA~  229 (280)
T 3tox_A          160 AASKAGLIGLVQALAVELGARGIRVNALLPGGT-DTPANFANLPGAAPETRGF---------VEGLHALKRIARPEEIAE  229 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB-SSTTSGGGSTTCCTHHHHH---------HHTTSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCC-CCchhhhhccccCHHHHHH---------HhccCccCCCcCHHHHHH
Confidence            76664     23344555667999999999955 666532211    111111         112234457899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++++++..  ..|++++++||..
T Consensus       230 ~v~~L~s~~a~~itG~~i~vdGG~~  254 (280)
T 3tox_A          230 AALYLASDGASFVTGAALLADGGAS  254 (280)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCccccCCcCcEEEECCCcc
Confidence            9999998754  4599999999854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=5.4e-27  Score=206.95  Aligned_cols=219  Identities=15%  Similarity=0.053  Sum_probs=157.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.....  +.++.++.+|++|+++++ ++++      
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVD-ALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHH-HHHHHHHHHc
Confidence            4678899999999999999999999999999999999877655432221  456888999999998887 5543      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.|++++++++.     .+.++||++||..++.    +......|+.
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  179 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----GNPGQVNYAA  179 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----CCCCchhHHH
Confidence             8999999999764211   1122233467899999999999662     3557999999998875    4455667776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ +++...........         .+....+...+.+++|+|+++++++
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~---------~~~~~~p~~r~~~pedvA~~v~~L~  249 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFI-DTDMTKGLPQEQQT---------ALKTQIPLGRLGSPEDIAHAVAFLA  249 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSHHHHHSCHHHHH---------HHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCC-cCcchhhcCHHHHH---------HHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            664     23444555667999999999955 44321110011111         1122344567899999999999999


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      +...  ..|+++++++|.
T Consensus       250 s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          250 SPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CCCcCCccCcEEEECCCc
Confidence            7654  459999999973

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=1.8e-26  Score=203.37  Aligned_cols=224  Identities=13%  Similarity=0.097  Sum_probs=154.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhc---
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++.+......    .+.++.++.+|++|+++++ ++++   
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~   87 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVE-AYVTATT   87 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH-HHHHHHH
Confidence            3467789999999999999999999999999999999987665443221    1356888999999998887 5543   


Q ss_pred             ----CCcEEEEcCCCCCC-CC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchh
Q 019935          151 ----GVTHVICCTGTTAF-PS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~-~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                          ++|+||||||.... ..   ...+.....+++|+.|++++++++    + .+.++||++||..++.    +.....
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  163 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR----GIGNQS  163 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----BCSSBH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc----CCCCCc
Confidence                79999999997542 10   111223346788999999887754    2 3678999999998865    344556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccccee----ecCCCCcccccccHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAV----LMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~Dv  288 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ +++..    ........ .....    .+....+...+++++|+
T Consensus       164 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~----~~~~~~~~-~~~~~~~~~~~~~~~p~~r~~~~~dv  237 (267)
T 1iy8_A          164 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAI-WTPMV----ENSMKQLD-PENPRKAAEEFIQVNPSKRYGEAPEI  237 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSHHH----HHHHHHHC-TTCHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCC-cCcch----hccccccC-hhhhhhHHHHHhccCCCCCCcCHHHH
Confidence            67766642     3334455567999999999955 54421    11000000 00000    11112234568999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |++++++++++.  ..|+.+++++|.
T Consensus       238 A~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          238 AAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999998753  458999999873

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.94  E-value=7.4e-27  Score=206.87  Aligned_cols=229  Identities=14%  Similarity=0.091  Sum_probs=154.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      |.++++|++|||||+|+||+++++.|+++|++|++++|++++.+......  .+.++.++.+|++|+++++ ++++    
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~   95 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIE-ALVAAVVE   95 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH-HHHHHHHH
Confidence            43567889999999999999999999999999999999987655433221  1456889999999998887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-CC------CCCeEEEEeccccccCCCCCccchh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS------SLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~~------~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                         ++|+||||||......   ...+.....+++|+.+++++++++ +.      +.++||++||..++.    +.....
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~  171 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----GVVHAA  171 (277)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS----CCTTCH
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc----CCCCCc
Confidence               7999999999754211   111122346788999999999965 32      457999999998764    334456


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-c-ccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-G-ERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ +++........+..... . ......+....+..++++++|+|+
T Consensus       172 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~  250 (277)
T 2rhc_B          172 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE  250 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSB-CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcC-cCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            67766542     2333444557999999999955 54431110000000000 0 000001111223457899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++++.  ..|+++++++|
T Consensus       251 ~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          251 MVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCchhcCCCCcEEEECCC
Confidence            9999998754  45899999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.94  E-value=6.9e-27  Score=206.17  Aligned_cols=217  Identities=16%  Similarity=0.092  Sum_probs=156.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++| +.+..+.+....  .+.++.++.+|++|+++++ ++++    
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~-~~~~~~~~  102 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVE-ALFAAVIE  102 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHH
Confidence            3567899999999999999999999999999999998 444443332211  1457889999999999887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         ++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..++.    +......|
T Consensus       103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  178 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM----GNPGQANY  178 (269)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH----CCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC----CCCCchhH
Confidence               8999999999864211   112223346789999999999965     23567999999998765    34455667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ +++.......   ...         ........+.+++|+|+++++
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~---~~~---------~~~~p~~r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFI-ATDMTSELAA---EKL---------LEVIPLGRYGEAAEVAGVVRF  245 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-TTSCSCHHHH---HHH---------GGGCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCC-cCcccccccH---HHH---------HhcCCCCCCCCHHHHHHHHHH
Confidence            76664     23444555667999999999954 6665432111   111         112344578999999999999


Q ss_pred             hccCcc---cCCcEEEecCCC
Q 019935          295 ALDIEF---TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~---~~g~~~~v~~g~  312 (333)
                      +++++.   ..|++++++||.
T Consensus       246 l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTS
T ss_pred             HhCCcccCCCcCCEEEECCCe
Confidence            998743   449999999973

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.94  E-value=7.5e-27  Score=207.06  Aligned_cols=224  Identities=14%  Similarity=0.083  Sum_probs=155.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ +++       
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~   99 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVH-AAVAAAVERF   99 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            346789999999999999999999999999999999987765543222  1457889999999999887 444       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C------CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P------SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      .++|+||||||......   ...+.....+++|+.|++++++++ +      .+.++||++||..++.    +......|
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~----~~~~~~~Y  175 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ----GVMYAAPY  175 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS----CCTTCHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc----CCCCChhH
Confidence            47899999999864211   111222345779999999999965 2      2567999999998875    44555677


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh------cccceeecCCCCcccccccHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA------GERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ +++..    ..+.....      .......+....+...+.+++|+
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  250 (279)
T 3sju_A          176 TASKHGVVGFTKSVGFELAKTGITVNAVCPGYV-ETPMA----ERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEV  250 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSB-CSHHH----HHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcc-cchHH----HHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHH
Confidence            76664     23334455567999999999955 44321    11100000      00000112233455678999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+++++++++..  ..|++++++||-
T Consensus       251 A~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          251 AGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             HHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             HHHHHHHhCccccCcCCcEEEECCCc
Confidence            999999998765  559999999973

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.94  E-value=1.3e-26  Score=203.00  Aligned_cols=216  Identities=12%  Similarity=0.095  Sum_probs=153.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------C
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------G  151 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------~  151 (333)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.++.....    ..++.++.+|++|+++++ ++++      +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~v~-~~~~~~~~~g~   79 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL----GDRARFAAADVTDEAAVA-SALDLAETMGT   79 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT----CTTEEEEECCTTCHHHHH-HHHHHHHHHSC
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc----CCceEEEECCCCCHHHHH-HHHHHHHHhCC
Confidence            3567889999999999999999999999999999999765544333    567899999999999887 5554      8


Q ss_pred             CcEEEEcCCCCCCC-------CCCCCCCCCCcchhHHHHHHHHHhcC-------------CCCCeEEEEeccccccCCCC
Q 019935          152 VTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALP-------------SSLKRIVLVSSVGVTKFNEL  211 (333)
Q Consensus       152 ~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~-------------~~~~~~v~~SS~~~~~~~~~  211 (333)
                      +|+||||||.....       ....+.....+++|+.+++++++++.             .+.++||++||..++.    
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  155 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD----  155 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C----
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC----
Confidence            99999999975310       11222334578899999999998662             2345899999998875    


Q ss_pred             CccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-cccccH
Q 019935          212 PWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVSR  285 (333)
Q Consensus       212 ~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v  285 (333)
                      +......|+.+|.     .+.+...+...|+++++|+||.+ .++..............         ..... ..+.++
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~---------~~~~~~~r~~~p  225 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLF-DTPLLASLPEEARASLG---------KQVPHPSRLGNP  225 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTC---CHHHHHHHH---------HTSSSSCSCBCH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCc-cChhhhhccHHHHHHHH---------hcCCCCCCccCH
Confidence            5556667776664     23444555677999999999955 66654322222211111         11122 468899


Q ss_pred             HHHHHHHHHhccCcccCCcEEEecCCC
Q 019935          286 IVVAEACIQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       286 ~Dva~a~~~~l~~~~~~g~~~~v~~g~  312 (333)
                      +|+|++++++++++...|++++++||-
T Consensus       226 ~dva~~v~~l~s~~~itG~~i~vdGG~  252 (257)
T 3tl3_A          226 DEYGALAVHIIENPMLNGEVIRLDGAI  252 (257)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEECCCc
Confidence            999999999999866779999999973

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-26  Score=200.47  Aligned_cols=216  Identities=13%  Similarity=0.026  Sum_probs=153.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~v  155 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+...  ..+++++.+|++|+++++ ++++   ++|+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~-~~~~~~~~id~v   80 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE--CPGIEPVCVDLGDWDATE-KALGGIGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--STTCEEEECCTTCHHHHH-HHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCCCcEEecCCCHHHHH-HHHHHcCCCCEE
Confidence            35678999999999999999999999999999999998776655432  235778899999999888 6665   58999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||||......   ...+.....+++|+.++.++++++.     .+ .++||++||..++.    +......|+.+|.. 
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~  156 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----TFPNLITYSSTKGAM  156 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHH
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC----CCCCcchhHHHHHHH
Confidence            99999754211   1111223467889999999998662     24 67999999998876    44455667766542 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                          +.....+...|+++++++||.+ +++....  ....+.....         .....+++++++|+|++++++++++
T Consensus       157 ~~~~~~~a~~~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          157 TMLTKAMAMELGPHKIRVNSVNPTVV-LTDMGKKVSADPEFARKLK---------ERHPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCB-TTHHHHHHTCCHHHHHHHH---------HHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCcc-cCccccccccCHHHHHHHH---------hcCCccCCCCHHHHHHHHHHHhCch
Confidence                1122233446999999999955 6653211  0111111111         1123468999999999999999875


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+.+++++|
T Consensus       227 ~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          227 SASTSGGGILVDAG  240 (244)
T ss_dssp             GTTCCSSEEEESTT
T ss_pred             hhcccCCEEEECCC
Confidence            4  34889999986

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.94  E-value=3.8e-26  Score=201.92  Aligned_cols=218  Identities=13%  Similarity=0.074  Sum_probs=152.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+...+..  .+.++.++.+|++|+++++ +++       
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   96 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERD-KLMQTVAHVF   96 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            467789999999999999999999999999999999987665443221  1456889999999998887 544       


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~  172 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----ALPSVSLYS  172 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC----CCCCcchhH
Confidence             67999999999754211   111122335678999999999966     23568999999999876    444556677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH------HHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN------TLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++.......      .+.....         ...+...+++++|+|
T Consensus       173 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~p~dvA  242 (273)
T 1ae1_A          173 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVI-LTPLVETAIKKNPHQKEEIDNFI---------VKTPMGRAGKPQEVS  242 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-C-------------CHHHHHHHH---------HHSTTCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCC-cCchhhhhhhcccCcHHHHHHHH---------hcCCCCCCcCHHHHH
Confidence            66642     3333445567999999999955 6665321111      1111110         012234688999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++.+.  ..|+++++++|
T Consensus       243 ~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          243 ALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCccccCcCCCEEEECCC
Confidence            99999998654  35899999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=5.1e-26  Score=198.23  Aligned_cols=216  Identities=16%  Similarity=0.147  Sum_probs=152.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      ++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....   ...++.++.+|++|+++++ ++++       
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVN-AAIAATMEQFG   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHHhC
Confidence            3578999999999999999999999999999999987665443221   1456889999999999887 5554       


Q ss_pred             CCcEEEEcCCCCCCCC------CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 GVTHVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      ++|+||||||......      ...+.....+++|+.++.++++++    + .+.++||++||..++.    +......|
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  155 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV----AFPGRSAY  155 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHH
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc----CCCCchhH
Confidence            8999999999754211      011122346678999998888755    2 2678999999998875    33445667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|..     +.+...+...|+++++++||.+ +++......  ..+.....         .......+++++|+|+++
T Consensus       156 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~  225 (250)
T 2cfc_A          156 TTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMI-ETPMTQWRLDQPELRDQVL---------ARIPQKEIGTAAQVADAV  225 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSTTTHHHHTSHHHHHHHH---------TTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcC-ccCccccccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHH
Confidence            766542     2223334456999999999955 777643211  11111111         112334688999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++.  ..|+.+++++|
T Consensus       226 ~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          226 MFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             HHHHSTTCTTCCSCEEEESTT
T ss_pred             HHHcCchhhcccCCEEEECCc
Confidence            99998754  34899999986

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.94  E-value=2.4e-26  Score=200.14  Aligned_cols=218  Identities=13%  Similarity=0.032  Sum_probs=158.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....  .+.++.++.+|++|+++++ +++       
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   80 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQ-NFFAEIKAEN   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHc
Confidence            456789999999999999999999999999999999987765543222  1457899999999998887 544       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......|+.
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  156 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA----GNPGQTNYCA  156 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----CCCCcHHHHH
Confidence            36899999999864211   112223346788999999999865     23557999999998875    4445567776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ .++............         +....+...+++++|+|+++++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~i~~l~  226 (247)
T 3lyl_A          157 AKAGVIGFSKSLAYEVASRNITVNVVAPGFI-ATDMTDKLTDEQKSF---------IATKIPSGQIGEPKDIAAAVAFLA  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTTTTSCHHHHHH---------HHTTSTTCCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCcE-ecccchhccHHHHHH---------HhhcCCCCCCcCHHHHHHHHHHHh
Confidence            664     23333445567999999999955 666543322222111         122334567899999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      .++.  ..|+++++++|
T Consensus       227 s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          227 SEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CCCcCCccCCEEEECCC
Confidence            8754  45999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=3.4e-26  Score=201.54  Aligned_cols=220  Identities=15%  Similarity=0.095  Sum_probs=153.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.++.+......   .+.++.++.+|++|+++++ ++++   
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~   94 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVK-KLLEAVK   94 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHH
Confidence            44567899999999999999999999999999999999987655433211   1456888999999998887 5543   


Q ss_pred             ----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccc-cccCCCCCccchh
Q 019935          151 ----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVG-VTKFNELPWSIMN  217 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~-~~~~~~~~~~~~~  217 (333)
                          ++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||.. ...    +.....
T Consensus        95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----~~~~~~  170 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----TMPNIS  170 (267)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----CSSSCH
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc----CCCCCh
Confidence                7999999999764211   111122346788999999998865    3 3678999999988 443    334455


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ .++......  ........         .......+++++|+|+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~~~~~p~dvA~  240 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWY-RTKMTEAVFSDPEKLDYML---------KRIPLGRTGVPEDLKG  240 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CSTTTHHHHTCHHHHHHHH---------HTCTTSSCBCGGGGHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccC-ccccccccccChHHHHHHH---------hhCCCCCCcCHHHHHH
Confidence            67766532     3333445567999999999955 555432111  11111110         1122346889999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.++.  ..|+.+.+++|
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHcCccccCCcCCeEEECCC
Confidence            9999998754  45899999986

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.94  E-value=2.1e-27  Score=209.70  Aligned_cols=220  Identities=11%  Similarity=0.044  Sum_probs=159.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+.++.++..+..  .+.++.++.+|++|+++++ ++++    
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~   99 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEII-EAFARLDE   99 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHH
Confidence            35678899999999999999999999999999999999987765543322  1457889999999999887 5554    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         ++|+||||||......   ...++....+++|+.|++++++++     +.+.++||++||...+.    +......|
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~----~~~~~~~Y  175 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL----ARATVAPY  175 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----BCTTCHHH
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC----CCCCchhH
Confidence               7999999999864211   112223346889999999998865     12567999999998865    44556677


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ +++......  +.+...         +....+...+.+++|+|+++
T Consensus       176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~---------~~~~~p~~r~~~pedva~~v  245 (271)
T 4ibo_A          176 TVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYM-LTDMNQALIDNPEFDAW---------VKARTPAKRWGKPQELVGTA  245 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSGGGHHHHHCHHHHHH---------HHHHSTTCSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccE-eCcchhhcccCHHHHHH---------HHhcCCCCCCcCHHHHHHHH
Confidence            76664     23344455667999999999955 554322110  011111         11123445788999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++....  ..|+++++++|
T Consensus       246 ~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          246 VFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCCCcEEEECCC
Confidence            99998754  45999999997

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=5e-26  Score=198.40  Aligned_cols=219  Identities=12%  Similarity=0.109  Sum_probs=149.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccCCCCceEEEEccCCCcCCCchhh-------hc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++ ++.+...... +.++.++.+|++|+++++ ++       +.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   81 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVE-AFGKQVISTFG   81 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeecCCHHHHH-HHHHHHHHHcC
Confidence            35678999999999999999999999999999999987 5554322111 457889999999998887 54       35


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......|+.+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  157 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----KIEAYTHYIST  157 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----CCSSCHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----CCCCchhHHHH
Confidence            8999999999764211   111222346789999999998864    2 3678999999998876    34455667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |.     .+.+...+...|+++++|+||.+ +++........  . .  ......+.  .....+++++|+|++++++++
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~--~-~--~~~~~~~~--~~~~~~~~p~dva~~~~~l~s  229 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLV-RTATTEASALS--A-M--FDVLPNML--QAIPRLQVPLDLTGAAAFLAS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------CTT--SSSCSCCCTHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcC-cCccchhcccc--c-h--hhHHHHhh--CccCCCCCHHHHHHHHHHHcC
Confidence            54     23334455567999999999955 55542200000  0 0  00000000  233468999999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ++.  ..|+.+++++|
T Consensus       230 ~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          230 DDASFITGQTLAVDGG  245 (249)
T ss_dssp             GGGTTCCSCEEEESSS
T ss_pred             cccCCCCCcEEEECCC
Confidence            753  45899999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=9.6e-27  Score=208.61  Aligned_cols=232  Identities=12%  Similarity=0.040  Sum_probs=158.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhhc----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      .++++|+||||||+|+||++++++|+++|++|++++|+.++.+.......   +.++.++.+|++|+++++ ++++    
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~  100 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQ-NTVSELIK  100 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHH-HHHHHHHH
Confidence            35677899999999999999999999999999999999876654432211   346889999999998887 5443    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc------CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~------~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         ++|+||||||......   ...+.....+++|+.++.++++++      +.+.++||++||..++.    +..+...
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~  176 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET----GSGFVVP  176 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH----CCTTCHH
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc----CCCCcch
Confidence               6799999999753211   111223346788999999998865      22557999999998865    3345556


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCC-CCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPY-TSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      |+.+|..     +.....+...|+++++|+||.+ +++. ......  ......         ....+...+++++|+|+
T Consensus       177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~p~~~~~~~~dva~  246 (302)
T 1w6u_A          177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI-KTKGAFSRLDPTGTFEKEM---------IGRIPCGRLGTVEELAN  246 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CC------CCTTSHHHHHH---------HTTCTTSSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccC-CCcchhhhcccchhhHHHH---------HhcCCcCCCCCHHHHHH
Confidence            7766542     2222333457999999999955 5552 111000  000011         11123346889999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHh
Q 019935          291 ACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                      ++++++.++.  ..|++|++++|       ...++.|+++.+.
T Consensus       247 ~~~~l~~~~~~~~~G~~~~v~gg-------~~~~~~~~~~~~~  282 (302)
T 1w6u_A          247 LAAFLCSDYASWINGAVIKFDGG-------EEVLISGEFNDLR  282 (302)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTT-------HHHHHHSTTGGGG
T ss_pred             HHHHHcCCcccccCCCEEEECCC-------eeeccCCccccch
Confidence            9999998654  35899999996       5566677665554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.94  E-value=1.8e-26  Score=202.68  Aligned_cols=219  Identities=15%  Similarity=0.090  Sum_probs=151.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--C-------CceEEEEccCCCcCCCchhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--E-------ETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~-------~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+.....  +       .++.++.+|++|+++++ +++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAAR-CLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHH-HHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHH-HHH
Confidence            3567899999999999999999999999999999999877665443221  1       56889999999998877 554


Q ss_pred             c-------CC-cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCC
Q 019935          150 E-------GV-THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       150 ~-------~~-d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~  212 (333)
                      +       ++ |+||||||......   ...+.....+++|+.++.++++++.     .+ .++||++||..++.    +
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV----G  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----C
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc----C
Confidence            4       45 99999999764211   1122233467899999999999762     24 57999999997754    3


Q ss_pred             ccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          213 WSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       213 ~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ..+...|+.+|..     +.+...+...|+++++||||.+ +++........+..         .+........+++++|
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~---------~~~~~~~~~~~~~~~d  228 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFI-ATPMTQKVPQKVVD---------KITEMIPMGHLGDPED  228 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSCC-------------------CTGGGCTTCSCBCHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecc-cccchhhcCHHHHH---------HHHHhCCCCCCCCHHH
Confidence            3445667766542     2223344457999999999954 77654321111110         0111123346889999


Q ss_pred             HHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          288 VAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       288 va~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +|+++++++.++.  ..|+.+++++|.
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          229 VADVVAFLASEDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            9999999998644  458999999973

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.93  E-value=7.6e-26  Score=202.04  Aligned_cols=223  Identities=13%  Similarity=0.092  Sum_probs=157.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc--hhhhhhccC--CCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~--~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+.+  ..+.+.+..  .+.++.++.+|++|+++++ +++   
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~  122 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFAR-SLVHKA  122 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHH-HHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHH-HHHHHH
Confidence            45678899999999999999999999999999999988733  222221111  1567889999999998877 443   


Q ss_pred             ----cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcC-CC--CCeEEEEeccccccCCCCCccchhh
Q 019935          150 ----EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-SS--LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~-~~--~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                          .++|+||||||......    ...+.....+++|+.|++++++++. ..  .++||++||..++.    +......
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~  198 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ----PSPHLLD  198 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS----CCTTCHH
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc----CCCCchH
Confidence                48999999999753111    1122234478899999999999763 22  25999999999876    4555667


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|.     .+.+...+...|+++++|+||.+ +++..       ............+........+.+++|+|++++
T Consensus       199 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~~-------~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  270 (294)
T 3r3s_A          199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPI-WTALQ-------ISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYV  270 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSHHH-------HTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcC-ccccc-------cccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            776664     23344455667999999999955 54320       000000111122333445567899999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++..  ..|++++++||.
T Consensus       271 ~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          271 YLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCccccCCCCCEEEECCCc
Confidence            9998754  459999999974

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=8.4e-26  Score=196.51  Aligned_cols=214  Identities=14%  Similarity=0.062  Sum_probs=152.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....   ++.++.+|++|+++++ +++       .++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~-~~~~~~~~~~g~i   78 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVE-RGFAEALAHLGRL   78 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHH-HHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCEEEEecCCCHHHHH-HHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999987776655432   3788999999998887 544       368


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||......   ...+.....+++|+.+++++++++    + ++.++||++||...++     ......|+.+|.
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----~~~~~~Y~asK~  153 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----NLGQANYAASMA  153 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----CTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC-----CCCchhHHHHHH
Confidence            99999999754211   111122346789999999998865    2 3578999999998332     233455665553


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           .+.+...+...|+++++|+||.+ .++...............         ......+++++|+|+++++++.++
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFI-ETRMTAKVPEKVREKAIA---------ATPLGRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTTSSSCHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcC-cCcchhhcCHHHHHHHHh---------hCCCCCCcCHHHHHHHHHHHhCch
Confidence                 34444556678999999999955 665433211111111110         112235889999999999999875


Q ss_pred             c--cCCcEEEecCCC
Q 019935          300 F--TEGEIYEINSVE  312 (333)
Q Consensus       300 ~--~~g~~~~v~~g~  312 (333)
                      .  ..|+.+.+++|.
T Consensus       224 ~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          224 SSFITGQVLFVDGGR  238 (245)
T ss_dssp             GTTCCSCEEEESTTT
T ss_pred             hcCCcCCEEEECCCc
Confidence            4  458999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=1.6e-26  Score=201.24  Aligned_cols=217  Identities=15%  Similarity=0.092  Sum_probs=152.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +++|++|||||+|+||++++++|+++|++|++++| ++++.+.+.+..  .+.++.++.+|++|+++++ ++++      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVT-NMVKQTVDVF   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHc
Confidence            45789999999999999999999999999999999 766554432211  1456888999999998887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......|+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  156 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT----GNPGQANYVA  156 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC----CCCCCchHHH
Confidence             8999999999754211   111223346789999988888755    2 3678999999998754    2334556776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ .++..............         ...+...+++++|+|+++++++
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~p~~~~~~~~dvA~~~~~l~  226 (246)
T 2uvd_A          157 AKAGVIGLTKTSAKELASRNITVNAIAPGFI-ATDMTDVLDENIKAEML---------KLIPAAQFGEAQDIANAVTFFA  226 (246)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-GGGCSSCCCTTHHHHHH---------HTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeccc-cCcchhhcCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHc
Confidence            654     23344555677999999999965 55543211111111110         0112346899999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      +++.  ..|+.+++++|
T Consensus       227 s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          227 SDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhcCCCCCEEEECcC
Confidence            8754  45899999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=4.4e-26  Score=201.79  Aligned_cols=222  Identities=17%  Similarity=0.144  Sum_probs=153.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++++|+||||||+|+||++++++|+++|++|++++|++++.+....... ..++.++.+|++|+++++ ++++     
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~  102 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGAR-RLAQALGEL  102 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHH-HHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHH-HHHHHHHHh
Confidence            345678999999999999999999999999999999999876654432221 126888999999998887 5443     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCC----CeEEEEeccccccCCCCCccch
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSL----KRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~----~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++     +.+.    ++||++||..++.    +....
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~----~~~~~  178 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS----AMGEQ  178 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC----CCCCS
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC----CCCCC
Confidence              7999999999754211   111222346789999999988865     1233    8999999998875    22233


Q ss_pred             h-hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          217 N-LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       217 ~-~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      . .|+.+|.     .+.+...+...|+++++|+||.+ .++................       ...+...+++++|+|+
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~-------~~~p~~r~~~p~dvA~  250 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRF-PSRMTRHIANDPQALEADS-------ASIPMGRWGRPEEMAA  250 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CSTTTHHHHHCHHHHHHHH-------HTSTTSSCCCHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccC-cCcchhhcchhHHHHHHhh-------cCCCCCCcCCHHHHHH
Confidence            3 5665553     23333445567999999999955 5554321111110111000       0123346899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.++.  ..|+++++++|
T Consensus       251 ~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          251 LAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCccccCCCCCEEEeCCC
Confidence            9999998754  45899999986

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.93  E-value=5.3e-27  Score=205.67  Aligned_cols=218  Identities=14%  Similarity=0.094  Sum_probs=155.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++|++|||||+|+||++++++|+++|++|+++ .|+.++.+...+..  .+.++.++.+|++|+++++ +++       .
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIK-EMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            46899999999999999999999999999997 78876655443221  1457899999999999887 444       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||.+++.    +......|+.+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  157 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR----YLENYTTVGVS  157 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS----BCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC----CCCCcHHHHHH
Confidence            7899999999754211   111122336789999999999866     23567999999998875    45556677776


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.+...+...|+++++|+||.+ .++......  ..+.....         ...+...+.+++|+|++++++
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~~L  227 (258)
T 3oid_A          158 KAALEALTRYLAVELSPKQIIVNAVSGGAI-DTDALKHFPNREDLLEDAR---------QNTPAGRMVEIKDMVDTVEFL  227 (258)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECCB-CSGGGGGCTTHHHHHHHHH---------HHCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCC-cChhhhhcccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHH
Confidence            642     3333445567999999999955 555432111  11111111         122345789999999999999


Q ss_pred             ccCcc--cCCcEEEecCCCC
Q 019935          296 LDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++.  ..|++++++||..
T Consensus       228 ~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          228 VSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             TSSTTTTCCSCEEEESTTGG
T ss_pred             hCcccCCccCCEEEECCCcc
Confidence            98754  4599999999853

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=1.6e-26  Score=203.40  Aligned_cols=220  Identities=13%  Similarity=0.054  Sum_probs=139.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +++++|+||||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ +++      
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   88 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPERE-KLMQTVSSM   88 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHH-HHHHHHHHH
Confidence            3467789999999999999999999999999999999987655433211  1446889999999998887 554      


Q ss_pred             --cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||......   ...+.....+++|+.++.++++++    + .+.++||++||..++.    +......|
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  164 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV----SASVGSIY  164 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------CCHH
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc----CCCCCchH
Confidence              67999999999754211   111222335788999999999976    2 3678999999998865    33445567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++....... .+..         .+........+++++|+|++++
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~  234 (266)
T 1xq1_A          165 SATKGALNQLARNLACEWASDGIRANAVAPAVI-ATPLAEAVYDDEFKK---------VVISRKPLGRFGEPEEVSSLVA  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSC-C----------------------------------CCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCC-ccchhhhhcCHHHHH---------HHHhcCCCCCCcCHHHHHHHHH
Confidence            766542     2222334456999999999955 6665322110 0000         0111122346889999999999


Q ss_pred             HhccCcc--cCCcEEEecCCC
Q 019935          294 QALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++.++.  ..|+.+++++|.
T Consensus       235 ~l~~~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          235 FLCMPAASYITGQTICVDGGL  255 (266)
T ss_dssp             HHTSGGGTTCCSCEEECCCCE
T ss_pred             HHcCccccCccCcEEEEcCCc
Confidence            9998653  358999999873

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=2.3e-26  Score=199.77  Aligned_cols=216  Identities=13%  Similarity=0.039  Sum_probs=153.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~v  155 (333)
                      ++++++||||||+|+||++++++|+++|++|++++|+.++.+.+....  .+++++.+|++|+++++ ++++   ++|+|
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~-~~~~~~~~id~v   80 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC--PGIEPVCVDLGDWEATE-RALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHH-HHHTTCCCCCEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCCCEEEEeCCCHHHHH-HHHHHcCCCCEE
Confidence            466789999999999999999999999999999999987766554322  35677899999999888 6664   68999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||||......   ...+.....+++|+.++.++++++.     .+ .++||++||..++.    +..+...|+.+|.. 
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~  156 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----AVTNHSVYCSTKGAL  156 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHH
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc----CCCCCchHHHHHHHH
Confidence            99999754211   1111223467889999999998662     24 68999999998876    44455667766542 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                          +.....+...|+++++|+||.+ +++.....  ...+....         ....+..++++++|+|++++++++++
T Consensus       157 ~~~~~~la~e~~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          157 DMLTKVMALELGPHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTM---------LNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCB-TTTTHHHHSCSTTHHHHH---------HHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeccc-cccchhhhccChHHHHHH---------HhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence                1222333446899999999955 66542210  00111111         11223457899999999999999875


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+.|++++|
T Consensus       227 ~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          227 SGMTTGSTLPVEGG  240 (244)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCCCCCEEEECCC
Confidence            3  45899999986

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=7.5e-26  Score=201.30  Aligned_cols=232  Identities=13%  Similarity=0.029  Sum_probs=155.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC------------cchhhhhhccC--CCCceEEEEccCCCcC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPK  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~D~~d~~  142 (333)
                      |.++++|+||||||+|+||++++++|+++|++|++++|+            .+..+......  .+.++.++.+|++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            567788999999999999999999999999999999987            32222221111  1567899999999999


Q ss_pred             CCchhhhc-------CCcEEEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCC--
Q 019935          143 DLDPAIFE-------GVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFN--  209 (333)
Q Consensus       143 ~~~~~~~~-------~~d~vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~--  209 (333)
                      +++ ++++       ++|+||||||...... ...+.....+++|+.+++++++++..   ..++||++||..++...  
T Consensus        85 ~v~-~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  163 (287)
T 3pxx_A           85 AVS-RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ  163 (287)
T ss_dssp             HHH-HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC
T ss_pred             HHH-HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc
Confidence            887 5443       8999999999865321 11223345788999999999997632   34699999998876421  


Q ss_pred             -----CCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc---cc----ceee
Q 019935          210 -----ELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG---ER----RAVL  272 (333)
Q Consensus       210 -----~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~---~~----~~~~  272 (333)
                           ..+......|+.+|..     +.+...+...|+++++|+||.+ +++.... ..........   ..    ....
T Consensus       164 ~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T 3pxx_A          164 PPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNV-NTDMLNS-APMYRQFRPDLEAPSRADALLAF  241 (287)
T ss_dssp             CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSB-SSTTTSS-HHHHHHHCTTSSSCCHHHHHHHG
T ss_pred             cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc-ccccccc-cchhhhhccccccchhHHHHhhh
Confidence                 1122445567766542     3333444556999999999955 6665432 1111000000   00    0000


Q ss_pred             cCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          273 MGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       273 ~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .........+++++|+|+++++++++..  ..|++++++||
T Consensus       242 ~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             GGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            0111112678999999999999998754  45999999997

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=6.8e-26  Score=199.16  Aligned_cols=219  Identities=13%  Similarity=0.135  Sum_probs=154.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ ++++       +
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~   86 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQ-TALALAKGKFGR   86 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCCCCHHHHH-HHHHHHHHHCCC
Confidence            467789999999999999999999999999999999987665544332 457899999999999888 6554       8


Q ss_pred             CcEEEEcCCCCCCCC---------CCCCCCCCCcchhHHHHHHHHHhcC-----C------CCCeEEEEeccccccCCCC
Q 019935          152 VTHVICCTGTTAFPS---------RRWDGDNTPEKVDWEGVRNLVSALP-----S------SLKRIVLVSSVGVTKFNEL  211 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~a~~-----~------~~~~~v~~SS~~~~~~~~~  211 (333)
                      +|+||||||......         ...+.....+++|+.++.++++++.     .      +.++||++||..++.    
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----  162 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----  162 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC----
Confidence            999999999764211         1111223467889999999998651     2      467999999998875    


Q ss_pred             CccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-cccccH
Q 019935          212 PWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVSR  285 (333)
Q Consensus       212 ~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v  285 (333)
                      +......|+.+|..     +.+...+...|+++++|+||.+ .++........+...         +...... ..++++
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  232 (265)
T 2o23_A          163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLF-GTPLLTSLPEKVCNF---------LASQVPFPSRLGDP  232 (265)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCC----------CH---------HHHTCSSSCSCBCH
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccc-cCccccccCHHHHHH---------HHHcCCCcCCCCCH
Confidence            33445667766642     2333445567999999999955 555432110000000         0001122 468899


Q ss_pred             HHHHHHHHHhccCcccCCcEEEecCCCC
Q 019935          286 IVVAEACIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       286 ~Dva~a~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      +|+|++++++++.+...|+.+++++|..
T Consensus       233 ~dva~~~~~l~~~~~~~G~~i~vdgG~~  260 (265)
T 2o23_A          233 AEYAHLVQAIIENPFLNGEVIRLDGAIR  260 (265)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhhcCccCceEEEECCCEe
Confidence            9999999999987667799999999743

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=6.9e-27  Score=209.08  Aligned_cols=228  Identities=12%  Similarity=0.069  Sum_probs=154.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CC---ceEEEEccCCCcCCCchhhhc-
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAIFE-  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~---~~~~v~~D~~d~~~~~~~~~~-  150 (333)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.++.+.......  +.   ++.++.+|++|+++++ ++++ 
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~   99 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQD-DIINT   99 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH-HHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHH-HHHHH
Confidence            445678999999999999999999999999999999999876655432211  22   6889999999998887 5543 


Q ss_pred             ------CCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCc-
Q 019935          151 ------GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPW-  213 (333)
Q Consensus       151 ------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~-  213 (333)
                            ++|+||||||......     ...+.....+++|+.+++++++++.     .+ ++||++||..++.    +. 
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~----~~~  174 (297)
T 1xhl_A          100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP----QAH  174 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS----SCC
T ss_pred             HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc----CCC
Confidence                  8999999999754211     1112223467889999999998662     34 7999999998865    22 


Q ss_pred             cchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHH
Q 019935          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRI  286 (333)
Q Consensus       214 ~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  286 (333)
                      .....|+.+|..     +.+...+...|+++++|+||.+ +++.....  ........  ......+....+...+++++
T Consensus       175 ~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~r~~~pe  251 (297)
T 1xhl_A          175 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAV-ATGFMGAMGLPETASDKL--YSFIGSRKECIPVGHCGKPE  251 (297)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CSSHHHHTTCCHHHHHHH--HHHHHHCTTTCTTSSCBCHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC-cCccccccccccccccch--HHHHHHHHhcCCCCCCcCHH
Confidence            344567766542     3333445667999999999955 55532110  00000000  00000011122345689999


Q ss_pred             HHHHHHHHhccCc---ccCCcEEEecCCCC
Q 019935          287 VVAEACIQALDIE---FTEGEIYEINSVEG  313 (333)
Q Consensus       287 Dva~a~~~~l~~~---~~~g~~~~v~~g~~  313 (333)
                      |+|+++++++.++   ...|+.+++++|..
T Consensus       252 dvA~~v~~l~s~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          252 EIANIIVFLADRNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCCcccCCccCcEEEECCCcc
Confidence            9999999999875   25589999999743

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.93  E-value=9.6e-27  Score=203.66  Aligned_cols=224  Identities=15%  Similarity=0.113  Sum_probs=160.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------c
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|++++.+++.+.. +.++.++.+|++|+++++ +++       .
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   81 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIA-VLGAAAGQTLG   81 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHH-HHHHHHHHHhC
Confidence            3567899999999999999999999999999999999988776655433 467899999999998877 443       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++..   ..++||++||...+.    +.+....|+.+|.
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  157 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG----GHPGMSVYSASKA  157 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS----BCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC----CCCCchHHHHHHH
Confidence            7999999999864211   11222334688999999999997632   235899999999876    4556667876664


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                           .+.+...+...|+++++|+||.+ +++.....  .........     .......+...+.+++|+|++++++++
T Consensus       158 a~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~-----~~~~~~~p~~r~~~pedvA~~v~~L~s  231 (255)
T 4eso_A          158 ALVSFASVLAAELLPRGIRVNSVSPGFI-DTPTKGVAGITEAERAEFK-----TLGDNITPMKRNGTADEVARAVLFLAF  231 (255)
T ss_dssp             HHHHHHHHHHHHTGGGTCEEEEEEECSB-CCSSTTCTTSCHHHHHHHH-----HHHHHHSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEecCcc-cCcccccccCChhhHHHHH-----HHHhccCCCCCCcCHHHHHHHHHHHcC
Confidence                 23344455667999999999955 66643211  111000000     000112344568899999999999998


Q ss_pred             Ccc-cCCcEEEecCCCC
Q 019935          298 IEF-TEGEIYEINSVEG  313 (333)
Q Consensus       298 ~~~-~~g~~~~v~~g~~  313 (333)
                      +.. ..|++++++||..
T Consensus       232 ~~~~itG~~i~vdGG~~  248 (255)
T 4eso_A          232 EATFTTGAKLAVDGGLG  248 (255)
T ss_dssp             TCTTCCSCEEEESTTTT
T ss_pred             cCcCccCCEEEECCCcc
Confidence            622 4599999999854

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.93  E-value=1.5e-26  Score=203.03  Aligned_cols=226  Identities=11%  Similarity=0.070  Sum_probs=150.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCC---CCceEEEEccCCCcCCCchhhhc-----
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++ .+.+.....   +.++.++.+|++|+++++ ++++     
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVR-GLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHH-HHHHHHHHh
Confidence            456899999999999999999999999999999998766 544332211   346888999999998887 5543     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  156 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV----ASANKSAYV  156 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc----CCCCCchHH
Confidence              7999999999754211   111223346788999999999866     23568999999998865    334556677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh--hcccceeec-CCCCcccccccHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT--AGERRAVLM-GQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|..     +.+...+...|+++++|+||.+ +++.............  ........+ ....+...+++++|+|+++
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~  235 (260)
T 1x1t_A          157 AAKHGVVGFTKVTALETAGQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB-CC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCEEEEEEeecCc-cCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHH
Confidence            66542     2333444556999999999955 6664321111000000  000000001 1112345789999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++.  ..|+++++++|
T Consensus       236 ~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          236 VFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhChhhcCCCCCEEEECCC
Confidence            99998753  45899999986

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.93  E-value=2.4e-26  Score=201.19  Aligned_cols=223  Identities=13%  Similarity=0.093  Sum_probs=151.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhhhccCCCCceEEEEccCCCcCCCchhhhc-------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+..  +.+...  +.++.++.+|++|+++++ ++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH--GVKAVHHPADLSDVAQIE-ALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT--SCCEEEECCCTTSHHHHH-HHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhc--CCceEEEeCCCCCHHHHH-HHHHHHHHHcC
Confidence            4568999999999999999999999999999999987521  122211  456888999999999888 6655       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~s  154 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV----GSTGKAAYVAA  154 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc----CCCCchhHHHH
Confidence            8999999999754211   111222346788999988888754     34678999999998875    33445567766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccc--ceeec-CCCCcccccccHHHHHHHHHH
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER--RAVLM-GQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |..     +.+...+...|+++++|+||.+ +++......... .......  ....+ ....+...+++++|+|+++++
T Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~  232 (255)
T 2q2v_A          155 KHGVVGLTKVVGLETATSNVTCNAICPGWV-LTPLVQKQIDDR-AANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLF  232 (255)
T ss_dssp             HHHHHHHHHHHHHHTTTSSEEEEEEEESSB-CCHHHHHHHHHH-HHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCCC-cCcchhhhcccc-cccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            542     2333344456999999999955 554321100000 0000000  00011 233445679999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.++.  ..|+.|++++|
T Consensus       233 l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          233 LCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             HTSGGGTTCCSCEEEESTT
T ss_pred             HhCCccCCCCCCEEEECCC
Confidence            998754  34899999986

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.93  E-value=1.2e-25  Score=197.90  Aligned_cols=222  Identities=16%  Similarity=0.067  Sum_probs=157.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc----CCCCceEEEEccCCCcCCCchhhh----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++.+.....    ....++.++.+|++|+++++ +++    
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   82 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVR-AFAEACE   82 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHH-HHHHHHH
Confidence            356789999999999999999999999999999999998776554322    22345889999999998877 443    


Q ss_pred             ---cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhh
Q 019935          150 ---EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         .++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  158 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ----PEPHMVA  158 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS----CCTTBHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC----CCCCchh
Confidence               47899999999854211   112223346789999999999966    2 3567999999998875    4455667


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc----------hHHHHHHhhcccceeecCCCCcccccc
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD----------LNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      |+.+|.     .+.+...+...|+++++|+||.+ .++.....          ...+......       ....+...+.
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~~r~~  230 (265)
T 3lf2_A          159 TSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLV-ESGQWRRRFEAREERELDWAQWTAQLAR-------NKQIPLGRLG  230 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHHHHTC------CHHHHHHHHHH-------HTTCTTCSCB
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcC-cCchhhhhhhhhhhhccCHHHHHHHHhh-------ccCCCcCCCc
Confidence            776664     23444556677999999999955 54421100          0001000000       0113445788


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++|+|+++++++++..  ..|++++++||-
T Consensus       231 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          231 KPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            99999999999998754  459999999974

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=2.6e-26  Score=200.67  Aligned_cols=218  Identities=15%  Similarity=0.085  Sum_probs=152.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.... ..++.++.+|++|+++++ +++       .+
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWT-LVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHH-HHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccCCCHHHHH-HHHHHHHHHcCC
Confidence            356789999999999999999999999999999999987766554333 457889999999998877 444       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CC-CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++    ++ + ++||++||..++.    +......|+.+|
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----~~~~~~~Y~~sK  155 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL----PIEQYAGYSASK  155 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC----CCCCCccHHHHH
Confidence            899999999754211   111222346788999888877744    33 6 8999999998875    444556677665


Q ss_pred             HH-----HHHHHHHHhc--CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceee-cCC---CCcccccccHHHHHHHH
Q 019935          224 YK-----KMGEDFVQKS--GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVL-MGQ---GDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       224 ~k-----~~~e~~l~~~--gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~i~v~Dva~a~  292 (333)
                      ..     +.+...+...  |+++++|+||.+ +++...    ..   . ....... +..   ..+...+++++|+|+++
T Consensus       156 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v-~t~~~~----~~---~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  226 (253)
T 1hxh_A          156 AAVSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPMMQ----AS---L-PKGVSKEMVLHDPKLNRAGRAYMPERIAQLV  226 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEEEESEE-CCHHHH----HH---S-CTTCCHHHHBCBTTTBTTCCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEEEeCCc-cCchhh----hc---c-chhhhHHHHhhhhccCccCCCCCHHHHHHHH
Confidence            42     2333344455  999999999955 554311    00   0 0000000 111   12334689999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.  ..|+.+++++|.
T Consensus       227 ~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          227 LFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHcCccccCCCCcEEEECCCc
Confidence            99998764  448999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.93  E-value=1.6e-26  Score=202.14  Aligned_cols=222  Identities=15%  Similarity=0.075  Sum_probs=154.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhc
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFE  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~  150 (333)
                      ++++++|++|||||+++||+++++.|+++|++|++.+|+..+.        .....++++|++|+++++.      +.+.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578899999999999999999999999999999999975432        2234478999999988772      2345


Q ss_pred             CCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCcc-chhhh
Q 019935          151 GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS-IMNLF  219 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~-~~~~~  219 (333)
                      ++|++|||||......     ...++....+++|+.+++++++++     +++-++||++||.....    +.+ ....|
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~----~~~~~~~~Y  153 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL----PLPESTTAY  153 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTTCHHH
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc----CCCCccHHH
Confidence            8999999999754211     111223446889999999999865     23667999999998754    222 23456


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc-----ccceeecCCCCcccccccHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG-----ERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +.+|.     .+.+..++..+||++++|.||.+ ..+........+......     .+.....-...+...+..++|+|
T Consensus       154 ~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA  232 (261)
T 4h15_A          154 AAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWI-ETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCc-CCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHH
Confidence            65553     46677778889999999999955 443221111111111000     00001112234556789999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++++..  ..|+++.++||
T Consensus       233 ~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          233 NLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCccCcEEEECCc
Confidence            99999998765  45999999997

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.93  E-value=4.8e-26  Score=199.82  Aligned_cols=224  Identities=16%  Similarity=0.129  Sum_probs=153.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.... ..++.++.+|++|.++++ ++++       
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g   82 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADISKEADVD-AAVEAALSKFG   82 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTSHHHHH-HHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecCCCHHHHH-HHHHHHHHhcC
Confidence            4567899999999999999999999999999999999988777655433 567899999999998887 5543       


Q ss_pred             CCcEEEEcCCCCCCCCC----CCCCCCCCcchhHHHHHHHHHhcC-----CC----CCeEEEEeccccccCCCCCccchh
Q 019935          151 GVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALP-----SS----LKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~-----~~----~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                      ++|+||||||.......    ..+.....+++|+.++.++++++.     .+    ..+||++||..++.    +.....
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~  158 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----PRPNLA  158 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----CCTTCH
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----CCCCcc
Confidence            78999999997642111    112223467889999999998661     11    45799999998875    445556


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++.........     .......+....+...+++++|+|+++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAG-ETPLLTTFMGED-----SEEIRKKFRDSIPMGRLLKPDDLAEAA  232 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc-cChhhhhhcccC-----cHHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence            6776664     23344455667999999999954 555432111100     011111222334556799999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++...  ..|+++++++|..
T Consensus       233 ~~l~s~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          233 AFLCSPQASMITGVALDVDGGRS  255 (261)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHcCCcccCcCCcEEEecCCcc
Confidence            99998654  4599999999843

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=5e-26  Score=197.95  Aligned_cols=217  Identities=14%  Similarity=0.078  Sum_probs=141.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +++|+||||||+|+||++++++|+++|++|+++ .|+++..+...+..  .+.++.++.+|++|+++++ ++++      
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   81 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVE-NMVKTAMDAF   81 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHH-HHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHhc
Confidence            467899999999999999999999999999999 56665544332211  1456889999999998887 5554      


Q ss_pred             -CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||.....   ....+.....+++|+.++.++++++.     .+.++||++||.....    +......|+.
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~  157 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII----GNAGQANYAA  157 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------CHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc----CCCCCcHhHH
Confidence             899999999976421   11233344578899999999988652     3678999999986543    2334456776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.....+...|+++++++||.+ .++........+...         +....+...+++++|+|+++++++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~l~  227 (247)
T 2hq1_A          158 SKAGLIGFTKSIAKEFAAKGIYCNAVAPGII-KTDMTDVLPDKVKEM---------YLNNIPLKRFGTPEEVANVVGFLA  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTSCHHHHHH---------HHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEEEEE-eccchhhcchHHHHH---------HHhhCCCCCCCCHHHHHHHHHHHc
Confidence            6542     2223334556999999999955 443211101111111         111233456899999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      ..+.  ..|++|++++|
T Consensus       228 ~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          228 SDDSNYITGQVINIDGG  244 (247)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CcccccccCcEEEeCCC
Confidence            8753  35899999986

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=2.3e-26  Score=200.15  Aligned_cols=218  Identities=16%  Similarity=0.066  Sum_probs=152.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+....   .+.++.++.+|++|+++++ ++++     
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESIN-KAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHH-HHHHHHHHh
Confidence            356789999999999999999999999999999999987655443211   1457889999999999888 5554     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......|+
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~  158 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT----GNVGQVNYS  158 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH----CCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC----CCCCCchHH
Confidence              8999999999764211   111122346788999998888855     23678999999987654    223345666


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|..     +.+...+...|+++++++||.+ +++........+.....         ...+...+++++|+|++++++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l  228 (248)
T 2pnf_A          159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFI-ETDMTAVLSEEIKQKYK---------EQIPLGRFGSPEEVANVVLFL  228 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCGGGGGSCHHHHHHHH---------HTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEecee-cCchhhhccHHHHHHHH---------hcCCCCCccCHHHHHHHHHHH
Confidence            55532     2223344456999999999955 66543321111111111         111234689999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +.+..  ..|++|++++|
T Consensus       229 ~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          229 CSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhhcCCCcEEEeCCC
Confidence            98743  44899999986

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.93  E-value=8.6e-26  Score=197.05  Aligned_cols=218  Identities=14%  Similarity=0.052  Sum_probs=143.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+..        ..++.++.+|++|+++++ ++++       +
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~D~~d~~~~~-~~~~~~~~~~g~   74 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--------QYPFATEVMDVADAAQVA-QVCQRLLAETER   74 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--------CCSSEEEECCTTCHHHHH-HHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--------cCCceEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            45678999999999999999999999999999999986521        123788999999999887 5554       7


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  150 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT----PRIGMSAYGASK  150 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----CCCCCchHHHHH
Confidence            999999999754211   111223346788999999999966     23678999999998875    444556677665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-H-HHHH-HhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-N-TLLK-ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      ..     +.+...+...|+++++|+||.+ +++...... . .+.. ......  ..+....+...+++++|+|++++++
T Consensus       151 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~~l  227 (250)
T 2fwm_X          151 AALKSLALSVGLELAGSGVRCNVVSPGST-DTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLGKIARPQEIANTILFL  227 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------------CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCCEEEEEECCcc-cCccccccccChhHHHHHHhhhh--hcccccCCCCCCcCHHHHHHHHHHH
Confidence            42     3333445567999999999955 665432110 0 0000 000000  0000012334688999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.  ..|+.+.+++|.
T Consensus       228 ~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          228 ASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCccccCCCCCEEEECCCc
Confidence            98754  458999999873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.93  E-value=3.2e-26  Score=200.34  Aligned_cols=221  Identities=14%  Similarity=0.077  Sum_probs=158.1

Q ss_pred             CCCCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc---cCCCCceEEEEccCCCcCCCch-----
Q 019935           77 TPASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDP-----  146 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~D~~d~~~~~~-----  146 (333)
                      |+++++|++|||||+|  +||+++++.|+++|++|++.+|+++..+++.+   .....++.++.+|++|++++++     
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999876  99999999999999999999999876554432   2235678999999999988772     


Q ss_pred             -hhhcCCcEEEEcCCCCCCCC-------CCCCCCCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCCCCCccc
Q 019935          147 -AIFEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       147 -~~~~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                       +.+.++|++|||||......       ..++.....+++|+.+.+.+.+++.   ...++||++||.+...    +.+.
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~----~~~~  156 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF----AVQN  156 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS----CCTT
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc----Cccc
Confidence             23458999999999754211       0111112235678888888887552   1346999999998865    4455


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|.     .+.+..++..+||++++|.||.+ ..+.....  .+.+......         ..+...+..++|+
T Consensus       157 ~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~~~---------~~Pl~R~g~peev  226 (256)
T 4fs3_A          157 YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPI-RTLSAKGVGGFNTILKEIKE---------RAPLKRNVDQVEV  226 (256)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CSGGGTTCTTHHHHHHHHHH---------HSTTSSCCCHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCC-CChhhhhccCCHHHHHHHHh---------cCCCCCCcCHHHH
Confidence            566776664     46666778889999999999954 55443211  2222222211         1234567889999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+++++++++..  ..|+++.++||
T Consensus       227 A~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          227 GKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCccCCEEEECcC
Confidence            999999998765  45999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.93  E-value=4e-26  Score=202.75  Aligned_cols=229  Identities=13%  Similarity=0.032  Sum_probs=155.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.++.++......  +.++.++.+|++|+++++ +++     
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~  101 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMR-NAVRDLVL  101 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHH
Confidence            556778999999999999999999999999999999999877665543322  457889999999998887 444     


Q ss_pred             --cCCcEEEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhh
Q 019935          150 --EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                        .++|+||||||....  +  +...+.....+++|+.|++++++++    + .+.++||++||..++...  +......
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~--~~~~~~~  179 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF--TTPGATA  179 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--CSTTCHH
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC--CCCCchH
Confidence              389999999997532  1  1111222346789999999999976    2 366899999998875411  2234456


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc--cccccHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL--IGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~Dva~a  291 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ .++.............  ...........+.  ..+.+++|+|++
T Consensus       180 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~r~~~pedvA~~  256 (283)
T 3v8b_A          180 YTATKAAQVAIVQQLALELGKHHIRVNAVCPGAI-ETNISDNTKLRHEEET--AIPVEWPKGQVPITDGQPGRSEDVAEL  256 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSB-SSCTTCCTTBCCHHHH--SCCCBCTTCSCGGGTTCCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCC-cCCcccccccccchhh--hhhhhhhhhcCccccCCCCCHHHHHHH
Confidence            7766542     3333444557999999999955 6665432110000000  0001111122233  568899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++..  ..|++++++||
T Consensus       257 v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          257 IRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHcCccccCCcCCEEEECcC
Confidence            999998754  45999999986

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.93  E-value=7.5e-26  Score=199.19  Aligned_cols=221  Identities=12%  Similarity=0.030  Sum_probs=155.3

Q ss_pred             CCCCCCCeEEEEcCCC-hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +..+++|++|||||+| +||++++++|+++|++|++++|+.++.+......   ...++.++.+|++|+++++ +++   
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~   95 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVD-ALITQT   95 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHH-HHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHH-HHHHHH
Confidence            4567889999999997 7999999999999999999999987665543221   2457999999999999887 544   


Q ss_pred             ----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEeccccccCCCCCccch
Q 019935          150 ----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                          .++|+||||||......   ...+.....+++|+.+++++++++     +. +.++||++||..++.    +....
T Consensus        96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~  171 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR----AQHSQ  171 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC----CCTTC
T ss_pred             HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC----CCCCC
Confidence                37899999999754211   111223346788999999999865     22 457899999998875    45566


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++.......        ......+........+++++|+|++
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~--------~~~~~~~~~~~~~~r~~~~~dva~~  242 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIA-RHKFLEKTSS--------SELLDRLASDEAFGRAAEPWEVAAT  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CC-------------------------CCTTSSCCCHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcc-cchhhhccCc--------HHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            678776642     3333445567999999999955 5554221100        1111122233455678999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++.  ..|+++++++|
T Consensus       243 i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          243 IAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHcCccccCccCCEEEEcCC
Confidence            999998754  45999999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.2e-26  Score=199.24  Aligned_cols=215  Identities=14%  Similarity=0.097  Sum_probs=152.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---hcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~~~~d~v  155 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+.+. .  ..++.++.+|++|+++++ ++   +.++|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~-~~~~~~~~id~l   78 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K--YPGIQTRVLDVTKKKQID-QFANEVERLDVL   78 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G--STTEEEEECCTTCHHHHH-HHHHHCSCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h--ccCceEEEeeCCCHHHHH-HHHHHhCCCCEE
Confidence            456789999999999999999999999999999999987776654 2  237889999999998887 54   4589999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCcc-chhhhHHHHHH-
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS-IMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~-~~~~~~~~k~k-  225 (333)
                      |||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++..    .. ....|+.+|.. 
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~~Y~~sK~a~  154 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK----GVVNRCVYSTTKAAV  154 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB----CCTTBHHHHHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC----CCCCCccHHHHHHHH
Confidence            99999764211   111122345788999999999965     236789999999987652    22 44567665542 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch------HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL------NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                          +.+...+...|+++++|+||.+ +++......      .......         ........+++++|+|++++++
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dvA~~v~~l  224 (246)
T 2ag5_A          155 IGLTKSVAADFIQQGIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDF---------LKRQKTGRFATAEEIAMLCVYL  224 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCE-ECHHHHHHHHHSSSHHHHHHHH---------HHTCTTSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeeCcC-cCcchhhhhhcccCcHHHHHHH---------HhcCCCCCCCCHHHHHHHHHHH
Confidence                2233344556999999999955 554311100      0000000         0112234689999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.  ..|+.+++++|
T Consensus       225 ~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          225 ASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HSGGGTTCCSCEEEECTT
T ss_pred             hCccccCCCCCEEEECCC
Confidence            98754  45899999986

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-26  Score=205.85  Aligned_cols=227  Identities=13%  Similarity=0.076  Sum_probs=154.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CC---ceEEEEccCCCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~---~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.......  ..   ++.++.+|++|+++++ +++    
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   81 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQD-QIINSTL   81 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHH-HHHHHHH
Confidence            4567899999999999999999999999999999999876655432211  22   6889999999998887 544    


Q ss_pred             ---cCCcEEEEcCCCCCCCC-------CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCcc
Q 019935          150 ---EGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                         .++|+||||||......       ...+.....+++|+.+++++++++.     .+ ++||++||..++...   ..
T Consensus        82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---~~  157 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA---QP  157 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC---CC
T ss_pred             HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC---CC
Confidence               37999999999754211       1111223467889999999999662     24 899999999886521   13


Q ss_pred             chhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       215 ~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ....|+.+|..     +.+...+...|+++++|+||.+ +++.....  ........  ......+....+...+++++|
T Consensus       158 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~ped  234 (280)
T 1xkq_A          158 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKF--YNFMASHKECIPIGAAGKPEH  234 (280)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCB-CSSHHHHTTCCHHHHHHH--HHHHHHCTTTCTTSSCBCHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcC-cCCcccccccccccccch--HHHHHHHHcCCCCCCCCCHHH
Confidence            45567766542     3333445667999999999955 66532111  00000000  000000111223456899999


Q ss_pred             HHHHHHHhccCc-c--cCCcEEEecCCCC
Q 019935          288 VAEACIQALDIE-F--TEGEIYEINSVEG  313 (333)
Q Consensus       288 va~a~~~~l~~~-~--~~g~~~~v~~g~~  313 (333)
                      +|++++++++++ .  ..|+.+++++|..
T Consensus       235 vA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          235 IANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            999999999875 3  4589999999754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.93  E-value=2.9e-26  Score=200.71  Aligned_cols=220  Identities=13%  Similarity=0.077  Sum_probs=151.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------CC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------GV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------~~  152 (333)
                      +|++|||||+|+||++++++|+++|++|++++|++++.+.+....  .+.++.++.+|++|+++++ ++++       ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVF-AAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHHhCCC
Confidence            578999999999999999999999999999999987665443221  1456889999999998887 5554       89


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |+||||||......   ...+.....+++|+.+++++++++.     .+ .++||++||...+.    +......|+.+|
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  156 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----GNPELAVYSSSK  156 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----CCCCchhHHHHH
Confidence            99999999753211   1111223467889999999888651     24 67999999998764    334455677665


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh-h-----cccceeecCCCCcccccccHHHHHHHH
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT-A-----GERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .     .+.+...+...|+++++|+||.+ +++..    ..+.... .     .......+....+...+++++|+|+++
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  231 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIV-KTPMW----AEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV  231 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-SSHHH----HHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCC-ccchh----hhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            4     23333445567999999999955 54421    1111000 0     000000111122345689999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++.  ..|+.+.+++|
T Consensus       232 ~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          232 SYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHhCccccCCCCCEEEeCCC
Confidence            99998754  45899999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=2.5e-26  Score=201.37  Aligned_cols=220  Identities=12%  Similarity=0.124  Sum_probs=152.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      +|++|||||+|+||++++++|+++|++|++++|+.++  .+......  .+.++.++.+|++|+++++ ++++       
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFD-SAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH-HHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHHhC
Confidence            5799999999999999999999999999999998766  44432211  1456889999999998887 5543       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCC-CeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++.     .+. ++||++||..++.    +......|+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  156 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ----GFPILSAYST  156 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc----CCCCchhHHH
Confidence            8999999999764211   1112233467889999999998662     255 8999999998865    3444566776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh---cc--cc-eeecCCCCcccccccHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA---GE--RR-AVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~---~~--~~-~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      +|..     +.+...+...|+++++|+||.+ .++..    ........   ..  .. ...+....+...+++++|+|+
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  231 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIV-GTGMW----EQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAG  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CSHHH----HHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCcc-CChhh----hhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence            6642     3334455567999999999955 44321    11110000   00  00 001111223456899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++++.  ..|+.+++++|
T Consensus       232 ~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          232 LVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHhCcccCCCCCCEEEECCC
Confidence            9999998754  45899999987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=1.9e-26  Score=203.76  Aligned_cols=219  Identities=9%  Similarity=0.028  Sum_probs=155.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|++.. ++.....  ...++.++.+|++|+++++ ++.     
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~  103 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAA-NVAEELAA  103 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHTTTCEEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHh
Confidence            345778999999999999999999999999999999976432 2221111  1457889999999998877 433     


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||......   ...+.....+++|+.|++++++++     +.+.++||++||..++.    +......|+
T Consensus       104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~~~~Y~  179 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ----GGRNVAAYA  179 (273)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCSSCHHHH
T ss_pred             cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC----CCCCChhHH
Confidence             38999999999864211   112223346789999999999966     23668999999998875    445566777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|.     .+.+...+...|+++++|+||.+ +++......  ......         +....+...+.+++|+|++++
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~---------~~~~~p~~r~~~pedva~~v~  249 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYV-VTANTAALRADDERAAE---------ITARIPAGRWATPEDMVGPAV  249 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSGGGHHHHTSHHHHHH---------HHHHSTTSSCBCGGGGHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCC-cCCchhhcccCHHHHHH---------HHhcCCCCCCCCHHHHHHHHH
Confidence            6664     23344555668999999999955 555422100  001110         111233457899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++..  ..|++++++||
T Consensus       250 ~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          250 FLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhcCCcCCEEEECcC
Confidence            9998754  45999999997

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.93  E-value=4.2e-26  Score=200.76  Aligned_cols=204  Identities=17%  Similarity=0.135  Sum_probs=146.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.    ..++.++.+|++|+++++ ++++       +
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g~   87 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN----LPNTLCAQVDVTDKYTFD-TAITRAEKIYGP   87 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC----CTTEEEEECCTTCHHHHH-HHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh----cCCceEEEecCCCHHHHH-HHHHHHHHHCCC
Confidence            356789999999999999999999999999999999988776654    457889999999998887 5543       8


Q ss_pred             CcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.......   ..+.....+++|+.|++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~Y~asK  163 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----TFPDHAAYCGTK  163 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC----CCCCCchHHHHH
Confidence            9999999998642211   11122345789999999988865     23678999999998875    445556777666


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      ..     +.+...+...|+++++|+||.+ .++....... .........        ......+++++|+|++++++++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~--------~~~~~r~~~pedvA~av~~l~~  234 (266)
T 3p19_A          164 FAVHAISENVREEVAASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW--------RVDMGGVLAADDVARAVLFAYQ  234 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSB-SSSGGGGCSCHHHHHHHHHH--------HHHTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCcc-ccchhhcccchhhhHHHHhh--------cccccCCCCHHHHHHHHHHHHc
Confidence            42     3444555667999999999955 5654321111 111111000        0123468999999999999999


Q ss_pred             Ccc
Q 019935          298 IEF  300 (333)
Q Consensus       298 ~~~  300 (333)
                      ++.
T Consensus       235 ~~~  237 (266)
T 3p19_A          235 QPQ  237 (266)
T ss_dssp             SCT
T ss_pred             CCC
Confidence            865

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=8.8e-26  Score=197.89  Aligned_cols=220  Identities=14%  Similarity=0.104  Sum_probs=152.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+......  ...++.++.+|++|+++++ ++++      
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   88 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQ-NAVRSVHEQE   88 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHc
Confidence            456789999999999999999999999999999999976654432211  1456899999999999887 5553      


Q ss_pred             -CCcEEEEcCCCCC-CCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 -GVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 -~~d~vi~~a~~~~-~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       ++|+||||||... ...   ...+.....+++|+.++.++++++.     .+.++||++||..++...  +..+...|+
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~~Y~  166 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN--RPQQQAAYN  166 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCCHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC--CCCCccccH
Confidence             7999999999753 110   0111123457889999999998662     257899999999876421  222235677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|..     +.+...+...|+++++||||.+ +++......  +.+.....         .......+++++|+|++++
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~  236 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYI-ETTLTRFGMEKPELYDAWI---------AGTPMGRVGQPDEVASVVQ  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCTTTHHHHTCHHHHHHHH---------HTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeee-ccchhhcccCChHHHHHHH---------hcCCcCCCCCHHHHHHHHH
Confidence            65542     1222333447999999999955 777643111  11111111         1123346899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++.++.  ..|++|++++|
T Consensus       237 ~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          237 FLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhccCCCcEEEECCc
Confidence            9998643  45899999986

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=5.1e-26  Score=198.33  Aligned_cols=219  Identities=13%  Similarity=0.105  Sum_probs=151.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhc-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++.+....... ..+++++.+|++|+++++ ++++       
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWT-KLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHH-HHHHHHHHHhC
Confidence            3567899999999999999999999999999999999876654432221 257899999999998887 5544       


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCC-CeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|+||||||......   ...+.....+++|+.+++++++++    + .+. ++||++||..++.    +......|+.
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~  157 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----GDPSLGAYNA  157 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc----CCCCCccchH
Confidence            6999999999754211   111122346788999888877754    3 355 7999999998875    3345566776


Q ss_pred             HHHH-----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+.  ..|+++++|+||.+ +++...........        ..+........+++++|+|+++++
T Consensus       158 sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v-~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~dva~~~~~  228 (251)
T 1zk4_A          158 SKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDDLPGAEEA--------MSQRTKTPMGHIGEPNDIAYICVY  228 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCB-CCHHHHTSTTHHHH--------HTSTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcC-cchhhhhcCchhhh--------HHHhhcCCCCCCcCHHHHHHHHHH
Confidence            6542     11122233  67999999999955 55432110000000        001122234568999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.++.  ..|+.+++++|
T Consensus       229 l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          229 LASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HcCcccccccCcEEEECCC
Confidence            998754  35899999986

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.93  E-value=7.4e-26  Score=197.68  Aligned_cols=220  Identities=12%  Similarity=0.051  Sum_probs=151.5

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCce-EEEEccCCCcCCCchhhh------c
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAIF------E  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~D~~d~~~~~~~~~------~  150 (333)
                      +++++|+||||||+|+||++++++|+++|++|++++|++++.+...... ..++ .++.+|++|+++++ +++      .
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADVTDAEAMT-AAAAEAEAVA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCTTCHHHHH-HHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEecCCHHHHH-HHHHHHHhhC
Confidence            4567789999999999999999999999999999999987665543322 3456 88999999998887 554      5


Q ss_pred             CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||.......   ..+.....+++|+.++.++++++     +.+.++||++||..++...  +..+...|+.+
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~Y~~s  162 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN--RPQFASSYMAS  162 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCBHHHHHH
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC--CCCcchHHHHH
Confidence            89999999997642111   11112345678999988888755     2367899999999886522  22223567766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.....+...|+++++||||.+ +++......  +.+.....         .......+++++|+|++++++
T Consensus       163 K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l  232 (254)
T 2wsb_A          163 KGAVHQLTRALAAEWAGRGVRVNALAPGYV-ATEMTLKMRERPELFETWL---------DMTPMGRCGEPSEIAAAALFL  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CSHHHHHHHTCHHHHHHHH---------HTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEeccc-CchhhhccccChHHHHHHH---------hcCCCCCCCCHHHHHHHHHHH
Confidence            542     2222333456999999999955 554321100  01111111         112335689999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +.++.  ..|+.+++++|
T Consensus       233 ~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          233 ASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCcccccccCCEEEECCC
Confidence            98653  45899999985

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.93  E-value=1.6e-26  Score=201.73  Aligned_cols=205  Identities=14%  Similarity=0.154  Sum_probs=143.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc----CCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----GVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~----~~d~vi~  157 (333)
                      ||+||||||+||||++++++|+++|++|++++|++++.+.           .+.+|++|+++++ ++++    ++|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~-~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVA-AVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHH-HHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHH-HHHHHcCCCccEEEE
Confidence            3689999999999999999999999999999998754321           1568999988887 6665    8999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCC--------------------
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELP--------------------  212 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~--------------------  212 (333)
                      |||....    .......+++|+.++.++++++     +.+.++||++||..+++.....                    
T Consensus        69 ~Ag~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (255)
T 2dkn_A           69 CAGVGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAE  144 (255)
T ss_dssp             CCCCCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHH
T ss_pred             CCCCCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhcc
Confidence            9997531    2234557889999999999965     2256899999999988633100                    


Q ss_pred             --ccchhhhHHHHHHHHHHHHH-------HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          213 --WSIMNLFGVLKYKKMGEDFV-------QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       213 --~~~~~~~~~~k~k~~~e~~l-------~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                        ..+...|+.+  |..++.+.       ...|++++++|||.+ +++...    .+............+. + ...+++
T Consensus       145 ~~~~~~~~Y~~s--K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v-~~~~~~----~~~~~~~~~~~~~~~~-~-~~~~~~  215 (255)
T 2dkn_A          145 QQGQTHLAYAGS--KYAVTCLARRNVVDWAGRGVRLNVVAPGAV-ETPLLQ----ASKADPRYGESTRRFV-A-PLGRGS  215 (255)
T ss_dssp             HHCCHHHHHHHH--HHHHHHHHHHTHHHHHHTTCEEEEEEECCB-CSHHHH----HHHHCTTTHHHHHSCC-C-TTSSCB
T ss_pred             ccCCcchhHHHH--HHHHHHHHHHHHHHHhhcCcEEEEEcCCcc-cchhhh----hcccchhhHHHHHHHH-H-HhcCCC
Confidence              0234456655  44444333       336999999999955 555321    1111000001011111 2 456799


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++|+|++++++++++.  ..|+.|++++|
T Consensus       216 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  245 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQASFIHGSVLFVDGG  245 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCCCcccceeeEEEecCC
Confidence            99999999999998763  45899999996

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.93  E-value=2.9e-25  Score=196.44  Aligned_cols=215  Identities=12%  Similarity=0.084  Sum_probs=149.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccCC---CCceEEEEccCCCc----CCCchhhh--
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNP----KDLDPAIF--  149 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~---~~~~~~v~~D~~d~----~~~~~~~~--  149 (333)
                      +++|++|||||+|+||++++++|+++|++|++++| ++++.+.+.....   +.++.++.+|++|+    ++++ +++  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCE-DIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHH-HHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHH-HHHHH
Confidence            45689999999999999999999999999999999 8766554432221   34688999999999    7666 444  


Q ss_pred             -----cCCcEEEEcCCCCCCCCC---CC-----------CCCCCCcchhHHHHHHHHHhc-C---CCC------CeEEEE
Q 019935          150 -----EGVTHVICCTGTTAFPSR---RW-----------DGDNTPEKVDWEGVRNLVSAL-P---SSL------KRIVLV  200 (333)
Q Consensus       150 -----~~~d~vi~~a~~~~~~~~---~~-----------~~~~~~~~~n~~~~~~l~~a~-~---~~~------~~~v~~  200 (333)
                           .++|+||||||.......   ..           +.....+++|+.+++++++++ +   ++.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                 389999999997642111   11           112246788999999999966 2   233      799999


Q ss_pred             eccccccCCCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCC
Q 019935          201 SSVGVTKFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ  275 (333)
Q Consensus       201 SS~~~~~~~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  275 (333)
                      ||..++.    +......|+.+|..     +.+...+...|+++++|+||.+ +++ ... ...+......         
T Consensus       168 sS~~~~~----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v-~t~-~~~-~~~~~~~~~~---------  231 (276)
T 1mxh_A          168 CDAMTDL----PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS-LLP-PAM-PQETQEEYRR---------  231 (276)
T ss_dssp             CCGGGGS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-SCC-SSS-CHHHHHHHHT---------
T ss_pred             CchhhcC----CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc-cCC-ccC-CHHHHHHHHh---------
Confidence            9998875    44455667766642     3333445567999999999955 666 221 1222111111         


Q ss_pred             CCcccc-cccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          276 GDKLIG-EVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       276 ~~~~~~-~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ...... +++++|+|+++++++.++.  ..|+.+++++|
T Consensus       232 ~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          232 KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            112223 8999999999999998754  35899999986

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=2.9e-26  Score=203.09  Aligned_cols=222  Identities=14%  Similarity=0.107  Sum_probs=156.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.++.+......   .+.++.++.+|++|+++++ +++     
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~  101 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVM-AAVDQALK  101 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHH
Confidence            3567899999999999999999999999999999999987655433221   1567899999999998887 444     


Q ss_pred             --cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||......   ...+.....+++|+.+++++++++.     .+.++||++||..++.    +......|
T Consensus       102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  177 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR----GQALQVHA  177 (277)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH----TCTTCHHH
T ss_pred             HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----CCCCcHHH
Confidence              38999999999654211   1122233467899999999999651     2457999999998865    44455667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ +++..   ...+   .........+....+...+.+++|+|+++++
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~~---~~~~---~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~f  250 (277)
T 4fc7_A          178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPI-SGTEG---LRRL---GGPQASLSTKVTASPLQRLGNKTEIAHSVLY  250 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-SSSHH---HHHH---SCCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCE-ecchh---hhhc---cCCHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            76664     23444555667999999999955 54421   0000   0000000011112345578899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|++++++||
T Consensus       251 L~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          251 LASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HcCCccCCcCCCEEEECCC
Confidence            998754  45999999997

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.93  E-value=1.9e-25  Score=198.67  Aligned_cols=224  Identities=16%  Similarity=0.094  Sum_probs=155.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC----------------cchhhhhhccC--CCCceEEEEccCCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------------PEKATTLFGKQ--DEETLQVCKGDTRN  140 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~----------------~~~~~~~~~~~--~~~~~~~v~~D~~d  140 (333)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+                .++.++.....  ...++.++.+|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            4678999999999999999999999999999999987                33333322111  14578999999999


Q ss_pred             cCCCchhhh-------cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEecc
Q 019935          141 PKDLDPAIF-------EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSV  203 (333)
Q Consensus       141 ~~~~~~~~~-------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~  203 (333)
                      +++++ +++       .++|+||||||......    ...+.....+++|+.+++++++++.     .+ .++||++||.
T Consensus        88 ~~~v~-~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           88 YDALK-AAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             HHHHH-HHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             HHHHH-HHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            99887 554       38999999999764221    1122233467899999999999662     12 4699999999


Q ss_pred             ccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc---c------c
Q 019935          204 GVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE---R------R  269 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~---~------~  269 (333)
                      .++.    +......|+.+|.     .+.+...+...|+++++|+||.+ +++...... .+ ......   .      .
T Consensus       167 ~~~~----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~-~~-~~~~~~~~~~~~~~~~~  239 (286)
T 3uve_A          167 GGLK----AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHV-KTPMLHNEG-TF-KMFRPDLENPGPDDMAP  239 (286)
T ss_dssp             GGTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-SSTTTSSHH-HH-HHHCTTSSSCCHHHHHH
T ss_pred             hhcc----CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc-cCCcccccc-hh-hhccccccccchhhHHH
Confidence            8875    4455567776664     24444556678999999999955 666543211 00 111000   0      0


Q ss_pred             eeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          270 AVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       270 ~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ........+ ..+++++|+|+++++++++..  ..|++++++||
T Consensus       240 ~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          240 ICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             HHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence            000112222 578999999999999998754  45999999997

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.93  E-value=4.5e-26  Score=202.25  Aligned_cols=223  Identities=14%  Similarity=0.141  Sum_probs=159.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +.++.+|++|||||+|+||++++++|+++|++|++++|+.++.+.+.... ..++.++.+|++|+++++ ++++      
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~  102 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNVTSEDSVL-AAIEAANQLG  102 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHHHTTSS
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCCCCHHHHH-HHHHHHHHhC
Confidence            44567899999999999999999999999999999999988777665443 567899999999999888 5553      


Q ss_pred             CCcEEEEc-CCCCCCCC--------CCCCCCCCCcchhHHHHHHHHHhcC-----------CCCCeEEEEeccccccCCC
Q 019935          151 GVTHVICC-TGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP-----------SSLKRIVLVSSVGVTKFNE  210 (333)
Q Consensus       151 ~~d~vi~~-a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~-----------~~~~~~v~~SS~~~~~~~~  210 (333)
                      ++|+|||| |+......        ...+.....+++|+.+++++++++.           .+.++||++||..++.   
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  179 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE---  179 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS---
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC---
Confidence            68999999 54432111        0111123467889999999998652           2346999999999876   


Q ss_pred             CCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-ccccc
Q 019935          211 LPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVS  284 (333)
Q Consensus       211 ~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~  284 (333)
                       +......|+.+|.     .+.+...+...|+++++|+||.+ .++..............         ..... ..+++
T Consensus       180 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~---------~~~~~~~~~~~  248 (281)
T 3ppi_A          180 -GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTM-KTPIMESVGEEALAKFA---------ANIPFPKRLGT  248 (281)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTTCHHHHHHHH---------HTCCSSSSCBC
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcC-CchhhhcccHHHHHHHH---------hcCCCCCCCCC
Confidence             4555667777764     23344555667999999999955 44321111111111111         11122 56899


Q ss_pred             HHHHHHHHHHhccCcccCCcEEEecCCCCCC
Q 019935          285 RIVVAEACIQALDIEFTEGEIYEINSVEGEG  315 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~  315 (333)
                      ++|+|+++++++++....|+++++++|...+
T Consensus       249 pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          249 PDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            9999999999999866779999999986543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.93  E-value=1.5e-25  Score=195.83  Aligned_cols=212  Identities=16%  Similarity=0.128  Sum_probs=146.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ..++++|+||||||+|+||++++++|+++|++|++++|++++.+         .+.++.+|++|+++++ +++       
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~-~~~~~~~~~~   85 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVE-QAYKEIEETH   85 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHH-HHHHHHHHHT
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHH-HHHHHHHHHc
Confidence            44567889999999999999999999999999999999865432         3778999999998887 444       


Q ss_pred             cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||.....   ....+.....+++|+.+++++++++.     .+.++||++||..++.    +......|+.
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  161 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL----GSAGQANYAA  161 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC----CHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----CCCCcHHHHH
Confidence            3689999999976421   11233444577899999999998652     2668999999998764    3444556776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|..     +.+...+...|+++++|+||.+ .++............         +........+++++|+|+++++++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~---------~~~~~p~~~~~~p~dvA~~i~~l~  231 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFV-DTDMTKVLTDEQRAN---------IVSQVPLGRYARPEEIAATVRFLA  231 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSB-CC---------CHHH---------HHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcC-cCcchhhcCHHHHHH---------HHhcCCCCCCcCHHHHHHHHHHHh
Confidence            6542     2333444557999999999955 555422100000000         011123346899999999999999


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      .++.  ..|+.+.+++|.
T Consensus       232 s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          232 SDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             SGGGTTCCSCEEEESTTT
T ss_pred             CccccCCcCcEEEECCcc
Confidence            8754  458999999873

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=2.7e-26  Score=200.46  Aligned_cols=218  Identities=17%  Similarity=0.134  Sum_probs=132.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+....  ...++.++.+|++|+++++ ++++     
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   83 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAK-AMADRTLAE   83 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            4567899999999999999999999999999999999987766543322  1457889999999999887 5544     


Q ss_pred             --CCcEEEEcCCCCCC------CCCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          151 --GVTHVICCTGTTAF------PSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 --~~d~vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                        ++|+||||||....      .....+.....+++|+.+++++++++     +.+.++||++||..++.       ...
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------~~~  156 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-------YSN  156 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-------CCc
Confidence              89999999997421      01112223346789999988888755     23567999999998863       223


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++.......        ......+........+.+++|+|+++
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~~  227 (253)
T 3qiv_A          157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPI-DTEANRTTTP--------KEMVDDIVKGLPLSRMGTPDDLVGMC  227 (253)
T ss_dssp             ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCC-cccchhhcCc--------HHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            4554443     23334444556999999999955 6654321111        00111112233445677899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.++.  ..|++|++++|.
T Consensus       228 ~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          228 LFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEC----
T ss_pred             HHHcCccccCCCCCEEEECCCe
Confidence            99998754  359999999974

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.93  E-value=1e-25  Score=198.21  Aligned_cols=214  Identities=16%  Similarity=0.095  Sum_probs=148.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|+||||||+|+||+++++.|+++|++|++++|++++         ..++.++.+|++|+++++ ++++       +
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~g~   74 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVK-ASIDHIFKEYGS   74 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHH-HHHHHHHHHcCC
Confidence            4567899999999999999999999999999999998654         346788999999998887 5544       7


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++     +++.++||++||..++.    +......|+.+|
T Consensus        75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  150 (264)
T 2dtx_A           75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----ITKNASAYVTSK  150 (264)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc----CCCCchhHHHHH
Confidence            999999999754211   111223346788999999998865     23568999999998875    444556777665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh--cc----cceeecCCCCcccccccHHHHHHHH
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA--GE----RRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      ..     +.+...+... +++++|+||.+ .++..    ..+.....  ..    .....+....+...+++++|+|+++
T Consensus       151 ~a~~~~~~~la~e~~~~-i~vn~v~PG~v-~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  224 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPL-LRCNAVCPATI-DTPLV----RKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV  224 (264)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSB-CSHHH----HHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEEEeCCC-cCcch----hhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            42     2222333344 99999999955 44321    11100000  00    0000011112345689999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.  ..|+.+++++|.
T Consensus       225 ~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          225 AFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhcCCCCcEEEECCCc
Confidence            99998754  458999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.93  E-value=1.3e-25  Score=198.89  Aligned_cols=226  Identities=13%  Similarity=0.082  Sum_probs=155.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-------------cchhhhhhccC--CCCceEEEEccCCCcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-------------PEKATTLFGKQ--DEETLQVCKGDTRNPKD  143 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-------------~~~~~~~~~~~--~~~~~~~v~~D~~d~~~  143 (333)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+             .+..++.....  ...++.++.+|++|+++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4678999999999999999999999999999999983             33333322111  15678899999999988


Q ss_pred             Cchhhh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEecccccc
Q 019935          144 LDPAIF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTK  207 (333)
Q Consensus       144 ~~~~~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~  207 (333)
                      ++ +++       .++|+||||||......   ...+.....+++|+.+++++++++    + .+ .++||++||..++.
T Consensus        88 v~-~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           88 LR-KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HH-HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HH-HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            87 444       47999999999864221   112223346889999999999965    1 23 46999999998875


Q ss_pred             CCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccce-eecCCCCccc
Q 019935          208 FNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRA-VLMGQGDKLI  280 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~  280 (333)
                          +......|+.+|.     .+.+...+...|+++++|+||.+ .++...... ............. ..+....+. 
T Consensus       167 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-  240 (277)
T 3tsc_A          167 ----MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPV-NTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-  240 (277)
T ss_dssp             ----CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-SSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCC-cCCcccchhhhhhhhcccccHHHHHHhhhccCC-
Confidence                4455567776664     23444555667999999999955 655432111 1111111111111 111122222 


Q ss_pred             ccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          281 GEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       281 ~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .+.+++|+|++++++++++.  ..|+++++++|
T Consensus       241 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            58999999999999998765  45999999997

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.93  E-value=2.2e-25  Score=199.49  Aligned_cols=224  Identities=12%  Similarity=0.046  Sum_probs=155.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC------------cchhhhhhccC--CCCceEEEEccCCCcCCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~  144 (333)
                      ++++|++|||||+|+||+++++.|+++|++|++++|+            .++.++.....  .+.++.++.+|++|++++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5678999999999999999999999999999999987            33333222111  156789999999999988


Q ss_pred             chhhh-------cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEecccccc
Q 019935          145 DPAIF-------EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTK  207 (333)
Q Consensus       145 ~~~~~-------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~  207 (333)
                      + +++       .++|+||||||......    ...+.....+++|+.|++++++++     +. +.++||++||..++.
T Consensus       105 ~-~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          105 Q-AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             H-HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             H-HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            7 544       48999999999764221    111223446889999999999965     22 357999999998875


Q ss_pred             CCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc---cc------eeec
Q 019935          208 FNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE---RR------AVLM  273 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~---~~------~~~~  273 (333)
                          +......|+.+|.     .+.+...+...|+++++|+||.+ +++...... .. ......   ..      ....
T Consensus       184 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~  256 (299)
T 3t7c_A          184 ----GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSV-ATPMLLNEP-TY-RMFRPDLENPTVEDFQVASRQ  256 (299)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB-SSTTTSSHH-HH-HHHCTTSSSCCHHHHHHHHHH
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCc-cCccccccc-hh-hhhhhhhccchhhHHHHHhhh
Confidence                4455667776664     23444555667999999999955 666543211 00 000000   00      0001


Q ss_pred             CCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          274 GQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       274 ~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ..... ..+.+++|+|+++++++++..  ..|++++++||
T Consensus       257 ~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          257 MHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             HSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            11112 468899999999999998765  45999999997

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.93  E-value=3.5e-26  Score=201.62  Aligned_cols=217  Identities=15%  Similarity=0.097  Sum_probs=150.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ..+..+|+||||||+|+||++++++|+++|++|++++|+.+..        ...+..+.+|++|+++++ +++       
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~   79 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD--------VNVSDHFKIDVTNEEEVK-EAVEKTTKKY   79 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C--------TTSSEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc--------cCceeEEEecCCCHHHHH-HHHHHHHHHc
Confidence            3466789999999999999999999999999999999987554        225678899999999887 544       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  155 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA----ATKNAAAYVT  155 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----BCTTCHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----CCCCChhHHH
Confidence            38999999999864221   111122335679999999999965     23567999999999876    4555667776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc------ccceeecCCCCcccccccHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG------ERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      +|..     +.+...+.. ++++++|+||.+ +++...    ........      ......+........+.+++|+|+
T Consensus       156 sKaa~~~l~~~la~e~~~-~i~vn~v~PG~v-~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  229 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAP-KIRCNAVCPGTI-MTPMVI----KAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAE  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TEEEEEEEECSB-CCHHHH----HHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEEECCC-cCcchh----hhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            6642     222233333 899999999955 544311    11000000      000011122344567899999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++++++..  ..|+++++++|.
T Consensus       230 ~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          230 VVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCCccCCCcCcEEEECCCc
Confidence            9999998754  459999999974

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=2.7e-26  Score=202.62  Aligned_cols=227  Identities=14%  Similarity=0.107  Sum_probs=150.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      +++++|+||||||+|+||++++++|+++|++|++++| +.++.+.+....  .+.++.++.+|++|+++++ ++++    
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~   95 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV-ALFDKAVS   95 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHH
Confidence            3467789999999999999999999999999999999 665544332211  1456889999999998887 5554    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccc-cCCCCCccchhhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVT-KFNELPWSIMNLF  219 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~-~~~~~~~~~~~~~  219 (333)
                         ++|+||||||......   ...+.....+++|+.++.++++++.    .+ ++||++||..++ .    +......|
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~----~~~~~~~Y  170 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMT----GIPNHALY  170 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCC----SCCSCHHH
T ss_pred             HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccC----CCCCCchH
Confidence               8999999999754211   1111223467889999999988652    23 799999999887 4    23344567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHH---hhc-ccceeecCCCCcccccccHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA---TAG-ERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      +.+|..     +.....+...|+++++++||.+ +++........+...   ... ......+.......++++++|+|+
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  249 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGV-KTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-SSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc-cccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHH
Confidence            655532     1122233346999999999955 443211000000000   000 000001122334567999999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.++.  ..|++|++++|
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCcccccccCcEEEecCC
Confidence            9999998754  35899999986

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=9e-26  Score=198.38  Aligned_cols=218  Identities=16%  Similarity=0.121  Sum_probs=154.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.++..+.. ..++.++.+|++|+++++ +++       .+
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~   80 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADVSDPKAVE-AVFAEALEEFGR   80 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCTTSHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            456789999999999999999999999999999999988776655443 357889999999998887 444       36


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++.. .  .++||++||..+++     ......|+.+|. 
T Consensus        81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~Y~asK~a  155 (263)
T 2a4k_A           81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-----AFGLAHYAAGKLG  155 (263)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-----HHHHHHHHHCSSH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-----CCCcHHHHHHHHH
Confidence            899999999764211   01111234678999999999997622 1  46999999998862     233455654442 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          225 ----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       225 ----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                          .+.+...+...|+++++|+||.+ +++..............         ...+...+++++|+|++++++++++.
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~---------~~~p~~~~~~p~dvA~~v~~l~s~~~  225 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLI-QTPMTAGLPPWAWEQEV---------GASPLGRAGRPEEVAQAALFLLSEES  225 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSB-CCGGGTTSCHHHHHHHH---------HTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcC-cCchhhhcCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCccc
Confidence                33444555667999999999955 66543211111111111         01223468899999999999998754


Q ss_pred             --cCCcEEEecCCCC
Q 019935          301 --TEGEIYEINSVEG  313 (333)
Q Consensus       301 --~~g~~~~v~~g~~  313 (333)
                        ..|+.+++++|..
T Consensus       226 ~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          226 AYITGQALYVDGGRS  240 (263)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCCcCCEEEECCCcc
Confidence              4589999999753

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.93  E-value=9.8e-26  Score=201.52  Aligned_cols=223  Identities=14%  Similarity=0.044  Sum_probs=158.1

Q ss_pred             CCCCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|  +||++++++|+++|++|++++|+.+..+.+..... ..++.++.+|++|+++++ +++    
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVD-NMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHH-HHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHH-HHHHHHH
Confidence            4567789999999997  99999999999999999999998754333221110 234688999999999887 544    


Q ss_pred             ---cCCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          150 ---EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                         .++|+||||||....     +  ....+.....+++|+.+++++++++..   ..++||++||.+++.    +....
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~----~~~~~  179 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK----VVPHY  179 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----CCTTT
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc----CCCCc
Confidence               478999999998631     1  112223344678899999999997632   235999999998875    44555


Q ss_pred             hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|.     .+.+...+...|+++++|+||.+ +++.......  .+.....         .......+.+++|+|
T Consensus       180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA  249 (296)
T 3k31_A          180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPV-RTLASSGISDFHYILTWNK---------YNSPLRRNTTLDDVG  249 (296)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-CCSSCCSCHHHHHHHHHHH---------HHSTTSSCCCHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCC-cCchhhcccchHHHHHHHH---------hcCCCCCCCCHHHHH
Confidence            66776664     23444556667999999999954 6665432211  1111111         112345678999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVEGE  314 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~~~  314 (333)
                      +++++++++..  ..|+++++++|...
T Consensus       250 ~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          250 GAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHcCCccCCccCCEEEECCCccc
Confidence            99999998754  45999999998543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.93  E-value=9e-26  Score=199.75  Aligned_cols=221  Identities=12%  Similarity=0.067  Sum_probs=157.5

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....  .+.++.++.+|++|+++++ ++++    
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~-~~~~~~~~  105 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVR-GMLDQMTG  105 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHH
Confidence            34677899999999999999999999999999999999987766543322  1457889999999999888 5544    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCCCCCccchhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         ++|+||||||......   ...+..+..+++|+.+++++++++.     ++ .++||++||...+...  .......
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~--~~~~~~~  183 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN--IPQQVSH  183 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--CSSCCHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC--CCCCcch
Confidence               8999999999864321   1112223356799999999999662     23 3789999998876421  1123456


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|.     .+.+...+...|+++++|+||.+ +++..... ..+...         +....+...+.+++|+|++++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v-~T~~~~~~-~~~~~~---------~~~~~p~~r~~~pedvA~~v~  252 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYI-RTELVEPL-ADYHAL---------WEPKIPLGRMGRPEELTGLYL  252 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CSTTTGGG-GGGHHH---------HGGGSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCC-cCCccccc-hHHHHH---------HHhcCCCCCCcCHHHHHHHHH
Confidence            776664     23344455667999999999955 66654321 111111         111234456889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++..  ..|++++++||
T Consensus       253 fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHcCccccCccCcEEEECcC
Confidence            9998754  45999999997

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-25  Score=199.30  Aligned_cols=220  Identities=13%  Similarity=0.074  Sum_probs=152.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ...+++|+||||||+|+||+++++.|+++|++|++++|++++.+.+....  .+.++.++.+|++|+++++ +++     
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~-~~~~~~~~  117 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEIS-EVINKILT  117 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHH-HHHHHHHH
Confidence            34567789999999999999999999999999999999876655433211  1456889999999998887 554     


Q ss_pred             --cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......|
T Consensus       118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  193 (285)
T 2c07_A          118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----GNVGQANY  193 (285)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc----CCCCCchH
Confidence              47999999999764211   111222346788999988888865     23678999999997764    23344567


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++........+.....         .......+++++|+|+++++
T Consensus       194 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dvA~~~~~  263 (285)
T 2c07_A          194 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFI-SSDMTDKISEQIKKNII---------SNIPAGRMGTPEEVANLACF  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CC-----CCHHHHHHHH---------TTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcE-ecCchhhcCHHHHHHHH---------hhCCCCCCCCHHHHHHHHHH
Confidence            766542     2233344556999999999955 66543321121211111         11223458999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.++.  ..|+.+++++|
T Consensus       264 l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          264 LSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCCCcCCCCCCEEEeCCC
Confidence            998754  35899999986

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.93  E-value=3.1e-25  Score=192.17  Aligned_cols=210  Identities=14%  Similarity=0.149  Sum_probs=147.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~~d~  154 (333)
                      +|++|||||+|+||++++++|+++|++|++++|++++..+..      ++.++.+|++| ++++ ++       +.++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~D~~~-~~~~-~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL------GAVPLPTDLEK-DDPK-GLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH------TCEEEECCTTT-SCHH-HHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh------CcEEEecCCch-HHHH-HHHHHHHHHcCCCCE
Confidence            579999999999999999999999999999999976632211      37889999999 8776 43       348999


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH--
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~--  224 (333)
                      ||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++....  ..+...|+.+|.  
T Consensus        74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--PVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--TSCCHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--CCCCccHHHHHHHH
Confidence            999999754211   111223346788999999999866     23678999999998876321  144556776654  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 ---KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 ---k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                         .+.+...+...|+++++|+||.+ +++......  +.+....         ....+...+++++|+|+++++++.++
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~---------~~~~p~~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYV-ETEFTLPLRQNPELYEPI---------TARIPMGRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSB-CSGGGHHHHTCHHHHHHH---------HTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCc-cCchhhccccCHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCch
Confidence               23344455667999999999955 554321100  0111111         11123346899999999999999875


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+.+++++|
T Consensus       222 ~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          222 AEYLTGQAVAVDGG  235 (239)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hcCCCCCEEEECCC
Confidence            4  45899999986

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.93  E-value=1.5e-25  Score=197.63  Aligned_cols=220  Identities=15%  Similarity=0.094  Sum_probs=153.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-Ccchhhhhhcc--CCCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGK--QDEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~--~~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .+.+|++|||||+|+||++++++|+++|++|++++| +.+..+.....  ....++.++.+|++|+++++ ++++     
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~  100 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCE-RCAEKVLAD  100 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHH
Confidence            456789999999999999999999999999999984 44433332211  11567899999999998887 5443     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......|+
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  176 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR----GAFGQANYA  176 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTBHHHH
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc----CCCCcchHH
Confidence              8999999999864211   111223346788999999999865     13567999999998875    445566787


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++..........        ...+........+.+++|+|++++++
T Consensus       177 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~--------~~~~~~~~~~~~~~~p~dvA~~v~~L  247 (269)
T 3gk3_A          177 SAKAGIHGFTKTLALETAKRGITVNTVSPGYL-ATAMVEAVPQDVL--------EAKILPQIPVGRLGRPDEVAALIAFL  247 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTTTC---------------CCSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc-cchhhhhhchhHH--------HHHhhhcCCcCCccCHHHHHHHHHHH
Confidence            7664     23334445567999999999955 5554332111100        00112233445788999999999999


Q ss_pred             ccCcc--cCCcEEEecCCC
Q 019935          296 LDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.  ..|+++++++|.
T Consensus       248 ~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          248 CSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             TSTTCTTCCSCEEEESTTS
T ss_pred             hCCCcCCeeCcEEEECCCE
Confidence            98764  459999999974

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=2.1e-25  Score=201.22  Aligned_cols=226  Identities=13%  Similarity=0.050  Sum_probs=154.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC------------cchhhhhhccC--CCCceEEEEccCCCcC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPK  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~D~~d~~  142 (333)
                      +.++.+|++|||||+|+||+++++.|+++|++|++++|+            .++.+......  .+.++.++.+|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            556788999999999999999999999999999999886            22222221111  1567899999999999


Q ss_pred             CCchhhh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccc
Q 019935          143 DLDPAIF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVT  206 (333)
Q Consensus       143 ~~~~~~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~  206 (333)
                      +++ +++       .++|+||||||......   ...+.....+++|+.+++++++++     +.+ .++||++||..++
T Consensus       121 ~v~-~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQ-AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHH-HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHH-HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            887 554       38999999999864211   112223346789999999999966     222 4689999999887


Q ss_pred             cCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc---------cceee
Q 019935          207 KFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE---------RRAVL  272 (333)
Q Consensus       207 ~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~---------~~~~~  272 (333)
                      .    +......|+.+|.     .+.+...+...|+++++|+||.+ +++....  ..+.......         .....
T Consensus       200 ~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  272 (317)
T 3oec_A          200 R----GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAV-NTEMALN--EKLLKMFLPHLENPTREDAAELFS  272 (317)
T ss_dssp             S----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-SSHHHHC--HHHHHHHCTTCSSCCHHHHHHHHT
T ss_pred             C----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc-cCccccc--hhhhhhhhhhccccchhHHHHHHh
Confidence            5    4455667776664     23444555667999999999955 5543110  0011111000         00000


Q ss_pred             cCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          273 MGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       273 ~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ...... ..|++++|+|+++++++++..  ..|++++++||
T Consensus       273 ~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          273 QLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             TTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            111112 678999999999999998754  45999999997

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=4.1e-25  Score=192.63  Aligned_cols=212  Identities=17%  Similarity=0.103  Sum_probs=146.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCc
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVT  153 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d  153 (333)
                      ..++.+|+||||||+|+||++++++|+++|++|++++|+++..+.+      ..+.++ +|+  .++++ ++++   ++|
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~-~D~--~~~~~-~~~~~~~~iD   83 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVV-CDL--RKDLD-LLFEKVKEVD   83 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEE-CCT--TTCHH-HHHHHSCCCS
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh------CCeEEE-eeH--HHHHH-HHHHHhcCCC
Confidence            4466789999999999999999999999999999999997544332      256667 999  45555 4443   899


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|..
T Consensus        84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~a  159 (249)
T 1o5i_A           84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----PIENLYTSNSARMA  159 (249)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC----CCCCCchHHHHHHH
Confidence            9999999754211   111222346788999988887754     23678999999999876    44455667766542


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHH-HhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK-ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           +.+...+...|+++++|+||.+ +++........... .         +........+++++|+|+++++++.++
T Consensus       160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~---------~~~~~p~~~~~~~~dvA~~i~~l~s~~  229 (249)
T 1o5i_A          160 LTGFLKTLSFEVAPYGITVNCVAPGWT-ETERVKELLSEEKKKQ---------VESQIPMRRMAKPEEIASVVAFLCSEK  229 (249)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTHHHHSCHHHHHH---------HHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCC-ccCcccccchhhHHHH---------HHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence                 3333445567999999999955 66542110011111 1         111223456899999999999999875


Q ss_pred             c--cCCcEEEecCCC
Q 019935          300 F--TEGEIYEINSVE  312 (333)
Q Consensus       300 ~--~~g~~~~v~~g~  312 (333)
                      .  ..|+.+++++|.
T Consensus       230 ~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          230 ASYLTGQTIVVDGGL  244 (249)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             ccCCCCCEEEECCCc
Confidence            4  348999999974

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=1.5e-25  Score=196.59  Aligned_cols=219  Identities=14%  Similarity=0.097  Sum_probs=152.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++| +.++.+.+....  ...++.++.+|++|+++++ ++++     
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   82 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVI-NLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHH-HHHHHHHHH
Confidence            356789999999999999999999999999999999 765554432211  1456888999999998887 5554     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhh
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        ++|+||||||......   ...+.....+++|+.++.++++++     +.+ .++||++||...+.    +..+...|
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  158 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----PWPLFVHY  158 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----CCCCccHH
Confidence              8999999999764211   111222346788999999988865     224 67999999998765    44556677


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++......  +.+....         ........+++++|+|+++
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva~~~  228 (261)
T 1gee_A          159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAI-NTPINAEKFADPEQRADV---------ESMIPMGYIGEPEEIAAVA  228 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSGGGHHHHHSHHHHHHH---------HTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCc-CCchhhhcccChhHHHHH---------HhcCCCCCCcCHHHHHHHH
Confidence            766632     2223344556999999999955 665432110  1111111         1112334689999999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.++.  ..|+++++++|.
T Consensus       229 ~~l~~~~~~~~~G~~~~v~gg~  250 (261)
T 1gee_A          229 AWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCccccCCCCcEEEEcCCc
Confidence            99998643  458999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=1.4e-25  Score=198.08  Aligned_cols=220  Identities=17%  Similarity=0.064  Sum_probs=153.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      .+++++|+||||||+|+||++++++|+++|++|++++|+. +..+.+....  ...++.++.+|++|+++++ ++++   
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~  102 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFI-EAIQTIV  102 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH-HHHHHHH
Confidence            3456789999999999999999999999999999999954 3333322111  1457899999999998887 5543   


Q ss_pred             ----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          151 ----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                          ++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......
T Consensus       103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  178 (271)
T 4iin_A          103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER----GNMGQTN  178 (271)
T ss_dssp             HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHH
T ss_pred             HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC----CCCCchH
Confidence                8999999999864221   111223346788999999999865     22568999999998865    4455667


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ .++........         ....+........+.+++|+|++++
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~---------~~~~~~~~~~~~~~~~p~dvA~~i~  248 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFI-ETDMNANLKDE---------LKADYVKNIPLNRLGSAKEVAEAVA  248 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB-CCC---------------------CGGGCTTCSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcc-cCCchhhhcHH---------HHHHHHhcCCcCCCcCHHHHHHHHH
Confidence            7766642     2333444557999999999955 55543211111         1111222334567899999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++.  ..|++++++||
T Consensus       249 ~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          249 FLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCCCcCCCcCCEEEeCCC
Confidence            9998754  45999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=1e-25  Score=197.61  Aligned_cols=220  Identities=14%  Similarity=0.038  Sum_probs=145.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++ |+.+..+...+..  .+.++.++.+|++|+++++ ++++    
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~   82 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVE-AAISAAAD   82 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999984 4544433322111  1557889999999999887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccc-cCCCCCccchhhh
Q 019935          151 ---GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVT-KFNELPWSIMNLF  219 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~-~~~~~~~~~~~~~  219 (333)
                         ++|+||||||......    ...+.....+++|+.|++++++++.. .  .++||++||..++ .    +......|
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~~Y  158 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----GGPGALAY  158 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----CSTTCHHH
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----CCCCcHHH
Confidence               8999999999752111    11111234678999999999997633 2  3489999999886 3    33445667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+... +++++|+||.+ .++.......        ......+....+...+.+++|+|+++++
T Consensus       159 ~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v-~T~~~~~~~~--------~~~~~~~~~~~p~~r~~~pedva~~v~~  228 (259)
T 3edm_A          159 ATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMI-STTFHDTFTK--------PEVRERVAGATSLKREGSSEDVAGLVAF  228 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCB-CC------------------------------CCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCC-cCcccccccC--------hHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            766642     2222333333 99999999955 5554321110        1111112233455678899999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++..  ..|++|+++||.
T Consensus       229 L~s~~~~~itG~~i~vdGg~  248 (259)
T 3edm_A          229 LASDDAAYVTGACYDINGGV  248 (259)
T ss_dssp             HHSGGGTTCCSCEEEESBCS
T ss_pred             HcCccccCccCCEEEECCCc
Confidence            998764  359999999974

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.92  E-value=2e-25  Score=196.65  Aligned_cols=219  Identities=16%  Similarity=0.113  Sum_probs=154.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      +..+++|+||||||+|+||++++++|+++|++|+++. |+.+..+......  ...++.++.+|++|+++++ ++++   
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~   99 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCR-EVLEHEI   99 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHH
Confidence            3456778999999999999999999999999997765 5554444332211  1567899999999999887 5543   


Q ss_pred             ----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc------CCCCCeEEEEeccccccCCCCCccchh
Q 019935          151 ----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~------~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                          ++|+||||||......   ...+.....+++|+.++.++++++      +.+.++||++||..++.    +.....
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  175 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM----GNRGQV  175 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH----CCTTCH
T ss_pred             HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc----CCCCCc
Confidence                8999999999864211   112223346788999999999865      34667999999988765    444556


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+...+...|+++++|+||.+ +++..... ........         .......+.+++|+|+++
T Consensus       176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~-~~~~~~~~---------~~~p~~~~~~~edva~~~  244 (267)
T 4iiu_A          176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLI-DTGMIEME-ESALKEAM---------SMIPMKRMGQAEEVAGLA  244 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSTTCCCC-HHHHHHHH---------HTCTTCSCBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeee-cCCccccc-HHHHHHHH---------hcCCCCCCcCHHHHHHHH
Confidence            7776664     23344455667999999999955 66654432 22211111         112344688999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.++.  ..|++++++||
T Consensus       245 ~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          245 SYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCCcccCccCCEEEeCCC
Confidence            99998754  55999999986

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=1.5e-25  Score=197.48  Aligned_cols=224  Identities=13%  Similarity=0.079  Sum_probs=155.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh---cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF---EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~---~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.++..+..    ....+.++.+|++|+++++ +++   .+
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~g~   85 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQ-DVIEKYPK   85 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHH-HHHHHCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHH-HHHHhcCC
Confidence            567899999999999999999999999999999999987665443221    1346788999999998887 554   48


Q ss_pred             CcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.......   ..+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  161 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM----PSQEMAHYSATK  161 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS----CCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc----CCCcchHHHHHH
Confidence            9999999998642211   11122235789999999988855     23567999999998875    455566777666


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccc----------ceeecCCCCcccccccHHHH
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER----------RAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ..     +.+...+...|+++++|+||.+ .++.    ...+........          .............+++++|+
T Consensus       162 aa~~~l~~~la~e~~~~gi~vn~v~PG~v-~t~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedv  236 (267)
T 3t4x_A          162 TMQLSLSRSLAELTTGTNVTVNTIMPGST-LTEG----VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEI  236 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEEEECCB-CCHH----HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHH
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCee-cCcc----HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHH
Confidence            42     2333444556899999999955 4432    111111110000          00001112245679999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+++++++++..  ..|++++++||.
T Consensus       237 A~~v~fL~s~~~~~itG~~i~vdGG~  262 (267)
T 3t4x_A          237 AHLVTFLSSPLSSAINGSALRIDGGL  262 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHcCccccCccCCeEEECCCc
Confidence            999999998754  459999999974

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.92  E-value=1.5e-25  Score=197.20  Aligned_cols=217  Identities=17%  Similarity=0.121  Sum_probs=151.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      +.++++|+||||||+|+||++++++|+++|++|++++|+.+....         ...+.+|++|.++++ +++       
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---------~~~~~~Dv~~~~~~~-~~~~~~~~~~   92 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA---------DLHLPGDLREAAYAD-GLPGAVAAGL   92 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC---------SEECCCCTTSHHHHH-HHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh---------hhccCcCCCCHHHHH-HHHHHHHHhc
Confidence            556788999999999999999999999999999999998655432         134578999988776 433       


Q ss_pred             cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||..++.    +......|+.
T Consensus        93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  168 (266)
T 3uxy_A           93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR----PGPGHALYCL  168 (266)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB----CCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----CCCCChHHHH
Confidence            48999999999864211   112223346779999999999976    2 3678999999998875    4556667776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh-c-ccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA-G-ERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+...|+++++|+||.+ +++..    ........ . ......+....+...+.+++|+|+++++
T Consensus       169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~----~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  243 (266)
T 3uxy_A          169 TKAALASLTQCMGMDHAPQGIRINAVCPNEV-NTPML----RTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLF  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CCHHH----HHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCC-cchHh----hhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            6642     3334455567999999999955 54421    11111000 0 0000112234455678999999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++.  ..|++++++||.
T Consensus       244 L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          244 LASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCchhcCCcCCEEEECcCE
Confidence            998765  449999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.92  E-value=7.1e-26  Score=200.27  Aligned_cols=223  Identities=13%  Similarity=0.087  Sum_probs=156.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ ++++     
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~-~~~~~~~~~  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGT-DLIERAEAI  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHH-HHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHH-HHHHHHHHh
Confidence            3567899999999999999999999999999999999887665543222  1567899999999999887 5554     


Q ss_pred             -CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       ++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||...+.    +......|+.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~a  183 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR----PKSVVTAYAA  183 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----CCCCchhhHH
Confidence             7999999999754211   111222346789999999999976    2 3567999999998876    4445556776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +|.     .+.+...+...|+++++|+||.+ .++...    ....... ...............+.+++|+|+++++++
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~----~~~~~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  257 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLV-DTDRNA----DRRAQDP-EGWDEYVRTLNWMGRAGRPEEMVGAALFLA  257 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CSHHHH----HHHHHCH-HHHHHHHHHHSTTCSCBCGGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccc-cCcccc----cccccCh-HHHHHHHhhcCccCCCcCHHHHHHHHHHHc
Confidence            664     23444555667999999999955 443211    1000000 000000000013346788999999999999


Q ss_pred             cCcc--cCCcEEEecCC
Q 019935          297 DIEF--TEGEIYEINSV  311 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g  311 (333)
                      ++..  ..|++++++||
T Consensus       258 s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          258 SEACSFMTGETIFLTGG  274 (275)
T ss_dssp             SGGGTTCCSCEEEESSC
T ss_pred             CcccCCCCCCEEEeCCC
Confidence            8754  45999999986

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=5.2e-25  Score=190.79  Aligned_cols=207  Identities=16%  Similarity=0.126  Sum_probs=148.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------CCcEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------GVTHV  155 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------~~d~v  155 (333)
                      +|+||||||+|+||++++++|+++|++|++++|+.+ .         .++.++.+|++|+++++ ++++      ++|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVR-RAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHH-HHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHH-HHHHHHHhhCCceEE
Confidence            579999999999999999999999999999999865 1         23578999999999888 6665      89999


Q ss_pred             EEcCCCCCCCCCC-C--C----CCCCCcchhHHHHHHHHHhcC----C-C------CCeEEEEeccccccCCCCCccchh
Q 019935          156 ICCTGTTAFPSRR-W--D----GDNTPEKVDWEGVRNLVSALP----S-S------LKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       156 i~~a~~~~~~~~~-~--~----~~~~~~~~n~~~~~~l~~a~~----~-~------~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                      |||||........ .  +    .....+++|+.++.++++++.    . +      .++||++||..++.    +..+..
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~  146 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE----GQIGQA  146 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----CCTTCH
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc----CCCCCc
Confidence            9999976422111 0  1    223456789999999998662    1 2      13999999998876    334556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc-cccccHHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL-IGEVSRIVVAEA  291 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a  291 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ +++........+......         .... ..+++++|+|++
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~  216 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAA---------QVPFPPRLGRPEEYAAL  216 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSC-SSHHHHTSCHHHHHHHHT---------TCCSSCSCCCHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccC-cchhhhccchhHHHHHHh---------hCCCcccCCCHHHHHHH
Confidence            67766632     2233344556999999999955 665422111221111111         1122 468899999999


Q ss_pred             HHHhccCcccCCcEEEecCCCC
Q 019935          292 CIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       292 ~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      ++++++++...|+.|++++|..
T Consensus       217 ~~~l~~~~~~~G~~~~v~gG~~  238 (242)
T 1uay_A          217 VLHILENPMLNGEVVRLDGALR  238 (242)
T ss_dssp             HHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHhcCCCCCCcEEEEcCCee
Confidence            9999988556699999999754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=5.6e-26  Score=192.25  Aligned_cols=188  Identities=14%  Similarity=0.096  Sum_probs=138.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~vi~~a  159 (333)
                      |+||||||+|+||++++++|+++  +|++++|++++.+.+......   +++.+|++|+++++ ++++   ++|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~-~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAK-ALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHH-HHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHH-HHHHhcCCCCEEEECC
Confidence            57999999999999999999999  999999998776655432211   78899999999988 7776   899999999


Q ss_pred             CCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHH-----HHHHH
Q 019935          160 GTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----KMGED  230 (333)
Q Consensus       160 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-----~~~e~  230 (333)
                      |.....   ....+.....+++|+.++.+++++++. +.++||++||..++.    +..+...|+.+|..     +....
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~a~~~~~~~~~~  150 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV----QVPGFAAYAAAKGALEAYLEAARK  150 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH----SSTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc----CCCCcchHHHHHHHHHHHHHHHHH
Confidence            975421   112223344678999999999998854 678999999999876    44556677766542     12223


Q ss_pred             HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          231 FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       231 ~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .+...|++++++|||.+ +++..                   .+.+....++++++|+|++++++++++.
T Consensus       151 ~~~~~gi~v~~v~pg~v-~t~~~-------------------~~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          151 ELLREGVHLVLVRLPAV-ATGLW-------------------APLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHTTTCEEEEECCCCB-CSGGG-------------------GGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHhhhCCEEEEEecCcc-cCCCc-------------------cccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            33447999999999965 54431                   0122344789999999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=7.8e-26  Score=197.91  Aligned_cols=220  Identities=13%  Similarity=0.091  Sum_probs=152.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      ....+|+||||||+|+||++++++|+++|++|++++ |+.++........  ...++.++.+|++|.++++ ++++    
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~   87 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTK-QAFDKVKA   87 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHH-HHHHHHHH
Confidence            345678999999999999999999999999999988 5554433322111  1457889999999998887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         ++|+||||||......   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  163 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----GQFGQTNY  163 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG----SCSCCHHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc----CCCCCccc
Confidence               7899999999864211   111223346788999999998865     23668999999998876    45556678


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++......+.+.....         .......+.+++|+|+++++
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~  233 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYI-GTDMVKAIRPDVLEKIV---------ATIPVRRLGSPDEIGSIVAW  233 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTSCHHHHHHHH---------HHSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcc-cCccccccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence            776642     3334455567999999999955 54432211122221111         11234568899999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++..+.  ..|+++++++|.
T Consensus       234 l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          234 LASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTS
T ss_pred             HhCCcccCCcCcEEEECCCE
Confidence            998654  459999999973

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=4.7e-25  Score=193.57  Aligned_cols=216  Identities=16%  Similarity=0.119  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhhc---
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ++++|++|||||+  |+||++++++|+++|++|++++|+.+   ..+++...  ..++.++.+|++|+++++ ++++   
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~-~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--LGGALLFRADVTQDEELD-ALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHH--TTCCEEEECCTTCHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEECCCCCHHHHH-HHHHHHH
Confidence            3567899999999  99999999999999999999999875   22222221  124788999999998887 5544   


Q ss_pred             ----CCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCCC---CCeEEEEeccccccCCCCCccch
Q 019935          151 ----GVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                          ++|+||||||....     +  ....+.....+++|+.+++++++++...   .++||++||.+++.    +....
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  157 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----VVPKY  157 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----BCTTC
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC----CCCCc
Confidence                78999999997531     1  1112223446789999999999977431   25999999988765    33445


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++.....  ...+......         ..+...+.+++|+|
T Consensus       158 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dva  227 (261)
T 2wyu_A          158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPV-RTVAARSIPGFTKMYDRVAQ---------TAPLRRNITQEEVG  227 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-CCTGGGGCTTHHHHHHHHHH---------HSTTSSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCC-cCchhhhccccHHHHHHHHh---------cCCCCCCCCHHHHH
Confidence            567766542     2333445566999999999955 66643211  1111111111         12234678999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++.+.  ..|+++++++|
T Consensus       228 ~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          228 NLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHcChhhcCCCCCEEEECCC
Confidence            99999998654  34899999997

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.92  E-value=1.3e-25  Score=198.25  Aligned_cols=217  Identities=16%  Similarity=0.135  Sum_probs=143.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +..+.+|++|||||+|+||++++++|+++|++|++++|+.++.++..... ..++.++.+|++|+++++ ++++      
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~  100 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-GDDALCVPTDVTDPDSVR-ALFTATVEKF  100 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEEEECCTTSHHHHH-HHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEecCCCHHHHH-HHHHHHHHHc
Confidence            44567889999999999999999999999999999999988776655443 467899999999999887 5544      


Q ss_pred             -CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CCC--CCeEEEEeccccccCCCCCccchhh
Q 019935          151 -GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSS--LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~--~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                       ++|+||||||......    ...+.....+++|+.|++++++++     +.+  .++||++||..++.    +......
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~  176 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----PRPYSAP  176 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS----CCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC----CCCCchH
Confidence             8999999999853211    112222447889999999999865     122  46999999998875    4455667


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|.     .+.+...+...|+++++|+||.+ .++.........       ..   .........+++++|+|++++
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~-------~~---~~~~~~~~~~~~pedvA~~v~  245 (272)
T 4dyv_A          177 YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNA-DTPMAQKMKAGV-------PQ---ADLSIKVEPVMDVAHVASAVV  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEC-C----------------------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcc-cChhhhhhcccc-------hh---hhhcccccCCCCHHHHHHHHH
Confidence            776664     23344455667999999999954 555422111000       00   001123346889999999999


Q ss_pred             HhccCcccC-CcEEEecC
Q 019935          294 QALDIEFTE-GEIYEINS  310 (333)
Q Consensus       294 ~~l~~~~~~-g~~~~v~~  310 (333)
                      ++++++... ...+.+..
T Consensus       246 fL~s~~~~~~~~~i~i~~  263 (272)
T 4dyv_A          246 YMASLPLDANVQFMTIMA  263 (272)
T ss_dssp             HHHHSCTTSCCCEEEEEE
T ss_pred             HHhCCCCcCccceEEEec
Confidence            999986532 33444443

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.92  E-value=5.5e-26  Score=200.14  Aligned_cols=219  Identities=15%  Similarity=0.137  Sum_probs=147.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc-CcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ..++|++|||||+|+||++++++|+++|++|+++++ +.+..+.+....  .+.++.++.+|++|+++++ +++      
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~  102 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVR-RLFATAEEA  102 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            456789999999999999999999999999999854 444444332211  1457889999999999887 544      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-C--CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S--SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                       .++|+||||||......   ...+.....+++|+.|++++++++. .  ..++||++||..++.    +......|+.+
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  178 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL----LHPSYGIYAAA  178 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH----CCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc----CCCCchHHHHH
Confidence             38999999999864221   1111123456799999999998662 2  235999999998765    34445667766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+...|+++++|+||.+ .++.......        ......+....+...+.+++|+|++++++++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~--------~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s  249 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPT-ATDLFLEGKS--------DEVRDRFAKLAPLERLGTPQDIAGAVAFLAG  249 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCB-C-------------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCC-cCccccccCC--------HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            642     3333444557999999999955 5443211000        0001112223445678999999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ...  ..|++++++||
T Consensus       250 ~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          250 PDGAWVNGQVLRANGG  265 (267)
T ss_dssp             TTTTTCCSEEEEESSS
T ss_pred             ccccCccCCEEEeCCC
Confidence            754  45999999986

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.92  E-value=1.5e-25  Score=194.83  Aligned_cols=217  Identities=16%  Similarity=0.082  Sum_probs=151.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-----CCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----~~d~  154 (333)
                      ++|++|||||+|+||++++++|++ .|++|++++|+.+..        ...+.++.+|++|+++++ ++++     ++|+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~id~   73 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDIT-NVLDIIKNVSFDG   73 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHH-HHHHHTTTCCEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHH-HHHHHHHhCCCCE
Confidence            467999999999999999999999 789999999876421        346788999999999888 5554     7899


Q ss_pred             EEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccchhhhHHHHH----
Q 019935          155 VICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (333)
Q Consensus       155 vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~----  224 (333)
                      ||||||.....   ....+.....+++|+.+++++++++.. .  .++||++||..++.    +......|+.+|.    
T Consensus        74 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~asKaa~~~  149 (244)
T 4e4y_A           74 IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI----AKPNSFAYTLSKGAIAQ  149 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC----CCTTBHHHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc----CCCCCchhHHHHHHHHH
Confidence            99999986421   111222334678999999999997743 2  25899999998875    4555667776664    


Q ss_pred             -HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc--ccceeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          225 -KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG--ERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       225 -k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                       .+.+...+...|+++++|+||.+ +++...............  ......+....+...+.+++|+|++++++++++. 
T Consensus       150 ~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  228 (244)
T 4e4y_A          150 MTKSLALDLAKYQIRVNTVCPGTV-DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSK  228 (244)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEESCB-CCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHcCeEEEEEecCcc-CchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccc
Confidence             23344555677999999999955 544321111111000000  0000112233445678999999999999998755 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|++++++||
T Consensus       229 ~itG~~i~vdGG  240 (244)
T 4e4y_A          229 FMTGGLIPIDGG  240 (244)
T ss_dssp             TCCSCEEEESTT
T ss_pred             cccCCeEeECCC
Confidence             45999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.92  E-value=6.2e-26  Score=199.32  Aligned_cols=227  Identities=14%  Similarity=0.070  Sum_probs=152.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.+....  .+.++.++.+|++|+++++ +++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   82 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVI-GTVDSVVRDF   82 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHH-HHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHH-HHHHHHHHHh
Confidence            356789999999999999999999999999999999987665443221  1456889999999998877 444       


Q ss_pred             cCCcEEEEcCCCC-CCC---CCCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 EGVTHVICCTGTT-AFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ~~~d~vi~~a~~~-~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      .++|+||||||.. ...   ....+.....+++|+.+++++++++.     ++.++||++||..++.    +......|+
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  158 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK----GPPNMAAYG  158 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS----CCTTBHHHH
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----CCCCCchHH
Confidence            3899999999975 211   01112223467889999999998652     2567999999998765    334455677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh----hc-ccc-e-eecCCCCcccccccHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT----AG-ERR-A-VLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~----~~-~~~-~-~~~~~~~~~~~~i~v~Dv  288 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++........+....    .. ... . ..+....+...+.+++|+
T Consensus       159 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  237 (262)
T 1zem_A          159 TSKGAIIALTETAALDLAPYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEI  237 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGS
T ss_pred             HHHHHHHHHHHHHHHHHHhhCeEEEEEecCCc-CcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHH
Confidence            6663     23344555677999999999955 4442110000000000    00 000 0 000011233468899999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+++++++++..  ..|+.+.++||
T Consensus       238 A~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          238 PGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999998754  45899999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.92  E-value=1.9e-25  Score=196.35  Aligned_cols=221  Identities=18%  Similarity=0.197  Sum_probs=151.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      .++|++|||||+|+||++++++|+++|++|++++|+.... +.+.+..  ...++.++.+|++|+++++ ++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLH-KIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHH-HHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHH-HHHHHHHHHh
Confidence            4568999999999999999999999999999998865432 2222111  1457899999999999888 5554      


Q ss_pred             -CCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          151 -GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       ++|+||||||......     ...+.....+++|+.+++++++++    + .+.++||++||.+.....  ++.....|
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~~~~Y  161 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP--GWIYRSAF  161 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC--CCTTCHHH
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC--CCCCCchh
Confidence             8999999999432111     111222346789999999999976    2 366899999998654221  34455677


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++............         +....+...+++++|+|+++++
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~---------~~~~~p~~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDI-IGEMKEATIQEARQL---------KEHNTPIGRSGTGEDIARTISF  231 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CGGGGSCCHHHHHHC-----------------CCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCc-cCccchhccHHHHHH---------HhhcCCCCCCcCHHHHHHHHHH
Confidence            766642     3333445567999999999955 666543323222111         1122344578899999999999


Q ss_pred             hccCcc--cCCcEEEecCCCC
Q 019935          295 ALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++.  ..|++++++||-.
T Consensus       232 l~s~~~~~itG~~i~vdGG~~  252 (264)
T 3i4f_A          232 LCEDDSDMITGTIIEVTGAVD  252 (264)
T ss_dssp             HHSGGGTTCCSCEEEESCSCC
T ss_pred             HcCcccCCCCCcEEEEcCcee
Confidence            998754  4599999999854

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.92  E-value=7.2e-25  Score=195.43  Aligned_cols=218  Identities=11%  Similarity=0.035  Sum_probs=153.0

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC---CCCceEEEEccCCCcC----------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ---DEETLQVCKGDTRNPK----------  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~----------  142 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++ |+.++.+.+....   .+.++.++.+|++|++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4456789999999999999999999999999999999 9887665443221   1457889999999998          


Q ss_pred             -------CCchhhh-------cCCcEEEEcCCCCCCCCC---C--------------CCCCCCCcchhHHHHHHHHHhc-
Q 019935          143 -------DLDPAIF-------EGVTHVICCTGTTAFPSR---R--------------WDGDNTPEKVDWEGVRNLVSAL-  190 (333)
Q Consensus       143 -------~~~~~~~-------~~~d~vi~~a~~~~~~~~---~--------------~~~~~~~~~~n~~~~~~l~~a~-  190 (333)
                             +++ +++       .++|+||||||.......   .              .+.....+++|+.+++++++++ 
T Consensus        84 ~~~~~~~~v~-~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           84 APVTLFTRCA-ELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCBCHHHHHH-HHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccchHHHHH-HHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                   666 444       389999999997642110   1              1112245788999999999865 


Q ss_pred             ----CCC------CCeEEEEeccccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCc
Q 019935          191 ----PSS------LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY  255 (333)
Q Consensus       191 ----~~~------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~  255 (333)
                          +.+      .++||++||..++.    +......|+.+|.     .+.+...+...|+++++|+||.+ ..+. . 
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~-~-  235 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS-VLVD-D-  235 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CCGG-G-
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcC----CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCc-cCCc-c-
Confidence                234      57999999998875    4455567776664     23444556677999999999955 5544 2 


Q ss_pred             chHHHHHHhhcccceeecCCCCccc-ccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          256 DLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ..+.+.....         ...+.. .+.+++|+|+++++++..+.  ..|+.+++++|
T Consensus       236 ~~~~~~~~~~---------~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          236 MPPAVWEGHR---------SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             SCHHHHHHHH---------TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHH---------hhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence            1111111111         112233 57899999999999998644  45899999987

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=5.4e-25  Score=194.23  Aligned_cols=218  Identities=15%  Similarity=0.162  Sum_probs=152.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+. +..+.+....  .+.++.++.+|++|+++++ ++++     
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~  106 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIE-QAIRETVEA  106 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHH
Confidence            56789999999999999999999999999999987654 3333332211  1567889999999999887 5544     


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-C--CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S--SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++. .  ..++||++||......   +......|+.+
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~---~~~~~~~Y~as  183 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV---PWPGISLYSAS  183 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC---CSTTCHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC---CCCCchHHHHH
Confidence              8999999999864211   1122234467889999999999762 1  3469999999765321   34455677766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+...|+++++|+||.+ .++........ .....         .......+.+++|+|+++++++.
T Consensus       184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v-~T~~~~~~~~~-~~~~~---------~~~~~~r~~~pedvA~~v~fL~s  252 (271)
T 3v2g_A          184 KAALAGLTKGLARDLGPRGITVNIVHPGST-DTDMNPADGDH-AEAQR---------ERIATGSYGEPQDIAGLVAWLAG  252 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSSSSCSSCSS-HHHHH---------HTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCCC-cCCcccccchh-HHHHH---------hcCCCCCCCCHHHHHHHHHHHhC
Confidence            642     3344555667999999999955 66653211110 01000         11233467899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ...  ..|++++++||
T Consensus       253 ~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          253 PQGKFVTGASLTIDGG  268 (271)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             cccCCccCCEEEeCcC
Confidence            654  45999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.92  E-value=7.9e-25  Score=198.33  Aligned_cols=218  Identities=11%  Similarity=0.039  Sum_probs=153.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccC---CCCceEEEEccCCCcC----------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ---DEETLQVCKGDTRNPK----------  142 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~----------  142 (333)
                      |.++++|++|||||+|+||+++++.|+++|++|++++ |+.++.+.+...+   .+.++.++.+|++|++          
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            3346778999999999999999999999999999999 9887665543321   1457889999999998          


Q ss_pred             -------CCchhhh-------cCCcEEEEcCCCCCCCCC---C--------------CCCCCCCcchhHHHHHHHHHhc-
Q 019935          143 -------DLDPAIF-------EGVTHVICCTGTTAFPSR---R--------------WDGDNTPEKVDWEGVRNLVSAL-  190 (333)
Q Consensus       143 -------~~~~~~~-------~~~d~vi~~a~~~~~~~~---~--------------~~~~~~~~~~n~~~~~~l~~a~-  190 (333)
                             +++ +++       .++|+||||||.......   .              .+.....+++|+.+++++++++ 
T Consensus       121 ~~~~~~~~v~-~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          121 APVTLFTRCA-ELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             CCBCHHHHHH-HHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccccHHHHH-HHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   666 444       389999999997642110   0              1111235788999999999865 


Q ss_pred             ----CCC------CCeEEEEeccccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCc
Q 019935          191 ----PSS------LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSY  255 (333)
Q Consensus       191 ----~~~------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~  255 (333)
                          +.+      .++||++||..++.    +......|+.+|.     .+.+...+...|+++++|+||.+ .++. ..
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v-~T~~-~~  273 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS-VLVD-DM  273 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-SCCC-CS
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhcc----CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc-cCCc-cc
Confidence                224      67999999998875    4445566776664     23344455667999999999955 6665 22


Q ss_pred             chHHHHHHhhcccceeecCCCCccc-ccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          256 DLNTLLKATAGERRAVLMGQGDKLI-GEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                       .+.......         ...... .+.+++|+|+++++++....  ..|+++++++|
T Consensus       274 -~~~~~~~~~---------~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          274 -PPAVWEGHR---------SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             -CHHHHHHHH---------TTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cHHHHHHHH---------hhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence             222221111         111223 57899999999999998643  45899999987

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.92  E-value=4.7e-26  Score=206.01  Aligned_cols=237  Identities=12%  Similarity=0.079  Sum_probs=160.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC----------cchhhhhhccC--CCCceEEEEccCCCcCCC
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------PEKATTLFGKQ--DEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~----------~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~  144 (333)
                      +..+.+|++|||||+|+||+++++.|+++|++|++++|+          .+..+......  .+.++.++.+|++|++++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQA  101 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHH
Confidence            556778999999999999999999999999999999987          34433332211  145788899999999988


Q ss_pred             chhhhc-------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC--------C---CCeEEEEecc
Q 019935          145 DPAIFE-------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS--------S---LKRIVLVSSV  203 (333)
Q Consensus       145 ~~~~~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~--------~---~~~~v~~SS~  203 (333)
                      + ++++       ++|+||||||......   ...+.....+++|+.+++++++++..        +   -++||++||.
T Consensus       102 ~-~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          102 A-GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             H-HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             H-HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            7 5543       8999999999864211   11222334678999999999986621        1   2599999999


Q ss_pred             ccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCc
Q 019935          204 GVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDK  278 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (333)
                      .++.    +......|+.+|.     .+.+...+...|+++++|+|| + .++.........            ......
T Consensus       181 ~~~~----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~-~t~~~~~~~~~~------------~~~~~~  242 (322)
T 3qlj_A          181 AGLQ----GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-A-RTRMTETVFAEM------------MATQDQ  242 (322)
T ss_dssp             HHHH----CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-T-TSCCSCCSCCC-------------------
T ss_pred             HHcc----CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-C-CCccchhhhhhh------------hhcccc
Confidence            8865    4445566776664     233444556689999999999 5 343322111100            011122


Q ss_pred             ccccccHHHHHHHHHHhccCcc--cCCcEEEecCCCCCCC----------CCCcccHHHHHHHHhc
Q 019935          279 LIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVEGEGP----------GSDPQKWRELFKAAKA  332 (333)
Q Consensus       279 ~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~~~~~----------~~~~~s~~e~~~~i~~  332 (333)
                      ...+++++|+|++++++++...  ..|+++++++|.....          ....++..|+++.+.+
T Consensus       243 ~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~  308 (322)
T 3qlj_A          243 DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVAD  308 (322)
T ss_dssp             -CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence            3456789999999999998754  4599999999753210          0122356777776653

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=6.5e-26  Score=199.71  Aligned_cols=221  Identities=15%  Similarity=0.137  Sum_probs=149.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+......    ...++.++.+|++|+++++ +++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~   83 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLR-DTFRKVVDH   83 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHH-HHHHHHHHH
Confidence            45689999999999999999999999999999999987654332111    1346889999999998887 544      


Q ss_pred             -cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc----CC-C---CCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----PS-S---LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~----~~-~---~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       .++|+||||||...     .+.....+++|+.+++++++++    +. +   .++||++||..++.    +......|+
T Consensus        84 ~g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  154 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----PVAQQPVYC  154 (267)
T ss_dssp             HSCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             cCCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC----CCCCCchHH
Confidence             36899999999752     2233457888998877766533    32 2   57999999998876    334455677


Q ss_pred             HHHHH-----HH--HHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcccccccHHHHHHHH
Q 019935          221 VLKYK-----KM--GEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~--~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|..     +.  .+..+...|+++++|+||.+ .++........  ......... ..+........+++++|+|+++
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v  231 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV-NTAILESIEKE--ENMGQYIEYKDHIKDMIKYYGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCB-SSHHHHGGGCH--HHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcC-cchhhhccccc--cccchhhhHHHHHHHHhccccCCCHHHHHHHH
Confidence            66642     11  23445667999999999955 54421100000  000000000 0000011223578999999999


Q ss_pred             HHhccCcccCCcEEEecCCCC
Q 019935          293 IQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       293 ~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      +++++++...|+++++++|++
T Consensus       232 ~~l~s~~~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          232 ITLIEDDALNGAIMKITTSKG  252 (267)
T ss_dssp             HHHHHCTTCSSCEEEEETTTE
T ss_pred             HHHhcCcCCCCcEEEecCCCc
Confidence            999998767799999999743

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.92  E-value=9.8e-26  Score=195.73  Aligned_cols=215  Identities=17%  Similarity=0.083  Sum_probs=147.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc-------C
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      +|+||||||+|+||++++++|+++|++|+++ .|++++.+.+.+...  ..++.++.+|++|+++++ ++++       +
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVE-AMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHH-HHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHH-HHHHHHHHHcCC
Confidence            4689999999999999999999999999995 788766544322111  456888999999999887 5554       7


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......   ...+.....+++|+.++.++++++.     .+.++||++||..++.    +......|+.+|
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK  155 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----GNIGQANYAAAK  155 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC----CCCCCccchhhH
Confidence            999999999764211   1112223467889999999998662     3678999999997754    233445677665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      ..     +.+...+...|+++++++||.+ +++........+.....         .......+++++|+|+++++++..
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~~  225 (244)
T 1edo_A          156 AGVIGFSKTAAREGASRNINVNVVCPGFI-ASDMTAKLGEDMEKKIL---------GTIPLGRTGQPENVAGLVEFLALS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSB-CSHHHHTTCHHHHHHHH---------TSCTTCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEeeCcc-ccchhhhcChHHHHHHh---------hcCCCCCCCCHHHHHHHHHHHhCC
Confidence            42     2233344557999999999955 55432111111111111         112334689999999999999843


Q ss_pred             cc---cCCcEEEecCC
Q 019935          299 EF---TEGEIYEINSV  311 (333)
Q Consensus       299 ~~---~~g~~~~v~~g  311 (333)
                      +.   ..|+.|++++|
T Consensus       226 ~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          226 PAASYITGQAFTIDGG  241 (244)
T ss_dssp             SGGGGCCSCEEEESTT
T ss_pred             CccCCcCCCEEEeCCC
Confidence            32   35899999986

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=4.9e-26  Score=199.12  Aligned_cols=218  Identities=17%  Similarity=0.144  Sum_probs=150.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC-cchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~-~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      +++|+||||||+|+||++++++|+++|++|++++|+ +++.+.+....  ...++.++.+|++|+++++ ++++      
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQ-QLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHH-HHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHH-HHHHHHHHHc
Confidence            467899999999999999999999999999999998 66554432211  1457889999999999888 6655      


Q ss_pred             -CCcEEEEcCCC-CCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC--C---CeEEEEeccccccCCCCCccc
Q 019935          151 -GVTHVICCTGT-TAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--L---KRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       151 -~~d~vi~~a~~-~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~--~---~~~v~~SS~~~~~~~~~~~~~  215 (333)
                       ++|+||||||. .....   ...+.....+++|+.++.++++++.     .+  .   ++||++||..++..   +..+
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~~  160 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---GGPG  160 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC---CCTT
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC---CCCC
Confidence             89999999997 32110   0111123366889999999988551     12  2   79999999887641   1234


Q ss_pred             hhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ...|+.+|..     +.....+...|+++++|+||.+ +++........+.....         ......++++++|+|+
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~  230 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTV-DTAFHADKTQDVRDRIS---------NGIPMGRFGTAEEMAP  230 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-SSGGGTTCCHHHHHHHH---------TTCTTCSCBCGGGTHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCc-ccccccccCHHHHHHHh---------ccCCCCcCCCHHHHHH
Confidence            4567765532     1222333456999999999955 66653322122222111         1223457899999999


Q ss_pred             HHHHhccCcc---cCCcEEEecCC
Q 019935          291 ACIQALDIEF---TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~---~~g~~~~v~~g  311 (333)
                      +++++++++.   ..|++|++++|
T Consensus       231 ~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          231 AFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             HHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             HHHHHhCcchhccccCCEEeECCC
Confidence            9999998753   35899999986

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.92  E-value=3.2e-25  Score=193.11  Aligned_cols=210  Identities=15%  Similarity=0.104  Sum_probs=144.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|++++.+.+         ..+.+|++|+++++ +++       .+
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~D~~~~~~~~-~~~~~~~~~~g~   81 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL---------FGVEVDVTDSDAVD-RAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS---------EEEECCTTCHHHHH-HHHHHHHHHHSS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh---------cCeeccCCCHHHHH-HHHHHHHHHcCC
Confidence            45678999999999999999999999999999999987654332         13789999998887 444       37


Q ss_pred             CcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.....   ....+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  157 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----GIGNQANYAASK  157 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------CCHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc----CCCCChhHHHHH
Confidence            89999999976421   1111223446789999999999865     23678999999997754    333455677665


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.+...+...|+++++|+||.+ .++............         +....+...+++++|+|+++++++++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~---------~~~~~p~~~~~~~~dvA~~~~~l~s~  227 (247)
T 1uzm_A          158 AGVIGMARSIARELSKANVTANVVAPGYI-DTDMTRALDERIQQG---------ALQFIPAKRVGTPAEVAGVVSFLASE  227 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHHSCHHHHHH---------HGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCC-cccchhhcCHHHHHH---------HHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            4     23334455567999999999955 443211000011110         01112234689999999999999986


Q ss_pred             cc--cCCcEEEecCCC
Q 019935          299 EF--TEGEIYEINSVE  312 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~  312 (333)
                      +.  ..|+.+++++|.
T Consensus       228 ~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          228 DASYISGAVIPVDGGM  243 (247)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             cccCCcCCEEEECCCc
Confidence            43  458999999873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.92  E-value=4e-25  Score=193.02  Aligned_cols=210  Identities=15%  Similarity=0.113  Sum_probs=149.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccC--CCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDT--RNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~--~d~~~~~~~~~----  149 (333)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.++.+.......   ..++.++.+|+  +|+++++ +++    
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~~~~   87 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ-QLAQRIA   87 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH-HHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH-HHHHHHH
Confidence            4678999999999999999999999999999999999877655432221   33788999999  8887776 443    


Q ss_pred             ---cCCcEEEEcCCCCCC--CC--CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          150 ---EGVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~--~~--~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                         .++|+||||||....  +.  ...+.....+++|+.+++++++++     +.+.++||++||..++.    +.....
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~  163 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ----GRANWG  163 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS----CCTTCH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc----CCCCCc
Confidence               379999999997531  11  111122346789999999999976     33668999999998865    444556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|..     +.+...+... +++++|+||.+ .++        +.....         .......+.+++|+|+++
T Consensus       164 ~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v-~t~--------~~~~~~---------~~~~~~~~~~p~dva~~~  224 (252)
T 3f1l_A          164 AYAASKFATEGMMQVLADEYQQR-LRVNCINPGGT-RTA--------MRASAF---------PTEDPQKLKTPADIMPLY  224 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSB-SSH--------HHHHHC---------TTCCGGGSBCTGGGHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcc-cCc--------hhhhhC---------CccchhccCCHHHHHHHH
Confidence            77766642     2222333333 99999999955 322        111111         111223578899999999


Q ss_pred             HHhccCcc--cCCcEEEecCCC
Q 019935          293 IQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++.++.  ..|+.+++++|.
T Consensus       225 ~~L~s~~~~~itG~~i~vdgG~  246 (252)
T 3f1l_A          225 LWLMGDDSRRKTGMTFDAQPGR  246 (252)
T ss_dssp             HHHHSGGGTTCCSCEEESSCC-
T ss_pred             HHHcCccccCCCCCEEEeCCCc
Confidence            99998765  459999999984

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.92  E-value=1.3e-25  Score=195.00  Aligned_cols=215  Identities=14%  Similarity=0.070  Sum_probs=146.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEE-EEccCCCcCCCchhhh-------c
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQV-CKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~-v~~D~~d~~~~~~~~~-------~  150 (333)
                      +|+||||||+|+||++++++|+++|++|+++ +|+.++.+.+....  .+.++.. +.+|++|+++++ +++       .
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAAT-ALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHH-HHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHH-HHHHHHHHhcC
Confidence            4689999999999999999999999999998 78876655432211  1345666 899999998887 543       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.++.++++++    + .+.++||++||..++.    +......|+.+
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s  155 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL----GNPGQANYVAS  155 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCSSBHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc----CCCCCcchHHH
Confidence            8999999999754210   111223346788999977777644    2 3678999999987654    23344567766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+...|+++++|+||.+ +++........+.....         .......+++++|+|+++++++.
T Consensus       156 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~  225 (245)
T 2ph3_A          156 KAGLIGFTRAVAKEYAQRGITVNAVAPGFI-ETEMTERLPQEVKEAYL---------KQIPAGRFGRPEEVAEAVAFLVS  225 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTSCHHHHHHHH---------HTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEEEee-cCcchhhcCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhC
Confidence            542     2233344556999999999955 55432111111111111         01123468999999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      ++.  ..|+.|++++|
T Consensus       226 ~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          226 EKAGYITGQTLCVDGG  241 (245)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             cccccccCCEEEECCC
Confidence            754  34899999986

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.92  E-value=2.9e-25  Score=193.95  Aligned_cols=206  Identities=12%  Similarity=0.027  Sum_probs=139.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.....  +.++.++.+|++|+++++ ++++      
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVT-AFLNAADAHA   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHHHS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHH-HHHHHHHhhC
Confidence            4567899999999999999999999999999999999887665543221  457899999999999888 5554      


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||..++.    +......|+.+
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  158 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR----GGSGFAAFASA  158 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----CCTTCHHHHHH
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----CCCCCccHHHH
Confidence            7899999999864211   111223346788999999999865    2 3567999999998875    44556677766


Q ss_pred             HH-----HHHHHHHHHhcCCCE-EEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KY-----KKMGEDFVQKSGLPF-TIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~-~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |.     .+.+...+...|+++ ++|+||.+ .++.........         ...+....... +++++|+|+++++++
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v-~T~~~~~~~~~~---------~~~~~~~~~~~-~~~pedvA~~~~~l~  227 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGV-DTAWVRERREQM---------FGKDALANPDL-LMPPAAVAGAYWQLY  227 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCcc-CChhhhccchhh---------hhhhhhcCCcc-CCCHHHHHHHHHHHH
Confidence            64     234445566779999 89999954 554332111110         00111122333 899999999999999


Q ss_pred             cCcc
Q 019935          297 DIEF  300 (333)
Q Consensus       297 ~~~~  300 (333)
                      +++.
T Consensus       228 s~~~  231 (252)
T 3h7a_A          228 QQPK  231 (252)
T ss_dssp             HCCG
T ss_pred             hCch
Confidence            8755

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.92  E-value=3.4e-25  Score=196.50  Aligned_cols=222  Identities=13%  Similarity=0.130  Sum_probs=157.0

Q ss_pred             CCCCCCCCCeEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhh-
Q 019935           75 KVTPASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-  149 (333)
Q Consensus        75 ~~~~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-  149 (333)
                      ..|..+++|+||||||+|+  ||++++++|+++|++|++++|+.  +..+.+...  ..++.++.+|++|+++++ +++ 
T Consensus        19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~-~~~~   95 (280)
T 3nrc_A           19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAE--FNPAAVLPCDVISDQEIK-DLFV   95 (280)
T ss_dssp             ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGG--GCCSEEEECCTTCHHHHH-HHHH
T ss_pred             CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHh--cCCceEEEeecCCHHHHH-HHHH
Confidence            3466778899999999955  99999999999999999999987  444444333  345889999999998887 444 


Q ss_pred             ------cCCcEEEEcCCCCCCC---C-----CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCC
Q 019935          150 ------EGVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNEL  211 (333)
Q Consensus       150 ------~~~d~vi~~a~~~~~~---~-----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~  211 (333)
                            .++|+||||||.....   .     ...+.....+++|+.++.++++++    +...++||++||..++.    
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----  171 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----  171 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS----
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc----
Confidence                  3689999999986421   0     112223346788999999999966    22457999999998876    


Q ss_pred             CccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCccccccc
Q 019935          212 PWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       212 ~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      +......|+.+|..     +.+...+...|+++++|+||.+ .++......  ..+.....         .......+++
T Consensus       172 ~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~~~~~  241 (280)
T 3nrc_A          172 AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPI-KTLAASGISNFKKMLDYNA---------MVSPLKKNVD  241 (280)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-CCSGGGGCTTHHHHHHHHH---------HHSTTCSCCC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccc-cchhhhcCcchHHHHHHHH---------hcCCCCCCCC
Confidence            55566677766642     3334455667999999999955 665432211  11111111         1123346789


Q ss_pred             HHHHHHHHHHhccCcc--cCCcEEEecCCCC
Q 019935          285 RIVVAEACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++|+|+++++++.+..  ..|+++++++|..
T Consensus       242 pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          242 IMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             HHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            9999999999998754  5599999999843

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.92  E-value=9.4e-26  Score=198.15  Aligned_cols=222  Identities=11%  Similarity=0.117  Sum_probs=147.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccC--CCCceEEEEccCCCcCCCchhhh--
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF--  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~--  149 (333)
                      ++++++|++|||||+|+||++++++|+++|++|++++|...   ..+++....  .+.++.++.+|++|+++++ +++  
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~   84 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVA-KLFDF   84 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHH-HHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHH
Confidence            45678899999999999999999999999999999987543   233222211  1457889999999999888 554  


Q ss_pred             -----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhh
Q 019935          150 -----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 -----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                           .++|+||||||......   ...+.....+++|+.+++++++++..   +.++||++||..++.    +......
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~----~~~~~~~  160 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA----YTGFYST  160 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH----HHCCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc----CCCCCch
Confidence                 37999999999764211   11122234677899999999997632   346999999998765    2333345


Q ss_pred             hHHHH-----HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLK-----YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k-----~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|     ..+.+...+...|+++++|+||.+ .++.        ............+........+.+++|+|++++
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~--------~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~  231 (262)
T 3ksu_A          161 YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPM-DTSF--------FYGQETKESTAFHKSQAMGNQLTKIEDIAPIIK  231 (262)
T ss_dssp             -----CHHHHHHHHHHHHTTTTTCEEEEEEECCC-CTHH--------HHTCC------------CCCCSCCGGGTHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCC-cCcc--------ccccCchHHHHHHHhcCcccCCCCHHHHHHHHH
Confidence            65554     334445555667999999999955 3321        110000111111222334457889999999999


Q ss_pred             HhccCcc-cCCcEEEecCCC
Q 019935          294 QALDIEF-TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~-~~g~~~~v~~g~  312 (333)
                      +++++.. ..|+.++++||.
T Consensus       232 ~L~s~~~~itG~~i~vdGg~  251 (262)
T 3ksu_A          232 FLTTDGWWINGQTIFANGGY  251 (262)
T ss_dssp             HHHTTTTTCCSCEEEESTTC
T ss_pred             HHcCCCCCccCCEEEECCCc
Confidence            9998722 459999999974

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.92  E-value=1.4e-25  Score=200.14  Aligned_cols=222  Identities=13%  Similarity=0.055  Sum_probs=154.0

Q ss_pred             CCCCCCCeEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|+  ||++++++|+++|++|++++|+++..+...+.. ...++.++.+|++|+++++ +++    
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASID-AVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHH-HHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHH-HHHHHHH
Confidence            44577899999999977  999999999999999999999864332221110 0246889999999999887 544    


Q ss_pred             ---cCCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          150 ---EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                         .++|+||||||....     +  ....+.....+++|+.+++++++++..   ..++||++||..++.    +....
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----~~~~~  180 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----VMPNY  180 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----BCTTT
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----CCCch
Confidence               379999999997631     1  111222334678899999999997632   246999999998876    44555


Q ss_pred             hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|.     .+.+...+...|+++++|+||.+ +++.....  .........         .......+.+++|+|
T Consensus       181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA  250 (293)
T 3grk_A          181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPI-KTLAASGIGDFRYILKWNE---------YNAPLRRTVTIDEVG  250 (293)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CC------CCHHHHHHHHH---------HHSTTSSCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCC-cchhhhcccchHHHHHHHH---------hcCCCCCCCCHHHHH
Confidence            67776664     23444556677999999999955 66543211  111111111         112345688999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++++++..  ..|+++++++|..
T Consensus       251 ~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          251 DVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCccccCCcceEEEECCCcc
Confidence            99999998754  5599999999854

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.92  E-value=3.7e-25  Score=191.21  Aligned_cols=195  Identities=14%  Similarity=0.085  Sum_probs=139.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      ++|++|||||+|+||++++++|+++|++|++++|+.++.+...... ..++.++.+|++|+++++ +++       .++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-GNAVIGIVADLAHHEDVD-VAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTSHHHHH-HHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCceEEECCCCCHHHHH-HHHHHHHHhcCCCc
Confidence            3579999999999999999999999999999999988776654433 336899999999998887 444       3789


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      +||||||......   ...+.....+++|+.|++++++++    +...++||++||..++.    +......|+.+|.. 
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV----GKANESLYCASKWGM  155 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS----SCSSHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC----CCCCCcHHHHHHHHH
Confidence            9999999854211   112223346789999999999866    22224999999998865    44556677766642 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                          +.+...+...|+++++|+||.+ .++....    ..              ......+++++|+|++++++++++.
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~----~~--------------~~~~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGI-RSEFWDN----TD--------------HVDPSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEE-CCCC-----------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCc-cCcchhc----cC--------------CCCCcCCCCHHHHHHHHHHHHhCCC
Confidence                3333445567999999999955 5443211    00              0112268899999999999998654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.92  E-value=1.5e-24  Score=192.82  Aligned_cols=216  Identities=14%  Similarity=0.103  Sum_probs=150.3

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhh-----
Q 019935           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        80 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      +.+|+||||||+  |+||+++++.|+++|++|++++|+.+   ..+.+...  ..++.++.+|++|+++++ +++     
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~-~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG--FGSDLVVKCDVSLDEDIK-NLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEcCCCCHHHHH-HHHHHHHH
Confidence            677899999999  99999999999999999999999874   22222221  124788999999998887 544     


Q ss_pred             --cCCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC----CCCeEEEEeccccccCCCCCccch
Q 019935          150 --EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        .++|+||||||....     +  ....+.....+++|+.|++++++++..    ..++||++||.+++.    +....
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  171 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----VVPHY  171 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----BCTTT
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----CCCCc
Confidence              379999999997531     0  111122334678899999999997632    237999999988765    33445


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++.....  ...+......         ......+++++|+|
T Consensus       172 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dva  241 (285)
T 2p91_A          172 NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPV-KTLAAYSITGFHLLMEHTTK---------VNPFGKPITIEDVG  241 (285)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-CCSCC--CTTHHHHHHHHHH---------HSTTSSCCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcc-cCchhhcccchHHHHHHHHh---------cCCCCCCcCHHHHH
Confidence            567766642     2333445567999999999954 67654321  1222111111         11233578999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++.+..  ..|+.+++++|.
T Consensus       242 ~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          242 DTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHcCCcccCCCCCEEEECCCc
Confidence            99999998644  358999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.92  E-value=9.3e-25  Score=194.45  Aligned_cols=218  Identities=14%  Similarity=0.095  Sum_probs=150.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC---CCCceEEEEccCCC----cCCCchhh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ---DEETLQVCKGDTRN----PKDLDPAI  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~---~~~~~~~v~~D~~d----~~~~~~~~  148 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+. ++.+.+....   .+.++.++.+|++|    +++++ ++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~-~~   96 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE-EI   96 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH-HH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH-HH
Confidence            3456788999999999999999999999999999999997 6554433221   14578899999999    66666 44


Q ss_pred             h-------cCCcEEEEcCCCCCCCCC-------------CCCCCCCCcchhHHHHHHHHHhc----CC-C------CCeE
Q 019935          149 F-------EGVTHVICCTGTTAFPSR-------------RWDGDNTPEKVDWEGVRNLVSAL----PS-S------LKRI  197 (333)
Q Consensus       149 ~-------~~~d~vi~~a~~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~a~----~~-~------~~~~  197 (333)
                      +       .++|+||||||.......             ..+.....+++|+.+++++++++    +. +      .++|
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            3       489999999997642111             00111235678999999998865    22 3      5699


Q ss_pred             EEEeccccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceee
Q 019935          198 VLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVL  272 (333)
Q Consensus       198 v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (333)
                      |++||..++.    +......|+.+|.     .+.+...+...|+++++|+||.+ +++. .. .........       
T Consensus       177 v~isS~~~~~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~t~~-~~-~~~~~~~~~-------  242 (288)
T 2x9g_A          177 VNLCDAMVDQ----PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVS-LLPV-AM-GEEEKDKWR-------  242 (288)
T ss_dssp             EEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSC-SCCT-TS-CHHHHHHHH-------
T ss_pred             EEEecccccC----CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccc-cCcc-cc-ChHHHHHHH-------
Confidence            9999998875    4455567777664     23344555667999999999954 6665 21 111111111       


Q ss_pred             cCCCCccccc-ccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          273 MGQGDKLIGE-VSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       273 ~~~~~~~~~~-i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                        .......+ .+++|+|+++++++....  ..|+.+.+++|
T Consensus       243 --~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          243 --RKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             --HTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --hhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence              01122345 799999999999998743  45899999986

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.92  E-value=1.7e-25  Score=197.35  Aligned_cols=230  Identities=14%  Similarity=0.094  Sum_probs=153.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhhh----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      +.++++|++|||||+|+||++++++|+++|++|++++|+. +..+.+.+..  .+.++.++.+|++|+++++ +++    
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   91 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIV-KLFDQAV   91 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHH
Confidence            3456789999999999999999999999999999987653 3333322211  1567899999999999887 544    


Q ss_pred             ---cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-CC--CCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 ---EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SS--LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~~--~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                         .++|+||||||......   ...+.....+++|+.|++++++++. ..  .++||++||.....   .+......|+
T Consensus        92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~~Y~  168 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---FSVPKHSLYS  168 (270)
T ss_dssp             HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---CCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---CCCCCCchhH
Confidence               37999999999864221   1122234467899999999999762 22  35999999987321   1344556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHH---HhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK---ATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++........+..   ..........+....+...+.+++|+|+++
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  247 (270)
T 3is3_A          169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGT-VTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVV  247 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCc-cChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            6664     23444555667999999999955 55542100000000   000000000111123455788999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++..  ..|++++++||
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          248 GFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             HHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHcCCccCCccCcEEEeCCC
Confidence            99998754  45999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.92  E-value=5.1e-25  Score=194.52  Aligned_cols=218  Identities=19%  Similarity=0.169  Sum_probs=146.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      ++|+||||||+|+||++++++|+++|++|+++ .|+.+..+.+....  ...++.++.+|++|+++++ +++       .
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIA-AMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHhCC
Confidence            46799999999999999999999999999887 66665554433211  1457889999999998887 444       3


Q ss_pred             CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----CC----CCCeEEEEeccccccCCCCCccchhh
Q 019935          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PS----SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~----~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      ++|+||||||......    ...+.....+++|+.++.++++++    +.    +.++||++||..++...   ......
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~~  180 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS---ATQYVD  180 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC---TTTCHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC---CCCcch
Confidence            7899999999864211    112223446789999999998865    11    35689999999876421   112345


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ +++......   .     ......+........+.+++|+|++++
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~edvA~~i~  251 (272)
T 4e3z_A          181 YAASKAAIDTFTIGLAREVAAEGIRVNAVRPGII-ETDLHASGG---L-----PDRAREMAPSVPMQRAGMPEEVADAIL  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-C--------------------------CCTTSSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCC-cCCcccccC---C-----hHHHHHHhhcCCcCCCcCHHHHHHHHH
Confidence            6665542     2333445566999999999955 555432100   0     001111122334556889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++...  ..|++|++++|
T Consensus       252 ~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          252 YLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCCccccccCCEEeecCC
Confidence            9998654  45999999986

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-25  Score=197.97  Aligned_cols=221  Identities=13%  Similarity=0.072  Sum_probs=152.8

Q ss_pred             CCCCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhc---
Q 019935           77 TPASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ....++|+||||||+  |+||++++++|+++|++|++++|+....+.+.+.. ...++.++.+|++|+++++ ++++   
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   87 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID-ALFASLK   87 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH-HHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH-HHHHHHH
Confidence            446778999999999  99999999999999999999999854333221110 0345889999999999887 5543   


Q ss_pred             ----CCcEEEEcCCCCCCC---C-----CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccc
Q 019935          151 ----GVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~---~-----~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                          ++|+||||||.....   .     ...+.....+++|+.++.++++++..   ..++||++||.+++.    +...
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~  163 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----AIPN  163 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTT
T ss_pred             HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----CCCC
Confidence                789999999976420   0     11122234678899999999997633   235899999998875    4555


Q ss_pred             hhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|..     +.+...+...|+++++|+||.+ .++......  ..+.....         .......+.+++|+
T Consensus       164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~pedv  233 (271)
T 3ek2_A          164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPI-KTLAASGIKSFGKILDFVE---------SNSPLKRNVTIEQV  233 (271)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC------CCCHHHHHHHHHHH---------HHSTTSSCCCHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc-cchhhhcccchHHHHHHHH---------hcCCcCCCCCHHHH
Confidence            6677766642     3334455667999999999955 555433211  11111111         12234567899999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      |+++++++.+..  ..|+++++++|.
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~  259 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGF  259 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTG
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCe
Confidence            999999998744  559999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.92  E-value=4.8e-25  Score=193.65  Aligned_cols=210  Identities=14%  Similarity=0.128  Sum_probs=145.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      |..+.+|+||||||+|+||++++++|+++|++|++++|+.++.+.+....  .+.++.++.+|++|+++++ +++     
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIA-AFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHH-HHHHHHHH
Confidence            56677899999999999999999999999999999999987766543222  1457889999999999887 444     


Q ss_pred             --cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          150 --EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                        .++|+||||||......    ...+.....+++|+.|+.++++++     +.+.++||++||..++.    +......
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  178 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN----PVADGAA  178 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC----CCTTCHH
T ss_pred             hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC----CCCCCch
Confidence              46999999999732111    111223346789999999999965     23567999999998875    4555667


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ .++....        .         ........+++++|+|++++
T Consensus       179 Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~--------~---------~~~~~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          179 YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSV-RTEFGVG--------L---------SAKKSALGAIEPDDIADVVA  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCC-cCCcccc--------c---------ccccccccCCCHHHHHHHHH
Confidence            8766642     3333445567999999999955 4332110        0         01122346789999999999


Q ss_pred             HhccCcc--cCCcEEEec
Q 019935          294 QALDIEF--TEGEIYEIN  309 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~  309 (333)
                      ++++.+.  ..++++...
T Consensus       241 ~l~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          241 LLATQADQSFISEVLVRP  258 (262)
T ss_dssp             HHHTCCTTCCEEEEEEEC
T ss_pred             HHhcCccccccCcEEecc
Confidence            9998754  225544443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.92  E-value=1e-24  Score=191.92  Aligned_cols=216  Identities=13%  Similarity=0.114  Sum_probs=149.4

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc---chhhhhhccCCCCceEEEEccCCCcCCCchhhhc----
Q 019935           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        80 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      +++|+||||||+  |+||++++++|+++|++|++++|+.   +..+.+...  .....++.+|++|+++++ ++++    
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~-~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLQCDVAEDASID-TMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHH-HHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh--cCCcEEEEccCCCHHHHH-HHHHHHHH
Confidence            567899999999  9999999999999999999999987   222222221  123478899999998887 5543    


Q ss_pred             ---CCcEEEEcCCCCCC-----C--C-CCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccch
Q 019935          151 ---GVTHVICCTGTTAF-----P--S-RRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~-----~--~-~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                         ++|+||||||....     +  . ...+.....+++|+.+++++++++.. .  .++||++||..++.    +....
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  159 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNY  159 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTT
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----CCCCc
Confidence               78999999997531     0  0 11222344778999999999997633 1  25999999988765    33445


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++.....  ...+......         ......+++++|+|
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~---------~~p~~~~~~~~dva  229 (265)
T 1qsg_A          160 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPI-RTLAASGIKDFRKMLAHCEA---------VTPIRRTVTIEDVG  229 (265)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCC-CCTTGGGSTTHHHHHHHHHH---------HSTTSSCCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCC-ccchhhcccccHHHHHHHHh---------cCCCCCCCCHHHHH
Confidence            567766542     2233344456999999999955 67653221  1122111111         11234678999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++++++++.  ..|+.+++++|.
T Consensus       230 ~~v~~l~s~~~~~~tG~~~~vdgG~  254 (265)
T 1qsg_A          230 NSAAFLCSDLSAGISGEVVHVDGGF  254 (265)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCccCCEEEECCCc
Confidence            99999998754  358999999974

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.92  E-value=1.1e-24  Score=193.35  Aligned_cols=226  Identities=14%  Similarity=0.078  Sum_probs=153.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+++.... ..++.++.+|++|+++++ +++       .+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDVRSLQDQK-RAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCCCCHHHHH-HHHHHHHHhcCC
Confidence            456789999999999999999999999999999999988776655433 567899999999998877 443       47


Q ss_pred             CcEEEEcCCCCCCCCCCCC--------CCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          152 VTHVICCTGTTAFPSRRWD--------GDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      +|+||||||.........+        .....+++|+.+++++++++.    ...++||++||..++.    +......|
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  155 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY----PNGGGPLY  155 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----SSSSCHHH
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc----CCCCCchh
Confidence            8999999997542111000        122356799999999999762    2236999999998875    44555667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHH-hhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKA-TAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +.+|..     +.+...+... +++++|+||.+ .++............ .........+....+...+.+++|+|++++
T Consensus       156 ~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  233 (281)
T 3zv4_A          156 TATKHAVVGLVRQMAFELAPH-VRVNGVAPGGM-NTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYV  233 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSS-CC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcC-cCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            766642     2333334444 99999999955 555432110000000 000000001112234567889999999999


Q ss_pred             HhccCcc---cCCcEEEecCCC
Q 019935          294 QALDIEF---TEGEIYEINSVE  312 (333)
Q Consensus       294 ~~l~~~~---~~g~~~~v~~g~  312 (333)
                      ++++++.   ..|++++++||-
T Consensus       234 fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          234 FFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             HHHSTTTSTTCSSCEEEESSSG
T ss_pred             HhhcccccccccCcEEEECCCC
Confidence            9998433   459999999975

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.92  E-value=9.1e-25  Score=192.22  Aligned_cols=220  Identities=16%  Similarity=0.134  Sum_probs=154.8

Q ss_pred             CCCCCeEEEEcCCCh--HHHHHHHHHHhCCCeEEEEEcCcchhhh---hhccCCCCceEEEEccCCCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ++++|++|||||+|+  ||++++++|+++|++|++++|+.+..+.   +.......++.++.+|++|+++++ +++    
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~   82 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIE-TCFASIK   82 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHH-HHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHH-HHHHHHH
Confidence            467899999999977  9999999999999999999998643332   222322347899999999999887 544    


Q ss_pred             ---cCCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          150 ---EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                         .++|+||||||....     +  ....+.....+++|+.++.++++++..   ..++||++||..++.    +....
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  158 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL----VMPNY  158 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----CCTTT
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc----cCCCc
Confidence               378999999997531     0  011122234568899999999997632   235999999998875    45556


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ .++.....  ...+.....         .......+.+++|+|
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva  228 (266)
T 3oig_A          159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPI-RTLSAKGISDFNSILKDIE---------ERAPLRRTTTPEEVG  228 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-CSGGGTTCTTHHHHHHHHH---------HHSTTSSCCCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc-cccccccccchHHHHHHHH---------hcCCCCCCCCHHHHH
Confidence            677766642     3344455667999999999955 55432211  111111111         112334678999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++++++.++.  ..|+++++++|-.
T Consensus       229 ~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          229 DTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHcCCchhcCcCCEEEECCCeE
Confidence            99999998754  5599999999753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=191.48  Aligned_cols=222  Identities=14%  Similarity=0.068  Sum_probs=151.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+.+....  .++.++.+|++|+++++ ++++       +
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g~   82 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--PGAVFILCDVTQEDDVK-TLVSETIRRFGR   82 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--TTEEEEECCTTSHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCCeEEEcCCCCHHHHH-HHHHHHHHHcCC
Confidence            456789999999999999999999999999999999987766554332  35888999999998887 5543       7


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||......    ...+.....+++|+.+++++++++.    ...++||++||..++.    +......|+.+|
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  158 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----GQAQAVPYVATK  158 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----CCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC----CCCCCcccHHHH
Confidence            999999999753211    0111123467899999999999762    2357999999987654    223345676665


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      .     .+.+...+...|+++++|+||.+ +++...    .+....... ..........+...+.+++|+|++++++++
T Consensus       159 aa~~~~~~~la~e~~~~gi~vn~v~Pg~v-~t~~~~----~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s  233 (270)
T 1yde_A          159 GAVTAMTKALALDESPYGVRVNCISPGNI-WTPLWE----ELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS  233 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSB-CCHHHH----HHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEeCcc-ccchhh----hhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc
Confidence            4     23333445567999999999955 554211    100000000 000000011233467899999999999998


Q ss_pred             Ccc-cCCcEEEecCCC
Q 019935          298 IEF-TEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~-~~g~~~~v~~g~  312 (333)
                      +.. ..|+.+.++||.
T Consensus       234 ~~~~itG~~i~vdGG~  249 (270)
T 1yde_A          234 EANFCTGIELLVTGGA  249 (270)
T ss_dssp             HCTTCCSCEEEESTTT
T ss_pred             cCCCcCCCEEEECCCe
Confidence            632 458999999974

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.6e-24  Score=194.26  Aligned_cols=223  Identities=12%  Similarity=0.077  Sum_probs=151.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-------CCCceEEEEccCCCcCCCchhhhc-
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAIFE-  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~D~~d~~~~~~~~~~-  150 (333)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.++.+......       ...++.++.+|++|+++++ ++++ 
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~   93 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN-NLVKS   93 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH-HHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH-HHHHH
Confidence            466789999999999999999999999999999999987655432211       1457899999999998887 5544 


Q ss_pred             ------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CCCCeEEEEeccccccCCCCCccch
Q 019935          151 ------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 ------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                            ++|+||||||......   ...+.....+++|+.++.++++++.     .+.++||++||.. +.    +....
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~----~~~~~  168 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA----GFPLA  168 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT----CCTTC
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc----CCCcc
Confidence                  6999999999643211   1111223457899999999999752     2457899999988 32    33344


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++..........     ......+........+++++|+|++
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~dvA~~  242 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI-YSQTAVENYGSWG-----QSFFEGSFQKIPAKRIGVPEEVSSV  242 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB-CCTGGGTTSGGGG-----GGGGTTGGGGSTTSSCBCTHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCc-ccchhhhhccccc-----hHHHHHHHhcCcccCCCCHHHHHHH
Confidence            566655532     2333344556999999999955 6763110000000     0000000111233468999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCCC
Q 019935          292 CIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      ++++++++.  ..|+.+++++|..
T Consensus       243 i~~l~~~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          243 VCFLLSPAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCcccccCCCcEEEECCCee
Confidence            999998754  4589999999854

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.92  E-value=7.4e-25  Score=190.77  Aligned_cols=205  Identities=17%  Similarity=0.161  Sum_probs=143.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+.+.+..  .+.++.++.+|++|+++++ +++       .
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~-~~~~~~~~~~g   83 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVD-AAVASTVEALG   83 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHHcC
Confidence            56789999999999999999999999999999999987665543221  1456889999999998887 544       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...++....+++|+.|++++++++     +.+ ++||++||..++.    +......|+.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----~~~~~~~Y~as  158 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV----NVRNAAVYQAT  158 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC----CCCCCcHHHHH
Confidence            8999999999753211   111122345788999999999866     225 7999999998865    34455667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |.     .+.+..++...|+++++|+||.+ .++...... ........      ...   ....+++++|+|+++++++
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~------~~~---~~~~~~~pedvA~~v~~l~  228 (247)
T 2jah_A          159 KFGVNAFSETLRQEVTERGVRVVVIEPGTT-DTELRGHITHTATKEMYE------QRI---SQIRKLQAQDIAEAVRYAV  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSB-SSSGGGGCCCHHHHHHHH------HHT---TTSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCCC-CCcchhcccchhhHHHHH------hcc---cccCCCCHHHHHHHHHHHh
Confidence            64     24445556678999999999955 555422111 11101000      001   1112589999999999999


Q ss_pred             cCcc
Q 019935          297 DIEF  300 (333)
Q Consensus       297 ~~~~  300 (333)
                      +++.
T Consensus       229 s~~~  232 (247)
T 2jah_A          229 TAPH  232 (247)
T ss_dssp             HSCT
T ss_pred             CCCc
Confidence            8754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=1.1e-24  Score=193.50  Aligned_cols=225  Identities=12%  Similarity=0.088  Sum_probs=150.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.++ .+.+.+..  .+.++.++.+|++|+++++ +++     
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~  103 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIV-RMFEEAVK  103 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHH-HHHHHHHH
Confidence            34677899999999999999999999999999999998654 22221111  1457889999999988877 443     


Q ss_pred             --cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-C--CCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 --EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S--SLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                        .++|+||||||......   ...+.....+++|+.|++++++++. .  +.++||++||..++...   ......|+.
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~~Y~a  180 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA---VPKHAVYSG  180 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS---CSSCHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC---CCCCcchHH
Confidence              47999999999764211   1112233468899999999999762 2  45799999998876421   112456776


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh-hc-----ccceeecCC--CCcccccccHHHH
Q 019935          222 LKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT-AG-----ERRAVLMGQ--GDKLIGEVSRIVV  288 (333)
Q Consensus       222 ~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~-~~-----~~~~~~~~~--~~~~~~~i~v~Dv  288 (333)
                      +|..     +.+...+...|+++++|+||.+ +++...    .+.... ..     ......+..  ......+.+++|+
T Consensus       181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  255 (283)
T 1g0o_A          181 SKGAIETFARCMAIDMADKKITVNVVAPGGI-KTDMYH----AVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI  255 (283)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-SSHHHH----HHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcc-cchhhh----hhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHH
Confidence            6542     3333445567999999999955 544211    000000 00     000000111  2234568899999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |++++++++++.  ..|+++++++|
T Consensus       256 A~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          256 ARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCccccCcCCCEEEeCCC
Confidence            999999998754  45899999987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.92  E-value=2.3e-25  Score=194.35  Aligned_cols=212  Identities=13%  Similarity=0.106  Sum_probs=147.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhh----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+...+..     ...++.++.+|++|+++++ +++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~   82 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKAD-TEIKDIH   82 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHH-HHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHH-HHHHHHH
Confidence            456789999999999999999999999999999999987765543321     1267889999999998887 444    


Q ss_pred             ---cCCcEEEEcCCCCCCCCC--CCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 ---EGVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 ---~~~d~vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                         .++|+||||||.......  ..+.....+++|+.+++++++++    + .+.++||++||...+.    +..+...|
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  158 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY----GFADGGIY  158 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCTTHH
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC----CCCCCcch
Confidence               479999999998642111  11222346788999999999976    2 3567999999998764    23335567


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+...+...|+++++|+||.+ .++        +.....         .......+++++|+|+++++
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~--------~~~~~~---------~~~~~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWV-NTD--------MAKKAG---------TPFKDEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CSH--------HHHHTT---------CCSCGGGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc-cCc--------hhhhcC---------CCcccccCCCHHHHHHHHHH
Confidence            76664     23444555667999999999955 322        111111         11233568999999999999


Q ss_pred             hccCcc---cCCcEEEecCCCC
Q 019935          295 ALDIEF---TEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~---~~g~~~~v~~g~~  313 (333)
                      +++++.   ..+.++.+++|+-
T Consensus       221 l~s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          221 LLNLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             HHTSCTTEECCEEEEEEHHHHH
T ss_pred             HHcCCCceEeeEEEEEeecccc
Confidence            999764   2345677777643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=3.1e-25  Score=198.77  Aligned_cols=213  Identities=16%  Similarity=0.125  Sum_probs=145.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE----  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~----  150 (333)
                      +.++.+|+||||||+|+||++++++|+++|++|++++|+.++.+......  .+.++.++.+|++|+++++ ++++    
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~  104 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMV-RLADEAFR  104 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHH-HHHHHHHH
Confidence            44567899999999999999999999999999999999987766543322  1457899999999999887 5543    


Q ss_pred             ---CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CC-CCeEEEEeccccccCCCCCccchhh
Q 019935          151 ---GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~-~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                         ++|+||||||......   ...+.....+++|+.|+.++++++    + .+ .++||++||..++.    +......
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  180 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV----PNAGLGT  180 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----CCTTBHH
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----CCCCchH
Confidence               8999999999864211   112223447789999999999975    1 23 57999999998875    4556667


Q ss_pred             hHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHh-----hcccceeecCCCCcccccccHHHH
Q 019935          219 FGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKAT-----AGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       219 ~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      |+.+|..     +.+...+...|+++++|+||.+ .++..    .......     ........++.......+++++|+
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  255 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVV-ETKLV----SNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV  255 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCC-CSSHH----HHHHHHC----------------------CCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcc-ccccc----cccccccchhhccccChhhhccccccccCCCCHHHH
Confidence            8777642     3344455667999999999955 44421    1111000     000111122223344568999999


Q ss_pred             HHHHHHhccCc
Q 019935          289 AEACIQALDIE  299 (333)
Q Consensus       289 a~a~~~~l~~~  299 (333)
                      |+++++++..+
T Consensus       256 A~~i~~~l~~~  266 (301)
T 3tjr_A          256 ARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHhcC
Confidence            99999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.91  E-value=7.9e-25  Score=194.69  Aligned_cols=218  Identities=14%  Similarity=0.153  Sum_probs=153.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh--
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF--  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~--  149 (333)
                      ++.+|++|||||+|+||++++++|+++|+   +|++++|+.++.+++.+..    .+.++.++.+|++|+++++ +++  
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~  108 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIK-PFIEN  108 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHH-HHHHT
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHH-HHHHH
Confidence            35678999999999999999999999987   9999999987766554322    2457889999999999887 444  


Q ss_pred             -----cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccc
Q 019935          150 -----EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       150 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                           .++|+||||||......    ...+.....+++|+.|++++++++    + .+.++||++||..++.    +...
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~  184 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD----AYPT  184 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTT
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC----CCCC
Confidence                 47899999999753111    112223446789999999999976    2 3668999999998875    4455


Q ss_pred             hhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccc-ce-eecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER-RA-VLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|..     +.+..++...|+++++|+||.+ .++...       ....... .. ..+    ....+++++|+
T Consensus       185 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v-~T~~~~-------~~~~~~~~~~~~~~----~~~~p~~pedv  252 (287)
T 3rku_A          185 GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLV-ETEFSL-------VRYRGNEEQAKNVY----KDTTPLMADDV  252 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCE-ESSHHH-------HHTTTCHHHHHHHH----TTSCCEEHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcC-cCcccc-------ccccCcHHHHHHhh----cccCCCCHHHH
Confidence            6677766642     3334445567999999999955 443210       0000000 00 000    01124589999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCCCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g~~  313 (333)
                      |++++++++++.  ..|+++.+.+|+.
T Consensus       253 A~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          253 ADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            999999999865  3488999988753

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.91  E-value=1.3e-24  Score=189.95  Aligned_cols=215  Identities=15%  Similarity=0.136  Sum_probs=146.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcc--hhhhhhccCCCCceEEEEccCCCc-CCCchhhh-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-----  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~-----  149 (333)
                      ++++|+|+||||+|+||++++++|+++|++ |++++|+.+  ..+++.+.....+++++.+|++|+ ++++ +++     
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~   80 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESK-KLLKKIFD   80 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHH-HHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHH-HHHHHHHH
Confidence            356789999999999999999999999997 999999863  333333322245688999999998 7776 444     


Q ss_pred             --cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-----CC---CCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-----SS---LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-----~~---~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||...     .+.....+++|+.++.++++++.     .+   .++||++||..++.    +......|
T Consensus        81 ~~g~id~lv~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  151 (254)
T 1sby_A           81 QLKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN----AIHQVPVY  151 (254)
T ss_dssp             HHSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTSHHH
T ss_pred             hcCCCCEEEECCccCC-----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc----CCCCchHH
Confidence              38999999999742     23345578999999999998662     12   46899999998875    34445667


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|..     +.+...+...|+++++|+||.+ +++...... .+   .........+   .....+.+++|+|+++++
T Consensus       152 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v-~t~~~~~~~-~~---~~~~~~~~~~---~~~~~~~~~~dvA~~i~~  223 (254)
T 1sby_A          152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGIT-RTPLVHTFN-SW---LDVEPRVAEL---LLSHPTQTSEQCGQNFVK  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSE-ESHHHHSCC-CG---GGSCTTHHHH---HTTSCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCCc-cCccccccc-hh---hhhhHHHHHH---HhcCCCCCHHHHHHHHHH
Confidence            766542     2222334447999999999955 443211000 00   0000000000   011234589999999999


Q ss_pred             hccCcccCCcEEEecCCC
Q 019935          295 ALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~  312 (333)
                      +++. ...|+.|++++|.
T Consensus       224 ~~~~-~~~G~~~~v~gG~  240 (254)
T 1sby_A          224 AIEA-NKNGAIWKLDLGT  240 (254)
T ss_dssp             HHHH-CCTTCEEEEETTE
T ss_pred             HHHc-CCCCCEEEEeCCc
Confidence            9974 4558999999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=4e-25  Score=194.15  Aligned_cols=222  Identities=16%  Similarity=0.107  Sum_probs=150.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ++++|+||||||+|+||++++++|+++|++|++++|+.++........   ...++.++.+|++|+++++ +++      
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~   89 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVT-KTIQQIDAD   89 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHH-HHHHHHHHh
Confidence            456789999999999999999999999999999999765433221111   0457889999999998877 444      


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-----CC-CCeEEEEeccccccCC---CCCccch
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN---ELPWSIM  216 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~~-~~~~v~~SS~~~~~~~---~~~~~~~  216 (333)
                       .++|+||||||......   ...+.....+++|+.++.++++++.     .+ .++||++||..++...   ..+..+.
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  169 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  169 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccc
Confidence             35899999999764211   1111223357889999999999762     23 4799999998875421   1112224


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++......+.+.....         .......+++++|+|++
T Consensus       170 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~  239 (265)
T 1h5q_A          170 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV-NTDQTAHMDKKIRDHQA---------SNIPLNRFAQPEEMTGQ  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCGGGGGSCHHHHHHHH---------HTCTTSSCBCGGGGHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc-ccccccccchhHHHHHH---------hcCcccCCCCHHHHHHH
Confidence            567655532     2222334456999999999955 66643321122111111         11223468899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.++.  ..|+.|++++|
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          240 AILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHhhccCchhcCcCcEEEecCC
Confidence            999998754  45899999987

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.91  E-value=9.5e-25  Score=192.99  Aligned_cols=210  Identities=12%  Similarity=0.095  Sum_probs=146.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------hccC--CCCceEEEEccCCCcCCCchhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-------FGKQ--DEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~--~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.+       ....  .+.++.++.+|++|+++++ +++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~   81 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVR-AAV   81 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHH-HHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH-HHH
Confidence            56789999999999999999999999999999999987542221       1100  1557889999999999887 444


Q ss_pred             -------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCcc
Q 019935          150 -------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       150 -------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                             .++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||...+...  .+.
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~  159 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA--WWG  159 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH--HHH
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC--CCC
Confidence                   48999999999864211   111222346789999999999965    2 356799999999876410  034


Q ss_pred             chhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       215 ~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ....|+.+|.     .+.+...+...|+++++|+||.++..+...        ..          .......+.+++|+|
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~--------~~----------~~~~~~~~~~pedvA  221 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN--------ML----------PGVDAAACRRPEIMA  221 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------------CCCGGGSBCTHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh--------hc----------ccccccccCCHHHHH
Confidence            4556776664     234445566779999999999654433211        00          012233478999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecC
Q 019935          290 EACIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~  310 (333)
                      +++++++++..  ..|+.+ +.+
T Consensus       222 ~~v~~l~s~~~~~itG~~i-~~~  243 (274)
T 3e03_A          222 DAAHAVLTREAAGFHGQFL-IDD  243 (274)
T ss_dssp             HHHHHHHTSCCTTCCSCEE-EHH
T ss_pred             HHHHHHhCccccccCCeEE-EcC
Confidence            99999998754  348877 443

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=5.3e-26  Score=198.87  Aligned_cols=215  Identities=16%  Similarity=0.130  Sum_probs=148.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      |+|++|||||+|+||++++++|+++|  +.|++++|+.++.+.+.+.. +.++.++.+|++|+++++ +++       .+
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   78 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDITEDSVLK-QLVNAAVKGHGK   78 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCTTSHHHHH-HHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCCCCHHHHH-HHHHHHHHhcCC
Confidence            46899999999999999999999985  78999999988776655433 457899999999999887 544       38


Q ss_pred             CcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|+||||||.....    ....+.....+++|+.|++++++++    ++..++||++||..++.    +......|+.+|
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  154 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM----YFSSWGAYGSSK  154 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC----SSCCSHHHHHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc----CCCCcchHHHHH
Confidence            99999999985321    1111222346789999999999976    33227999999998876    555666777666


Q ss_pred             HH--HHHHHHHHh-cCCCEEEEEcccccCCCCCCcch---------HHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          224 YK--KMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDL---------NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       224 ~k--~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..  ..++.+..+ .|+++++|+||.+ .++......         ........         ...+...+.+++|+|++
T Consensus       155 ~a~~~~~~~la~e~~~i~vn~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~r~~~p~dva~~  224 (254)
T 3kzv_A          155 AALNHFAMTLANEERQVKAIAVAPGIV-DTDMQVNIRENVGPSSMSAEQLKMFR---------GLKENNQLLDSSVPATV  224 (254)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEEEECSSC-CCCCSCCCCCCCCTTTSCHHHHHHHH---------HHHTTC----CHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcc-cchhHHHhhcccCccccCHHHHHHHH---------HHHhcCCcCCcccHHHH
Confidence            42  111111122 4899999999955 666532210         11111111         11233468899999999


Q ss_pred             HHHhccCcc---cCCcEEEecCC
Q 019935          292 CIQALDIEF---TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~---~~g~~~~v~~g  311 (333)
                      ++++++++.   ..|+.++++++
T Consensus       225 v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          225 YAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             HHHHHHHCCCGGGTTCEEETTCG
T ss_pred             HHHHHhhcccCCCCccEEEecCc
Confidence            999998763   56999999885

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.91  E-value=1.5e-24  Score=192.78  Aligned_cols=214  Identities=13%  Similarity=0.139  Sum_probs=149.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hhccC--CCCceEEEEccCCCcCCCchhh
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-------LFGKQ--DEETLQVCKGDTRNPKDLDPAI  148 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~--~~~~~~~v~~D~~d~~~~~~~~  148 (333)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.++.+.       .....  .+.++.++.+|++|+++++ ++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~   83 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVA-AA   83 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHH-HH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HH
Confidence            35678999999999999999999999999999999998764221       11111  1457899999999999887 55


Q ss_pred             hc-------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCc
Q 019935          149 FE-------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       149 ~~-------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~  213 (333)
                      ++       ++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||...+...   +
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~  160 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---W  160 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---G
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---C
Confidence            43       8999999999864221   111222345679999999999965    2 245799999998875421   1


Q ss_pred             cchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          214 SIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       214 ~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .....|+.+|.     .+.+...+...|+++++|+||.++..+        +.....        ........+.+++|+
T Consensus       161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~--------~~~~~~--------~~~~~~~r~~~pedv  224 (285)
T 3sc4_A          161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA--------AVQNLL--------GGDEAMARSRKPEVY  224 (285)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH--------HHHHHH--------TSCCCCTTCBCTHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH--------HHHhhc--------cccccccCCCCHHHH
Confidence            34466776664     233445556689999999999543321        111111        112234567899999


Q ss_pred             HHHHHHhccCcc-cCCcEEEecCC
Q 019935          289 AEACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      |++++++++++. ..|+.+.+.+|
T Consensus       225 A~~~~~l~s~~~~~tG~~i~~dgg  248 (285)
T 3sc4_A          225 ADAAYVVLNKPSSYTGNTLLCEDV  248 (285)
T ss_dssp             HHHHHHHHTSCTTCCSCEEEHHHH
T ss_pred             HHHHHHHhCCcccccceEEEEcCc
Confidence            999999999875 45788877664

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.7e-24  Score=188.27  Aligned_cols=203  Identities=16%  Similarity=0.107  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--------  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--------  150 (333)
                      ++|+||||||+|+||++++++|+++|  ++|++++|+.++.+.+.+. ...++.++.+|++|+++++ ++++        
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~-~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLD-TFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHH-HHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHH-HHHHHHHHhcCC
Confidence            46799999999999999999999999  9999999998776655433 2567899999999998887 5554        


Q ss_pred             -CCcEEEEcCCCCC-CCC---CCCCCCCCCcchhHHHHHHHHHhcC-----C------C-----CCeEEEEeccccccCC
Q 019935          151 -GVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S------S-----LKRIVLVSSVGVTKFN  209 (333)
Q Consensus       151 -~~d~vi~~a~~~~-~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-----~------~-----~~~~v~~SS~~~~~~~  209 (333)
                       ++|+||||||... ...   ...+.....+++|+.++.++++++.     .      +     .++||++||..++...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999999764 111   1112223467889999999998762     1      3     6899999999876532


Q ss_pred             C---CCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccc
Q 019935          210 E---LPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIG  281 (333)
Q Consensus       210 ~---~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (333)
                      .   .+..+...|+.+|..     +.+...+...|+++++|+||.+ .++....                        ..
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~------------------------~~  214 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV-QTNLGGK------------------------NA  214 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCce-ecCCCCC------------------------CC
Confidence            1   011344567655542     1222233445999999999955 4432110                        14


Q ss_pred             cccHHHHHHHHHHhccCcc--cCCcEEEecC
Q 019935          282 EVSRIVVAEACIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~  310 (333)
                      +++++|+|+++++++..+.  ..|+.+.+.+
T Consensus       215 ~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  245 (250)
T 1yo6_A          215 ALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             CCCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence            6889999999999998764  4577777766

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.91  E-value=2.8e-24  Score=190.13  Aligned_cols=217  Identities=14%  Similarity=0.108  Sum_probs=151.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhhc---
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      ++++|+||||||+  |+||++++++|+++|++|++++|+.+   ..+.+...  ..++.++.+|++|+++++ ++++   
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~v~-~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFK-SLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEcCCCCHHHHH-HHHHHHH
Confidence            3567899999999  99999999999999999999999875   22233221  124788999999998887 5443   


Q ss_pred             ----CCcEEEEcCCCCCC-----C--CCCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccch
Q 019935          151 ----GVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~-----~--~~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                          ++|+||||||....     +  ....+.....+++|+.+++++++++.. .  .++||++||.+++.    +....
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  155 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK----YMAHY  155 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTC
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC----CCCCc
Confidence                78999999997531     1  111222334678899999999997633 1  36999999988765    34445


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ +++.....  ...+......         ..+...+.+++|+|
T Consensus       156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~---------~~p~~~~~~p~dva  225 (275)
T 2pd4_A          156 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPI-RTLASSGIADFRMILKWNEI---------NAPLRKNVSLEEVG  225 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-CCTTGGGSTTHHHHHHHHHH---------HSTTSSCCCHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc-ccchhhhccccHHHHHHHHh---------cCCcCCCCCHHHHH
Confidence            567766642     3334445567999999999955 66643211  1111111110         11233578999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++....  ..|+.+++++|.
T Consensus       226 ~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          226 NAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCccccCCCCCEEEECCCc
Confidence            99999998643  458999999874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=1.4e-24  Score=187.38  Aligned_cols=192  Identities=17%  Similarity=0.178  Sum_probs=134.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d  153 (333)
                      ++|+||||||+|+||++++++|+++|++|++++|+.++.+.+....  .++.++.+|++|+++++ +++       .++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--EGALPLPGDVREEGDWA-RAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHH-HHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hhceEEEecCCCHHHHH-HHHHHHHHHcCCCC
Confidence            5678999999999999999999999999999999987766554332  27889999999998877 444       3789


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      +||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +......|+.+|..
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~a  156 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----PFKGGAAYNASKFG  156 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----CCTTCHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC----CCCCCchhhHHHHH
Confidence            9999999754211   111222346788999998777643     34678999999998875    44455677766642


Q ss_pred             -----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 -----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 -----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                           +.....+...|+++++|+||.+ .++....        .  ...          ..+++++|+|+++++++.++.
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~--------~--~~~----------~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          157 LLGLAGAAMLDLREANVRVVNVLPGSV-DTGFAGN--------T--PGQ----------AWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCC-cCCcccc--------c--ccc----------cCCCCHHHHHHHHHHHhCCCc
Confidence                 2333445567999999999955 4332110        0  000          116799999999999998764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=8.6e-25  Score=193.70  Aligned_cols=218  Identities=16%  Similarity=0.102  Sum_probs=147.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhc-----
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +++++|+||||||+|+||++++++|+++|++|++++|+.++.+.+.....  +.++.++.+|++|+++++ ++++     
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVE-ETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHH-HHHHHHHHH
Confidence            45678899999999999999999999999999999998765543322111  456889999999998887 5543     


Q ss_pred             --CCcEEEEcCCCCCC-C----CCCCCCCCCCcchhHHHHHHHHH----hcC-CCCCeEEEEeccccccCCCCCccchhh
Q 019935          151 --GVTHVICCTGTTAF-P----SRRWDGDNTPEKVDWEGVRNLVS----ALP-SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       151 --~~d~vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~----a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                        ++|+||||||.... .    ....+.....+++|+.++.++++    +++ .+.++||++||..++...  +..+...
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~  186 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN--IPQLQAP  186 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----CCHHH
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC--CCCCccc
Confidence              59999999997542 1    00011122356789999665554    443 367899999999876421  1344566


Q ss_pred             hHHHHHHHHHHH-------HHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKYKKMGED-------FVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~k~~~e~-------~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|.  .++.       .+...| ++++|+||.+ .++..............         ...+...+++++|+|++
T Consensus       187 Y~~sK~--a~~~~~~~la~e~~~~~-~v~~v~Pg~v-~t~~~~~~~~~~~~~~~---------~~~p~~~~~~~~dvA~~  253 (279)
T 3ctm_A          187 YNTAKA--ACTHLAKSLAIEWAPFA-RVNTISPGYI-DTDITDFASKDMKAKWW---------QLTPLGREGLTQELVGG  253 (279)
T ss_dssp             HHHHHH--HHHHHHHHHHHHTTTTC-EEEEEEECSB-SSTTTSSCCHHHHHHHH---------HHSTTCSCBCGGGTHHH
T ss_pred             HHHHHH--HHHHHHHHHHHHhcccC-CEEEEeccCC-ccccccccChHHHHHHH---------HhCCccCCcCHHHHHHH
Confidence            776553  3332       233457 9999999955 56543321111111111         01123468999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++.++.  ..|+++++++|
T Consensus       254 ~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          254 YLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCccccCccCCEEEECCC
Confidence            999998753  45899999987

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.91  E-value=2.1e-24  Score=188.85  Aligned_cols=207  Identities=12%  Similarity=0.106  Sum_probs=138.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~vi~  157 (333)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.+.          . +.+|++|+++++ +++    .++|+|||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~-~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIA-DVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHH-HHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHH-HHHHHhCCCCCEEEE
Confidence            3689999999999999999999999999999998754321          1 568999988887 655    45699999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCC----------------------
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNE----------------------  210 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~----------------------  210 (333)
                      |||....    ....+..+++|+.+++++++++     +.+.++||++||..++....                      
T Consensus        69 ~Ag~~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (257)
T 1fjh_A           69 CAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVE  144 (257)
T ss_dssp             CCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHH
T ss_pred             CCCCCCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhh
Confidence            9997531    1224558899999999999966     34668999999998872100                      


Q ss_pred             --CCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          211 --LPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       211 --~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                        .+......|+.+|..     +.+...+...|+++++|+||.+ +++........   ... ......+  ......++
T Consensus       145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~---~~~-~~~~~~~--~~~~~~~~  217 (257)
T 1fjh_A          145 HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGAT-ETPLLQAGLQD---PRY-GESIAKF--VPPMGRRA  217 (257)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------C--CCSTTSCC
T ss_pred             cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCC-CCccchhhccc---hhH-HHHHHhc--ccccCCCC
Confidence              133345566655532     2222334457999999999954 55543211000   000 0000000  12334689


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++|+|++++++++.+.  ..|+.+++++|
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            99999999999998763  45899999986

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.91  E-value=1.7e-24  Score=188.64  Aligned_cols=213  Identities=16%  Similarity=0.178  Sum_probs=144.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~d~v  155 (333)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+.... ..++.++.+|++|+++++ +++       .++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIE-EMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCCCCHHHHH-HHHHHHHHhCCCCCEE
Confidence            57999999999999999999999999999999987766554333 357889999999998877 544       378999


Q ss_pred             EEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          156 ICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       156 i~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      |||||....  +  ....+.....+++|+.|++++++++     +.+.++||++||..++.    +......|+.+|.. 
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKaa~  154 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----PYAGGNVYGATKAFV  154 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHHHHH
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc----CCCCCchHHHHHHHH
Confidence            999997521  1  1112223346789999999999866     23668999999998865    44455677766642 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccC-CCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTD-GPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                          +.+...+...|+++++|+||.+ . .+.......   .   ........   .....+++++|+|++++++++++.
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v-~gT~~~~~~~~---~---~~~~~~~~---~~~~~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          155 RQFSLNLRTDLHGTAVRVTDIEPGLV-GGTEFSNVRFK---G---DDGKAEKT---YQNTVALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             HHHHHHHHHHTTTSCCEEEEEEECSB-CC-------------------------------CCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecccc-ccCcchhhccc---C---chHHHHHH---HhccCCCCHHHHHHHHHHHhcCCc
Confidence                2233344556999999999955 5 343211000   0   00000000   011235799999999999998754


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..++.+.+..+
T Consensus       225 ~~~g~~i~v~~~  236 (248)
T 3asu_A          225 HVNINTLEMMPV  236 (248)
T ss_dssp             TCCCCEEEECCT
T ss_pred             cceeeEEEEccc
Confidence             45778888764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-24  Score=188.20  Aligned_cols=206  Identities=14%  Similarity=0.138  Sum_probs=148.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc--
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      +|+||||||+|+||++++++|+++|+       +|++++|+.++.+.+....  ...++.++.+|++|+++++ ++++  
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVR-RLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHH-HHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHH-HHHHHH
Confidence            57899999999999999999999999       9999999987665543221  1456889999999998887 5543  


Q ss_pred             -----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          151 -----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 -----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                           ++|+||||||......   ...+.....+++|+.++.++++++     +.+.++||++||..++.    +.....
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~  156 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----AFRHSS  156 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCH
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC----CCCCCc
Confidence                 7999999999764211   111223346788999999999866     23678999999999876    444556


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|..     +.+..++...|+++++|+||.+ +++......         .        .. ...+++++|+|+++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~~~---------~--------~~-~~~~~~~~dva~~~  217 (244)
T 2bd0_A          157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAV-YTPMWGKVD---------D--------EM-QALMMMPEDIAAPV  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB-CSTTTCCCC---------S--------TT-GGGSBCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCc-cchhhhhcc---------c--------cc-cccCCCHHHHHHHH
Confidence            77766542     2223444567999999999955 666532110         0        00 23689999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++.++.  ..++++...++
T Consensus       218 ~~l~~~~~~~~~g~~~~~~~~  238 (244)
T 2bd0_A          218 VQAYLQPSRTVVEEIILRPTS  238 (244)
T ss_dssp             HHHHTSCTTEEEEEEEEEETT
T ss_pred             HHHHhCCccccchheEEeccc
Confidence            99998754  33666666664

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.91  E-value=2.4e-24  Score=185.46  Aligned_cols=205  Identities=14%  Similarity=0.128  Sum_probs=141.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC----cEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV----THVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~----d~vi~  157 (333)
                      ||+||||||+|+||++++++|+++|++|++++|+.++.+.+.... ..++.++.+|++|+++++ ++++.+    |+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~-~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVE-QLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHH-HHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHH-HHHHHHhhcCCEEEE
Confidence            468999999999999999999999999999999998877765544 567889999999999888 666644    99999


Q ss_pred             cCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-----
Q 019935          158 CTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----  225 (333)
Q Consensus       158 ~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-----  225 (333)
                      |||......   ...+.....+++|+.++.++++++    +....+||++||..++.    +......|+.+|..     
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asKaa~~~~~  154 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ----PKAQESTYCAVKWAVKGLI  154 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS----CCTTCHHHHHHHHHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC----CCCCCchhHHHHHHHHHHH
Confidence            999754211   111222346788999999999866    22223999999998876    44556677766642     


Q ss_pred             HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc---cC
Q 019935          226 KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF---TE  302 (333)
Q Consensus       226 ~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~---~~  302 (333)
                      +.+...+...|+++++|+||.+ .++....                 .........+++++|+|+++++++.++.   ..
T Consensus       155 ~~la~e~~~~gi~v~~v~PG~v-~t~~~~~-----------------~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~it  216 (230)
T 3guy_A          155 ESVRLELKGKPMKIIAVYPGGM-ATEFWET-----------------SGKSLDTSSFMSAEDAALMIHGALANIGNGYVS  216 (230)
T ss_dssp             HHHHHHTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEETTEEEE
T ss_pred             HHHHHHHHhcCeEEEEEECCcc-cChHHHh-----------------cCCCCCcccCCCHHHHHHHHHHHHhCcCCCCcc
Confidence            2333444556999999999955 4332110                 0111234578999999999999998654   22


Q ss_pred             CcEEEecC
Q 019935          303 GEIYEINS  310 (333)
Q Consensus       303 g~~~~v~~  310 (333)
                      |+.+....
T Consensus       217 g~~~~~~~  224 (230)
T 3guy_A          217 DITVNREG  224 (230)
T ss_dssp             EEEEEC--
T ss_pred             ceeecCCC
Confidence            55555544

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.91  E-value=9.4e-25  Score=191.81  Aligned_cols=214  Identities=15%  Similarity=0.145  Sum_probs=142.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhh-------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-------~  150 (333)
                      +++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.....  +.++.++.+|++|+++++ +++       .
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVA-AFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHcC
Confidence            357899999999999999999999999999999999877665433221  456888999999998887 444       4


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|+||||||......   ...+.....+++|+.|++++++++    + .+.++||++||..++.    +......|+.+
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~~~~Y~as  156 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS----VVPTAAVYCAT  156 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc----cCCCChhHHHH
Confidence            8999999999864211   112223346789999999999865    2 3567999999998875    44555677766


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |..     +.+...+  .|+++++|+||.+ .++.......        .......  ......+++++|+|++++++++
T Consensus       157 Kaal~~l~~~la~e~--~gIrvn~v~PG~v-~T~~~~~~~~--------~~~~~~~--~~~~~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          157 KFAVRAISDGLRQES--TNIRVTCVNPGVV-ESELAGTITH--------EETMAAM--DTYRAIALQPADIARAVRQVIE  223 (264)
T ss_dssp             HHHHHHHHHHHHHHC--SSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhC--CCCEEEEEecCCC-cCcccccccc--------hhHHHHH--HhhhccCCCHHHHHHHHHHHhc
Confidence            642     1112222  2999999999955 5543221100        0000000  0011225789999999999999


Q ss_pred             Cccc--CCcEEEecCC
Q 019935          298 IEFT--EGEIYEINSV  311 (333)
Q Consensus       298 ~~~~--~g~~~~v~~g  311 (333)
                      ++..  .+++....++
T Consensus       224 ~~~~~~~~~i~i~p~~  239 (264)
T 3tfo_A          224 APQSVDTTEITIRPTA  239 (264)
T ss_dssp             SCTTEEEEEEEEEECC
T ss_pred             CCccCccceEEEecCc
Confidence            8763  2455544444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.91  E-value=1.5e-24  Score=185.84  Aligned_cols=205  Identities=14%  Similarity=0.058  Sum_probs=141.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTH  154 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~  154 (333)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+                  +|++|+++++ +++   .++|+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~-~~~~~~g~id~   62 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVY-HYFETIGAFDH   62 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHH-HHHHHHCSEEE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHH-HHHHHhCCCCE
Confidence            3456789999999999999999999999999999999753                  7999999888 555   47999


Q ss_pred             EEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccchhhhHHHHHH--
Q 019935          155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (333)
Q Consensus       155 vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k--  225 (333)
                      ||||||......    ...+.....+++|+.+++++++++.. .  .++||++||...+.    +......|+.+|..  
T Consensus        63 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~asK~a~~  138 (223)
T 3uce_A           63 LIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK----VVANTYVKAAINAAIE  138 (223)
T ss_dssp             EEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----CCTTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----CCCCchHHHHHHHHHH
Confidence            999999763111    11122234578899999999997632 1  35899999998876    45556677766642  


Q ss_pred             HHHHHHHHhc-CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCc
Q 019935          226 KMGEDFVQKS-GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGE  304 (333)
Q Consensus       226 ~~~e~~l~~~-gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~  304 (333)
                      ..++.+.++. .+++++|+||.+ +++..............     ..+....+...+.+++|+|++++++++.....|+
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v-~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~tG~  212 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLT-KTEAYKGMNADDRDAMY-----QRTQSHLPVGKVGEASDIAMAYLFAIQNSYMTGT  212 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSB-CSGGGTTSCHHHHHHHH-----HHHHHHSTTCSCBCHHHHHHHHHHHHHCTTCCSC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCC-cchhhhhcchhhHHHHH-----HHHhhcCCCCCccCHHHHHHHHHHHccCCCCCCc
Confidence            1122222222 299999999955 66543221111111000     0011123345788999999999999987666799


Q ss_pred             EEEecCC
Q 019935          305 IYEINSV  311 (333)
Q Consensus       305 ~~~v~~g  311 (333)
                      ++++++|
T Consensus       213 ~i~vdgG  219 (223)
T 3uce_A          213 VIDVDGG  219 (223)
T ss_dssp             EEEESTT
T ss_pred             EEEecCC
Confidence            9999997

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.91  E-value=9.2e-24  Score=182.36  Aligned_cols=206  Identities=15%  Similarity=0.136  Sum_probs=145.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhc-------C
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE-------G  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~-------~  151 (333)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+......   .+.++.++.+|++|+++++ ++++       +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVE-EFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH-HHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHH-HHHHHHHHhcCC
Confidence            579999999999999999999999999999999987765543221   1567899999999998877 5543       7


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +|+||||||......   ...+.....+++|+.+++++++++.    .+.+++|++||.....    +......|+.+|.
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~~sKa  156 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR----LIPYGGGYVSTKW  156 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----CCTTCHHHHHHHH
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc----cCCCcchHHHHHH
Confidence            999999999864221   1122233467899999999999762    2346888888877654    3334456765553


Q ss_pred             HHHHHHH-----HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 KKMGEDF-----VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 k~~~e~~-----l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                        .++.+     +...|+++++|+||.+ .++.....                 ........+++++|+|++++++++++
T Consensus       157 --a~~~~~~~l~~~~~~i~v~~v~PG~v-~T~~~~~~-----------------~~~~~~~~~~~p~dva~~v~~l~~~~  216 (235)
T 3l77_A          157 --AARALVRTFQIENPDVRFFELRPGAV-DTYFGGSK-----------------PGKPKEKGYLKPDEIAEAVRCLLKLP  216 (235)
T ss_dssp             --HHHHHHHHHHHHCTTSEEEEEEECSB-SSSTTTCC-----------------SCCCGGGTCBCHHHHHHHHHHHHTSC
T ss_pred             --HHHHHHHHHhhcCCCeEEEEEeCCcc-cccccccc-----------------CCcccccCCCCHHHHHHHHHHHHcCC
Confidence              33322     2345999999999955 44432210                 01112236889999999999999987


Q ss_pred             c--cCCcEEEecCCC
Q 019935          300 F--TEGEIYEINSVE  312 (333)
Q Consensus       300 ~--~~g~~~~v~~g~  312 (333)
                      .  ..++++...+++
T Consensus       217 ~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          217 KDVRVEELMLRSVYQ  231 (235)
T ss_dssp             TTCCCCEEEECCTTS
T ss_pred             CCCccceEEEeeccc
Confidence            6  346666666653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.90  E-value=1.5e-24  Score=189.56  Aligned_cols=218  Identities=12%  Similarity=0.060  Sum_probs=152.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .+++|++|||||+|+||++++++|+++|++|+++ .|+.++.+......  ...++.++.+|++|.++++ ++++     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~~~~   82 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVE-ALYSSLDNE   82 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHH-HHHHHHHHH
Confidence            3567899999999999999999999999999986 55555444332211  1457888999999988777 4432     


Q ss_pred             --------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccch
Q 019935          151 --------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       151 --------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                              .+|+||||||......   ...+.....+++|+.++.++++++..   ..++||++||..++.    +.+..
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~----~~~~~  158 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----SLPDF  158 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS----CCTTB
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc----CCCCc
Confidence                    3999999999754211   11112234578999999999997643   245899999998876    45556


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHH--HHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNT--LLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|..     +.+...+...|+++++|+||.+ .++........  +....         ........+.+++|+|
T Consensus       159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dva  228 (255)
T 3icc_A          159 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFV-KTDMNAELLSDPMMKQYA---------TTISAFNRLGEVEDIA  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CCSSSTTTTTSHHHHHHH---------HHTSTTSSCBCHHHHH
T ss_pred             chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeee-cccchhhhcccHHHHHhh---------hccCCcCCCCCHHHHH
Confidence            677766642     3334455667999999999955 56543321111  11111         1123345688999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++....  ..|+++++++|
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          229 DTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHhCcccCCccCCEEEecCC
Confidence            99999998654  45999999997

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.90  E-value=7.5e-24  Score=192.98  Aligned_cols=213  Identities=11%  Similarity=0.076  Sum_probs=148.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh-------hhccC--CCCceEEEEccCCCcCCCchh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-------LFGKQ--DEETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------~~~~~--~~~~~~~v~~D~~d~~~~~~~  147 (333)
                      +.++.+|+||||||+|+||++++++|+++|++|++++|+.++.+.       .....  .+.++.++.+|++|+++++ +
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~-~  118 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQIS-A  118 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHH-H
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-H
Confidence            456788999999999999999999999999999999998764221       11100  1457889999999999887 5


Q ss_pred             hh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCC
Q 019935          148 IF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       148 ~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~  212 (333)
                      ++       .++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||...+...  +
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--~  196 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--W  196 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG--G
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC--C
Confidence            54       38999999999864211   111222346789999999999976    3 356799999999876521  1


Q ss_pred             ccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          213 WSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       213 ~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ......|+.+|..     +.+...+. .|+++++|+||.++..+        +....         ........+.+++|
T Consensus       197 ~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~--------~~~~~---------~~~~~~~r~~~ped  258 (346)
T 3kvo_A          197 FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTA--------AMDML---------GGPGIESQCRKVDI  258 (346)
T ss_dssp             TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCH--------HHHHH---------CC--CGGGCBCTHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccH--------HHHhh---------ccccccccCCCHHH
Confidence            3445567766542     33334444 78999999999543321        11111         11223456789999


Q ss_pred             HHHHHHHhccCcc-cCCcEEEecCC
Q 019935          288 VAEACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      +|+++++++++.. ..|+.+ +++|
T Consensus       259 vA~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          259 IADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             HHHHHHHHHhcCCCCCceEE-ECCc
Confidence            9999999998833 457776 7665

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.90  E-value=2.3e-24  Score=191.17  Aligned_cols=207  Identities=15%  Similarity=0.170  Sum_probs=141.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.++.+.......   ...+.++.+|++|+++++ +++      
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~  108 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVA-ALFAAVRAE  108 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHH-HHHHHHHHH
Confidence            4578999999999999999999999999999999999877655432221   233588999999999887 444      


Q ss_pred             -cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc-----CCC--CCeEEEEeccccccCCCCCccchh
Q 019935          150 -EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSS--LKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~--~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                       .++|+||||||......    ...+.....+++|+.|++++++++     +.+  .++||++||..++.    +.....
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~  184 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT----PRPNSA  184 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC----CCTTCH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC----CCCCCh
Confidence             47899999999753211    112223347789999999998865     122  47999999998865    455566


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|.     .+.+..++...|+++++|+||.+ .++....        .. . .............+++++|+|+++
T Consensus       185 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~--------~~-~-~~~~~~~~~~~~~~~~pedvA~~v  253 (281)
T 4dry_A          185 PYTATKHAITGLTKSTALDGRMHDIACGQIDIGNA-ATDMTAR--------MS-T-GVLQANGEVAAEPTIPIEHIAEAV  253 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECB-CC----------------C-EEECTTSCEEECCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcC-cChhhhh--------hc-c-hhhhhhhcccccCCCCHHHHHHHH
Confidence            7776664     23344555678999999999955 5443211        00 0 011111112334688999999999


Q ss_pred             HHhccCccc
Q 019935          293 IQALDIEFT  301 (333)
Q Consensus       293 ~~~l~~~~~  301 (333)
                      +++++++..
T Consensus       254 ~fL~s~~~~  262 (281)
T 4dry_A          254 VYMASLPLS  262 (281)
T ss_dssp             HHHHHSCTT
T ss_pred             HHHhCCCcc
Confidence            999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.90  E-value=6.2e-24  Score=191.78  Aligned_cols=217  Identities=14%  Similarity=0.118  Sum_probs=141.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh---
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF---  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~---  149 (333)
                      +.++.+|+||||||+||||++++++|+++|++|++++|+.++.+......    ...++.++.+|++|+++++ +++   
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~   81 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFK-MAADEV   81 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHH-HHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHH-HHHHHH
Confidence            34567889999999999999999999999999999999987765543221    1237899999999999887 554   


Q ss_pred             ----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-----------CCCeEEEEeccccccCCCC
Q 019935          150 ----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----------SLKRIVLVSSVGVTKFNEL  211 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-----------~~~~~v~~SS~~~~~~~~~  211 (333)
                          .++|+||||||......   ...+.....+++|+.|+.++++++..           +.++||++||.+++.    
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~----  157 (319)
T 3ioy_A           82 EARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL----  157 (319)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC----
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc----
Confidence                37899999999754211   11222334788999999999986621           256899999999876    


Q ss_pred             CccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCC-Ccccccc
Q 019935          212 PWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQG-DKLIGEV  283 (333)
Q Consensus       212 ~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~i  283 (333)
                      +......|+.+|.     .+.+...+...|+++++|+||.+ .++.....  .................... ......+
T Consensus       158 ~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (319)
T 3ioy_A          158 AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLV-KSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGM  236 (319)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCB-C-----------------------------CCGGGSSB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeE-ccCcccccccCchhhcccccchhHHHHHHHHHhhhcCC
Confidence            4445566776664     23333445667999999999955 55543211  00000000000000000111 1111238


Q ss_pred             cHHHHHHHHHHhccCc
Q 019935          284 SRIVVAEACIQALDIE  299 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~  299 (333)
                      +++|+|+.++.+++.+
T Consensus       237 ~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          237 EPDVIGARVIEAMKAN  252 (319)
T ss_dssp             CHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHcC
Confidence            9999999999999875

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.90  E-value=5.1e-24  Score=179.57  Aligned_cols=184  Identities=18%  Similarity=0.183  Sum_probs=133.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc---CCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE---GVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~---~~d~vi~~a  159 (333)
                      |+||||||+|+||++++++|+ +|++|++++|+.+               .+.+|++|+++++ ++++   ++|+|||||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~-~~~~~~~~~d~vi~~a   66 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIK-KMYEQVGKVDAIVSAT   66 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHH-HHHHHHCCEEEEEECC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHH-HHHHHhCCCCEEEECC
Confidence            379999999999999999999 9999999999753               3679999999888 6665   489999999


Q ss_pred             CCCCCCCC---CCCCCCCCcchhHHHHHHHHHhcCCC---CCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHH
Q 019935          160 GTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       160 ~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      |.......   ..+.....+++|+.++.++++++...   .++||++||..++.    +..+...|+.+  |..+|.+.+
T Consensus        67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s--K~~~~~~~~  140 (202)
T 3d7l_A           67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----PIVQGASAAMA--NGAVTAFAK  140 (202)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----CCTTCHHHHHH--HHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----CCCccHHHHHH--HHHHHHHHH
Confidence            97532111   11111235678999999999977431   26999999998765    44455667655  444554443


Q ss_pred             h------cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEE
Q 019935          234 K------SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYE  307 (333)
Q Consensus       234 ~------~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~  307 (333)
                      .      .|+++++||||.+ +++..        .          .++....+++++++|+|++++.++.. ...|++|+
T Consensus       141 ~~~~e~~~gi~v~~v~pg~v-~~~~~--------~----------~~~~~~~~~~~~~~dva~~~~~~~~~-~~~G~~~~  200 (202)
T 3d7l_A          141 SAAIEMPRGIRINTVSPNVL-EESWD--------K----------LEPFFEGFLPVPAAKVARAFEKSVFG-AQTGESYQ  200 (202)
T ss_dssp             HHTTSCSTTCEEEEEEECCB-GGGHH--------H----------HGGGSTTCCCBCHHHHHHHHHHHHHS-CCCSCEEE
T ss_pred             HHHHHccCCeEEEEEecCcc-CCchh--------h----------hhhhccccCCCCHHHHHHHHHHhhhc-cccCceEe
Confidence            2      4899999999955 44321        0          01123346789999999999998843 45588888


Q ss_pred             ec
Q 019935          308 IN  309 (333)
Q Consensus       308 v~  309 (333)
                      ++
T Consensus       201 vd  202 (202)
T 3d7l_A          201 VY  202 (202)
T ss_dssp             EC
T ss_pred             cC
Confidence            74

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=2.2e-24  Score=190.34  Aligned_cols=212  Identities=18%  Similarity=0.182  Sum_probs=142.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhh-------cCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-------EGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~-------~~~d~  154 (333)
                      |++|||||+|+||++++++|+++|++|++++|+.++.+.+..... ..++.++.+|++|+++++ +++       .++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMS-AAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHH-HHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHH-HHHHHHHHHhCCCCE
Confidence            799999999999999999999999999999999877665543221 147889999999988776 444       45799


Q ss_pred             EEEcCCCCCC--C--CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCC-eEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          155 VICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLK-RIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       155 vi~~a~~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      ||||||....  +  ....+.....+++|+.|++++++++     +.+.+ +||++||..++.    +......|+.+|.
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----~~~~~~~Y~asKa  176 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----PYPGSHVYGGTKA  176 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc----CCCCCchHHHHHH
Confidence            9999997531  1  0111223346788999999988865     23567 999999998865    3444556775553


Q ss_pred             HHHHHHH-------HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          225 KKMGEDF-------VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       225 k~~~e~~-------l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                        .++.+       +...|+++++|+||.+ .++........      ........   .....+++++|+|++++++++
T Consensus       177 --a~~~l~~~la~el~~~gIrvn~v~PG~v-~T~~~~~~~~~------~~~~~~~~---~~~~~~~~pedvA~~v~~l~s  244 (272)
T 2nwq_A          177 --FVEQFSLNLRCDLQGTGVRVTNLEPGLC-ESEFSLVRFGG------DQARYDKT---YAGAHPIQPEDIAETIFWIMN  244 (272)
T ss_dssp             --HHHHHHHHHHTTCTTSCCEEEEEEECSB-C-----------------------------CCCCBCHHHHHHHHHHHHT
T ss_pred             --HHHHHHHHHHHHhCccCeEEEEEEcCCC-cCcchhccccc------chHHHHHh---hccCCCCCHHHHHHHHHHHhC
Confidence              33333       2346899999999955 55532210000      00000000   001135799999999999998


Q ss_pred             Ccc-cCCcEEEecCC
Q 019935          298 IEF-TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~-~~g~~~~v~~g  311 (333)
                      ++. ..++.+.+.++
T Consensus       245 ~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          245 QPAHLNINSLEIMPV  259 (272)
T ss_dssp             SCTTEEEEEEEEEET
T ss_pred             CCccCccceEEEeec
Confidence            754 44777888775

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=6.7e-24  Score=187.99  Aligned_cols=211  Identities=20%  Similarity=0.225  Sum_probs=139.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhhc--
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      +.++++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+....    ...++.++.+|++|+++++ ++++  
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~~~~~~  105 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDIL-SMFSAI  105 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHH-HHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHH-HHHHHH
Confidence            34467789999999999999999999999999999999987655443211    1245788999999999887 5554  


Q ss_pred             -----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHH----hcC-CCC--CeEEEEeccccccCCCCCccc
Q 019935          151 -----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVS----ALP-SSL--KRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       151 -----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~----a~~-~~~--~~~v~~SS~~~~~~~~~~~~~  215 (333)
                           ++|+||||||......   ...+.....+++|+.+++++++    +++ .+.  ++||++||..++..  .+..+
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~--~~~~~  183 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV--LPLSV  183 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--CSCGG
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc--CCCCC
Confidence                 8999999999754211   1111223467889999555554    443 354  79999999988632  24455


Q ss_pred             hhhhHHHHHH-----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          216 MNLFGVLKYK-----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       216 ~~~~~~~k~k-----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      ...|+.+|..     +.+...+.  ..|+++++|+||.+ .++..    .   ......... . ........+++++|+
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v-~t~~~----~---~~~~~~~~~-~-~~~~~~~~~~~~~dv  253 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ETQFA----F---KLHDKDPEK-A-AATYEQMKCLKPEDV  253 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB-CSSHH----H---HHTTTCHHH-H-HHHHC---CBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcc-cchhh----h---hhcccChhH-H-hhhcccccCCCHHHH
Confidence            5667766642     22233444  57899999999955 44321    0   000000000 0 000112357899999


Q ss_pred             HHHHHHhccCcc
Q 019935          289 AEACIQALDIEF  300 (333)
Q Consensus       289 a~a~~~~l~~~~  300 (333)
                      |++++++++.+.
T Consensus       254 A~~i~~l~~~~~  265 (279)
T 1xg5_A          254 AEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHSCT
T ss_pred             HHHHHHHhcCCc
Confidence            999999998765

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.90  E-value=1.3e-23  Score=182.61  Aligned_cols=208  Identities=14%  Similarity=0.126  Sum_probs=128.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC---CCch--hhhcCCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDP--AIFEGVT  153 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~---~~~~--~~~~~~d  153 (333)
                      ++++|++|||||+|+||++++++|++ |++|++++|++++.+.+..   ..++.++.+|++|.+   .+.+  +.+.++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            35678999999999999999999988 9999999999887776654   356889999998873   3331  1234799


Q ss_pred             EEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      +||||||......   ...+.....+++|+.++.++++++    +...++||++||..++.    +......|+.+|.. 
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----PHPGNTIYAASKHAL  153 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------CHHHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----CCCCchHHHHHHHHH
Confidence            9999999864211   011122346788999999988865    22237999999998876    45556677766642 


Q ss_pred             ----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          226 ----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       226 ----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                          +.+...+...|+++++|+||.+ .++........             .........+++++|+|++++++++.+..
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~-------------~~~~~~~~~~~~p~dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPT-NTPMLQGLMDS-------------QGTNFRPEIYIEPKEIANAIRFVIDAGET  219 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCc-cCchhhhhhhh-------------hhcccccccCCCHHHHHHHHHHHHcCCCc
Confidence                2333444567999999999954 55432211100             01112234688999999999999988653


Q ss_pred             CCcEEEec
Q 019935          302 EGEIYEIN  309 (333)
Q Consensus       302 ~g~~~~v~  309 (333)
                       +.++++.
T Consensus       220 -~~~~~i~  226 (245)
T 3e9n_A          220 -TQITNVD  226 (245)
T ss_dssp             -EEEEEEE
T ss_pred             -cceeeeE
Confidence             5666664

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=7.4e-24  Score=184.87  Aligned_cols=202  Identities=15%  Similarity=0.080  Sum_probs=142.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------  149 (333)
                      ..+.++|+||||||+|+||++++++|+++|++|++++|+.++..          ...+.+|++|+++++ +++       
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------~~~~~~d~~d~~~v~-~~~~~~~~~~   85 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------DHSFTIKDSGEEEIK-SVIEKINSKS   85 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------SEEEECSCSSHHHHH-HHHHHHHTTT
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------ccceEEEeCCHHHHH-HHHHHHHHHc
Confidence            44567889999999999999999999999999999999876432          134678999988877 444       


Q ss_pred             cCCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      .++|+||||||.....    ....+.....+++|+.++.++++++..   ..++||++||..++.    +......|+.+
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~s  161 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN----RTSGMIAYGAT  161 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHH
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc----CCCCCchhHHH
Confidence            3679999999975421    111222334678899999999997632   125899999998875    44556667766


Q ss_pred             HHHHHHHHHH----H-----hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          223 KYKKMGEDFV----Q-----KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       223 k~k~~~e~~l----~-----~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |.  .++.+.    .     ..|+++++|+||.+ .++.        ....         ........+++++|+|++++
T Consensus       162 Ka--a~~~~~~~la~e~~~~~~gi~v~~v~PG~v-~t~~--------~~~~---------~~~~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          162 KA--ATHHIIKDLASENGGLPAGSTSLGILPVTL-DTPT--------NRKY---------MSDANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             HH--HHHHHHHHHTSTTSSSCTTCEEEEEEESCB-CCHH--------HHHH---------CTTSCGGGSBCHHHHHHHHH
T ss_pred             HH--HHHHHHHHHHHHhcccCCCcEEEEEecCcC-cCcc--------hhhh---------cccccccccCCHHHHHHHHH
Confidence            54  233222    2     46899999999955 3321        1111         11234567899999999999


Q ss_pred             HhccC---cccCCcEEEecCCCC
Q 019935          294 QALDI---EFTEGEIYEINSVEG  313 (333)
Q Consensus       294 ~~l~~---~~~~g~~~~v~~g~~  313 (333)
                      +++.+   ....|+.+++.+|++
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHhcCccccCCcceEEEEecCCc
Confidence            99988   335699999988754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.90  E-value=3.2e-24  Score=186.04  Aligned_cols=201  Identities=14%  Similarity=0.107  Sum_probs=142.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---------c
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---------E  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---------~  150 (333)
                      .++|+||||||+|+||++++++|+++|++|++++|++++..        ....++.+|++|+++++ +++         .
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~-~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQAD-QVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHH-HHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHH-HHHHHHHHHhCCC
Confidence            35689999999999999999999999999999999876532        23567889999998877 444         3


Q ss_pred             CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      ++|+||||||......    ...+.....+++|+.++.++++++..   ..++||++||..++.    +......|+.+|
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  151 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----GTPGMIGYGMAK  151 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHHH
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc----CCCCchHHHHHH
Confidence            7999999999754210    11112234577899999999987632   126999999998875    344555676555


Q ss_pred             HHHHHHHH-------HH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          224 YKKMGEDF-------VQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       224 ~k~~~e~~-------l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .  .++.+       +.  ..|+++++|+||.+ .++        +......         ......+++++|+|+++++
T Consensus       152 ~--a~~~~~~~la~e~~~~~~gi~v~~v~PG~v-~T~--------~~~~~~~---------~~~~~~~~~~~~vA~~v~~  211 (241)
T 1dhr_A          152 G--AVHQLCQSLAGKNSGMPSGAAAIAVLPVTL-DTP--------MNRKSMP---------EADFSSWTPLEFLVETFHD  211 (241)
T ss_dssp             H--HHHHHHHHHTSTTSSCCTTCEEEEEEESCE-ECH--------HHHHHST---------TSCGGGSEEHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHHHhccCCCCeEEEEEecCcc-cCc--------cccccCc---------chhhccCCCHHHHHHHHHH
Confidence            3  33322       23  46799999999955 332        1111110         1123457889999999999


Q ss_pred             hccCcc--cCCcEEEecCCCC
Q 019935          295 ALDIEF--TEGEIYEINSVEG  313 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~~  313 (333)
                      +++...  ..|+.+.+.++.+
T Consensus       212 l~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          212 WITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HHTTTTCCCTTCEEEEEEETT
T ss_pred             HhcCCCcCccceEEEEeCCCC
Confidence            998754  4489999988653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.90  E-value=1.1e-23  Score=185.77  Aligned_cols=223  Identities=14%  Similarity=0.042  Sum_probs=148.7

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhhc-----
Q 019935           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        79 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      .+++|++|||||  +|+||++++++|+++|++|++++|+.++ .+.+.+.. ..++.++.+|++|+++++ ++++     
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~   81 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLA-SLAGRVTEA   81 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHH-HHHHHHHHH
Confidence            456789999999  9999999999999999999999998765 34444333 446888999999999887 5543     


Q ss_pred             -----CCcEEEEcCCCCCC------C--CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCcc
Q 019935          151 -----GVTHVICCTGTTAF------P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       151 -----~~d~vi~~a~~~~~------~--~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                           ++|+||||||....      +  ....+.....+++|+.+++++++++..   ..++||++||...++     ..
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-----~~  156 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-----MP  156 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-----CT
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-----cC
Confidence                 89999999997531      0  011122234578899999999997632   125999999987632     33


Q ss_pred             chhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc-----hHHHHHHhhcccceeecCCCCccc-ccc
Q 019935          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-----LNTLLKATAGERRAVLMGQGDKLI-GEV  283 (333)
Q Consensus       215 ~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~i  283 (333)
                      ....|+.+|.     .+.+...+...|+++++|+||.+ .++.....     .............  .+....+.. .+.
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~rr~~  233 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPI-RTLAMSAIVGGALGEEAGAQIQLLEE--GWDQRAPIGWNMK  233 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-CCHHHHHHHTTTTCHHHHHHHHHHHH--HHHHHCTTCCCTT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcc-cchhhhccccccchhhHHHHHHHHHH--hhhccCCcccCCC
Confidence            3456666654     23334455667999999999955 44321000     0000000000000  000111223 478


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++|+|+++++++++..  ..|+.+.+++|
T Consensus       234 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          234 DATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             CCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence            89999999999998754  45899999986

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.89  E-value=1.4e-23  Score=184.08  Aligned_cols=219  Identities=10%  Similarity=0.062  Sum_probs=141.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh--------h
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI--------F  149 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~--------~  149 (333)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+.......  +.++.++.+|++|+++++ ++        +
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~~   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVR-SLFEQVDREQQ   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHH-HHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHH-HHHHHHHHhcC
Confidence            467899999999999999999999999999999999876654432211  346888999999998876 33        4


Q ss_pred             cCCcEEEEcCCC--C------CCC--CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCcc
Q 019935          150 EGVTHVICCTGT--T------AFP--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       150 ~~~d~vi~~a~~--~------~~~--~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                      .++|+||||||.  .      ..+  ....+.....+++|+.+++++++++     +.+.++||++||...+...     
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  156 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-----  156 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-----
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-----
Confidence            578999999952  1      111  1112222346778999998887754     2356899999999886521     


Q ss_pred             chhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       215 ~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +...|+.+|..     +.+...+...|+++++|+||.+ .++..........  ..........  ......+.+++|+|
T Consensus       157 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~pe~va  231 (260)
T 2qq5_A          157 FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIV-QTELLKEHMAKEE--VLQDPVLKQF--KSAFSSAETTELSG  231 (260)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCS-CTTTC--------------------------CHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCcc-ccHHHHHhhcccc--ccchhHHHHH--HhhhccCCCHHHHH
Confidence            23567766542     3333445567999999999955 5654321111000  0000000000  01122357899999


Q ss_pred             HHHHHhccCcc---cCCcEEEec
Q 019935          290 EACIQALDIEF---TEGEIYEIN  309 (333)
Q Consensus       290 ~a~~~~l~~~~---~~g~~~~v~  309 (333)
                      ++++++++++.   ..|+.+.++
T Consensus       232 ~~v~~l~s~~~~~~itG~~i~~~  254 (260)
T 2qq5_A          232 KCVVALATDPNILSLSGKVLPSC  254 (260)
T ss_dssp             HHHHHHHTCTTGGGGTTCEEEHH
T ss_pred             HHHHHHhcCcccccccceeechh
Confidence            99999998764   246666654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=6.1e-24  Score=187.60  Aligned_cols=199  Identities=14%  Similarity=0.081  Sum_probs=141.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      ..++++|+||||||+|+||++++++|+++|++|++++|++++.+.+....  .+.++.++.+|++|+++++ +++     
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~-~~~~~~~~  104 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIY-SSAKKVKA  104 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHH-HHHHHHHH
Confidence            44567899999999999999999999999999999999987665443221  1457899999999998887 544     


Q ss_pred             --cCCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          150 --EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       150 --~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                        .++|+||||||.......   ..+.....+++|+.++.++++++     +.+.++||++||..++.    +......|
T Consensus       105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  180 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----SVPFLLAY  180 (272)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----CHHHHHHH
T ss_pred             HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----CCCCchhH
Confidence              379999999997642110   11122346788999988888855     24678999999998875    44555667


Q ss_pred             HHHHHH-----HHHHHHHH---hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          220 GVLKYK-----KMGEDFVQ---KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       220 ~~~k~k-----~~~e~~l~---~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +.+|..     +.+...+.   ..|+++++|+||.+ +++....                   .......+++++|+|++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v-~t~~~~~-------------------~~~~~~~~~~~~dva~~  240 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKN-------------------PSTSLGPTLEPEEVVNR  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH-HHCSTTC-------------------THHHHCCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcc-cCCcccc-------------------ccccccCCCCHHHHHHH
Confidence            766542     11222232   34899999999955 4443210                   00123467899999999


Q ss_pred             HHHhccCcc
Q 019935          292 CIQALDIEF  300 (333)
Q Consensus       292 ~~~~l~~~~  300 (333)
                      +++++.++.
T Consensus       241 i~~~~~~~~  249 (272)
T 1yb1_A          241 LMHGILTEQ  249 (272)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHcCC
Confidence            999998753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.89  E-value=4.3e-24  Score=186.68  Aligned_cols=217  Identities=10%  Similarity=0.025  Sum_probs=141.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh-------hcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------FEGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~-------~~~~  152 (333)
                      ||++|||||+|+||++++++|+++|++|++++|+.++.+.... ..  +.++..+     |+++++ ++       +.++
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~-~~~~~~~~~~g~i   73 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPA-ELIEAVTSAYGQV   73 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHH-HHHHHHHHHHSCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHH-HHHHHHHHHhCCC
Confidence            3689999999999999999999999999999998776554322 10  2234333     555555 33       3489


Q ss_pred             cEEEEcCCCC-CCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          153 THVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       153 d~vi~~a~~~-~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      |+||||||.. ....   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK  149 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----PWKELSTYTSAR  149 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----CCTTCHHHHHHH
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc----CCCCchHHHHHH
Confidence            9999999976 2111   111222346788999999999866     23568999999998865    334455677665


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcch-HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 YK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL-NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      ..     +.+...+...|+++++|+||.+ +|+...... ..+....  ......+........+.+++|+|++++++++
T Consensus       150 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~~~~~~~~~~T~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s  226 (254)
T 1zmt_A          150 AGACTLANALSKELGEYNIPVFAIGPNYL-HSEDSPYFYPTEPWKTN--PEHVAHVKKVTALQRLGTQKELGELVAFLAS  226 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSB-CCBTCCSSCBHHHHTTC--HHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcc-ccccccccCCCcccccC--hHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence            42     3333455667999999999955 555432211 1111000  0000000011223457899999999999998


Q ss_pred             Ccc--cCCcEEEecCCC
Q 019935          298 IEF--TEGEIYEINSVE  312 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g~  312 (333)
                      ++.  ..|+.+++++|.
T Consensus       227 ~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          227 GSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             TSCGGGTTCEEEESTTC
T ss_pred             cccCCccCCEEEECCCc
Confidence            754  458999999874

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=4e-24  Score=184.79  Aligned_cols=201  Identities=14%  Similarity=0.098  Sum_probs=139.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---------cC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---------EG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---------~~  151 (333)
                      ++|+||||||+|+||++++++|+++|++|++++|++++..        ....++.+|++|+++++ +++         .+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~-~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQ-SILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHH-HHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHH-HHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999876532        23567889999998877 444         37


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      +|+||||||......    ...+.....+++|+.++.++++++..   ..++||++||..++.    +......|+.+|.
T Consensus        73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----PTPSMIGYGMAKA  148 (236)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHHHH
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----CCCCcHHHHHHHH
Confidence            999999999754211    11122234678899999999986632   135999999998875    4445566776654


Q ss_pred             H-----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc-
Q 019935          225 K-----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL-  296 (333)
Q Consensus       225 k-----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l-  296 (333)
                      .     +.+...+.  ..|+++++|+||.+ +++.        ......         ......+++++|+|+++++++ 
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v-~t~~--------~~~~~~---------~~~~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTL-DTPM--------NRKWMP---------NADHSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCB-CCHH--------HHHHST---------TCCGGGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcc-cCcc--------hhhcCC---------CccccccCCHHHHHHHHHHHHc
Confidence            2     11112223  45799999999955 4432        111110         112345788999999999777 


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      ....  ..|+.+.+.+|.
T Consensus       211 s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          211 ETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             CGGGCCCTTCEEEEEEET
T ss_pred             CCCcccccccEEEEecCC
Confidence            3322  448999998874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.89  E-value=3.9e-24  Score=193.33  Aligned_cols=225  Identities=14%  Similarity=0.150  Sum_probs=140.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-----chhhhhhccC--CCCceEEEEccCCCcCCCchhhhc--
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-----EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-----~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      +++|+||||||+|+||++++++|+++|++|++++|+.     ++.+.+....  .+.++.++.+|++|+++++ ++++  
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~-~~~~~~   81 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVD-RAIDQI   81 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH-HHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH-HHHHHH
Confidence            4568999999999999999999999999999999863     2222222111  1457899999999999888 5554  


Q ss_pred             -----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchh
Q 019935          151 -----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       151 -----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                           ++|+||||||......   ...+.....+++|+.|++++++++    + ++.++||++||++++..   ......
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~---~~~~~~  158 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG---TPPYLA  158 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---CCSSCH
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---CCCcch
Confidence                 8999999999764211   111222346789999999999976    3 36789999999988632   223345


Q ss_pred             hhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCc-------chHHHHHHhhccc--ceeecCC--CCcccc
Q 019935          218 LFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSY-------DLNTLLKATAGER--RAVLMGQ--GDKLIG  281 (333)
Q Consensus       218 ~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~-------~~~~~~~~~~~~~--~~~~~~~--~~~~~~  281 (333)
                      .|+.+|..     +.+...+...|+++++|+||.+ .++....       .............  ....+..  .....+
T Consensus       159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  237 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAF-TSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPP  237 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCcc-ccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCC
Confidence            67766542     3333445567999999999965 4332110       0111100000000  0000000  000012


Q ss_pred             cccHHHHHHHHHHhccCcc-cCCcEEEec
Q 019935          282 EVSRIVVAEACIQALDIEF-TEGEIYEIN  309 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~-~~g~~~~v~  309 (333)
                      ..+++|+|++++.++..+. .....+.++
T Consensus       238 ~~~p~~vA~aiv~~~~~~~~~~~~~~~~g  266 (324)
T 3u9l_A          238 DADVSLVADAIVRVVGTASGKRPFRVHVD  266 (324)
T ss_dssp             TCCTHHHHHHHHHHHTSCTTCCCSEEEEC
T ss_pred             CCCHHHHHHHHHHHhcCCCCCCCeEEEeC
Confidence            3688999999999998874 223445554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.89  E-value=1.3e-23  Score=184.78  Aligned_cols=207  Identities=14%  Similarity=0.070  Sum_probs=143.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhc--
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      ...+++|+||||||+|+||++++++|+++|   ++|++++|+.++.+.+.+.. ...++.++.+|++|+++++ ++++  
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~-~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYD-KLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHH-HHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHH-HHHHHH
Confidence            445678899999999999999999999999   99999999876544322110 0457899999999999988 6655  


Q ss_pred             -------CCcEEEEcCCCCC-CC---CCCCCCCCCCcchhHHHHHHHHHhcCC-----------C-----CCeEEEEecc
Q 019935          151 -------GVTHVICCTGTTA-FP---SRRWDGDNTPEKVDWEGVRNLVSALPS-----------S-----LKRIVLVSSV  203 (333)
Q Consensus       151 -------~~d~vi~~a~~~~-~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-----------~-----~~~~v~~SS~  203 (333)
                             ++|+||||||... ..   ....+.....+++|+.++.++++++..           +     .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                   7999999999754 11   011122234678899999999986621           1     4789999999


Q ss_pred             ccccCCCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCc
Q 019935          204 GVTKFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDK  278 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (333)
                      .++.... +..+...|+.+|..     +.+...+...|+++++|+||.+ .++....                       
T Consensus       175 ~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v-~t~~~~~-----------------------  229 (267)
T 1sny_A          175 LGSIQGN-TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV-KTDMGGS-----------------------  229 (267)
T ss_dssp             GGCSTTC-CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB-CSTTTCT-----------------------
T ss_pred             cccccCC-CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcce-ecCCCCC-----------------------
Confidence            8865321 12244557755542     2222334457999999999955 4433210                       


Q ss_pred             ccccccHHHHHHHHHHhccCcc--cCCcEEEecC
Q 019935          279 LIGEVSRIVVAEACIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       279 ~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~  310 (333)
                       ..+++++|+|+.+++++....  ..|+.+.+.+
T Consensus       230 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g  262 (267)
T 1sny_A          230 -SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDG  262 (267)
T ss_dssp             -TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred             -CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence             146789999999999998643  4577777665

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.89  E-value=1.6e-23  Score=181.99  Aligned_cols=212  Identities=8%  Similarity=-0.024  Sum_probs=141.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-E--cCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-L--RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EG  151 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~--R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~  151 (333)
                      +|++|||||+|+||++++++|+++|++|+++ +  |++++.+.+....  .+.     |+.|+++++ +++       .+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~-----~~~~~~~v~-~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PGT-----IALAEQKPE-RLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTE-----EECCCCCGG-GHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCC-----cccCHHHHH-HHHHHHHHHcCC
Confidence            4789999999999999999999999999999 6  9987766554332  122     333666666 333       47


Q ss_pred             CcEEEEcCCCCCC---CC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          152 VTHVICCTGTTAF---PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       152 ~d~vi~~a~~~~~---~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +|+||||||....   ..   ...+.....+++|+.+++++++++     +.+.++||++||..++.    +......|+
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~  148 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK----PLAYNPLYG  148 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTCTTHH
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC----CCCCchHHH
Confidence            8999999997542   11   111222346788999999999866     23568999999998875    344455677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCC-CCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQ-GDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|.     .+.+...+...|+++++|+||.+ .++.... +..+..    ......+.. ......+.+++|+|+++++
T Consensus       149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~T~~~~~-~~~~~~----~~~~~~~~~~~~p~~r~~~pe~vA~~v~~  222 (244)
T 1zmo_A          149 PARAATVALVESAAKTLSRDGILLYAIGPNFF-NNPTYFP-TSDWEN----NPELRERVDRDVPLGRLGRPDEMGALITF  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CBTTTBC-HHHHHH----CHHHHHHHHHHCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCC-cCCcccc-cccccc----hHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            6654     23334455667999999999955 5554300 011100    000000000 1123457899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+.+.+++|
T Consensus       223 l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          223 LASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHTTTTGGGTTCEEEESTT
T ss_pred             HcCccccCccCCEEEeCCC
Confidence            998754  45899999986

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.89  E-value=1.8e-23  Score=181.91  Aligned_cols=208  Identities=12%  Similarity=0.092  Sum_probs=145.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccC--CCcCCCchhhh---
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDT--RNPKDLDPAIF---  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~--~d~~~~~~~~~---  149 (333)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.++.+......   ...+..++.+|+  +|+++++ +++   
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~-~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYR-ELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHH-HHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHH-HHHHHH
Confidence            3567899999999999999999999999999999999987765543221   135667777777  8877766 433   


Q ss_pred             ----cCCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccch
Q 019935          150 ----EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                          .++|+||||||......    ...+.....+++|+.+++++++++    + .+.++||++||...+.    +....
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~  164 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----GRANW  164 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS----CCTTC
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC----CCCCc
Confidence                48999999999753211    111223346788999999999976    3 3567999999998865    44455


Q ss_pred             hhhHHHHHH-----HHHHHHHHh-cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ..|+.+|..     +.+...+.. .|+++++|+||.+ .++        +.....         .......+.+++|+|+
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v-~t~--------~~~~~~---------~~~~~~~~~~p~dva~  226 (247)
T 3i1j_A          165 GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGAT-RTG--------MRAQAY---------PDENPLNNPAPEDIMP  226 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCC-SSH--------HHHHHS---------TTSCGGGSCCGGGGTH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-cCc--------cchhcc---------cccCccCCCCHHHHHH
Confidence            677766642     223333434 6899999999955 322        111111         1122335678999999


Q ss_pred             HHHHhccCcc--cCCcEEEe
Q 019935          291 ACIQALDIEF--TEGEIYEI  308 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v  308 (333)
                      ++++++.+..  ..|+.+++
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            9999998754  44777765

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.89  E-value=4.8e-23  Score=181.26  Aligned_cols=220  Identities=13%  Similarity=0.042  Sum_probs=151.1

Q ss_pred             CCCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccC---CCCceEEEEccCCCcCCCchhhh--
Q 019935           78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF--  149 (333)
Q Consensus        78 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~--  149 (333)
                      .++++|++|||||+  |+||++++++|+++|++|++++|+..+. ++.....   .+.++.++.+|++|+++++ +++  
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~-~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCE-KLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHH-HHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHH-HHHHH
Confidence            45678999999999  9999999999999999999999876443 2211111   1567889999999998887 444  


Q ss_pred             -----cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccch
Q 019935          150 -----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       150 -----~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                           .++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||...+...  .....
T Consensus        95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~  172 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--FPQEQ  172 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--SSSCC
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC--CCCCC
Confidence                 47899999999764221   111222346788999999999976    2 256799999998875421  11244


Q ss_pred             hhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       217 ~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      ..|+.+|..     +.+...+... +++++|+||.+ .++............         +....+...+.+++|+|++
T Consensus       173 ~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v-~t~~~~~~~~~~~~~---------~~~~~~~~r~~~~~dva~~  241 (267)
T 3gdg_A          173 TSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYI-DTGLSDFVPKETQQL---------WHSMIPMGRDGLAKELKGA  241 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCE-ECSCGGGSCHHHHHH---------HHTTSTTSSCEETHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCcc-ccchhhhCCHHHHHH---------HHhcCCCCCCcCHHHHHhH
Confidence            567766542     2222223333 89999999955 554432211111111         1223455678899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++..  ..|+++++++|
T Consensus       242 ~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          242 YVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             HHHHHSTTCTTCCSCEEEESTT
T ss_pred             hheeecCccccccCCEEEECCc
Confidence            999998744  45999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.88  E-value=1.2e-23  Score=184.31  Aligned_cols=221  Identities=14%  Similarity=0.100  Sum_probs=143.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh--
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF--  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~--  149 (333)
                      ++++|++|||||+|+||++++++|++   +|++|++++|+.++.+.+....    .+.++.++.+|++|+++++ +++  
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~   81 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ-RLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH-HHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH-HHHHH
Confidence            35678999999999999999999999   8999999999987665543322    1346889999999998877 443  


Q ss_pred             -------cCCc--EEEEcCCCCCCCC------CCCCCCCCCcchhHHHHHHHHHhc-----CC--CCCeEEEEecccccc
Q 019935          150 -------EGVT--HVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL-----PS--SLKRIVLVSSVGVTK  207 (333)
Q Consensus       150 -------~~~d--~vi~~a~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~-----~~--~~~~~v~~SS~~~~~  207 (333)
                             .++|  +||||||......      ...+.....+++|+.|++++++++     ++  +.++||++||..++.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence                   2568  9999999753210      111223446788999999999966     22  346899999998875


Q ss_pred             CCCCCccchhhhHHHHHH--HHHHHHHHhc-CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCccccccc
Q 019935          208 FNELPWSIMNLFGVLKYK--KMGEDFVQKS-GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~k--~~~e~~l~~~-gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                          +......|+.+|..  ..++.+..+. ++++++|+||.+ .++.    ...+............+....+...+.+
T Consensus       162 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v-~T~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~  232 (259)
T 1oaa_A          162 ----PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPL-DNDM----QQLARETSKDPELRSKLQKLKSDGALVD  232 (259)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSB-SSHH----HHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCc-Ccch----HHHHhhccCChhHHHHHHHhhhcCCcCC
Confidence                44555667766542  1111111222 499999999955 3321    1111100000000000101112346889


Q ss_pred             HHHHHHHHHHhccCcc-cCCcEEEec
Q 019935          285 RIVVAEACIQALDIEF-TEGEIYEIN  309 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~-~~g~~~~v~  309 (333)
                      ++|+|++++++++... ..|+.+++.
T Consensus       233 p~dvA~~v~~l~~~~~~itG~~i~vd  258 (259)
T 1oaa_A          233 CGTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             HHHHHHHHHHHHhhccccCCcEEecc
Confidence            9999999999997532 447777664

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.88  E-value=6.7e-23  Score=180.69  Aligned_cols=201  Identities=16%  Similarity=0.149  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhc-------
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-------  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-------  150 (333)
                      ++|+||||||+|+||++++++|++ .|++|++++|+.++.+......  .+.++.++.+|++|+++++ ++++       
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIR-ALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHH-HHHHHHHHhcC
Confidence            468999999999999999999999 9999999999976655432221  1356889999999998887 5554       


Q ss_pred             CCcEEEEcCCCCCCCCCC---CCCCCCCcchhHHHHHHHHHhcCC-C--CCeEEEEeccccccC--CC------------
Q 019935          151 GVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKF--NE------------  210 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~--~~------------  210 (333)
                      ++|+||||||........   .+.....+++|+.+++++++++.. .  .++||++||..++..  ..            
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            899999999976422110   012234578899999999997743 2  259999999877631  00            


Q ss_pred             -----------------------CCccchhhhHHHHHH-----HHHHHHHHh----cCCCEEEEEcccccCCCCCCcchH
Q 019935          211 -----------------------LPWSIMNLFGVLKYK-----KMGEDFVQK----SGLPFTIIRAGRLTDGPYTSYDLN  258 (333)
Q Consensus       211 -----------------------~~~~~~~~~~~~k~k-----~~~e~~l~~----~gi~~~~vrpg~~~~g~~~~~~~~  258 (333)
                                             .+..+...|+.+|..     +.+...+..    .|+++++|+||.+ .++....   
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v-~t~~~~~---  237 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDMAGP---  237 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB-CSTTTCT---
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcc-ccCcCCc---
Confidence                                   001123567766532     222233344    6999999999955 4443210   


Q ss_pred             HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc----cCCcEEE
Q 019935          259 TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF----TEGEIYE  307 (333)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~----~~g~~~~  307 (333)
                                           ..+++++|+|+++++++..+.    ..|+.|.
T Consensus       238 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ---------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ---------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ---------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                                 247899999999999998552    3466665

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.87  E-value=4.7e-22  Score=187.23  Aligned_cols=215  Identities=13%  Similarity=0.061  Sum_probs=148.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccCCCCceEEEEccCCCcCCCchhhhc------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE------  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~------  150 (333)
                      .+.++++|||||+|+||++++++|+++|++|++++|+...  ..+...   ..++.++.+|++|+++++ ++++      
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~---~~~~~~~~~Dvtd~~~v~-~~~~~~~~~~  285 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVAD---KVGGTALTLDVTADDAVD-KITAHVTEHH  285 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHH---HHTCEEEECCTTSTTHHH-HHHHHHHHHS
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH---HcCCeEEEEecCCHHHHH-HHHHHHHHHc
Confidence            4578999999999999999999999999999999986532  222221   235678999999999888 5443      


Q ss_pred             -C-CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-C----CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 -G-VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S----SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 -~-~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~----~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       + +|+||||||......   ...+.....+++|+.|+.++.+++. .    +..+||++||...+.    +......|+
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~----g~~g~~~Ya  361 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA----GNRGQTNYA  361 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH----CCTTCHHHH
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC----CCCCCHHHH
Confidence             4 999999999864211   1112223467889999999999762 1    467999999998765    344556777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      .+|.     .+.+..++...|+++++|+||.+ .++.............         ........+.+++|+|++++++
T Consensus       362 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~~---------~~~~~l~r~g~pedvA~~v~fL  431 (454)
T 3u0b_A          362 TTKAGMIGLAEALAPVLADKGITINAVAPGFI-ETKMTEAIPLATREVG---------RRLNSLFQGGQPVDVAELIAYF  431 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECSB-CC----------CHHH---------HHSBTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcc-cChhhhhcchhhHHHH---------HhhccccCCCCHHHHHHHHHHH
Confidence            6664     23444555677999999999955 5554321100000000         0012234567899999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      ++...  ..|++++++||
T Consensus       432 ~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          432 ASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             HCGGGTTCCSCEEEESSS
T ss_pred             hCCccCCCCCcEEEECCc
Confidence            98654  45999999986

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.87  E-value=3.4e-22  Score=177.67  Aligned_cols=198  Identities=15%  Similarity=0.139  Sum_probs=138.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF------  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~------  149 (333)
                      .+.+++||||||+|+||++++++|+++|++|++++|++++.+.+....   ...++.++.+|++|+++++ +++      
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~-~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAE-QFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHH-HHHHHHHHH
Confidence            356789999999999999999999999999999999987765543211   1236889999999988877 444      


Q ss_pred             -cCCcEEEEc-CCCCCCCCC--CCCCCCCCcchhHHHHHHHHHhcC----CCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 -EGVTHVICC-TGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 -~~~d~vi~~-a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                       .++|+|||| ||....+..  ..+.....+++|+.|+.++++++.    .+.++||++||.+++.    +......|+.
T Consensus       104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  179 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----AYPMVAAYSA  179 (286)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS----CCTTCHHHHH
T ss_pred             cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc----CCCCccHHHH
Confidence             389999999 565432111  111223457889999999998662    2347999999998865    4445566776


Q ss_pred             HHHH-----HHHHHHH--HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKYK-----KMGEDFV--QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~k-----~~~e~~l--~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|..     +.+...+  +..|+++++++||.+ .++.        .....         .+.....+++++|+|+.+++
T Consensus       180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v-~t~~--------~~~~~---------~~~~~~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI-DTET--------AMKAV---------SGIVHMQAAPKEECALEIIK  241 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB-CCHH--------HHHHS---------CGGGGGGCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCcc-CChh--------HHHhc---------cccccCCCCCHHHHHHHHHH
Confidence            6642     2222333  456999999999965 3321        11100         01122457899999999999


Q ss_pred             hccCc
Q 019935          295 ALDIE  299 (333)
Q Consensus       295 ~l~~~  299 (333)
                      ++..+
T Consensus       242 ~~~~~  246 (286)
T 1xu9_A          242 GGALR  246 (286)
T ss_dssp             HHHTT
T ss_pred             HHhcC
Confidence            99764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.86  E-value=2.9e-22  Score=180.65  Aligned_cols=207  Identities=14%  Similarity=0.100  Sum_probs=139.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc---------CcchhhhhhccCCCCceEEEEccCCCcCCCchhh-
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---------DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-  148 (333)
                      ++++|++|||||+|+||++++++|+++|++|++++|         +.++.+.....+...+.. +.+|++|.++++ ++ 
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~-~~~   83 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGE-KLV   83 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHH-HHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHH-HHH
Confidence            467899999999999999999999999999999754         444443332211111112 357999988766 33 


Q ss_pred             ------hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCcc
Q 019935          149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       149 ------~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                            +.++|+||||||......   ...+..+..+++|+.|++++++++    + .+.++||++||.....    +..
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~----~~~  159 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----GNF  159 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----CCC
Confidence                  347999999999764221   111223346789999999999866    2 3568999999986543    222


Q ss_pred             chhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       215 ~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ....|+.+|..     +.+...+...|+++++|+||.+  .+......                  ......+++++|+|
T Consensus       160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~--t~~~~~~~------------------~~~~~~~~~p~dvA  219 (319)
T 1gz6_A          160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG--SRMTETVM------------------PEDLVEALKPEYVA  219 (319)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC--STTTGGGS------------------CHHHHHHSCGGGTH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc--cccccccC------------------ChhhhccCCHHHHH
Confidence            34567766542     3333445567999999999954  22211000                  01122357899999


Q ss_pred             HHHHHhccCcc-cCCcEEEecCC
Q 019935          290 EACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      +++++++..+. ..|+.|++++|
T Consensus       220 ~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          220 PLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHhCchhhcCCCEEEECCC
Confidence            99999998754 35888988776

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.85  E-value=4.1e-22  Score=180.41  Aligned_cols=165  Identities=19%  Similarity=0.238  Sum_probs=118.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc--------CCCCceEEEEccCCCcCCCchhhhc---
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK--------QDEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--------~~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      +|+||||||+|+||++++++|+++|++|+++.|+.+..+.....        ....++.++.+|++|+++++ ++++   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~-~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVA-AARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHH-HHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHH-HHHHHHh
Confidence            57899999999999999999999999999988865443322110        11357899999999999888 6655   


Q ss_pred             --CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 --GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                        ++|+||||||......   ...+.....+++|+.+++++++++    + .+.++||++||..++.    +......|+
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~----~~~~~~~Y~  156 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM----GLPFNDVYC  156 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----CCTTCHHHH
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc----CCCCChHHH
Confidence              4899999999753211   111223346789999999999975    2 3678999999998865    333455677


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCC
Q 019935          221 VLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPY  252 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~  252 (333)
                      .+|..     +.+...+...|+++++|+||.+ .++.
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v-~T~~  192 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPV-HTAF  192 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CC--
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcc-cChH
Confidence            66542     3333445568999999999955 5554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.85  E-value=1.9e-20  Score=167.18  Aligned_cols=218  Identities=12%  Similarity=0.046  Sum_probs=139.2

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCc-----------chhhhhhccCCCCc----eEEEEcc----
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQDEET----LQVCKGD----  137 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~~~~~~~~~----~~~v~~D----  137 (333)
                      ++++|++|||||+  |+||++++++|+++|++|++++|++           ++.+... ......    ...+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSR-VLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhh-hhccccccccccccccceecc
Confidence            4567899999999  9999999999999999999998753           1222221 111111    2333333    


Q ss_pred             ----CC----C--------cCCCchhh-------hcCCcEEEEcCCCCCC---C--CCCCCCCCCCcchhHHHHHHHHHh
Q 019935          138 ----TR----N--------PKDLDPAI-------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSA  189 (333)
Q Consensus       138 ----~~----d--------~~~~~~~~-------~~~~d~vi~~a~~~~~---~--~~~~~~~~~~~~~n~~~~~~l~~a  189 (333)
                          +.    |        +++++ ++       +.++|+||||||....   +  ....+.....+++|+.++++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~-~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQ-EAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHH-HHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHH-HHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                22    2        55555 33       3479999999986421   1  111222334678899999999997


Q ss_pred             cCC---CCCeEEEEeccccccCCCCCccch-hhhHHHHH-----HHHHHHHHH-hcCCCEEEEEcccccCCCCCCcc--h
Q 019935          190 LPS---SLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSYD--L  257 (333)
Q Consensus       190 ~~~---~~~~~v~~SS~~~~~~~~~~~~~~-~~~~~~k~-----k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~~--~  257 (333)
                      +..   ..++||++||...+.    +.... ..|+.+|.     .+.+...+. +.|+++++|+||.+ +++.....  .
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v-~T~~~~~~~~~  237 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASER----IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL-GSRAAKAIGFI  237 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTS----CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-BCCCSSCCSHH
T ss_pred             HHHHhccCceEEEEecccccc----CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccc-ccchhhhcccc
Confidence            632   126999999988764    22222 35776664     233334455 37999999999954 67654321  1


Q ss_pred             HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          258 NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ..+......         ......+.+++|+|+++++++....  ..|+.+++++|.
T Consensus       238 ~~~~~~~~~---------~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          238 DTMIEYSYN---------NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHH---------HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhc---------cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            222111111         0122357899999999999998643  358999999873

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.84  E-value=6e-21  Score=171.20  Aligned_cols=194  Identities=21%  Similarity=0.268  Sum_probs=131.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCc-CCCchhh------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNP-KDLDPAI------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~-~~~~~~~------  148 (333)
                      ..++|+||||||+|+||++++++|+++|++|++++|+.++.+.....+   ...++.++.+|++|+ ++++ ++      
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~-~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMS-SLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHH-HHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHH-HHHHHHHH
Confidence            456789999999999999999999999999999999987655432221   135789999999998 6665 33      


Q ss_pred             -hcCCcEEEEcCCCCCCC---------------------------------CCCCCCCCCCcchhHHHHHHHHHhc----
Q 019935          149 -FEGVTHVICCTGTTAFP---------------------------------SRRWDGDNTPEKVDWEGVRNLVSAL----  190 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~---------------------------------~~~~~~~~~~~~~n~~~~~~l~~a~----  190 (333)
                       +.++|+||||||.....                                 ....+..+..+++|+.|++++++++    
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence             34899999999986310                                 0011112234789999999999865    


Q ss_pred             C-CCCCeEEEEeccccccCC--------------------------------------CCCc-cchhhhHHHHHHHHHHH
Q 019935          191 P-SSLKRIVLVSSVGVTKFN--------------------------------------ELPW-SIMNLFGVLKYKKMGED  230 (333)
Q Consensus       191 ~-~~~~~~v~~SS~~~~~~~--------------------------------------~~~~-~~~~~~~~~k~k~~~e~  230 (333)
                      + .+.++||++||..++...                                      ...+ .....|+.+|.  .++.
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~--a~~~  245 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA--CLNA  245 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH--HHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH--HHHH
Confidence            3 356799999998775321                                      0011 12345665553  3332


Q ss_pred             HH----Hh-cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          231 FV----QK-SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       231 ~l----~~-~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      +.    ++ .++++++|+||.+ .++...                        .....++++.|+.+++++..+.
T Consensus       246 ~~~~la~e~~~i~v~~v~PG~v-~T~~~~------------------------~~~~~~~~~~a~~~~~~~~~~~  295 (311)
T 3o26_A          246 YTRVLANKIPKFQVNCVCPGLV-KTEMNY------------------------GIGNYTAEEGAEHVVRIALFPD  295 (311)
T ss_dssp             HHHHHHHHCTTSEEEEECCCSB-CSGGGT------------------------TCCSBCHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHhhcCCceEEEecCCce-ecCCcC------------------------CCCCCCHHHHHHHHHHHHhCCC
Confidence            22    23 2699999999955 333211                        0123578999999999987654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.84  E-value=1.7e-21  Score=190.24  Aligned_cols=209  Identities=14%  Similarity=0.049  Sum_probs=136.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc---------CcchhhhhhccCCCCceEEEEccCCCcCCCchh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---------DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R---------~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~  147 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|         +.+..+...+.+...+.. +.+|++|.++++ +
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~-~   91 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGA-K   91 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHH-H
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHH-H
Confidence            45678899999999999999999999999999999988         444443332222111222 247999987666 4


Q ss_pred             hh-------cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCC
Q 019935          148 IF-------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       148 ~~-------~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~  212 (333)
                      ++       .++|+||||||......   ...+.....+++|+.|++++++++     +++.++||++||.++..    +
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~----~  167 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY----G  167 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH----C
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----C
Confidence            43       47899999999864221   112223346789999999999976     33567999999987754    3


Q ss_pred             ccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       213 ~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ......|+.+|.     .+.+...+...||++++|+||.+ . +......                  .......+.++|
T Consensus       168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t-~~~~~~~------------------~~~~~~~~~ped  227 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-S-RMTEGIL------------------PDILFNELKPKL  227 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------CCCC------------------CHHHHTTCCGGG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-C-hhhhhcc------------------chhhhhcCCHHH
Confidence            344556776664     24444556678999999999943 1 1111000                  112234568999


Q ss_pred             HHHHHHHhccCcc-cCCcEEEecCC
Q 019935          288 VAEACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      +|+++++++.... ..|+++++++|
T Consensus       228 vA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          228 IAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             THHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHhcCCCcCCCceEEEECCC
Confidence            9999999998763 45889998876

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.82  E-value=8.6e-21  Score=171.93  Aligned_cols=225  Identities=11%  Similarity=0.048  Sum_probs=142.1

Q ss_pred             CCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCc---------chhhhhhccC-----CCCceEEEEccCCCc--C-
Q 019935           82 SKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQ-----DEETLQVCKGDTRNP--K-  142 (333)
Q Consensus        82 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~~~~~~~-----~~~~~~~v~~D~~d~--~-  142 (333)
                      +|++|||||++  +||++++++|+++|++|++.+|++         ++.+......     ....+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57999999875  999999999999999999777654         2222211111     123467888999887  6 


Q ss_pred             -----------------CCchhh-------hcCCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcCC-
Q 019935          143 -----------------DLDPAI-------FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALPS-  192 (333)
Q Consensus       143 -----------------~~~~~~-------~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~-  192 (333)
                                       +++ ++       +.++|+||||||......     ...+.....+++|+.|++++++++.. 
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~-~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIE-DVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHH-HHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhcccccccccCHHHHH-HHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                             555 33       347999999999742111     11222344688999999999996622 


Q ss_pred             C--CCeEEEEeccccccCCCCCccchh-hhHHHHH-----HHHHHHHHHh-cCCCEEEEEcccccCCCCCCcchH-----
Q 019935          193 S--LKRIVLVSSVGVTKFNELPWSIMN-LFGVLKY-----KKMGEDFVQK-SGLPFTIIRAGRLTDGPYTSYDLN-----  258 (333)
Q Consensus       193 ~--~~~~v~~SS~~~~~~~~~~~~~~~-~~~~~k~-----k~~~e~~l~~-~gi~~~~vrpg~~~~g~~~~~~~~-----  258 (333)
                      .  .++||++||...+.    +..... .|+.+|.     .+.+...+.. .|+++++|.||.+ ..+.......     
T Consensus       161 m~~~g~Iv~isS~~~~~----~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v-~T~~~~~~~~~~~~~  235 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQK----VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL-KSRAATAINKLNNTY  235 (329)
T ss_dssp             EEEEEEEEEEECGGGTS----CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-CCHHHHTCC------
T ss_pred             HhhCCeEEEEeCccccC----CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEeccee-echhHhhhhhhcccc
Confidence            1  16999999998765    333332 5666664     3455566666 8999999999955 4332110000     


Q ss_pred             ---------H---HHH-Hhhc-ccc-----------------eeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcE
Q 019935          259 ---------T---LLK-ATAG-ERR-----------------AVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEI  305 (333)
Q Consensus       259 ---------~---~~~-~~~~-~~~-----------------~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~  305 (333)
                               .   ... .... ...                 ...+....+...+..++|+|+++++++++..  ..|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~  315 (329)
T 3lt0_A          236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             ------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             cccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcE
Confidence                     0   000 0000 000                 0000011233467899999999999998654  55999


Q ss_pred             EEecCCC
Q 019935          306 YEINSVE  312 (333)
Q Consensus       306 ~~v~~g~  312 (333)
                      +.++||-
T Consensus       316 i~vdGG~  322 (329)
T 3lt0_A          316 IYVDNGL  322 (329)
T ss_dssp             EEESTTG
T ss_pred             EEEcCCe
Confidence            9999974

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.82  E-value=4.9e-20  Score=174.99  Aligned_cols=202  Identities=20%  Similarity=0.154  Sum_probs=137.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcch---hhhhhccC--CCCceEEEEccCCCcCCCchhhhcC--
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEG--  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~--  151 (333)
                      ..++++|||||+|+||++++++|+++|++ |++++|+...   .+++....  .+.++.++.+|++|++++. ++++.  
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~-~~~~~i~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVR-ELLGGIG  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHTSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH-HHHHHHH
Confidence            35689999999999999999999999985 9999998642   12221111  1557889999999999888 66654  


Q ss_pred             ----CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 ----VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ----~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                          +|+||||||......   ...+.....+++|+.|+.+++++++. +.++||++||.+++.    +......|+.+|
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~----g~~g~~~Yaaak  378 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF----GAPGLGGYAPGN  378 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----CCTTCTTTHHHH
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC----CCCCCHHHHHHH
Confidence                599999999764211   11122234677899999999998855 789999999987643    223345677655


Q ss_pred             HH-HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          224 YK-KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       224 ~k-~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .- .....+++..|+++++|+||.+ ++...   ....        ....+.  .....+++++|+++++..++..+.
T Consensus       379 a~l~~la~~~~~~gi~v~~i~pG~~-~~~gm---~~~~--------~~~~~~--~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          379 AYLDGLAQQRRSDGLPATAVAWGTW-AGSGM---AEGP--------VADRFR--RHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCB-C-----------------------CT--TTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCCeEEEEECCee-CCCcc---cchh--------HHHHHH--hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            42 2223455678999999999965 33311   0000        000010  112367999999999999998753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.82  E-value=2.3e-19  Score=171.14  Aligned_cols=201  Identities=17%  Similarity=0.123  Sum_probs=138.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---hhhhhccC--CCCceEEEEccCCCcCCCchhhhcC--C
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEG--V  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~--~  152 (333)
                      .+++||||||+|+||++++++|+++|+ +|++++|+...   .+++....  .+.+++++.+|++|+++++ ++++.  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~-~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALA-ALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHH-HHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH-HHHhcCCC
Confidence            468999999999999999999999998 58889998642   22221111  1456889999999999998 77764  9


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCCCCCccchhhhHHHHHH-H
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-K  226 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-~  226 (333)
                      |+||||||......   ...+.....+++|+.|+.++.++++.  +.++||++||.....    +......|+.+|.. .
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~----g~~g~~~YaaaKa~ld  412 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW----GNAGQGAYAAANAALD  412 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT----CCTTBHHHHHHHHHHH
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC----CCCCCHHHHHHHHHHH
Confidence            99999999864211   11112233567899999999998754  678999999986643    22344567755542 1


Q ss_pred             HHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      ...+.++..|+++++|+||.+..+..... ..  ...+.           .....+++++|+++++..++..+.
T Consensus       413 ~la~~~~~~gi~v~sv~pG~~~~tgm~~~-~~--~~~~~-----------~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          413 ALAERRRAAGLPATSVAWGLWGGGGMAAG-AG--EESLS-----------RRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             HHHHHHHTTTCCCEEEEECCBCSTTCCCC-HH--HHHHH-----------HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCcEEEEECCcccCCccccc-cc--HHHHH-----------hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            12234467799999999996533333221 11  01110           011357899999999999998753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.81  E-value=1e-19  Score=163.88  Aligned_cols=223  Identities=14%  Similarity=0.045  Sum_probs=136.6

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCc-----------chhhhhhccCCCC---ceEEEEcc-----
Q 019935           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQDEE---TLQVCKGD-----  137 (333)
Q Consensus        79 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~~~~~~~~~---~~~~v~~D-----  137 (333)
                      ++++|++|||||  +|+||++++++|+++|++|++++|++           .+.+...+...+.   .+.++.+|     
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            356789999999  89999999999999999999998753           1112121110011   12344443     


Q ss_pred             -------CCC--------cCCCchhh-------hcCCcEEEEcCCCCCC---C--CCCCCCCCCCcchhHHHHHHHHHhc
Q 019935          138 -------TRN--------PKDLDPAI-------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       138 -------~~d--------~~~~~~~~-------~~~~d~vi~~a~~~~~---~--~~~~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                             ++|        +++++ ++       +.++|+||||||....   +  ....+.....+++|+.+++++++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~-~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIK-EVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHH-HHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cchhhhhhhcccccccCCHHHHH-HHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                   332        44555 33       3479999999996421   1  1111223346788999999999976


Q ss_pred             CCC---CCeEEEEeccccccCCCCCccch-hhhHHHHH-----HHHHHHHHH-hcCCCEEEEEcccccCCCCCCcch---
Q 019935          191 PSS---LKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSYDL---  257 (333)
Q Consensus       191 ~~~---~~~~v~~SS~~~~~~~~~~~~~~-~~~~~~k~-----k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~~~---  257 (333)
                      ...   .++||++||...+.    +.... ..|+.+|.     .+.+...+. ..|+++++|+||.+ .++......   
T Consensus       165 ~~~m~~~g~Iv~isS~~~~~----~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v-~T~~~~~~~~~~  239 (315)
T 2o2s_A          165 GPIMNEGGSAVTLSYLAAER----VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL-KSRAASAIGKSG  239 (315)
T ss_dssp             STTEEEEEEEEEEEEGGGTS----CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCC-CCHHHHHTTCSS
T ss_pred             HHHHhcCCEEEEEecccccc----cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccc-cchhhhhccccc
Confidence            331   26999999998764    22222 35776664     234444555 38999999999955 433110000   


Q ss_pred             -HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          258 -NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       258 -~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                       ..+......     .+....+...+.+++|+|+++++++....  ..|+.+.+++|.
T Consensus       240 ~~~~~~~~~~-----~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          240 EKSFIDYAID-----YSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             SSCHHHHHHH-----HHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cchhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence             000000000     00001123457899999999999998644  458999999874

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.81  E-value=6e-20  Score=165.68  Aligned_cols=227  Identities=13%  Similarity=0.020  Sum_probs=123.2

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEEcCc-----------chhhh-----------hhccCCCC-----
Q 019935           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP-----------EKATT-----------LFGKQDEE-----  129 (333)
Q Consensus        79 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~R~~-----------~~~~~-----------~~~~~~~~-----  129 (333)
                      ++.+|++|||||  +|+||+++++.|+++|++|++++|++           ++.+.           +.+.+...     
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            356789999999  89999999999999999999998753           11111           11111000     


Q ss_pred             ceEEEEccC------------CC--------cCCCchhh-------hcCCcEEEEcCCCCC---CC--CCCCCCCCCCcc
Q 019935          130 TLQVCKGDT------------RN--------PKDLDPAI-------FEGVTHVICCTGTTA---FP--SRRWDGDNTPEK  177 (333)
Q Consensus       130 ~~~~v~~D~------------~d--------~~~~~~~~-------~~~~d~vi~~a~~~~---~~--~~~~~~~~~~~~  177 (333)
                      ...++.+|+            +|        +++++ ++       +.++|+||||||...   .+  ....+.....++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~-~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTIS-EVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHH-HHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHH-HHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            124444432            22        33555 33       347999999999642   11  111122334678


Q ss_pred             hhHHHHHHHHHhcCC-C--CCeEEEEeccccccCCCCCccch-hhhHHHHH-----HHHHHHHHHh-cCCCEEEEEcccc
Q 019935          178 VDWEGVRNLVSALPS-S--LKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIIRAGRL  247 (333)
Q Consensus       178 ~n~~~~~~l~~a~~~-~--~~~~v~~SS~~~~~~~~~~~~~~-~~~~~~k~-----k~~~e~~l~~-~gi~~~~vrpg~~  247 (333)
                      +|+.+++++++++.. .  .++||++||...+.    +.... ..|+.+|.     .+.+...+.. .||++++|+||.+
T Consensus       165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEK----VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhhHHHHHHHHHHHHHHhcCceEEEEecccccc----ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            899999999997632 1  26999999998764    22222 35666653     3444455554 8999999999955


Q ss_pred             cCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          248 TDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       248 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                       .++.............. ......+....+...+.+++|+|+++++++....  ..|+.+.+++|.
T Consensus       241 -~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          241 -KSRAASAIGKAGDKTFI-DLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             -C--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             -cChhhhhcccccchhhH-HHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence             55432210000000000 0000001111233467899999999999998744  458999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=6.1e-20  Score=178.59  Aligned_cols=208  Identities=15%  Similarity=0.064  Sum_probs=139.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---------chhhhhhccCCCCceEEEEccCCCcCCCch---
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQDEETLQVCKGDTRNPKDLDP---  146 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---------~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---  146 (333)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.         +..+...+++...+... .+|+.|.+++++   
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVE   83 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHH
Confidence            45678999999999999999999999999999998764         33333322111112222 358887766551   


Q ss_pred             ---hhhcCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccc
Q 019935          147 ---AIFEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       147 ---~~~~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                         +.+.++|+||||||+....   ....+.....+++|+.|++++++++     +++-++||++||.....    +...
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~----~~~~  159 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY----GNFG  159 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTT
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC----CCCC
Confidence               2345899999999975421   1112223447889999999999966     22457999999987754    2334


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ...|+.+|.     .+.+..++..+||++++|.|| + ..+        +.....          .........++|+|.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~-~T~--------m~~~~~----------~~~~~~~~~pe~vA~  219 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-A-RSR--------MTESIM----------PPPMLEKLGPEKVAP  219 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-C-CCH--------HHHTTS----------CHHHHTTCSHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-C-cCc--------cccccC----------ChhhhccCCHHHHHH
Confidence            456776664     456667778889999999997 4 211        111000          001123468999999


Q ss_pred             HHHHhccCcc-cCCcEEEecCC
Q 019935          291 ACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      ++++++.... ..|+++.+++|
T Consensus       220 ~v~~L~s~~~~itG~~~~vdgG  241 (604)
T 2et6_A          220 LVLYLSSAENELTGQFFEVAAG  241 (604)
T ss_dssp             HHHHHTSSSCCCCSCEEEEETT
T ss_pred             HHHHHhCCcccCCCCEEEECCC
Confidence            9999998753 34889998886

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.80  E-value=1.1e-19  Score=176.78  Aligned_cols=207  Identities=14%  Similarity=0.065  Sum_probs=142.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chh-hhhhccCCCCceEEEEccC-CCcCCCch---hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKA-TTLFGKQDEETLQVCKGDT-RNPKDLDP---AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~-~~~~~~~~~~~~~~v~~D~-~d~~~~~~---~~~~~~  152 (333)
                      ++++|+++||||+++||+++++.|+++|++|++.+|.. ++. +++...  +.++..+.+|+ .+.+.+-+   +.+.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA--GGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhc--CCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            56789999999999999999999999999999988642 221 222211  34567778888 55433221   235689


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |+||||||.....   ....+.....+++|+.|++++++++     +++-++||++||.+...    +......|+.+|.
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~----~~~~~~~Y~asKa  472 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY----GNFGQANYSSSKA  472 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----CCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----CCCCChhHHHHHH
Confidence            9999999986421   1112223447889999999999865     23457999999987754    2334456776664


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                           .+.+..++..+||++++|.|| + ..+....    ..     .         ........++|+|.+++++++..
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG-~-~T~m~~~----~~-----~---------~~~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPH-A-ETAMTLS----IM-----R---------EQDKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC-C-CCCC---------------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCC-C-CCccccc----cC-----c---------hhhccCCCHHHHHHHHHHHhCCc
Confidence                 455666778889999999999 4 3333211    00     0         01123468999999999999864


Q ss_pred             c-cCCcEEEecCC
Q 019935          300 F-TEGEIYEINSV  311 (333)
Q Consensus       300 ~-~~g~~~~v~~g  311 (333)
                      . ..|+++.+++|
T Consensus       533 ~~itG~~~~vdGG  545 (604)
T 2et6_A          533 VPVTGETFEIGGG  545 (604)
T ss_dssp             CCCCSCEEEEETT
T ss_pred             cCCCCcEEEECCC
Confidence            4 56899999887

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.77  E-value=8.5e-19  Score=166.11  Aligned_cols=203  Identities=17%  Similarity=0.111  Sum_probs=137.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---hhhhhccC--CCCceEEEEccCCCcCCCchhhhc---
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE---  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~---  150 (333)
                      .+++++|||||+|+||++++++|+++|+ +|+++.|+...   .+++....  .+.++.++.+|++|++++. ++++   
T Consensus       237 ~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~-~~~~~i~  315 (496)
T 3mje_A          237 PVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALA-ALLAELP  315 (496)
T ss_dssp             CCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHTCC
T ss_pred             CCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHH-HHHHHHH
Confidence            3458999999999999999999999998 78888886432   22221111  1567899999999998887 5554   


Q ss_pred             ---CCcEEEEcCCCC-CCC---CCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 ---GVTHVICCTGTT-AFP---SRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ---~~d~vi~~a~~~-~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                         ++|+||||||.. ...   ....+.....+++|+.|+.++.++++. +.++||++||++...    +......|+.+
T Consensus       316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~----g~~g~~~YaAa  391 (496)
T 3mje_A          316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW----GSGGQPGYAAA  391 (496)
T ss_dssp             TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----TCTTCHHHHHH
T ss_pred             HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC----CCCCcHHHHHH
Confidence               589999999986 211   111122234678899999999998754 778999999987754    33445667766


Q ss_pred             HHH-HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          223 KYK-KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       223 k~k-~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      |.- ....+.++..|+++++|+||.+ .+...... ......+.           ..-...+++++.++++..++..+.
T Consensus       392 Ka~ldala~~~~~~Gi~v~sV~pG~w-~~~gm~~~-~~~~~~l~-----------~~g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          392 NAYLDALAEHRRSLGLTASSVAWGTW-GEVGMATD-PEVHDRLV-----------RQGVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEEECEE-SSSCC-------CHHHH-----------HTTEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCeEEEEECCcc-cCCccccC-hHHHHHHH-----------hcCCCCCCHHHHHHHHHHHHcCCC
Confidence            642 2233456778999999999955 33221100 00000000           001234688999999999998753

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.75  E-value=9.5e-19  Score=160.65  Aligned_cols=202  Identities=13%  Similarity=0.018  Sum_probs=129.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhhh---------------hhccCCCCceEEEEccCCCcCCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATT---------------LFGKQDEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~~---------------~~~~~~~~~~~~v~~D~~d~~~~  144 (333)
                      .+|++|||||+++||+++++.|++ .|++|++++|+.+..+.               .... .+..+..+.+|++|++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHHHH
Confidence            478999999999999999999999 99999999997654321               1111 155688899999999877


Q ss_pred             ch------hhh-cCCcEEEEcCCCCC-----------CCCCCC--------------------------CCCCCCcchhH
Q 019935          145 DP------AIF-EGVTHVICCTGTTA-----------FPSRRW--------------------------DGDNTPEKVDW  180 (333)
Q Consensus       145 ~~------~~~-~~~d~vi~~a~~~~-----------~~~~~~--------------------------~~~~~~~~~n~  180 (333)
                      ++      +.+ .++|+||||||...           ......                          +.....+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            62      335 67999999998620           000000                          00011233444


Q ss_pred             HHHH-HHHHhc-CC----CCCeEEEEeccccccCCCCCccch--hhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccc
Q 019935          181 EGVR-NLVSAL-PS----SLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       181 ~~~~-~l~~a~-~~----~~~~~v~~SS~~~~~~~~~~~~~~--~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                      .+.+ .+++++ ..    +.++||++||++...    +.+..  ..|+.+|.     .+.+...+...||++++|.||.+
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~----~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i  294 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEI----TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSV  294 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG----GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc----cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCC
Confidence            4444 555543 22    225899999998754    33333  55666653     35566677788999999999955


Q ss_pred             cCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          248 TDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       248 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                       ..+.....  .+.....+.           .....+..++|+|+++.+++.+.
T Consensus       295 -~T~~~~~ip~~~~~~~~~~-----------~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          295 -VTQASAAIPVMPLYISMVY-----------KIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             -CCTTGGGSTHHHHHHHHHH-----------HHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             -cChhhhcCCCChHHHHHHH-----------hhhcCCcChHHHHHHHHHHhcch
Confidence             55554321  111111110           12334556679999999999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.75  E-value=2.8e-18  Score=164.25  Aligned_cols=200  Identities=13%  Similarity=0.014  Sum_probs=134.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEE-EcCc-------------chhhhhhccC--CCCceEEEEccCCCcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLL-LRDP-------------EKATTLFGKQ--DEETLQVCKGDTRNPK  142 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~-~R~~-------------~~~~~~~~~~--~~~~~~~v~~D~~d~~  142 (333)
                      ..++++|||||+|+||.+++++|+++|++ |+++ .|+.             +..+++....  .+.++.++.+|++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            35689999999999999999999999988 5555 7874             2222221111  1567899999999999


Q ss_pred             CCchhhhc------CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-CC-----CCeEEEEecccccc
Q 019935          143 DLDPAIFE------GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SS-----LKRIVLVSSVGVTK  207 (333)
Q Consensus       143 ~~~~~~~~------~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~~-----~~~~v~~SS~~~~~  207 (333)
                      +++ ++++      .+|+||||||......   ...+.....+++|+.|+.++.+++. ..     .++||++||++++.
T Consensus       329 ~v~-~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          329 AAA-RLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHH-HHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHH-HHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            888 5554      5799999999864211   1112233467889999999999762 22     78999999998864


Q ss_pred             CCCCCccchhhhHHHHHHHHHHHH---HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCccccccc
Q 019935          208 FNELPWSIMNLFGVLKYKKMGEDF---VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~k~~~e~~---l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                          +......|+.+|.  .++.+   ++..|+++++|.||.+ .+.....  ......+.           ..-...++
T Consensus       408 ----g~~g~~~YaaaKa--~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~--~~~~~~~~-----------~~g~~~l~  467 (525)
T 3qp9_A          408 ----GGAGQGAYAAGTA--FLDALAGQHRADGPTVTSVAWSPW-EGSRVTE--GATGERLR-----------RLGLRPLA  467 (525)
T ss_dssp             ----CCTTCHHHHHHHH--HHHHHHTSCCSSCCEEEEEEECCB-TTSGGGS--SHHHHHHH-----------HTTBCCBC
T ss_pred             ----CCCCCHHHHHHHH--HHHHHHHHHHhCCCCEEEEECCcc-ccccccc--hhhHHHHH-----------hcCCCCCC
Confidence                3344556775554  34433   3456999999999965 4333210  00111110           01124688


Q ss_pred             HHHHHHHHHHhccCcc
Q 019935          285 RIVVAEACIQALDIEF  300 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~  300 (333)
                      ++++++++..++..+.
T Consensus       468 pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          468 PATALTALDTALGHGD  483 (525)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999998753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.72  E-value=2.1e-18  Score=156.99  Aligned_cols=213  Identities=12%  Similarity=0.015  Sum_probs=135.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCcchhh---------------hhhccCCCCceEEEEccCCCcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKAT---------------TLFGKQDEETLQVCKGDTRNPKD  143 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~~~~---------------~~~~~~~~~~~~~v~~D~~d~~~  143 (333)
                      ..+|++|||||+++||+++++.|++ .|++|++++|+.+...               ..... .+..+..+.+|++|+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHHH
Confidence            4578999999999999999999999 9999999988754321               11111 15567889999999988


Q ss_pred             Cch------hhhcCCcEEEEcCCCCC-------------C-CC-----------------------CCCCCCCCCcchhH
Q 019935          144 LDP------AIFEGVTHVICCTGTTA-------------F-PS-----------------------RRWDGDNTPEKVDW  180 (333)
Q Consensus       144 ~~~------~~~~~~d~vi~~a~~~~-------------~-~~-----------------------~~~~~~~~~~~~n~  180 (333)
                      +++      +.+.++|+||||||...             . +.                       ...++....+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            772      22457999999999741             0 00                       00011112345566


Q ss_pred             HHHH-HHHHhc-C----CCCCeEEEEeccccccCCCCCccch--hhhHHHHH-----HHHHHHHHHhc-CCCEEEEEccc
Q 019935          181 EGVR-NLVSAL-P----SSLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQKS-GLPFTIIRAGR  246 (333)
Q Consensus       181 ~~~~-~l~~a~-~----~~~~~~v~~SS~~~~~~~~~~~~~~--~~~~~~k~-----k~~~e~~l~~~-gi~~~~vrpg~  246 (333)
                      .+.+ .+++++ .    +...++|++||++...    +++..  ..|+.+|.     .+.+...+... |+++++|.||.
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~----~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~  279 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI----THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKA  279 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG----GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCC
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC----cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCC
Confidence            6655 555543 1    1226899999998754    22222  55666653     45666777888 99999999995


Q ss_pred             ccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          247 LTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       247 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      + ..+....  ..+.....+.           .....+..++|+++++.+++++ ..++....+++
T Consensus       280 i-~T~~s~~ip~~p~y~~~l~-----------~~mkr~G~~Ed~a~~i~~L~sd-~l~~~~~~~D~  332 (405)
T 3zu3_A          280 V-VSQASSAIPMMPLYLSLLF-----------KVMKEKGTHEGCIEQVYSLYKD-SLCGDSPHMDQ  332 (405)
T ss_dssp             C-CCHHHHTSTTHHHHHHHHH-----------HHHHHHTCCCCHHHHHHHHHHH-TTSSSCCCBCT
T ss_pred             C-cCchhhcCCCCcHHHHHHH-----------HHHhcCCCcHHHHHHHHHHHhc-cccCCCCCcCC
Confidence            5 3332111  0111111110           1234566677999999999987 33344444444

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.67  E-value=2.3e-16  Score=165.59  Aligned_cols=210  Identities=13%  Similarity=0.070  Sum_probs=136.5

Q ss_pred             CCCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEEE-cCcchhhh----hhccCC--CCceEEEEccCCCcCCCchhhh-
Q 019935           79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLL-RDPEKATT----LFGKQD--EETLQVCKGDTRNPKDLDPAIF-  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~-R~~~~~~~----~~~~~~--~~~~~~v~~D~~d~~~~~~~~~-  149 (333)
                      +++++++|||||+|+ ||++++++|+++|++|++++ |+.++...    +.....  +.++.++.+|++|.++++ +++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~-alv~  727 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVE-ALVN  727 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHH-HHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHH-HHHH
Confidence            467899999999999 99999999999999999985 55544322    211111  456888999999998887 443 


Q ss_pred             ---------c-CCcEEEEcCCCCCCC--CCCC----CCCCCCcchhHHHHHHHHHhc------CC-CCCeEEEEeccccc
Q 019935          150 ---------E-GVTHVICCTGTTAFP--SRRW----DGDNTPEKVDWEGVRNLVSAL------PS-SLKRIVLVSSVGVT  206 (333)
Q Consensus       150 ---------~-~~d~vi~~a~~~~~~--~~~~----~~~~~~~~~n~~~~~~l~~a~------~~-~~~~~v~~SS~~~~  206 (333)
                               . ++|+||||||.....  ....    +.....+++|+.+++++++++      +. +.++||++||..+.
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                     3 699999999976421  1111    122446789999999888652      11 33699999998775


Q ss_pred             cCCCCCccchhhhHHHHHHH--HHHHH----HHhcCCCEEEEEcccccC-CCCCCcchHHHHHHhhcccceeecCCCCcc
Q 019935          207 KFNELPWSIMNLFGVLKYKK--MGEDF----VQKSGLPFTIIRAGRLTD-GPYTSYDLNTLLKATAGERRAVLMGQGDKL  279 (333)
Q Consensus       207 ~~~~~~~~~~~~~~~~k~k~--~~e~~----l~~~gi~~~~vrpg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (333)
                      ..      ....|+.+|.-.  .+...    +... |++++|+||++ . ++.... ......... .         .. 
T Consensus       808 ~g------g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V-~gT~m~~~-~~~~~~~~~-~---------~p-  867 (1878)
T 2uv9_A          808 FG------NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWT-RGTGLMSA-NNLVAEGVE-K---------LG-  867 (1878)
T ss_dssp             SS------CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCB-CCTTSCSH-HHHTHHHHH-T---------TT-
T ss_pred             cC------CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecce-ecCccccc-chhhHHHHH-h---------cC-
Confidence            42      234577665421  11112    2223 99999999955 4 443221 000001110 0         01 


Q ss_pred             cccccHHHHHHHHHHhccCcc---cCCcEEEec
Q 019935          280 IGEVSRIVVAEACIQALDIEF---TEGEIYEIN  309 (333)
Q Consensus       280 ~~~i~v~Dva~a~~~~l~~~~---~~g~~~~v~  309 (333)
                      ..+.+++|+|+++++++....   ..|+.+.+.
T Consensus       868 lr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          868 VRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFAD  900 (1878)
T ss_dssp             CCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEE
T ss_pred             CCCCCHHHHHHHHHHHhCCcccccccCcEEEEE
Confidence            134589999999999998653   347777764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.67  E-value=6.3e-17  Score=170.17  Aligned_cols=213  Identities=15%  Similarity=0.073  Sum_probs=137.7

Q ss_pred             CCCCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEE-EcCcchhhhhh----ccCC--CCceEEEEccCCCcCCCchhhh
Q 019935           78 PASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLF----GKQD--EETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~----~~~~--~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      +++++|++|||||+|+ ||+++++.|+++|++|+++ .|+.++.+...    ....  +.++.++.+|++|.++++ +++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~-alv  749 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE-ALI  749 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHH-HHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHH-HHH
Confidence            3567899999999998 9999999999999999998 57665543321    1111  456889999999998877 433


Q ss_pred             ------------c-CCcEEEEcCCCCCCC-C-CC----CCCCCCCcchhHHHHHHHHHhc---CC----CCCeEEEEecc
Q 019935          150 ------------E-GVTHVICCTGTTAFP-S-RR----WDGDNTPEKVDWEGVRNLVSAL---PS----SLKRIVLVSSV  203 (333)
Q Consensus       150 ------------~-~~d~vi~~a~~~~~~-~-~~----~~~~~~~~~~n~~~~~~l~~a~---~~----~~~~~v~~SS~  203 (333)
                                  . ++|+||||||..... . ..    .+.....+++|+.+++++++++   ..    +.++||++||.
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence                        2 699999999986421 1 11    1122457889999999999865   11    23599999998


Q ss_pred             ccccCCCCCccchhhhHHHHHHH------HHHHHHHhcCCCEEEEEcccccC-CCCCCcchHHHHHHhhcccceeecCCC
Q 019935          204 GVTKFNELPWSIMNLFGVLKYKK------MGEDFVQKSGLPFTIIRAGRLTD-GPYTSYDLNTLLKATAGERRAVLMGQG  276 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~k~------~~e~~l~~~gi~~~~vrpg~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (333)
                      .+...      ....|+.+|.-.      .+...+... |++++|+||++ . .+..... ........          .
T Consensus       830 ag~~g------g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V-~tT~m~~~~-~~~~~~~~----------~  890 (1887)
T 2uv8_A          830 HGTFG------GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWT-RGTGLMSAN-NIIAEGIE----------K  890 (1887)
T ss_dssp             TTCSS------CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCE-ECC-----C-CTTHHHHH----------T
T ss_pred             HhccC------CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEeccc-ccccccccc-hhHHHHHH----------h
Confidence            87542      334577665421      111112233 99999999965 4 2221100 00000000          0


Q ss_pred             CcccccccHHHHHHHHHHhccCc-c--cCCcEEEec--CC
Q 019935          277 DKLIGEVSRIVVAEACIQALDIE-F--TEGEIYEIN--SV  311 (333)
Q Consensus       277 ~~~~~~i~v~Dva~a~~~~l~~~-~--~~g~~~~v~--~g  311 (333)
                      .. ..+.+++|+|+++++++... .  ..|+.+.++  ||
T Consensus       891 ~p-lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG  929 (1887)
T 2uv8_A          891 MG-VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGG  929 (1887)
T ss_dssp             TS-CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCS
T ss_pred             cC-CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCC
Confidence            01 14568999999999999875 2  347777764  54

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.66  E-value=4e-17  Score=150.93  Aligned_cols=215  Identities=11%  Similarity=0.061  Sum_probs=132.0

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHhCCCeEEEEEcCcchh------------hhhhc--cCCCCceEEEEccCCCcCC
Q 019935           80 SSSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPEKA------------TTLFG--KQDEETLQVCKGDTRNPKD  143 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~R~~~~~------------~~~~~--~~~~~~~~~v~~D~~d~~~  143 (333)
                      ..+|++|||||+++||++  +++.|+++|++|++++|+....            +.+.+  ...+..+..+.+|++|+++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            567899999999999999  9999999999999999965331            11111  0115568889999999988


Q ss_pred             Cchhh-------hcCCcEEEEcCCCCCC-----------CCCCCC--------------------------CCCCCcchh
Q 019935          144 LDPAI-------FEGVTHVICCTGTTAF-----------PSRRWD--------------------------GDNTPEKVD  179 (333)
Q Consensus       144 ~~~~~-------~~~~d~vi~~a~~~~~-----------~~~~~~--------------------------~~~~~~~~n  179 (333)
                      ++ ++       +.++|+||||||....           ......                          .....+++|
T Consensus       138 v~-~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          138 KD-KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HH-HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            77 43       3478999999997410           000000                          000122333


Q ss_pred             HHHHH-HHHHhc-CC----CCCeEEEEeccccccCCCCCccch--hhhHHHHH-----HHHHHHHHHh-cCCCEEEEEcc
Q 019935          180 WEGVR-NLVSAL-PS----SLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQK-SGLPFTIIRAG  245 (333)
Q Consensus       180 ~~~~~-~l~~a~-~~----~~~~~v~~SS~~~~~~~~~~~~~~--~~~~~~k~-----k~~~e~~l~~-~gi~~~~vrpg  245 (333)
                      ..+.. .+++++ ..    ...++|++||++...    +++..  ..|+.+|.     .+.+...+.. .|+++++|.||
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~----~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG  292 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR----TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNK  292 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG----GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC----CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECC
Confidence            33333 444433 11    225899999987754    22233  56776663     4566677788 89999999999


Q ss_pred             cccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCC
Q 019935          246 RLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSV  311 (333)
Q Consensus       246 ~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g  311 (333)
                      .+ ..+....  ..+.......           .........+|+++++.+++.+.-..|..+.++++
T Consensus       293 ~v-~T~~s~~ip~~p~y~~~~~-----------~~mk~~G~~E~v~e~~~~L~sd~~~~g~~~~~D~~  348 (418)
T 4eue_A          293 AL-VTKASAYIPTFPLYAAILY-----------KVMKEKNIHENCIMQIERMFSEKIYSNEKIQFDDK  348 (418)
T ss_dssp             CC-CCHHHHTSTTHHHHHHHHH-----------HHHHHTTCCCCHHHHHHHHHHHTTSSSSCCCCCTT
T ss_pred             cC-cChhhhcCCCCcHHHHHHH-----------HHHhhcCChHHHHHHHHHHhhccccCCCccccCCC
Confidence            55 3332110  0111111110           01223455679999999999875444555555554

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.66  E-value=1.6e-16  Score=159.06  Aligned_cols=204  Identities=19%  Similarity=0.154  Sum_probs=139.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHH-hCCC-eEEEEEcCcc---hhhhhhccC--CCCceEEEEccCCCcCCCchhhhc--
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLL-SRNI-KSRLLLRDPE---KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE--  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~-~V~~~~R~~~---~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~--  150 (333)
                      .+++++|||||+|+||++++++|+ ++|+ +|++++|+..   +.+++.++.  .+.++.++.+|++|+++++ ++++  
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~-~~~~~~  606 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLA-KVLASI  606 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHTS
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH-HHHHHH
Confidence            357899999999999999999999 7898 5889999843   233322211  1567889999999998887 5543  


Q ss_pred             ----CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          151 ----GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       151 ----~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                          .+|+||||||......   ...+.....+++|+.|+.++.+++.... +||++||++...    +......|+.+|
T Consensus       607 ~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~----g~~g~~~YaAak  681 (795)
T 3slk_A          607 PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVL----GSGGQGNYAAAN  681 (795)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHH----TCSSCHHHHHHH
T ss_pred             HHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcC----CCCCCHHHHHHH
Confidence                5799999999864211   1122233467889999999999885444 999999998765    445566788776


Q ss_pred             H-HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          224 Y-KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       224 ~-k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      . ...+.++++..|++++.|.||.+ .+..   ....+.....  ....     ......+..+++...+..++..+.
T Consensus       682 a~~~alA~~~~~~Gi~v~sI~pG~v-~t~g---~~~~~~~~~~--~~~~-----~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          682 SFLDALAQQRQSRGLPTRSLAWGPW-AEHG---MASTLREAEQ--DRLA-----RSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCC-SCCC---HHHHHHHHHH--HHHH-----HTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHcCCeEEEEECCeE-Ccch---hhccccHHHH--HHHH-----hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            4 24455667788999999999955 3322   1111111000  0000     011245778888888888887653

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=2e-17  Score=168.85  Aligned_cols=210  Identities=16%  Similarity=0.085  Sum_probs=136.6

Q ss_pred             CCCCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEE-EcCcchhhhhh----ccCC--CCceEEEEccCCCcCCCchhhh
Q 019935           78 PASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLF----GKQD--EETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~----~~~~--~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      +++++|++|||||+|+ ||+++++.|+++|++|+++ .|+.++.+...    ....  +.++.++.+|++|.++++ +++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe-aLV  550 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE-ALI  550 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH-HHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH-HHH
Confidence            3467899999999998 9999999999999999998 56655543322    1111  346888999999999887 443


Q ss_pred             ------------c-CCcEEEEcCCCCCCC-C-CC----CCCCCCCcchhHHHHHHHHHhcC------C-CCCeEEEEecc
Q 019935          150 ------------E-GVTHVICCTGTTAFP-S-RR----WDGDNTPEKVDWEGVRNLVSALP------S-SLKRIVLVSSV  203 (333)
Q Consensus       150 ------------~-~~d~vi~~a~~~~~~-~-~~----~~~~~~~~~~n~~~~~~l~~a~~------~-~~~~~v~~SS~  203 (333)
                                  . ++|+||||||..... . ..    .+.....+++|+.++++++++++      . +.++||++||.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence                        2 599999999975421 1 11    11224468899999999988651      1 23589999998


Q ss_pred             ccccCCCCCccchhhhHHHHHHHHHHHH----HHh-c--CCCEEEEEcccccCC-CCCCcchHHHHHHhhcccceeecCC
Q 019935          204 GVTKFNELPWSIMNLFGVLKYKKMGEDF----VQK-S--GLPFTIIRAGRLTDG-PYTSYDLNTLLKATAGERRAVLMGQ  275 (333)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~k~k~~~e~~----l~~-~--gi~~~~vrpg~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~  275 (333)
                      ++...      ....|+.+|  ..++.+    +.+ .  +|++++|+||++ .+ +....  ...      ...  .. .
T Consensus       631 AG~~G------g~saYaASK--AAL~aLttrsLAeEla~~IRVNaVaPG~V-~TT~M~~~--~e~------~~~--~l-~  690 (1688)
T 2pff_A          631 HGTFG------GDGMYSESK--LSLETLFNRWHSESWANQLTVCGAIIGWT-RGTGLMSA--NNI------IAE--GI-E  690 (1688)
T ss_dssp             TTTSS------CBTTHHHHH--HHHTHHHHHTTTSSCTTTEECCCCCCCCC-CCCSSSCT--TTT------CST--TT-S
T ss_pred             HhccC------CchHHHHHH--HHHHHHHHHHHHHHcCCCeEEEEEEECcC-cCCcccCC--chH------HHH--HH-H
Confidence            77542      334566554  444443    211 1  289999999955 42 22110  000      000  00 0


Q ss_pred             CCcccccccHHHHHHHHHHhccCc-c--cCCcEEEec
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIE-F--TEGEIYEIN  309 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~-~--~~g~~~~v~  309 (333)
                      ... ..+.+++|+|++++++++.. .  ..|+.+.+.
T Consensus       691 ~ip-lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VD  726 (1688)
T 2pff_A          691 KMG-VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  726 (1688)
T ss_dssp             SSS-CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCC
T ss_pred             hCC-CCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            011 13558899999999999876 2  347777764

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.62  E-value=8.1e-18  Score=152.14  Aligned_cols=166  Identities=11%  Similarity=0.114  Sum_probs=111.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .++|+||||+||||++++..|+..|+       +|+++++.+.  +............+.++ +|+.+.+++. +.++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~-~a~~~~   81 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPK-VAFKDA   81 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHH-HHTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChH-HHhCCC
Confidence            35899999999999999999999986       8999988642  22111000002122233 6887777777 788999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CC-eEEEEecccc---cc-CCCC-CccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVSSVGV---TK-FNEL-PWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~-~~v~~SS~~~---~~-~~~~-~~~~~~~~~~~k~  224 (333)
                      |+|||+||....+   .....++++.|+.++.++++++++ + .+ +|+++|+...   +- .+.. ++++...|+.+|.
T Consensus        82 D~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl  158 (327)
T 1y7t_A           82 DYALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRL  158 (327)
T ss_dssp             SEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred             CEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchH
Confidence            9999999976432   233345788999999999998854 4 54 7888777541   11 1222 3556677886554


Q ss_pred             H--HHHHHHHHhcCCCEEEEEcccccCCCCC
Q 019935          225 K--KMGEDFVQKSGLPFTIIRAGRLTDGPYT  253 (333)
Q Consensus       225 k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~  253 (333)
                      .  +....+.+..|++++++|+.++ +|+.+
T Consensus       159 ~~er~~~~~a~~~g~~~~~vr~~~V-~G~h~  188 (327)
T 1y7t_A          159 DHNRAKAQLAKKTGTGVDRIRRMTV-WGNHS  188 (327)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEECCEE-EBCSS
T ss_pred             HHHHHHHHHHHHhCcChhheeeeEE-EcCCC
Confidence            2  2233334567999999999855 67754

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.47  E-value=3.6e-13  Score=148.44  Aligned_cols=230  Identities=16%  Similarity=0.144  Sum_probs=135.6

Q ss_pred             CCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccCC--CCceEEEEccCCCcCCCch-----
Q 019935           80 SSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EETLQVCKGDTRNPKDLDP-----  146 (333)
Q Consensus        80 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~~--~~~~~~v~~D~~d~~~~~~-----  146 (333)
                      +.+|++|||||+++ ||+++++.|+++|++|++++|+.+.     .+++.+...  +.++..+.+|++|++++++     
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            67899999999999 9999999999999999999998766     444433221  4457789999999887762     


Q ss_pred             -h----hhcCCcEEEEcCCC----CCC----CCCCCCCCCCC----cchhHHHHHHHHHhcC-----CCCC---eEEEEe
Q 019935          147 -A----IFEGVTHVICCTGT----TAF----PSRRWDGDNTP----EKVDWEGVRNLVSALP-----SSLK---RIVLVS  201 (333)
Q Consensus       147 -~----~~~~~d~vi~~a~~----~~~----~~~~~~~~~~~----~~~n~~~~~~l~~a~~-----~~~~---~~v~~S  201 (333)
                       +    .++++|++|||||.    ...    .....+.....    +++|+.+++.+++++.     .+..   .+|..+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence             1    34579999999997    111    01112222223    6788999988887551     1221   222222


Q ss_pred             ccccccCCCCCccchhhhHHHHH-----HHHHHHH--HHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecC
Q 019935          202 SVGVTKFNELPWSIMNLFGVLKY-----KKMGEDF--VQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMG  274 (333)
Q Consensus       202 S~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~--l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  274 (333)
                      |.. .+    .+.....|+.+|.     .+.+..+  +. .+++++.+.||++-..+.... ......... .     . 
T Consensus      2294 ss~-~g----~~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~~-~~~~~~~~~-~-----~- 2359 (3089)
T 3zen_D         2294 SPN-RG----MFGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMGQ-NDAIVSAVE-E-----A- 2359 (3089)
T ss_dssp             CSS-TT----SCSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTTT-TTTTHHHHG-G-----G-
T ss_pred             Ccc-cc----cCCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCccccc-chhHHHHHH-h-----c-
Confidence            221 11    1112234665553     2222222  22 359999999996631221110 000011110 0     0 


Q ss_pred             CCCcccccccHHHHHHHHHHhccCccc---CCcEE--EecCCCCCCCCCCcccHHHHHHHHh
Q 019935          275 QGDKLIGEVSRIVVAEACIQALDIEFT---EGEIY--EINSVEGEGPGSDPQKWRELFKAAK  331 (333)
Q Consensus       275 ~~~~~~~~i~v~Dva~a~~~~l~~~~~---~g~~~--~v~~g~~~~~~~~~~s~~e~~~~i~  331 (333)
                         . ....+++|+|.+++++++....   .++.+  .++||-.    .....+.|+...++
T Consensus      2360 ---~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~----~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2360 ---G-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG----DIKIDMAELAAKAR 2413 (3089)
T ss_dssp             ---S-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS----SCCCCHHHHTHHHH
T ss_pred             ---C-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC----cCCCCHHHHHHHHH
Confidence               0 1233899999999999986531   23334  4446532    12467777776553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.37  E-value=8e-13  Score=145.77  Aligned_cols=162  Identities=17%  Similarity=0.133  Sum_probs=111.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhh---hhhccC--CCCceEEEEccCCCcCCCchhhh-----
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKAT---TLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-----  149 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~---~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~-----  149 (333)
                      .++++|||||+|+||+++++.|+++|++ |++++|+..+.+   ......  .+.++.++.+|++|.++++ +++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~-~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGAR-SLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHH-HHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHH-HHHHHHHh
Confidence            5789999999999999999999999997 777888764321   111111  1456888999999998887 443     


Q ss_pred             -cCCcEEEEcCCCCCC---CCCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 -EGVTHVICCTGTTAF---PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                       ..+|+||||||....   .....+.....+++|+.|+.++.+++..   ..++||++||+++..    +......|+.+
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~----g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR----GNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT----TCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC----CCCCcHHHHHH
Confidence             479999999997542   1223455667899999999999776521   247999999988754    33445567766


Q ss_pred             HHH-HHHHHHHHhcCCCEEEEEcccc
Q 019935          223 KYK-KMGEDFVQKSGLPFTIIRAGRL  247 (333)
Q Consensus       223 k~k-~~~e~~l~~~gi~~~~vrpg~~  247 (333)
                      |.- ...-++++..|++...+..|.+
T Consensus      2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2038 NSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccCc
Confidence            543 2333456678999999998854

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.31  E-value=1.9e-12  Score=98.51  Aligned_cols=95  Identities=17%  Similarity=0.155  Sum_probs=77.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++|+|+|+ |++|+++++.|++.| ++|++++|++++.+.+.    ..++.++.+|+.+.+.+. +.+.++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~-~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLA-KALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHH-HHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHH-HHHcCCCEEEECC
Confidence            4578999999 999999999999999 99999999988877665    457788999999998888 7889999999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEE
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLV  200 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~  200 (333)
                      +..                   ....+++++ +.++++|.+.
T Consensus        78 ~~~-------------------~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           78 PFF-------------------LTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             CGG-------------------GHHHHHHHHHHTTCEEECCC
T ss_pred             Cch-------------------hhHHHHHHHHHhCCCEEEec
Confidence            642                   135666655 4477666543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.11  E-value=3.1e-11  Score=106.79  Aligned_cols=83  Identities=19%  Similarity=0.202  Sum_probs=68.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +++++++|||||+|++|++++..|++.|++|++++|+.++.+++.+.... .++.++.+|++|+++++ +.++.+|+|||
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~-~~~~~~DvlVn  194 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRA-EAVKGAHFVFT  194 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHH-HHTTTCSEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHH-HHHHhCCEEEE
Confidence            45678999999999999999999999999999999998776655432211 24667889999998888 78889999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      |++..
T Consensus       195 ~ag~g  199 (287)
T 1lu9_A          195 AGAIG  199 (287)
T ss_dssp             CCCTT
T ss_pred             CCCcc
Confidence            99864

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.97  E-value=1.4e-09  Score=85.41  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-hcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-~~~~d~vi~~  158 (333)
                      .++++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.    ..+..++.+|..+++.+. ++ +.++|+||++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~~~~~~~d~~~~~~l~-~~~~~~~d~vi~~   77 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYATHAVIANATEENELL-SLGIRNFEYVIVA   77 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTCSEEEECCTTCHHHHH-TTTGGGCSEEEEC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhCCEEEEeCCCCHHHHH-hcCCCCCCEEEEC
Confidence            35678999998 99999999999999999999999987766544    234567889998877666 44 6789999999


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      ++.
T Consensus        78 ~~~   80 (144)
T 2hmt_A           78 IGA   80 (144)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            863

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.93  E-value=2.6e-10  Score=102.75  Aligned_cols=117  Identities=10%  Similarity=0.077  Sum_probs=80.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcC----cchhhhhhccCCCCceEEEEccCCCcCCCchhhhc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRD----PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~----~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~  150 (333)
                      .++|+||||+|++|++++..|+..|.       +|++++++    .++.+............+ ..|+....++. ++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~-~al~   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPM-TAFK   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHH-HHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcH-HHhC
Confidence            46899999999999999999999885       89999888    443332110000111111 24555556666 7889


Q ss_pred             CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CC-eEEEEecc
Q 019935          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVSSV  203 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~-~~v~~SS~  203 (333)
                      ++|+|||+||...-+   .....++...|+.++.++++++++ + .+ +||++|..
T Consensus        83 ~aD~Vi~~ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP  135 (329)
T 1b8p_A           83 DADVALLVGARPRGP---GMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNP  135 (329)
T ss_dssp             TCSEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             CCCEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCc
Confidence            999999999975321   112234667899999999998744 3 44 88888863

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.91  E-value=1.7e-09  Score=97.26  Aligned_cols=115  Identities=19%  Similarity=0.184  Sum_probs=79.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhh--hhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATT--LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~--~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +++|+||||+|++|..++..|+..|  ++|+++++++++...  +...  .....+ .+ +.+..++. ++++++|+|||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~--~~~~~v-~~-~~~t~d~~-~al~gaDvVi~   82 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHM--DTGAVV-RG-FLGQQQLE-AALTGMDLIIV   82 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTS--CSSCEE-EE-EESHHHHH-HHHTTCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcc--cccceE-EE-EeCCCCHH-HHcCCCCEEEE
Confidence            4689999999999999999999998  899999987652221  2211  111111 11 11223455 67899999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVG  204 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~  204 (333)
                      +||....+   .....++...|+.++.++++++++ +.+.+|+++|--
T Consensus        83 ~ag~~~~~---g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNP  127 (326)
T 1smk_A           83 PAGVPRKP---GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNP  127 (326)
T ss_dssp             CCCCCCCS---SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred             cCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCc
Confidence            99964321   222345688899999999998754 677777777643

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.87  E-value=5.2e-10  Score=100.04  Aligned_cols=114  Identities=16%  Similarity=0.130  Sum_probs=77.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEc--Ccchhhh----hhc--cCCCCceEEEEccCCCcCCCchhhhcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATT----LFG--KQDEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~~----~~~--~~~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ++|+||||+|++|++++..|+..|.  +++++++  ++++.+.    +..  ...+..+.+...    .+++. ++++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~-~al~ga   75 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENL-RIIDES   75 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCG-GGGTTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchH-HHhCCC
Confidence            4899999999999999999998874  6788887  5433321    110  000122232221    13466 789999


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccc
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGV  205 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~  205 (333)
                      |+|||+||...-+   .....++++.|+.++.++++++++ + +++|+++|--+
T Consensus        76 D~Vi~~Ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv  125 (313)
T 1hye_A           76 DVVIITSGVPRKE---GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV  125 (313)
T ss_dssp             SEEEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred             CEEEECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence            9999999964311   122234678899999999998854 7 87888777543

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.85  E-value=2.8e-09  Score=83.66  Aligned_cols=75  Identities=20%  Similarity=0.185  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+.    ..++.++.+|.+|++.+++..+.++|+||.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DEGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            4568999997 99999999999999999999999998877665    346788999999988877223568999998875

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.84  E-value=1.5e-08  Score=91.46  Aligned_cols=83  Identities=14%  Similarity=0.046  Sum_probs=63.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEEcCcchhhh------------hhccC--CCCceEEEEccCCCcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEKATT------------LFGKQ--DEETLQVCKGDTRNPKD  143 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~------------~~~~~--~~~~~~~v~~D~~d~~~  143 (333)
                      ...+|++|||||++++|.+.+..|+ +.|.+|+++.+..+..+.            +.+..  .+..+..+.+|++|++.
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            3456899999999999999999998 679999999886533211            11100  16678899999999888


Q ss_pred             Cchhh-------hcCCcEEEEcCCCC
Q 019935          144 LDPAI-------FEGVTHVICCTGTT  162 (333)
Q Consensus       144 ~~~~~-------~~~~d~vi~~a~~~  162 (333)
                      ++ ++       ++++|+|||+++..
T Consensus       127 i~-~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          127 KA-QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HH-HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HH-HHHHHHHHhcCCCCEEEEecccc
Confidence            77 43       45899999999975

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.83  E-value=4e-09  Score=93.79  Aligned_cols=112  Identities=17%  Similarity=0.119  Sum_probs=75.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEc--CcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R--~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ++|+||||+|++|++++..|+..|.  +++++++  ++++.+......     ....+.+.. |     . . +.++++|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~-----~-~-~a~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G-----G-Y-EDTAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C-----C-G-GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C-----C-H-HHhCCCC
Confidence            4899999999999999999998875  6888888  554432211000     012233322 1     1 3 5688999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecccc
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGV  205 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~  205 (333)
                      +|||+||....+   .....+++..|+.++.++++++++ +.+.+|+++|--+
T Consensus        73 vVi~~ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv  122 (303)
T 1o6z_A           73 VVVITAGIPRQP---GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV  122 (303)
T ss_dssp             EEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred             EEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence            999999964321   111224678899999999998854 6677777776543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.80  E-value=6.9e-09  Score=97.25  Aligned_cols=78  Identities=27%  Similarity=0.198  Sum_probs=65.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+.++.+.+....  .++..+.+|+.|.+++. ++++++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~--~~~~~~~~Dv~d~~~l~-~~l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV--QHSTPISLDVNDDAALD-AEVAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC--TTEEEEECCTTCHHHHH-HHHTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc--CCceEEEeecCCHHHHH-HHHcCCcEEEECCc
Confidence            357899998 799999999999999999999999988877665432  24778899999988888 78889999999998


Q ss_pred             CC
Q 019935          161 TT  162 (333)
Q Consensus       161 ~~  162 (333)
                      ..
T Consensus        78 ~~   79 (450)
T 1ff9_A           78 YT   79 (450)
T ss_dssp             --
T ss_pred             cc
Confidence            64

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.66  E-value=1e-08  Score=94.90  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=65.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhhhccCC---CCceEEEEccCCCcCCCchhhhcC--Cc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEG--VT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~D~~d~~~~~~~~~~~--~d  153 (333)
                      |++|+|+|| |++|+++++.|++.|   .+|++.+|+.++.+.+.+...   ..++..+.+|++|.++++ +++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~-~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELV-ALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHH-HHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHH-HHHHhhCCC
Confidence            368999998 999999999999998   389999999988776654321   136888999999999998 78876  99


Q ss_pred             EEEEcCCC
Q 019935          154 HVICCTGT  161 (333)
Q Consensus       154 ~vi~~a~~  161 (333)
                      +||||++.
T Consensus        79 vVin~ag~   86 (405)
T 4ina_A           79 IVLNIALP   86 (405)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999975

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.66  E-value=3.7e-08  Score=83.00  Aligned_cols=76  Identities=14%  Similarity=0.222  Sum_probs=56.7

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC
Q 019935           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        79 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ++.+|+||||||                +|++|.+++++|+++|++|+++.|+.. .+ .     ..++.  ..|+.+.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~-----~~g~~--~~dv~~~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-T-----PPFVK--RVDVMTAL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C-----CTTEE--EEECCSHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c-----CCCCe--EEccCcHH
Confidence            467899999999                699999999999999999999988652 11 0     12333  45777655


Q ss_pred             CCch---hhhcCCcEEEEcCCCCC
Q 019935          143 DLDP---AIFEGVTHVICCTGTTA  163 (333)
Q Consensus       143 ~~~~---~~~~~~d~vi~~a~~~~  163 (333)
                      ++.+   +.+.++|++|||||...
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence            4432   23568999999999764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.63  E-value=2.9e-08  Score=83.83  Aligned_cols=76  Identities=20%  Similarity=0.276  Sum_probs=53.8

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCC
Q 019935           81 SSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL  144 (333)
Q Consensus        81 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~  144 (333)
                      .+|+||||||                +|++|.+++++|+++|++|+++.|+..... ..    ..++.++  |+...+++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~----~~~~~~~--~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EP----HPNLSIR--EITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CC----CTTEEEE--ECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cC----CCCeEEE--EHhHHHHH
Confidence            4689999999                999999999999999999999999753211 00    2244444  44333222


Q ss_pred             ch---hhhcCCcEEEEcCCCCC
Q 019935          145 DP---AIFEGVTHVICCTGTTA  163 (333)
Q Consensus       145 ~~---~~~~~~d~vi~~a~~~~  163 (333)
                      ..   +.+.++|++||||+...
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHhcCCCCEEEEcCcccc
Confidence            21   34568999999999754

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.62  E-value=2.6e-08  Score=93.59  Aligned_cols=79  Identities=24%  Similarity=0.233  Sum_probs=65.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+++++|+|+|+ |++|+++++.|++. |++|++++|+.++.+.+...   .++..+.+|+.|.+++. ++++++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~~~~~~~~D~~d~~~l~-~~l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---SGSKAISLDVTDDSALD-KVLADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---GTCEEEECCTTCHHHHH-HHHHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---cCCcEEEEecCCHHHHH-HHHcCCCEEEE
Confidence            455679999997 99999999999998 78999999998888776542   24677789999988888 78889999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +++..
T Consensus        95 ~tp~~   99 (467)
T 2axq_A           95 LIPYT   99 (467)
T ss_dssp             CSCGG
T ss_pred             CCchh
Confidence            99864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.56  E-value=8.7e-08  Score=76.24  Aligned_cols=77  Identities=14%  Similarity=0.201  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+.+.... ..++.++.+|.+|++.+++..++++|+||.+.+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            457999996 9999999999999999999999974 4333332111 346889999999998887233889999999875

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.56  E-value=8.6e-08  Score=74.65  Aligned_cols=75  Identities=27%  Similarity=0.286  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++|+|+|+ |++|+.+++.|.+.|++|++++|+++..+.+..   ..++.++.+|..+++.+.+..+.++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EIDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            358999986 999999999999999999999999877765542   125667889988876665223678999999974

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.51  E-value=1.8e-07  Score=73.19  Aligned_cols=75  Identities=21%  Similarity=0.264  Sum_probs=63.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ..++|+|.|. |.+|+.+++.|.+.|++|+++++++++.+.+.    ..++.++.+|.++++.+++..+.++|+||.+.+
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            3457999996 99999999999999999999999998887765    357788999999998877334678999998875

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.49  E-value=3.2e-07  Score=73.09  Aligned_cols=76  Identities=20%  Similarity=0.194  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-hcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-~~~~d~vi~~  158 (333)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+..   ..++.++.+|..+++.+. +. +.++|+||.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~-~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLK-ECGMEKADMVFAF   91 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHH-TTTGGGCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHH-HcCcccCCEEEEE
Confidence            34578999995 999999999999999999999999887765431   234667788988776665 43 6789999999


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      .+
T Consensus        92 ~~   93 (155)
T 2g1u_A           92 TN   93 (155)
T ss_dssp             SS
T ss_pred             eC
Confidence            85

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.48  E-value=1.6e-07  Score=85.74  Aligned_cols=75  Identities=19%  Similarity=0.184  Sum_probs=62.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+.|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++.+.+     ...+..+..|+.|.+++. ++++++|+||++
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-----~~~~~~~~~d~~d~~~l~-~~~~~~DvVi~~   84 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-----KEFATPLKVDASNFDKLV-EVMKEFELVIGA   84 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-----TTTSEEEECCTTCHHHHH-HHHTTCSEEEEC
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-----hccCCcEEEecCCHHHHH-HHHhCCCEEEEe
Confidence            345568999998 9999999999865 58999999998887766     345677889999999999 889999999999


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      +++
T Consensus        85 ~p~   87 (365)
T 3abi_A           85 LPG   87 (365)
T ss_dssp             CCG
T ss_pred             cCC
Confidence            875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.41  E-value=2.6e-07  Score=76.62  Aligned_cols=99  Identities=21%  Similarity=0.222  Sum_probs=69.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.    +... ..|..+.+..+ ..   .  .++|+|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~~-~~d~~~~~~~~-~~~~~~~~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GVEY-VGDSRSVDFAD-EILELTDGYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CCSE-EEETTCSTHHH-HHHHHTTTCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCE-EeeCCcHHHHH-HHHHHhCCCCCeEE
Confidence            467999999999999999999999999999999988776554421    2222 24776654333 22   2  269999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |+|+|..                   .....++.++.+ +++|.+++...
T Consensus       112 i~~~g~~-------------------~~~~~~~~l~~~-G~~v~~g~~~~  141 (198)
T 1pqw_A          112 LNSLAGE-------------------AIQRGVQILAPG-GRFIELGKKDV  141 (198)
T ss_dssp             EECCCTH-------------------HHHHHHHTEEEE-EEEEECSCGGG
T ss_pred             EECCchH-------------------HHHHHHHHhccC-CEEEEEcCCCC
Confidence            9998631                   234555666543 58998887653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.40  E-value=1.1e-07  Score=85.46  Aligned_cols=115  Identities=17%  Similarity=0.139  Sum_probs=73.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--e-----EEEEEcCcc--hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--K-----SRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~-----V~~~~R~~~--~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ++|+||||+|+||++++..|+..|.  +     ++++++++.  +.+.......+....++ .++....... +.++++|
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~-~~~~daD   81 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEE-IAFKDLD   81 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHH-HHTTTCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcH-HHhCCCC
Confidence            5899999999999999999998874  5     899988642  22221100001000001 1222223344 6788999


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC--eEEEEec
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVSS  202 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~--~~v~~SS  202 (333)
                      +||++||...-+   -....+.++.|...+..+++++++ +.+  +++.+|-
T Consensus        82 vVvitAg~prkp---G~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           82 VAILVGSMPRRD---GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999999864322   223356789999999999998754 443  5666654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.38  E-value=3.2e-07  Score=75.19  Aligned_cols=75  Identities=24%  Similarity=0.208  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh--hcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~--~~~~d~vi  156 (333)
                      ..+++|+|+| .|.+|+.+++.|.+. |++|++++|++++.+.+.    ..++.++.+|.++++.+. ++  ++++|+||
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g~~~~~gd~~~~~~l~-~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEGRNVISGDATDPDFWE-RILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTTCCEEECCTTCHHHHH-TBCSCCCCCEEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCCCCEEEcCCCCHHHHH-hccCCCCCCEEE
Confidence            3456899998 599999999999999 999999999998877655    336778889999887766 55  67899999


Q ss_pred             EcCC
Q 019935          157 CCTG  160 (333)
Q Consensus       157 ~~a~  160 (333)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            9874

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.33  E-value=4.3e-07  Score=76.61  Aligned_cols=74  Identities=20%  Similarity=0.219  Sum_probs=62.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+..   ..++.++.+|.++++.+++..+.++|+||.+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAK---KLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---HSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---HcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            47999996 999999999999999999999999988776542   236788999999998887334789999998764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.27  E-value=1e-06  Score=77.03  Aligned_cols=77  Identities=18%  Similarity=0.228  Sum_probs=55.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++++|+|+ |++|++++..|++.|++|++++|+.++.+.+.+...... .+   |+.+.+++. +  .++|+|||+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~---~~~~~~~~~-~--~~~DivVn~  187 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI---QALSMDELE-G--HEFDLIINA  187 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE---EECCSGGGT-T--CCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce---eEecHHHhc-c--CCCCEEEEC
Confidence            456789999998 889999999999999999999999887766653321111 11   222323333 2  689999999


Q ss_pred             CCCCC
Q 019935          159 TGTTA  163 (333)
Q Consensus       159 a~~~~  163 (333)
                      ++...
T Consensus       188 t~~~~  192 (271)
T 1nyt_A          188 TSSGI  192 (271)
T ss_dssp             CSCGG
T ss_pred             CCCCC
Confidence            98754

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.21  E-value=1.4e-06  Score=77.75  Aligned_cols=111  Identities=22%  Similarity=0.204  Sum_probs=72.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhh--hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++|.|+||+|++|..++..|+..|  .+|+++++++.+..  .+.......++....+    ..+++ ++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~-~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLP-DCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHH-HHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHH-HHhCCCCEEEEC
Confidence            489999999999999999999888  78999999873222  1211100111211111    12355 578999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +|...-+   -....+....|+..+..+++.+++ .. .+||++|
T Consensus        76 ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           76 AGVPRKP---GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             CSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCcCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            9875322   112234667888999999987643 32 4777654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.19  E-value=1.7e-06  Score=76.84  Aligned_cols=84  Identities=13%  Similarity=0.127  Sum_probs=61.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCC
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .+..++++||+|+ |++|++++..|++.|. +|++++|+   .++++++.+... ..+..+...++.+.+++. +.+.++
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~-~~l~~a  227 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR-KEIAES  227 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH-HHHHTC
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH-hhhcCC
Confidence            3567899999997 8999999999999998 89999999   667666543221 112333345665555566 667889


Q ss_pred             cEEEEcCCCCC
Q 019935          153 THVICCTGTTA  163 (333)
Q Consensus       153 d~vi~~a~~~~  163 (333)
                      |+|||+.....
T Consensus       228 DiIINaTp~Gm  238 (315)
T 3tnl_A          228 VIFTNATGVGM  238 (315)
T ss_dssp             SEEEECSSTTS
T ss_pred             CEEEECccCCC
Confidence            99999987654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.17  E-value=2.5e-06  Score=76.69  Aligned_cols=99  Identities=17%  Similarity=0.213  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.  +  .. ...|+.+.+++. +.+     .++|+|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~--g--~~-~~~d~~~~~~~~-~~~~~~~~~~~d~v  218 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--G--FD-AAFNYKTVNSLE-EALKKASPDGYDCY  218 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--T--CS-EEEETTSCSCHH-HHHHHHCTTCEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--C--Cc-EEEecCCHHHHH-HHHHHHhCCCCeEE
Confidence            568999999999999999999999999999999988776655321  2  21 234777744544 222     369999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |+|+|..                   .....+++++. .++++.++....
T Consensus       219 i~~~g~~-------------------~~~~~~~~l~~-~G~~v~~g~~~~  248 (333)
T 1v3u_A          219 FDNVGGE-------------------FLNTVLSQMKD-FGKIAICGAISV  248 (333)
T ss_dssp             EESSCHH-------------------HHHHHHTTEEE-EEEEEECCCCC-
T ss_pred             EECCChH-------------------HHHHHHHHHhc-CCEEEEEecccc
Confidence            9999731                   12334444443 258888776543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.16  E-value=3.3e-06  Score=76.37  Aligned_cols=99  Identities=17%  Similarity=0.151  Sum_probs=68.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-----CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.    +.. ...|+.+.+++. +.+.     ++|+|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~-~~~~~~~~~~~D~v  242 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GGE-VFIDFTKEKDIV-GAVLKATDGGAHGV  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TCC-EEEETTTCSCHH-HHHHHHHTSCEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CCc-eEEecCccHhHH-HHHHHHhCCCCCEE
Confidence            567999999999999999999999999999999988776544321    222 124877655655 3332     69999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++|..                  ......+++++.+ +++|.+++..
T Consensus       243 i~~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~~~  272 (347)
T 2hcy_A          243 INVSVSE------------------AAIEASTRYVRAN-GTTVLVGMPA  272 (347)
T ss_dssp             EECSSCH------------------HHHHHHTTSEEEE-EEEEECCCCT
T ss_pred             EECCCcH------------------HHHHHHHHHHhcC-CEEEEEeCCC
Confidence            9999741                  1223333444432 5888887643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.14  E-value=1.6e-06  Score=79.16  Aligned_cols=107  Identities=16%  Similarity=0.123  Sum_probs=71.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|+|+|+ |.||+.+++.|...|++|++++|++++.+...+.. +..   +.+|..+.++++ +.+.++|+||++
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-g~~---~~~~~~~~~~l~-~~~~~~DvVi~~  236 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-GGR---VITLTATEANIK-KSVQHADLLIGA  236 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-TTS---EEEEECCHHHHH-HHHHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-Cce---EEEecCCHHHHH-HHHhCCCEEEEC
Confidence            456789999998 99999999999999999999999987765543211 222   355767777777 778899999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ++....     ... ..  +    ....++.++.+ ..||.+|+..
T Consensus       237 ~g~~~~-----~~~-~l--i----~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          237 VLVPGA-----KAP-KL--V----TRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             CC-------------CC--S----CHHHHTTSCTT-CEEEECC---
T ss_pred             CCCCcc-----ccc-hh--H----HHHHHHhhcCC-CEEEEEecCC
Confidence            985320     000 00  0    13345555543 5888888653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.05  E-value=8.3e-06  Score=73.62  Aligned_cols=99  Identities=20%  Similarity=0.161  Sum_probs=68.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      .+++|||+||+|.+|..+++.+...|++|++++|++++.+...+.. +  +.. ..|..+.+++. +.+     .++|+|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-g--~~~-~~d~~~~~~~~-~~~~~~~~~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-G--FDD-AFNYKEESDLT-AALKRCFPNGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-C--CSE-EEETTSCSCSH-HHHHHHCTTCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-C--Cce-EEecCCHHHHH-HHHHHHhCCCCcEE
Confidence            4689999999999999999999999999999999987766554221 2  221 23777665555 333     369999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+|+|..                   .....+++++. .++++.++...
T Consensus       230 i~~~g~~-------------------~~~~~~~~l~~-~G~~v~~G~~~  258 (345)
T 2j3h_A          230 FENVGGK-------------------MLDAVLVNMNM-HGRIAVCGMIS  258 (345)
T ss_dssp             EESSCHH-------------------HHHHHHTTEEE-EEEEEECCCGG
T ss_pred             EECCCHH-------------------HHHHHHHHHhc-CCEEEEEcccc
Confidence            9999731                   22344444443 25888876544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.04  E-value=2.6e-06  Score=76.34  Aligned_cols=98  Identities=14%  Similarity=0.095  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.  +..  . ..|..+.+..+ .+.     .++|+|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~--g~~--~-~~~~~~~~~~~-~~~~~~~~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA--GAW--Q-VINYREEDLVE-RLKEITGGKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--TCS--E-EEETTTSCHHH-HHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--CCC--E-EEECCCccHHH-HHHHHhCCCCceEE
Confidence            468999999999999999999999999999999998776554421  221  1 24666654333 222     269999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+|+|..                   .....++.++.+ +++|.+++..
T Consensus       214 i~~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~  242 (327)
T 1qor_A          214 YDSVGRD-------------------TWERSLDCLQRR-GLMVSFGNSS  242 (327)
T ss_dssp             EECSCGG-------------------GHHHHHHTEEEE-EEEEECCCTT
T ss_pred             EECCchH-------------------HHHHHHHHhcCC-CEEEEEecCC
Confidence            9999821                   124455666543 5888887654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.03  E-value=8.8e-07  Score=78.05  Aligned_cols=78  Identities=23%  Similarity=0.233  Sum_probs=55.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCC---ceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE---TLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~---~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++.+++++|||++ ++|++++..|++.| +|++++|+.++.+.+.+.....   .. .+.+|+.+   +. +.+.++|+|
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~---~~-~~~~~~Dil  197 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSG---LD-VDLDGVDII  197 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEEC---TT-CCCTTCCEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEee---HH-HhhCCCCEE
Confidence            4567899999985 99999999999999 9999999987766654321110   00 11234433   24 456789999


Q ss_pred             EEcCCCCC
Q 019935          156 ICCTGTTA  163 (333)
Q Consensus       156 i~~a~~~~  163 (333)
                      |||++...
T Consensus       198 Vn~ag~~~  205 (287)
T 1nvt_A          198 INATPIGM  205 (287)
T ss_dssp             EECSCTTC
T ss_pred             EECCCCCC
Confidence            99999764

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.00  E-value=5.4e-06  Score=75.15  Aligned_cols=97  Identities=21%  Similarity=0.231  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhhc--CCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFE--GVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~~--~~d~vi  156 (333)
                      .+++|||+||+|++|..+++.+...|++|++++|++++.+...+.    +... ..|..+.+..++  +...  ++|+||
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAHE-VFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CCCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            467999999999999999999999999999999998776644321    2221 246665443320  1222  699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      +|+|..                   .....++.++.+ +++|.++.
T Consensus       245 ~~~G~~-------------------~~~~~~~~l~~~-G~iv~~g~  270 (351)
T 1yb5_A          245 EMLANV-------------------NLSKDLSLLSHG-GRVIVVGS  270 (351)
T ss_dssp             ESCHHH-------------------HHHHHHHHEEEE-EEEEECCC
T ss_pred             ECCChH-------------------HHHHHHHhccCC-CEEEEEec
Confidence            999731                   123445555543 58887764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.98  E-value=4.2e-06  Score=75.20  Aligned_cols=98  Identities=15%  Similarity=0.122  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.  +..  . ..|..+.+..+ .+   .  .++|+|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--g~~--~-~~d~~~~~~~~-~i~~~~~~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL--GCH--H-TINYSTQDFAE-VVREITGGKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--TCS--E-EEETTTSCHHH-HHHHHHTTCCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCC--E-EEECCCHHHHH-HHHHHhCCCCCeEE
Confidence            467999999999999999999999999999999998766554321  222  1 24666644333 22   2  269999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+|+|..                   .....++.++.+ +++|.++...
T Consensus       219 i~~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~  247 (333)
T 1wly_A          219 YDSIGKD-------------------TLQKSLDCLRPR-GMCAAYGHAS  247 (333)
T ss_dssp             EECSCTT-------------------THHHHHHTEEEE-EEEEECCCTT
T ss_pred             EECCcHH-------------------HHHHHHHhhccC-CEEEEEecCC
Confidence            9999841                   124455666543 4888877543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.98  E-value=4.4e-06  Score=71.15  Aligned_cols=72  Identities=19%  Similarity=0.190  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |++++++++..+.+.     .++.++.+|.+|++.+++..+.++|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            358999997 9999999999999999 999999988766553     35889999999998887333789999998764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.96  E-value=8.5e-06  Score=73.30  Aligned_cols=100  Identities=16%  Similarity=0.211  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~vi  156 (333)
                      .+++|||+||+|.||..+++.+...|++|++++|++++.+.+....   ++.. ..|..+.+..+ .+.    +++|+||
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~-~~~~~~~~~~~-~~~~~~~~~~d~vi  223 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDG-AIDYKNEDLAA-GLKRECPKGIDVFF  223 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSE-EEETTTSCHHH-HHHHHCTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCE-EEECCCHHHHH-HHHHhcCCCceEEE
Confidence            5689999999999999999999999999999999988777662221   2221 23665544322 222    3699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +|+|..                   .....++.++.+ +++|.++....
T Consensus       224 ~~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~~  252 (336)
T 4b7c_A          224 DNVGGE-------------------ILDTVLTRIAFK-ARIVLCGAISQ  252 (336)
T ss_dssp             ESSCHH-------------------HHHHHHTTEEEE-EEEEECCCGGG
T ss_pred             ECCCcc-------------------hHHHHHHHHhhC-CEEEEEeeccc
Confidence            999731                   223344445443 58898876654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.95  E-value=5.6e-06  Score=75.10  Aligned_cols=98  Identities=18%  Similarity=0.175  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~v  155 (333)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+...+.  +  .. ...|..+.+..+ .+   .  .++|+|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--g--~~-~~~~~~~~~~~~-~~~~~~~~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL--G--AA-AGFNYKKEDFSE-ATLKFTKGAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--T--CS-EEEETTTSCHHH-HHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--C--Cc-EEEecCChHHHH-HHHHHhcCCCceEE
Confidence            467999999999999999999999999999999998776654321  2  22 124666544333 22   2  269999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+|+|..                   .....++.++.+ ++++.++...
T Consensus       236 i~~~G~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  264 (354)
T 2j8z_A          236 LDCIGGS-------------------YWEKNVNCLALD-GRWVLYGLMG  264 (354)
T ss_dssp             EESSCGG-------------------GHHHHHHHEEEE-EEEEECCCTT
T ss_pred             EECCCch-------------------HHHHHHHhccCC-CEEEEEeccC
Confidence            9999842                   123445566543 5888877543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.95  E-value=3.4e-06  Score=70.65  Aligned_cols=73  Identities=15%  Similarity=0.105  Sum_probs=51.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|+|+||+|++|+++++.|++.|++|++++|++++.+.+.+.. ...+.  ..|+. ..++. +.++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~--~~~~~-~~~~~-~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY-RRIAG--DASIT-GMKNE-DAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH-HHHHS--SCCEE-EEEHH-HHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccccc--cCCCC-hhhHH-HHHhcCCEEEEeCC
Confidence            37999999999999999999999999999999987765543211 00000  01222 23445 56778999999985

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.94  E-value=5.7e-06  Score=72.20  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=54.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++++|+|+ |++|++++..|++.|++|++++|+.++.+.+.+.... ..+..  .|+   +++. +  .++|+||+
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~-~--~~~DivIn  186 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIP-L--QTYDLVIN  186 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCC-C--SCCSEEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhc-c--CCCCEEEE
Confidence            456789999997 8999999999999999999999998887766533211 12222  232   2222 1  47999999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +++...
T Consensus       187 ~t~~~~  192 (272)
T 1p77_A          187 ATSAGL  192 (272)
T ss_dssp             CCCC--
T ss_pred             CCCCCC
Confidence            998754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.93  E-value=1.1e-05  Score=73.13  Aligned_cols=98  Identities=14%  Similarity=0.158  Sum_probs=67.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~vi~  157 (333)
                      ++|||+||+|+||..+++.+...|+ +|++++|++++.+.+.+..   ++. ...|..+.+..+ .+.    .++|+||+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~-~~~d~~~~~~~~-~~~~~~~~~~d~vi~  236 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD-AAINYKKDNVAE-QLRESCPAGVDVYFD  236 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS-EEEETTTSCHHH-HHHHHCTTCEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc-eEEecCchHHHH-HHHHhcCCCCCEEEE
Confidence            8999999999999999999999999 9999999987766554312   222 124666643222 221    26999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |+|.                   ......++.++.+ +++|.++....
T Consensus       237 ~~G~-------------------~~~~~~~~~l~~~-G~iv~~G~~~~  264 (357)
T 2zb4_A          237 NVGG-------------------NISDTVISQMNEN-SHIILCGQISQ  264 (357)
T ss_dssp             SCCH-------------------HHHHHHHHTEEEE-EEEEECCCGGG
T ss_pred             CCCH-------------------HHHHHHHHHhccC-cEEEEECCccc
Confidence            9973                   1234455555543 58888876543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.93  E-value=3e-06  Score=74.27  Aligned_cols=80  Identities=20%  Similarity=0.276  Sum_probs=59.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +..+++++|+|+ |++|++++..|++.|. +|++++|+.++.+++.+...  ...+.+...+   .+++. +.+.++|+|
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~---~~~l~-~~l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIE-DVIAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC---STTHH-HHHHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC---HHHHH-HHHhcCCEE
Confidence            467889999997 9999999999999998 79999999988776643321  1122232333   24555 667789999


Q ss_pred             EEcCCCCC
Q 019935          156 ICCTGTTA  163 (333)
Q Consensus       156 i~~a~~~~  163 (333)
                      ||+.....
T Consensus       199 InaTp~Gm  206 (283)
T 3jyo_A          199 VNATPMGM  206 (283)
T ss_dssp             EECSSTTS
T ss_pred             EECCCCCC
Confidence            99987654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.92  E-value=2.3e-06  Score=76.89  Aligned_cols=115  Identities=9%  Similarity=0.005  Sum_probs=70.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+++|.|+|++|++|+.++..|+..|  .+|+++++++++.+..........  +...++.-..++. +.++++|+||.+
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~-~al~dADvVvit   83 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIK-EALTDAKYIVSS   83 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHH-HHHTTEEEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHH-HHhCCCCEEEEc
Confidence            45799999999999999999999988  589999998776543211000000  0001111123444 678899999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC--eEEEEe
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVS  201 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~--~~v~~S  201 (333)
                      ||...-+   -..-.+.+..|......+++++++ +.+  .++.+|
T Consensus        84 aG~p~kp---G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           84 GGAPRKE---GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             cCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            9864311   111123466788888888887643 332  345554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.91  E-value=3.7e-06  Score=65.93  Aligned_cols=71  Identities=14%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +++|+|.|+ |.+|+.+++.|.+.|++|++++|++++.+.+.+..   ++...     ..+++. +.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~---~~~~~-----~~~~~~-~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY---EYEYV-----LINDID-SLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH---TCEEE-----ECSCHH-HHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh---CCceE-----eecCHH-HHhcCCCEEEEeCCC
Confidence            679999995 99999999999999999999999998877654432   12221     234556 677899999999875


Q ss_pred             C
Q 019935          162 T  162 (333)
Q Consensus       162 ~  162 (333)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.88  E-value=1.2e-05  Score=76.77  Aligned_cols=75  Identities=23%  Similarity=0.182  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchh-hhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA-IFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~-~~~~~d~vi~  157 (333)
                      ...+++++|||| |++|++++..|++.|++|++++|+.++.+.+.... ...+  +  ++.|   +. . ....+|+|||
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-~~~~--~--~~~d---l~-~~~~~~~DilVN  430 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-GGKA--L--SLTD---LD-NYHPEDGMVLAN  430 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-TC-C--E--ETTT---TT-TC--CCSEEEEE
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCce--e--eHHH---hh-hccccCceEEEE
Confidence            356789999999 79999999999999999999999988877765433 1111  1  2222   33 2 2345899999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      |+|...
T Consensus       431 ~agvg~  436 (523)
T 2o7s_A          431 TTSMGM  436 (523)
T ss_dssp             CSSTTC
T ss_pred             CCCCCC
Confidence            999753

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.87  E-value=1.1e-05  Score=71.33  Aligned_cols=78  Identities=24%  Similarity=0.250  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++|+|+|+ |++|++++..|++.|+ +|++++|+.++.+.+.+......-.++  +   .+++. +.+.++|+||+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~---~~~~~-~~~~~aDivIn  210 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--S---LAEAE-TRLAEYDIIIN  210 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--C---HHHHH-HTGGGCSEEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--e---HHHHH-hhhccCCEEEE
Confidence            456789999997 8999999999999997 999999999888776543311100111  1   12344 56678999999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +++...
T Consensus       211 ~t~~~~  216 (297)
T 2egg_A          211 TTSVGM  216 (297)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.85  E-value=1.1e-05  Score=71.43  Aligned_cols=83  Identities=17%  Similarity=0.190  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC---cchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~---~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      +..++++||+|+ |++|++++..|++.|. +|++++|+   .++++++.+... ..+..+...++.+.+.+. +.+.++|
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~-~~l~~~D  222 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFT-EALASAD  222 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH-HHHHHCS
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhH-hhccCce
Confidence            467889999997 9999999999999997 89999999   666666543221 112223333443322223 4567899


Q ss_pred             EEEEcCCCCC
Q 019935          154 HVICCTGTTA  163 (333)
Q Consensus       154 ~vi~~a~~~~  163 (333)
                      +|||+.....
T Consensus       223 iIINaTp~Gm  232 (312)
T 3t4e_A          223 ILTNGTKVGM  232 (312)
T ss_dssp             EEEECSSTTS
T ss_pred             EEEECCcCCC
Confidence            9999987654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.80  E-value=1.6e-05  Score=73.46  Aligned_cols=73  Identities=29%  Similarity=0.302  Sum_probs=63.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|+|+|. |.+|+.+++.|.+.|++|++++++++..+.+.    ..++.++.+|.++++.+++.-++++|+||.+.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            57999996 99999999999999999999999998887765    346788999999999888333788999998874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.79  E-value=1.5e-05  Score=71.85  Aligned_cols=99  Identities=14%  Similarity=0.112  Sum_probs=68.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh--cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~--~~~d~vi  156 (333)
                      .+++|||+|++|.+|..+++.+...|++|++++|++++.+...+.  +  ... ..|..+.+..+.  +..  .++|+||
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~--g--a~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL--G--ADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--T--CSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--C--CCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            467999999999999999999999999999999998776655421  2  221 246665432220  222  2699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      +++| ..                  .....+++++.+ +++|.+++..
T Consensus       241 ~~~g-~~------------------~~~~~~~~l~~~-G~~v~~g~~~  268 (343)
T 2eih_A          241 DHTG-AL------------------YFEGVIKATANG-GRIAIAGASS  268 (343)
T ss_dssp             ESSC-SS------------------SHHHHHHHEEEE-EEEEESSCCC
T ss_pred             ECCC-HH------------------HHHHHHHhhccC-CEEEEEecCC
Confidence            9998 21                  124556666542 4888877654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.79  E-value=1.6e-05  Score=72.09  Aligned_cols=98  Identities=14%  Similarity=0.170  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~vi  156 (333)
                      .+++|||+||+|.+|..+++.+...|++|++++|++++.+...+.  +...   ..|..+.+..+ .+.    .++|+||
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--Ga~~---~~~~~~~~~~~-~~~~~~~~g~Dvvi  240 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL--GAKR---GINYRSEDFAA-VIKAETGQGVDIIL  240 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--TCSE---EEETTTSCHHH-HHHHHHSSCEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--CCCE---EEeCCchHHHH-HHHHHhCCCceEEE
Confidence            567999999999999999999999999999999998877655432  2211   23555543322 222    3799999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      +++|..                   .....++.++.+ ++++.++...
T Consensus       241 d~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~  268 (353)
T 4dup_A          241 DMIGAA-------------------YFERNIASLAKD-GCLSIIAFLG  268 (353)
T ss_dssp             ESCCGG-------------------GHHHHHHTEEEE-EEEEECCCTT
T ss_pred             ECCCHH-------------------HHHHHHHHhccC-CEEEEEEecC
Confidence            999742                   123445555542 5888877554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.75  E-value=7.2e-05  Score=65.03  Aligned_cols=75  Identities=21%  Similarity=0.288  Sum_probs=55.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++++|+|+ |++|++++..|++.|. +|++++|+.++.+++.+......+.++  ++   +++. .  .++|+|||
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~---~~l~-~--~~~DivIn  187 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RY---EALE-G--QSFDIVVN  187 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CS---GGGT-T--CCCSEEEE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eH---HHhc-c--cCCCEEEE
Confidence            457889999997 8999999999999995 999999999888877544322123332  22   2232 2  57899999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +....
T Consensus       188 aTp~g  192 (272)
T 3pwz_A          188 ATSAS  192 (272)
T ss_dssp             CSSGG
T ss_pred             CCCCC
Confidence            98664

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.75  E-value=1.6e-05  Score=74.60  Aligned_cols=75  Identities=20%  Similarity=0.343  Sum_probs=63.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .|+|+|.|+ |.+|+++++.|.++|++|++++++++..+.+..   .-++.++.||-++++.++++-++.+|.+|-+.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~---~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQD---KYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH---HSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---hcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            468999996 999999999999999999999999988877653   236788999999999998555788999987653

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.72  E-value=1.1e-05  Score=73.43  Aligned_cols=77  Identities=13%  Similarity=0.149  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+++|+|+|+ |.+|+.+++.|...|++|++++|++++.+.+.+.. ...+..+   ..+.+++. +.+.++|+||+++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~~DvVI~~~  238 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-GSRVELL---YSNSAEIE-TAVAEADLLIGAV  238 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGSEEE---ECCHHHHH-HHHHTCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh-CceeEee---eCCHHHHH-HHHcCCCEEEECC
Confidence            45589999998 99999999999999999999999988776554221 1122221   12333455 5677899999999


Q ss_pred             CCC
Q 019935          160 GTT  162 (333)
Q Consensus       160 ~~~  162 (333)
                      +..
T Consensus       239 ~~~  241 (361)
T 1pjc_A          239 LVP  241 (361)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            763

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.71  E-value=0.00012  Score=65.35  Aligned_cols=109  Identities=17%  Similarity=0.198  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhh----hhccCC--CCceEEEEccCCCcCCCchhhhcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATT----LFGKQD--EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~----~~~~~~--~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ..++|.|+|+ |++|..++..|+..|.  +|+++++++++.+.    +.....  ...+.+...|       . +.++++
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~-~a~~~a   74 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------Y-EDCKDA   74 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------H-HHhCCC
Confidence            3568999996 9999999999999986  89999998876554    221100  1233433222       2 457889


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      |+||.++|...-+   -..-.+.+..|......+++++.. .. ..++.+|
T Consensus        75 DvVvi~ag~p~kp---G~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           75 DIVCICAGANQKP---GETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             SEEEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEEecccCCCC---CccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            9999999864311   111123466788888888886633 22 2555544

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.71  E-value=2.2e-05  Score=70.29  Aligned_cols=98  Identities=15%  Similarity=0.116  Sum_probs=66.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~v  155 (333)
                      .+++|||+||+|.+|..+++.+...|++|+++++++++.+...+.  +.. .  ..|..+.+..+ .+   .  .++|+|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--Ga~-~--~~~~~~~~~~~-~~~~~~~~~g~Dvv  213 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL--GAW-E--TIDYSHEDVAK-RVLELTDGKKCPVV  213 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH--TCS-E--EEETTTSCHHH-HHHHHTTTCCEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCC-E--EEeCCCccHHH-HHHHHhCCCCceEE
Confidence            567999999999999999999999999999999998777655432  211 1  23555543322 22   2  269999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++|..                   .....++.++. .+++|.++...
T Consensus       214 id~~g~~-------------------~~~~~~~~l~~-~G~iv~~g~~~  242 (325)
T 3jyn_A          214 YDGVGQD-------------------TWLTSLDSVAP-RGLVVSFGNAS  242 (325)
T ss_dssp             EESSCGG-------------------GHHHHHTTEEE-EEEEEECCCTT
T ss_pred             EECCChH-------------------HHHHHHHHhcC-CCEEEEEecCC
Confidence            9999741                   12334445544 35888877544

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.70  E-value=0.00013  Score=65.10  Aligned_cols=111  Identities=10%  Similarity=0.133  Sum_probs=64.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~  151 (333)
                      ...+++|.|+|+ |++|+.++..|+..|.  +++++++++++.+.......     ...+.+...|       . +.+.+
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~-~a~~~   76 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------Y-SDAKD   76 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------G-GGGTT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------H-HHhcC
Confidence            445679999996 9999999999999886  89999998876553211000     1123332221       2 46789


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +|+||++||...-+   -..-.+.++.|..-...+++++.. .- ..++.+|
T Consensus        77 aDiVvi~ag~~~kp---G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           77 ADLVVITAGAPQKP---GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CSEEEECCCCC-------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CCEEEECCCCCCCC---CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99999999874322   122345677888888888887743 32 3455544

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.69  E-value=5.8e-05  Score=68.69  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc---chhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~  154 (333)
                      .+++|||+|+ |.+|..+++.+...|++|+++++++   ++.+...+    -++..+  | .+  ++.+.+.   .++|+
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~----~ga~~v--~-~~--~~~~~~~~~~~~~d~  249 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE----TKTNYY--N-SS--NGYDKLKDSVGKFDV  249 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH----HTCEEE--E-CT--TCSHHHHHHHCCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH----hCCcee--c-hH--HHHHHHHHhCCCCCE
Confidence            3789999999 9999999999999999999999987   66544331    234544  6 55  3331222   47999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||+++|.
T Consensus       250 vid~~g~  256 (366)
T 2cdc_A          250 IIDATGA  256 (366)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999985

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.69  E-value=3e-05  Score=70.02  Aligned_cols=75  Identities=19%  Similarity=0.168  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC---Cchhhh--cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~---~~~~~~--~~~d~  154 (333)
                      .+++|||+|++|.||..+++.+... |++|+++++++++.+...+.  +..  . ..|..+.+.   +. +..  .++|+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--g~~--~-~~~~~~~~~~~~~~-~~~~~~~~d~  243 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--GAD--Y-VINASMQDPLAEIR-RITESKGVDA  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--TCS--E-EEETTTSCHHHHHH-HHTTTSCEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--CCC--E-EecCCCccHHHHHH-HHhcCCCceE
Confidence            5679999999999999999999999 99999999988776654321  221  1 236655443   22 223  47999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||+++|.
T Consensus       244 vi~~~g~  250 (347)
T 1jvb_A          244 VIDLNNS  250 (347)
T ss_dssp             EEESCCC
T ss_pred             EEECCCC
Confidence            9999984

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.68  E-value=6.5e-05  Score=63.03  Aligned_cols=67  Identities=18%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|.|+| +|.+|+++++.|++.|++|++++|++++.+.+..    .++.+.        ++. +.++++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g~~~~--------~~~-~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP----SAAQVT--------FQE-EAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB----TTSEEE--------EHH-HHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcee--------cHH-HHHhCCCEEEECCC
Confidence            346899999 7999999999999999999999999887766542    234331        244 56678999999885


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus        93 ~   93 (215)
T 2vns_A           93 R   93 (215)
T ss_dssp             G
T ss_pred             h
Confidence            4

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.67  E-value=0.00025  Score=62.57  Aligned_cols=67  Identities=18%  Similarity=0.121  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |.+||.+.| .|.+|..+++.|+++||+|++++|++++.+.+.+    .++..       .++.. ++.+.+|+||-+..
T Consensus         4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~----~G~~~-------~~s~~-e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK----LGATV-------VENAI-DAITPGGIVFSVLA   70 (297)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT----TTCEE-------CSSGG-GGCCTTCEEEECCS
T ss_pred             CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCeE-------eCCHH-HHHhcCCceeeecc
Confidence            346899998 7999999999999999999999999988877653    33332       23455 66778999998874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.67  E-value=0.00014  Score=64.49  Aligned_cols=111  Identities=16%  Similarity=0.117  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCC------CceEEEEccCCCcCCCchhhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +++|.|+|| |++|..++..|+..|+ +|+++++++++.+........      ....+...     .++  +.++++|+
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-----~d~--~a~~~aD~   73 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-----NNY--ADTANSDV   73 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SCG--GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-----CCH--HHHCCCCE
Confidence            368999998 9999999999999996 999999987665432111001      11111110     122  34778999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~  203 (333)
                      ||.++|...-+.   ....+....|......+.+.++. +...+|.+.|-
T Consensus        74 Vi~a~g~p~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN  120 (309)
T 1ur5_A           74 IVVTSGAPRKPG---MSREDLIKVNADITRACISQAAPLSPNAVIIMVNN  120 (309)
T ss_dssp             EEECCCC-----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred             EEEcCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence            999998743111   11122345677777788886644 44555544443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.63  E-value=0.0001  Score=66.60  Aligned_cols=97  Identities=11%  Similarity=0.163  Sum_probs=66.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~vi~  157 (333)
                      ++|||+||+|.+|...++.+...|++|+++++++++.+.+.+.  +  +.. ..|..+.+..+ .+   .  .++|+||+
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~--G--a~~-~~~~~~~~~~~-~v~~~~~~~g~D~vid  239 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI--G--AAH-VLNEKAPDFEA-TLREVMKAEQPRIFLD  239 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH--T--CSE-EEETTSTTHHH-HHHHHHHHHCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--C--CCE-EEECCcHHHHH-HHHHHhcCCCCcEEEE
Confidence            7899999999999999999999999999999988877655432  2  211 13444433222 22   1  37999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      ++|..                   .....+++++.+ +++|.++....
T Consensus       240 ~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~~  267 (349)
T 3pi7_A          240 AVTGP-------------------LASAIFNAMPKR-ARWIIYGRLDP  267 (349)
T ss_dssp             SSCHH-------------------HHHHHHHHSCTT-CEEEECCCSCC
T ss_pred             CCCCh-------------------hHHHHHhhhcCC-CEEEEEeccCC
Confidence            99741                   124455666653 68888775543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.62  E-value=4.7e-05  Score=66.33  Aligned_cols=72  Identities=11%  Similarity=0.118  Sum_probs=53.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++++|+|+ |++|++++..|++.|+ +|++++|+.++.+.+..     ++..+.     .+++. +.+.++|+||+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-----~~~~~~-----~~~~~-~~~~~aDiVIn  181 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-----NINKIN-----LSHAE-SHLDEFDIIIN  181 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-----CCEEEC-----HHHHH-HTGGGCSEEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----hccccc-----HhhHH-HHhcCCCEEEE
Confidence            456789999996 8999999999999998 89999999988776642     222221     12334 45678999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +....
T Consensus       182 aTp~G  186 (277)
T 3don_A          182 TTPAG  186 (277)
T ss_dssp             CCC--
T ss_pred             CccCC
Confidence            98654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.62  E-value=0.00057  Score=60.86  Aligned_cols=67  Identities=15%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|.|.| .|.+|..+++.|++.|++|++++|++++.+.+.+.    ++..       ..+++ ++++++|+||-+..
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----g~~~-------~~~~~-e~~~~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----GATI-------HEQAR-AAARDADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCEE-------ESSHH-HHHTTCSEEEECCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----CCEe-------eCCHH-HHHhcCCEEEEECC
Confidence            457899998 59999999999999999999999999888777632    3322       23455 67788999998874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.61  E-value=8e-05  Score=65.05  Aligned_cols=74  Identities=19%  Similarity=0.199  Sum_probs=53.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      +..+++++|+|+ |++|++++..|++.|+ +|++++|+.++.+++.+.... ..+..+  ++   +++    ..++|+||
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~---~~l----~~~aDiII  192 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AF---EQL----KQSYDVII  192 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EG---GGC----CSCEEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eH---HHh----cCCCCEEE
Confidence            457889999997 8999999999999995 999999999887776543211 123333  22   112    15689999


Q ss_pred             EcCCCC
Q 019935          157 CCTGTT  162 (333)
Q Consensus       157 ~~a~~~  162 (333)
                      |+....
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            998764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.61  E-value=4.3e-05  Score=68.79  Aligned_cols=99  Identities=14%  Similarity=0.183  Sum_probs=66.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      ..+++|||+||+|.+|..+++.+...|++|+++++++++.+.+.+.  +...   ..|..+.+..+ .+.     .++|+
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--ga~~---~~~~~~~~~~~-~~~~~~~~~g~Dv  216 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL--GAAY---VIDTSTAPLYE-TVMELTNGIGADA  216 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--TCSE---EEETTTSCHHH-HHHHHTTTSCEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC--CCcE---EEeCCcccHHH-HHHHHhCCCCCcE
Confidence            3567999999999999999999988999999999998877655432  2221   13554443222 221     27999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ||+++|..                   .....+++++.+ +++|.++...
T Consensus       217 vid~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  246 (340)
T 3gms_A          217 AIDSIGGP-------------------DGNELAFSLRPN-GHFLTIGLLS  246 (340)
T ss_dssp             EEESSCHH-------------------HHHHHHHTEEEE-EEEEECCCTT
T ss_pred             EEECCCCh-------------------hHHHHHHHhcCC-CEEEEEeecC
Confidence            99999742                   123344555543 5888877543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.60  E-value=3.2e-05  Score=68.39  Aligned_cols=97  Identities=15%  Similarity=0.203  Sum_probs=62.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+++|||+|++|.+|..+++.+...|++|+++++++++.+...+.    ++.. ..|..+.+++. +.+.++|+||+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~-~~~~~~~~~~~-~~~~~~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GAEE-AATYAEVPERA-KAWGGLDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TCSE-EEEGGGHHHHH-HHTTSEEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCCE-EEECCcchhHH-HHhcCceEEEE-CC
Confidence            567999999999999999999999999999999988776654321    2221 13443302233 33478999999 87


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ..                   .....+++++.+ ++++.++...
T Consensus       198 ~~-------------------~~~~~~~~l~~~-G~~v~~g~~~  221 (302)
T 1iz0_A          198 GK-------------------EVEESLGLLAHG-GRLVYIGAAE  221 (302)
T ss_dssp             CT-------------------THHHHHTTEEEE-EEEEEC----
T ss_pred             HH-------------------HHHHHHHhhccC-CEEEEEeCCC
Confidence            41                   123445555443 4888776543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.59  E-value=4.5e-05  Score=68.46  Aligned_cols=99  Identities=16%  Similarity=0.153  Sum_probs=67.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~  154 (333)
                      ..+++|||+||+|.+|..+++.+...|++|+++++++++.+...+.  +  ... ..|..+.+..+ .+   .  .++|+
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--g--a~~-~~~~~~~~~~~-~~~~~~~~~g~D~  220 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY--G--AEY-LINASKEDILR-QVLKFTNGKGVDA  220 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--T--CSE-EEETTTSCHHH-HHHHHTTTSCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--C--CcE-EEeCCCchHHH-HHHHHhCCCCceE
Confidence            3567999999999999999999999999999999988777654432  2  211 23554433222 22   1  26999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ||+++|..                   .....++.++.+ +++|.++...
T Consensus       221 vid~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  250 (334)
T 3qwb_A          221 SFDSVGKD-------------------TFEISLAALKRK-GVFVSFGNAS  250 (334)
T ss_dssp             EEECCGGG-------------------GHHHHHHHEEEE-EEEEECCCTT
T ss_pred             EEECCChH-------------------HHHHHHHHhccC-CEEEEEcCCC
Confidence            99999841                   124455666543 5888876543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.59  E-value=5.5e-05  Score=68.77  Aligned_cols=99  Identities=20%  Similarity=0.225  Sum_probs=68.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h-cCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~-~~~d~vi  156 (333)
                      .+++|||+||+|.+|..+++.+...|++|+++++++++.+...+.  +  +.. ..|..+.+ +.+.+   . .++|+||
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~--G--a~~-~~~~~~~~-~~~~~~~~~~~g~D~vi  236 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL--G--CDR-PINYKTEP-VGTVLKQEYPEGVDVVY  236 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--T--CSE-EEETTTSC-HHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc--C--CcE-EEecCChh-HHHHHHHhcCCCCCEEE
Confidence            467999999999999999999999999999999998776655431  2  221 13544432 32111   1 3699999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      +++|.                   ......+++++.+ +++|.+++...
T Consensus       237 d~~g~-------------------~~~~~~~~~l~~~-G~iv~~g~~~~  265 (362)
T 2c0c_A          237 ESVGG-------------------AMFDLAVDALATK-GRLIVIGFISG  265 (362)
T ss_dssp             ECSCT-------------------HHHHHHHHHEEEE-EEEEECCCGGG
T ss_pred             ECCCH-------------------HHHHHHHHHHhcC-CEEEEEeCCCC
Confidence            99973                   1234566666553 58998887654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.57  E-value=0.0002  Score=62.75  Aligned_cols=67  Identities=18%  Similarity=0.216  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|.|.|++|.+|+.++..|++.|++|++++|++++.+.+.+    .++     +..   +.. +.+.++|+||.+..
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g~-----~~~---~~~-~~~~~aDvVi~av~   76 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG----MGI-----PLT---DGD-GWIDEADVVVLALP   76 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----TTC-----CCC---CSS-GGGGTCSEEEECSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----cCC-----CcC---CHH-HHhcCCCEEEEcCC
Confidence            34689999999999999999999999999999999887766543    122     222   344 56778999999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.57  E-value=3e-05  Score=69.68  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.    ..++.++.+|.+|++.+++.-++++|.||.+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----RSGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----HTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----hCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            458999996 9999999999999999 999999998877 54    457889999999999888333789999998764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.54  E-value=0.00032  Score=61.94  Aligned_cols=66  Identities=15%  Similarity=0.155  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |++|.+.| .|.+|+.+++.|++.||+|++++|++++.+.+.+    .+++.       .++.. ++.+.+|+||-+..
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~----~Ga~~-------a~s~~-e~~~~~dvv~~~l~   68 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA----AGASA-------ARSAR-DAVQGADVVISMLP   68 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH----TTCEE-------CSSHH-HHHTTCSEEEECCS
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH----cCCEE-------cCCHH-HHHhcCCceeecCC
Confidence            57899999 7999999999999999999999999999888763    23322       23555 67789999999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.54  E-value=5.7e-05  Score=69.03  Aligned_cols=77  Identities=14%  Similarity=0.070  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|+|+|+ |.||+.+++.|...|++|++++|++++.+.+.+.. +..+.   .|..+..++. +.+.++|+||++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-g~~~~---~~~~~~~~l~-~~l~~aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-CGRIH---TRYSSAYELE-GAVKRADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-TTSSE---EEECCHHHHH-HHHHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-CCeeE---eccCCHHHHH-HHHcCCCEEEEC
Confidence            467889999998 99999999999999999999999987765543211 22221   2233344566 677889999999


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      ++.
T Consensus       239 ~~~  241 (377)
T 2vhw_A          239 VLV  241 (377)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.49  E-value=0.00013  Score=66.31  Aligned_cols=99  Identities=18%  Similarity=0.234  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|||+|+ |.+|..+++.+...|++|+++++++++.+...+.. +  +.. ..|..+.+.+. +...++|+||+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-G--a~~-v~~~~~~~~~~-~~~~~~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-G--ADS-FLVSRDQEQMQ-AAAGTLDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-C--CSE-EEETTCHHHHH-HTTTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-C--Cce-EEeccCHHHHH-HhhCCCCEEEECCC
Confidence            5679999996 99999999999999999999999987766544221 2  211 23555554455 45568999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ...           .       ....+++++.+ +++|.+++..
T Consensus       261 ~~~-----------~-------~~~~~~~l~~~-G~iv~~g~~~  285 (366)
T 1yqd_A          261 AVH-----------P-------LLPLFGLLKSH-GKLILVGAPE  285 (366)
T ss_dssp             SCC-----------C-------SHHHHHHEEEE-EEEEECCCCS
T ss_pred             cHH-----------H-------HHHHHHHHhcC-CEEEEEccCC
Confidence            531           0       13445666543 5888887643

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.49  E-value=8.7e-05  Score=66.86  Aligned_cols=97  Identities=19%  Similarity=0.226  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhhc--CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFE--GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~~--~~d~v  155 (333)
                      .+++|||+||+|.+|..+++.+...|++|+++++++++.+...+.  +.. .++  |..  +++.+   +...  ++|+|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--ga~-~v~--~~~--~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV--GAD-IVL--PLE--EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--TCS-EEE--ESS--TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--CCc-EEe--cCc--hhHHHHHHHHhCCCCceEE
Confidence            567999999999999999999999999999999988777654432  211 122  333  22321   1222  69999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++|..                   .....+++++.+ ++++.++...
T Consensus       232 id~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  260 (342)
T 4eye_A          232 VDPIGGP-------------------AFDDAVRTLASE-GRLLVVGFAA  260 (342)
T ss_dssp             EESCC---------------------CHHHHHHTEEEE-EEEEEC----
T ss_pred             EECCchh-------------------HHHHHHHhhcCC-CEEEEEEccC
Confidence            9999842                   123455555543 5888776443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.48  E-value=0.00011  Score=66.11  Aligned_cols=98  Identities=13%  Similarity=0.109  Sum_probs=66.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---hcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~~~~d~vi~  157 (333)
                      .+++|||+|+ |.+|..+++.+...|++|++++|++++.+...+.    ++.. ..|..+.+ +.+.+   ..++|+||+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~-~~d~~~~~-~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GADL-VVNPLKED-AAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCSE-EECTTTSC-HHHHHHHHHSSEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----CCCE-EecCCCcc-HHHHHHHHhCCCCEEEE
Confidence            4679999999 7899999999999999999999998777655421    2222 24666543 32121   257999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ++|..                  ......+++++.+ ++++.++...
T Consensus       237 ~~g~~------------------~~~~~~~~~l~~~-G~~v~~g~~~  264 (339)
T 1rjw_A          237 TAVSK------------------PAFQSAYNSIRRG-GACVLVGLPP  264 (339)
T ss_dssp             SSCCH------------------HHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             CCCCH------------------HHHHHHHHHhhcC-CEEEEecccC
Confidence            99742                  1234556666543 4888876543

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.48  E-value=0.0003  Score=63.42  Aligned_cols=100  Identities=19%  Similarity=0.127  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC------CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN------IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g------~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +++|.|.||||++|+.+++.|++++      .+++.+.+..+..+.+...  .+.+.-. .|+...+.-. +.+.++|+|
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~--~~~l~~~-~~~~~~~~~~-~~~~~~DvV   84 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEH--HPHLTPL-AHRVVEPTEA-AVLGGHDAV   84 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGT--CTTCGGG-TTCBCEECCH-HHHTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhh--ccccccc-ceeeeccCCH-HHhcCCCEE
Confidence            4689999999999999999999887      3777776433221111110  1111000 1211111112 345689999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |.+++...                   +..++.+++.| .++|-+|+..-
T Consensus        85 f~alg~~~-------------------s~~~~~~~~~G-~~vIDlSa~~R  114 (352)
T 2nqt_A           85 FLALPHGH-------------------SAVLAQQLSPE-TLIIDCGADFR  114 (352)
T ss_dssp             EECCTTSC-------------------CHHHHHHSCTT-SEEEECSSTTT
T ss_pred             EECCCCcc-------------------hHHHHHHHhCC-CEEEEECCCcc
Confidence            99997532                   25566655446 47888887653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.47  E-value=0.00013  Score=62.64  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=54.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhhhhhccC----CCCceEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQ----DEETLQVCK  135 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~~~~~~----~~~~~~~v~  135 (333)
                      +.+++|+|.|+ |++|+++++.|+..|. ++++++++.                   .+.+.+.+..    +.-.++.+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            34578999995 9999999999999996 899999986                   4444332211    122344555


Q ss_pred             ccCCCcCCCchhhhcCCcEEEEcCC
Q 019935          136 GDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       136 ~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++.+ +.+. +.+.++|+||.+..
T Consensus       108 ~~~~~-~~~~-~~~~~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELA-ALIAEHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHH-HHHHTSSEEEECCS
T ss_pred             ccCCH-hHHH-HHHhCCCEEEEeCC
Confidence            55543 3445 67889999999864

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.46  E-value=0.00033  Score=61.11  Aligned_cols=71  Identities=23%  Similarity=0.419  Sum_probs=54.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +..+++++|+|+ |+.|++++..|.+.|. +|++++|+.++++++.+.     +..+..     +++. + + ++|+|||
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-----~~~~~~-----~~l~-~-l-~~DivIn  184 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-----FKVISY-----DELS-N-L-KGDVIIN  184 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-----SEEEEH-----HHHT-T-C-CCSEEEE
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-----cCcccH-----HHHH-h-c-cCCEEEE
Confidence            456789999996 8999999999999997 899999999988887542     222211     1233 3 3 6899999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.....
T Consensus       185 aTp~Gm  190 (282)
T 3fbt_A          185 CTPKGM  190 (282)
T ss_dssp             CSSTTS
T ss_pred             CCccCc
Confidence            987643

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.45  E-value=0.001  Score=59.11  Aligned_cols=66  Identities=15%  Similarity=-0.013  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcc-------hhhhhhccCCCCceEEEEccCCCcC-CCchhhhcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPE-------KATTLFGKQDEETLQVCKGDTRNPK-DLDPAIFEG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~-------~~~~~~~~~~~~~~~~v~~D~~d~~-~~~~~~~~~  151 (333)
                      ++++|.|.| .|.+|..++..|++.| ++|++++|+++       ..+.+.    ..++         .. +.. +++++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~----~~g~---------~~~s~~-e~~~~   87 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAA----ELGV---------EPLDDV-AGIAC   87 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHH----HTTC---------EEESSG-GGGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHH----HCCC---------CCCCHH-HHHhc
Confidence            457899999 6999999999999999 99999999872       222222    1122         22 455 56778


Q ss_pred             CcEEEEcCCC
Q 019935          152 VTHVICCTGT  161 (333)
Q Consensus       152 ~d~vi~~a~~  161 (333)
                      +|+||.+...
T Consensus        88 aDvVi~avp~   97 (317)
T 4ezb_A           88 ADVVLSLVVG   97 (317)
T ss_dssp             CSEEEECCCG
T ss_pred             CCEEEEecCC
Confidence            9999998754

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.45  E-value=0.00019  Score=63.56  Aligned_cols=73  Identities=19%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEE--------ccCCCcCCCchhhhcCCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCK--------GDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~--------~D~~d~~~~~~~~~~~~d  153 (333)
                      +++|.|.|+ |.+|..++..|++.|++|++++|++++.+.+.+.    ++....        .+..+.+++. +.+.++|
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d   76 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GLIADFNGEEVVANLPIFSPEEID-HQNEQVD   76 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CEEEEETTEEEEECCCEECGGGCC-TTSCCCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CEEEEeCCCeeEecceeecchhhc-ccCCCCC
Confidence            368999995 9999999999999999999999998777665422    222221        1122222333 3445889


Q ss_pred             EEEEcCC
Q 019935          154 HVICCTG  160 (333)
Q Consensus       154 ~vi~~a~  160 (333)
                      +||.+..
T Consensus        77 ~vi~~v~   83 (316)
T 2ew2_A           77 LIIALTK   83 (316)
T ss_dssp             EEEECSC
T ss_pred             EEEEEec
Confidence            9998875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.44  E-value=0.00013  Score=65.77  Aligned_cols=95  Identities=19%  Similarity=0.207  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~v  155 (333)
                      .+.+|||+||+|.+|..+++.+...|++|+++ +++++.+...+    -++..  .| .+ +++.+.+   .  .++|+|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~----lGa~~--i~-~~-~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD----LGATP--ID-AS-REPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH----HTSEE--EE-TT-SCHHHHHHHHHTTSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH----cCCCE--ec-cC-CCHHHHHHHHhcCCCceEE
Confidence            46799999999999999999999999999999 77776654432    23333  34 33 2333121   1  279999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++|..                   .....++.++.+ +++|.++...
T Consensus       221 id~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~  249 (343)
T 3gaz_A          221 YDTLGGP-------------------VLDASFSAVKRF-GHVVSCLGWG  249 (343)
T ss_dssp             EESSCTH-------------------HHHHHHHHEEEE-EEEEESCCCS
T ss_pred             EECCCcH-------------------HHHHHHHHHhcC-CeEEEEcccC
Confidence            9999731                   234455556543 5788765443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.43  E-value=0.00011  Score=65.63  Aligned_cols=110  Identities=15%  Similarity=0.167  Sum_probs=71.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ..++|.|+|+ |.+|..++..|+..|.  +|++++++.++.+.......     .....++..+     +++  .++++|
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~-----d~~--~~~~aD   89 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK-----DYS--VTANSK   89 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS-----SGG--GGTTEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC-----CHH--HhCCCC
Confidence            4579999997 9999999999999986  89999998766544211100     1111222221     233  477899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +||.+||...-+   -..-.+.+..|..-...+.+++.. .- ..++.+|
T Consensus        90 iVvi~aG~~~kp---G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           90 LVIITAGARQQE---GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             EEEECCSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEccCCCCCC---CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999874322   122345778888888888887643 22 3555555

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.42  E-value=0.00025  Score=61.75  Aligned_cols=73  Identities=29%  Similarity=0.362  Sum_probs=56.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++|+|.|+ |.+|++++..|++.|++|++++|++++.+.+.+..   ++.+     .+  ++. +.+.++|+||++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g~~~-----~~--~~~-~~~~~aDiVi~a  193 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---PLEV-----VN--SPE-EVIDKVQVIVNT  193 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---CEEE-----CS--CGG-GTGGGCSEEEEC
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---CCee-----eh--hHH-hhhcCCCEEEEe
Confidence            456789999995 99999999999999999999999988877765432   2221     11  445 566789999999


Q ss_pred             CCCCC
Q 019935          159 TGTTA  163 (333)
Q Consensus       159 a~~~~  163 (333)
                      .....
T Consensus       194 tp~~~  198 (275)
T 2hk9_A          194 TSVGL  198 (275)
T ss_dssp             SSTTS
T ss_pred             CCCCC
Confidence            97653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.41  E-value=0.0003  Score=62.00  Aligned_cols=82  Identities=13%  Similarity=0.163  Sum_probs=56.3

Q ss_pred             CCCCe-EEEE-cCC-----------------ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--------------
Q 019935           80 SSSKL-VLVA-GGS-----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------------  126 (333)
Q Consensus        80 ~~~~~-vlVt-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--------------  126 (333)
                      +.+++ |||| |+|                 |..|.+++++++.+|++|+++.|..+-. ......              
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~-p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAF-PYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCC-TTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcC-cchhccCccchhhhhccccc
Confidence            35566 8998 455                 8899999999999999999999864311 110000              


Q ss_pred             CCCceEEEEccCCCcCCCchhh-------------------------------------hcCCcEEEEcCCCCC
Q 019935          127 DEETLQVCKGDTRNPKDLDPAI-------------------------------------FEGVTHVICCTGTTA  163 (333)
Q Consensus       127 ~~~~~~~v~~D~~d~~~~~~~~-------------------------------------~~~~d~vi~~a~~~~  163 (333)
                      ...++..+..|+....++. ++                                     +...|++|++|++..
T Consensus       113 ~~~~~~~i~v~v~sa~~m~-~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFA-EALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHH-HHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccceeeeccccHHHHH-HHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            0234556777877766555 22                                     257899999999864

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.41  E-value=0.00028  Score=61.04  Aligned_cols=67  Identities=13%  Similarity=0.186  Sum_probs=51.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +++++|+|+ |+.|++++..|++.|.+|++++|+.++.+.+. .. +  +.++  ++   +++     .++|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-~--~~~~--~~---~~l-----~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-G--CDCF--ME---PPK-----SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-T--CEEE--SS---CCS-----SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-C--CeEe--cH---HHh-----ccCCEEEEcccC
Confidence            789999996 99999999999999999999999999888775 32 1  2222  22   122     268999999876


Q ss_pred             CC
Q 019935          162 TA  163 (333)
Q Consensus       162 ~~  163 (333)
                      ..
T Consensus       183 Gm  184 (269)
T 3phh_A          183 SL  184 (269)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.38  E-value=5.6e-05  Score=60.10  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=48.5

Q ss_pred             ChHHHHHHHHHHhCCCeEEEEEcCcchhhh------hhccCCCCceEEEEccCCCc--CCCchhh-------hcCCcEEE
Q 019935           92 GGVGQLVVASLLSRNIKSRLLLRDPEKATT------LFGKQDEETLQVCKGDTRNP--KDLDPAI-------FEGVTHVI  156 (333)
Q Consensus        92 G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~------~~~~~~~~~~~~v~~D~~d~--~~~~~~~-------~~~~d~vi  156 (333)
                      |.++.++++.|++.|++|++..|+......      .... .+.++..+.+|++++  ++++ ++       +++ |++|
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-~G~~~~~i~~Dv~~~~~~~v~-~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-AGMDYVYIPVDWQNPKVEDVE-AFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-TTCEEEECCCCTTSCCHHHHH-HHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-cCCeEEEecCCCCCCCHHHHH-HHHHHHHhcCCC-CEEE
Confidence            578899999999999999998886543221      1111 144566788999998  7766 33       345 9999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99986

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.35  E-value=0.00046  Score=60.63  Aligned_cols=108  Identities=13%  Similarity=0.134  Sum_probs=69.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhh----hccC--CCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTL----FGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~----~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |+|.|+|+ |.+|.+++..|+..|+  +|+++++++++.+..    ....  -.....+...+     + . +.++++|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~-----d-~-~a~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-----D-Y-SLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES-----C-G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeC-----C-H-HHhCCCCE
Confidence            47999998 9999999999999987  899999998765421    1000  01122222111     2 4 56789999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ||.++|...-+.   ..-.+.+..|..-...+++.+.+ +- ..|+.+|
T Consensus        73 VViaag~~~kpG---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           73 IVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEECCCCCCCSS---CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999998643111   11123456687778888886643 32 3555555

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.35  E-value=0.00044  Score=61.57  Aligned_cols=110  Identities=10%  Similarity=0.101  Sum_probs=69.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ++++|.|+|+ |.+|..++..|+..|+ +|+++++++++.+.......      .....+...+  |   .  +.++++|
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d---~--~a~~~aD   77 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN--D---Y--AAIEGAD   77 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES--S---G--GGGTTCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC--C---H--HHHCCCC
Confidence            4568999998 9999999999999998 99999999876542211000      1122222111  1   2  4578899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +||.++|...-+.   ..-.+.+..|......+++.+.. +. ..++.+|
T Consensus        78 iVIiaag~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           78 VVIVTAGVPRKPG---MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             EEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEEccCcCCCCC---CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence            9999998643211   11234566788888888876643 32 3555544

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.34  E-value=0.00049  Score=59.11  Aligned_cols=70  Identities=21%  Similarity=0.294  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+ +++|.|+ |+.|++++..|++.|. +|++++|+.++.+.+.+..     ...  +   .+++. +.+.++|+||++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-----~~~--~---~~~~~-~~~~~aDiVIna  173 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-----KIF--S---LDQLD-EVVKKAKSLFNT  173 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-----EEE--E---GGGHH-HHHHTCSEEEEC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----ccC--C---HHHHH-hhhcCCCEEEEC
Confidence            456 8999996 9999999999999998 8999999998888775421     111  1   13344 567789999998


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus       174 tp~g  177 (253)
T 3u62_A          174 TSVG  177 (253)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            8654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.33  E-value=0.00017  Score=66.48  Aligned_cols=73  Identities=25%  Similarity=0.270  Sum_probs=54.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++|+|.|+ |.+|+.+++.|...|. +|++++|+.++.+.+....   ++.++  +   .+++. +.+.++|+||.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~~~--~---~~~l~-~~l~~aDvVi~a  234 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEAV--R---FDELV-DHLARSDVVVSA  234 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEEC--C---GGGHH-HHHHTCSEEEEC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCcee--c---HHhHH-HHhcCCCEEEEc
Confidence            56789999997 9999999999999998 8999999987765443221   22221  2   23455 667899999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .+..
T Consensus       235 t~~~  238 (404)
T 1gpj_A          235 TAAP  238 (404)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            8643

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.33  E-value=0.00012  Score=65.58  Aligned_cols=101  Identities=16%  Similarity=0.120  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccC--------CCCceEEEEccCCCcCCCchhhhcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ--------DEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~--------~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .++|.|+|| |.+|..++..|+..|+ +|+++++++++.+......        ...++..       -.+++ +.++++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~-ea~~~a   79 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYE-AALTGA   79 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHH-HHHTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHH-HHhCCC
Confidence            468999998 9999999999999998 9999999987665421100        0111111       12344 578899


Q ss_pred             cEEEEcCCCCCCCCCCCC--CCCCCcchhHHHHHHHHHhcC
Q 019935          153 THVICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~--~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      |+||.++|...-+.....  ...+....|..-...+.+.+.
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~  120 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIK  120 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999986431110000  112234456666677776553

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.32  E-value=0.00041  Score=63.21  Aligned_cols=75  Identities=15%  Similarity=0.197  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh--cCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~--~~~d~vi~  157 (333)
                      ..+.+|||+||+|.+|..+++.+...|++|++++ ++++.+...+ .   ++.. ..|..+.+..+ .+.  .++|+||+
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~-l---Ga~~-v~~~~~~~~~~-~~~~~~g~D~vid  254 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRK-L---GADD-VIDYKSGSVEE-QLKSLKPFDFILD  254 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH-T---TCSE-EEETTSSCHHH-HHHTSCCBSEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHH-c---CCCE-EEECCchHHHH-HHhhcCCCCEEEE
Confidence            3567999999999999999999999999999888 4444443332 1   2221 13554433222 222  47999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      ++|.
T Consensus       255 ~~g~  258 (375)
T 2vn8_A          255 NVGG  258 (375)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9984

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.32  E-value=0.00039  Score=61.92  Aligned_cols=98  Identities=14%  Similarity=0.108  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +++|.|+|+ |++|..++..|+..|.  +|++++.++++.+........     ..+.+. .     +. . +.++++|+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~-----~~-~-~a~~~aDv   77 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A-----GD-Y-SDVKDCDV   77 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--------C-G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E-----CC-H-HHhCCCCE
Confidence            468999998 9999999999999986  899999987665432111101     122221 1     12 3 56889999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      ||.+++...-+.   ..-.+....|+.....+++.+.
T Consensus        78 Vii~~g~p~k~g---~~r~dl~~~n~~i~~~i~~~i~  111 (318)
T 1y6j_A           78 IVVTAGANRKPG---ETRLDLAKKNVMIAKEVTQNIM  111 (318)
T ss_dssp             EEECCCC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCCCC---cCHHHHHHhhHHHHHHHHHHHH
Confidence            999998642110   0111234667777777777664

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.31  E-value=0.0006  Score=60.63  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=63.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhh----ccCC--CCceEEEEccCCCcCCCchhhhcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLF----GKQD--EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~----~~~~--~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      +.++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+...    ....  ...+.+.. |      .. +.++++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~------~~-~al~~a   75 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G------DY-DDCRDA   75 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C------CG-GGTTTC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C------cH-HHhCCC
Confidence            3468999998 9999999999988774  8999999876544321    1000  11233321 1      13 457899


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      |+||.+++....+..   ...+....|..-...+++.++
T Consensus        76 DvViia~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~  111 (316)
T 1ldn_A           76 DLVVICAGANQKPGE---TRLDLVDKNIAIFRSIVESVM  111 (316)
T ss_dssp             SEEEECCSCCCCTTT---CSGGGHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCCCCCCC---CHHHHHHcChHHHHHHHHHHH
Confidence            999999987543211   112345566666677776553

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.31  E-value=0.0016  Score=57.32  Aligned_cols=65  Identities=9%  Similarity=-0.010  Sum_probs=51.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+    .++.+       ..+++ ++++ +|+||.+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~~-------~~~~~-~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AGATL-------ADSVA-DVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TTCEE-------CSSHH-HHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CCCEE-------cCCHH-HHHh-CCEEEEECC
Confidence            45899998 6999999999999999999999999988777653    23322       23455 6667 999999874

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.31  E-value=0.00039  Score=61.37  Aligned_cols=73  Identities=12%  Similarity=0.114  Sum_probs=55.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|+|.|+ |.+|+.+++.|...|++|++++|++++.+.+.+    .+++.+.     ..+++ +.+.++|+||.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~~~~-----~~~l~-~~l~~aDvVi~  221 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGLVPFH-----TDELK-EHVKDIDICIN  221 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCEEEE-----GGGHH-HHSTTCSEEEE
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCCeEEc-----hhhHH-HHhhCCCEEEE
Confidence            3567899999995 999999999999999999999999876554332    1233321     23455 67789999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       222 ~~p~  225 (300)
T 2rir_A          222 TIPS  225 (300)
T ss_dssp             CCSS
T ss_pred             CCCh
Confidence            9864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.31  E-value=0.00018  Score=64.92  Aligned_cols=98  Identities=15%  Similarity=0.150  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|||+|+ |.+|..+++.+...|+ +|++++|++++.+...+.    ++.. ..|..+++ +.+.+.     .++|+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~~-~~~~~~~~-~~~~v~~~~~g~g~D~  239 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GADY-VINPFEED-VVKEVMDITDGNGVDV  239 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCSE-EECTTTSC-HHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCCE-EECCCCcC-HHHHHHHHcCCCCCCE
Confidence            5679999999 9999999999999999 999999998776554321    2221 13554433 321221     26999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ||+++|..                  ......++.++.+ +++|.+++..
T Consensus       240 vid~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~~~  270 (348)
T 2d8a_A          240 FLEFSGAP------------------KALEQGLQAVTPA-GRVSLLGLYP  270 (348)
T ss_dssp             EEECSCCH------------------HHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             EEECCCCH------------------HHHHHHHHHHhcC-CEEEEEccCC
Confidence            99999741                  1234555666543 4888877643

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.30  E-value=0.00047  Score=61.37  Aligned_cols=108  Identities=16%  Similarity=0.208  Sum_probs=66.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhcc------CCCCceEEEEccCCCcCCCchhhhcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGK------QDEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~------~~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      +.++|.|+|+ |.+|..++..|+..|  .+|+++++++++.+.....      .....+.+. +|     . . +.++++
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~-----~-~-~a~~~a   75 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG-----E-Y-SDCHDA   75 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC-----C-G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC-----C-H-HHhCCC
Confidence            4468999998 999999999999888  4899999887654431100      001233332 21     1 3 568899


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEE
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLV  200 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~  200 (333)
                      |+||..+|...-+.   ..-.+....|..-...+++.++. .. ..++++
T Consensus        76 DvVvi~ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           76 DLVVICAGAAQKPG---ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             SEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CEEEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99999998743111   11112345566767777775532 22 345543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.30  E-value=0.0011  Score=58.46  Aligned_cols=97  Identities=21%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCC-----CceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|+|+ |.+|..++..|+..|+  +|+++++++++.+........     ....+.. +     + . +.++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~-----~-~-~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G-----G-H-SELADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E-----C-G-GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C-----C-H-HHhCCCCEE
Confidence            47999998 9999999999999998  999999998655432111101     1222221 1     1 2 457889999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      |.+++...-+.   ....+....|+.....+++.+.
T Consensus        72 Ii~~~~~~~~g---~~r~dl~~~n~~i~~~i~~~i~  104 (304)
T 2v6b_A           72 ILTAGANQKPG---ESRLDLLEKNADIFRELVPQIT  104 (304)
T ss_dssp             EECC---------------CHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCCCCC---CcHHHHHHhHHHHHHHHHHHHH
Confidence            99997643211   1123456678887787777653

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.29  E-value=0.0003  Score=62.60  Aligned_cols=110  Identities=16%  Similarity=0.106  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccC----C-CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQ----D-EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~----~-~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+......    . .....+...     .+++ . ++++|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-----~d~~-~-~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-----KDYS-V-SAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-----SSSC-S-CSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-----CCHH-H-hCCCC
Confidence            3468999998 9999999999999986  8999999876654321100    0 111122211     1233 2 67899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +||-+||...-+   -..-.+.+..|..-...+++.+.+ +- ..++.+|
T Consensus        92 iVIitaG~p~kp---G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           92 LVVITAGARQQE---GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEEECCSCCCCS---SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEeCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            999999975322   122245677888888888876643 32 3455544

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.29  E-value=0.00042  Score=62.43  Aligned_cols=70  Identities=20%  Similarity=0.294  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+.+|||+|+ |.+|...++.+...|++|+++++++++.+...+.    ++..+.   .+++.+. +   ++|+||+++
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~v~---~~~~~~~-~---~~D~vid~~  242 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM----GVKHFY---TDPKQCK-E---ELDFIISTI  242 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT----TCSEEE---SSGGGCC-S---CEEEEEECC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----CCCeec---CCHHHHh-c---CCCEEEECC
Confidence            35679999997 9999999999988999999999998877655432    222222   4555555 3   899999999


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      |.
T Consensus       243 g~  244 (348)
T 3two_A          243 PT  244 (348)
T ss_dssp             CS
T ss_pred             Cc
Confidence            85

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.29  E-value=0.00015  Score=67.75  Aligned_cols=44  Identities=18%  Similarity=0.317  Sum_probs=38.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ..+++|||+||+|.||...++.+...|++|+++++++++.+.+.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~  262 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR  262 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            35689999999999999999999999999999999887776554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.28  E-value=0.00074  Score=60.07  Aligned_cols=109  Identities=12%  Similarity=0.113  Sum_probs=68.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +++|.|+|+ |.+|..++..|+..|. +|+++++++++.+.......      .....+...+     + . +.++++|+
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~-----d-~-~a~~~aDv   76 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN-----D-Y-KDLENSDV   76 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES-----C-G-GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC-----C-H-HHHCCCCE
Confidence            468999995 9999999999999887 99999999876542211100      1122222111     1 2 46788999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ||.++|...-+.   ..-.+.+..|......+++.+.. .- ..++.+|
T Consensus        77 VIi~ag~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           77 VIVTAGVPRKPG---MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             EEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCcCCCCC---CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999998643111   11122455687778888876643 32 3555544

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.28  E-value=0.00071  Score=60.19  Aligned_cols=106  Identities=9%  Similarity=0.119  Sum_probs=66.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|+|| |++|..++..|+..+.  +++++++++++.+.......     ...+.+. .|      -. +.++++|+|
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~------~~-~a~~~aDvV   76 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG------EY-SDCKDADLV   76 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC------CG-GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC------CH-HHhCCCCEE
Confidence            68999998 9999999999998875  89999998766653211110     1223332 21      13 568899999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEE
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLV  200 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~  200 (333)
                      |..++...-+.   ..-.+....|......+++.++. .. ..++.+
T Consensus        77 ii~ag~~~~~g---~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  120 (318)
T 1ez4_A           77 VITAGAPQKPG---ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (318)
T ss_dssp             EECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99998753221   11234667788888888886643 22 355554

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.27  E-value=0.00056  Score=63.81  Aligned_cols=42  Identities=29%  Similarity=0.282  Sum_probs=36.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~  121 (333)
                      .+.+++|+|||+ |.||+.+++.|...|++|++++|++.+...
T Consensus       262 ~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~  303 (488)
T 3ond_A          262 MIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ  303 (488)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            467899999997 599999999999999999999998766543

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.27  E-value=0.0002  Score=62.22  Aligned_cols=74  Identities=19%  Similarity=0.188  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CCeEEE-EEcCcchh--hhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~--~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +++|+|+|++|.+|+.+++.+++. |+++++ +++++++.  ....+.   .++  ...++...++++ +++.++|+||+
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~---~g~--~~~~v~~~~dl~-~~l~~~DvVID   78 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL---AGA--GKTGVTVQSSLD-AVKDDFDVFID   78 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS---SSS--SCCSCCEESCST-TTTTSCSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH---cCC--CcCCceecCCHH-HHhcCCCEEEE
Confidence            468999999999999999998854 788875 45554331  111100   000  011222234455 55668999998


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      ++.+
T Consensus        79 ft~p   82 (273)
T 1dih_A           79 FTRP   82 (273)
T ss_dssp             CSCH
T ss_pred             cCCh
Confidence            8854

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.27  E-value=0.00094  Score=60.76  Aligned_cols=98  Identities=18%  Similarity=0.164  Sum_probs=65.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhhh-----cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIF-----EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~~-----~~~d  153 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.    ++.. ..|..+ .+++. +.+     .++|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~~-vi~~~~~~~~~~-~~~~~~~~~g~D  264 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GATD-FVNPNDHSEPIS-QVLSKMTNGGVD  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCCE-EECGGGCSSCHH-HHHHHHHTSCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh----CCce-EEeccccchhHH-HHHHHHhCCCCC
Confidence            4679999995 9999999999988998 799999988877655422    2221 134443 12333 222     3799


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      +||+++|..                  ......+++++.+.+++|.++..
T Consensus       265 ~vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  296 (374)
T 1cdo_A          265 FSLECVGNV------------------GVMRNALESCLKGWGVSVLVGWT  296 (374)
T ss_dssp             EEEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEEECCCCH------------------HHHHHHHHHhhcCCcEEEEEcCC
Confidence            999999741                  12345556666542688887654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.26  E-value=0.00059  Score=63.95  Aligned_cols=76  Identities=22%  Similarity=0.354  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ..++|+|.|| |.+|.++++.| .++++|.++.++.++.+.+.+.  .++..++.||-+|++-++++-++.+|++|-+.+
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~--l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~  309 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEE--LENTIVFCGDAADQELLTEENIDQVDVFIALTN  309 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHH--CTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHH--CCCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence            3468999995 99999999997 4569999999999998887655  457889999999999888666889999998875

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.24  E-value=0.0005  Score=60.98  Aligned_cols=69  Identities=19%  Similarity=0.160  Sum_probs=52.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ...+++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++..       ..++. ++++++|+||-+
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~----g~~~-------~~~~~-~~~~~aDvvi~~   84 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH----GASV-------CESPA-EVIKKCKYTIAM   84 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----TCEE-------CSSHH-HHHHHCSEEEEC
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----CCeE-------cCCHH-HHHHhCCEEEEE
Confidence            34557899998 69999999999999999999999999887776531    2221       23344 566678888887


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus        85 vp   86 (310)
T 3doj_A           85 LS   86 (310)
T ss_dssp             CS
T ss_pred             cC
Confidence            64

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.23  E-value=0.00054  Score=60.22  Aligned_cols=71  Identities=15%  Similarity=0.115  Sum_probs=54.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+++|+|.| .|.||+.+++.|...|.+|++++|++++.+...+    .++.++.     .++++ +.+.++|+|+++
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~~~~-----~~~l~-~~l~~aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE----MGMEPFH-----ISKAA-QELRDVDVCINT  220 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTSEEEE-----GGGHH-HHTTTCSEEEEC
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----CCCeecC-----hhhHH-HHhcCCCEEEEC
Confidence            56789999999 5999999999999999999999999876544331    1233321     23455 677899999998


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus       221 ~p  222 (293)
T 3d4o_A          221 IP  222 (293)
T ss_dssp             CS
T ss_pred             CC
Confidence            74

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.22  E-value=0.00055  Score=61.09  Aligned_cols=110  Identities=10%  Similarity=0.105  Sum_probs=67.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~  151 (333)
                      +.+.++|.|+|| |.+|..++..|+..+.  +++++++++++.+.......     ...+.+. .|      -. +.+++
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~------~~-~a~~~   76 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA------EY-SDAKD   76 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC------CG-GGGGG
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC------CH-HHhCC
Confidence            344579999998 9999999999988875  89999998766544221110     1223332 21      13 56889


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEE
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLV  200 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~  200 (333)
                      +|+||..++...-+.   ..-.+....|......+++.+++ . -..++.+
T Consensus        77 aDvVii~ag~~~k~g---~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (326)
T 2zqz_A           77 ADLVVITAGAPQKPG---ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             CSEEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             CCEEEEcCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            999999998743111   11112345566777777776533 2 2355554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.22  E-value=0.00045  Score=61.28  Aligned_cols=110  Identities=15%  Similarity=0.073  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC--cchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~--~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~  151 (333)
                      ..++|.|+|+ |.+|..++..|+..|+ +|++++++  +++.+.......      .....+...+     + . +.+++
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~-----d-~-~a~~~   78 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS-----D-Y-ADTAD   78 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES-----C-G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC-----C-H-HHhCC
Confidence            4578999996 9999999999999999 99999998  443332210000      0111111111     1 2 46789


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      +|+||.++|...-+.   ..-.+.+..|......+.+++.. +. ..++.+|
T Consensus        79 aDvVIiaag~p~kpg---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           79 SDVVVITAGIARKPG---MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             CSEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999999998743221   11123566687777888876643 32 3556555

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.22  E-value=0.00021  Score=64.81  Aligned_cols=75  Identities=16%  Similarity=0.242  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|||+|+ |.+|..+++.+...|++|+++++++++.+...+.  +.. .+  .|..+..++.+....++|+||+++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l--Ga~-~v--~~~~~~~~~~~~~~~~~D~vid~~g  252 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM--GAD-HY--IATLEEGDWGEKYFDTFDLIVVCAS  252 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--TCS-EE--EEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc--CCC-EE--EcCcCchHHHHHhhcCCCEEEECCC
Confidence            4679999999 9999999999888899999999988776654421  221 11  2444431232133358999999998


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       253 ~  253 (360)
T 1piw_A          253 S  253 (360)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.18  E-value=0.00074  Score=61.07  Aligned_cols=98  Identities=22%  Similarity=0.288  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +.+|.|.||+|.+|+.+++.|.++. .+++.+.+..+....+.+... ..+..  ..|+.-.+  + +.++++|+||.++
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~-~~~~~vDvVf~at   90 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--D-ADFSTVDAVFCCL   90 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--G-CCGGGCSEEEECC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--h-hHhcCCCEEEEcC
Confidence            3589999999999999999999875 588887654322222111000 00100  12332222  3 4556899999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      +...                   +...+..++.|+ ++|-.|+..
T Consensus        91 p~~~-------------------s~~~a~~~~aG~-~VId~sa~~  115 (359)
T 1xyg_A           91 PHGT-------------------TQEIIKELPTAL-KIVDLSADF  115 (359)
T ss_dssp             CTTT-------------------HHHHHHTSCTTC-EEEECSSTT
T ss_pred             Cchh-------------------HHHHHHHHhCCC-EEEECCccc
Confidence            7531                   244555444465 577777643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.18  E-value=0.0033  Score=56.81  Aligned_cols=67  Identities=12%  Similarity=0.103  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCC---cEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV---THVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~---d~vi~  157 (333)
                      .+++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++.       ...+++ +++..+   |+||.
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~-------~~~s~~-e~~~~a~~~DvVi~   87 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE----GIA-------GARSIE-EFCAKLVKPRVVWL   87 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCB-------CCSSHH-HHHHHSCSSCEEEE
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC----CCE-------EeCCHH-HHHhcCCCCCEEEE
Confidence            357899998 69999999999999999999999999888776532    221       123444 555556   99999


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +..
T Consensus        88 ~vp   90 (358)
T 4e21_A           88 MVP   90 (358)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            874

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.18  E-value=0.0019  Score=57.20  Aligned_cols=70  Identities=6%  Similarity=-0.033  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcC--cchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~--~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ...+++|.|.| .|.+|..++..|++.|+ +|++++|+  +++.+.+..    .++..       ..+.. ++++++|+|
T Consensus        21 ~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~----~g~~~-------~~~~~-e~~~~aDvV   87 (312)
T 3qsg_A           21 QSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE----LGVSC-------KASVA-EVAGECDVI   87 (312)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH----TTCEE-------CSCHH-HHHHHCSEE
T ss_pred             cCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH----CCCEE-------eCCHH-HHHhcCCEE
Confidence            33457899999 59999999999999999 99999997  355544432    22322       13445 567789999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      |.+...
T Consensus        88 i~~vp~   93 (312)
T 3qsg_A           88 FSLVTA   93 (312)
T ss_dssp             EECSCT
T ss_pred             EEecCc
Confidence            998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.17  E-value=0.00035  Score=63.61  Aligned_cols=74  Identities=15%  Similarity=0.173  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.+...+.  +  +.. ..|..+++.++ +...++|+||+++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l--G--a~~-vi~~~~~~~~~-~~~~g~Dvvid~~g  266 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL--G--ADE-VVNSRNADEMA-AHLKSFDFILNTVA  266 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--T--CSE-EEETTCHHHHH-TTTTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--C--CcE-EeccccHHHHH-HhhcCCCEEEECCC
Confidence            4679999997 8899999999888999999999988776654421  2  211 13544443333 33468999999998


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       267 ~  267 (369)
T 1uuf_A          267 A  267 (369)
T ss_dssp             S
T ss_pred             C
Confidence            5

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.17  E-value=0.0012  Score=58.49  Aligned_cols=108  Identities=16%  Similarity=0.087  Sum_probs=67.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |+|.|+|+ |.+|+.++..|+..|.  +|+++++++++.+.......      .....+...|      .. +.++++|+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~------~~-~a~~~aDv   72 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN------DY-GPTEDSDV   72 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES------SS-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC------CH-HHhCCCCE
Confidence            47999996 9999999999999886  89999998876542211000      1122322121      13 56789999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ||.++|...-+.   ..-.+.+..|..-...+.+++.. +- ..++.+|
T Consensus        73 Vii~ag~~~kpG---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           73 CIITAGLPRSPG---MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EEECCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            999998743211   11234567788888888887643 32 3555544

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.16  E-value=0.00075  Score=59.59  Aligned_cols=68  Identities=13%  Similarity=0.082  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +.++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++...      ..++. ++++++|+||-+..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~~------~~~~~-e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE----GACGA------AASAR-EFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCSEE------ESSST-TTTTTCSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----CCccc------cCCHH-HHHhcCCEEEEECC
Confidence            346899998 69999999999999999999999999887776532    22111      12344 55667899988875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.16  E-value=0.0014  Score=59.55  Aligned_cols=99  Identities=15%  Similarity=0.107  Sum_probs=64.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhhh----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIF----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~~----~~~d~  154 (333)
                      .+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+...+.    ++.. ..|..+ .+++.+.+.    .++|+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~~-vi~~~~~~~~~~~~~~~~~~~g~D~  264 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GATE-CVNPQDYKKPIQEVLTEMSNGGVDF  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCce-EecccccchhHHHHHHHHhCCCCcE
Confidence            4679999995 9999999999988998 799999988877655422    2221 134443 123331111    27999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ||+++|..                  ......+++++.+.+++|.++..
T Consensus       265 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          265 SFEVIGRL------------------DTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             EEECSCCH------------------HHHHHHHHHBCTTTCEEEECSCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCcEEEEeccC
Confidence            99999741                  12344556666542688877643

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.14  E-value=0.0014  Score=59.64  Aligned_cols=98  Identities=17%  Similarity=0.124  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhhh----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~----~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.    ++.. ..|..+. +++.+.+.    .++|+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~-vi~~~~~~~~~~~~v~~~~~~g~Dv  268 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GATD-CLNPRELDKPVQDVITELTAGGVDY  268 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSE-EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCcE-EEccccccchHHHHHHHHhCCCccE
Confidence            4679999995 9999999999888998 799999988876655422    2221 1244431 23331111    37999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      ||+++|..                  ......++.++.+.+++|.++.
T Consensus       269 vid~~G~~------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          269 SLDCAGTA------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             EEESSCCH------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            99999741                  1234455666654268888765

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.11  E-value=0.00046  Score=64.29  Aligned_cols=77  Identities=18%  Similarity=0.208  Sum_probs=52.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceE-EE-----EccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQ-VC-----KGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~-~v-----~~D~~d~~~~~~~~~~~~d  153 (333)
                      |+|.|.| +|++|..++..|++.|++|++++|++++.+.+.....   .+++. .+     .+.+.-..++. +.+.++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~-~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK-KAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH-HHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHH-HHhccCC
Confidence            3799998 6999999999999999999999999988777653210   00000 00     01111122344 4677899


Q ss_pred             EEEEcCCC
Q 019935          154 HVICCTGT  161 (333)
Q Consensus       154 ~vi~~a~~  161 (333)
                      +||.+.+.
T Consensus        79 vviiaVpt   86 (436)
T 1mv8_A           79 VSFICVGT   86 (436)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99999864

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.11  E-value=0.0014  Score=58.02  Aligned_cols=109  Identities=21%  Similarity=0.221  Sum_probs=67.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-C--CeEEEEEcCcchhh----hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-N--IKSRLLLRDPEKAT----TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g--~~V~~~~R~~~~~~----~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|+||+|.+|..++..|... +  .+++++++++ +.+    .+.. . .....+... ..  .... +.++++|+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~-~-~~~~~v~~~-~~--~~~~-~~~~~aDiv   73 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH-I-PTAVKIKGF-SG--EDAT-PALEGADVV   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHT-S-CSSEEEEEE-CS--SCCH-HHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhC-C-CCCceEEEe-cC--CCcH-HHhCCCCEE
Confidence            47999999999999999999875 5  5899999876 221    1221 1 112222111 01  1234 678899999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      |..||...-+   -..-.+.++.|......+.+++.. .. ..++.+|
T Consensus        74 ii~ag~~rkp---G~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           74 LISAGVARKP---GMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             EECCSCSCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9999864311   112234567788888888886643 22 3555554

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.11  E-value=0.00036  Score=62.88  Aligned_cols=74  Identities=19%  Similarity=0.212  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchh---h-hcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA---I-FEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~---~-~~~~d~vi  156 (333)
                      .+.+|||+||+|.+|...++.+...|++|+++++++++.+.+.+.  +  +..+ .|..+  ++.+.   . -+++|+||
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l--G--a~~v-i~~~~--~~~~~~~~~~~~g~Dvv~  222 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM--G--ADIV-LNHKE--SLLNQFKTQGIELVDYVF  222 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH--T--CSEE-ECTTS--CHHHHHHHHTCCCEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--C--CcEE-EECCc--cHHHHHHHhCCCCccEEE
Confidence            578999999999999999999999999999999988776655432  2  2111 23332  23211   1 12699999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      +++|.
T Consensus       223 d~~g~  227 (346)
T 3fbg_A          223 CTFNT  227 (346)
T ss_dssp             ESSCH
T ss_pred             ECCCc
Confidence            99874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.11  E-value=0.00092  Score=60.29  Aligned_cols=97  Identities=14%  Similarity=0.129  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCch--hhh-----cCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDP--AIF-----EGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~--~~~-----~~~  152 (333)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.+...+.  +.. .  ..|..+ .+..++  +..     .++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l--Ga~-~--~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC--GAD-V--TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TCS-E--EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh--CCC-E--EEcCcccccHHHHHHHHhccccCCCC
Confidence            4679999996 9999999999888999999999988776655422  222 2  235543 332220  222     369


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      |+||+++|..                  ......+++++.+ +++|.++.
T Consensus       242 D~vid~~g~~------------------~~~~~~~~~l~~~-G~iv~~G~  272 (352)
T 1e3j_A          242 NVTIDCSGNE------------------KCITIGINITRTG-GTLMLVGM  272 (352)
T ss_dssp             SEEEECSCCH------------------HHHHHHHHHSCTT-CEEEECSC
T ss_pred             CEEEECCCCH------------------HHHHHHHHHHhcC-CEEEEEec
Confidence            9999999742                  1234455666553 58887764

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=97.10  E-value=0.002  Score=57.37  Aligned_cols=101  Identities=10%  Similarity=0.083  Sum_probs=68.9

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ...+.+++|.|.| .|.||+.+++.|...|++|++++|++...+.+.      .  ...     ..+++ ++++.+|+|+
T Consensus       132 ~~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~------~--~~~-----~~~l~-ell~~aDvV~  196 (324)
T 3evt_A          132 TSTLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHFH------E--TVA-----FTATA-DALATANFIV  196 (324)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS------E--EEE-----GGGCH-HHHHHCSEEE
T ss_pred             CccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh------h--ccc-----cCCHH-HHHhhCCEEE
Confidence            4567889999999 699999999999999999999999875443211      1  111     24567 7888999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      .+.....       .-..++  |    ...+..++.+ .-||++|.....
T Consensus       197 l~lPlt~-------~t~~li--~----~~~l~~mk~g-ailIN~aRG~~v  232 (324)
T 3evt_A          197 NALPLTP-------TTHHLF--S----TELFQQTKQQ-PMLINIGRGPAV  232 (324)
T ss_dssp             ECCCCCG-------GGTTCB--S----HHHHHTCCSC-CEEEECSCGGGB
T ss_pred             EcCCCch-------HHHHhc--C----HHHHhcCCCC-CEEEEcCCChhh
Confidence            9875431       001111  1    2345566654 478888876664

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.10  E-value=0.00048  Score=60.39  Aligned_cols=106  Identities=12%  Similarity=0.119  Sum_probs=67.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |||.|+|+ |+||+.++..|+.++  .++++++.++++.+.......      .....+...+     +.  +.++++|+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~-----d~--~~~~~aDv   72 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA-----DY--SLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES-----CG--GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC-----CH--HHhCCCCE
Confidence            57999995 999999999998887  479999988755432211000      1122222221     12  34678999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      ||-.||...-|.   ..-.+.+..|..-...+.+++.+ .-+-++.
T Consensus        73 VvitAG~prkpG---mtR~dLl~~Na~I~~~i~~~i~~~~p~aivl  115 (294)
T 2x0j_A           73 IVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENAPESKIL  115 (294)
T ss_dssp             EEECCCCCCCSS---SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEE
T ss_pred             EEEecCCCCCCC---CchHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence            999999754221   22244677898888888887643 4344443

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.10  E-value=0.0012  Score=60.04  Aligned_cols=99  Identities=17%  Similarity=0.159  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhhh----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIF----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~~----~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.  +  +.. ..|..+ .+++.+.+.    .++|+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l--G--a~~-vi~~~~~~~~~~~~v~~~~~~g~D~  263 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF--G--ATE-CINPQDFSKPIQEVLIEMTDGGVDY  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH--T--CSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc--C--Cce-EeccccccccHHHHHHHHhCCCCCE
Confidence            4679999996 9999999998888898 799999988776654422  2  211 124433 123331111    27999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ||+++|..                  ......+++++.+.+++|.++..
T Consensus       264 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  294 (373)
T 2fzw_A          264 SFECIGNV------------------KVMRAALEACHKGWGVSVVVGVA  294 (373)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEECCCcH------------------HHHHHHHHhhccCCcEEEEEecC
Confidence            99999741                  12345556666542688887643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.09  E-value=0.0012  Score=58.69  Aligned_cols=95  Identities=16%  Similarity=0.113  Sum_probs=63.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-cCCcEEEEcCCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGTT  162 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-~~~d~vi~~a~~~  162 (333)
                      +|||+||+|.+|...++.+...|++|+++++++++.+.+.+.  +....+   |..+.+.++ ++. .++|++|+++|. 
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l--Ga~~vi---~~~~~~~~~-~~~~~~~d~v~d~~g~-  221 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL--GANRIL---SRDEFAESR-PLEKQLWAGAIDTVGD-  221 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH--TCSEEE---EGGGSSCCC-SSCCCCEEEEEESSCH-
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--CCCEEE---ecCCHHHHH-hhcCCCccEEEECCCc-
Confidence            399999999999999999999999999999998877665432  222222   333333333 222 478999999863 


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                                        ......+++++. .++++.++...
T Consensus       222 ------------------~~~~~~~~~l~~-~G~iv~~G~~~  244 (324)
T 3nx4_A          222 ------------------KVLAKVLAQMNY-GGCVAACGLAG  244 (324)
T ss_dssp             ------------------HHHHHHHHTEEE-EEEEEECCCTT
T ss_pred             ------------------HHHHHHHHHHhc-CCEEEEEecCC
Confidence                              123444555554 35888876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.09  E-value=0.00068  Score=61.33  Aligned_cols=75  Identities=12%  Similarity=0.079  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|||+|+ |.+|...++.+...|++|+++++++++.+...+.. +.. .+  .|..+.+.+. +...++|+||+++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-Ga~-~v--i~~~~~~~~~-~~~~g~D~vid~~g  253 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-GAD-DY--VIGSDQAKMS-ELADSLDYVIDTVP  253 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-CCS-CE--EETTCHHHHH-HSTTTEEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-CCc-ee--eccccHHHHH-HhcCCCCEEEECCC
Confidence            5679999995 99999999988888999999999887766544222 221 11  2444444444 44458999999998


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       254 ~  254 (357)
T 2cf5_A          254 V  254 (357)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.09  E-value=0.00079  Score=60.04  Aligned_cols=94  Identities=17%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc--CCCchhhh-cCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIF-EGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~--~~~~~~~~-~~~d~vi~~a~  160 (333)
                      +|||+||+|.+|...++.+...|++|+++++++++.+...+.  +.. .+  .|..+.  +.+. +.- .++|+||+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l--Ga~-~~--i~~~~~~~~~~~-~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL--GAK-EV--LAREDVMAERIR-PLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT--TCS-EE--EECC----------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--CCc-EE--EecCCcHHHHHH-HhcCCcccEEEECCc
Confidence            799999999999999999999999999999987776655432  221 11  244433  1222 221 36899999997


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ..            .       ....++.++. .++++.++..
T Consensus       226 ~~------------~-------~~~~~~~l~~-~G~~v~~G~~  248 (328)
T 1xa0_A          226 GR------------T-------LATVLSRMRY-GGAVAVSGLT  248 (328)
T ss_dssp             TT------------T-------HHHHHHTEEE-EEEEEECSCC
T ss_pred             HH------------H-------HHHHHHhhcc-CCEEEEEeec
Confidence            41            0       2344555554 2588877654

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.08  E-value=0.004  Score=48.07  Aligned_cols=105  Identities=13%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           80 SSSKLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ...++|.|.|++   |.+|..+++.|++.|++|+.++++.++.         .++.       -..++. ++.+.+|+++
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---------~G~~-------~~~s~~-el~~~vDlvi   74 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---------EGLK-------CYRSVR-ELPKDVDVIV   74 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---------TTEE-------CBSSGG-GSCTTCCEEE
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---------CCee-------ecCCHH-HhCCCCCEEE
Confidence            345789999997   8999999999999999977776553211         1111       123344 4445789998


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHH-hcCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~  235 (333)
                      -+...                   .....+++ +++.|++.++..++..                    ...+.+..++.
T Consensus        75 i~vp~-------------------~~v~~v~~~~~~~g~~~i~~~~~~~--------------------~~~l~~~a~~~  115 (138)
T 1y81_A           75 FVVPP-------------------KVGLQVAKEAVEAGFKKLWFQPGAE--------------------SEEIRRFLEKA  115 (138)
T ss_dssp             ECSCH-------------------HHHHHHHHHHHHTTCCEEEECTTSC--------------------CHHHHHHHHHH
T ss_pred             EEeCH-------------------HHHHHHHHHHHHcCCCEEEEcCccH--------------------HHHHHHHHHHC
Confidence            87642                   22344444 3345787776654321                    13355566778


Q ss_pred             CCCEE
Q 019935          236 GLPFT  240 (333)
Q Consensus       236 gi~~~  240 (333)
                      |+++.
T Consensus       116 Gi~~i  120 (138)
T 1y81_A          116 GVEYS  120 (138)
T ss_dssp             TCEEE
T ss_pred             CCEEE
Confidence            88754

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.07  E-value=0.0016  Score=59.20  Aligned_cols=99  Identities=16%  Similarity=0.129  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhh---h-cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI---F-EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~---~-~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.    ++.. ..|..+. +++.+.+   . .++|+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~-vi~~~~~~~~~~~~i~~~t~gg~Dv  264 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GATE-CLNPKDYDKPIYEVICEKTNGGVDY  264 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCcE-EEecccccchHHHHHHHHhCCCCCE
Confidence            4679999995 9999999998888898 799999988776655422    2221 1244331 2333111   1 37999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ||+++|..                  ......+++++.+.+++|.++..
T Consensus       265 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (373)
T 1p0f_A          265 AVECAGRI------------------ETMMNALQSTYCGSGVTVVLGLA  295 (373)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECCCC
T ss_pred             EEECCCCH------------------HHHHHHHHHHhcCCCEEEEEccC
Confidence            99999741                  12344556666542688877643

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.07  E-value=0.002  Score=58.62  Aligned_cols=99  Identities=18%  Similarity=0.150  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCC-cCCCchhh---h-cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAI---F-EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-~~~~~~~~---~-~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+    -++.. ..|..+ .+++.+.+   . .++|+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~-vi~~~~~~~~~~~~i~~~~~gg~D~  266 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVNE-FVNPKDHDKPIQEVIVDLTDGGVDY  266 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCCE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCcE-EEccccCchhHHHHHHHhcCCCCCE
Confidence            4678999998 9999999999988898 89999999888765542    22222 134432 22333111   1 27999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      ||+++|..                  ......+++++.+.++++.++..
T Consensus       267 vid~~g~~------------------~~~~~~~~~l~~g~G~iv~~G~~  297 (378)
T 3uko_A          267 SFECIGNV------------------SVMRAALECCHKGWGTSVIVGVA  297 (378)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhccCCEEEEEccc
Confidence            99999742                  12345556666544788887753

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.07  E-value=0.00048  Score=60.87  Aligned_cols=83  Identities=14%  Similarity=-0.065  Sum_probs=56.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+++++|.|++.-+|+.+++.|+..|.+|++++|+..+..+.................++++++. +.+.++|+||.+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~-e~l~~ADIVIsA  252 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLK-KCSLDSDVVITG  252 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHH-HHHHHCSEEEEC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHH-HHhccCCEEEEC
Confidence            5678999999988788999999999999999999998544333222111110111111112234566 778899999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .+..
T Consensus       253 tg~p  256 (320)
T 1edz_A          253 VPSE  256 (320)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            9864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.07  E-value=0.00074  Score=60.68  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~v  155 (333)
                      .+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+...+.     ... ..|..++ ++.+.+.    .++|+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-----a~~-v~~~~~~-~~~~~~~~~~~~g~D~v  235 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-----ADR-LVNPLEE-DLLEVVRRVTGSGVEVL  235 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-----CSE-EECTTTS-CHHHHHHHHHSSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-----HHh-ccCcCcc-CHHHHHHHhcCCCCCEE
Confidence            5679999999 9999999999988998 999999998776654321     111 2355443 3331211    379999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      |+++|..                  ......++.++.+ +++|.++.
T Consensus       236 id~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~  263 (343)
T 2dq4_A          236 LEFSGNE------------------AAIHQGLMALIPG-GEARILGI  263 (343)
T ss_dssp             EECSCCH------------------HHHHHHHHHEEEE-EEEEECCC
T ss_pred             EECCCCH------------------HHHHHHHHHHhcC-CEEEEEec
Confidence            9999741                  1234556666543 48888765

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.07  E-value=0.00048  Score=64.34  Aligned_cols=77  Identities=19%  Similarity=0.216  Sum_probs=52.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---CCceE-EE-----EccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQ-VC-----KGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---~~~~~-~v-----~~D~~d~~~~~~~~~~~~d  153 (333)
                      ++|.|.| .|++|..++..|++.|++|++++|++++.+.+.....   .+++. .+     .+.+.-..++. ++++++|
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~-ea~~~aD   80 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIE-QAVPEAD   80 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHH-HHGGGCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHH-HHHhcCC
Confidence            6899998 5999999999999999999999999988777653110   00100 00     00111112344 5677899


Q ss_pred             EEEEcCCC
Q 019935          154 HVICCTGT  161 (333)
Q Consensus       154 ~vi~~a~~  161 (333)
                      +||.+.+.
T Consensus        81 vViiaVpt   88 (450)
T 3gg2_A           81 IIFIAVGT   88 (450)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99999865

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.05  E-value=0.00021  Score=64.14  Aligned_cols=102  Identities=19%  Similarity=0.181  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcch--hhhh---hccCCCCc-eEEEEccCCCcCCCchh
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTL---FGKQDEET-LQVCKGDTRNPKDLDPA  147 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~--~~~~---~~~~~~~~-~~~v~~D~~d~~~~~~~  147 (333)
                      ..-||.|+||+|+||+.++..|+....       ++.+++.++..  .+..   ......+. .....++     +.. +
T Consensus        23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~-~   96 (345)
T 4h7p_A           23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPR-V   96 (345)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHH-H
T ss_pred             CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChH-H
Confidence            345899999999999999998887532       68888876532  1211   11111111 1222221     234 6


Q ss_pred             hhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      .++++|+||-.||...-|   -..-.+.++.|..-...+.+++.
T Consensus        97 a~~~advVvi~aG~prkp---GmtR~DLl~~Na~I~~~~~~~i~  137 (345)
T 4h7p_A           97 AFDGVAIAIMCGAFPRKA---GMERKDLLEMNARIFKEQGEAIA  137 (345)
T ss_dssp             HTTTCSEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC---CCCHHHHHHHhHHHHHHHHHHHH
Confidence            788999999999975422   22224467888888888888763

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.05  E-value=0.00075  Score=60.25  Aligned_cols=72  Identities=25%  Similarity=0.265  Sum_probs=49.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc--CCCchhhh-cCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIF-EGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~--~~~~~~~~-~~~d~vi~~a~  160 (333)
                      +|||+||+|.+|...++.+...|++|+++++++++.+...+.  +.. .++  |..+.  +.+. +.. .++|+||+++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l--Ga~-~v~--~~~~~~~~~~~-~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL--GAS-EVI--SREDVYDGTLK-ALSKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH--TCS-EEE--EHHHHCSSCCC-SSCCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCc-EEE--ECCCchHHHHH-HhhcCCccEEEECCc
Confidence            799999999999999999988999999999987776554321  222 122  22222  2222 221 36899999997


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       227 ~  227 (330)
T 1tt7_A          227 G  227 (330)
T ss_dssp             T
T ss_pred             H
Confidence            3

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.04  E-value=0.00039  Score=62.99  Aligned_cols=75  Identities=19%  Similarity=0.081  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccC------------------CCcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT------------------RNPK  142 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~------------------~d~~  142 (333)
                      .+.+|+|+|+ |-+|..+++.|...|++|++++|++++.+.+.+    -+.+++..|+                  .+.+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCEECCCC-------------CHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence            5679999997 999999999999999999999999887766543    2344443321                  0112


Q ss_pred             CCchhhhcCCcEEEEcCCC
Q 019935          143 DLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus       143 ~~~~~~~~~~d~vi~~a~~  161 (333)
                      .+. +.+.++|+||.++..
T Consensus       258 ~l~-e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          258 ALE-DAITKFDIVITTALV  275 (381)
T ss_dssp             HHH-HHHTTCSEEEECCCC
T ss_pred             HHH-HHHhcCCEEEECCCC
Confidence            344 567899999998743

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.03  E-value=0.00037  Score=62.03  Aligned_cols=75  Identities=21%  Similarity=0.182  Sum_probs=52.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ..+.+|||+||+|.+|...++.+...|++|++++++. +.+...+ .   ++.. ..|..+.+.+. +.+.++|+||++.
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~-l---Ga~~-~i~~~~~~~~~-~~~~g~D~v~d~~  223 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKA-L---GAEQ-CINYHEEDFLL-AISTPVDAVIDLV  223 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHH-H---TCSE-EEETTTSCHHH-HCCSCEEEEEESS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHH-c---CCCE-EEeCCCcchhh-hhccCCCEEEECC
Confidence            3567999999999999999999999999999887543 3332221 1   2221 23555544355 5567899999998


Q ss_pred             CC
Q 019935          160 GT  161 (333)
Q Consensus       160 ~~  161 (333)
                      |.
T Consensus       224 g~  225 (321)
T 3tqh_A          224 GG  225 (321)
T ss_dssp             CH
T ss_pred             Cc
Confidence            74

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.01  E-value=0.00062  Score=63.75  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=38.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ..+.+|||+||+|.+|...++.+...|++|+++++++++.+.+.
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~  270 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR  270 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            35679999999999999999999999999999999887766554

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.00  E-value=0.00044  Score=58.12  Aligned_cols=68  Identities=15%  Similarity=0.108  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++|.|.| +|.+|.+++..|++.|++|++ ++|++++.+.+....   ++...       .+.. +.+.++|+||.+.
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~---g~~~~-------~~~~-~~~~~aDvVilav   89 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF---GASVK-------AVEL-KDALQADVVILAV   89 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH---TTTEE-------ECCH-HHHTTSSEEEEES
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh---CCCcc-------cChH-HHHhcCCEEEEeC
Confidence            356899999 799999999999999999999 899988877654321   11111       1223 4467899999887


Q ss_pred             C
Q 019935          160 G  160 (333)
Q Consensus       160 ~  160 (333)
                      .
T Consensus        90 p   90 (220)
T 4huj_A           90 P   90 (220)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.99  E-value=0.00082  Score=58.80  Aligned_cols=65  Identities=17%  Similarity=0.165  Sum_probs=50.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++..       ..+++ +++.++|+||.+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~-------~~~~~-~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----GAER-------AATPC-EVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----TCEE-------CSSHH-HHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCee-------cCCHH-HHHhcCCEEEEEcC
Confidence            5899999 59999999999999999999999999887776532    2221       23455 56677899988774

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.99  E-value=0.0016  Score=58.77  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=64.1

Q ss_pred             CeEEEEcCCChHHHHH-HHHH-HhCCCe-EEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCch--hhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLV-VASL-LSRNIK-SRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l-~~~L-~~~g~~-V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~~~~d~  154 (333)
                      .+|||+|+ |.+|... ++.+ ...|++ |++++++++   +.+...    .-++..+  |..+. ++.+  +.-.++|+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~~v--~~~~~-~~~~i~~~~gg~Dv  245 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDATYV--DSRQT-PVEDVPDVYEQMDF  245 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTCEEE--ETTTS-CGGGHHHHSCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCCccc--CCCcc-CHHHHHHhCCCCCE
Confidence            79999999 9999999 8877 677987 999999887   665544    2244555  66543 3331  12126999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      ||+++|..                  ......++.++.+ +++|.++...
T Consensus       246 vid~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~~~  276 (357)
T 2b5w_A          246 IYEATGFP------------------KHAIQSVQALAPN-GVGALLGVPS  276 (357)
T ss_dssp             EEECSCCH------------------HHHHHHHHHEEEE-EEEEECCCCC
T ss_pred             EEECCCCh------------------HHHHHHHHHHhcC-CEEEEEeCCC
Confidence            99999742                  1234455666543 5888876543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.98  E-value=0.0011  Score=57.15  Aligned_cols=69  Identities=22%  Similarity=0.296  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +..+ +|+|.|+ |.+|+.++..|.+.|++|++++|+.++.+.+.+..   +..        .+++. +. .++|+||++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~---~~~--------~~~~~-~~-~~~Divi~~  178 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF---GLR--------AVPLE-KA-REARLLVNA  178 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH---TCE--------ECCGG-GG-GGCSEEEEC
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc--------hhhHh-hc-cCCCEEEEc
Confidence            4567 8999995 88999999999999999999999987776654322   111        12455 55 789999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus       179 tp~~  182 (263)
T 2d5c_A          179 TRVG  182 (263)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            9764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.97  E-value=0.0004  Score=60.74  Aligned_cols=41  Identities=12%  Similarity=0.031  Sum_probs=35.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      .++|.|.|+ |.+|+.++..|++.|++|++++|+++..+...
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            468999985 99999999999999999999999987765543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.96  E-value=0.0027  Score=56.35  Aligned_cols=70  Identities=17%  Similarity=0.075  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceE-EEEccCCCcCCCchh-hhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQ-VCKGDTRNPKDLDPA-IFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~-~v~~D~~d~~~~~~~-~~~~~d~v  155 (333)
                      .+.++|.|.| .|.+|..++..|.+.|+  +|++++|++++.+...+.    ++. ..      ..+++ + ++.++|+|
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~~~~~------~~~~~-~~~~~~aDvV   98 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEG------TTSIA-KVEDFSPDFV   98 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEE------ESCTT-GGGGGCCSEE
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CCcchh------cCCHH-HHhhccCCEE
Confidence            3457999999 79999999999999999  999999998776655421    110 01      12344 5 67889999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      |.+...
T Consensus        99 ilavp~  104 (314)
T 3ggo_A           99 MLSSPV  104 (314)
T ss_dssp             EECSCG
T ss_pred             EEeCCH
Confidence            998743

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.96  E-value=0.0012  Score=59.42  Aligned_cols=96  Identities=11%  Similarity=0.041  Sum_probs=56.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++|.|.||+|++|+.+++.|.++. .+++.+.+..+....+.+.  ...+.- ..|+.- .+++ + +.++|+||.+++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~--~~~~~g-~~~~~~-~~~~-~-~~~vDvV~~a~g   77 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFV--HPNLRG-RTNLKF-VPPE-K-LEPADILVLALP   77 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGT--CGGGTT-TCCCBC-BCGG-G-CCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHh--CchhcC-cccccc-cchh-H-hcCCCEEEEcCC
Confidence            4689999999999999999999775 5888777643332222111  000000 012111 1122 2 468999999987


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHH-hcCCCCCeEEEEecc
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIVLVSSV  203 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~-a~~~~~~~~v~~SS~  203 (333)
                      ..                   ....++. +.+.|+ ++|-+|+.
T Consensus        78 ~~-------------------~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           78 HG-------------------VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             TT-------------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred             cH-------------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence            53                   1234443 335565 57777764

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.96  E-value=0.0036  Score=54.75  Aligned_cols=97  Identities=15%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|.|.| .|.||+.+++.|...|++|++++|++++.+.         +.       ..++++ ++++.+|+|+.
T Consensus       118 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---------~~-------~~~~l~-ell~~aDiV~l  179 (290)
T 3gvx_A          118 TLLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV---------DV-------ISESPA-DLFRQSDFVLI  179 (290)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC---------SE-------ECSSHH-HHHHHCSEEEE
T ss_pred             eeeecchheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc---------cc-------ccCChH-HHhhccCeEEE
Confidence            467889999999 6999999999999999999999998654321         11       123566 78889999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      +.....       ....++  |    ...++.++.+ .-||++|+....
T Consensus       180 ~~P~t~-------~t~~li--~----~~~l~~mk~g-ailIN~aRG~~v  214 (290)
T 3gvx_A          180 AIPLTD-------KTRGMV--N----SRLLANARKN-LTIVNVARADVV  214 (290)
T ss_dssp             CCCCCT-------TTTTCB--S----HHHHTTCCTT-CEEEECSCGGGB
T ss_pred             Eeeccc-------cchhhh--h----HHHHhhhhcC-ceEEEeehhccc
Confidence            886431       001111  1    2344555544 478888876654

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.95  E-value=0.0009  Score=58.79  Aligned_cols=65  Identities=20%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++..       ..+++ +.++++|+||.+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~-------~~~~~-~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA----GAET-------ASTAK-AIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCEE-------CSSHH-HHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC----CCee-------cCCHH-HHHhCCCEEEEECC
Confidence            5899999 69999999999999999999999998877766532    2221       12344 55677899998875

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.93  E-value=0.0011  Score=60.18  Aligned_cols=97  Identities=19%  Similarity=0.255  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchh---hhc--CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA---IFE--GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~---~~~--~~d~v  155 (333)
                      .+.+|||+| +|.+|...++.+...|++|+++++++++.+...+.    ++..+ .| .+.+++.+.   ...  ++|+|
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~v-i~-~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GADHG-IN-RLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCSEE-EE-TTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCCEE-Ec-CCcccHHHHHHHHhCCCCceEE
Confidence            467999999 89999999999999999999999998776654422    22211 24 333333312   222  79999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++|..                   .....+++++.+ ++++.++...
T Consensus       262 id~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  290 (363)
T 3uog_A          262 LEIAGGA-------------------GLGQSLKAVAPD-GRISVIGVLE  290 (363)
T ss_dssp             EEETTSS-------------------CHHHHHHHEEEE-EEEEEECCCS
T ss_pred             EECCChH-------------------HHHHHHHHhhcC-CEEEEEecCC
Confidence            9999831                   124455666543 5888887654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.92  E-value=0.00082  Score=57.40  Aligned_cols=39  Identities=23%  Similarity=0.322  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~  118 (333)
                      +..+++|.|.| .|.+|.+++..|++.|++|++++|++++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45678999998 7999999999999999999999999876

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.92  E-value=0.0006  Score=59.68  Aligned_cols=65  Identities=15%  Similarity=0.173  Sum_probs=50.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+.    ++.+       ..+.+ ++++++|+||.+..
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~-------~~~~~-~~~~~advvi~~v~   66 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL----GARQ-------ASSPA-EVCAACDITIAMLA   66 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH----TCEE-------CSCHH-HHHHHCSEEEECCS
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCee-------cCCHH-HHHHcCCEEEEEcC
Confidence            5799998 69999999999999999999999999887766532    2221       12444 56677888888774

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.91  E-value=0.00076  Score=59.67  Aligned_cols=67  Identities=21%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|.|.| .|.+|..+++.|++.|++|++++|++++.+.+.+.    ++..       ..++. ++++++|+||.+..
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~~-------~~~~~-e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA----GAHL-------CESVK-AALSASPATIFVLL   74 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----TCEE-------CSSHH-HHHHHSSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC----CCee-------cCCHH-HHHhcCCEEEEEeC
Confidence            456899998 69999999999999999999999999887766532    2221       23445 56677898888774

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.91  E-value=0.00087  Score=61.30  Aligned_cols=44  Identities=16%  Similarity=0.018  Sum_probs=37.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ...+++|+|+|+ |.+|..+++.+...|++|++++|++.+.+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            346789999995 99999999999999999999999887655443

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.90  E-value=0.0015  Score=58.95  Aligned_cols=74  Identities=12%  Similarity=0.076  Sum_probs=51.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEc------cC-CCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKG------DT-RNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~------D~-~d~~~~~~~~~~~~d~v  155 (333)
                      ++|.|.|+ |.+|..++..|++.|++|++++|++++.+.+.+..   ++.+...      .+ ....+++ +.+.++|+|
T Consensus         5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v   79 (359)
T 1bg6_A            5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIG-LAVKDADVI   79 (359)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHH-HHHTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHH-HHHhcCCEE
Confidence            68999995 99999999999999999999999988776654321   1211111      11 0122344 556789999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      |.+...
T Consensus        80 i~~v~~   85 (359)
T 1bg6_A           80 LIVVPA   85 (359)
T ss_dssp             EECSCG
T ss_pred             EEeCCc
Confidence            998854

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.89  E-value=0.00088  Score=60.61  Aligned_cols=74  Identities=22%  Similarity=0.192  Sum_probs=52.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc--CCCchhhh-c-CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIF-E-GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~--~~~~~~~~-~-~~d~v  155 (333)
                      .+.+|||+|+ |.+|...++.+... |++|+++++++++.+...+.    ++.. ..|..++  +.+. +.- . ++|+|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~-vi~~~~~~~~~v~-~~~~g~g~Dvv  258 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL----GADH-VVDARRDPVKQVM-ELTRGRGVNVA  258 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT----TCSE-EEETTSCHHHHHH-HHTTTCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh----CCCE-EEeccchHHHHHH-HHhCCCCCcEE
Confidence            4679999999 99999999998888 99999999988776655422    2221 1355443  1122 222 2 69999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      |+++|.
T Consensus       259 id~~G~  264 (359)
T 1h2b_A          259 MDFVGS  264 (359)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999974

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.89  E-value=0.0031  Score=57.23  Aligned_cols=101  Identities=16%  Similarity=0.117  Sum_probs=63.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh-cCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF-EGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~-~~~d~vi  156 (333)
                      ..+.+|||+||+|.+|...++.+...|++|+++. ++++.+...+.    ++.. ..|..+++..+.  +.. +++|+||
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga~~-vi~~~~~~~~~~v~~~t~g~~d~v~  236 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSR----GAEE-VFDYRAPNLAQTIRTYTKNNLRYAL  236 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TCSE-EEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHc----CCcE-EEECCCchHHHHHHHHccCCccEEE
Confidence            4567999999999999999999999999999886 56555543321    2221 135444332220  111 3599999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      +++|..                  ......++++....++++.++...
T Consensus       237 d~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~~~  266 (371)
T 3gqv_A          237 DCITNV------------------ESTTFCFAAIGRAGGHYVSLNPFP  266 (371)
T ss_dssp             ESSCSH------------------HHHHHHHHHSCTTCEEEEESSCCC
T ss_pred             ECCCch------------------HHHHHHHHHhhcCCCEEEEEecCc
Confidence            999852                  123445556632246888776433

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.88  E-value=0.00055  Score=60.68  Aligned_cols=107  Identities=15%  Similarity=0.095  Sum_probs=66.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +||.|+|+ |++|..++..|+..+  .+++++++++++.+.......     ...+.+.. |     . . +.++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~-----~-~-~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G-----S-Y-GDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C-----C-G-GGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C-----C-H-HHhCCCCEE
Confidence            48999998 999999999999887  689999998866653211110     11233322 1     2 3 568899999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      |..++...-+.   ..-.+....|......+++.+++ +. ..++.+|
T Consensus        72 ii~ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           72 VLAAGVAQRPG---ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             EECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EECCCCCCCCC---cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99998743211   01112345566777777776533 22 3555543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.87  E-value=0.002  Score=59.19  Aligned_cols=74  Identities=23%  Similarity=0.221  Sum_probs=53.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---hc--CCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FE--GVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~~--~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+    -++++  .|..+.+.+.+.+   ..  ++|+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--i~~~~~~~~~~~~~~~~~g~g~Dv  257 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGFET--IDLRNSAPLRDQIDQILGKPEVDC  257 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTCEE--EETTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCcE--EcCCCcchHHHHHHHHhCCCCCCE
Confidence            4679999996 9999999998888898 89999999887765542    23443  4655544312122   22  6999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||+++|.
T Consensus       258 vid~~g~  264 (398)
T 2dph_A          258 GVDAVGF  264 (398)
T ss_dssp             EEECSCT
T ss_pred             EEECCCC
Confidence            9999985

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.001  Score=60.67  Aligned_cols=75  Identities=11%  Similarity=0.025  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCC----------------C----
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR----------------N----  140 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~----------------d----  140 (333)
                      .+.+|+|+|+ |-+|...++.|...|++|+++++++.+.+...+    -+..++..++.                +    
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~  263 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV  263 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----TTCEECCCCC-----------------CHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCceeecccccccccccccchhhhcchhhhh
Confidence            4579999997 999999999999999999999999877665542    13333333221                1    


Q ss_pred             --cCCCchhhhcCCcEEEEcCCC
Q 019935          141 --PKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus       141 --~~~~~~~~~~~~d~vi~~a~~  161 (333)
                        .+.+. +.+.++|+||+++..
T Consensus       264 ~~~~~l~-e~l~~aDVVI~tvli  285 (405)
T 4dio_A          264 KQAALVA-EHIAKQDIVITTALI  285 (405)
T ss_dssp             HHHHHHH-HHHHTCSEEEECCCC
T ss_pred             hhHhHHH-HHhcCCCEEEECCcC
Confidence              12344 567899999998754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.87  E-value=0.0018  Score=57.02  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      ++++|.|.||.|.+|..++..|.+.|++|++++|+++
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            3568999999999999999999999999999998764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.87  E-value=0.0016  Score=56.92  Aligned_cols=79  Identities=19%  Similarity=0.218  Sum_probs=52.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCc------------------chhhhhhc----cCCCCceEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDP------------------EKATTLFG----KQDEETLQVCK  135 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~------------------~~~~~~~~----~~~~~~~~~v~  135 (333)
                      .+...+|+|.|+ |++|++++..|+..| -++++++++.                  .|.+...+    ..+.-+++.+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            456679999995 999999999999999 4788888765                  22222211    11133455556


Q ss_pred             ccCCCcCCCchhhh-----------cCCcEEEEcC
Q 019935          136 GDTRNPKDLDPAIF-----------EGVTHVICCT  159 (333)
Q Consensus       136 ~D~~d~~~~~~~~~-----------~~~d~vi~~a  159 (333)
                      .++++.+.++ .++           .++|+||++.
T Consensus       112 ~~l~~~~~~~-~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          112 YNITTVENFQ-HFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCTTSHHHHH-HHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ccCCcHHHHH-HHhhhhcccccccCCCCCEEEECC
Confidence            6665544444 333           5799999876

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.86  E-value=0.00084  Score=61.70  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC-------------cC----
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-------------PK----  142 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d-------------~~----  142 (333)
                      ..+++|+|+|+ |.+|..+++.|...|++|++++|++.+.+...+    -+..++..|..+             .+    
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~  244 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS----MGAEFLELDFKEEAGSGDGYAKVMSDAFIKA  244 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHH----TTCEECCC--------CCHHHHHHSHHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCEEEEecccccccccccchhhccHHHHHH
Confidence            45789999996 999999999999999999999999877655432    133433222211             11    


Q ss_pred             ---CCchhhhcCCcEEEEcCCC
Q 019935          143 ---DLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus       143 ---~~~~~~~~~~d~vi~~a~~  161 (333)
                         .+. +.+.++|+||++++.
T Consensus       245 ~~~~l~-e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          245 EMELFA-AQAKEVDIIVTTALI  265 (401)
T ss_dssp             HHHHHH-HHHHHCSEEEECCCC
T ss_pred             HHHHHH-HHhCCCCEEEECCcc
Confidence               244 556789999999754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.82  E-value=0.004  Score=55.04  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=62.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ++|.|+| +|.+|..++..|+..|  ++|++++|++++.+.+.....      ...+.+...   |   .  +.++++|+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~--~~~~~aDv   72 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W--AALADADV   72 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G--GGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H--HHhCCCCE
Confidence            5899999 7999999999999999  799999999876654432110      112232222   2   2  24578999


Q ss_pred             EEEcCCCCCC----CCCCCCCCCCCcchhHHHHHHHHHhc
Q 019935          155 VICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       155 vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                      ||.+++....    +.   ....+....|+.....+++.+
T Consensus        73 Viiav~~~~~~~~~~g---~~r~~l~~~n~~i~~~i~~~i  109 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPT---GDRFAELKFTSSMVQSVGTNL  109 (309)
T ss_dssp             EEECCSCGGGTC----------CTTHHHHHHHHHHHHHHH
T ss_pred             EEEecCCcccCCCCCC---CCHHHHHHHHHHHHHHHHHHH
Confidence            9999986431    11   112335566777777777755

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.81  E-value=0.0022  Score=57.58  Aligned_cols=32  Identities=34%  Similarity=0.488  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLL  113 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~  113 (333)
                      +++|+|.||+|.+|+.+++.|+++++   +++++.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            35899999999999999999996653   556554

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.80  E-value=0.0046  Score=54.99  Aligned_cols=101  Identities=12%  Similarity=0.121  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.......      .....+...     .++  +.++++|+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-----~d~--~al~~aD~   75 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-----NTY--DDLAGADV   75 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-----CCG--GGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-----CCH--HHhCCCCE
Confidence            358999998 9999999999999997 99999998876543211100      111111110     122  34789999


Q ss_pred             EEEcCCCCCCCCCC--CCCCCCCcchhHHHHHHHHHhc
Q 019935          155 VICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       155 vi~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                      ||.++|...-+...  .....+....|+.-...+.+.+
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i  113 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI  113 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence            99999864211100  0001223444666666666655

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.79  E-value=0.0013  Score=58.97  Aligned_cols=98  Identities=14%  Similarity=0.184  Sum_probs=65.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---hcCCcEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVI  156 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~~~~d~vi  156 (333)
                      ..+.+|||+|+ |.+|...++.+...|++|+++++++++.+...+.    ++.. ..|..+.+..+ .+   ..++|+||
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~-~i~~~~~~~~~-~~~~~~g~~d~vi  237 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL----GAEV-AVNARDTDPAA-WLQKEIGGAHGVL  237 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCSE-EEETTTSCHHH-HHHHHHSSEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc----CCCE-EEeCCCcCHHH-HHHHhCCCCCEEE
Confidence            35679999997 8999999999999999999999998877655432    2221 13554433222 22   24799999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      .+++..                  ......++.++.+ ++++.++..
T Consensus       238 d~~g~~------------------~~~~~~~~~l~~~-G~iv~~G~~  265 (340)
T 3s2e_A          238 VTAVSP------------------KAFSQAIGMVRRG-GTIALNGLP  265 (340)
T ss_dssp             ESSCCH------------------HHHHHHHHHEEEE-EEEEECSCC
T ss_pred             EeCCCH------------------HHHHHHHHHhccC-CEEEEeCCC
Confidence            998642                  1234455566543 578876543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.79  E-value=0.0014  Score=56.27  Aligned_cols=67  Identities=12%  Similarity=0.117  Sum_probs=50.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      ++|.|.| .|.+|+.++..|.+.|++|.+++|++++.+.+.+..   ++.       -..+++ +.+.++|+||.+...
T Consensus         4 m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---g~~-------~~~~~~-~~~~~~D~Vi~~v~~   70 (259)
T 2ahr_A            4 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL---ALP-------YAMSHQ-DLIDQVDLVILGIKP   70 (259)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH---TCC-------BCSSHH-HHHHTCSEEEECSCG
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc---CCE-------eeCCHH-HHHhcCCEEEEEeCc
Confidence            5899999 699999999999999999999999988776654221   111       122345 566789999998853

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.78  E-value=0.0059  Score=57.20  Aligned_cols=41  Identities=24%  Similarity=0.157  Sum_probs=36.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CC-eEEEEEcCcc----hhhhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NI-KSRLLLRDPE----KATTLF  123 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~R~~~----~~~~~~  123 (333)
                      .++|.|.| .|++|..++..|++. |+ +|++++|+++    +.+.+.
T Consensus        18 ~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~   64 (478)
T 3g79_A           18 IKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLN   64 (478)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHT
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHH
Confidence            46899998 699999999999999 99 9999999998    776664

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.77  E-value=0.0027  Score=56.87  Aligned_cols=70  Identities=20%  Similarity=0.238  Sum_probs=42.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +++|.|.||+|.+|+.+++.|.+++   .+++++....+..+.+.  ..+..+.+.  |. |++     .+.++|+||.+
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~--~~~~~i~~~--~~-~~~-----~~~~vDvVf~a   72 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR--FNGKTVRVQ--NV-EEF-----DWSQVHIALFS   72 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE--ETTEEEEEE--EG-GGC-----CGGGCSEEEEC
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee--ecCceeEEe--cC-ChH-----HhcCCCEEEEC
Confidence            4689999999999999999999873   56777663211111111  002222222  22 122     23579999999


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      .|.
T Consensus        73 ~g~   75 (336)
T 2r00_A           73 AGG   75 (336)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.77  E-value=0.0019  Score=58.45  Aligned_cols=100  Identities=12%  Similarity=0.134  Sum_probs=64.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch---hhh--cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~---~~~--~~~d~  154 (333)
                      .+.+|||+|+ |.+|...++.+...|++ |+++++++++.+...+.  ...+.....|-.+.+++.+   +..  .++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI--CPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH--CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--chhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            4678999998 99999999999889987 88899988776655432  2222222333222233331   122  27999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      ||+++|..                  ......++.++.+ ++++.++.
T Consensus       256 vid~~g~~------------------~~~~~~~~~l~~~-G~iv~~G~  284 (363)
T 3m6i_A          256 ALECTGVE------------------SSIAAAIWAVKFG-GKVFVIGV  284 (363)
T ss_dssp             EEECSCCH------------------HHHHHHHHHSCTT-CEEEECCC
T ss_pred             EEECCCCh------------------HHHHHHHHHhcCC-CEEEEEcc
Confidence            99999742                  1234455666654 58887764

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.76  E-value=0.0014  Score=59.53  Aligned_cols=98  Identities=22%  Similarity=0.252  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------cCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------EGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~~~  152 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.    ++.. ..|..+.+..+ .+.       +++
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~-vi~~~~~~~~~-~i~~~~~~~~gg~  254 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GATA-TVDPSAGDVVE-AIAGPVGLVPGGV  254 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCSE-EECTTSSCHHH-HHHSTTSSSTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCCE-EECCCCcCHHH-HHHhhhhccCCCC
Confidence            4679999998 9999999999988998 888888888776544321    2221 13544433222 222       279


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+||+++|..                  ......+++++.+ ++++.++...
T Consensus       255 Dvvid~~G~~------------------~~~~~~~~~l~~~-G~vv~~G~~~  287 (370)
T 4ej6_A          255 DVVIECAGVA------------------ETVKQSTRLAKAG-GTVVILGVLP  287 (370)
T ss_dssp             EEEEECSCCH------------------HHHHHHHHHEEEE-EEEEECSCCC
T ss_pred             CEEEECCCCH------------------HHHHHHHHHhccC-CEEEEEeccC
Confidence            9999998742                  1234455566543 5888766543

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.76  E-value=0.0017  Score=62.57  Aligned_cols=69  Identities=22%  Similarity=0.266  Sum_probs=0.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++++|.|+ |.+|+++++.|.+.|++|++++++++..+.+.        .++.+|.+|++.+++.-++++|.+|-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~--------~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH--------VVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS--------CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC--------CEEEeCCCCHHHHHhcCccccCEEEEECC

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.75  E-value=0.0012  Score=56.94  Aligned_cols=67  Identities=16%  Similarity=0.226  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +++|.|.|+ |.+|+.++..|.+.|++ |.+++|++++.+.+.+..   ++.+.       .+++ +.++++|+||.+..
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~---g~~~~-------~~~~-~~~~~~Dvvi~av~   77 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV---EAEYT-------TDLA-EVNPYAKLYIVSLK   77 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT---TCEEE-------SCGG-GSCSCCSEEEECCC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---CCcee-------CCHH-HHhcCCCEEEEecC
Confidence            458999996 99999999999999998 889999988776654321   23221       2344 44567899988874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.75  E-value=0.00089  Score=61.08  Aligned_cols=75  Identities=23%  Similarity=0.297  Sum_probs=53.1

Q ss_pred             CCCeEEEEc-CCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcE
Q 019935           81 SSKLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~  154 (333)
                      .+.+|||.| |+|.+|...++.+...|++|+++++++++.+.+.+.  +... +  .|..+++..+ ++   .  .++|+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~l--Ga~~-~--~~~~~~~~~~-~v~~~t~~~g~d~  243 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQ--GAVH-V--CNAASPTFMQ-DLTEALVSTGATI  243 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHT--TCSC-E--EETTSTTHHH-HHHHHHHHHCCCE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC--CCcE-E--EeCCChHHHH-HHHHHhcCCCceE
Confidence            456899997 999999999999988999999999998877665432  2211 1  2444433222 22   1  27999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||+++|.
T Consensus       244 v~d~~g~  250 (379)
T 3iup_A          244 AFDATGG  250 (379)
T ss_dssp             EEESCEE
T ss_pred             EEECCCc
Confidence            9999985

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.74  E-value=0.0043  Score=54.92  Aligned_cols=108  Identities=19%  Similarity=0.065  Sum_probs=64.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCcchhhhhhccCCC------CceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ++|.|+|+ |.+|..++..|+..  |++|+++++++++.+........      ....+...     .+++ + ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-----~d~~-~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-----NDYA-D-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-----SCGG-G-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC-----CCHH-H-HCCCCE
Confidence            47999998 99999999999985  79999999998766543210001      11111110     1233 3 778999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~S  201 (333)
                      ||.+++....+   .....+.+..|......+++.++. .. ..++.++
T Consensus        73 Viiav~~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           73 VIITAGLPRKP---GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            99999753211   010112334566666677765532 22 3555543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.73  E-value=0.0023  Score=58.27  Aligned_cols=70  Identities=13%  Similarity=0.174  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++++|+|.|+ |.+|+.+++.+.+.|++|++++.++.......    .  -.++..|..|.+.+. ++.+.+|+|.-
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~----a--d~~~~~~~~d~~~l~-~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV----A--HEFIQAKYDDEKALN-QLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG----S--SEEEECCTTCHHHHH-HHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh----C--CEEEECCCCCHHHHH-HHHHhCCccee
Confidence            45789999995 89999999999999999999988654321111    1  135668999988888 77778998743

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.73  E-value=0.0019  Score=55.36  Aligned_cols=78  Identities=19%  Similarity=0.205  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc-------------------chhhhhhccCC--CCc--eEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD--EET--LQVCK  135 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~~~~~~~~~~--~~~--~~~v~  135 (333)
                      +..++|+|.|+ |++|+++++.|+..|. ++++++++.                   .+.+.+.+...  .+.  ++.+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34579999996 8899999999999995 778887653                   12222111110  223  34444


Q ss_pred             ccCCCcCCCchhhhcCCcEEEEcCC
Q 019935          136 GDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       136 ~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .++.+ +.+. +.+.++|+||++..
T Consensus       105 ~~~~~-~~~~-~~~~~~DvVi~~~d  127 (251)
T 1zud_1          105 QRLTG-EALK-DAVARADVVLDCTD  127 (251)
T ss_dssp             SCCCH-HHHH-HHHHHCSEEEECCS
T ss_pred             ccCCH-HHHH-HHHhcCCEEEECCC
Confidence            44432 3445 66788999999863

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.71  E-value=0.0081  Score=53.53  Aligned_cols=97  Identities=11%  Similarity=0.077  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccC--------CCCceEEEEccCCCcCCCchhhhcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ--------DEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~--------~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .++|.|+|| |.+|..++..|+..|+ +|+++++++++.+......        ...++... .      ++  +.++++
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~------d~--~al~~a   83 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-N------NY--EYLQNS   83 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-S------CG--GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-C------CH--HHHCCC
Confidence            368999997 9999999999999998 9999999987665321000        01112211 1      22  346789


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      |+||.++|...-+.   ..-.+....|+.-...+.+.+.
T Consensus        84 D~VI~avg~p~k~g---~tr~dl~~~n~~i~~~i~~~i~  119 (328)
T 2hjr_A           84 DVVIITAGVPRKPN---MTRSDLLTVNAKIVGSVAENVG  119 (328)
T ss_dssp             SEEEECCSCCCCTT---CCSGGGHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCCCCCC---CchhhHHhhhHHHHHHHHHHHH
Confidence            99999998532111   1111234446666666666553

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.71  E-value=0.0052  Score=51.49  Aligned_cols=73  Identities=15%  Similarity=0.195  Sum_probs=53.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .++.+++|||.|| |-+|...++.|++.|++|++++.+... .+.+..   ..+++++..+..+      ..+.++|.||
T Consensus        27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~---~~~i~~i~~~~~~------~dL~~adLVI   96 (223)
T 3dfz_A           27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEA---KGQLRVKRKKVGE------EDLLNVFFIV   96 (223)
T ss_dssp             ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHH---TTSCEEECSCCCG------GGSSSCSEEE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH---cCCcEEEECCCCH------hHhCCCCEEE
Confidence            3678899999996 899999999999999999999876532 333332   3467777655432      3456799998


Q ss_pred             EcCC
Q 019935          157 CCTG  160 (333)
Q Consensus       157 ~~a~  160 (333)
                      -+.+
T Consensus        97 aAT~  100 (223)
T 3dfz_A           97 VATN  100 (223)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            6654

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=96.70  E-value=0.015  Score=52.05  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=68.2

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|.|.| .|.||+.+++.|...|.+|++++|+++..  .     ...+.+        .+++ +++..+|+|+.
T Consensus       144 ~~l~gktvgIiG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~-----~~~~~~--------~~l~-ell~~aDvV~l  206 (343)
T 2yq5_A          144 NEIYNLTVGLIG-VGHIGSAVAEIFSAMGAKVIAYDVAYNPE--F-----EPFLTY--------TDFD-TVLKEADIVSL  206 (343)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCGG--G-----TTTCEE--------CCHH-HHHHHCSEEEE
T ss_pred             cccCCCeEEEEe-cCHHHHHHHHHHhhCCCEEEEECCChhhh--h-----hccccc--------cCHH-HHHhcCCEEEE
Confidence            456789999999 69999999999999999999999987542  1     112222        2566 78889999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      +.....       .-..++  |    ...+..++.+ .-||++|.....
T Consensus       207 ~~Plt~-------~t~~li--~----~~~l~~mk~g-ailIN~aRg~~v  241 (343)
T 2yq5_A          207 HTPLFP-------STENMI--G----EKQLKEMKKS-AYLINCARGELV  241 (343)
T ss_dssp             CCCCCT-------TTTTCB--C----HHHHHHSCTT-CEEEECSCGGGB
T ss_pred             cCCCCH-------HHHHHh--h----HHHHhhCCCC-cEEEECCCChhh
Confidence            886431       111122  2    2345666654 478888877764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	333
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-19
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	6e-15
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-12
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-12
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-09
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-07
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-07
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	8e-07
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-06
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	8e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	2e-05
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	7e-05
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	0.002
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.002
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	0.002
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.004

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (202), Expect = 3e-19
 Identities = 28/228 (12%), Positives = 61/228 (26%), Gaps = 28/228 (12%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + K + + G +G  G   +A  +    +  +L+RD  +        +             
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVL 56

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
                     G   VI   GT    S           +       + +     + ++V  
Sbjct: 57  QAADVDKTVAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVAC 109

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           +S       +       L  V          +++SGL +  +    + D P T       
Sbjct: 110 TS--AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG------ 161

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI 308
                      +   G      +S+  +    ++ L  +  +G     
Sbjct: 162 --------AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYP 201

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.4 bits (173), Expect = 6e-15
 Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 27/266 (10%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGD 137
           ++   VLV G SG  GQ+V   L   +    ++ L+R  +    + G+ D     +   D
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDAD 60

Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSR------RWDGDNTPEKVDWEGVRNLVSALP 191
           + NP          +T  +        P++       ++    PE+VDW G +N + A  
Sbjct: 61  SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 120

Query: 192 SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGP 251
            +  + ++V         + P + +    +L +K+  E ++  SG P+TIIRAG L D  
Sbjct: 121 VAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE 180

Query: 252 YTSYDLNTLLKATAGERRAVLMGQGDKLI----GEVSRIVVAEACIQALDIEFTEGEIYE 307
                         G  R +L+G+ D+L+      V R  VAE CIQAL  E  + + ++
Sbjct: 181 --------------GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD 226

Query: 308 INSVEGEGPGSDPQKWRELFKAAKAK 333
           + S + EG  +  + ++ LF    ++
Sbjct: 227 LGS-KPEGTSTPTKDFKALFSQVTSR 251

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 65.4 bits (158), Expect = 1e-12
 Identities = 28/247 (11%), Positives = 61/247 (24%), Gaps = 21/247 (8%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K + V G +G  G  ++    +     R  +   +       +     + + +G   N  
Sbjct: 4   KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI-PNVTLFQGPLLNNV 62

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
            L   +FEG  H+     T+        G +  +     G             +  + SS
Sbjct: 63  PLMDTLFEGA-HLAFINTTSQAGDEIAIGKDLADAAKRAGT-----------IQHYIYSS 110

Query: 203 VGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK 262
           +          ++         +         S   +  I     T  PY  + +  +  
Sbjct: 111 MPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPD 170

Query: 263 ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQK 322
            T               +     +  A   I     +   G    +          +   
Sbjct: 171 GTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIAL--------TFETLS 222

Query: 323 WRELFKA 329
             ++  A
Sbjct: 223 PVQVCAA 229

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 63.3 bits (152), Expect = 5e-12
 Identities = 30/251 (11%), Positives = 77/251 (30%), Gaps = 24/251 (9%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQDEETLQVCKGDTRN 140
           VL+ GG+G +G+ +V + +S    + +L R    +      +     +   ++ +     
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS--- 62

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
                  + +    V          S    G  +   ++   +    +   +   +  L 
Sbjct: 63  -------LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVE--AIKEAGNIKRFLP 113

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           S  G+                   K+     ++ + +P+T + +     G +        
Sbjct: 114 SEFGMDPDIMEHALQPG-SITFIDKRKVRRAIEAASIPYTYVSSNMFA-GYFAGSLAQLD 171

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDP 320
                   + ++ G G+     V    V    I+++D   T  +   I       P  + 
Sbjct: 172 GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI------RPPMNI 225

Query: 321 QKWRELFKAAK 331
              +E+ +  +
Sbjct: 226 LSQKEVIQIWE 236

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 56.4 bits (135), Expect = 1e-09
 Identities = 37/254 (14%), Positives = 77/254 (30%), Gaps = 27/254 (10%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-----DPEKATTLFGKQDE--ETLQVC 134
           SK+ L+ G +G  G  +   LL +  +   + R     + E+   ++           + 
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
            GD  +  +L   + E     +   G  +  +  ++       VD  G   L+ A+    
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 191 PSSLKRIVLVSSVGV------TKFNE-LPWSIMNLFGVLKY--KKMGEDFVQKSGLPFTI 241
                R    S+  +          E  P+   + + V K     +  ++ +  G+    
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180

Query: 242 IRA-----GRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL 296
                    R  +   T      +     G    + +G  D L          +     L
Sbjct: 181 GILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240

Query: 297 DIEFTEGEIYEINS 310
             E  + E + I +
Sbjct: 241 QQE--QPEDFVIAT 252

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 49.8 bits (117), Expect = 2e-07
 Identities = 33/144 (22%), Positives = 43/144 (29%), Gaps = 13/144 (9%)

Query: 73  DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET-- 130
           D+ V P     LVLV G +G V   VV  LL    K R   R   K   L  + D +   
Sbjct: 4   DNAVLP--EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG 61

Query: 131 --LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
                   D       D  I                     +  +        G  N + 
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIA-----SVVSFSNKYDEVVTPAIGGTLNALR 116

Query: 188 -SALPSSLKRIVLVSSVGVTKFNE 210
            +A   S+KR VL SS       +
Sbjct: 117 AAAATPSVKRFVLTSSTVSALIPK 140

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 49.4 bits (116), Expect = 2e-07
 Identities = 37/253 (14%), Positives = 76/253 (30%), Gaps = 21/253 (8%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           S   +L+ G +G +G+ V  + L     + LL+R+   ++     Q  E+          
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF--------- 52

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
            K     I  G           A  +                V  + +       +    
Sbjct: 53  -KASGANIVHGSIDDHASL-VEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP 110

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           S  G    N    ++     V + K      ++  G+P+T + +     G +        
Sbjct: 111 SEFGNDVDN--VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA-GYFLRSLAQAG 167

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDP 320
           L A   ++  +L     + +  V    +    I+A+D   T  +   +         ++ 
Sbjct: 168 LTAPPRDKVVILGDGNAR-VVFVKEEDIGTFTIKAVDDPRTLNKTLYL------RLPANT 220

Query: 321 QKWRELFKAAKAK 333
               EL    + K
Sbjct: 221 LSLNELVALWEKK 233

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 49.4 bits (117), Expect = 2e-07
 Identities = 47/264 (17%), Positives = 77/264 (29%), Gaps = 24/264 (9%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLL--------LRDPEKATTLFGKQDEETLQVCKG 136
           +LV GG+G +G   V  LL+                L        L     +  L+   G
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
           D R+      A        I      +   R   G +   + + +G + L+  A+ + + 
Sbjct: 63  DIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 196 RIVLVSSVGV------TKFNE-LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTIIRAGR 246
           R+V VS+  V        + E  P    + +   K     +   + +  GL   I R   
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCN 180

Query: 247 LTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGE 304
              GPY   +  +   +          L G G  +   V            L      GE
Sbjct: 181 NY-GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG-RAGE 238

Query: 305 IYEINSVEGEGPGSDPQKWRELFK 328
           IY I                +   
Sbjct: 239 IYHIGGGLELTNRELTGILLDSLG 262

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 8e-07
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 22/195 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--------EKATTLFGKQDEETLQVC 134
            + L+ G +G  G  +   LL +  +   ++R          E          E  +++ 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
            GD  +   L   I E     I   G  +     +D       VD  G   L+ A+    
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121

Query: 191 PSSLKRIVLVSSVGV------TKFNE-LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTI 241
             +  +    S+  +          E  P+   + +G  K     +  +F +   L    
Sbjct: 122 LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 181

Query: 242 IRAGRLTDGPYTSYD 256
                    P    +
Sbjct: 182 GILFNHE-SPRRGAN 195

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (105), Expect = 6e-06
 Identities = 22/195 (11%), Positives = 55/195 (28%), Gaps = 35/195 (17%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + + V +AG  G VG  +   L  R     +L    E                   +  +
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLD 42

Query: 141 PKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIV 198
            + +      E +  V                       +     N++ +A  + + +++
Sbjct: 43  SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 102

Query: 199 LVSSVGV------------TKFNELPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTIIRA 244
            + S  +                         + + K    K+ E + ++ G  +  +  
Sbjct: 103 FLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMP 162

Query: 245 GRLTDGPYTSYDLNT 259
             L  GP+ ++  + 
Sbjct: 163 TNLY-GPHDNFHPSN 176

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 8e-06
 Identities = 32/238 (13%), Positives = 79/238 (33%), Gaps = 25/238 (10%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K +L+ GG+G VG  +   L+    +  ++    +   T   +  E  +     +  N  
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVV----DNFFTGRKRNVEHWIGHENFELINHD 57

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
            ++P ++  V  +       + P+  ++   T  K +  G  N++        R++L S+
Sbjct: 58  VVEP-LYIEVDQIYHLASPASPPNYMYNPIKT-LKTNTIGTLNMLGLAKRVGARLLLAST 115

Query: 203 VGVTKFNEL------------PWSIMNLFGVLKY--KKMGEDFVQKSGLPFTIIRAGRLT 248
             V    E+            P      +   K   + M   ++++ G+   + R     
Sbjct: 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175

Query: 249 DGPYTSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE 302
            GP    +    ++  +          + G G +         +    +  ++   + 
Sbjct: 176 -GPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS 232

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (100), Expect = 2e-05
 Identities = 34/252 (13%), Positives = 72/252 (28%), Gaps = 32/252 (12%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
            +K V + G SG  G++++  +L + + S++ L    K T           +V   +  +
Sbjct: 13  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 72

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
                    +     +  T   A        D        E  +          K   L+
Sbjct: 73  DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA------GGCKHFNLL 126

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
           SS G  K +   +  +         ++     +     +++ R G L      S     L
Sbjct: 127 SSKGADKSSNFLYLQVKG-------EVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWL 179

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDP 320
           ++   G      +         V  + V  A +  +          ++  +E +      
Sbjct: 180 VRKFFG-----SLPDSWASGHSVPVVTVVRAMLNNV----VRPRDKQMELLENK------ 224

Query: 321 QKWRELFKAAKA 332
                +    KA
Sbjct: 225 ----AIHDLGKA 232

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 43.6 bits (101), Expect = 2e-05
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLL--LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           +L+ GG G +G  + +  LS+ I   +   L        L         +   GD RN  
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
           D+   I + +             +   D      +++  G  NL+ A+        ++
Sbjct: 63  DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.6 bits (99), Expect = 4e-05
 Identities = 23/176 (13%), Positives = 50/176 (28%), Gaps = 22/176 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G  G +   +   L                       +D    +    D R  ++ 
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDW----KKNEHMTEDMFCDEFHLVDLRVMENC 73

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
              + EGV HV                 +     +     N++ +A  + +KR    SS 
Sbjct: 74  LK-VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132

Query: 204 GVTKFNELPWSIM--------------NLFGVLKYK--KMGEDFVQKSGLPFTIIR 243
            +    +   +                + FG+ K    ++ + + +  G+   I R
Sbjct: 133 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 35/260 (13%), Positives = 75/260 (28%), Gaps = 36/260 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET---LQVCKGDTRNP 141
           +L+ GG+G +G  VV  ++     + + +     A  L    D            D  + 
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----------P 191
            ++     +     +      +   R   G     + +  G   L+              
Sbjct: 63  AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122

Query: 192 SSLKRIVLVSSVGV-----------------TKFNELPWSIMNLFGVLKYK--KMGEDFV 232
            +  R   +S+  V                        ++  + +   K     +   + 
Sbjct: 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR 182

Query: 233 QKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE 290
           +  GLP  +        GPY   +  +  ++      +   + G+GD++   +     A 
Sbjct: 183 RTYGLPTIVTNCSNNY-GPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241

Query: 291 ACIQALDIEFTEGEIYEINS 310
           A    +  E   GE Y I  
Sbjct: 242 ALHMVVT-EGKAGETYNIGG 260

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.9 bits (94), Expect = 7e-05
 Identities = 32/229 (13%), Positives = 66/229 (28%), Gaps = 26/229 (11%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + K VL+AG +G  G+ ++  +LS    ++++            ++              
Sbjct: 1   TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP---------ARKALAEHPRLDNPVGP 51

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
             +L P +   +    CC GTT   +   +         +  V   +          +  
Sbjct: 52  LAELLPQLDGSIDTAFCCLGTTIKEAGSEE--------AFRAVDFDLPLAVGKRALEMGA 103

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTL 260
               V             +  +K +   +   ++     TI R   L  GP   + L  +
Sbjct: 104 RHYLVVSALGADAKSSIFYNRVKGELE-QALQEQGWPQLTIARPSLLF-GPREEFRLAEI 161

Query: 261 LKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEIN 309
           L        A +          +    +A A  +    E       E +
Sbjct: 162 L-------AAPIARILPGKYHGIEACDLARALWRLALEEGKGVRFVESD 203

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 19/181 (10%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQDEETLQ 132
           +  K+ L+ G +G +G  ++ +LL  + K       +    R+ ++  +L  ++     +
Sbjct: 14  AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73

Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-- 190
             +GD RN  D + A       +      +   S   +   T    + +G  N++ A   
Sbjct: 74  FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRS--INDPITSNATNIDGFLNMLIAARD 131

Query: 191 PSSLKRIVLVSSVGVTKFNELPWS------IMNLFGVLKY--KKMGEDFVQKSGLPFTII 242
                     SS        LP         ++ + V KY  +   + F +  G     +
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191

Query: 243 R 243
           R
Sbjct: 192 R 192

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 36/240 (15%), Positives = 66/240 (27%), Gaps = 23/240 (9%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEKATTLFGKQDEETLQVCKGDT 138
           SK+VLV GG+G +G   V  L+       +   L      +        +  +   + D 
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIV 198
            + K L+    E     +                      +  G   L+  +        
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120

Query: 199 LVSSVGVTKFN------------ELPWSIMNLFGVLKYK--KMGEDFVQ--KSGLPFTII 242
           + SS      +            E P    N +G  KY    +  D     K    F I+
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAIL 180

Query: 243 RAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTE 302
           R       P  ++    + +   G    +L       +G   ++ +      + D     
Sbjct: 181 RYF----NPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 20/214 (9%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRN 140
           +  LV G +G  G  +   LL +  +   L+      T    ++   E  +Q   GD  +
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIV 198
              +  A+ +     +      +F    W+   T   VD  GV +L+ A+   S   R  
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 199 LVSSVGVTKFN-------ELPWSIMNLFGVLKY--KKMGEDFVQKSGLPFTIIRAGRLTD 249
             S+  +             P+   + +GV K     +  ++ +  GL  +         
Sbjct: 121 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHE- 179

Query: 250 GPYTSYD------LNTLLKATAGERRAVLMGQGD 277
            P    +       + + +   G+++ + +G  D
Sbjct: 180 SPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVD 213

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (90), Expect = 4e-04
 Identities = 23/197 (11%), Positives = 51/197 (25%), Gaps = 23/197 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--------EKATTLFGKQDEETLQVC 134
           K+ L+ G +G  G  +   LL +  +   L+R                    ++  +++ 
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA----- 189
             D  +   L   I       +      +  +  ++  +    V   G   L+ A     
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121

Query: 190 -LPSSLKRIVLVSSVGVTKFNELPWS------IMNLFGVLKYK--KMGEDFVQKSGLPFT 240
                  +     S  +      P S        + +   K        ++ +  GL   
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFAC 181

Query: 241 IIRAGRLTDGPYTSYDL 257
                     P    + 
Sbjct: 182 NGILFNHE-SPRRGENF 197

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 5e-04
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 1/108 (0%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-GKQDEETLQVCKGDTRNP 141
           K V V G +G  G  +   L +     +          +LF   +  + +Q   GD R+ 
Sbjct: 9   KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 68

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
             L  +I E    ++            +         +  G   L+ A
Sbjct: 69  NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEA 116

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.3 bits (88), Expect = 7e-04
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 9/119 (7%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
           S   V+V G + G+G  +V  L+       ++   RD EKAT L   +D   + V     
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-VHVLPLTV 60

Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191
              K LD  +             +         S   + +     +  +   N  S + 
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 20/163 (12%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + VL+ GG+ G+G+ +V   ++   K  +L +  E+   L     +  L    GD R+ +
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVL-GIVGDVRSLE 64

Query: 143 DLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGV--RNLVS------ 188
           D   A       F  +  +I   G   + +   D         ++ V   N+        
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124

Query: 189 -ALPSSLKR----IVLVSSVGVTKFNELPWSIMNLFGVLKYKK 226
             LP+ +      I  +S+ G       P        ++   +
Sbjct: 125 ACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVR 167

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 2/85 (2%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           VL+ G +G +G  +   LL  +      L     A + F           +GD     + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH--FHFVEGDISIHSEW 60

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRW 169
                +    V+             
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTR 85

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP 141
           +K+ ++ G SGG+GQ +   L +  + SRL L D      +                   
Sbjct: 1   AKVAVL-GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLG 58

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLV 200
            +  P   +G   V+   G    P +     +     +   V  L +A        ++ +
Sbjct: 59  PEQLPDCLKGCDVVVIPAG---VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI 115

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKK 226
            S  V     +   +    GV    K
Sbjct: 116 ISNPVNSTIPITAEVFKKHGVYNPNK 141

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 25/196 (12%), Positives = 56/196 (28%), Gaps = 23/196 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---ETLQVCKGDTR 139
           K ++V GG+G +G   V  + + +    + + D           +    + +++  GD  
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62

Query: 140 NPKDLDPAIFEGVTHVIC-----------------CTGTTAFPSRRWDGDNTPEKVDWEG 182
           + + +D    +    V                    T      +          +     
Sbjct: 63  DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122

Query: 183 VRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--KMGEDFVQKSGLPFT 240
              +   LP            G     E  ++  + +   K     + + +V+  G+  T
Sbjct: 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182

Query: 241 IIRAGRLTDGPYTSYD 256
           I        GPY   +
Sbjct: 183 ISNCSNNY-GPYQHIE 197

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 22/162 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDT 138
           +L LV G SGG+G  V  +L+ + +K     R        A          TL   + D 
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 70

Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAF-PSRRWDGDNTPEKVD---WEGVRNLVS 188
            N +D+            GV   I   G                +  +            
Sbjct: 71  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130

Query: 189 ALPSSLK------RIVLVSSVGVTKFNELPWSIMNLFGVLKY 224
           A  S  +       I+ ++S+       LP S+ + +   KY
Sbjct: 131 AYQSMKERNVDDGHIININSMSG--HRVLPLSVTHFYSATKY 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	333
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.98
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.98
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.97
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.97
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.95
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.95
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.95
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.95
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.95
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.95
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.95
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.94
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.94
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.94
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.94
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.94
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.94
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.94
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.94
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.94
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.94
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.94
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.94
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.94
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.94
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.93
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.93
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.93
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.93
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.93
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.93
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.93
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.92
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.92
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.92
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.92
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.91
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.91
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.91
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.91
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.9
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.9
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.9
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.9
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.89
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.89
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.89
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.89
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.87
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.86
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.85
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.84
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.84
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.83
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.82
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.81
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.81
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.8
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.8
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.8
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.79
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.78
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.78
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.77
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.76
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.74
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.72
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.41
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.58
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.42
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.39
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.26
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.16
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.14
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.05
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.03
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.02
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.97
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.96
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.9
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.89
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.87
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.86
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.85
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.84
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.83
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.79
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.79
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.78
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.78
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.77
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.77
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.77
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.72
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.7
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.69
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.69
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.65
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.65
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.64
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.62
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.61
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.6
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.55
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.52
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.51
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.49
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.47
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.47
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.45
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.45
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.42
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.4
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.38
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.38
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.38
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.34
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.31
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.27
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.27
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.26
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.24
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.23
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.2
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.19
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.19
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.18
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.16
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.09
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.05
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.03
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.0
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.94
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.94
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.91
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.9
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.87
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.86
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.81
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.79
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.78
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.73
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.72
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.66
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.65
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.62
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.61
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.61
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.58
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.58
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.57
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.56
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.52
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	96.52
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.5
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.47
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.27
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.27
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.24
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.23
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.23
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.22
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.22
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.21
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.04
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.04
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.02
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.0
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.99
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.97
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.93
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.9
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.88
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.86
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.85
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.84
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.8
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.79
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.79
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.76
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.74
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.71
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.69
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.64
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.64
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.61
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.5
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.42
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.39
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.28
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.17
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.16
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.14
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.1
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.06
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.01
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.88
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.75
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.68
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.68
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.58
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.58
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.4
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.23
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.19
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.18
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.18
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.08
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.03
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.92
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.9
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.7
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.33
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.24
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	92.98
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.95
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.84
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.84
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.79
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.75
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.06
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.05
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.95
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.8
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.58
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.52
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	91.27
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.26
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.17
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.15
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.1
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.01
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.88
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.7
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.56
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.5
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.45
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.32
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.26
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	90.25
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	89.95
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.47
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.25
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.04
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	89.04
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	89.03
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.02
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	88.99
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.94
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	88.82
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.73
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.57
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.56
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	87.83
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.68
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.64
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.38
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.07
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.76
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.65
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	86.62
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	86.48
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.35
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.8
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	85.64
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.53
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.39
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	84.99
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	84.76
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	84.55
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	84.41
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	84.26
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	84.12
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	83.95
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.71
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	83.46
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.23
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	82.46
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.41
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	82.4
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.35
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	82.29
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.97
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	81.89
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.88
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.83
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.82
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.6
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	81.59
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	81.03
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	80.96
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	80.89
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.84
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	80.76
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	80.57

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.3e-34  Score=261.17  Aligned_cols=238  Identities=15%  Similarity=0.165  Sum_probs=177.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhc--cCCCCceEEEEccCCCcCCCchhhhcC--Cc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFG--KQDEETLQVCKGDTRNPKDLDPAIFEG--VT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~--~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d  153 (333)
                      |+|||||||||||++|+++|+++|++|++++|....     .+.+..  .....+++++++|++|.++++ +.+.+  +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLT-RILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHH-HHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHH-HHHhccCCC
Confidence            689999999999999999999999999999995432     222211  111568999999999999999 88874  59


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C---CCeEEEEeccccccC-------CCCCccchhhhHHH
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S---LKRIVLVSSVGVTKF-------NELPWSIMNLFGVL  222 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~---~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~  222 (333)
                      +|||+|+..+.. ..+.++..++++|+.|+.+|+++++. +   ++|||++||.++||.       |+.+..|.+.|+.+
T Consensus        81 ~v~h~aa~~~~~-~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~s  159 (357)
T d1db3a_          81 EVYNLGAMSHVA-VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA  159 (357)
T ss_dssp             EEEECCCCCTTT-TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred             EEEEeecccccc-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHH
Confidence            999999987643 23445556789999999999998853 3   458999999999973       33455677788866


Q ss_pred             HHH--HHHHHHHHhcCCCEEEEEcccccCCCCCCcc-----hHH-HHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          223 KYK--KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-----LNT-LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       223 k~k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      |..  ..++.+.++++++++++||+++ |||+....     +.. +.....+......+|+++..++++|++|+|++++.
T Consensus       160 K~~~E~~~~~~~~~~~l~~~ilR~~~v-yGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~  238 (357)
T d1db3a_         160 KLYAYWITVNYRESYGMYACNGILFNH-ESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM  238 (357)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeccc-cCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence            542  2333444567999999999965 88864322     222 22333345556677899999999999999999999


Q ss_pred             hccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+  .++.||+++|       ...++.|+++.+.+
T Consensus       239 ~~~~~--~~~~yni~sg-------~~~s~~~~~~~~~~  267 (357)
T d1db3a_         239 MLQQE--QPEDFVIATG-------VQYSVRQFVEMAAA  267 (357)
T ss_dssp             TTSSS--SCCCEEECCC-------CCEEHHHHHHHHHH
T ss_pred             HHhCC--CCCeEEECCC-------CceehHHHHHHHHH
Confidence            99875  4679999996       66899999998765

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-32  Score=228.71  Aligned_cols=201  Identities=20%  Similarity=0.243  Sum_probs=165.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+|||+||||||+||++++++|+++|++|++++|++++.....    ..+++++.+|++|.+++. +++.++|+|||++|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~gD~~d~~~l~-~al~~~d~vi~~~g   76 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADVD-KTVAGQDAVIVLLG   76 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS----CCCSEEEESCTTSHHHHH-HHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc----ccccccccccccchhhHH-HHhcCCCEEEEEec
Confidence            4689999999999999999999999999999999988765543    567999999999999999 89999999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCE
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF  239 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~  239 (333)
                      ...        .....+++..++.++++++++ +++|||++||.+++.+.........  .+.+.|..+|+++++.|++|
T Consensus        77 ~~~--------~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~--~~~~~~~~~e~~l~~~~~~~  146 (205)
T d1hdoa_          77 TRN--------DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQ--AVTDDHIRMHKVLRESGLKY  146 (205)
T ss_dssp             CTT--------CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGH--HHHHHHHHHHHHHHHTCSEE
T ss_pred             cCC--------chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccccccc--ccchHHHHHHHHHHhcCCce
Confidence            642        223457889999999998865 9999999999998765443332222  34477888999999999999


Q ss_pred             EEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          240 TIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       240 ~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      ++|||+.++.++...              ......++.....+++++|+|+++++++++++..|+.+.+++
T Consensus       147 tiirp~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~  203 (205)
T d1hdoa_         147 VAVMPPHIGDQPLTG--------------AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (205)
T ss_dssp             EEECCSEEECCCCCS--------------CCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             EEEecceecCCCCcc--------------cEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence            999999886555432              223344566677899999999999999999887789888875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-33  Score=247.58  Aligned_cols=231  Identities=13%  Similarity=0.151  Sum_probs=171.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .|+||||||+||||++|+++|+++|++|++++|... ....+........+++.     +.+.++ .++.++|+|||+|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~-----~~~~~~-~~~~~~d~VihlAa   74 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI-----NHDVVE-PLYIEVDQIYHLAS   74 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEE-----ECCTTS-CCCCCCSEEEECCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEE-----ehHHHH-HHHcCCCEEEECcc
Confidence            378999999999999999999999999999987432 22222211113334444     444455 55668999999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC------------CCccchhhhHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~------------~~~~~~~~~~~~k~k~~  227 (333)
                      ....+. ....+...+++|+.|+.+++++++. ++ |+||+||.++|+...            .+..|.+.|+.+  |..
T Consensus        75 ~~~~~~-~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~s--K~~  150 (312)
T d2b69a1          75 PASPPN-YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG--KRV  150 (312)
T ss_dssp             CCSHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHH--HHH
T ss_pred             cCCchh-HHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHH--HHH
Confidence            765221 1233455789999999999998866 54 899999999997422            234566777755  544


Q ss_pred             HHHHH----HhcCCCEEEEEcccccCCCCCCc----chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          228 GEDFV----QKSGLPFTIIRAGRLTDGPYTSY----DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       228 ~e~~l----~~~gi~~~~vrpg~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      +|.++    +.+|++++++||+.+ |||+...    .++.++..+..+..+.+++++.+.++|+|++|++++++.+++..
T Consensus       151 ~E~~~~~~~~~~~~~~~~lR~~~v-yGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~  229 (312)
T d2b69a1         151 AETMCYAYMKQEGVEVRVARIFNT-FGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  229 (312)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCE-ECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHhCCcEEEEEeeeE-ECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc
Confidence            55444    567999999999965 8887532    24566666666777778899999999999999999999998764


Q ss_pred             ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          300 FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       300 ~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                        .++.||+++|       ...++.|+++.+++
T Consensus       230 --~~~~~n~~~~-------~~~~~~~~~~~i~~  253 (312)
T d2b69a1         230 --VSSPVNLGNP-------EEHTILEFAQLIKN  253 (312)
T ss_dssp             --CCSCEEESCC-------CEEEHHHHHHHHHH
T ss_pred             --cCCceEecCC-------cccchhhHHHHHHH
Confidence              3568999996       88999999998865

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.98  E-value=2.1e-32  Score=249.43  Aligned_cols=237  Identities=16%  Similarity=0.191  Sum_probs=180.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |+||||||+||||++|+++|+++|++|++..++..   ....+.......+++++++|++|.+.+. .+++  .+|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~-~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEIT-RIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHH-HHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHH-HHHHhCCCCEEEE
Confidence            48999999999999999999999998655444321   1222222223568999999999999998 7776  5899999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC----------CCCeEEEEeccccccCC-----------------C
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKFN-----------------E  210 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----------~~~~~v~~SS~~~~~~~-----------------~  210 (333)
                      +|+..+.+ ..+..+..++++|+.|+.+++++++.          ++++||++||..+|+..                 .
T Consensus        80 lAa~~~~~-~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~  158 (361)
T d1kewa_          80 LAAESHVD-RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             CCSCCCHH-HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             Cccccchh-hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence            99875422 12234456789999999999998742          34699999999999732                 2


Q ss_pred             CCccchhhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCccccccc
Q 019935          211 LPWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVS  284 (333)
Q Consensus       211 ~~~~~~~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  284 (333)
                      .+..+.+.||.+  |..+|.++    ++.|++++++||+.+ |||+...  .++.++..+..++.+.+++++++.++|+|
T Consensus       159 ~~~~p~s~Yg~s--K~~~E~~~~~~~~~~~i~~~~lR~~~v-yGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~  235 (361)
T d1kewa_         159 TAYAPSSPYSAS--KASSDHLVRAWRRTYGLPTIVTNCSNN-YGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY  235 (361)
T ss_dssp             SCCCCCSHHHHH--HHHHHHHHHHHHHHHCCCEEEEEECEE-ESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred             CCCCCCCHHHHH--HHHHHHHHHHHHHHhCCCEEEEecCce-ECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEE
Confidence            334556778855  55555554    457999999999966 7887532  35666666666777778899999999999


Q ss_pred             HHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|+|++++.++++... +++||+++|       ...++.|+++.+.+
T Consensus       236 v~D~a~ai~~~~~~~~~-~~~~Ni~s~-------~~~s~~~~~~~i~~  275 (361)
T d1kewa_         236 VEDHARALHMVVTEGKA-GETYNIGGH-------NEKKNLDVVFTICD  275 (361)
T ss_dssp             HHHHHHHHHHHHHHCCT-TCEEEECCC-------CEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCC-CCeEEECCC-------CCcchHHHHhHhhh
Confidence            99999999999988654 779999986       77899999988753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.98  E-value=1.7e-32  Score=246.14  Aligned_cols=237  Identities=21%  Similarity=0.208  Sum_probs=182.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEE------EEcCc--chhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRL------LLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~------~~R~~--~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |+|||||||||||++|++.|+++|++|++      +++..  .....+.......+++++.+|+.+..... .....+|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLA-RELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHH-HHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhh-ccccccce
Confidence            58999999999999999999999986544      33221  11111221122668999999999998888 77889999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccC-------CCCCccchhhhHHHHHHH
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k~  226 (333)
                      |+|+|+..... .........+++|+.|+.+++++++ .++++||++||.++|+.       ++.+..+.+.||.+|  .
T Consensus        80 vi~~a~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK--~  156 (322)
T d1r6da_          80 IVHFAAESHVD-RSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK--A  156 (322)
T ss_dssp             EEECCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHH--H
T ss_pred             EEeeccccccc-ccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHH--H
Confidence            99999875321 1112334567899999999999885 48899999999999973       445566778888665  4


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCCc--chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTSY--DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                      .+|.++    ++++++++++||+.+ |||+...  .++.++..+..+..+.+++++++.++|+|++|+|++++.+++++.
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~v-yGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~  235 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNN-YGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR  235 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEE-ECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeE-ECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC
Confidence            444444    567999999999965 8887543  366677767767777788999999999999999999999998865


Q ss_pred             cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          301 TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       301 ~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      . +++||++++       ...++.|+++.+.+
T Consensus       236 ~-~~~~ni~~~-------~~~s~~e~~~~i~~  259 (322)
T d1r6da_         236 A-GEIYHIGGG-------LELTNRELTGILLD  259 (322)
T ss_dssp             T-TCEEEECCC-------CEEEHHHHHHHHHH
T ss_pred             C-CCeeEEeec-------ccchhHHHHHHHHH
Confidence            4 789999986       78899999988764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=3.6e-31  Score=241.27  Aligned_cols=235  Identities=16%  Similarity=0.069  Sum_probs=179.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +.|+||||||+||||++|+++|+++|++|++++|.........    ....++..+|+.+.+.+. .++.++|+|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~----~~~~~~~~~D~~~~~~~~-~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCL-KVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHH-HHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh----cccCcEEEeechhHHHHH-HHhhcCCeEeeccc
Confidence            6678999999999999999999999999999987654322111    335577889999988888 78899999999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCC--------------CCCccchhhhHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------------ELPWSIMNLFGVLKYK  225 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~--------------~~~~~~~~~~~~~k~k  225 (333)
                      ..................|+.++.+++++++ .++++||++||..+|+..              ..+..+.+.|+.+  |
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~s--K  166 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE--K  166 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH--H
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHH--H
Confidence            7642211133344567889999999999885 589999999999998731              1233456778855  4


Q ss_pred             HHHHHHH----HhcCCCEEEEEcccccCCCCCCcc-------hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          226 KMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD-------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       226 ~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      ..+|+++    ++.|++++++||+.+ ||++....       ...+............++++.+.++|+|++|++++++.
T Consensus       167 ~~~E~~~~~~~~~~gl~~~ilR~~~v-yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~  245 (363)
T d2c5aa1         167 LATEELCKHYNKDFGIECRIGRFHNI-YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  245 (363)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeE-eccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence            4555444    456999999999965 78765321       22233334445666788899999999999999999999


Q ss_pred             hccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          295 ALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++.+  .++.||++++       ..+++.|+++.+++
T Consensus       246 ~~~~~--~~~~~ni~~~-------~~~s~~~l~~~i~~  274 (363)
T d2c5aa1         246 LTKSD--FREPVNIGSD-------EMVSMNEMAEMVLS  274 (363)
T ss_dssp             HHHSS--CCSCEEECCC-------CCEEHHHHHHHHHH
T ss_pred             HHhCC--CCCeEEEecC-------CcccHHHHHHHHHH
Confidence            98764  3678999996       77999999998865

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=3.9e-31  Score=239.09  Aligned_cols=240  Identities=16%  Similarity=0.165  Sum_probs=183.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch----hhh---hhccCCCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATT---LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~----~~~---~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      +.|+|||||||||||++|+++|+++|++|++++|....    ...   .........++++.+|+.|...+. ....+.+
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~-~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN-NACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH-HHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccc-ccccccc
Confidence            45799999999999999999999999999999873321    111   111111457899999999998887 7788899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-------CCCCccchhhhHHHHHH
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYK  225 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k  225 (333)
                      .++|+++....+. ...++...+++|+.|+.+++++|+. ++++||++||.++|+.       ++.+..+.+.|+.+|  
T Consensus        94 ~v~~~~a~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK--  170 (341)
T d1sb8a_          94 YVLHQAALGSVPR-SINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK--  170 (341)
T ss_dssp             EEEECCSCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH--
T ss_pred             ccccccccccccc-cccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHH--
Confidence            9999998654221 1223344788999999999998854 8899999999999984       345667778888655  


Q ss_pred             HHHHHH----HHhcCCCEEEEEcccccCCCCCCc------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          226 KMGEDF----VQKSGLPFTIIRAGRLTDGPYTSY------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       226 ~~~e~~----l~~~gi~~~~vrpg~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      ..+|.+    .++.+++++++||+.+ ||+....      .+..+...+..+..+.+++++.+.++|+|++|+|.++..+
T Consensus       171 ~~~E~~~~~~~~~~~i~~~ilR~~~v-~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~  249 (341)
T d1sb8a_         171 YVNELYADVFSRCYGFSTIGLRYFNV-FGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLA  249 (341)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEEECCE-ECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEecee-eccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhh
Confidence            445544    4566899999999966 6775421      2344555555566778889999999999999999999998


Q ss_pred             ccCcc-cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          296 LDIEF-TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       296 l~~~~-~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..+. ..++.|+++++       ...++.|+++.|++
T Consensus       250 ~~~~~~~~~~~~~~~~~-------~~~si~~i~~~i~~  280 (341)
T d1sb8a_         250 ATAGLDARNQVYNIAVG-------GRTSLNQLFFALRD  280 (341)
T ss_dssp             HTCCGGGCSEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             hhccccccceeeeeccc-------ccchHHHHHHHHHH
Confidence            87653 45789999985       77999999998864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.4e-30  Score=235.42  Aligned_cols=237  Identities=17%  Similarity=0.135  Sum_probs=178.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      |+|||||||||||++|+++|+++| ++|+++++.......+..   ..+++++++|+++.+.+.+..+.++|+|||+|+.
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~---~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc---CCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            489999999999999999999999 589999887655554443   6789999999999877663467789999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC--------------CCccchhhhHHHHHHHH
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE--------------LPWSIMNLFGVLKYKKM  227 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~--------------~~~~~~~~~~~~k~k~~  227 (333)
                      ..... ....+...+++|+.|+.+++++++....+++++||..+|+...              ....+...|+.+  |..
T Consensus        78 ~~~~~-~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~s--K~~  154 (342)
T d2blla1          78 ATPIE-YTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS--KQL  154 (342)
T ss_dssp             CCHHH-HHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHH--HHH
T ss_pred             ccccc-cccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhc--ccc
Confidence            64211 1122234678999999999998865445777889998887322              112344567754  555


Q ss_pred             HHHHH----HhcCCCEEEEEcccccCCCCCCc----------chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          228 GEDFV----QKSGLPFTIIRAGRLTDGPYTSY----------DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       228 ~e~~l----~~~gi~~~~vrpg~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      +|.++    ++.|++++++||+.+ +|++...          ....++..+..+..+.++++++..++|+|++|+|+++.
T Consensus       155 ~E~~~~~~~~~~~~~~~i~r~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~  233 (342)
T d2blla1         155 LDRVIWAYGEKEGLQFTLFRPFNW-MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  233 (342)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECSE-ECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred             hhhhhhhhhcccCceeEEeecccc-ccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence            66555    456999999999966 6765321          13455555555677788899999999999999999999


Q ss_pred             HhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .+++++.  ..+++||+++|      ....++.|+++.|.+
T Consensus       234 ~~~~~~~~~~~g~~~Nig~~------~~~~t~~~l~~~i~~  268 (342)
T d2blla1         234 RIIENAGNRCDGEIINIGNP------ENEASIEELGEMLLA  268 (342)
T ss_dssp             HHHHCGGGTTTTEEEEECCT------TSEEEHHHHHHHHHH
T ss_pred             eehhhccccCCCeEEEEecc------cchhHHHHHHHHHHH
Confidence            9998753  45889999875      256899999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=1.3e-30  Score=236.20  Aligned_cols=238  Identities=15%  Similarity=0.156  Sum_probs=179.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc---hhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +|+|||||||||||++|+++|+++|++|.+++++.-   ............+++++.+|++|.+.+. .++.+.|.|+|+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~-~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVD-KLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHH-HHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHH-HHHhhhhhhhhh
Confidence            579999999999999999999999998777765421   1111111112678999999999999998 889999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccC-------------------CCCCccchhhh
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF-------------------NELPWSIMNLF  219 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~-------------------~~~~~~~~~~~  219 (333)
                      |+...... ...++...+++|+.|+.+++++++....++|++||..+|+.                   +..+..+.+.|
T Consensus        81 a~~~~~~~-~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDN-SLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHH-HHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccc-hhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            98764211 11234567889999999999988663468999999999863                   11234456778


Q ss_pred             HHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCC--cchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          220 GVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTS--YDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       220 ~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |.+|  ..+|.++    +..|++++++||+.+ |||+..  ..+..++.....+.....++++...++++|++|+|++++
T Consensus       160 ~~sK--~~~E~~~~~~~~~~~i~~~ilR~~~v-yGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~  236 (346)
T d1oc2a_         160 SSTK--AASDLIVKAWVRSFGVKATISNCSNN-YGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW  236 (346)
T ss_dssp             HHHH--HHHHHHHHHHHHHHCCEEEEEEECCE-ESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred             HHHH--HHHHHHHHHHHHHcCCCEEEEeecce-eCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHH
Confidence            8655  4455444    567999999999955 888653  334445555555666778899999999999999999999


Q ss_pred             HhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++.++.. +..|++.++       ...++.|+++.+.+
T Consensus       237 ~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~i~~  267 (346)
T d1oc2a_         237 AILTKGRM-GETYLIGAD-------GEKNNKEVLELILE  267 (346)
T ss_dssp             HHHHHCCT-TCEEEECCS-------CEEEHHHHHHHHHH
T ss_pred             HHHhhccc-Ccccccccc-------ccccchHHHHHHHH
Confidence            98887654 678899885       77899999888754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.3e-30  Score=233.81  Aligned_cols=238  Identities=18%  Similarity=0.196  Sum_probs=171.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh---hhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |+||||||+||||++|+++|+++|++|++++|......   ...+.....+++++++|++|.+.+. ++++  ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~-~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMT-EILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHH-HHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHH-HHHhccCCCEEEE
Confidence            57999999999999999999999999999987322211   1111111568999999999999998 7776  7999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC--------CCccchhhhHHHHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMG  228 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~--------~~~~~~~~~~~~k~k~~~  228 (333)
                      +|+....+ .....+...+++|+.|+.+++++++. ++++||++||.++|+...        ....+...|+.+  |..+
T Consensus        80 lAa~~~~~-~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~s--K~~~  156 (338)
T d1udca_          80 FAGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS--KLMV  156 (338)
T ss_dssp             CCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH--HHHH
T ss_pred             CCCccchh-hHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHH--Hhhh
Confidence            99975422 11223346789999999999999865 899999999999987422        123456667755  4455


Q ss_pred             HHHHH-----hcCCCEEEEEcccccCCCCCCc------------chHHHHHHhhcc-cceeecCC------CCccccccc
Q 019935          229 EDFVQ-----KSGLPFTIIRAGRLTDGPYTSY------------DLNTLLKATAGE-RRAVLMGQ------GDKLIGEVS  284 (333)
Q Consensus       229 e~~l~-----~~gi~~~~vrpg~~~~g~~~~~------------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~i~  284 (333)
                      |.++.     ..+++++++||+.+ ||++...            .++.+....... ..+.++|+      +...++|+|
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v-~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~  235 (338)
T d1udca_         157 EQILTDLQKAQPDWSIALLRYFNP-VGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEE-ECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred             hHHHHHHHhhccCCeEEEEeeccE-EeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence            55443     24899999999965 7775321            123344444333 34444443      677889999


Q ss_pred             HHHHHHHHHHhccCc--ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          285 RIVVAEACIQALDIE--FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       285 v~Dva~a~~~~l~~~--~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ++|++.++..+....  ...+++||++++       ...++.|+++.+.+
T Consensus       236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~-------~~~si~e~~~~i~~  278 (338)
T d1udca_         236 VMDLADGHVVAMEKLANKPGVHIYNLGAG-------VGNSVLDVVNAFSK  278 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCS-------SCEEHHHHHHHHHH
T ss_pred             EeehhhhccccccccccccCcceeeecCC-------CCCcHHHHHHHHHH
Confidence            999998877766542  234679999995       77899999998864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=9e-30  Score=227.89  Aligned_cols=236  Identities=18%  Similarity=0.157  Sum_probs=176.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh--hhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~  158 (333)
                      |+|||||||||||++|+++|+++||+|++++|.....  ..+.......+++++.+|++|.+.+. ..+.  ..++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ-RAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHH-HHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhh-hhhccccccccccc
Confidence            6899999999999999999999999999999965332  22221112567999999999998888 5554  56788888


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccC-------CCCCccchhhhHHHHHHHHHH
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGE  229 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k~~~e  229 (333)
                      |+..... .........++.|+.|+.++++++++ +. ++|++.||..+|+.       ++.+..+.+.|+.+|  ..+|
T Consensus        80 a~~~~~~-~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK--~~~E  156 (321)
T d1rpna_          80 AAQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAK--LYGH  156 (321)
T ss_dssp             CSCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH--HHHH
T ss_pred             ccccccc-ccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHH--HHHH
Confidence            8765421 12233345678899999999998854 54 57888888888763       445566778888554  4455


Q ss_pred             HH----HHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          230 DF----VQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       230 ~~----l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                      .+    ..+.+++++++||+.+ |||.....      ...+.+...+......++++++.++|+|++|+|++++.++.++
T Consensus       157 ~~~~~~~~~~~~~~~~lr~~~v-yGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~  235 (321)
T d1rpna_         157 WITVNYRESFGLHASSGILFNH-ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD  235 (321)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHhhcCCcEEEEEEecc-cCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence            44    4567999999999965 88875322      1222333445556667899999999999999999999999886


Q ss_pred             ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          300 FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       300 ~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .  +..||++++       ...++.++++.+.+
T Consensus       236 ~--~~~~ni~~~-------~~~s~~~~~~~~~~  259 (321)
T d1rpna_         236 K--ADDYVVATG-------VTTTVRDMCQIAFE  259 (321)
T ss_dssp             S--CCCEEECCS-------CEEEHHHHHHHHHH
T ss_pred             C--cCCceeccc-------ccceehhhhHHHHH
Confidence            4  467999985       77899999988765

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=2.9e-29  Score=226.83  Aligned_cols=235  Identities=17%  Similarity=0.149  Sum_probs=168.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc----CCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ++|+||||||+||||++|+++|+++|++|++++|+.++...+...    .......++.+|+.|.+.+. +++.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYD-EVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTT-TTTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhh-hhcccchhhh
Confidence            478999999999999999999999999999999987665543211    11334456889999999999 8999999999


Q ss_pred             EcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CC-CCCeEEEEeccccccC--------------------------
Q 019935          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PS-SLKRIVLVSSVGVTKF--------------------------  208 (333)
Q Consensus       157 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~-~~~~~v~~SS~~~~~~--------------------------  208 (333)
                      |+++.....    ......++.|+.|+.++++++ +. ++++||++||+.+...                          
T Consensus        89 ~~a~~~~~~----~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          89 HIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             ECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhccccccc----ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            999876422    223446778999999999977 43 7899999999865321                          


Q ss_pred             -CCCCccchhhhHHHHHHHHHHH----HHHhc--CCCEEEEEcccccCCCCCC-----cchHHHHHHhhcccceeecCCC
Q 019935          209 -NELPWSIMNLFGVLKYKKMGED----FVQKS--GLPFTIIRAGRLTDGPYTS-----YDLNTLLKATAGERRAVLMGQG  276 (333)
Q Consensus       209 -~~~~~~~~~~~~~~k~k~~~e~----~l~~~--gi~~~~vrpg~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~  276 (333)
                       +..+..+...|+.+  |..+|.    +.+++  ++++++++|+.+ +||...     .....+...+..+..... ..+
T Consensus       165 ~e~~~~~p~~~Y~~s--K~~~E~~~~~~~~~~~~~~~~~~i~p~~v-~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~  240 (342)
T d1y1pa1         165 PESDPQKSLWVYAAS--KTEAELAAWKFMDENKPHFTLNAVLPNYT-IGTIFDPETQSGSTSGWMMSLFNGEVSPA-LAL  240 (342)
T ss_dssp             CTTSTTHHHHHHHHH--HHHHHHHHHHHHHHHCCSSEEEEEEESEE-ECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHT
T ss_pred             cccCCCCCcCcccch--hHhHHHHHHHhhhhcccccccceecccce-eCCCCCccccccchHHHHHHHHcCCcCcc-cCC
Confidence             11122334456655  544543    44554  577889999844 677431     224444444444433332 234


Q ss_pred             CcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          277 DKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       277 ~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..++|+|++|+|++++.+++++...++.+ ++++       +..+|+|+++.|++
T Consensus       241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~-~~~~-------~~~t~~eia~~i~k  288 (342)
T d1y1pa1         241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTA-------GTFDWNTVLATFRK  288 (342)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECC-------EEECHHHHHHHHHH
T ss_pred             ccceeeeeHHHHHHHHHHhhcCccccceEE-EEcC-------CceEHHHHHHHHHH
Confidence            566789999999999999999877766655 5553       77999999999865

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=5.3e-30  Score=235.97  Aligned_cols=241  Identities=16%  Similarity=0.163  Sum_probs=171.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----------------hhhh--hccCCCCceEEEEccCCCcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----------------ATTL--FGKQDEETLQVCKGDTRNPK  142 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----------------~~~~--~~~~~~~~~~~v~~D~~d~~  142 (333)
                      ||+|||||||||||++|+++|+++||+|++++.-...                 ...+  .......+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            5799999999999999999999999999999621000                 0000  00001467999999999999


Q ss_pred             CCchhhhc--CCcEEEEcCCCCCCCCCCCC--CCCCCcchhHHHHHHHHHhcCC-CC-CeEEEEeccccccCCCC-----
Q 019935          143 DLDPAIFE--GVTHVICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFNEL-----  211 (333)
Q Consensus       143 ~~~~~~~~--~~d~vi~~a~~~~~~~~~~~--~~~~~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~~~~~~~-----  211 (333)
                      .++ .++.  ++|+|||+|+....+....+  .+...+++|+.|+.+++++++. ++ ++|++.||..+|+....     
T Consensus        81 ~l~-~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~  159 (393)
T d1i24a_          81 FLA-ESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHH-HHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHH-HHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence            999 7887  56999999987542211111  1223578899999999998864 54 56888888887764321     


Q ss_pred             ---------------CccchhhhHHHHHHHHHHH----HHHhcCCCEEEEEcccccCCCCCCc-----------------
Q 019935          212 ---------------PWSIMNLFGVLKYKKMGED----FVQKSGLPFTIIRAGRLTDGPYTSY-----------------  255 (333)
Q Consensus       212 ---------------~~~~~~~~~~~k~k~~~e~----~l~~~gi~~~~vrpg~~~~g~~~~~-----------------  255 (333)
                                     +..+.+.|+.+  |..+|.    +.++.+++++++||+.+ ||+....                 
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~s--K~~aE~~~~~~~~~~~l~~~~lR~~~v-~G~~~~~~~~~~~~~~~~~~~~~~  236 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLS--KVHDSHNIAFTCKAWGIRATDLNQGVV-YGVKTDETEMHEELRNRLDYDAVF  236 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHH--HHHHHHHHHHHHHHHCCEEEEEEECEE-ECSCCTTGGGSGGGCCCCCCSTTT
T ss_pred             cccccccccccccccccccccHHHHH--hhhhcccccccccccceeeeecccccc-cCCCcccccccccccccccccccc
Confidence                           23445667755  444554    44577999999999955 7876421                 


Q ss_pred             --chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          256 --DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                        .+..+......+.++.++|++.+.++|+|++|++++++.+++++...++.+.+.++      .+..++.|+++.+.+
T Consensus       237 ~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~------~~~~si~el~~~i~~  309 (393)
T d1i24a_         237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF------TEQFSVNELASLVTK  309 (393)
T ss_dssp             CCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEEC------SEEEEHHHHHHHHHH
T ss_pred             ccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCC------CCeeEHHHHHHHHHH
Confidence              13455555556677788899999999999999999999999987665654433222      267899999888754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.6e-29  Score=224.58  Aligned_cols=234  Identities=17%  Similarity=0.132  Sum_probs=171.0

Q ss_pred             CeE-EEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-----hhhhhccC---CCCceEEEEccCCCcCCCchhhhc--C
Q 019935           83 KLV-LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--G  151 (333)
Q Consensus        83 ~~v-lVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~--~  151 (333)
                      |+| ||||||||||++|+++|+++||+|++++|..+.     .+.+....   ...+++++.+|++|++.+. .++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV-KIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHH-HHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhH-HHHhhcc
Confidence            467 999999999999999999999999999996532     22221111   1357899999999999998 7765  6


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C---CCeEEEEeccccccC-------CCCCccchhhhH
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S---LKRIVLVSSVGVTKF-------NELPWSIMNLFG  220 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~---~~~~v~~SS~~~~~~-------~~~~~~~~~~~~  220 (333)
                      +++++|+++..... ..+.....++++|+.|+.++++++++ +   .++||++||.++||.       ++.+..|.+.||
T Consensus        80 ~~~v~~~~a~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg  158 (347)
T d1t2aa_          80 PTEIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG  158 (347)
T ss_dssp             CSEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH
T ss_pred             cceeeeeeeccccc-hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHH
Confidence            78999999865321 11223344578999999999998843 3   358999999999974       345566777888


Q ss_pred             HHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          221 VLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       221 ~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .+  |..+|+++    ++.+++++++||+.+ |||+....      ...+.....+......+++++..++++|++|+++
T Consensus       159 ~s--K~~aE~~~~~~~~~~~~~~~ilr~~~v-yGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         159 AA--KLYAYWIVVNFREAYNLFAVNGILFNH-ESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HH--HHHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HH--HHHHHHHHHHHHHHhCCCEEEEEecce-eCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            55  44566554    456999999999965 78864322      2223344445666778899999999999999999


Q ss_pred             HHHHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHH
Q 019935          291 ACIQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAA  330 (333)
Q Consensus       291 a~~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i  330 (333)
                      ++..++++..  .+.+++..+       ...++.+..+.+
T Consensus       236 a~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~  266 (347)
T d1t2aa_         236 AMWLMLQNDE--PEDFVIATG-------EVHSVREFVEKS  266 (347)
T ss_dssp             HHHHHHHSSS--CCCEEECCS-------CCEEHHHHHHHH
T ss_pred             HHHHHhhcCC--Cccceeccc-------cccccchhhhhh
Confidence            9999998854  356777774       567777776654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-28  Score=222.79  Aligned_cols=239  Identities=18%  Similarity=0.183  Sum_probs=169.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc----------hhhhhhccCCCCceEEEEccCCCcCCCchhhhc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----------KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~----------~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~  150 (333)
                      |.|||||||||||||++|+++|+++|++|++++|...          ..+.+. .....++.++++|++|.+.++ +.+.
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~-~~~~   78 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELTGRSVEFEEMDILDQGALQ-RLFK   78 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHH-HHHTCCCEEEECCTTCHHHHH-HHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHH-HhcCCCcEEEEeecccccccc-cccc
Confidence            3478999999999999999999999999999975211          111111 111678999999999999998 6665


Q ss_pred             --CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCC--------Cccchhhh
Q 019935          151 --GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL--------PWSIMNLF  219 (333)
Q Consensus       151 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~--------~~~~~~~~  219 (333)
                        ..++++|+|+..+... ....+...+++|+.|+.+++++++. ++++|+++||..+|+....        ...+.++|
T Consensus        79 ~~~~~~i~h~Aa~~~~~~-~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y  157 (346)
T d1ek6a_          79 KYSFMAVIHFAGLKAVGE-SVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY  157 (346)
T ss_dssp             HCCEEEEEECCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred             ccccccccccccccCcHh-hHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChH
Confidence              4678999999764211 1222345688999999999998854 8999999999999884321        12345567


Q ss_pred             HHHHHHHHHHHHH----Hh-cCCCEEEEEcccccCCCCCCc------------chHHHHHHhhccc-ceeec------CC
Q 019935          220 GVLKYKKMGEDFV----QK-SGLPFTIIRAGRLTDGPYTSY------------DLNTLLKATAGER-RAVLM------GQ  275 (333)
Q Consensus       220 ~~~k~k~~~e~~l----~~-~gi~~~~vrpg~~~~g~~~~~------------~~~~~~~~~~~~~-~~~~~------~~  275 (333)
                      +..  |..+|+.+    +. .+++++++||+.+ ||++...            .+..+...+.+.. .+.++      .+
T Consensus       158 ~~~--k~~~e~~~~~~~~~~~~~~~~~lR~~~v-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~  234 (346)
T d1ek6a_         158 GKS--KFFIEEMIRDLCQADKTWNAVLLRYFNP-TGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTED  234 (346)
T ss_dssp             HHH--HHHHHHHHHHHHHHCTTCEEEEEEECEE-ECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSS
T ss_pred             HHH--HHHHHHHHHHHHHhccCCceEEEeecce-eccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCC
Confidence            754  44455443    33 4899999999955 7875421            1333334333333 33333      34


Q ss_pred             CCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          276 GDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       276 ~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +.+.++|+|++|+|.++..++....  ..+++||++++       ...++.|+++.|.+
T Consensus       235 g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~-------~~~s~~dl~~~i~~  286 (346)
T d1ek6a_         235 GTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-------TGYSVLQMVQAMEK  286 (346)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-------CCEEHHHHHHHHHH
T ss_pred             CCeeEeEEEEEeccchhhhhccccccccCceEEEeCCC-------CcccHHHHHHHHHH
Confidence            6677899999999999988765432  44679999995       77999999999864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.3e-28  Score=221.29  Aligned_cols=238  Identities=19%  Similarity=0.207  Sum_probs=167.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch-hhhh--hccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTL--FGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~-~~~~--~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      |.|||||||||||++|+++|+++|++|+++++.... ....  .......+++++++|++|.+.++ .++.  ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~-~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLE-KVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHH-HHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHH-HHHhccCCCEEEE
Confidence            579999999999999999999999999999863221 1110  01111568899999999999998 6665  7999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-----------CCCCccchhhhHHHHHH
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-----------NELPWSIMNLFGVLKYK  225 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-----------~~~~~~~~~~~~~~k~k  225 (333)
                      +|+..... .....+..+..+|+.|+.+++++++. ++++||++||+.+|+.           ++.+..+.+.|+  .+|
T Consensus        81 lAa~~~~~-~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~--~sK  157 (347)
T d1z45a2          81 FAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG--HTK  157 (347)
T ss_dssp             CCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH--HHH
T ss_pred             cccccccc-ccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhH--hHH
Confidence            99975421 11223345678999999999998865 8999999999999973           233445566777  556


Q ss_pred             HHHHHHHHh------cCCCEEEEEcccccCCCCCC------------cchHHHHHHhhc-ccceeecCCC------Cccc
Q 019935          226 KMGEDFVQK------SGLPFTIIRAGRLTDGPYTS------------YDLNTLLKATAG-ERRAVLMGQG------DKLI  280 (333)
Q Consensus       226 ~~~e~~l~~------~gi~~~~vrpg~~~~g~~~~------------~~~~~~~~~~~~-~~~~~~~~~~------~~~~  280 (333)
                      ..+|+.+..      .+++++++||+.+ ||+...            .....+...+.+ ...+.+++++      ...+
T Consensus       158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v-~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~  236 (347)
T d1z45a2         158 YAIENILNDLYNSDKKSWKFAILRYFNP-IGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR  236 (347)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEE-ECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred             HHHHHHHHHHHHhhccCCcEEEEeecce-EeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence            667765532      4789999999966 554321            112333333333 3334455544      4556


Q ss_pred             ccccHHHHHHHHHHhccCc------ccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          281 GEVSRIVVAEACIQALDIE------FTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       281 ~~i~v~Dva~a~~~~l~~~------~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +++++.|++.+++.++...      ...+++||+++|       ..+++.|+++.+.+
T Consensus       237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~-------~~~s~~e~~~~i~~  287 (347)
T d1z45a2         237 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-------KGSTVFEVYHAFCK  287 (347)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-------CCEEHHHHHHHHHH
T ss_pred             eeeeeecccccccccccccccccccccccccceecCC-------CcccHHHHHHHHHH
Confidence            7888889999888887642      234679999986       67899999998864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=4.4e-28  Score=207.96  Aligned_cols=213  Identities=16%  Similarity=0.163  Sum_probs=161.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      .+++|++|||||+++||+++++.|+++|++|++.+|++++.+.+.++. ..++.++.+|++|+++++ ++       +.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   80 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDVTQPAQWK-AAVDTAVTAFGG   80 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hCcceEEEeecCCHHHHH-HHHHHHHHHhCC
Confidence            578899999999999999999999999999999999998887776554 467888999999999887 43       457


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|++|||||......   .+.++....+++|+.+++++++++     +++-++||++||.....    +......|+.+|
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~asK  156 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----GTVACHGYTATK  156 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc----ccccccchhhHH
Confidence            999999999865211   122233447889999999999855     22457999999998865    445556677666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      +     .+.+..++.++||+++.|.||.+ ..+.....          .+.    -...+...+..++|+|+++++++++
T Consensus       157 aal~~ltk~lA~el~~~gIrVN~I~PG~i-~T~~~~~~----------~~~----~~~~pl~R~~~p~diA~~v~fL~s~  221 (244)
T d1nffa_         157 FAVRGLTKSTALELGPSGIRVNSIHPGLV-KTPMTDWV----------PED----IFQTALGRAAEPVEVSNLVVYLASD  221 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCB-CSGGGTTS----------CTT----CSCCSSSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEeeCCc-cChhHhhh----------hHH----HHhccccCCCCHHHHHHHHHHHhCh
Confidence            4     45666777889999999999954 54432210          000    0113445689999999999999987


Q ss_pred             cc--cCCcEEEecCCC
Q 019935          299 EF--TEGEIYEINSVE  312 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~  312 (333)
                      ..  ..|+++.++||-
T Consensus       222 ~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         222 ESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             hhCCCcCCEEEECCCe
Confidence            54  459999999873

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=1.5e-27  Score=214.81  Aligned_cols=238  Identities=13%  Similarity=0.122  Sum_probs=170.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-----hhhhhhc---cCCCCceEEEEccCCCcCCCchhhhc--CC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~~~~~~---~~~~~~~~~v~~D~~d~~~~~~~~~~--~~  152 (333)
                      |++||||||||||+||+++|+++||+|++++|..+     +...+..   ......++++.+|+++.+.+. ..++  ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~-~~~~~~~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR-RWIDVIKP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHH-HHHHHHCC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHH-HHHhhhcc
Confidence            78999999999999999999999999999999543     2222211   112456789999999999888 6664  68


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC------CCCeEEEEeccccccC------CCCCccchhhhH
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTKF------NELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~------~~~~~v~~SS~~~~~~------~~~~~~~~~~~~  220 (333)
                      |+|||+|+...... ..+.+...++.|+.++.+++++++.      ...++++.||..+++.      ++.+..+.+.|+
T Consensus        81 D~Vih~Aa~~~~~~-~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~  159 (339)
T d1n7ha_          81 DEVYNLAAQSHVAV-SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA  159 (339)
T ss_dssp             SEEEECCSCCCHHH-HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred             chhhhccccccccc-cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhh
Confidence            99999998754211 1123344678899999999997742      3457888888877663      445667788898


Q ss_pred             HHHHH--HHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHH----HHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKYK--KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNT----LLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|..  ..+..+.+.++++++++||+.+ |||+....  ...    +.....+.......+++.+.++++|++|+|+++
T Consensus       160 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~v-yGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~  238 (339)
T d1n7ha_         160 ASKCAAHWYTVNYREAYGLFACNGILFNH-ESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM  238 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCE-ECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEEccc-cCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHH
Confidence            76543  2333445667999999999965 88875432  111    222333455566778899999999999999999


Q ss_pred             HHhccCcccCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          293 IQALDIEFTEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       293 ~~~l~~~~~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..+++++..  ..+++..+       ...++.++++.+.+
T Consensus       239 ~~~~~~~~~--~~~~~~~~-------~~~s~~~~~~~~~~  269 (339)
T d1n7ha_         239 WLMLQQEKP--DDYVVATE-------EGHTVEEFLDVSFG  269 (339)
T ss_dssp             HHHHTSSSC--CEEEECCS-------CEEEHHHHHHHHHH
T ss_pred             HHHHhcCCC--Cccccccc-------cccccchhhhhhhh
Confidence            999998753  34555553       66788888887653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-28  Score=208.53  Aligned_cols=207  Identities=19%  Similarity=0.195  Sum_probs=154.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +++++|||||||||||++|+++|+++|.  +|++++|++.+.....    ...+....+|+.+.+++. ..+.++|+|||
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~-~~~~~~d~vi~   86 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYA-SAFQGHDVGFC   86 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGG-GGGSSCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeeccccccccc-ccccccccccc
Confidence            3567999999999999999999999984  8999999875543322    457788889999999998 89999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcC
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~g  236 (333)
                      ++|....    ......+.++|+.++.+++++++ .++++||++||.+++....      +.|  .+.|..+|+++.+.+
T Consensus        87 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~------~~Y--~~~K~~~E~~l~~~~  154 (232)
T d2bkaa1          87 CLGTTRG----KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN------FLY--LQVKGEVEAKVEELK  154 (232)
T ss_dssp             CCCCCHH----HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS------SHH--HHHHHHHHHHHHTTC
T ss_pred             ccccccc----ccchhhhhhhcccccceeeecccccCccccccCCccccccCcc------chh--HHHHHHhhhcccccc
Confidence            9986421    11223467889999999999874 4899999999999865322      334  477888999999999


Q ss_pred             CC-EEEEEcccccCCCCCCcchHH-HHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecC
Q 019935          237 LP-FTIIRAGRLTDGPYTSYDLNT-LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINS  310 (333)
Q Consensus       237 i~-~~~vrpg~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~  310 (333)
                      ++ ++++||| +++|+........ +.....     ..++........|+++|+|+++++++.++.. ++.+.+.+
T Consensus       155 ~~~~~IlRP~-~i~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~-~~~~i~~~  223 (232)
T d2bkaa1         155 FDRYSVFRPG-VLLCDRQESRPGEWLVRKFF-----GSLPDSWASGHSVPVVTVVRAMLNNVVRPRD-KQMELLEN  223 (232)
T ss_dssp             CSEEEEEECC-EEECTTGGGSHHHHHHHHHH-----CSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC-SSEEEEEH
T ss_pred             ccceEEecCc-eeecCCCcCcHHHHHHHHHh-----hccCCcccCCCeEEHHHHHHHHHHHHhcCcc-CCeEEEcH
Confidence            86 9999999 5578765433222 112111     1223333445679999999999999988754 45666654

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=5.6e-28  Score=208.55  Aligned_cols=220  Identities=13%  Similarity=0.082  Sum_probs=162.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      .+.+++|++|||||+++||+++++.|+++|++|++++|+.++.++..+++.  +.++..+.+|++|+++++ ++      
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~-~~~~~~~~   83 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEIS-EVINKILT   83 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHH
Confidence            466789999999999999999999999999999999999887766543322  457889999999999887 44      


Q ss_pred             -hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                       +.++|++|||||......   ...++....+++|+.+++++++++     +++.++||++||..+..    +......|
T Consensus        84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----~~~~~~~Y  159 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----GNVGQANY  159 (251)
T ss_dssp             HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHH
T ss_pred             hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC----CCCCCHHH
Confidence             358999999999765321   112233446788999999999865     23567999999998865    44455667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|+     .+.+..++.++||++++|.||.+ ..+......+.+.....         ...+...+..++|+|+++++
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v-~T~~~~~~~~~~~~~~~---------~~~pl~R~~~pedvA~~v~f  229 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFI-SSDMTDKISEQIKKNII---------SNIPAGRMGTPEEVANLACF  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CC-----CCHHHHHHHH---------TTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCE-ecccccccCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHH
Confidence            76663     46666778889999999999955 66554332333322221         12344578899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+++.++||
T Consensus       230 L~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         230 LSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhCCCcCcEEEECCC
Confidence            998765  45999999987

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.95  E-value=5.9e-28  Score=217.01  Aligned_cols=242  Identities=17%  Similarity=0.179  Sum_probs=169.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC--cchhhhhhccCCCCceEEEEccCCCcCCCchhhhcC--CcEEEEcC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVICCT  159 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~--~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~--~d~vi~~a  159 (333)
                      |||||||+||||++|+++|+++|++|+++++-  ......+.......+++++.+|++|.+.+. +++++  +|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~-~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVT-RLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHH-HHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHH-HHHHhcCCceEEeec
Confidence            79999999999999999999999999998752  122222211112568999999999999998 77764  59999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccC-C-----------------------CCCcc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF-N-----------------------ELPWS  214 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~-~-----------------------~~~~~  214 (333)
                      +...... ....+...+++|+.|+.+|+++++. +++++|+.||..++.. .                       ..+..
T Consensus        81 a~~~~~~-~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (338)
T d1orra_          81 GQVAMTT-SIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  159 (338)
T ss_dssp             CCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             ccccccc-cccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence            8764211 1123355788999999999998854 7776666666554331 1                       11223


Q ss_pred             chhhhHHHHHH--HHHHHHHHhcCCCEEEEEcccccCCCCCCcc----hHHHHHHhh-----cccceeecCCCCcccccc
Q 019935          215 IMNLFGVLKYK--KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD----LNTLLKATA-----GERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       215 ~~~~~~~~k~k--~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~----~~~~~~~~~-----~~~~~~~~~~~~~~~~~i  283 (333)
                      +.+.|+..+..  ..+....+..++...++++..++++......    ...+.....     ......+++++...++|+
T Consensus       160 ~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~  239 (338)
T d1orra_         160 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  239 (338)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             cccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeee
Confidence            45666655432  2233445667999999999866544432211    233332221     245567889999999999


Q ss_pred             cHHHHHHHHHHhccCcc-cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          284 SRIVVAEACIQALDIEF-TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~-~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      |++|++++++.+++.+. ..++++++.++.+     ...++.|+++.+.+
T Consensus       240 ~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~-----~~~s~~e~~~~i~~  284 (338)
T d1orra_         240 HAEDMISLYFTALANVSKIRGNAFNIGGTIV-----NSLSLLELFKLLED  284 (338)
T ss_dssp             EHHHHHHHHHHHHHTHHHHTTCEEEESSCGG-----GEEEHHHHHHHHHH
T ss_pred             cccchhhHHHHHHhccccccCcccccccccc-----ccccHHHHHHHHHH
Confidence            99999999999998754 5588999977543     67899999988764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.1e-28  Score=210.21  Aligned_cols=217  Identities=17%  Similarity=0.102  Sum_probs=162.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      ++++|+++||||+++||+++++.|+++|++|++++|++++.+++.+.. ..++..+.+|++|+++++ ++       +.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-GANGKGLMLNVTDPASIE-SVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCTTCHHHHH-HHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCCcEEEEEecCHHHhh-hhhhhhhcccCC
Confidence            467899999999999999999999999999999999998887765544 457888999999998887 43       347


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|++|||||......   ...++....+++|+.+++++++++     +++-++||++||..+..    +......|+.+|
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----~~~~~~~Y~asK  154 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM----GNGGQANYAAAK  154 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHHHHH
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC----CCCCCHHHHHHH
Confidence            999999999865321   122333446889999999999966     23557999999998865    444556677666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      +     .+.+..++.++||++++|+||.+ ..+......+.....         +....+...+..++|+|+++++++++
T Consensus       155 aal~~lt~~lA~ela~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~---------~~~~~pl~R~~~pedvA~~v~fL~S~  224 (243)
T d1q7ba_         155 AGLIGFSKSLAREVASRGITVNVVAPGFI-ETDMTRALSDDQRAG---------ILAQVPAGRLGGAQEIANAVAFLASD  224 (243)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHTSCHHHHHH---------HHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecceE-echhhhhhhhhHHHH---------HHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            4     45666777889999999999955 443221111111111         11223455788999999999999987


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+++.++||
T Consensus       225 ~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         225 EAAYITGETLHVNGG  239 (243)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCcCCeEEECCC
Confidence            55  45999999997

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.95  E-value=7.8e-28  Score=220.63  Aligned_cols=239  Identities=20%  Similarity=0.190  Sum_probs=167.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEcCc---------chhhh----h------hccCCCCceEEEEccCCCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDP---------EKATT----L------FGKQDEETLQVCKGDTRNP  141 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~---------~~~~~----~------~~~~~~~~~~~v~~D~~d~  141 (333)
                      .|+||||||+||||++|+++|++ .|++|+++++-.         +..+.    +      ........+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46899999999999999999996 689999997411         00000    0      0011145688999999999


Q ss_pred             CCCchhhhc---CCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCC--------
Q 019935          142 KDLDPAIFE---GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN--------  209 (333)
Q Consensus       142 ~~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~--------  209 (333)
                      +.++ +++.   ++|+|||+|+...... .........++|+.++.+++++++. ++++++++||..+++..        
T Consensus        82 ~~l~-~~~~~~~~~d~ViH~Aa~~~~~~-~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  159 (383)
T d1gy8a_          82 DFLN-GVFTRHGPIDAVVHMCAFLAVGE-SVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN  159 (383)
T ss_dssp             HHHH-HHHHHSCCCCEEEECCCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHhh-hhhhccceeehhhcccccccccc-cccccccccccccccccccchhhhccCCccccccccccccccccccccccc
Confidence            9888 6664   6899999999754211 1122234678899999999998854 88999999999887632        


Q ss_pred             ------CCCccchhhhHHHHHHHHHHHHH----HhcCCCEEEEEcccccCCCCCCcc-----------hHHHHHHhh---
Q 019935          210 ------ELPWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD-----------LNTLLKATA---  265 (333)
Q Consensus       210 ------~~~~~~~~~~~~~k~k~~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~-----------~~~~~~~~~---  265 (333)
                            +.+..+.+.|+.+|  ...|.++    +.+|++++++||+.+ |||+....           .+.++..+.   
T Consensus       160 ~~~~~e~~~~~p~~~Y~~sK--~~~e~~~~~~~~~~gl~~~~lR~~~v-yG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         160 AEPIDINAKKSPESPYGESK--LIAERMIRDCAEAYGIKGICLRYFNA-CGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             CCCBCTTSCCBCSSHHHHHH--HHHHHHHHHHHHHHCCEEEEEEECEE-ECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             ccccccccCCCCCCHHHhhH--hHHHHHHHHHHHHhCCCEEEEeccee-eccCccccccccccccchhHHHHHHHHHhhc
Confidence                  23445677788554  4444444    557999999999965 88876422           112221111   


Q ss_pred             -------------cccceeec------CCCCcccccccHHHHHHHHHHhccCc--------ccCCcEEEecCCCCCCCCC
Q 019935          266 -------------GERRAVLM------GQGDKLIGEVSRIVVAEACIQALDIE--------FTEGEIYEINSVEGEGPGS  318 (333)
Q Consensus       266 -------------~~~~~~~~------~~~~~~~~~i~v~Dva~a~~~~l~~~--------~~~g~~~~v~~g~~~~~~~  318 (333)
                                   ......++      ++|.+.++|+|++|+|++++.+++..        ...+++||+++|       
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~-------  309 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS-------  309 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS-------
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC-------
Confidence                         11222233      34677889999999999999998642        234679999986       


Q ss_pred             CcccHHHHHHHHhc
Q 019935          319 DPQKWRELFKAAKA  332 (333)
Q Consensus       319 ~~~s~~e~~~~i~~  332 (333)
                      ..+++.|+++.+.+
T Consensus       310 ~~~s~~el~~~i~~  323 (383)
T d1gy8a_         310 RGYSVREVIEVARK  323 (383)
T ss_dssp             CCEEHHHHHHHHHH
T ss_pred             CceeHHHHHHHHHH
Confidence            66899999998875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.95  E-value=8.8e-28  Score=207.30  Aligned_cols=220  Identities=14%  Similarity=0.129  Sum_probs=157.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCch------hhhcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDP------AIFEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~------~~~~~  151 (333)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+... ..++.++.+|++|++++++      +.+.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4788999999999999999999999999999999999887766544332 4578999999999998872      23458


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCC-CeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|++|||||......   .+.++....+++|+.+++++++++     +++. ++||++||..+..    +.+....|+.+
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----~~~~~~~Y~as  158 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----GDPSLGAYNAS  158 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----cCCCchhHHHH
Confidence            999999999864211   111223347789999999999865     2343 4899999998865    44555678777


Q ss_pred             HHH-----HH--HHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KYK-----KM--GEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~k-----~~--~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |..     +.  .|..+.++||+++.|.||.+ ..+....        ....+.....-...+...+..++|+|++++++
T Consensus       159 Kaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i-~T~~~~~--------~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL  229 (251)
T d1zk4a1         159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDD--------LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCB-CCHHHHT--------STTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHhcchHHHHHHHhcCCCcEEEEEEeCCCC-CChhHHh--------cCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence            742     22  22335678999999999955 4332111        11011111111223455788999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|+++.++||
T Consensus       230 ~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         230 ASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhCCCcCcEEEECcc
Confidence            98755  45999999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=3.1e-27  Score=202.68  Aligned_cols=215  Identities=13%  Similarity=0.053  Sum_probs=159.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      .+++|++|||||+++||+++++.|+++|++|++++|++++.++..+   ..+++.+.+|++|+++++ ++       +.+
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---AVGAHPVVMDVADPASVE-RGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TTTCEEEECCTTCHHHHH-HHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCeEEEEecCCHHHHH-HHHHHHHHhcCC
Confidence            4688999999999999999999999999999999999988877665   346788999999999887 43       347


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|++|||||......   ...++....+++|+.+++++++++    + .+..+++++||.+..+     ......|+.+|
T Consensus        78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~-----~~~~~~Y~asK  152 (242)
T d1ulsa_          78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----NLGQANYAASM  152 (242)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----CTTCHHHHHHH
T ss_pred             ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC-----CCCCcchHHHH
Confidence            999999999864211   122233457889999999999865    2 3456777777765443     33445676666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                      .     .+.+..++..+||+++.|.||.+ ..+......+........         ..+...+..++|+|+++++++++
T Consensus       153 aal~~ltk~lA~ela~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~---------~~pl~R~~~pedia~~v~fL~S~  222 (242)
T d1ulsa_         153 AGVVGLTRTLALELGRWGIRVNTLAPGFI-ETRMTAKVPEKVREKAIA---------ATPLGRAGKPLEVAYAALFLLSD  222 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCTTTSSSCHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCcc-cChhhhcCCHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhch
Confidence            4     45666777888999999999954 666544332322222211         23445688999999999999987


Q ss_pred             cc--cCCcEEEecCCC
Q 019935          299 EF--TEGEIYEINSVE  312 (333)
Q Consensus       299 ~~--~~g~~~~v~~g~  312 (333)
                      ..  ..|+++.++||-
T Consensus       223 ~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         223 ESSFITGQVLFVDGGR  238 (242)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             hhCCCCCcEEEECCCc
Confidence            55  459999999973

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.95  E-value=5.4e-28  Score=209.35  Aligned_cols=226  Identities=10%  Similarity=0.091  Sum_probs=163.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.++.+++.++. +.++..+.+|++|+++++ ++       +.+
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~-~~~~~~~~~~g~   79 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-GPAACAIALDVTDQASID-RCVAELLDRWGS   79 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEeeCCCHHHHH-HHHHHHHHHhCC
Confidence            478899999999999999999999999999999999998887766554 567889999999999888 44       358


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CC-CCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      +|++|||||......   ...++....+++|+.+++++++++     ++ ..++||++||.++..    +......|+.+
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~as  155 (256)
T d1k2wa_          80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR----GEALVGVYCAT  155 (256)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc----ccccccchhhh
Confidence            999999999765221   112223446888999999999854     22 346999999998865    44555667666


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh--cccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA--GERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |.     .+.+..++.++||++++|.|| ++.++........+.....  .......+....+...+..++|+|++++++
T Consensus       156 Kaal~~lt~~lA~el~~~gIrVN~V~PG-~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL  234 (256)
T d1k2wa_         156 KAAVISLTQSAGLNLIRHGINVNAIAPG-VVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC-CBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHhcccCeEEEEEecC-CCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            63     456667778899999999999 4465542211111111000  000001111223456789999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|+++.++||
T Consensus       235 ~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         235 ATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             hCchhCCccCceEEECcc
Confidence            98755  45999999997

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=9.9e-28  Score=205.78  Aligned_cols=216  Identities=13%  Similarity=0.025  Sum_probs=159.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~v  155 (333)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++.+++.++  ..++..+.+|++|+++++ +++   .++|++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~--~~~~~~~~~Dv~~~~~v~-~~~~~~g~iDil   78 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE--CPGIEPVCVDLGDWDATE-KALGGIGPVDLL   78 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--STTCEEEECCTTCHHHHH-HHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--cCCCeEEEEeCCCHHHHH-HHHHHcCCCeEE
Confidence            57899999999999999999999999999999999999888776654  346888999999999887 554   478999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C-----CCCCeEEEEeccccccCCCCCccchhhhHHHHH--
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~--  224 (333)
                      |||||......   ...+..+..+++|+.+++++++++ +     ...+++|++||.....    +.+....|+.+|.  
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~asKaal  154 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----TFPNLITYSSTKGAM  154 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHH
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----cCCccccccchHHHH
Confidence            99999764211   112223346788999999999854 2     2346999999998765    4455566776664  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 ---KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 ---k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                         .+.+..++..+||++++|.||.+ ..+.....  .+.+...         +....+...+..++|+|+++++++.+.
T Consensus       155 ~~lt~~lA~e~~~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~~---------~~~~~pl~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         155 TMLTKAMAMELGPHKIRVNSVNPTVV-LTDMGKKVSADPEFARK---------LKERHPLRKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCB-TTHHHHHHTCCHHHHHH---------HHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhCccCeecccCCCCCc-cCHHHHhhcCCHHHHHH---------HHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence               45666777889999999999955 43321100  0111111         111234557889999999999999875


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+++.++||
T Consensus       225 s~~itG~~i~vDGG  238 (242)
T d1cyda_         225 SASTSGGGILVDAG  238 (242)
T ss_dssp             GTTCCSSEEEESTT
T ss_pred             hcCcCCceEEeCcc
Confidence            4  45999999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.4e-27  Score=205.50  Aligned_cols=220  Identities=15%  Similarity=0.027  Sum_probs=156.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+++..+...    ..+..++++|++|++++++      +.+.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE----AIGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH----HHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            367899999999999999999999999999999999876544332    2345778999999988772      224589


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |++|||||......   .+.++.+..+++|+.+++++++++     +++-++||++||..++.    +......|+.+|+
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~asKa  153 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----AEQENAAYNASKG  153 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----BCTTBHHHHHHHH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----cccccchhHHHHH
Confidence            99999999764211   112223346789999999999966     33567999999999865    4555667776664


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                           .+.+..++..+||++++|.||.+ ..+.    +.......... .....+.+..+...+..++|+|+++++++++
T Consensus       154 al~~ltk~lA~el~~~gIrVN~I~PG~v-~T~~----~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~  228 (248)
T d2d1ya1         154 GLVNLTRSLALDLAPLRIRVNAVAPGAI-ATEA----VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASE  228 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHH----HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCC-CCch----HHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence                 45566777889999999999955 3321    11110000000 0011122234456788999999999999987


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+++.++||
T Consensus       229 ~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         229 KASFITGAILPVDGG  243 (248)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCCCCcEEEcCcC
Confidence            55  45999999997

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.94  E-value=1.6e-27  Score=205.25  Aligned_cols=219  Identities=12%  Similarity=0.116  Sum_probs=154.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhccCCCCceEEEEccCCCcCCCchhh-------hc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      ++++|++|||||+++||+++++.|+++|++|++.+|++.+. +...+.. +.++..+.+|++|+++++ ++       +.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~-~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVE-AFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHH-HHHHHHHHHcC
Confidence            46889999999999999999999999999999999986543 2222222 567899999999999887 43       45


Q ss_pred             CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|++|||||......   .+.+.....+++|+.+++++++++     +++-++||++||..+..    +......|+.+
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~as  155 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----KIEAYTHYIST  155 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----CCSSCHHHHHH
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc----cCcccccchhh
Confidence            8999999999865221   122334457889999999999965     23567999999998865    44455667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |.     .+.+..++..+||++++|.||.+ ..+........       ...........+...+..++|+|++++++++
T Consensus       156 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i-~T~~~~~~~~~-------~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S  227 (247)
T d2ew8a1         156 KAANIGFTRALASDLGKDGITVNAIAPSLV-RTATTEASALS-------AMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------------CTTSSSCSCCCTHHHHHHHHHHTS
T ss_pred             hccHHHHHHHHHHHhcccCeEEEEEeeCCC-CCccccccccc-------hhHHHHHHHhccCCCCCCHHHHHHHHHHHhC
Confidence            64     46666777889999999999954 54432211100       0000011111234468899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      +..  ..|+++.++||
T Consensus       228 ~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         228 DDASFITGQTLAVDGG  243 (247)
T ss_dssp             GGGTTCCSCEEEESSS
T ss_pred             chhcCCcCCeEEECCC
Confidence            755  45999999997

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=5.1e-28  Score=209.21  Aligned_cols=221  Identities=10%  Similarity=0.056  Sum_probs=161.1

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hhh
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AIF  149 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~~  149 (333)
                      +.+++|++|||||+++||+++++.|+++|++|++.+|+.++.+++.+++.  +.++.++.+|++|++++++      +.+
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999887766543322  5678899999999988772      224


Q ss_pred             cCCcEEEEcCCCCCCCCC--CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          150 EGVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      .++|++|||||.......  ..++....+++|+.+++++++++     +.+-++||++||..+..    +......|+.+
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~----~~~~~~~Y~as  162 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASS  162 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc----cccccccchhH
Confidence            589999999997652211  11223346788999999999855     23556899999998865    44555667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc-hHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD-LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      |.     .+.+..++.++||++++|.||.+ ..+..... .+.......         ...+...+..++|+|+++++++
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~e~~~~~~---------~~~pl~R~g~pedvA~~v~fL~  232 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAI-LTDALKSVITPEIEQKML---------QHTPIRRLGQPQDIANAALFLC  232 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSB-CSHHHHTTCCHHHHHHHH---------HTCSSCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcC-cChHhhccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHh
Confidence            64     45666777889999999999955 43321110 111111111         1234457889999999999999


Q ss_pred             cCcc--cCCcEEEecCCC
Q 019935          297 DIEF--TEGEIYEINSVE  312 (333)
Q Consensus       297 ~~~~--~~g~~~~v~~g~  312 (333)
                      ++..  ..|+++.++||.
T Consensus       233 S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         233 SPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SGGGTTCCSCEEEESTTS
T ss_pred             CchhcCCcCCEEEECcCc
Confidence            8755  459999999974

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.94  E-value=2.3e-27  Score=204.65  Aligned_cols=219  Identities=13%  Similarity=0.089  Sum_probs=160.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      ++++|++|||||+++||++++++|+++|++|++.+|+.++.++..++. ..++.++.+|++|+++++ ++       +.+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQ-RVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEcccCCHHHHH-HHHHHHHHHcCC
Confidence            478999999999999999999999999999999999998887766554 567899999999999887 43       458


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|++|||||......   ...++....+++|+.+++++++++     +++-++||++||.....    +......|+.+|
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----~~~~~~~Y~asK  155 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----GLALTSSYGASK  155 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHHHH
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----cccchhhHHHHH
Confidence            999999999865221   112233347889999999999965     23567999999998865    445556777666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccc-cHHHHHHHHHHhcc
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEV-SRIVVAEACIQALD  297 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~Dva~a~~~~l~  297 (333)
                      .     .+.+..++.++||++++|.||.+ ..+.       +..... . .........+...+. .++|+|++++++++
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~v-~T~~-------~~~~~~-~-~~~~~~~~~pl~R~g~~PedvA~~v~fL~S  225 (254)
T d1hdca_         156 WGVRGLSKLAAVELGTDRIRVNSVHPGMT-YTPM-------TAETGI-R-QGEGNYPNTPMGRVGNEPGEIAGAVVKLLS  225 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHH-------HHHHTC-C-CSTTSCTTSTTSSCB-CHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEeeeCcc-cCcc-------chhcCH-H-HHHHHHhCCCCCCCCCCHHHHHHHHHHHhc
Confidence            4     45566777888999999999955 3221       111111 1 111111122333454 68999999999998


Q ss_pred             Ccc--cCCcEEEecCCCC
Q 019935          298 IEF--TEGEIYEINSVEG  313 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g~~  313 (333)
                      +..  ..|+++.++||-.
T Consensus       226 ~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         226 DTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GGGTTCCSCEEEESTTTT
T ss_pred             hhhCCCCCceEEeCCCcc
Confidence            755  4599999999743

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=9.2e-28  Score=213.06  Aligned_cols=229  Identities=14%  Similarity=0.115  Sum_probs=167.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh----hhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+||||||||||||++|+++|+++|++|++++|+......    ........+++++.+|+.|.+.+. +.+.+++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~-~~~~~~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLV-DALKQVDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHH-HHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhh-hhccCcchhhh
Confidence            4579999999999999999999999999999997643211    111111567999999999999998 89999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEeccccccCCC-CCccchhhhHHHHHHHHHHHHHHhc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE-LPWSIMNLFGVLKYKKMGEDFVQKS  235 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~~~~~~-~~~~~~~~~~~~k~k~~~e~~l~~~  235 (333)
                      +++..            ....|..+..++++++ +.+..++++.||.+++.... .+..+...  +...+..++++.+..
T Consensus        82 ~~~~~------------~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  147 (312)
T d1qyda_          82 ALAGG------------VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSI--TFIDKRKVRRAIEAA  147 (312)
T ss_dssp             CCCCS------------SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTH--HHHHHHHHHHHHHHT
T ss_pred             hhhhc------------ccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhh--hhHHHHHHHHhhccc
Confidence            99753            2344566677888866 44667778888877765322 22233333  346678888999999


Q ss_pred             CCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCCCC
Q 019935          236 GLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEG  315 (333)
Q Consensus       236 gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~~~  315 (333)
                      +++++++||+.+ +|+........+............+++++..++|++++|+|++++.++.++...++.++..++    
T Consensus       148 ~~~~~i~r~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~----  222 (312)
T d1qyda_         148 SIPYTYVSSNMF-AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPP----  222 (312)
T ss_dssp             TCCBCEEECCEE-HHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCG----
T ss_pred             ccceEEecccee-ecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCC----
Confidence            999999999965 554332211111122223556667888999999999999999999999998776776554442    


Q ss_pred             CCCCcccHHHHHHHHhc
Q 019935          316 PGSDPQKWRELFKAAKA  332 (333)
Q Consensus       316 ~~~~~~s~~e~~~~i~~  332 (333)
                        .+.+|++|+++.+++
T Consensus       223 --~~~~s~~e~~~~~~~  237 (312)
T d1qyda_         223 --MNILSQKEVIQIWER  237 (312)
T ss_dssp             --GGEEEHHHHHHHHHH
T ss_pred             --CcCCCHHHHHHHHHH
Confidence              367899999998865

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.94  E-value=6.5e-28  Score=209.11  Aligned_cols=225  Identities=13%  Similarity=0.076  Sum_probs=160.7

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      .+++++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+++.  +.++.++.+|++|+++++ ++      
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~-~~~~~~~~   81 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQ-ELMNTVAN   81 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHH-HHHHHHHH
Confidence            467899999999999999999999999999999999999888766544332  556788999999998877 33      


Q ss_pred             -hc-CCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          149 -FE-GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       149 -~~-~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                       +. .+|++|||||......   ...++....+++|+.+++++++++     +.+-++||++||.....    +.+....
T Consensus        82 ~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~  157 (259)
T d2ae2a_          82 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----AVPYEAV  157 (259)
T ss_dssp             HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----CCTTCHH
T ss_pred             HhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----ccccccc
Confidence             33 5899999999865221   112233347889999999999865     23557999999998865    4445566


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      |+.+|.     .+.+..++.++||++++|.||.+ ..+..........    ..+....+-...+...+..++|+|++++
T Consensus       158 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~----~~~~~~~~~~~~pl~R~g~pedvA~~v~  232 (259)
T d2ae2a_         158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVI-ATSLVEMTIQDPE----QKENLNKLIDRCALRRMGEPKELAAMVA  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB-CSHHHHHHTTSHH----HHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcc-cCHHHHhhhhchh----hHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            776663     45666777788999999999955 4332110000000    0000000111234557889999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++..  ..|+++.++||
T Consensus       233 fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         233 FLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCcEEEECCC
Confidence            9998755  45999999987

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=2.1e-26  Score=196.83  Aligned_cols=231  Identities=27%  Similarity=0.418  Sum_probs=163.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCe--EEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      +++|||||||||||+++++.|+++|++  |+++.|++++...+     ..+++++.+|+.|.+.+. ++++++|+|||++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-----~~~~~~~~~d~~~~~~~~-~~~~~~d~vi~~a   76 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSIN-PAFQGIDALVILT   76 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHH-HHHTTCSEEEECC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-----cCCcEEEEeeeccccccc-cccccceeeEEEE
Confidence            579999999999999999999999965  66678888776654     457889999999999999 8999999999999


Q ss_pred             CCCCCCCC------------CCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHH
Q 019935          160 GTTAFPSR------------RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (333)
Q Consensus       160 ~~~~~~~~------------~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~  226 (333)
                      +.......            ..........+|+.++.+++..+.. ..+++.+.|+...+.... +........+...+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~  155 (252)
T d2q46a1          77 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKR  155 (252)
T ss_dssp             CCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC-GGGGGGGCCHHHHHH
T ss_pred             eeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc-ccccccccchhhhhh
Confidence            87541110            1122334456788999999997754 778999999888765322 222222223445566


Q ss_pred             HHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEE
Q 019935          227 MGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIY  306 (333)
Q Consensus       227 ~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~  306 (333)
                      ..+.+..+.|++++++||+.+ +|+..... .    .......    .......+|+|++|+|++++.+++++...|++|
T Consensus       156 ~~~~~~~~~~~~~~ilRp~~v-~g~~~~~~-~----~~~~~~~----~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~  225 (252)
T d2q46a1         156 KAEQYLADSGTPYTIIRAGGL-LDKEGGVR-E----LLVGKDD----ELLQTDTKTVPRADVAEVCIQALLFEEAKNKAF  225 (252)
T ss_dssp             HHHHHHHHSSSCEEEEEECEE-ECSCTTSS-C----EEEESTT----GGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEE
T ss_pred             hhhhhhhcccccceeecceEE-ECCCcchh-h----hhhccCc----ccccCCCCeEEHHHHHHHHHHHhCCccccCcEE
Confidence            777888899999999999966 66654311 0    0000000    011334579999999999999999988889999


Q ss_pred             EecCCCCCCCCCCcccHHHHHHHH
Q 019935          307 EINSVEGEGPGSDPQKWRELFKAA  330 (333)
Q Consensus       307 ~v~~g~~~~~~~~~~s~~e~~~~i  330 (333)
                      |++++...+. .....|.+++..+
T Consensus       226 ~i~~~~~~~~-~~~~~~~~lf~~i  248 (252)
T d2q46a1         226 DLGSKPEGTS-TPTKDFKALFSQV  248 (252)
T ss_dssp             EEEECCTTTS-CCCCCHHHHHTTC
T ss_pred             EEeeCCCCCC-hhHHHHHHHHHHH
Confidence            9987533222 2344566665443

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.8e-27  Score=203.31  Aligned_cols=216  Identities=13%  Similarity=0.041  Sum_probs=159.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh---cCCcEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHV  155 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~---~~~d~v  155 (333)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++.+++.++  ..++..+.+|++|+++++ +++   +++|++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~--~~~~~~~~~Dv~d~~~v~-~~~~~~g~iDil   80 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--CPGIEPVCVDLGDWEATE-RALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--STTCEEEECCTTCHHHHH-HHHTTCCCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh--cCCCeEEEEeCCCHHHHH-HHHHHhCCceEE
Confidence            46899999999999999999999999999999999999888777655  346788999999998887 554   478999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C-----CCCCeEEEEeccccccCCCCCccchhhhHHHHH--
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~--  224 (333)
                      |||||......   .+.++....+++|+.+++++++++ +     .+.++||++||.....    +.+....|+.+|+  
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----~~~~~~~Y~asKaal  156 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----AVTNHSVYCSTKGAL  156 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHH
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----cccchhhhhhhHHHH
Confidence            99999865211   112233346788999999998854 2     2457999999998865    4455566776664  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          225 ---KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       225 ---k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                         .+.+..++..+||+++.|.||.+ ..+......  .......         -+..+...+..++|+|+++++++++.
T Consensus       157 ~~lt~~lA~el~~~gIrvN~I~PG~v-~T~~~~~~~~~~~~~~~~---------~~~~pl~R~~~peevA~~v~fL~S~~  226 (244)
T d1pr9a_         157 DMLTKVMALELGPHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTM---------LNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCB-CSHHHHTTSCSHHHHHHH---------HTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeeCcC-cChHHhhhccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHhCch
Confidence               45556677788999999999955 443211100  0111111         11234457899999999999999875


Q ss_pred             c--cCCcEEEecCC
Q 019935          300 F--TEGEIYEINSV  311 (333)
Q Consensus       300 ~--~~g~~~~v~~g  311 (333)
                      .  ..|+++.++||
T Consensus       227 a~~itG~~i~vDGG  240 (244)
T d1pr9a_         227 SGMTTGSTLPVEGG  240 (244)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             hCCcCCcEEEECcc
Confidence            5  45999999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.7e-27  Score=205.44  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=157.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.++.++...+.   .+.++.++.+|++|+++++ ++       
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~-~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVK-KLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            578999999999999999999999999999999999987765543221   1557888999999998887 43       


Q ss_pred             hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +.++|++|||||......   .+.++....+++|+.+++++++++    + ++-+++|++||..+...   +......|+
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~---~~~~~~~Y~  157 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---TMPNISAYA  157 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---CSSSCHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc---cCccccchH
Confidence            458999999999754211   122233446788999999999865    2 35679999999765321   233445666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchH--HHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN--TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      .+|+     .+.+..++.++||++++|.||.+ ..+.......  ......         ....+...+..++|+|++++
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~---------~~~~pl~R~~~pedvA~~v~  227 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWY-RTKMTEAVFSDPEKLDYM---------LKRIPLGRTGVPEDLKGVAV  227 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CSTTTHHHHTCHHHHHHH---------HHTCTTSSCBCGGGGHHHHH
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcc-cCHHHHhccCCHHHHHHH---------HhcCCCCCCCCHHHHHHHHH
Confidence            6653     45666777889999999999955 5554321111  111111         11234456788999999999


Q ss_pred             HhccCcc--cCCcEEEecCC
Q 019935          294 QALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       294 ~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++..  ..|+++.++||
T Consensus       228 fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         228 FLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCcEEEeCcC
Confidence            9998755  45999999987

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.8e-27  Score=210.13  Aligned_cols=222  Identities=13%  Similarity=0.106  Sum_probs=161.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      .|+|||||||||||++|+++|+++|+.|+++++..                  +.|+.|.+.++ .++.  .+|.|+|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~------------------~~~~~~~~~~~-~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVH-DFFASERIDQVYLAA   62 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHH-HHHHHHCCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch------------------hccccCHHHHH-HHHhhcCCCEEEEcc
Confidence            46899999999999999999999999988765431                  25888888887 6664  689999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEeccccccCCCC------------CccchhhhHHHHHHH
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL------------PWSIMNLFGVLKYKK  226 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~SS~~~~~~~~~------------~~~~~~~~~~~k~k~  226 (333)
                      +.............+++++|+.|+.+++++++ .+++||||+||+++|+....            +..+.+.|+  .+|.
T Consensus        63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~--~sK~  140 (315)
T d1e6ua_          63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA--IAKI  140 (315)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH--HHHH
T ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHH--HHHH
Confidence            77542111122334467889999999999884 48999999999999984321            112234566  4455


Q ss_pred             HHHHHH----HhcCCCEEEEEcccccCCCCCCcc------hH-----HHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          227 MGEDFV----QKSGLPFTIIRAGRLTDGPYTSYD------LN-----TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       227 ~~e~~l----~~~gi~~~~vrpg~~~~g~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .+|+.+    ++.|++++++||+.+ |||+..+.      ..     .+.............+++...++++|++|++.+
T Consensus       141 ~~E~~~~~~~~~~gl~~~ilR~~~v-yGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~  219 (315)
T d1e6ua_         141 AGIKLCESYNRQYGRDYRSVMPTNL-YGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  219 (315)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECEE-ESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeccE-ECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHH
Confidence            566555    466999999999955 89875422      11     112333345666788889999999999999999


Q ss_pred             HHHhccCcc--------cCCcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          292 CIQALDIEF--------TEGEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       292 ~~~~l~~~~--------~~g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +..++....        .....++++.+       ...++.++++.+.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~i~~  261 (315)
T d1e6ua_         220 SIHVMELAHEVWLENTQPMLSHINVGTG-------VDCTIRELAQTIAK  261 (315)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEESCS-------CCEEHHHHHHHHHH
T ss_pred             HHHhhhhccccccccccccccccccCCC-------cchHHHHHHHHHHH
Confidence            999986642        12457888774       66788888887653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.94  E-value=7.6e-28  Score=208.45  Aligned_cols=223  Identities=14%  Similarity=0.126  Sum_probs=161.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc----CCCCceEEEEccCCCcCCCchhh-------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++.++....    ....++..+.+|++|+++++ ++       
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~-~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVE-AYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHH-HHHHHHHHH
Confidence            6789999999999999999999999999999999998776554322    22457888999999999887 43       


Q ss_pred             hcCCcEEEEcCCCCCCC--C--CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 FEGVTHVICCTGTTAFP--S--RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~--~--~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      +.++|++|||||.....  .  .+.++....+++|+.+++++++++    + ++-++||++||.....    +......|
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y  156 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR----GIGNQSGY  156 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----BCSSBHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc----CCCCchHH
Confidence            45899999999975311  1  122334457889999999999865    2 2567999999998865    45556677


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc---cceeecCCCCcccccccHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE---RRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      +.+|.     .+.+..++.++||++++|.||.+ ..+.    +..........   .....+-...+...+..++|+|++
T Consensus       157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v-~T~~----~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~  231 (258)
T d1iy8a_         157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAI-WTPM----VENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV  231 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSHH----HHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcc-cCHH----HHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            76664     45666777889999999999955 4332    11111111000   000011223345678999999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCC
Q 019935          292 CIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++..  ..|+++.++||.
T Consensus       232 v~fL~S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         232 VAFLLSDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCCcCceEEcCcch
Confidence            999998754  459999999973

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=3.2e-27  Score=201.89  Aligned_cols=210  Identities=15%  Similarity=0.107  Sum_probs=151.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hc
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.+..         .++..+++|++|+++++ ++       +.
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   72 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLFGVEVDVTDSDAVD-RAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh---------cCceEEEEecCCHHHHH-HHHHHHHHhcC
Confidence            357899999999999999999999999999999999986543         35667899999999887 43       44


Q ss_pred             CCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          151 GVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      ++|++|||||.....   +...++.+..+++|+.+++.+++++     +++.++||++||..+..    +......|+.+
T Consensus        73 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~as  148 (237)
T d1uzma1          73 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----GIGNQANYAAS  148 (237)
T ss_dssp             SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------CCHHHHHH
T ss_pred             CceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc----CCcccHHHHHH
Confidence            799999999976421   1122233457889999999998855     23567999999998865    44455667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      |+     .+.+..++..+||++++|.||.+ ..+......+......         ....+...+..++|+|++++++++
T Consensus       149 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~---------~~~~pl~R~~~pedvA~~v~fL~S  218 (237)
T d1uzma1         149 KAGVIGMARSIARELSKANVTANVVAPGYI-DTDMTRALDERIQQGA---------LQFIPAKRVGTPAEVAGVVSFLAS  218 (237)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCHHHHHSCHHHHHHH---------GGGCTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhhhhcCCceeeeeeeCcC-CChhhhccCHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHhC
Confidence            64     45566677888999999999955 4432111111111111         112344578899999999999998


Q ss_pred             Ccc--cCCcEEEecCC
Q 019935          298 IEF--TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~--~~g~~~~v~~g  311 (333)
                      +..  ..|+++.++||
T Consensus       219 ~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         219 EDASYISGAVIPVDGG  234 (237)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             chhcCCcCCeEEECCC
Confidence            755  45999999987

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.6e-27  Score=206.48  Aligned_cols=222  Identities=13%  Similarity=0.059  Sum_probs=145.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hh
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AI  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~  148 (333)
                      .+++++|++|||||+++||+++++.|+++|++|++++|++++.++..+...  ..++..+.+|++|++++++      +.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999887766543321  4578899999999888762      12


Q ss_pred             h-cCCcEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 F-EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 ~-~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      + ..+|++|||||.....   +...++.+..+++|+.+++++++++    + ++.++||++||.....    +......|
T Consensus        83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y  158 (259)
T d1xq1a_          83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV----SASVGSIY  158 (259)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------CCHH
T ss_pred             hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc----cccccccc
Confidence            3 3589999999986521   1122233447789999999999865    2 3567999999998765    33444566


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+..++..+||++++|.||.+ ..+.......        ......+....+...+..++|+|+++++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i-~T~~~~~~~~--------~~~~~~~~~~~pl~R~~~pedvA~~v~f  229 (259)
T d1xq1a_         159 SATKGALNQLARNLACEWASDGIRANAVAPAVI-ATPLAEAVYD--------DEFKKVVISRKPLGRFGEPEEVSSLVAF  229 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSC-C---------------------------------CCGGGGHHHHHH
T ss_pred             cccccchhhhhHHHHHHhcccCeEEEEeccCcc-cCHHhhhhch--------HHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            66653     46666777889999999999954 5554321111        0111111122344568899999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++.+..  ..|+++.++||
T Consensus       230 L~S~~s~~iTG~~i~vDGG  248 (259)
T d1xq1a_         230 LCMPAASYITGQTICVDGG  248 (259)
T ss_dssp             HTSGGGTTCCSCEEECCCC
T ss_pred             HhCchhcCCcCcEEEeCCC
Confidence            998754  45999999987

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.94  E-value=3.2e-27  Score=203.87  Aligned_cols=220  Identities=15%  Similarity=0.084  Sum_probs=158.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      .+++|++|||||+++||+++++.|+++|++|++.+|++++.+++.++. ..+..++.+|++|++++++      +.+.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            478899999999999999999999999999999999998877766554 5678889999999888772      234589


Q ss_pred             cEEEEcCCCCCCC---CCCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       153 d~vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      |++|||||.....   +.+.++.+..+++|+.+++++++++    ++.-++||++||..+..    +......|+.+|+ 
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~----~~~~~~~Y~asKaa  157 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----PIEQYAGYSASKAA  157 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----CCTTBHHHHHHHHH
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc----CccccccccchhHH
Confidence            9999999976421   1222333457889999999999865    34347999999998865    4555667777764 


Q ss_pred             ----HHHHHHHHHh--cCCCEEEEEcccccCCCCCCcchHHHHHHhhc---ccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          225 ----KKMGEDFVQK--SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG---ERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       225 ----k~~~e~~l~~--~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                          .+.+..++..  ++|++++|.||.+ ..+.       +......   .+.............+..++|+|++++++
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i-~T~~-------~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPM-------MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEE-CCHH-------HHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCC-cCHh-------HHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence                3444455554  4699999999955 3321       1111110   00111111122344688999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|++++++||
T Consensus       230 ~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         230 ASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HSGGGTTCCSCEEEESSS
T ss_pred             hChhhCCCcCcEEEECcc
Confidence            98755  45999999986

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.5e-27  Score=205.36  Aligned_cols=221  Identities=15%  Similarity=0.083  Sum_probs=159.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      ++++|++|||||+++||+++++.|+++|++|++++|++++.+++.++  ..++.++.+|++|+++++ ++       +.+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~-~~~~~~~~~~g~   79 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE--LPGAVFILCDVTQEDDVK-TLVSETIRRFGR   79 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--CTTEEEEECCTTSHHHHH-HHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--cCCCeEEEccCCCHHHHH-HHHHHHHHhcCC
Confidence            57899999999999999999999999999999999999888777654  456889999999999887 43       458


Q ss_pred             CcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      +|++|||||......    .+.+..+..+++|+.+++++++++    +++-+++|++||.....    +......|+.+|
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~----~~~~~~~Y~asK  155 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----GQAQAVPYVATK  155 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----CCTTCHHHHHHH
T ss_pred             CCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc----cccCcchhHHHH
Confidence            999999999754221    112223456889999999999965    23347999999998865    444556677666


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cceeecCCCCcccccccHHHHHHHHHHhcc
Q 019935          224 Y-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRAVLMGQGDKLIGEVSRIVVAEACIQALD  297 (333)
Q Consensus       224 ~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~  297 (333)
                      .     .+.+..++..+||+++.|.||.+ ..+.    +..+....... ......-...+...+..++|+|++++++++
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i-~T~~----~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S  230 (250)
T d1ydea1         156 GAVTAMTKALALDESPYGVRVNCISPGNI-WTPL----WEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS  230 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSB-CCHH----HHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcccCeEEEEEeeCCC-CChh----HHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            4     45666777889999999999955 4332    11110000000 000000112344578999999999999997


Q ss_pred             Ccc-cCCcEEEecCC
Q 019935          298 IEF-TEGEIYEINSV  311 (333)
Q Consensus       298 ~~~-~~g~~~~v~~g  311 (333)
                      +.. ..|+++.++||
T Consensus       231 da~~itG~~i~vDGG  245 (250)
T d1ydea1         231 EANFCTGIELLVTGG  245 (250)
T ss_dssp             HCTTCCSCEEEESTT
T ss_pred             ccCCCcCCeEEECCC
Confidence            522 45999999997

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=2.2e-27  Score=206.04  Aligned_cols=226  Identities=11%  Similarity=0.079  Sum_probs=155.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC---CCCceEEEEccCCCcCCCchhh-------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      +++|++|||||+++||+++++.|+++|++|++.+|+. +..+++.+..   .+.++.++.+|++|+++++ ++       
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~-~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVR-GLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHH-HHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH-HHHHHHHHH
Confidence            5789999999999999999999999999999999974 3343332211   1567889999999999887 44       


Q ss_pred             hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +.++|++|||||......   ...++....+++|+.+++++++++     +++-++||++||..+..    +.+....|+
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~  156 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV----ASANKSAYV  156 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee----ccCCcchhh
Confidence            357999999999865221   122333457889999999999865     23567999999998865    444556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhh--ccc-ceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATA--GER-RAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|.     .+.+..++..+||++++|.||.+ ..+.....+........  ... ....+....+...+..++|+|+++
T Consensus       157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v  235 (260)
T d1x1ta1         157 AAKHGVVGFTKVTALETAGQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTA  235 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB-CC------------------------CHHHHCTTCCCBCHHHHHHHH
T ss_pred             hhhhhHHHhHHHHHHHhchhCcEEEEEecCCC-CChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            6664     45566667788999999999954 55543221111110000  000 000111223455789999999999


Q ss_pred             HHhccCcc--cCCcEEEecCC
Q 019935          293 IQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       293 ~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++..  ..|+++.++||
T Consensus       236 ~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         236 VFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhChhhCCCcCCEEEECcc
Confidence            99998755  45999999997

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.94  E-value=5.3e-27  Score=202.98  Aligned_cols=220  Identities=12%  Similarity=0.089  Sum_probs=157.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~~~~~d~  154 (333)
                      |++|||||+++||++++++|+++|++|++.+|++++.+++.+++.  +.++..+.+|++|++++++      +.+.++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            567999999999999999999999999999999988766543321  5578889999999998872      22458999


Q ss_pred             EEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C----C-CCCeEEEEeccccccCCCCCccchhhhHHHHH-
Q 019935          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P----S-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (333)
Q Consensus       155 vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~----~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-  224 (333)
                      +|||||......   .+.++....+++|+.+++++++++ +    . ...+||++||.+.+.    +......|+.+|. 
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asKaa  157 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----GNPELAVYSSSKFA  157 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----cCcccccchhCHHH
Confidence            999999764211   122233447889999999999864 2    2 346899999998765    4455566776664 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc---c---cceeecCCCCcccccccHHHHHHHHHH
Q 019935          225 ----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG---E---RRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       225 ----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                          .+.+..++..+||++++|.||.+ ..+.    +..+......   .   .....+....+...+..++|+|+++++
T Consensus       158 l~~ltk~lA~el~~~gIrVN~I~PG~i-~T~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f  232 (255)
T d1gega_         158 VRGLTQTAARDLAPLGITVNGYCPGIV-KTPM----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY  232 (255)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSB-SSHH----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred             HHhhHHHHHHHhhhhCcEEEEEecCcc-cChH----HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence                45666777889999999999955 4332    2111111110   0   000011223455678999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+++.++||
T Consensus       233 L~S~~a~~itG~~i~vDGG  251 (255)
T d1gega_         233 LASPDSDYMTGQSLLIDGG  251 (255)
T ss_dssp             HHSGGGTTCCSCEEEESSS
T ss_pred             HhCchhCCccCcEEEecCC
Confidence            998755  45999999997

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=2.3e-27  Score=205.58  Aligned_cols=224  Identities=14%  Similarity=0.092  Sum_probs=158.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh-------hcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------FEGV  152 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~-------~~~~  152 (333)
                      +|++|||||+++||+++++.|+++|++|++.+|++++.++..+++.  +.++.++.+|++|+++++ ++       +.++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~-~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIE-ALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHH-HHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999887766543322  457889999999999887 43       4579


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C------CCCCeEEEEeccccccCCCCCccchhhhHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P------SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~  222 (333)
                      |++|||||......   ...++....+++|+.+++++++++ +      ++..+||++||.....    +......|+.+
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~----~~~~~~~Y~as  156 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----GVVHAAPYSAS  156 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc----ccccchhHHHH
Confidence            99999999865221   122233457889999999999965 2      1446899999998865    44455667766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhc--ccceeecCCCCcccccccHHHHHHHHHHh
Q 019935          223 KY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAG--ERRAVLMGQGDKLIGEVSRIVVAEACIQA  295 (333)
Q Consensus       223 k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  295 (333)
                      |+     .+.+..++.++||++++|.||.+ ..+........+......  .+....+-...+...+..++|+|++++++
T Consensus       157 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL  235 (257)
T d2rhca1         157 KHGVVGFTKALGLELARTGITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL  235 (257)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECSB-CSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCC-CCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            64     45566667778999999999955 443211101111000000  00001112234456789999999999999


Q ss_pred             ccCcc--cCCcEEEecCC
Q 019935          296 LDIEF--TEGEIYEINSV  311 (333)
Q Consensus       296 l~~~~--~~g~~~~v~~g  311 (333)
                      +++..  ..|+++.++||
T Consensus       236 ~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         236 IGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCCcCceEEECcC
Confidence            98755  45999999987

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.93  E-value=7.1e-27  Score=202.54  Aligned_cols=221  Identities=15%  Similarity=0.111  Sum_probs=157.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccC--CCCceEEEEccCCCcCCCchhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      ++++|++|||||+++||+++++.|+++|++|++.+|+.+ ..+.+.+..  .+.++..+.+|++|+++++ ++       
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~-~~~~~~~~~   82 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVI-NLVQSAIKE   82 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHH-HHHHHHHHH
Confidence            578999999999999999999999999999999999854 333332221  1557888999999998887 44       


Q ss_pred             hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC-CCeEEEEeccccccCCCCCccchhhh
Q 019935          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      +.++|++|||||......   ...++....+++|+.+++++++++     +++ .++||++||.+...    +......|
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~----~~~~~~~Y  158 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----PWPLFVHY  158 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHH
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc----cCcccccc
Confidence            348999999999865211   112233446888999999999865     233 34699999998765    44555667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|+     .+.+..++..+||++++|.||.+ ..+........       .+....+....+...+..++|+|+++++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v-~T~~~~~~~~~-------~~~~~~~~~~~pl~R~~~pediA~~v~f  230 (261)
T d1geea_         159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAI-NTPINAEKFAD-------PEQRADVESMIPMGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB-CSGGGHHHHHS-------HHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcC-cCHhHhhhcCC-------HHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            76664     46666777889999999999954 54432111100       0000011122345578899999999999


Q ss_pred             hccCcc--cCCcEEEecCCC
Q 019935          295 ALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++++..  ..|+++.++||-
T Consensus       231 L~S~~s~~itG~~i~vDGG~  250 (261)
T d1geea_         231 LASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCchhcCCcCCeEEECCCe
Confidence            998755  459999999973

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.93  E-value=2.1e-26  Score=200.71  Aligned_cols=220  Identities=11%  Similarity=0.107  Sum_probs=157.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhh-------hc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI-------FE  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~-------~~  150 (333)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++.++..++.. ...+.++.+|++|+++++ ++       +.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVR-NLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHH-HHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHH-HHHHHHHHHcC
Confidence            4788999999999999999999999999999999999988776654432 345788999999999887 44       35


Q ss_pred             CCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          151 GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      ++|++|||||......     ...+.....+++|+.+++++++++     +++.+++|++||...+....   .....|+
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---~~~~~Y~  158 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---GVSHVYT  158 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---TSCHHHH
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc---ccccccc
Confidence            8999999999764221     111223346788999999999855     23567999999987754211   1122455


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc----hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD----LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      .+|.     .+.+..++..+||++++|.||. +.++.....    ......... .       .......+..++|+|++
T Consensus       159 asKaal~~lt~~lA~el~~~gIrVN~I~PG~-i~T~~~~~~~~~~~~~~~~~~~-~-------~~~~~gr~~~pedvA~~  229 (268)
T d2bgka1         159 ATKHAVLGLTTSLCTELGEYGIRVNCVSPYI-VASPLLTDVFGVDSSRVEELAH-Q-------AANLKGTLLRAEDVADA  229 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESC-CSCCCCTTSSSCCHHHHHHHHH-H-------TCSSCSCCCCHHHHHHH
T ss_pred             hhHHHHHhCHHHHHHHhChhCeEEEecCCCC-ccChHHhhhhcCCHHHHHHHHH-h-------ccccCCCCcCHHHHHHH
Confidence            5553     4566677788999999999994 466653211    111111111 0       01233467899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++..  ..|+++.++||
T Consensus       230 v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         230 VAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhChhhCCccCceEEECcC
Confidence            999998755  45999999997

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.93  E-value=3.5e-27  Score=204.61  Aligned_cols=228  Identities=14%  Similarity=0.043  Sum_probs=159.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hhhc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AIFE  150 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~~~  150 (333)
                      .+++|++|||||+++||+++++.|+++|++|++++|++++.++..+.+.  +.++..+.+|++|++++++      +.+.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4688999999999999999999999999999999999887765543321  5578899999999988772      2245


Q ss_pred             CCcEEEEcCCCCCCC----CCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          151 GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      ++|++|||||.....    +.+.+.....+++|+.+++++++++     +++-++||++||..++.    +......|+.
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----~~~~~~~Y~a  157 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK----GPPNMAAYGT  157 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS----CCTTBHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc----CCcchHHHHH
Confidence            899999999975321    1122233447788999999999865     23567999999998865    4445566776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccc-------eeecCCCCcccccccHHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERR-------AVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~v~Dva  289 (333)
                      +|.     .+.+..++..+||++++|.||.+ ..+..................       ...+-...+...+..++|+|
T Consensus       158 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA  236 (260)
T d1zema1         158 SKGAIIALTETAALDLAPYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIP  236 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSH
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEeccCcc-cCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHH
Confidence            664     45666777888999999999955 443211000000000000000       00011123455688999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++++..  ..|+++.++||
T Consensus       237 ~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         237 GVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHhCchhcCccCCeEEeCCC
Confidence            99999998755  45999999985

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.93  E-value=1.6e-26  Score=203.86  Aligned_cols=224  Identities=17%  Similarity=0.217  Sum_probs=165.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh-----hccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-----FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +.|||||||||||||++++++|+++|++|++++|+.......     .......+++++.+|+.+...+. +.+.+++.|
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~v   80 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLV-EAVKNVDVV   80 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHH-HHHHTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhh-hhhhhceee
Confidence            357899999999999999999999999999999976543211     01111567899999999999888 888999999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHh
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK  234 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~  234 (333)
                      ||+++..                +..++.+++++++. +++++++.|+.+....+.........  +...+...+.++++
T Consensus        81 i~~~~~~----------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  142 (307)
T d1qyca_          81 ISTVGSL----------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKS--VFEVKAKVRRAIEA  142 (307)
T ss_dssp             EECCCGG----------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHH--HHHHHHHHHHHHHH
T ss_pred             eeccccc----------------ccchhhHHHHHHHHhccccceeeeccccccccccccccccc--cccccccccchhhc
Confidence            9998753                22345667776644 78889988887665544333333333  33456778888999


Q ss_pred             cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEe-cCCCC
Q 019935          235 SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEI-NSVEG  313 (333)
Q Consensus       235 ~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v-~~g~~  313 (333)
                      .+++++++||+.+ +|+.... +..+............++.++..++|+|++|+|++++.++.++...++.+++ ++   
T Consensus       143 ~~~~~~i~r~~~v-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~---  217 (307)
T d1qyca_         143 EGIPYTYVSSNCF-AGYFLRS-LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLP---  217 (307)
T ss_dssp             HTCCBEEEECCEE-HHHHTTT-TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCG---
T ss_pred             cCCCceeccccee-cCCCccc-hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCC---
Confidence            9999999999965 5654332 1122222233456667788999999999999999999999998766666554 44   


Q ss_pred             CCCCCCcccHHHHHHHHhc
Q 019935          314 EGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       314 ~~~~~~~~s~~e~~~~i~~  332 (333)
                          ++.+|+.|+++.+.+
T Consensus       218 ----~~~~s~~ei~~~~~~  232 (307)
T d1qyca_         218 ----ANTLSLNELVALWEK  232 (307)
T ss_dssp             ----GGEEEHHHHHHHHHH
T ss_pred             ----CCccCHHHHHHHHHH
Confidence                378999999998865

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.2e-27  Score=201.67  Aligned_cols=220  Identities=15%  Similarity=0.123  Sum_probs=156.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc----cCCCCceEEEEccCCCcCCCchhh-------h
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG----KQDEETLQVCKGDTRNPKDLDPAI-------F  149 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~v~~D~~d~~~~~~~~-------~  149 (333)
                      .+|++|||||+++||+++++.|+++|++|++++|+.++.++...    .....++.++.+|++|+++++ ++       +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLR-DTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHH-HHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHH-HHHHHHHHHc
Confidence            57899999999999999999999999999999999877655432    222457889999999998887 43       3


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CC--C-CCeEEEEeccccccCCCCCccchhhhHH
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PS--S-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~--~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .++|++|||||...     ..+.++.+++|+.+++++.+++     ++  + .++||++||.++..    +......|+.
T Consensus        81 G~iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~a  151 (254)
T d2gdza1          81 GRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----PVAQQPVYCA  151 (254)
T ss_dssp             SCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCcCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc----CCCCccchHH
Confidence            58999999999864     2334558899999998888754     22  2 35799999998865    5555667877


Q ss_pred             HHH-----HH--HHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          222 LKY-----KK--MGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       222 ~k~-----k~--~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +|+     .+  .++.++..+||++++|+||.+ ..+......... ......+....+.+..+...+..++|+|+++++
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i-~T~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  229 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFV-NTAILESIEKEE-NMGQYIEYKDHIKDMIKYYGILDPPLIANGLIT  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCB-SSHHHHGGGCHH-HHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCC-CChhhhhccccc-cccccHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            774     22  245677888999999999954 433211000000 000000000001111233467889999999999


Q ss_pred             hccCcccCCcEEEecCCC
Q 019935          295 ALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~  312 (333)
                      +++++...|+++.++||.
T Consensus       230 L~s~~~itG~~i~VdGG~  247 (254)
T d2gdza1         230 LIEDDALNGAIMKITTSK  247 (254)
T ss_dssp             HHHCTTCSSCEEEEETTT
T ss_pred             HHcCCCCCCCEEEECCCC
Confidence            999877789999999984

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=4.1e-26  Score=194.83  Aligned_cols=211  Identities=15%  Similarity=0.054  Sum_probs=151.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhhhcCCcEEEEc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVICC  158 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~~~~d~vi~~  158 (333)
                      +++|++|||||+++||+++++.|+++|++|++.+|+++..++.       +.+++.+|+++. +.+. +.+.++|++|||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~~~~~~~-~~~g~iD~lVnn   73 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRKDLDLLF-EKVKEVDILVLN   73 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTTCHHHHH-HHSCCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHHHHHHHH-HHhCCCcEEEec
Confidence            4689999999999999999999999999999999998776543       346778999864 2222 456789999999


Q ss_pred             CCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc----C-CCCCeEEEEeccccccCCCCCccchhhhHHHHH-----H
Q 019935          159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----K  225 (333)
Q Consensus       159 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~----~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k  225 (333)
                      ||......   ...++....+++|+.+++.+++++    + ++.+++|++||.....    +......|..+|.     .
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~----~~~~~~~Y~asKaal~~lt  149 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----PIENLYTSNSARMALTGFL  149 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHHHHHHHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc----cccccccchhHHHHHHHHH
Confidence            99754211   112223346788999999999865    2 3567999999988765    4445556665553     4


Q ss_pred             HHHHHHHHhcCCCEEEEEcccccCCCCCCcchH-HHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cC
Q 019935          226 KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLN-TLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TE  302 (333)
Q Consensus       226 ~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~  302 (333)
                      +.+..++..+||++++|.||.+ ..+.....+. ....         .+-...+...+..++|+|+++++++++..  ..
T Consensus       150 k~lA~ela~~gIrVN~I~PG~v-~T~~~~~~~~~~~~~---------~~~~~~pl~R~~~pediA~~v~fL~S~~s~~it  219 (234)
T d1o5ia_         150 KTLSFEVAPYGITVNCVAPGWT-ETERVKELLSEEKKK---------QVESQIPMRRMAKPEEIASVVAFLCSEKASYLT  219 (234)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSB-CCTTHHHHSCHHHHH---------HHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhcccCeEEeecccCcc-chhhhhhhcCHHHHH---------HHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCc
Confidence            5666777888999999999954 5543211111 1111         11123455678999999999999998755  45


Q ss_pred             CcEEEecCCC
Q 019935          303 GEIYEINSVE  312 (333)
Q Consensus       303 g~~~~v~~g~  312 (333)
                      |+++.++||-
T Consensus       220 G~~i~vDGG~  229 (234)
T d1o5ia_         220 GQTIVVDGGL  229 (234)
T ss_dssp             SCEEEESTTC
T ss_pred             CcEEEECccc
Confidence            9999999973

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.93  E-value=3.6e-26  Score=197.84  Aligned_cols=225  Identities=13%  Similarity=0.055  Sum_probs=156.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      +++++|+||||||+++||+++++.|+++|++|++++|++++.++..+...  ...+.++.+|++|+++++ ++       
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~-~~~~~~~~~   80 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERD-KLMQTVAHV   80 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHH-HHHHHHHHH
Confidence            46789999999999999999999999999999999999877666543322  456788899999999877 33       


Q ss_pred             h-cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          149 F-EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       149 ~-~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      + ..+|+||||||......   ...++....+++|+.+.+++.+++     +.+.+++|++||..+..    +......|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~----~~~~~~~Y  156 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----ALPSVSLY  156 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----CCTTCHHH
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc----ccccchhH
Confidence            2 24899999999865211   112233346788999999999865     22567999999999865    44555667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|.     .+.+..++.+.||++++|.||.+ ..+.....+....   ...+....+-...+...+..++|+|+++++
T Consensus       157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i-~T~~~~~~~~~~~---~~~~~~~~~~~~~plgR~~~pediA~~v~f  232 (258)
T d1ae1a_         157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVI-LTPLVETAIKKNP---HQKEEIDNFIVKTPMGRAGKPQEVSALIAF  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-C----------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcc-cCcchhhhhhhhh---hhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            76663     35556677788999999999955 5554221111000   000000001111344568999999999999


Q ss_pred             hccCcc--cCCcEEEecCC
Q 019935          295 ALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       295 ~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++..  ..|+.+.++||
T Consensus       233 L~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         233 LCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhChhhCCCcCcEEEeCCC
Confidence            998755  56999999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=2.3e-26  Score=200.01  Aligned_cols=225  Identities=15%  Similarity=0.113  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhh-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      ++++|++|||||+++||++++++|+++|++|++++|+.++.++..+++     ...++.++.+|++|+++++ ++     
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~-~~~~~~~   80 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQD-EILSTTL   80 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHH-HHHHHHH
Confidence            478899999999999999999999999999999999988776654322     1346889999999999887 43     


Q ss_pred             --hcCCcEEEEcCCCCCCCC-------CCCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEecccc-ccCCCCCcc
Q 019935          149 --FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGV-TKFNELPWS  214 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~-~~~~~~~~~  214 (333)
                        +.++|++|||||......       ...+..+..+++|+.+.+++++++    +.+..++|+++|+.. ..    +..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~----~~~  156 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH----ATP  156 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS----CCT
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc----cCC
Confidence              458999999999753110       111223346788999999999865    223356777776653 32    333


Q ss_pred             chhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       215 ~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ....|+.+|.     .+.+..++..+||+++.|.||.+ ..+......  ........  .....+....+...+..++|
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v-~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~Pl~R~g~ped  233 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFY--STMATMKECVPAGVMGQPQD  233 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CCCC--------------H--HHHHHHHHHCTTSSCBCHHH
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCC-CCcchhccCCcHHHHHHHH--HHHHHHHhcCCCCCCcCHHH
Confidence            4455666663     46666777889999999999955 555432110  00000000  00000011124457889999


Q ss_pred             HHHHHHHhccCc-c--cCCcEEEecCC
Q 019935          288 VAEACIQALDIE-F--TEGEIYEINSV  311 (333)
Q Consensus       288 va~a~~~~l~~~-~--~~g~~~~v~~g  311 (333)
                      +|++++++++++ .  ..|+++.++||
T Consensus       234 vA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         234 IAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCCcccCCccCceEEeCCC
Confidence            999999999854 2  56999999997

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=2e-26  Score=201.26  Aligned_cols=226  Identities=14%  Similarity=0.108  Sum_probs=154.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhh-----
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      ++++|++|||||+++||+++++.|+++|++|++.+|++++.++..+++     ...++..+.+|++|+++++ ++     
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~-~~~~~~~   80 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQD-QIINSTL   80 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHH-HHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHH-HHHHHHH
Confidence            578999999999999999999999999999999999988776554322     1346889999999999887 43     


Q ss_pred             --hcCCcEEEEcCCCCCCCCC---CCC----CCCCCcchhHHHHHHHHHhc----CCCCCeEEEEecc-ccccCCCCCcc
Q 019935          149 --FEGVTHVICCTGTTAFPSR---RWD----GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSV-GVTKFNELPWS  214 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~~~---~~~----~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~-~~~~~~~~~~~  214 (333)
                        +.++|++|||||.......   .++    .....+++|+.+++++++++    +++..++|+++|+ +...    +..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~----~~~  156 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ----AQP  156 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS----CCC
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc----CCC
Confidence              4589999999998642111   011    12335678999999999865    2233456666554 4443    344


Q ss_pred             chhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHH
Q 019935          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIV  287 (333)
Q Consensus       215 ~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  287 (333)
                      ....|+.+|+     .+.+..++..+||++++|.||.+ ..+.....  .........  ..........+...+..++|
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~PlgR~g~ped  233 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFY--NFMASHKECIPIGAAGKPEH  233 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCB-CSSHHHHTTCCHHHHHHHH--HHHHHCTTTCTTSSCBCHHH
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC-cchhhhccCCchHHHHHHH--HHHHHHhcCCCCCCCcCHHH
Confidence            4556776664     46666777889999999999954 54432110  000000000  00001112334567899999


Q ss_pred             HHHHHHHhccCcc---cCCcEEEecCCC
Q 019935          288 VAEACIQALDIEF---TEGEIYEINSVE  312 (333)
Q Consensus       288 va~a~~~~l~~~~---~~g~~~~v~~g~  312 (333)
                      +|++++++++++.   ..|+++.++||-
T Consensus       234 iA~~v~fL~S~~as~~iTG~~i~vDGG~  261 (272)
T d1xkqa_         234 IANIILFLADRNLSFYILGQSIVADGGT  261 (272)
T ss_dssp             HHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence            9999999998542   469999999984

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.7e-26  Score=201.57  Aligned_cols=224  Identities=13%  Similarity=0.088  Sum_probs=156.0

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-------CCCceEEEEccCCCcCCCchhh-
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAI-  148 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~D~~d~~~~~~~~-  148 (333)
                      .-.+++|++|||||+++||+++++.|+++|++|++.+|+.++.+...+++       .+.++..+.+|++|+++++ ++ 
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~-~~~   85 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN-NLV   85 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH-HHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHH-HHH
Confidence            44689999999999999999999999999999999999987765433211       2457889999999999887 43 


Q ss_pred             ------hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-C----CCCCeEEEEeccccccCCCCCcc
Q 019935          149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P----SSLKRIVLVSSVGVTKFNELPWS  214 (333)
Q Consensus       149 ------~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~----~~~~~~v~~SS~~~~~~~~~~~~  214 (333)
                            +.++|++|||||......   ...+.....+++|+.+++++++++ +    .+..++|++|+....+     .+
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-----~~  160 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----FP  160 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----CT
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-----cc
Confidence                  458999999999754211   112223347788999999999865 2    2456788887654432     33


Q ss_pred             chhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       215 ~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ....|+.+|.     .+.+..++..+||++++|.||.+ ..+..........     .......-...+...+..++|+|
T Consensus       161 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~-----~~~~~~~~~~~plgR~g~pedvA  234 (297)
T d1yxma1         161 LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI-YSQTAVENYGSWG-----QSFFEGSFQKIPAKRIGVPEEVS  234 (297)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB-CCTGGGTTSGGGG-----GGGGTTGGGGSTTSSCBCTHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcC-cCcchhhhccccC-----HHHHHHHHhcCCCCCCcCHHHHH
Confidence            4455665553     45566677788999999999955 5443211111000     00000111123445788999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++++..  ..|+++.++||.
T Consensus       235 ~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         235 SVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCcCCcEEEeCcCh
Confidence            99999998755  459999999985

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.92  E-value=2.7e-26  Score=197.01  Aligned_cols=214  Identities=16%  Similarity=0.084  Sum_probs=153.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEE-cCcchhhhhhccCC--CCceEEEEccCCCcCCCchhh-------hcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------FEGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~~~-------~~~~  152 (333)
                      +.||||||+++||++++++|+++|++|++.+ |+++..+.+.+...  +.++.++.+|++|+++++ ++       +.++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~-~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVE-AMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHH-HHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH-HHHHHHHHHcCCC
Confidence            4899999999999999999999999999875 45555554433221  567888999999998887 43       3589


Q ss_pred             cEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH
Q 019935          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (333)
Q Consensus       153 d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~  224 (333)
                      |++|||||......   ...+..+..+++|+.+++++++++     +++-++||++||..++.    +......|+.+|.
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----~~~~~~~Y~asKa  156 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----GNIGQANYAAAKA  156 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHHHHH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----CCCCCHHHHHHHH
Confidence            99999999865221   122333457889999999999865     23567999999998865    4445566776664


Q ss_pred             -----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc-cC
Q 019935          225 -----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL-DI  298 (333)
Q Consensus       225 -----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l-~~  298 (333)
                           .+.+..++.++||++++|.||.+ ..+......+.+....         ....+...+..++|+|+++++++ ++
T Consensus       157 al~~ltk~lA~el~~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~---------~~~~pl~R~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         157 GVIGFSKTAAREGASRNINVNVVCPGFI-ASDMTAKLGEDMEKKI---------LGTIPLGRTGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSB-CSHHHHTTCHHHHHHH---------HTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred             HHHHChHHHHHHHhhhCcEEEEEeccee-ccHHHHHhhHHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHHCCc
Confidence                 46666777889999999999955 4432211111221111         12234557889999999999986 44


Q ss_pred             cc--cCCcEEEecCC
Q 019935          299 EF--TEGEIYEINSV  311 (333)
Q Consensus       299 ~~--~~g~~~~v~~g  311 (333)
                      ..  ..|+++.++||
T Consensus       227 ~a~~itG~~i~vdGG  241 (244)
T d1edoa_         227 AASYITGQAFTIDGG  241 (244)
T ss_dssp             GGGGCCSCEEEESTT
T ss_pred             hhcCCcCCeEEeCCC
Confidence            33  45999999997

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=3.8e-26  Score=199.56  Aligned_cols=226  Identities=12%  Similarity=0.067  Sum_probs=156.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhh------
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+++     ...++..+.+|++|+++++ ++      
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~-~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQD-DIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH-HHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHH-HHHHHHHH
Confidence            67899999999999999999999999999999999988766554322     1346889999999998887 43      


Q ss_pred             -hcCCcEEEEcCCCCCCCCC-----CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchh
Q 019935          149 -FEGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                       +.++|++|||||.......     ..+.....+++|+.+.+++++++     +.+.++++++||.+...    +.....
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~----~~~~~~  156 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ----AHSGYP  156 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS----CCTTSH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc----cCCCCc
Confidence             4589999999997542211     11223446788999999999866     23456788888776654    334445


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      .|+.+|.     .+.+..++..+||+++.|.||.+ ..+.....  .........  ......-...+...+..++|+|+
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~--~~~~~~~~~iPlgR~g~pediA~  233 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLY--SFIGSRKECIPVGHCGKPEEIAN  233 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-CSSHHHHTTCCHHHHHHHH--HHHHHCTTTCTTSSCBCHHHHHH
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCC-cCchhhhhcccchhhHHHH--HHHHHHHcCCCCCCCcCHHHHHH
Confidence            6666653     46666777889999999999955 54421100  000000000  00000112234567889999999


Q ss_pred             HHHHhccCc-c--cCCcEEEecCCCC
Q 019935          291 ACIQALDIE-F--TEGEIYEINSVEG  313 (333)
Q Consensus       291 a~~~~l~~~-~--~~g~~~~v~~g~~  313 (333)
                      +++++++.+ .  ..|+++.++||-.
T Consensus       234 ~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         234 IIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHcCCccccCccCcEEEeCcCHH
Confidence            999999743 2  5699999999854

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.92  E-value=2e-25  Score=195.21  Aligned_cols=227  Identities=15%  Similarity=0.088  Sum_probs=156.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      ++++|++|||||+++||+++++.|+++|++|++++|++++.+++.+.. +.++..+.+|++|++++++      +.+.++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            578899999999999999999999999999999999988877665443 5678899999999988772      224589


Q ss_pred             cEEEEcCCCCCCCCCCCCC--------CCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          153 THVICCTGTTAFPSRRWDG--------DNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      |++|||||...........        ....+++|+.+++++++++    ++.-+++|+++|..+..    +......|+
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~----~~~~~~~Y~  156 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY----PNGGGPLYT  156 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----TTSSCHHHH
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc----CCCCCchHH
Confidence            9999999976432211111        2345788999999999865    22236899999887754    444556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHH-HhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLK-ATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|+     .+.+..++.+ +|++++|.||.+ ..+........... ..........+....+...+..++|+|+++++
T Consensus       157 asKaal~~ltr~lA~ela~-~IrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~f  234 (276)
T d1bdba_         157 AAKHAIVGLVRELAFELAP-YVRVNGVGSGGI-NSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECCC-CSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhc-ceEEcccCCCCE-ecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            6664     3445555655 499999999955 55543221111111 00000111112233455678899999999999


Q ss_pred             hccCc-c--cCCcEEEecCCC
Q 019935          295 ALDIE-F--TEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~-~--~~g~~~~v~~g~  312 (333)
                      ++..+ .  ..|++++++||-
T Consensus       235 L~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSG
T ss_pred             HcCCcccCCeeCcEEEECcCh
Confidence            98742 2  559999999974

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.92  E-value=8.3e-26  Score=197.79  Aligned_cols=214  Identities=19%  Similarity=0.219  Sum_probs=162.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+|||||||||||++|+++|.++|++|++++|+.                   +|+.|.++++ +.++  ++|+|||+|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~-~~l~~~~~d~vih~a~   61 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVN-KFFNEKKPNVVINCAA   61 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHH-HHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHH-HHHHHcCCCEEEeecc
Confidence            5799999999999999999999999999998852                   4888988888 7776  6799999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCC-------CCccchhhhHHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ...... ....+......|+....++.+.++.....++++||..+++...       .+..+...|+  +.|...|.+++
T Consensus        62 ~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~--~~k~~~e~~~~  138 (281)
T d1vl0a_          62 HTAVDK-CEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG--KTKLEGENFVK  138 (281)
T ss_dssp             CCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH--HHHHHHHHHHH
T ss_pred             cccccc-ccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhhh--hhhhHHHHHHH
Confidence            754111 1112233456677777777777665556888888888876432       2333444454  67788999999


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcccCCcEEEecCCCC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEGEIYEINSVEG  313 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~v~~g~~  313 (333)
                      +.+.+++++||+.+ ||+.... ...++..+........++  +..+++++++|+++++..++++...  .+||++++  
T Consensus       139 ~~~~~~~i~R~~~v-yG~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~--g~~~~~~~--  210 (281)
T d1vl0a_         139 ALNPKYYIVRTAWL-YGDGNNF-VKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY--GTFHCTCK--  210 (281)
T ss_dssp             HHCSSEEEEEECSE-ESSSSCH-HHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC--EEEECCCB--
T ss_pred             HhCCCccccceeEE-eCCCccc-ccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc--CceeEeCC--
Confidence            99999999999955 8887664 444555555455555544  5789999999999999999988643  58999985  


Q ss_pred             CCCCCCcccHHHHHHHHhc
Q 019935          314 EGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       314 ~~~~~~~~s~~e~~~~i~~  332 (333)
                           +.+++.|+++.+++
T Consensus       211 -----~~~s~~e~~~~i~~  224 (281)
T d1vl0a_         211 -----GICSWYDFAVEIFR  224 (281)
T ss_dssp             -----SCEEHHHHHHHHHH
T ss_pred             -----CccchHHHHHHHHH
Confidence                 77999999998875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.92  E-value=2.7e-25  Score=190.40  Aligned_cols=217  Identities=16%  Similarity=0.123  Sum_probs=155.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-------hcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEG  151 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------~~~  151 (333)
                      .+++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+.. +.++.++++|++|+++++ ++       +.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~i~-~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADVSDPKAVE-AVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCTTSHHHHH-HHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCceEEEEecCCCHHHHH-HHHHHHHHHhCC
Confidence            467899999999999999999999999999999999998887766554 567888999999999887 43       357


Q ss_pred             CcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC---CCCCeEEEEeccccccCCCCCccchhhhHHHH--
Q 019935          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK--  223 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k--  223 (333)
                      +|++|||||......   .+.+.....+++|+.+.+++++++.   ...+.++++||.+..     +.+....|+.+|  
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----GAFGLAHYAAGKLG  154 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----CHHHHHHHHHCSSH
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----cccCccccchhhHH
Confidence            999999998764211   1222233467889999999999652   123456666655543     223444565444  


Q ss_pred             ---HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc
Q 019935          224 ---YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF  300 (333)
Q Consensus       224 ---~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~  300 (333)
                         +.+.+..++..+|+++++|.||.+ ..+......+.......         +..+...+..++|+|+++++++++..
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v-~T~~~~~~~~~~~~~~~---------~~~p~~r~~~p~dva~~v~fL~S~~s  224 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLI-QTPMTAGLPPWAWEQEV---------GASPLGRAGRPEEVAQAALFLLSEES  224 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSB-CCGGGTTSCHHHHHHHH---------HTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcC-CCHHHHhhhHhHHHHHH---------hCCCCCCCcCHHHHHHHHHHHhcchh
Confidence               456666777888999999999954 55543221222222111         12334568899999999999998755


Q ss_pred             --cCCcEEEecCCC
Q 019935          301 --TEGEIYEINSVE  312 (333)
Q Consensus       301 --~~g~~~~v~~g~  312 (333)
                        ..|+++.++||.
T Consensus       225 ~~itG~~i~vDGG~  238 (241)
T d2a4ka1         225 AYITGQALYVDGGR  238 (241)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             CCCcCceEEeCCCc
Confidence              559999999983

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.92  E-value=3.9e-25  Score=200.20  Aligned_cols=243  Identities=14%  Similarity=0.122  Sum_probs=168.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhc--CCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~  157 (333)
                      ++|+|||||||||||++|++.|+++|++|++++|+..+...+.... ...+++++.+|++|++.+. +++.  .+|+|+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~-~~~~~~~~~~v~~   85 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLL-ESIREFQPEIVFH   85 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHH-HHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhh-hhhhhchhhhhhh
Confidence            5789999999999999999999999999999999876554432211 1457999999999999988 6665  6799999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-C-CCeEEEEeccccccC--------CCCCccchhhhHHHHHH--
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKF--------NELPWSIMNLFGVLKYK--  225 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~-~~~~v~~SS~~~~~~--------~~~~~~~~~~~~~~k~k--  225 (333)
                      +|+..... ..+..+...+++|+.|+.+++++++. + .+.+++.|+...+..        ++.+..+.+.|+..|..  
T Consensus        86 ~aa~~~~~-~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e  164 (356)
T d1rkxa_          86 MAAQPLVR-LSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAE  164 (356)
T ss_dssp             CCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHH
T ss_pred             hhcccccc-ccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccch
Confidence            99875321 11233455788899999999998854 4 455666555554432        23345566777765542  


Q ss_pred             HHHHHHH---------HhcCCCEEEEEcccccCCCCCCc---chHHHHHHhhcccceeecCCCCcccccccHHHHHHHHH
Q 019935          226 KMGEDFV---------QKSGLPFTIIRAGRLTDGPYTSY---DLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACI  293 (333)
Q Consensus       226 ~~~e~~l---------~~~gi~~~~vrpg~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~  293 (333)
                      ..+..+.         ...++.++++||+.+ |||....   ....+.+... ......++.+...++++|++|++.+++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v-yGp~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~a~~  242 (356)
T d1rkxa_         165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNV-IGGGDWALDRIVPDILRAFE-QSQPVIIRNPHAIRPWQHVLEPLSGYL  242 (356)
T ss_dssp             HHHHHHHHHHSCGGGHHHHCCEEEEEECCCE-ECTTCCCSSCHHHHHHHHHH-TTCCEECSCTTCEECCEETHHHHHHHH
T ss_pred             hhhhHHhhhcccchhccccCceEEeccCCCe-eCCCcchhhHHHHHHHHHHh-CCCceEEeeccccccccccccccchhh
Confidence            1111111         245789999999966 7876522   1334445544 344456788889999999999999999


Q ss_pred             HhccCcccC----CcEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          294 QALDIEFTE----GEIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       294 ~~l~~~~~~----g~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      .++..+...    +...+...+.     ....++.++++.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~  280 (356)
T d1rkxa_         243 LLAQKLYTDGAEYAEGWNFGPND-----ADATPVKNIVEQMVK  280 (356)
T ss_dssp             HHHHHHHHTCGGGCSEEECCCCG-----GGCEEHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccc-----ccccccchhhhhhHH
Confidence            998874422    3334443322     256788888887754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.92  E-value=1.3e-25  Score=194.70  Aligned_cols=223  Identities=16%  Similarity=0.109  Sum_probs=157.4

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhh------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------  148 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~------  148 (333)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.++.++..++.   .+.++..+.+|++|+++++ ++      
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~-~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVT-KTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHH-HHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHH-HHHHHHHH
Confidence            3678999999999999999999999999999999999987765443221   1567889999999999887 43      


Q ss_pred             -hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----C-CCCCeEEEEeccccccCCC---CCccc
Q 019935          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNE---LPWSI  215 (333)
Q Consensus       149 -~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~-~~~~~~v~~SS~~~~~~~~---~~~~~  215 (333)
                       +.++|++|||||......   ...++.+..+++|+.+++++++++     + ...++++.+||........   .+...
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~  163 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT  163 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcc
Confidence             347999999999764211   112223346788999999998854     1 2445777777766543211   11223


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      ...|+.+|.     .+.+..++.++||++++|.||.+ ..+......+.+.....         ...+...+..++|+|+
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~~---------~~~pl~R~g~pedvA~  233 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV-NTDQTAHMDKKIRDHQA---------SNIPLNRFAQPEEMTG  233 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB-CCGGGGGSCHHHHHHHH---------HTCTTSSCBCGGGGHH
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcc-cCcchhccCHHHHHHHH---------hcCCCCCCcCHHHHHH
Confidence            455666664     45666777889999999999954 55543322222222221         1234456888999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ++++++++..  ..|+++.++||
T Consensus       234 ~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         234 QAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHhcchhCCCcCceEEECCC
Confidence            9999998765  45999999997

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.91  E-value=2.6e-25  Score=190.28  Aligned_cols=195  Identities=14%  Similarity=0.160  Sum_probs=145.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCe-------EEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------h
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------A  147 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~-------V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~  147 (333)
                      ++||||||+++||+++++.|+++|++       |++.+|+.++.+++..+..  +.++.++.+|++|++++++      +
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999987       8889999887766543321  4567889999999998872      2


Q ss_pred             hhcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhh
Q 019935          148 IFEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  219 (333)
                      .+.++|++|||||......   .+.++....+++|+.|++++++++     +++-++||++||.+++.    +.+....|
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y  157 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----AFRHSSIY  157 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC----CCCCChHH
Confidence            2458999999999865221   122333457889999999999866     23567999999998876    55556677


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHH
Q 019935          220 GVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       220 ~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      +.+|+     .+.+..+++++||++++|.||.+ ..+.....                  .......+..++|+|+++++
T Consensus       158 ~asK~al~~lt~~la~el~~~gIrvn~i~PG~v-~T~~~~~~------------------~~~~~~~~~~PedvA~~v~~  218 (240)
T d2bd0a1         158 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAV-YTPMWGKV------------------DDEMQALMMMPEDIAAPVVQ  218 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB-CSTTTCCC------------------CSTTGGGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcc-cCchhhhc------------------CHhhHhcCCCHHHHHHHHHH
Confidence            77764     45666777889999999999955 54432210                  11122356789999999999


Q ss_pred             hccCcc
Q 019935          295 ALDIEF  300 (333)
Q Consensus       295 ~l~~~~  300 (333)
                      +++++.
T Consensus       219 l~s~~~  224 (240)
T d2bd0a1         219 AYLQPS  224 (240)
T ss_dssp             HHTSCT
T ss_pred             HHcCCc
Confidence            998865

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.91  E-value=1.1e-25  Score=194.18  Aligned_cols=219  Identities=10%  Similarity=-0.010  Sum_probs=151.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCCcEEEE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGVTHVIC  157 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~d~vi~  157 (333)
                      ++|||||+++||+++++.|+++|++|++.+|+.++.+++...    ...+..+|++|++++++      +.+.++|++||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            689999999999999999999999999999988776665421    22344689999888772      23458999999


Q ss_pred             cCCCCCC--CC--CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH----
Q 019935          158 CTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (333)
Q Consensus       158 ~a~~~~~--~~--~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~----  224 (333)
                      |||....  +.  ...++....+++|+.+++++++++     +++-++||++||.+...    +......|+.+|.    
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~----~~~~~~~Y~asKaal~~  153 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----PWKELSTYTSARAGACT  153 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----CCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc----ccccccccccccccHHH
Confidence            9987531  11  111223346688999999999865     23567999999998876    4455566776664    


Q ss_pred             -HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--c
Q 019935          225 -KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--T  301 (333)
Q Consensus       225 -k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~  301 (333)
                       .+.+..++.++||++++|.||.+ .++........-.... ..+....+....+...+..++|+|+++++++++..  .
T Consensus       154 lt~~lA~ela~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  231 (252)
T d1zmta1         154 LANALSKELGEYNIPVFAIGPNYL-HSEDSPYFYPTEPWKT-NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL  231 (252)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSB-CCBTCCSSCBHHHHTT-CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHHhcccCcEEEEEecCCC-cCcchhhhhhcccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence             46666778889999999999955 5554332111000000 00000001111234568899999999999998765  4


Q ss_pred             CCcEEEecCCC
Q 019935          302 EGEIYEINSVE  312 (333)
Q Consensus       302 ~g~~~~v~~g~  312 (333)
                      .|+++.++||-
T Consensus       232 TG~~i~vdGG~  242 (252)
T d1zmta1         232 TGQVFWLAGGF  242 (252)
T ss_dssp             TTCEEEESTTC
T ss_pred             cCCeEEECCCc
Confidence            59999999974

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=8.5e-25  Score=189.28  Aligned_cols=218  Identities=15%  Similarity=0.102  Sum_probs=151.1

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhh-------
Q 019935           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      ++++|++|||||+|  +||++++++|+++|++|++.+|+++..+...+.. ......++.+|++|+++++ ++       
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~-~~~~~~~~~   83 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELD-ALFAGVKEA   83 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHH-HHHHHHHHh
Confidence            57899999999988  8999999999999999999998865433221111 1446778999999998887 44       


Q ss_pred             hcCCcEEEEcCCCCCCC-------CCCCCCCCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhh
Q 019935          149 FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      +.++|++|||||.....       +...++....+++|+.+.+.+++++..   .-+++|++||..+..    +.+....
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~----~~~~~~~  159 (256)
T d1ulua_          84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----VVPKYNV  159 (256)
T ss_dssp             HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----BCTTCHH
T ss_pred             cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC----CCCCchH
Confidence            45799999999975310       011111223567899999999986532   225899999998865    4455566


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcc--hHHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYD--LNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|.     .+.+..++..+||++++|.||.+ ..+.....  .........         ...+...+..++|+|++
T Consensus       160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i-~t~~~~~~~~~~~~~~~~~---------~~~pl~R~~~pedvA~~  229 (256)
T d1ulua_         160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPV-RTVAARSIPGFTKMYDRVA---------QTAPLRRNITQEEVGNL  229 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHH---------HHSTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEeeecccee-eeccccchhhhHHHHHHHH---------hcCCCCCCcCHHHHHHH
Confidence            776664     45666777889999999999955 44432211  111111111         11234568899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCC
Q 019935          292 CIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      +++++++..  ..|+++.++||
T Consensus       230 v~fL~S~~s~~itG~~i~VDGG  251 (256)
T d1ulua_         230 GLFLLSPLASGITGEVVYVDAG  251 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhCCccCCeEEECcC
Confidence            999998765  45999999997

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.4e-25  Score=187.78  Aligned_cols=223  Identities=14%  Similarity=0.088  Sum_probs=157.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhhcCCcEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFEGVTHV  155 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~~~~d~v  155 (333)
                      ..+++|++|||||+++||+++++.|+++|++|++.+|++++.+++.+   ..+++...+|+.+.+..+.  ..+.++|++
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG---STTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---ccCCceeeeeccccccccccccccccceeE
Confidence            34789999999999999999999999999999999999988877654   4567888889877665551  234589999


Q ss_pred             EEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhHHHHH---
Q 019935          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (333)
Q Consensus       156 i~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~---  224 (333)
                      |||||......   ...+.....+++|+.+++.+++++     +.+..+||++||.....   .+......|+.+|.   
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---~~~~~~~~Y~~sKaal~  155 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---KGVVNRCVYSTTKAAVI  155 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---BCCTTBHHHHHHHHHHH
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---CCccchhHHHHHHHHHH
Confidence            99999865321   112233346788999999999865     22557999999876521   13455566776664   


Q ss_pred             --HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccc-eeecCCCCcccccccHHHHHHHHHHhccCcc-
Q 019935          225 --KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAEACIQALDIEF-  300 (333)
Q Consensus       225 --k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~-  300 (333)
                        .+.+..++..+||++++|.||.+ .++...    ........... ...+-...+...+..++|+|+++.+++.++. 
T Consensus       156 ~l~r~lA~e~~~~gIrvN~I~PG~i-~T~~~~----~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         156 GLTKSVAADFIQQGIRCNCVCPGTV-DTPSLQ----ERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCE-ECHHHH----HHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHhhhhCcEEEEEeecee-echhhH----hhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence              35556777788999999999955 443211    11111000000 0011122445678999999999999998755 


Q ss_pred             -cCCcEEEecCC
Q 019935          301 -TEGEIYEINSV  311 (333)
Q Consensus       301 -~~g~~~~v~~g  311 (333)
                       ..|+++.++||
T Consensus       231 ~iTG~~i~VDGG  242 (245)
T d2ag5a1         231 YVTGNPVIIDGG  242 (245)
T ss_dssp             TCCSCEEEECTT
T ss_pred             CCcCceEEeCCC
Confidence             45999999997

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=8e-25  Score=184.06  Aligned_cols=190  Identities=21%  Similarity=0.237  Sum_probs=130.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      .|+|||||||||||++|+++|+++|+  +|++++|++...        ...+..   +..|..++.......+|+|||++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~~~~---~~~d~~~~~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPRLDN---PVGPLAELLPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTTEEC---CBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------cccccc---cccchhhhhhccccchheeeeee
Confidence            37999999999999999999999997  667777754221        223333   33333333313445789999999


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCC
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP  238 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~  238 (333)
                      |....   .......+.++|+.++.+++++++. ++++|+++||.+++...      .+.|+  +.|..+|+.+++.+++
T Consensus        71 g~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~------~~~y~--~~K~~~E~~l~~~~~~  139 (212)
T d2a35a1          71 GTTIK---EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS------SIFYN--RVKGELEQALQEQGWP  139 (212)
T ss_dssp             CCCHH---HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------SSHHH--HHHHHHHHHHTTSCCS
T ss_pred             eeecc---ccccccccccchhhhhhhccccccccccccccccccccccccc------ccchh--HHHHHHhhhccccccc
Confidence            86531   1122244778899999999998854 89999999999987532      23444  6788899999998885


Q ss_pred             -EEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          239 -FTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       239 -~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                       ++++||+ +++|+.....+..+.     ......+  ....+.+||++|+|++++.++.++..
T Consensus       140 ~~~I~Rp~-~v~G~~~~~~~~~~~-----~~~~~~~--~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         140 QLTIARPS-LLFGPREEFRLAEIL-----AAPIARI--LPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             EEEEEECC-SEESTTSCEEGGGGT-----TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             cceeeCCc-ceeCCcccccHHHHH-----HHHHhhc--cCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence             9999999 557887654322211     0111111  11234579999999999999988653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.3e-24  Score=186.35  Aligned_cols=219  Identities=19%  Similarity=0.176  Sum_probs=147.3

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCch------
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDP------  146 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~------  146 (333)
                      |.++++|++|||||+++||+++++.|+++|++|++.+|++++.+++.+++    ...++.++.+|++|++++++      
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            55688999999999999999999999999999999999988776654332    13468889999999998872      


Q ss_pred             hhhcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCC--CCeEEEEeccccccCCCCCccch
Q 019935          147 AIFEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS--LKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       147 ~~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~--~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                      +.+.++|++|||||......   ...+.....+++|+.+.+++.+++     +.+  -++||++||.+.+..  .|....
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--~p~~~~  162 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV--LPLSVT  162 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--CSCGGG
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC--CCCccc
Confidence            22458999999999864211   112223346788999999988754     222  469999999987531  234445


Q ss_pred             hhhHHHHH-----HHHHHHHH--HhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLKY-----KKMGEDFV--QKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k~-----k~~~e~~l--~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|+     .+.+..++  ...||++++|.||.+ ..+.............         ........++.++|+|
T Consensus       163 ~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i-~t~~~~~~~~~~~~~~---------~~~~~~~r~~~pedvA  232 (257)
T d1xg5a_         163 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ETQFAFKLHDKDPEKA---------AATYEQMKCLKPEDVA  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB-CSSHHHHHTTTCHHHH---------HHHHC---CBCHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC-CChhhhhcChhhHHHH---------HhcCCCCCCcCHHHHH
Confidence            56776664     23344444  457999999999944 3322110000000000         0112334678999999


Q ss_pred             HHHHHhccCcc--cCCcEEE
Q 019935          290 EACIQALDIEF--TEGEIYE  307 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~  307 (333)
                      ++++++++++.  ..|+++.
T Consensus       233 ~~v~fL~s~~a~~itG~i~i  252 (257)
T d1xg5a_         233 EAVIYVLSTPAHIQIGDIQM  252 (257)
T ss_dssp             HHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHHHHhCChhcCeECCEEE
Confidence            99999998865  2366433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.90  E-value=4.7e-24  Score=192.85  Aligned_cols=225  Identities=16%  Similarity=0.062  Sum_probs=158.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +.|+|+|||||||||++|+++|+++||+|++++|++++...... ....+++++.+|+.|+.++...++.++|+++++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-cccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            35799999999999999999999999999999998765432210 11568999999999966543278899999998864


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCE
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF  239 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~  239 (333)
                      .             ....++..+.+++++++. +++++++.||........  ......+.  ..|...+.++++.++++
T Consensus        81 ~-------------~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~--~~~~~~~~--~~k~~~~~~~~~~~~~~  143 (350)
T d1xgka_          81 S-------------QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG--PWPAVPMW--APKFTVENYVRQLGLPS  143 (350)
T ss_dssp             S-------------TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS--SCCCCTTT--HHHHHHHHHHHTSSSCE
T ss_pred             c-------------ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC--cccchhhh--hhHHHHHHHHHhhccCc
Confidence            3             233577888999998854 888888888876543221  11222222  55677888999999999


Q ss_pred             EEEEcccccCCCCCCcchHHHH--HHhhcccceeecCCCCcccccccH-HHHHHHHHHhccCc--ccCCcEEEecCCCCC
Q 019935          240 TIIRAGRLTDGPYTSYDLNTLL--KATAGERRAVLMGQGDKLIGEVSR-IVVAEACIQALDIE--FTEGEIYEINSVEGE  314 (333)
Q Consensus       240 ~~vrpg~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~~~~l~~~--~~~g~~~~v~~g~~~  314 (333)
                      +++||+.++ +.........+.  ....+........+++....|+++ +|+++++..++.+.  ...|+.|++++    
T Consensus       144 ~~vr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g----  218 (350)
T d1xgka_         144 TFVYAGIYN-NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF----  218 (350)
T ss_dssp             EEEEECEEG-GGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS----
T ss_pred             eeeeeceee-ccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC----
Confidence            999999663 322111000000  000111222344456777788876 79999999999763  24588999987    


Q ss_pred             CCCCCcccHHHHHHHHhc
Q 019935          315 GPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       315 ~~~~~~~s~~e~~~~i~~  332 (333)
                          +.+|+.|+++.+++
T Consensus       219 ----~~~T~~eia~~l~~  232 (350)
T d1xgka_         219 ----ETLSPVQVCAAFSR  232 (350)
T ss_dssp             ----EEECHHHHHHHHHH
T ss_pred             ----CcCCHHHHHHHHHH
Confidence                56899999999865

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.6e-24  Score=191.38  Aligned_cols=210  Identities=13%  Similarity=0.070  Sum_probs=148.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch---------hhhhhccCCCCceEEEEccCCCcCCCch-
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK---------ATTLFGKQDEETLQVCKGDTRNPKDLDP-  146 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---------~~~~~~~~~~~~~~~v~~D~~d~~~~~~-  146 (333)
                      ++++++|++|||||+++||+++++.|+++|++|++.+|+.+.         .+++.+.. ......+.+|+.|.+++++ 
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEI-RRRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHH-HHTTCEEEEECCCGGGHHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHH-hhcccccccccchHHHHHHH
Confidence            346889999999999999999999999999999999876532         22222211 2234456789988877662 


Q ss_pred             -----hhhcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCc
Q 019935          147 -----AIFEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPW  213 (333)
Q Consensus       147 -----~~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~  213 (333)
                           +.+.++|++|||||......   ...++.+..+++|+.|++++++++     +++-++||++||..+..    +.
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~----~~  156 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----GN  156 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CC
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC----CC
Confidence                 23458999999999865221   112233457889999999999965     23567999999998765    34


Q ss_pred             cchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHH
Q 019935          214 SIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       214 ~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  288 (333)
                      .....|+.+|+     .+.+..++.++||++++|.||.+ ........                   ......++.++|+
T Consensus       157 ~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~-~t~~~~~~-------------------~~~~~~~~~Pedv  216 (302)
T d1gz6a_         157 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-------------------PEDLVEALKPEYV  216 (302)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-------------------CHHHHHHSCGGGT
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC-CcchhhcC-------------------cHhhHhcCCHHHH
Confidence            45566776664     45666777888999999999954 22221110                   1122345678999


Q ss_pred             HHHHHHhccCcc-cCCcEEEecCC
Q 019935          289 AEACIQALDIEF-TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~-~~g~~~~v~~g  311 (333)
                      |+++++++++.. ..|+++.++||
T Consensus       217 A~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         217 APLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             HHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHcCCCcCCCCcEEEeCCC
Confidence            999999997543 45899999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.90  E-value=4.6e-24  Score=184.01  Aligned_cols=215  Identities=14%  Similarity=0.140  Sum_probs=151.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh---ccCCCCceEEEEccCC-CcCCCch------hh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF---GKQDEETLQVCKGDTR-NPKDLDP------AI  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~~~v~~D~~-d~~~~~~------~~  148 (333)
                      ++++|+||||||+++||++++++|+++|++|+++.|+.++.+.+.   ......++.++.+|++ +.+++++      +.
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999988766544332   2223567889999998 4444541      22


Q ss_pred             hcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CC---CCCeEEEEeccccccCCCCCccchhhhH
Q 019935          149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +.++|+||||||...     .+..+..+++|+.|++++++++     +.   ..++||++||..++.    +......|+
T Consensus        82 ~g~iDilvnnAG~~~-----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~----~~~~~~~Y~  152 (254)
T d1sbya1          82 LKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN----AIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTSHHHH
T ss_pred             cCCCCEEEeCCCCCC-----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc----CCCCCHHHH
Confidence            458999999999753     3344558999999999999865     21   246899999999875    555566777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccccee-ecCCCCcccccccHHHHHHHHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAV-LMGQGDKLIGEVSRIVVAEACIQ  294 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~  294 (333)
                      .+|+     .+.+..++...||+++.|.||.+ ..+.        .+......... .+......+...+++++|++++.
T Consensus       153 asKaal~~~t~~la~el~~~gIrVn~I~PG~v-~T~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~  223 (254)
T d1sbya1         153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGIT-RTPL--------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVK  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSE-ESHH--------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccCeEEEEEEeCCC-cCcc--------ccccccchhHHHHHHhccccCCCCCHHHHHHHHHH
Confidence            6664     45666777889999999999955 4331        11110000000 00000112245689999999999


Q ss_pred             hccCcccCCcEEEecCCC
Q 019935          295 ALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       295 ~l~~~~~~g~~~~v~~g~  312 (333)
                      +++.. ..|+++.+++|.
T Consensus       224 ~~~~~-~tG~vi~vdgG~  240 (254)
T d1sbya1         224 AIEAN-KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHC-CTTCEEEEETTE
T ss_pred             hhhCC-CCCCEEEECCCE
Confidence            88765 468999999974

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.89  E-value=1.3e-23  Score=185.40  Aligned_cols=222  Identities=13%  Similarity=0.071  Sum_probs=152.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCch------h
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDP------A  147 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~------~  147 (333)
                      ..++++|++|||||+|+||++++++|+++|++|++++|+.++.++..++.   .+..+.++.+|++|+++++.      +
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            34789999999999999999999999999999999999987765543222   15678899999999998772      2


Q ss_pred             hhcCCcEEEEcCCCCCCCCCC---CCCCCCCcchhHHHHHHHHHhc------CCCCCeEEEEeccccccCCCCCccchhh
Q 019935          148 IFEGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~------~~~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      .+.++|++|||||........   .......+.+|..+...+..+.      ......++++||.....    +......
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~----~~~~~~~  175 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET----GSGFVVP  175 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH----CCTTCHH
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh----cccccch
Confidence            245899999999986532111   1112234566777777766533      22445788888877654    3334445


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch---HHHHHHhhcccceeecCCCCcccccccHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL---NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAE  290 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  290 (333)
                      |+.+|.     .+.+..++..+||++++|.||.+ ..+......   ......         +-...+...+..++|+|+
T Consensus       176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~---------~~~~~pl~R~~~pediA~  245 (294)
T d1w6ua_         176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI-KTKGAFSRLDPTGTFEKE---------MIGRIPCGRLGTVEELAN  245 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CC------CCTTSHHHHH---------HHTTCTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCcc-ccchhhhccCCcHHHHHH---------HhhcCCCCCCCCHHHHHH
Confidence            665553     45666777788999999999955 554422111   111111         111234457889999999


Q ss_pred             HHHHhccCcc--cCCcEEEecCCC
Q 019935          291 ACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       291 a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      ++.+++++..  ..|+++.++||.
T Consensus       246 ~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         246 LAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHhCchhcCCCCcEEEECCCh
Confidence            9999998755  569999999984

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.89  E-value=9.1e-24  Score=185.90  Aligned_cols=220  Identities=17%  Similarity=0.188  Sum_probs=159.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a~  160 (333)
                      |+|||||||||||++|+++|.+.|+.| ++++....               +.+|++|.+.++ +.++  ++|+|||+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~---------------~~~Dl~~~~~~~-~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE---------------FCGDFSNPKGVA-ETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS---------------SCCCTTCHHHHH-HHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc---------------ccCcCCCHHHHH-HHHHHcCCCEEEEecc
Confidence            579999999999999999999998754 44443211               247999998888 7776  5699999999


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccC-------CCCCccchhhhHHHHHHHHHHHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGEDFVQ  233 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~-------~~~~~~~~~~~~~~k~k~~~e~~l~  233 (333)
                      ..... ..+..+...++.|+.++.+++++++....+++++||..+|+.       +..+..+.+.|+  +.|..+|.++.
T Consensus        64 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~--~~k~~~e~~~~  140 (298)
T d1n2sa_          64 HTAVD-KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG--KTKLAGEKALQ  140 (298)
T ss_dssp             CCCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH--HHHHHHHHHHH
T ss_pred             ccccc-ccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHh--hhhhhhhhhHH
Confidence            76422 223444557788999999999999775568888898888753       223444556666  56777899998


Q ss_pred             hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC---cccCCcEEEecC
Q 019935          234 KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI---EFTEGEIYEINS  310 (333)
Q Consensus       234 ~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~---~~~~g~~~~v~~  310 (333)
                      .......++|++.++++.+... ...+...+.........  ++...+++++.|+++++..++..   ....+++||+++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~  217 (298)
T d1n2sa_         141 DNCPKHLIFRTSWVYAGKGNNF-AKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA  217 (298)
T ss_dssp             HHCSSEEEEEECSEECSSSCCH-HHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCC
T ss_pred             hhhcccccccccceeeccCCcc-chhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccccccccccC
Confidence            8888888899887766655443 33344444434333333  45678899999999998888753   233467999998


Q ss_pred             CCCCCCCCCcccHHHHHHHHhc
Q 019935          311 VEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       311 g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      +       +..++.|+++.+.+
T Consensus       218 ~-------~~~~~~~~~~~i~~  232 (298)
T d1n2sa_         218 G-------GTTTWHDYAALVFD  232 (298)
T ss_dssp             B-------SCEEHHHHHHHHHH
T ss_pred             C-------CceecHHHHHHHHh
Confidence            4       77899999887653

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.89  E-value=4.7e-24  Score=184.77  Aligned_cols=218  Identities=14%  Similarity=0.114  Sum_probs=150.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC--CCCceEEEEccCCCcCCCchhh-------
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      ++.+|+||||||+++||+++++.|+++|++|++.+|+. +..+...+..  .+.++..+.+|++|+++++ +.       
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~-~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVV-ALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHH-HHHHHHHHH
Confidence            57899999999999999999999999999999876654 3334332222  1557889999999988887 43       


Q ss_pred             hcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEecccc-ccCCCCCccchhhhHH
Q 019935          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGV-TKFNELPWSIMNLFGV  221 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~-~~~~~~~~~~~~~~~~  221 (333)
                      +.++|++|||||......   ...+..+..+++|+.+.+++++++ +.  .-+++++++|... ..    +......|+.
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~----~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----GIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----SCCSCHHHHH
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc----CCCCchhHHH
Confidence            447999999999864221   112223346788999999999865 21  1246777766544 32    3444556776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCC-------------CcchHHHHHHhhcccceeecCCCCcccccc
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYT-------------SYDLNTLLKATAGERRAVLMGQGDKLIGEV  283 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  283 (333)
                      +|.     .+.+..++...||++++|+||.+ ..+..             ......+.....         +..+...+.
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~pl~R~g  227 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGV-KTDMFDENSWHYAPGGYKGMPQEKIDEGLA---------NMNPLKRIG  227 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-SSHHHHHHGGGTSTTCCTTCCHHHHHHHHH---------HTSTTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCc-cChhhhhhhhhhhhhhcccCCHHHHHHHHH---------hCCCCCCCc
Confidence            663     45666777788999999999955 33210             000111111111         123455789


Q ss_pred             cHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          284 SRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       284 ~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .++|+|+++++++++..  ..|+.+.++||
T Consensus       228 ~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         228 YPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence            99999999999999866  56999999997

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.89  E-value=1.9e-23  Score=182.27  Aligned_cols=227  Identities=13%  Similarity=0.093  Sum_probs=152.6

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc-hhhhhhccC--CCCceEEEEccCCCcCCCch------h
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDP------A  147 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~------~  147 (333)
                      ..++++|++|||||+++||+++++.|+++|++|++++|+.+ ..+.+.+..  .+..+.++.+|++|++++.+      +
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999988743 333332211  15678899999999988873      2


Q ss_pred             hhcCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhcC-C--CCCeEEEEeccccccCCCCCccchhhhHH
Q 019935          148 IFEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S--SLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (333)
Q Consensus       148 ~~~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~-~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~  221 (333)
                      .+.++|++|||+|......   ...+.....+++|+.+++++++++. .  .-+++++++|.....   .+......|+.
T Consensus        93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~---~~~~~~~~Y~a  169 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA---KAVPKHAVYSG  169 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC---SSCSSCHHHHH
T ss_pred             HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc---ccccchhhHHH
Confidence            3458999999999765321   1122233467889999999998662 1  235788888775432   13334455665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcc-cce-------eecCCCCcccccccHHHH
Q 019935          222 LKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGE-RRA-------VLMGQGDKLIGEVSRIVV  288 (333)
Q Consensus       222 ~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~i~v~Dv  288 (333)
                      +|+     .+.+..++..+||++++|+||.+ .++.    +..+....... ...       .......+...+..++|+
T Consensus       170 sKaal~~ltk~lA~e~~~~gIrVN~I~PG~v-~T~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peev  244 (272)
T d1g0oa_         170 SKGAIETFARCMAIDMADKKITVNVVAPGGI-KTDM----YHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI  244 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCB-SSHH----HHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHhchhCeEEEEEccCCc-CChH----HHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHH
Confidence            553     45666777789999999999955 3321    11100000000 000       000112344578999999


Q ss_pred             HHHHHHhccCcc--cCCcEEEecCC
Q 019935          289 AEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       289 a~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      |+++++++++..  ..|+++.++||
T Consensus       245 A~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         245 ARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCccCceEeECCC
Confidence            999999998755  46999999997

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.1e-24  Score=182.39  Aligned_cols=197  Identities=14%  Similarity=0.095  Sum_probs=144.8

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhh-------
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      .++.||+||||||+++||++++++|+++|++|++++|++++.+++..+.  .+.++..+.+|++|+++++ ++       
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~-~~~~~i~~~   81 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIY-SSAKKVKAE   81 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHH-HHHHHHHHH
Confidence            3578999999999999999999999999999999999998877654432  2567899999999999887 43       


Q ss_pred             hcCCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          149 FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                      +.++|++|||||.......   ..+..++.+++|+.|++++++++     +++-++||++||..+..    +......|+
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~  157 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----SVPFLLAYC  157 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----CHHHHHHHH
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC----CCCCcHHHH
Confidence            4479999999998753221   11223357889999999999855     34567999999999875    566667787


Q ss_pred             HHHHH-----HHHHHHHHh---cCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          221 VLKYK-----KMGEDFVQK---SGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       221 ~~k~k-----~~~e~~l~~---~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .+|+.     +.+...+..   .|+++++|+||.+ ..+....                   .......++.++|+|+.+
T Consensus       158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v-~T~~~~~-------------------~~~~~~~~~~pe~va~~i  217 (244)
T d1yb1a_         158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKN-------------------PSTSLGPTLEPEEVVNRL  217 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH-HHCSTTC-------------------THHHHCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC-CChhhhC-------------------cCccccCCCCHHHHHHHH
Confidence            77642     333444444   4899999999954 3332110                   001223456799999999


Q ss_pred             HHhccCc
Q 019935          293 IQALDIE  299 (333)
Q Consensus       293 ~~~l~~~  299 (333)
                      +..+..+
T Consensus       218 ~~~~~~~  224 (244)
T d1yb1a_         218 MHGILTE  224 (244)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhcC
Confidence            9988764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=1.3e-22  Score=179.13  Aligned_cols=230  Identities=14%  Similarity=0.097  Sum_probs=142.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc--hhhhhhccCCCCceEEE-EccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE--KATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~--~~~~~~~~~~~~~~~~v-~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ||||||+||||++|+++|+++|+ +|+++++-..  +......   ....... ..|+.+..... ..+..+++|+|.|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD---LNIADYMDKEDFLIQIMAG-EEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT---SCCSEEEEHHHHHHHHHTT-CCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc---cchhhhccchHHHHHHhhh-hcccchhhhhhhcc
Confidence            89999999999999999999995 7888864222  1222211   1111111 11222211122 23457899999998


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCC-------CCccchhhhHHHHHH--HHHHH
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYK--KMGED  230 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~-------~~~~~~~~~~~~k~k--~~~e~  230 (333)
                      .....   ........+.|+.++.+++++++. +++ +++.||..++....       .+..+.+.|+.+|..  ..++.
T Consensus        78 ~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          78 CSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             CCCTT---CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccc---cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchhhhhccc
Confidence            65422   223334567789999999998755 664 56666665554221       223456678866542  33445


Q ss_pred             HHHhcCCCEEEEEcccccCCCCCCcc------hHHHHHHhhcccc-eeecCCCCcccccccHHHHHHHHHHhccCcccCC
Q 019935          231 FVQKSGLPFTIIRAGRLTDGPYTSYD------LNTLLKATAGERR-AVLMGQGDKLIGEVSRIVVAEACIQALDIEFTEG  303 (333)
Q Consensus       231 ~l~~~gi~~~~vrpg~~~~g~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~g  303 (333)
                      +.++.+++++++||+.+ |||.....      ...+...+..+.. ....+++...++|+|++|++.++..++.++.  .
T Consensus       154 ~~~~~~~~~~~~r~~~v-yGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~--~  230 (307)
T d1eq2a_         154 ILPEANSQIVGFRYFNV-YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV--S  230 (307)
T ss_dssp             HGGGCSSCEEEEEECEE-ESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--C
T ss_pred             cccccccccccccceeE-eeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--c
Confidence            55667999999999955 88875322      2334444444433 3345778888999999999999999998753  4


Q ss_pred             cEEEecCCCCCCCCCCcccHHHHHHHHhc
Q 019935          304 EIYEINSVEGEGPGSDPQKWRELFKAAKA  332 (333)
Q Consensus       304 ~~~~v~~g~~~~~~~~~~s~~e~~~~i~~  332 (333)
                      ..|++++|       ...+++|+++++.+
T Consensus       231 ~~~~~~~~-------~~~si~~i~~~i~~  252 (307)
T d1eq2a_         231 GIFNLGTG-------RAESFQAVADATLA  252 (307)
T ss_dssp             EEEEESCS-------CCBCHHHHHHHC--
T ss_pred             cccccccc-------cchhHHHHHHHHHH
Confidence            68999986       67899999998754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=8.6e-22  Score=169.36  Aligned_cols=215  Identities=14%  Similarity=0.130  Sum_probs=149.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhcCC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGV  152 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~~~  152 (333)
                      ++++|++|||||+++||++++++|+++|++|++++|+.++.+...++. .........|+.+.+.++.      ..+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCCcccccccccccccccccccccccccccc
Confidence            578999999999999999999999999999999999988877665444 5677888899988776652      123468


Q ss_pred             cEEEEcCCCCCCCCC---------CCCCCCCCcchhHHHHHHHHHhc-C----------CCCCeEEEEeccccccCCCCC
Q 019935          153 THVICCTGTTAFPSR---------RWDGDNTPEKVDWEGVRNLVSAL-P----------SSLKRIVLVSSVGVTKFNELP  212 (333)
Q Consensus       153 d~vi~~a~~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~a~-~----------~~~~~~v~~SS~~~~~~~~~~  212 (333)
                      |.++++++.......         ..+.....+++|+.+++++++++ +          .+.++||++||..++.    +
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----~  156 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----G  156 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----C
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc----C
Confidence            999999876542110         11122345788999999999865 1          1335899999999875    4


Q ss_pred             ccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCc-ccccccHH
Q 019935          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDK-LIGEVSRI  286 (333)
Q Consensus       213 ~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~  286 (333)
                      ......|+.+|+     .+.+..++..+||++++|.||.+ ..+........+.....         ...+ ...+..++
T Consensus       157 ~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i-~T~~~~~~~~~~~~~~~---------~~~pl~~R~g~pe  226 (248)
T d2o23a1         157 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLA---------SQVPFPSRLGDPA  226 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CCC----------CHHH---------HTCSSSCSCBCHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCce-ecchhhcCCHHHHHHHH---------hcCCCCCCCcCHH
Confidence            455566776664     45666777888999999999954 55543221111111110         1111 14578999


Q ss_pred             HHHHHHHHhccCcccCCcEEEe
Q 019935          287 VVAEACIQALDIEFTEGEIYEI  308 (333)
Q Consensus       287 Dva~a~~~~l~~~~~~g~~~~v  308 (333)
                      |+|++++++++.+-..|++++|
T Consensus       227 evA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         227 EYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEE
T ss_pred             HHHHHHHHHHhCCCCCceEeEC
Confidence            9999999999865566888775

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=7.5e-23  Score=177.17  Aligned_cols=219  Identities=13%  Similarity=0.079  Sum_probs=145.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchhhhhhccC----CCCceEEEEccCCCcCCCchhhh--
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIF--  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~D~~d~~~~~~~~~--  149 (333)
                      .+.+|+++||||+++||++++++|++   +|++|++++|+.++.+++.+++    ...++..+.+|++|+++++ +++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~-~l~~~   81 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ-RLLSA   81 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH-HHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH-HHHHH
Confidence            46789999999999999999999986   6999999999998876654322    2457888999999998877 443  


Q ss_pred             ---------cCCcEEEEcCCCCCCCC------CCCCCCCCCcchhHHHHHHHHHhc----CC-C--CCeEEEEecccccc
Q 019935          150 ---------EGVTHVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVTK  207 (333)
Q Consensus       150 ---------~~~d~vi~~a~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~----~~-~--~~~~v~~SS~~~~~  207 (333)
                               ..+|++|||||......      .+++.....+++|+.+++++++++    +. +  .++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                     24689999999754211      111223346789999999999865    22 2  35899999998865


Q ss_pred             CCCCCccchhhhHHHHHH-----HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCccccc
Q 019935          208 FNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGE  282 (333)
Q Consensus       208 ~~~~~~~~~~~~~~~k~k-----~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (333)
                          +......|+.+|+-     +.+..  ...|+++++|.||.+ .++..    ...............+........+
T Consensus       162 ----~~~~~~~Y~asKaal~~lt~~la~--e~~gIrVn~v~PG~i-~T~~~----~~~~~~~~~~~~~~~~~~~~~~~r~  230 (259)
T d1oaaa_         162 ----PYKGWGLYCAGKAARDMLYQVLAA--EEPSVRVLSYAPGPL-DNDMQ----QLARETSKDPELRSKLQKLKSDGAL  230 (259)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHH--HCTTEEEEEEECCSB-SSHHH----HHHHHHCSCHHHHHHHHHHHHTTCS
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHh--CCCCCEEEEEEcCCC-CCHHH----HHhhhcCCCHHHHHHHHhcCCCCCC
Confidence                55556677766642     22222  256999999999955 33321    1110000000000000001122356


Q ss_pred             ccHHHHHHHHHHhccCcc-cCCcEEEec
Q 019935          283 VSRIVVAEACIQALDIEF-TEGEIYEIN  309 (333)
Q Consensus       283 i~v~Dva~a~~~~l~~~~-~~g~~~~v~  309 (333)
                      ..++|+|+++++++++.. ..|+.+++.
T Consensus       231 ~~p~evA~~i~~ll~~~s~~TG~~idv~  258 (259)
T d1oaaa_         231 VDCGTSAQKLLGLLQKDTFQSGAHVDFY  258 (259)
T ss_dssp             BCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred             CCHHHHHHHHHHHhhhccCCCCCeEEec
Confidence            889999999999997644 447777653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.85  E-value=5.5e-21  Score=164.25  Aligned_cols=167  Identities=17%  Similarity=0.095  Sum_probs=120.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhh---------
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI---------  148 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~---------  148 (333)
                      ||+||||||+++||++++++|++   +|++|++.+|++++.+.+.+.. ...++.++.+|++|+++++ ++         
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~-~~~~~i~~~~~   80 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYD-KLVADIEGVTK   80 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHH-HHHHHHHHHHG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHH-HHHhhhHHHhh
Confidence            68999999999999999999974   6899999999988776553211 1568999999999999887 33         


Q ss_pred             hcCCcEEEEcCCCCCCCCC----CCCCCCCCcchhHHHHHHHHHhc----C------------CCCCeEEEEeccccccC
Q 019935          149 FEGVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----P------------SSLKRIVLVSSVGVTKF  208 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~----~------------~~~~~~v~~SS~~~~~~  208 (333)
                      +.++|++|||||.......    ..+.....+++|+.|++.+++++    +            .+.+++|++||....-.
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            2468999999997543211    11123346788999999998865    1            13468999999876431


Q ss_pred             CCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCC
Q 019935          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGP  251 (333)
Q Consensus       209 ~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~  251 (333)
                      .. +......|+.+|+     .+.+...+++.|++++.|.||.+ ..+
T Consensus       161 ~~-~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v-~T~  206 (248)
T d1snya_         161 GN-TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWV-KTD  206 (248)
T ss_dssp             TC-CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSB-CST
T ss_pred             CC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcc-cCC
Confidence            11 2333445666653     34555667788999999999955 444

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.84  E-value=6.1e-21  Score=164.15  Aligned_cols=203  Identities=17%  Similarity=0.088  Sum_probs=136.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-------c-
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-------E-  150 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-------~-  150 (333)
                      +.|+||||||+++||++++++|+++|+  +|++.+|+.++.+++.+.. ..+++++.+|++|+++++ +++       . 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~-~~~~~~~~~Dvs~~~~v~-~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTVTCDKSLD-TFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCTTCHHHHH-HHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEEecCCHHHHH-HHHHHHHHHhCC
Confidence            348999999999999999999999995  6888899998887766543 568999999999998887 332       2 


Q ss_pred             -CCcEEEEcCCCCCCCC----CCCCCCCCCcchhHHHHHHHHHhcC----C------------CCCeEEEEeccccccCC
Q 019935          151 -GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP----S------------SLKRIVLVSSVGVTKFN  209 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~------------~~~~~v~~SS~~~~~~~  209 (333)
                       ++|+||||||......    ...+.....+++|+.|++++++++.    .            ...+++++|+.......
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence             4899999999754211    1111233468899999999998651    0            12478888877654321


Q ss_pred             ---CCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccc
Q 019935          210 ---ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIG  281 (333)
Q Consensus       210 ---~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (333)
                         ..+..+...|+.+|+     .+.+...+++.|+++++|.||.+ ..+...                        ...
T Consensus       160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v-~T~m~~------------------------~~~  214 (250)
T d1yo6a1         160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV-QTNLGG------------------------KNA  214 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC-CCCCCC------------------------CCC
Confidence               122333445666664     34555667788999999999955 322110                        012


Q ss_pred             cccHHHHHHHHHHhccCcc--cCCcEEEecC
Q 019935          282 EVSRIVVAEACIQALDIEF--TEGEIYEINS  310 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~  310 (333)
                      .+++++.++.++..+....  ..|+.|+..+
T Consensus       215 ~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         215 ALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             ----HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            3568899999998887643  4477666543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.6e-22  Score=174.32  Aligned_cols=213  Identities=19%  Similarity=0.193  Sum_probs=137.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE---EcCcchhhhh---hcc--CCCCceEEEEccCCCcCCCchhhh----
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL---LRDPEKATTL---FGK--QDEETLQVCKGDTRNPKDLDPAIF----  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~---~R~~~~~~~~---~~~--~~~~~~~~v~~D~~d~~~~~~~~~----  149 (333)
                      .|.||||||+++||+++++.|+++|++|+.+   .|+.+....+   ...  ....++..+.+|++|+++++ +++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~-~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVA-AARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHH-HHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhh-hhhhhcc
Confidence            3678999999999999999999999876554   4444333222   111  12567899999999998887 443    


Q ss_pred             -cCCcEEEEcCCCCCCCC---CCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCCCCCccchhhhH
Q 019935          150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (333)
Q Consensus       150 -~~~d~vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  220 (333)
                       ..+|++|||||......   ...+.....+++|+.|++++++++     +++-++||++||+++..    +.+....|+
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~----~~~~~~~Y~  156 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM----GLPFNDVYC  156 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----CCTTCHHHH
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC----CCCCchHHH
Confidence             36899999999865322   112233446789999999999965     23668999999998865    455556677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhccc-----ce-ee--cCCCCcccccccHHH
Q 019935          221 VLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGER-----RA-VL--MGQGDKLIGEVSRIV  287 (333)
Q Consensus       221 ~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~-----~~-~~--~~~~~~~~~~i~v~D  287 (333)
                      .+|+     .+.+..++..+|+++++|+||.+ ..+.....+...........     .. ..  ............++|
T Consensus       157 asKaal~~l~~~la~El~~~gIrVn~V~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pee  235 (285)
T d1jtva_         157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEE  235 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB-CC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCC-CChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHH
Confidence            6664     45556777888999999999955 44432211100000000000     00 00  000011124678999


Q ss_pred             HHHHHHHhccCcc
Q 019935          288 VAEACIQALDIEF  300 (333)
Q Consensus       288 va~a~~~~l~~~~  300 (333)
                      +|+++++++..+.
T Consensus       236 VA~~v~~~~~~~~  248 (285)
T d1jtva_         236 VAEVFLTALRAPK  248 (285)
T ss_dssp             HHHHHHHHHHCSS
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999998754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=9.1e-21  Score=161.99  Aligned_cols=207  Identities=17%  Similarity=0.131  Sum_probs=139.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh------cCCcEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF------EGVTHV  155 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~------~~~d~v  155 (333)
                      .|++|||||+++||++++++|+++|++|++++|+++.          .+...+++|+++..... ...      ...+.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~----------~~~~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG----------EDLIYVEGDVTREEDVR-RAVARAQEEAPLFAV   69 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS----------SSSEEEECCTTCHHHHH-HHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc----------ccceEeeccccchhhhH-HHHHhhhccccccch
Confidence            3799999999999999999999999999999998643          34566789998866555 222      245667


Q ss_pred             EEcCCCCCCCCC-------CCCCCCCCcchhHHHHHHHHHhc-----------CCCCCeEEEEeccccccCCCCCccchh
Q 019935          156 ICCTGTTAFPSR-------RWDGDNTPEKVDWEGVRNLVSAL-----------PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (333)
Q Consensus       156 i~~a~~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~-----------~~~~~~~v~~SS~~~~~~~~~~~~~~~  217 (333)
                      +++++.......       ..+.....+++|+.+...+++.+           +.+..+||++||..+..    +.....
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----~~~~~~  145 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE----GQIGQA  145 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----CCTTCH
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc----CCCCch
Confidence            777665432110       01111235677888887777643           11346899999998865    444556


Q ss_pred             hhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHH
Q 019935          218 LFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEAC  292 (333)
Q Consensus       218 ~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  292 (333)
                      .|+.+|+     .+.+..++..+||++++|.||.+ ..+...............        .......+..++|+|+++
T Consensus       146 ~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i-~T~~~~~~~~~~~~~~~~--------~~~~~~R~g~pedvA~~v  216 (241)
T d1uaya_         146 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAA--------QVPFPPRLGRPEEYAALV  216 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSC-SSHHHHTSCHHHHHHHHT--------TCCSSCSCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcc-cccccchhhhhHHHHHHh--------cCCCCCCCcCHHHHHHHH
Confidence            6776664     45666777889999999999955 443321111211111111        111124678899999999


Q ss_pred             HHhccCcccCCcEEEecCCC
Q 019935          293 IQALDIEFTEGEIYEINSVE  312 (333)
Q Consensus       293 ~~~l~~~~~~g~~~~v~~g~  312 (333)
                      +++++..-..|+++.++||-
T Consensus       217 ~fL~s~~~iTG~~i~VDGG~  236 (241)
T d1uaya_         217 LHILENPMLNGEVVRLDGAL  236 (241)
T ss_dssp             HHHHHCTTCCSCEEEESTTC
T ss_pred             HHHHhCCCCCCCEEEECCcc
Confidence            99998755679999999873

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1e-20  Score=163.43  Aligned_cols=220  Identities=12%  Similarity=0.069  Sum_probs=147.1

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCch------hhh
Q 019935           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDP------AIF  149 (333)
Q Consensus        79 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~------~~~  149 (333)
                      .+++|+||||||+|  +||+++++.|+++|++|++.+|+++..+...+.. .......+..|+.+..+...      ..+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            36789999999999  8999999999999999999999865433322111 14456777889888766552      123


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCC--------CCCCcchhHHHHHHHHHhcCC---CCCeEEEEeccccccCCCCCccchhh
Q 019935          150 EGVTHVICCTGTTAFPSRRWDG--------DNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNL  218 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  218 (333)
                      ...|++|||++...........        ....+.+|+.+...+++++..   .-+.+|++||.+...    +.+....
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----~~~~~~~  157 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNYNV  157 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTTTH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc----CCCCcHH
Confidence            4689999999876422111000        111234566677777775532   235789999987754    3444456


Q ss_pred             hHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHHHH
Q 019935          219 FGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEA  291 (333)
Q Consensus       219 ~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  291 (333)
                      |+.+|+     .+.+..++..+||++++|+||.+ ..+......  .........         ..+...+..++|+|++
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~~~~~~~~~~---------~~pl~R~~~peeia~~  227 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPI-RTLAASGIKDFRKMLAHCEA---------VTPIRRTVTIEDVGNS  227 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCC-CCTTGGGSTTHHHHHHHHHH---------HSTTSSCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeeccccccc-ccccccccchhhhHHHHHHh---------CCCCCCCcCHHHHHHH
Confidence            776664     45666777788999999999954 666543221  111111111         1234468899999999


Q ss_pred             HHHhccCcc--cCCcEEEecCCC
Q 019935          292 CIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       292 ~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++.+..  ..|+++.++||-
T Consensus       228 v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         228 AAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCchhcCccCceEEECcCH
Confidence            999998754  569999999983

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=4.8e-19  Score=154.92  Aligned_cols=213  Identities=9%  Similarity=0.004  Sum_probs=136.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc-chhhhhhccC---CCCceEEEEcc-----------------CCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ---DEETLQVCKGD-----------------TRNP  141 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~-~~~~~~~~~~---~~~~~~~v~~D-----------------~~d~  141 (333)
                      .++|||||+++||+++++.|+++|++|++.+|+. +..+.+.+..   .......+++|                 ++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5899999999999999999999999999987754 3333322211   13445555555                 4444


Q ss_pred             CCCchhh-------hcCCcEEEEcCCCCCCCCC------CCCCCC-----------CCcchhHHHHHHHHHhc-------
Q 019935          142 KDLDPAI-------FEGVTHVICCTGTTAFPSR------RWDGDN-----------TPEKVDWEGVRNLVSAL-------  190 (333)
Q Consensus       142 ~~~~~~~-------~~~~d~vi~~a~~~~~~~~------~~~~~~-----------~~~~~n~~~~~~l~~a~-------  190 (333)
                      ++++ ++       +.++|++|||||.......      .|+...           .++.+|+.+.+.+.+++       
T Consensus        83 ~~v~-~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCA-ELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHH-HHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHH-HHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            4444 32       4589999999998642110      111100           13567888888888753       


Q ss_pred             ---CC-CCCeEEEEeccccccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHH
Q 019935          191 ---PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLL  261 (333)
Q Consensus       191 ---~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~  261 (333)
                         +. +..++|+++|.....    +......|+.+|.     .+.+..++..+||++++|.||.. ....  ...+...
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t-~~~~--~~~~~~~  234 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS-VLVD--DMPPAVW  234 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-CCGG--GSCHHHH
T ss_pred             HHHhcCCCCcccccccccccC----CccceeeeccccccchhhhHHHHHHhCCccccccccccccc-cccc--cCCHHHH
Confidence               11 335788888877654    4445556776664     46666778889999999999942 2111  1111222


Q ss_pred             HHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          262 KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      .......        .....+..++|+|+++++++++..  ..|+++.++||
T Consensus       235 ~~~~~~~--------pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         235 EGHRSKV--------PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             HHHHTTC--------TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhcC--------CCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence            2111110        112467899999999999998765  45999999997

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=1.4e-20  Score=160.36  Aligned_cols=198  Identities=14%  Similarity=0.082  Sum_probs=130.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hhhc--CC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFE--GV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~~~--~~  152 (333)
                      ++|+||||||+|+||+++++.|+++|++|++++|+..+.        ......+..|..+.+..+.      +.+.  ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE--------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT--------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            468999999999999999999999999999999876432        2223344555554443331      1222  58


Q ss_pred             cEEEEcCCCCCCCCC----CCCCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       153 d~vi~~a~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                      |++|||||.......    ..+.....+++|+.+.+++++++ +.  .-++||++||.++..    +.+....|+.+|+-
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~~Y~asKaa  148 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----GTPGMIGYGMAKGA  148 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHHHHH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC----CccCCcccHHHHHH
Confidence            999999996431111    11222346788999999988865 21  236999999998865    44555667766642


Q ss_pred             -----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          226 -----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       226 -----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                           +.+..+++  +.|++++.|.||.+ +.+        +.+...         .......|+.++|+|+.+.+++..
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v-~T~--------~~~~~~---------~~~~~~~~~~pe~va~~~~~l~s~  210 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTL-DTP--------MNRKSM---------PEADFSSWTPLEFLVETFHDWITG  210 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCE-ECH--------HHHHHS---------TTSCGGGSEEHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccC-cCC--------cchhhC---------ccchhhcCCCHHHHHHHHHHHhCC
Confidence                 22222233  35899999999955 332        211111         112234688999999999999987


Q ss_pred             cc--cCCcEEEe
Q 019935          299 EF--TEGEIYEI  308 (333)
Q Consensus       299 ~~--~~g~~~~v  308 (333)
                      ..  ..|..+.+
T Consensus       211 ~~~~i~G~~i~v  222 (236)
T d1dhra_         211 NKRPNSGSLIQV  222 (236)
T ss_dssp             TTCCCTTCEEEE
T ss_pred             CccCCCCCeEEE
Confidence            54  44776665

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.8e-20  Score=162.24  Aligned_cols=191  Identities=16%  Similarity=0.166  Sum_probs=129.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcchhhhhhccCC--CCceEEEEccCCCcCCCch------hhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDP------AIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~D~~d~~~~~~------~~~~~~d  153 (333)
                      +++|||||+++||++++++|+++ |++|++.+|+.++.++..+++.  +.++.++.+|++|.+++++      +.+.++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            45699999999999999999986 8999999999988766543321  5678999999999988872      2245799


Q ss_pred             EEEEcCCCCCCCCCCC---CCCCCCcchhHHHHHHHHHhc-CC--CCCeEEEEeccccccC-------------------
Q 019935          154 HVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-PS--SLKRIVLVSSVGVTKF-------------------  208 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~l~~a~-~~--~~~~~v~~SS~~~~~~-------------------  208 (333)
                      ++|||||.........   ++....+++|+.|++++++++ ..  .-+|+|++||+.....                   
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~  163 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  163 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccch
Confidence            9999999864221111   112236788999999999966 21  2358999999765310                   


Q ss_pred             ------------------CCCCccchhhhHHHHHH-----HHHHHHHHh----cCCCEEEEEcccccCCCCCCcchHHHH
Q 019935          209 ------------------NELPWSIMNLFGVLKYK-----KMGEDFVQK----SGLPFTIIRAGRLTDGPYTSYDLNTLL  261 (333)
Q Consensus       209 ------------------~~~~~~~~~~~~~~k~k-----~~~e~~l~~----~gi~~~~vrpg~~~~g~~~~~~~~~~~  261 (333)
                                        ......+...|+.+|.-     +.+...+..    .|++++.|.||++ ..+...       
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v-~T~m~~-------  235 (275)
T d1wmaa1         164 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDMAG-------  235 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB-CSTTTC-------
T ss_pred             hhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc-cCCccc-------
Confidence                              00111223457666642     222333433    4899999999965 333211       


Q ss_pred             HHhhcccceeecCCCCcccccccHHHHHHHHHHhccC
Q 019935          262 KATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDI  298 (333)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  298 (333)
                                       ...+.+++|.|+.+++++..
T Consensus       236 -----------------~~~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         236 -----------------PKATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             -----------------TTCSBCHHHHTHHHHHHHSC
T ss_pred             -----------------CcccCCHHHHHHHHHHHHcC
Confidence                             01234689999999887643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=4.6e-20  Score=160.28  Aligned_cols=197  Identities=15%  Similarity=0.139  Sum_probs=138.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCch------hhhc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDP------AIFE  150 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~------~~~~  150 (333)
                      +++|++|||||+++||++++++|+++|++|++++|+.++.+++..+.   ....+..+.+|+.+.+....      ..+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999999998876654321   25567788899988766652      2345


Q ss_pred             CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHH
Q 019935          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (333)
Q Consensus       151 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k  223 (333)
                      .+|+++||||.......   +.+.....+++|+.+...+++++    +++-+++|++||.+++.    +.+....|+.+|
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~----~~p~~~~Y~asK  167 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----AYPMVAAYSASK  167 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS----CCTTCHHHHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC----CCCCchHHHHHH
Confidence            78999999997642211   11222345788999999988865    33447999999998865    566667788777


Q ss_pred             HH-----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhc
Q 019935          224 YK-----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQAL  296 (333)
Q Consensus       224 ~k-----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l  296 (333)
                      +-     +.+..++.  ..|++++.|.||.+ ..+        +.....         .+.......+++++|+.++..+
T Consensus       168 aal~~~~~~La~El~~~~~~I~V~~v~PG~v-~T~--------~~~~~~---------~~~~~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         168 FALDGFFSSIRKEYSVSRVNVSITLCVLGLI-DTE--------TAMKAV---------SGIVHMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCB-CCH--------HHHHHS---------CGGGGGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCCEEEEEEecCcC-CCc--------HHHHhc---------cCCccccCCCHHHHHHHHHHHh
Confidence            42     33333343  35799999999955 321        111111         1112234567899999999877


Q ss_pred             cC
Q 019935          297 DI  298 (333)
Q Consensus       297 ~~  298 (333)
                      ..
T Consensus       230 ~~  231 (269)
T d1xu9a_         230 AL  231 (269)
T ss_dssp             HT
T ss_pred             hc
Confidence            65

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.80  E-value=1e-19  Score=157.28  Aligned_cols=201  Identities=19%  Similarity=0.161  Sum_probs=135.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcch---hhhhhccC--CCCceEEEEccCCCcCCCchhhhc-----
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-----  150 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~-----  150 (333)
                      +.++|||||+|+||++++++|+++|+ +|+++.|+...   .+++..+.  .+.++.++.+|++|+++++ ++++     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~-~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVR-ELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHH-HHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHH-Hhhcccccc
Confidence            35899999999999999999999998 57888887433   22222111  1567899999999988877 5543     


Q ss_pred             -CCcEEEEcCCCCCCCCC---CCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEeccccccCCCCCccchhhhHHHHHH
Q 019935          151 -GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (333)
Q Consensus       151 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k  225 (333)
                       ++|.||||+|.......   ..+.....+++|+.+..++.++++. +.++||++||+.+..    +......|+.+|.-
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~----g~~~~~~YaAaka~  163 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF----GAPGLGGYAPGNAY  163 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----CCTTCTTTHHHHHH
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc----CCcccHHHHHHHHh
Confidence             57999999998653211   1112233567899999999998754 678999999998865    44445567766542


Q ss_pred             -HHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCccc
Q 019935          226 -KMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEFT  301 (333)
Q Consensus       226 -~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~  301 (333)
                       ..+.+.++..|+++++|.||.+. +....  -......         + . ..-...++++++++++..++..+..
T Consensus       164 l~~la~~~~~~Gi~v~~I~pg~~~-~~g~~--~~~~~~~---------~-~-~~G~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         164 LDGLAQQRRSDGLPATAVAWGTWA-GSGMA--EGPVADR---------F-R-RHGVIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECCBC------------------------C-T-TTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHhCCCCEEECCCCccc-CCccc--cchHHHH---------H-H-hcCCCCCCHHHHHHHHHHHHhCCCc
Confidence             23345667789999999999653 22110  0000000         0 0 0112467899999999999987653

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.79  E-value=1.7e-19  Score=157.07  Aligned_cols=217  Identities=14%  Similarity=0.101  Sum_probs=137.3

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhh---hhccCCCCceEEEEccCCCcCCCchhh-----
Q 019935           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (333)
Q Consensus        79 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~D~~d~~~~~~~~-----  148 (333)
                      .+++|++|||||+|  +||++++++|+++|++|++++|+++..+.   +...  .....+..+|++++++.+ +.     
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~-~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFK-SLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHH-HHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--CCceeEeeecccchhhHH-HHHHHHH
Confidence            36789999999887  89999999999999999999998643222   2222  456677899999988766 33     


Q ss_pred             --hcCCcEEEEcCCCCCCCCCC---CCCCCCCcchh----HHHHHHHHHhc-CC-C-CCeEEEEeccccccCCCCCccch
Q 019935          149 --FEGVTHVICCTGTTAFPSRR---WDGDNTPEKVD----WEGVRNLVSAL-PS-S-LKRIVLVSSVGVTKFNELPWSIM  216 (333)
Q Consensus       149 --~~~~d~vi~~a~~~~~~~~~---~~~~~~~~~~n----~~~~~~l~~a~-~~-~-~~~~v~~SS~~~~~~~~~~~~~~  216 (333)
                        +..+|++|||+|........   .......+..+    ......+.... +. + ...++++|+.+...    +....
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~----~~~~~  154 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK----YMAHY  154 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTC
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc----ccccc
Confidence              45899999999975421100   01111111111    22233333322 22 2 23466666666554    33333


Q ss_pred             hhhHHHH-----HHHHHHHHHHhcCCCEEEEEcccccCCCCCCcch--HHHHHHhhcccceeecCCCCcccccccHHHHH
Q 019935          217 NLFGVLK-----YKKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDL--NTLLKATAGERRAVLMGQGDKLIGEVSRIVVA  289 (333)
Q Consensus       217 ~~~~~~k-----~k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  289 (333)
                      ..|+.+|     ..+.+..++...||++++|.||.+ ..+......  ........         ...+...++.++|+|
T Consensus       155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v-~T~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedIA  224 (274)
T d2pd4a1         155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPI-RTLASSGIADFRMILKWNE---------INAPLRKNVSLEEVG  224 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-CCTTGGGSTTHHHHHHHHH---------HHSTTSSCCCHHHHH
T ss_pred             hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcc-cCccccccCchHHHHHHHh---------hhhhccCCcCHHHHH
Confidence            4455444     345566777889999999999955 555432211  11111111         012345788999999


Q ss_pred             HHHHHhccCcc--cCCcEEEecCCC
Q 019935          290 EACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       290 ~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +++++++++..  ..|+++.+++|-
T Consensus       225 ~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         225 NAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhChhhCCCcCceEEECCCh
Confidence            99999998755  569999999984

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.78  E-value=4.8e-19  Score=153.66  Aligned_cols=222  Identities=12%  Similarity=0.041  Sum_probs=136.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhh-------
Q 019935           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAI-------  148 (333)
Q Consensus        79 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~-------  148 (333)
                      .+++|++|||||+  .+||++++++|+++|++|++.+|+.++.. ++.+.. ..+...+++|++++++.+ .+       
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~-~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLA-SLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccc-cccchhhhc
Confidence            4678999999964  47999999999999999999999887653 343333 566788899999987655 22       


Q ss_pred             ---hcCCcEEEEcCCCCCCCCCCCCCCCC--------CcchhHHHHHHHHHhcCC--CCCeEEEEeccccccCCCCCccc
Q 019935          149 ---FEGVTHVICCTGTTAFPSRRWDGDNT--------PEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNELPWSI  215 (333)
Q Consensus       149 ---~~~~d~vi~~a~~~~~~~~~~~~~~~--------~~~~n~~~~~~l~~a~~~--~~~~~v~~SS~~~~~~~~~~~~~  215 (333)
                         +..+|+++||+|..........+..+        .+.+|........++...  ....+++++|.....    +.+.
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----~~p~  156 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----AMPA  156 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS----CCTT
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc----cCcc
Confidence               23579999999975311111111011        123344444555554422  223455555554433    3334


Q ss_pred             hhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCC--------CcchHHHHHHhhcccceeecCCCCc-ccc
Q 019935          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYT--------SYDLNTLLKATAGERRAVLMGQGDK-LIG  281 (333)
Q Consensus       216 ~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  281 (333)
                      ...|+.+|.     .+.+..++.+.||++++|.||.+ ..+..        .............     .+....+ .+.
T Consensus       157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~pl~rr  230 (268)
T d2h7ma1         157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPI-RTLAMSAIVGGALGEEAGAQIQLLEE-----GWDQRAPIGWN  230 (268)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-CCHHHHHHHTTTTCHHHHHHHHHHHH-----HHHHHCTTCCC
T ss_pred             cchhhccccchhhccccchhhhhccCCcceEEecCCC-CChhhhhhccchhhhhhccchHHHHH-----HHHhcCCCCCC
Confidence            456766664     35556677788999999999955 33211        0000000000000     0000111 234


Q ss_pred             cccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          282 EVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       282 ~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +..++|+|+++++++.+..  ..|+++.++||-
T Consensus       231 ~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         231 MKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             TTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             CCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            7789999999999997644  459999999973

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.78  E-value=8.8e-20  Score=155.33  Aligned_cols=197  Identities=13%  Similarity=0.075  Sum_probs=127.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch------hh--hcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AI--FEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~------~~--~~~~d~  154 (333)
                      .+||||||+|+||++++++|+++|++|++++|+++..        ......+.+|+.+.+....      ..  ..++|+
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ--------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT--------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc--------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            4799999999999999999999999999999987542        2223344566655443221      11  246899


Q ss_pred             EEEcCCCCCCC-CCCC---CCCCCCcchhHHHHHHHHHhc----CCCCCeEEEEeccccccCCCCCccchhhhHHHHHH-
Q 019935          155 VICCTGTTAFP-SRRW---DGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (333)
Q Consensus       155 vi~~a~~~~~~-~~~~---~~~~~~~~~n~~~~~~l~~a~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k-  225 (333)
                      ||||||..... ...+   +..+..+++|+.+++++++++    +.+ ++||++||.....    +......|+.+|+. 
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~~~~----~~~~~~~Y~asKaal  149 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAAAMG----PTPSMIGYGMAKAAV  149 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGGGS----CCTTBHHHHHHHHHH
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHHhcC----CcccccchHHHHHHH
Confidence            99999974321 1111   122235788999999888865    223 6999999998765    55555667766542 


Q ss_pred             ----HHHHHHHH--hcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCc
Q 019935          226 ----KMGEDFVQ--KSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIE  299 (333)
Q Consensus       226 ----~~~e~~l~--~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~  299 (333)
                          +.+..+++  ..+++++.|.||.+ ..+        +.+...        . ......|+.++|+++.++.++..+
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~-~T~--------~~~~~~--------~-~~~~~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTL-DTP--------MNRKWM--------P-NADHSSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCB-CCH--------HHHHHS--------T-TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcC-cCc--------chhhhC--------c-CCccccCCCHHHHHHHHHHHhcCc
Confidence                11222222  24789999999954 322        111111        1 123346889999999998766553


Q ss_pred             c---cCCcEEEecC
Q 019935          300 F---TEGEIYEINS  310 (333)
Q Consensus       300 ~---~~g~~~~v~~  310 (333)
                      .   ..|..+.+.+
T Consensus       212 ~~~~~tG~~i~v~~  225 (235)
T d1ooea_         212 SSRPSSGALLKITT  225 (235)
T ss_dssp             GGCCCTTCEEEEEE
T ss_pred             cccCCCceEEEEEe
Confidence            3   4577777744

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.77  E-value=7.7e-18  Score=145.68  Aligned_cols=213  Identities=14%  Similarity=0.134  Sum_probs=131.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhhhcc---CCCCceEEEEccCCCcCCCch----------hh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGK---QDEETLQVCKGDTRNPKDLDP----------AI  148 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~~~---~~~~~~~~v~~D~~d~~~~~~----------~~  148 (333)
                      .++|||||+++||++++++|+++|++|++++|+.++. +.+.++   ........+..|+.+....++          +.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999986543 222211   114567777777766544331          23


Q ss_pred             hcCCcEEEEcCCCCCCCC------CCCCCCCCCc--------chhHHHHHHHHHhc----C------CCCCeEEEEeccc
Q 019935          149 FEGVTHVICCTGTTAFPS------RRWDGDNTPE--------KVDWEGVRNLVSAL----P------SSLKRIVLVSSVG  204 (333)
Q Consensus       149 ~~~~d~vi~~a~~~~~~~------~~~~~~~~~~--------~~n~~~~~~l~~a~----~------~~~~~~v~~SS~~  204 (333)
                      +.++|++|||||......      ..+.......        ..|+.+........    .      .....++++|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            458999999999764211      0011111111        12233333333221    1      1223677777776


Q ss_pred             cccCCCCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccceeecCCCCcc
Q 019935          205 VTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRAVLMGQGDKL  279 (333)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (333)
                      ...    +.+....|+.+|.     .+.+..++.++||+++.|.||.+ ..+...  ...+.......         .+.
T Consensus       162 ~~~----~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i-~t~~~~--~~~~~~~~~~~---------~pl  225 (266)
T d1mxha_         162 TDL----PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLS-LLPPAM--PQETQEEYRRK---------VPL  225 (266)
T ss_dssp             GGS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB-SCCSSS--CHHHHHHHHTT---------CTT
T ss_pred             ccc----cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcE-eccccC--CHHHHHHHHhc---------CCC
Confidence            654    3444555655553     45666777889999999999954 544322  12222222111         112


Q ss_pred             -cccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          280 -IGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       280 -~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                       +.+.+++|+|+++++++++..  ..|+++.++||
T Consensus       226 ~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG  260 (266)
T d1mxha_         226 GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  260 (266)
T ss_dssp             TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence             345789999999999999865  56999999997

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.76  E-value=2.2e-18  Score=151.64  Aligned_cols=222  Identities=11%  Similarity=0.005  Sum_probs=134.4

Q ss_pred             CCCCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEEcCcchhhhh-------------hccCCCC---ceEEEEccC-
Q 019935           78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTL-------------FGKQDEE---TLQVCKGDT-  138 (333)
Q Consensus        78 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~---~~~~v~~D~-  138 (333)
                      .++++|++|||||+|  +||+++++.|+++|++|++.+|++......             .......   ++..+..++ 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            468899999999887  999999999999999999999865321110             0000011   112222222 


Q ss_pred             -----------------CCcCCCch------hhhcCCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhc
Q 019935          139 -----------------RNPKDLDP------AIFEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       139 -----------------~d~~~~~~------~~~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                                       .+...+++      +.+.++|++|||||......     ...++....+++|+.+.+++++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             22222221      23458999999999753111     111223346778999999999966


Q ss_pred             CC---CCCeEEEEeccccccCCCCCccchhhhHHHHH-----HHHHHHHH-HhcCCCEEEEEcccccCCCCCCcc--hHH
Q 019935          191 PS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFV-QKSGLPFTIIRAGRLTDGPYTSYD--LNT  259 (333)
Q Consensus       191 ~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~-----k~~~e~~l-~~~gi~~~~vrpg~~~~g~~~~~~--~~~  259 (333)
                      ..   .-++++.+++.+....   .......|..+|.     .+.+...+ .++||++++|+||.+ ..+.....  .+.
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i-~T~~~~~~~~~~~  239 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERI---IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL-GSRAAKAIGFIDT  239 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSC---CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-BCCCSSCCSHHHH
T ss_pred             HHHhhcCCcceeeeehhhccc---ccccccceecccccccccccccchhccccceEEecccccccc-cchhhhhccCCHH
Confidence            32   1235666666654331   1223334555553     22223333 568999999999955 56554321  222


Q ss_pred             HHHHhhcccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEEEecCCC
Q 019935          260 LLKATAGERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIYEINSVE  312 (333)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g~  312 (333)
                      +.+....         ..+...+..++|+|+++++++++..  ..|+++.++||-
T Consensus       240 ~~~~~~~---------~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         240 MIEYSYN---------NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHH---------HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHh---------CCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            2222211         1234467899999999999998755  459999999973

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.74  E-value=1.3e-17  Score=143.56  Aligned_cols=203  Identities=13%  Similarity=0.107  Sum_probs=121.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch-------hhhcCCcE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP-------AIFEGVTH  154 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~-------~~~~~~d~  154 (333)
                      ||+||||||+++||++++++|+++|++|++++|+.++.               ..|+.+.+..+.       +..+.+|+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~---------------~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV---------------IADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE---------------ECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH---------------HHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            58999999999999999999999999999999975332               235554433221       12246899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-----CCCCCeEEEEeccccccCC--------------------
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN--------------------  209 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-----~~~~~~~v~~SS~~~~~~~--------------------  209 (333)
                      ++||||....    .+.......+|..+...+.++.     +.......++++.......                    
T Consensus        66 lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s  141 (257)
T d1fjha_          66 LVLCAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEECCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEcCCCCCc----HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence            9999987531    1111223456777776666543     2234455555554332100                    


Q ss_pred             ----CCCccchhhhHHHHH-----HHHHHHHHHhcCCCEEEEEcccccCCCCCCcchHHHHHHhhcccce-eecCCCCcc
Q 019935          210 ----ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIIRAGRLTDGPYTSYDLNTLLKATAGERRA-VLMGQGDKL  279 (333)
Q Consensus       210 ----~~~~~~~~~~~~~k~-----k~~~e~~l~~~gi~~~~vrpg~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  279 (333)
                          .........|+.+|.     .+.+..++..+||++++|.||.+ .++.....+..       .... .......+.
T Consensus       142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i-~T~~~~~~~~~-------~~~~~~~~~~~~Pl  213 (257)
T d1fjha_         142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGAT-ETPLLQAGLQD-------PRYGESIAKFVPPM  213 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------CCCST
T ss_pred             ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCc-CChhHHhhcCC-------HHHHHHHHhcCCCC
Confidence                001122334665553     34555667788999999999955 54432211110       0000 111112345


Q ss_pred             cccccHHHHHHHHHHhccCcc--cCCcEEEecCC
Q 019935          280 IGEVSRIVVAEACIQALDIEF--TEGEIYEINSV  311 (333)
Q Consensus       280 ~~~i~v~Dva~a~~~~l~~~~--~~g~~~~v~~g  311 (333)
                      ..+..++|+|+++++++++..  ..|+++.++||
T Consensus       214 gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            678899999999999998765  55999999987

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=2.2e-17  Score=147.17  Aligned_cols=227  Identities=12%  Similarity=0.055  Sum_probs=136.0

Q ss_pred             CCeEEEEc--CCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh----ccC---------C-CCceEEEE----------
Q 019935           82 SKLVLVAG--GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF----GKQ---------D-EETLQVCK----------  135 (333)
Q Consensus        82 ~~~vlVtG--atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~---------~-~~~~~~v~----------  135 (333)
                      +|++||||  ++++||+++++.|+++|++|++..++........    +..         . ........          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            47899999  5579999999999999999999887654321110    000         0 11112222          


Q ss_pred             ----------ccCCCcCCCch------hhhcCCcEEEEcCCCCCCCC-----CCCCCCCCCcchhHHHHHHHHHhcCC--
Q 019935          136 ----------GDTRNPKDLDP------AIFEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALPS--  192 (333)
Q Consensus       136 ----------~D~~d~~~~~~------~~~~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~--  192 (333)
                                +|+.+.++++.      +.+.++|++|||||......     ..++.....+++|+.+.+.+++++..  
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      35556666552      23468999999998653211     11222334667888899999886532  


Q ss_pred             -CCCeEEEEeccccccCCCCCccc-hhhhHHHHH-----HHHHHHHHH-hcCCCEEEEEcccccCCCCCCc---------
Q 019935          193 -SLKRIVLVSSVGVTKFNELPWSI-MNLFGVLKY-----KKMGEDFVQ-KSGLPFTIIRAGRLTDGPYTSY---------  255 (333)
Q Consensus       193 -~~~~~v~~SS~~~~~~~~~~~~~-~~~~~~~k~-----k~~~e~~l~-~~gi~~~~vrpg~~~~g~~~~~---------  255 (333)
                       ..++||++||.+...    .++. ...|+.+|+     .+.+..+|. ++||++++|.||.+ ..+....         
T Consensus       162 ~~~GsIv~iss~~~~~----~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i-~T~a~~~i~g~~~~~~  236 (329)
T d1uh5a_         162 KPQSSIISLTYHASQK----VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL-KSRAATAINKLNNTYE  236 (329)
T ss_dssp             EEEEEEEEEECGGGTS----CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC-CCTTGGGCC-------
T ss_pred             ccccccccceeehhcc----cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc-cchhhhcccchhhhhh
Confidence             236899999988765    2222 334665553     355556664 57999999999954 3311000         


Q ss_pred             ---------------------chHHHHHHhh------cccceeecCCCCcccccccHHHHHHHHHHhccCcc--cCCcEE
Q 019935          256 ---------------------DLNTLLKATA------GERRAVLMGQGDKLIGEVSRIVVAEACIQALDIEF--TEGEIY  306 (333)
Q Consensus       256 ---------------------~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~  306 (333)
                                           ..........      .......+....+...+..++|+|.++++++++..  ..|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i  316 (329)
T d1uh5a_         237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTI  316 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeE
Confidence                                 0000000000      00000001111245678899999999999998754  459999


Q ss_pred             EecCCCC
Q 019935          307 EINSVEG  313 (333)
Q Consensus       307 ~v~~g~~  313 (333)
                      .++||-.
T Consensus       317 ~VDGG~~  323 (329)
T d1uh5a_         317 YVDNGLN  323 (329)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            9999843

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.41  E-value=3.8e-14  Score=115.99  Aligned_cols=85  Identities=19%  Similarity=0.184  Sum_probs=72.4

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      ..++++|+|+||||+|+||+++++.|+++|++|++++|+.++.+++.+... ..++.+..+|++|.++++ +.++++|+|
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~iDil   96 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRA-EAVKGAHFV   96 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHH-HHTTTCSEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHH-HHhcCcCee
Confidence            347889999999999999999999999999999999999988766543321 234567889999999999 899999999


Q ss_pred             EEcCCCC
Q 019935          156 ICCTGTT  162 (333)
Q Consensus       156 i~~a~~~  162 (333)
                      |||||..
T Consensus        97 in~Ag~g  103 (191)
T d1luaa1          97 FTAGAIG  103 (191)
T ss_dssp             EECCCTT
T ss_pred             eecCccc
Confidence            9999864

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.58  E-value=3.4e-08  Score=74.79  Aligned_cols=73  Identities=25%  Similarity=0.251  Sum_probs=62.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++++++..+.+.+.   .+..++.||.+|++.+++.-++.+|+++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~---~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh---hhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            58999997 9999999999999999999999999888776532   2678899999999998844467899998865

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.42  E-value=2.1e-07  Score=70.29  Aligned_cols=73  Identities=18%  Similarity=0.139  Sum_probs=62.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+++|.|+ |.+|+++++.|.+.|++|++++.+++..+.+.    ..+..++.+|.++++.+++.-+.++|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            46889986 99999999999999999999999999888776    445678889999999888444788999888764

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.39  E-value=2.9e-07  Score=72.86  Aligned_cols=75  Identities=25%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .|+|+|.|| |++|+++++.|+++|++|++++|+.++++.+...  .........+..+..... ..+...|.++.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~--~~~~~~~~~~~~~~~~~~-~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG--VQHSTPISLDVNDDAALD-AEVAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT--CTTEEEEECCTTCHHHHH-HHHTTSSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc--ccccccccccccchhhhH-hhhhccceeEeecc
Confidence            479999986 9999999999999999999999999999888754  233444455555555555 66778888887653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.26  E-value=1.2e-06  Score=66.83  Aligned_cols=112  Identities=20%  Similarity=0.142  Sum_probs=72.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      ||.|+||+|.+|++++..|+.+|  -++++++.++.+.+.+--.. .........-+ ...+.. +.++++|+||..||.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~-~~~~~~~~~~~-~~~~~~-~~~~~aDivVitag~   78 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH-IETRATVKGYL-GPEQLP-DCLKGCDVVVIPAGV   78 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT-SSSSCEEEEEE-SGGGHH-HHHTTCSEEEECCSC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhh-hhhhcCCCeEE-cCCChH-HHhCCCCEEEECCCc
Confidence            79999999999999999999888  47888988765544431110 11111111111 233444 567899999999997


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEEe
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVS  201 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~S  201 (333)
                      ..-   ......+.++.|......+++.+++ +.+.++.+-
T Consensus        79 ~~~---~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          79 PRK---PGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             CCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CCC---CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            432   2223355778899999999997754 545444433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.16  E-value=9e-07  Score=70.91  Aligned_cols=42  Identities=24%  Similarity=0.237  Sum_probs=38.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~  124 (333)
                      |||.|+||+|.+|++|++.|+++||+|++.+|++++.+++.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~   42 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            578999999999999999999999999999999988776654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.14  E-value=4.5e-06  Score=63.66  Aligned_cols=109  Identities=13%  Similarity=0.147  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhc-----cCCCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFG-----KQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~-----~~~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      ..+||.|.|+ |++|+.++..|+.+|  .+|+++++++++.+....     ...........+|.        +.+.++|
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--------~~~~~ad   74 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--------SDCKDAD   74 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--------GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--------HHhcccc
Confidence            3568999995 999999999999987  589999998865443210     00022233344442        2356899


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC-CCCCeEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~-~~~~~~v~~S  201 (333)
                      +||.+||....+   .....+....|..-...+++.++ .+.+.++.+-
T Consensus        75 ivvitag~~~~~---g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivv  120 (146)
T d1ez4a1          75 LVVITAGAPQKP---GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (146)
T ss_dssp             EEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEEEecccccCC---CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe
Confidence            999999875422   22334567788888888888664 3555555443

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.05  E-value=2.5e-06  Score=67.81  Aligned_cols=101  Identities=17%  Similarity=0.190  Sum_probs=69.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      ++.+|||+||+|.+|...++.....|++|++++|++++.+.+...    +...+ .|..+++..+ ..+     +++|+|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~----Ga~~v-i~~~~~~~~~-~~~~~~~~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFDAA-FNYKTVNSLE-EALKKASPDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEE-EETTSCSCHH-HHHHHHCTTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh----hhhhh-cccccccHHH-HHHHHhhcCCCcee
Confidence            467999999999999999999999999999999998877665532    22221 3444544444 222     379999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      |++.|..                   .....+++++.+ ++++.++....++
T Consensus       103 ~D~vG~~-------------------~~~~~~~~l~~~-G~~v~~G~~~~~~  134 (182)
T d1v3va2         103 FDNVGGE-------------------FLNTVLSQMKDF-GKIAICGAISVYN  134 (182)
T ss_dssp             EESSCHH-------------------HHHHHGGGEEEE-EEEEECCCGGGTT
T ss_pred             EEecCch-------------------hhhhhhhhccCC-CeEEeecceeecc
Confidence            9998731                   123444455443 5888877666654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.03  E-value=3.2e-05  Score=58.97  Aligned_cols=108  Identities=17%  Similarity=0.187  Sum_probs=69.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC------CCCceEEEEccCCCcCCCchhhhcC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~~~  151 (333)
                      ..++||.|+|+ |++|++++..|+.+|  .+++++++++++.+......      ......+...|      .  +.+++
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d------~--~~l~d   74 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD------Y--DDCRD   74 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC------G--GGTTT
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC------H--HHhcc
Confidence            34578999996 999999999999987  47999999887643321100      02223333332      1  34678


Q ss_pred             CcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCC-eEEE
Q 019935          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVL  199 (333)
Q Consensus       152 ~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~  199 (333)
                      +|+||.++|...-   ......+....|..-...+++.++. +-+ .|+.
T Consensus        75 aDvvvitag~~~~---~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~iv  121 (148)
T d1ldna1          75 ADLVVICAGANQK---PGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (148)
T ss_dssp             CSEEEECCSCCCC---TTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             ceeEEEecccccc---cCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence            9999999987542   2233345677788888888876533 333 4444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=4.5e-06  Score=66.19  Aligned_cols=99  Identities=21%  Similarity=0.240  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      ++.+|||+||+|.+|...++.+...|.+|+++++++++.+.+.+    .++..+ .|..+++-.+ ++.     .++|++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~----~Ga~~v-i~~~~~~~~~-~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVEYV-GDSRSVDFAD-EILELTDGYGVDVV   98 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCSEE-EETTCSTHHH-HHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc----cccccc-ccCCccCHHH-HHHHHhCCCCEEEE
Confidence            35699999999999999999998899999999998877765553    233222 3555543323 322     369999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      |++.|..                   ....++++++.+ +++|.++....
T Consensus        99 ~d~~g~~-------------------~~~~~~~~l~~~-G~~v~~G~~~~  128 (183)
T d1pqwa_          99 LNSLAGE-------------------AIQRGVQILAPG-GRFIELGKKDV  128 (183)
T ss_dssp             EECCCTH-------------------HHHHHHHTEEEE-EEEEECSCGGG
T ss_pred             Eecccch-------------------HHHHHHHHhcCC-CEEEEEccCCC
Confidence            9998731                   223455666553 68888765544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.97  E-value=9.3e-06  Score=61.74  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=67.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcch--hhhh----hc--cCCCCceEEEEccCCCcCCCchhhhcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEK--ATTL----FG--KQDEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~--~~~~----~~--~~~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      |||.|+||+|.+|.+++..|+.+|  .++.+++++++.  .+..    ..  .......+....-   .+..  +.++++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~---~~d~--~~l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES---DENL--RIIDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE---TTCG--GGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC---cchH--HHhccc
Confidence            479999999999999999999998  489999987532  2211    10  0002222221111   0122  356789


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEE
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIV  198 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v  198 (333)
                      |+||.+||...-+.   ....+.++.|..-...+++.+++ +-+.++
T Consensus        76 DvVVitAG~~~~~g---~sR~dl~~~Na~iv~~i~~~i~~~~~~~ii  119 (145)
T d1hyea1          76 DVVIITSGVPRKEG---MSRMDLAKTNAKIVGKYAKKIAEICDTKIF  119 (145)
T ss_dssp             SEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             eEEEEecccccCCC---CChhhhhhhhHHHHHHHHHHHhccCCCeEE
Confidence            99999999753221   12234567788888888886643 444444

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.96  E-value=4.7e-06  Score=65.18  Aligned_cols=101  Identities=20%  Similarity=0.182  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      +..|||+||+|++|...++.....|++|+++++++++.+.+.+.  +....+..-|.. .+.+....-+++|+||++.|.
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l--Gad~vi~~~~~~-~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL--GASEVISREDVY-DGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH--TCSEEEEHHHHC-SSCCCSSCCCCEEEEEESCCT
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh--cccceEeccchh-chhhhcccCCCceEEEecCcH
Confidence            44699999999999999999888999999999998887776543  222222222221 122221122479999999874


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      .                   .....+++++. -+++|.++..+.
T Consensus       101 ~-------------------~~~~~~~~l~~-~G~iv~~G~~~g  124 (167)
T d1tt7a2         101 K-------------------QLASLLSKIQY-GGSVAVSGLTGG  124 (167)
T ss_dssp             H-------------------HHHHHHTTEEE-EEEEEECCCSSC
T ss_pred             H-------------------HHHHHHHHhcc-CceEEEeeccCC
Confidence            2                   12334444443 358887765553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=6.9e-06  Score=63.20  Aligned_cols=76  Identities=14%  Similarity=0.197  Sum_probs=61.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      +|+|.|. |-+|+.+++.|.++|++|++++.++++...........++.++.||.+|++.+++.-++.+|+||-+..
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            6999996 899999999999999999999998865433322211568999999999999888556788999998863

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=6.7e-06  Score=64.73  Aligned_cols=96  Identities=22%  Similarity=0.247  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      ++.+|||+||+|.+|...++.+...|++|+++++++++.+...+.    ++.. ..|.++++..+ ++.     +++|+|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~----Ga~~-vi~~~~~~~~~-~i~~~t~~~g~d~v  101 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAHE-VFNHREVNYID-KIKKYVGEKGIDII  101 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSE-EEETTSTTHHH-HHHHHHCTTCEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccccc----Cccc-ccccccccHHH-HhhhhhccCCceEE
Confidence            456899999999999999999999999999999988776555432    2221 13666654333 222     268999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      |++.|..                   .....+++++.+ +++|.++.
T Consensus       102 ~d~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~  128 (174)
T d1yb5a2         102 IEMLANV-------------------NLSKDLSLLSHG-GRVIVVGS  128 (174)
T ss_dssp             EESCHHH-------------------HHHHHHHHEEEE-EEEEECCC
T ss_pred             eecccHH-------------------HHHHHHhccCCC-CEEEEEec
Confidence            9988631                   124445666553 58888753

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.87  E-value=1.6e-05  Score=60.33  Aligned_cols=111  Identities=21%  Similarity=0.231  Sum_probs=67.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC---CCeEEEEEcCcchhhhhhccCCC--CceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR---NIKSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~~~~~~~~~~~~~--~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      +||.|+|++|.+|++++..|..+   +.++++++..+. .+.......+  ..... .. +...+.+  +.++++|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~-~~-~~~~~~~--~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKI-KG-FSGEDAT--PALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEE-EE-ECSSCCH--HHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCC-cE-EEcCCCc--cccCCCCEEEE
Confidence            58999999999999999888643   478999987542 2211100001  11111 11 1122233  45789999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCe-EEEEe
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKR-IVLVS  201 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~-~v~~S  201 (333)
                      +||...-   ....-.+....|..-...+.+.+.. +-+. ++.+|
T Consensus        76 taG~~~k---~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRK---PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCC---CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9997532   2223355778899888888887643 4333 44433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.86  E-value=5.5e-06  Score=64.18  Aligned_cols=74  Identities=24%  Similarity=0.274  Sum_probs=57.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+++|||.|+ |.+|+.+++.|...|. +++++.|+.++++.+....   +.+++     +.+++. +.+..+|+||+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~---~~~~~-----~~~~~~-~~l~~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEAV-----RFDELV-DHLARSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEEC-----CGGGHH-HHHHTCSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh---hcccc-----cchhHH-HHhccCCEEEE
Confidence            457789999997 9999999999999997 6999999988887776432   22222     234566 67789999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            98753

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=4.5e-06  Score=65.59  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++.+|||+||+|.+|...++.+...|++|+++++++++.+...+.    ++..+ .|..+..... ....++|+||++.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l----Ga~~~-i~~~~~~~~~-~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GAEEA-ATYAEVPERA-KAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TCSEE-EEGGGHHHHH-HHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccc----cccee-eehhhhhhhh-hccccccccccccc
Confidence            467899999999999999999999999999999988776655532    22211 1332221111 23458999999876

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.84  E-value=1.2e-05  Score=63.36  Aligned_cols=101  Identities=17%  Similarity=0.165  Sum_probs=66.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCC--cCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d--~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+|||+||+|++|...++.+...|++|+++++++++.+...+.  +.... +  |..+  .+.+....=+++|+||++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l--Ga~~v-i--~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL--GAKEV-L--AREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT--TCSEE-E--ECC---------CCSCCEEEEEEC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc--cccee-e--ecchhHHHHHHHhhccCcCEEEEc
Confidence            356899999999999999999999999999999998887666532  22222 2  2222  111110011379999999


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      .|...                   ....++.++. -+|+|.++.....
T Consensus       106 vgg~~-------------------~~~~l~~l~~-~Griv~~G~~~g~  133 (176)
T d1xa0a2         106 VGGRT-------------------LATVLSRMRY-GGAVAVSGLTGGA  133 (176)
T ss_dssp             STTTT-------------------HHHHHHTEEE-EEEEEECSCCSSS
T ss_pred             CCchh-------------------HHHHHHHhCC-CceEEEeecccCc
Confidence            97531                   2445555554 3588887776543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.83  E-value=3.9e-05  Score=58.84  Aligned_cols=114  Identities=17%  Similarity=0.122  Sum_probs=71.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .+.+||.|.|+ |.+|+.++..|+..+ .++++++.++++.+.......      ........     ....+ +.++++
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~-~~~~~a   77 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYE-AALTGA   77 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHH-HHHTTC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-----cCchh-hhhcCC
Confidence            45679999997 999999999888887 589999988766543321100      11111111     12334 567899


Q ss_pred             cEEEEcCCCCCCCCCC--CCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEE
Q 019935          153 THVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV  200 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~  200 (333)
                      |+||.++|....+...  ...-.+....|..-...+++.+++ +-+.++.+
T Consensus        78 diVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aivii  128 (154)
T d1pzga1          78 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV  128 (154)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEE
Confidence            9999999976533211  012234566788888888886643 44444443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.79  E-value=0.0001  Score=56.98  Aligned_cols=66  Identities=15%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |++|.+.| .|.+|+.+++.|+++||+|++++|++++.+.+...    +..       ...... +.+..+|+|+-+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~----~~~-------~~~~~~-e~~~~~diii~~v~   66 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA----GAS-------AARSAR-DAVQGADVVISMLP   66 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT----TCE-------ECSSHH-HHHTSCSEEEECCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh----hcc-------ccchhh-hhccccCeeeeccc
Confidence            46899998 79999999999999999999999998887766532    111       113445 67788999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=2.4e-05  Score=61.18  Aligned_cols=76  Identities=20%  Similarity=0.180  Sum_probs=54.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCC-CceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..++|+|||.|+ |+.+++++..|.+.|.+|+++.|+.++.+.+...... ..+..  .+..+   .   ....+|+|||
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~~~---~---~~~~~dliIN   85 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSMDE---L---EGHEFDLIIN   85 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCSGG---G---TTCCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--ccccc---c---cccccceeec
Confidence            456789999995 9999999999999999999999999888776543321 12222  22211   1   1246899999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.....
T Consensus        86 ~Tp~G~   91 (170)
T d1nyta1          86 ATSSGI   91 (170)
T ss_dssp             CCSCGG
T ss_pred             ccccCc
Confidence            987654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=4.2e-05  Score=58.84  Aligned_cols=101  Identities=18%  Similarity=0.102  Sum_probs=65.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ++..||.|+|+ |.+|.+++..|+.+|  .+++++++++++++......     ....-..+..+     +.  +.+.++
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~-----d~--~~~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK-----DY--NVSANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES-----SG--GGGTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc-----ch--hhhccc
Confidence            34458999996 999999999999987  48999999876654321100     01111222211     12  345689


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      |+||..||...-+   .....+.++.|..-...++..++
T Consensus        89 divvitag~~~~~---~~~R~dll~~N~~i~~~i~~~i~  124 (159)
T d2ldxa1          89 KLVIITAGARMVS---GQTRLDLLQRNVAIMKAIVPGVI  124 (159)
T ss_dssp             EEEEECCSCCCCT---TTCSSCTTHHHHHHHHHHTTTHH
T ss_pred             cEEEEecccccCC---CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999975433   22334567888888888877653

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=1.2e-05  Score=53.78  Aligned_cols=43  Identities=26%  Similarity=0.265  Sum_probs=38.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ++.+|||+||+|++|...++.+...|++|+++++++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4568999999999999999998889999999999998876554

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.77  E-value=2.6e-05  Score=59.02  Aligned_cols=104  Identities=13%  Similarity=0.071  Sum_probs=61.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +||.|+|+ |.+|+.++..|+.+|  .+++++++++++.+.......     ........+       .. +.+.++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-------~~-~~~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG-------DY-SDVKDCDVI   72 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---------CG-GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC-------cH-HHhCCCceE
Confidence            47999997 999999999999987  489999998866433221110     112222111       12 456789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEE
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIV  198 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v  198 (333)
                      |.+||...-+   .....+....|..-...+++.++. +-+.++
T Consensus        73 vitag~~~~~---~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~  113 (142)
T d1y6ja1          73 VVTAGANRKP---GETRLDLAKKNVMIAKEVTQNIMKYYNHGVI  113 (142)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred             EEecccccCc---CcchhHHhhHHHHHHHHHHHHhhccCCCceE
Confidence            9999975321   122233566688777888876643 444333

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=8.5e-06  Score=64.34  Aligned_cols=75  Identities=16%  Similarity=0.110  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~v  155 (333)
                      ++.+|||+||+|.+|..+++.+...|++|+++++++++.+.+.+.    ++.. ..|..+++-.+ ++.     .++|+|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l----Ga~~-vi~~~~~d~~~-~v~~~t~g~g~d~v  101 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAWQ-VINYREEDLVE-RLKEITGGKKVRVV  101 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCSE-EEETTTSCHHH-HHHHHTTTCCEEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc----CCeE-EEECCCCCHHH-HHHHHhCCCCeEEE
Confidence            356999999999999999999999999999999999887766532    2222 23666654333 322     268999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      +++.+.
T Consensus       102 ~d~~g~  107 (179)
T d1qora2         102 YDSVGR  107 (179)
T ss_dssp             EECSCG
T ss_pred             EeCccH
Confidence            999874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=2.6e-05  Score=61.75  Aligned_cols=83  Identities=13%  Similarity=0.148  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhc---cCC-CCceEEEEccCCCcCCCchhhhcCCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFG---KQD-EETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~---~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      +..+++|+|.|+ |+.|++++..|.+.|. ++++++|++++.+.+..   ... .-.......|+.+.+.+. ..+..+|
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d   92 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA-EALASAD   92 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH-HHHHTCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh-hhhcccc
Confidence            467789999996 8999999999999985 78999998766544321   110 123445567888877777 6788999


Q ss_pred             EEEEcCCCCC
Q 019935          154 HVICCTGTTA  163 (333)
Q Consensus       154 ~vi~~a~~~~  163 (333)
                      +|||+.....
T Consensus        93 iiIN~Tp~G~  102 (182)
T d1vi2a1          93 ILTNGTKVGM  102 (182)
T ss_dssp             EEEECSSTTS
T ss_pred             eeccccCCcc
Confidence            9999987654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.72  E-value=8e-05  Score=57.26  Aligned_cols=108  Identities=15%  Similarity=0.156  Sum_probs=68.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCC-----CCceEEEEccCCCcCCCchhhhcCC
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      .+.+||.|.|+ |.+|+.++..|+.+|.  ++++++++++..+.......     ......+..     .++  +.+.++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~-----~d~--~~~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD-----KDY--SVTANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC-----SSG--GGGTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec-----cch--hhcccc
Confidence            34569999996 9999999999999984  89999998766533211000     111111111     122  346789


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEE
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIV  198 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v  198 (333)
                      |+||..||...-+   -....+....|..-...++..++. +.+.++
T Consensus        90 diVVitAg~~~~~---g~tR~~l~~~N~~i~~~i~~~i~~~~p~aii  133 (160)
T d1i0za1          90 KIVVVTAGVRQQE---GESRLNLVQRNVNVFKFIIPQIVKYSPDCII  133 (160)
T ss_dssp             SEEEECCSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             cEEEEecCCcccc---CcchHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            9999999975422   122234666788888888876643 444433

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.70  E-value=9e-05  Score=56.17  Aligned_cols=108  Identities=15%  Similarity=0.122  Sum_probs=66.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC------CCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |||.|+|+ |.+|+.++..|+.+|  .+++++++++++.+......      ..........|      .  +.+.++|+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d------~--~~l~~adi   72 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND------W--AALADADV   72 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC------G--GGGTTCSE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC------H--HHhccccE
Confidence            68999995 999999999999887  58999999887654321100      01222332222      2  34578999


Q ss_pred             EEEcCCCCCCCC-CCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          155 VICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       155 vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      ||.+||...... .....-.+..+.|..-...+.+.++. +-+.++.
T Consensus        73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivi  119 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV  119 (146)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            999999643111 11112244667788888888886643 4444443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.69  E-value=2.9e-05  Score=58.76  Aligned_cols=106  Identities=16%  Similarity=0.115  Sum_probs=66.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      .||.|+|+ |.+|++++..|+.+|  .+++++++++++.+......     ......+...+     ++  +.+.++|+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~-----~~--~~~~daDvV   73 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD-----DP--EICRDADMV   73 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES-----CG--GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC-----CH--HHhhCCcEE
Confidence            47999996 999999999999987  48999999886654321000     01122222222     23  236679999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      |.+||...-+   -....+.+..|..-...+++.++. +-+.++.
T Consensus        74 VitaG~~~~~---g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~i  115 (143)
T d1llda1          74 VITAGPRQKP---GQSRLELVGATVNILKAIMPNLVKVAPNAIYM  115 (143)
T ss_dssp             EECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             EEecccccCC---CCchhhhhhhhHHHHHHHHHHHHhhCCCeEEE
Confidence            9999975422   112234566788877777776643 4444443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.69  E-value=0.00015  Score=55.94  Aligned_cols=65  Identities=20%  Similarity=0.185  Sum_probs=51.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|.|.| .|.+|+.+++.|+++|++|++++|++++.+.+.+.    +...       ..+.. +..+.+|+||-+..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~----~~~~-------~~~~~-e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA----GAET-------ASTAK-AIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCEE-------CSSHH-HHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh----hhhh-------cccHH-HHHhCCCeEEEEcC
Confidence            4799998 69999999999999999999999999888877632    2221       12344 67788999999874

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.65  E-value=5.6e-05  Score=57.09  Aligned_cols=107  Identities=16%  Similarity=0.079  Sum_probs=65.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +||.|+|+ |.+|.+++..|+.++ .++++++.+++..+.......      .....+...     .+.  +.+.++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-----~d~--~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-----NNY--ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SCG--GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec-----CcH--HHhcCCCEE
Confidence            58999996 999999999998887 589999988766443211100      111122111     222  345689999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEEE
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV  200 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~~  200 (333)
                      |-+||...-+   .....+.+..|..-...+++.+.. +-+.++.+
T Consensus        74 vitag~~~~~---~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKP---GMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EECCSCC------------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEeeeccCCc---CcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            9999975422   222345678898888888886643 44444443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.65  E-value=3.9e-05  Score=60.42  Aligned_cols=76  Identities=13%  Similarity=0.065  Sum_probs=52.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      |+|.|.|+ |.+|..++..|+++|++|++++|++++.+.+.....    ....+..........++. +.++++|+||.+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIG-LAVKDADVILIV   79 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHH-HHHTTCSEEEEC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhH-hHhcCCCEEEEE
Confidence            68999996 999999999999999999999999877766542110    111111111111122345 677899999997


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            64

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=8e-06  Score=63.51  Aligned_cols=72  Identities=14%  Similarity=0.124  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |||+|.|+ |.+|+.++..|++.|++|.+++|++++..................    ..... +.++.+|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESL----TANDP-DFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEE----EESCH-HHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCcccccccc----ccchh-hhhcccceEEEeec
Confidence            58999997 999999999999999999999998866544322111111110000    11222 45678999999874

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.62  E-value=6.9e-05  Score=56.46  Aligned_cols=105  Identities=18%  Similarity=0.163  Sum_probs=65.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC-----CCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +||.|.|+ |.+|++++..|+.++  .+++++++++++.+......     -........+|      .  +.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~------~--~~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD------Y--ADLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC------G--GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc------H--HHhcCCCEE
Confidence            47899996 999999999998887  58999999876654321100     01223332222      2  346789999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      |.+||...-+   .....+.+..|..-...+++.+++ +-+.++.
T Consensus        72 vitag~~~~~---g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivi  113 (140)
T d1a5za1          72 IVAAGVPQKP---GETRLQLLGRNARVMKEIARNVSKYAPDSIVI  113 (140)
T ss_dssp             EECCCCCCCS---SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             EEecccccCC---CcchhhhhccccchHHHHHHHHHhcCCCcEEE
Confidence            9999975422   112233556677777777776643 4444444

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=5.6e-05  Score=59.40  Aligned_cols=98  Identities=14%  Similarity=0.058  Sum_probs=65.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-cCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-~~~d~vi~~a~~  161 (333)
                      .+|||+||+|++|...++.+...|++|++++|++++.+.+.+    -++..+ .|..+++..+ .+. ...|.+|++.+.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~----lGad~v-i~~~~~~~~~-~l~~~~~~~vvD~Vgg  106 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS----LGASRV-LPRDEFAESR-PLEKQVWAGAIDTVGD  106 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH----HTEEEE-EEGGGSSSCC-SSCCCCEEEEEESSCH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh----hccccc-cccccHHHHH-HHHhhcCCeeEEEcch
Confidence            479999999999999999999999999999999988776542    233322 2333333322 222 246889988763


Q ss_pred             CCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      .                   .....++.++. -+|+|.++....+
T Consensus       107 ~-------------------~~~~~l~~l~~-~Griv~~G~~~~~  131 (177)
T d1o89a2         107 K-------------------VLAKVLAQMNY-GGCVAACGLAGGF  131 (177)
T ss_dssp             H-------------------HHHHHHHTEEE-EEEEEECCCTTCS
T ss_pred             H-------------------HHHHHHHHhcc-ccceEeecccCCc
Confidence            1                   12344555543 3588988766543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.60  E-value=0.00012  Score=55.32  Aligned_cols=98  Identities=16%  Similarity=0.011  Sum_probs=62.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC------CCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +||.|+|| |.+|++++..|+..|  .+++++++++++.+......      ......+...     .+ . +.+.++|+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~-----~~-~-~~~~dadv   72 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-----ND-Y-ADTANSDI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-----SC-G-GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec-----CC-H-HHhcCCeE
Confidence            47999996 999999999999987  58999999886654321110      0122333221     11 2 34678999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      ||.+||...-+   .....+....|..-...+++.++
T Consensus        73 vvitag~~~~~---g~~r~~l~~~N~~i~~~i~~~i~  106 (142)
T d1guza1          73 VIITAGLPRKP---GMTREDLLMKNAGIVKEVTDNIM  106 (142)
T ss_dssp             EEECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCCC---CCchHHHHHHHHHHHHHHHHHhh
Confidence            99999874321   11223345567777777777654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.55  E-value=6.3e-05  Score=58.29  Aligned_cols=65  Identities=17%  Similarity=0.181  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|.|.|. |.+|+.+++.|.++|++|++++|+++..+...+.    ++.    |  ...+.. +.++++|+||-+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~----~~~----~--~~~~~~-~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLV----D--EAGQDL-SLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSC----S--EEESCG-GGGTTCSEEEECS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh----hcc----c--eeeeec-ccccccccccccC
Confidence            47999985 9999999999999999999999998776654421    110    1  011122 4567899999765

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.53  E-value=0.00016  Score=54.44  Aligned_cols=104  Identities=15%  Similarity=0.102  Sum_probs=64.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCc--chhhh----hhc-cCCCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP--EKATT----LFG-KQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~--~~~~~----~~~-~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      ||.|+||+|.+|++++..|+.+|  .++++++.+.  +..+.    +.. ..-.....+..+|      .  +.+.++|+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~------~--~~~~~aDi   73 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG------Y--EDTAGSDV   73 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC------G--GGGTTCSE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC------H--HHhhhcCE
Confidence            79999999999999999999987  3788888543  22221    110 0002233333333      2  23568999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEE
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIV  198 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v  198 (333)
                      ||..||...-+.   ..-.+.++.|..-...+++.++. +-+.++
T Consensus        74 VvitaG~~~~~g---~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~  115 (142)
T d1o6za1          74 VVITAGIPRQPG---QTRIDLAGDNAPIMEDIQSSLDEHNDDYIS  115 (142)
T ss_dssp             EEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred             EEEecccccccC---CchhhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence            999999653221   12234567788888888887644 444333

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.52  E-value=0.00024  Score=55.58  Aligned_cols=122  Identities=11%  Similarity=0.120  Sum_probs=75.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~~  162 (333)
                      .+|.|.| .|.+|+.+++.|+++|++|++++|++++.+.+.+.........  + ....+++. +.+..+|.++-+....
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~--~-a~~~~~~~-~~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL--G-AHSLEEMV-SKLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE--E-CSSHHHHH-HHBCSSCEEEECSCTT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc--c-hhhhhhhh-hhhcccceEEEecCch
Confidence            4799999 6999999999999999999999999999887754321111100  0 11223333 4566789988876321


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCEEE
Q 019935          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~~~  241 (333)
                                ....    .....++..++.+ +-+|.+||...                 ...+..++.+.+.|+.+.-
T Consensus        78 ----------~~v~----~v~~~l~~~~~~g-~iiid~sT~~~-----------------~~~~~~~~~~~~~g~~~ld  124 (176)
T d2pgda2          78 ----------QAVD----NFIEKLVPLLDIG-DIIIDGGNSEY-----------------RDTMRRCRDLKDKGILFVG  124 (176)
T ss_dssp             ----------HHHH----HHHHHHHHHCCTT-CEEEECSCCCH-----------------HHHHHHHHHHHHTTCEEEE
T ss_pred             ----------HHHH----HHHHHHHhccccC-cEEEecCcchh-----------------HHHHHHHHHHHhcCCceec
Confidence                      0011    1223445555443 45666666554                 2234455667777877764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=6.2e-05  Score=57.01  Aligned_cols=71  Identities=13%  Similarity=0.183  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC----CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      |++|.|.||||++|+.+++.|+++.    .+++++.++..........  ..       ++...+..+...+.++|++|.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~--~~-------~~~~~~~~~~~~~~~~DivF~   71 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG--GT-------TGTLQDAFDLEALKALDIIVT   71 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG--TC-------CCBCEETTCHHHHHTCSEEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc--CC-------ceeeecccchhhhhcCcEEEE
Confidence            4689999999999999999888753    3666666554332221100  00       111111122135679999999


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +++.
T Consensus        72 a~~~   75 (146)
T d1t4ba1          72 CQGG   75 (146)
T ss_dssp             CSCH
T ss_pred             ecCc
Confidence            9853

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.49  E-value=4.7e-05  Score=59.29  Aligned_cols=76  Identities=16%  Similarity=0.248  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|+|.|+ |.+|...++.+...|++|+++++++++.+...+.  +.. +++  |..+...+.+...++.|.++.+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l--Ga~-~~i--~~~~~~~~~~~~~~~~d~vi~~~~  100 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM--GAD-HYI--ATLEEGDWGEKYFDTFDLIVVCAS  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH--TCS-EEE--EGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc--CCc-EEe--eccchHHHHHhhhcccceEEEEec
Confidence            4568999996 9999999988888899999999998877655432  222 222  332333333244568999999987


Q ss_pred             CC
Q 019935          161 TT  162 (333)
Q Consensus       161 ~~  162 (333)
                      ..
T Consensus       101 ~~  102 (168)
T d1piwa2         101 SL  102 (168)
T ss_dssp             CS
T ss_pred             CC
Confidence            53

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=6.9e-05  Score=61.11  Aligned_cols=78  Identities=14%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc
Q 019935           78 PASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP  141 (333)
Q Consensus        78 ~~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~  141 (333)
                      .++.+++||||+|                ||..|.+|++++..+|++|+++.-......       ..++..+...  ..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-------p~~~~~~~~~--t~   72 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-------PPFVKRVDVM--TA   72 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-------CTTEEEEECC--SH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-------ccccccceeh--hh
Confidence            3567888888875                799999999999999999999986543211       3345444332  22


Q ss_pred             CCCch---hhhcCCcEEEEcCCCCCC
Q 019935          142 KDLDP---AIFEGVTHVICCTGTTAF  164 (333)
Q Consensus       142 ~~~~~---~~~~~~d~vi~~a~~~~~  164 (333)
                      +++..   +.+..+|++|++|++..+
T Consensus        73 ~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          73 LEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHHhhhccceeEeeeechhhh
Confidence            22221   345689999999998653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.47  E-value=0.00035  Score=52.50  Aligned_cols=106  Identities=12%  Similarity=0.108  Sum_probs=66.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcchhhhhhccC------CCCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      |||.|.|+ |.+|++++..|+.+|  .+++++++++++.+......      ......+...     .+.  +.+.++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~-----~d~--~~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----ADY--SLLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SCG--GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC-----CCH--HHhccccE
Confidence            58999996 999999999999887  47999999887654321000      0112222221     122  35678999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      ||..||...-+.   ....+....|..-...+++.+++ +-+.++.
T Consensus        73 Vvitag~~~~~g---~~r~~l~~~n~~i~~~i~~~i~~~~p~aivi  115 (142)
T d1ojua1          73 IVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENAPESKIL  115 (142)
T ss_dssp             EEECCCCCCCSS---CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEE
T ss_pred             EEEeccccCCCC---CchHHHHHHhhHHHHHHHHHHHhhCCCcEEE
Confidence            999998654221   12233556677777777776643 4444444

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.47  E-value=0.00011  Score=56.03  Aligned_cols=40  Identities=23%  Similarity=0.316  Sum_probs=35.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~  118 (333)
                      ...+++|.|.||.|.+|+.+++.|.++||+|++++|+...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            4456799999999999999999999999999999987543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.45  E-value=8.6e-05  Score=57.97  Aligned_cols=76  Identities=22%  Similarity=0.215  Sum_probs=54.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ...+++|+|.|+ |+.+++++..|.+.+.+|+++.|+.++++.+..... ...+..+..|-        ..+..+|+|||
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~--------~~~~~~diiIN   85 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS--------IPLQTYDLVIN   85 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--------CCCSCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc--------ccccccceeee
Confidence            456789999995 999999999999888999999999988877654321 12333333331        12356899999


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      +.....
T Consensus        86 ~tp~g~   91 (171)
T d1p77a1          86 ATSAGL   91 (171)
T ss_dssp             CCCC--
T ss_pred             cccccc
Confidence            987653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.45  E-value=4.2e-05  Score=56.81  Aligned_cols=70  Identities=20%  Similarity=0.255  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|+|.|. |-+|+.+++.|  +|++|+++..+++..+.+.    ..++.++.||.+|++.|++.-++.++.+|-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57899985 89999999998  4677888999888777665    55789999999999988855578899999765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.42  E-value=0.00015  Score=56.31  Aligned_cols=69  Identities=19%  Similarity=0.265  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      ++++|+|.|+ |+.|++++..|.+.|. +|+++.|+.++.+.+....   +...+       +.+.   ...+|+|||+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~---~~~~~-------~~~~---~~~~DliINaT   81 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY---GYAYI-------NSLE---NQQADILVNVT   81 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH---TCEEE-------SCCT---TCCCSEEEECS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh---hhhhh-------hccc---ccchhhheecc
Confidence            4578999995 9999999999999995 7999999998887775422   11111       1122   24589999987


Q ss_pred             CCCC
Q 019935          160 GTTA  163 (333)
Q Consensus       160 ~~~~  163 (333)
                      ....
T Consensus        82 piGm   85 (167)
T d1npya1          82 SIGM   85 (167)
T ss_dssp             STTC
T ss_pred             ccCC
Confidence            6653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.40  E-value=0.00015  Score=55.21  Aligned_cols=109  Identities=11%  Similarity=0.095  Sum_probs=67.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      .||.|.|+ |.+|++++..|+..+ .++++++++++..+.......      .....+...|      .. +.+.++|+|
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~------~~-~~~~~advv   75 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN------TY-DDLAGADVV   75 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC------CG-GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc------cc-cccCCCcEE
Confidence            48999995 999999998887777 589999998866543311110      1122222211      22 356789999


Q ss_pred             EEcCCCCCCCCCC--CCCCCCCcchhHHHHHHHHHhcCC-CCCeEEE
Q 019935          156 ICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVL  199 (333)
Q Consensus       156 i~~a~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~v~  199 (333)
                      |.++|....+...  ...-.+.+..|..-...+++.+++ +-+.++.
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivi  122 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII  122 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            9999976533211  011234567788888888886644 4444443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.38  E-value=0.00029  Score=55.13  Aligned_cols=42  Identities=19%  Similarity=0.222  Sum_probs=37.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhcc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK  125 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~  125 (333)
                      |+|.|.| .|.+|..+++.|+++||+|++++|++++.+.+.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            4799998 79999999999999999999999999988877543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.38  E-value=1.8e-05  Score=60.81  Aligned_cols=102  Identities=13%  Similarity=0.071  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC----e---EEEEE--cCcchhhhhh---ccCCCCceEEEEccCCCcCCCchhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI----K---SRLLL--RDPEKATTLF---GKQDEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~----~---V~~~~--R~~~~~~~~~---~~~~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      .++|.|+||+|++|++++..|+..+.    .   ..++.  ++.++.+...   ..........+...    .... +.+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~   78 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPK-VAF   78 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHH-HHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchh-hhc
Confidence            35899999999999999999987642    1   12222  2222222211   11112222222222    2233 567


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcC
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~  191 (333)
                      +++|+||.++|...-   ......+.+..|..-...+.+.+.
T Consensus        79 ~~advViitaG~~~~---pg~~r~dl~~~N~~i~~~~~~~i~  117 (154)
T d1y7ta1          79 KDADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALA  117 (154)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccEEEeecCcCCC---CCCcHHHHHHHHHHHHHHHHHHHH
Confidence            899999999997542   222233466778888888888664

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=8.6e-05  Score=57.72  Aligned_cols=74  Identities=16%  Similarity=0.213  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+.+|+|.|+ |.+|...++.+...|+++++++++.++.+...+.  +.. .+  .|..+++... ...+++|++|.+.|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~l--Gad-~~--i~~~~~~~~~-~~~~~~D~vid~~g  102 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL--GAD-EV--VNSRNADEMA-AHLKSFDFILNTVA  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--TCS-EE--EETTCHHHHH-TTTTCEEEEEECCS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhcc--CCc-EE--EECchhhHHH-HhcCCCceeeeeee
Confidence            4578999986 9999999999888999999999988776544321  222 11  3555554444 45578999999997


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       103 ~  103 (168)
T d1uufa2         103 A  103 (168)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.34  E-value=0.00027  Score=54.82  Aligned_cols=97  Identities=15%  Similarity=0.166  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcC--CCchhhh-----cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAIF-----EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~--~~~~~~~-----~~~d  153 (333)
                      .+.+|+|+| +|.+|...++.+...|++|+++++++++.+...+.  +.... +..|-.+.+  .+. +.+     .++|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~--ga~~~-~~~~~~~~~~~~~~-~~~~~~~g~g~D  100 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC--GADVT-LVVDPAKEEESSII-ERIRSAIGDLPN  100 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TCSEE-EECCTTTSCHHHHH-HHHHHHSSSCCS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc--CCcEE-Eeccccccccchhh-hhhhcccccCCc
Confidence            345899997 69999999999988999999999999887655432  22222 222322211  111 111     3689


Q ss_pred             EEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       154 ~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      +||.++|..                  ......++.++.+ +++++++
T Consensus       101 ~vid~~g~~------------------~~~~~a~~~~~~~-G~iv~~G  129 (170)
T d1e3ja2         101 VTIDCSGNE------------------KCITIGINITRTG-GTLMLVG  129 (170)
T ss_dssp             EEEECSCCH------------------HHHHHHHHHSCTT-CEEEECS
T ss_pred             eeeecCCCh------------------HHHHHHHHHHhcC-CceEEEe
Confidence            999999752                  1234455666653 5888766

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.31  E-value=0.00025  Score=50.84  Aligned_cols=67  Identities=13%  Similarity=0.143  Sum_probs=52.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi  156 (333)
                      ..+|.|.| +|.+|+-++.+..+.|++|++++.+++......      .-+++.+|+.|.+.+. ++..  ++|+|-
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v------a~~~i~~~~~d~~~l~-~~~~~~~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV------AHRSHVINMLDGDALR-RVVELEKPHYIV   79 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG------SSEEEECCTTCHHHHH-HHHHHHCCSEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc------CCeEEECCCCCHHHHH-HHHHhhCCceEE
Confidence            35899999 599999999999999999999998865433211      2256789999999887 5543  679884

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.27  E-value=0.00031  Score=56.26  Aligned_cols=73  Identities=15%  Similarity=0.154  Sum_probs=51.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccC-------------CCcCCCchhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT-------------RNPKDLDPAIF  149 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~-------------~d~~~~~~~~~  149 (333)
                      |+|.|.| .|++|..++..|+++|++|++++.++++.+.+....    ..+.+-++             .-..++. +++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~----~p~~e~~~~~~l~~~~~~~~~~~~~~~~-~~i   74 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK----SPIVEPGLEALLQQGRQTGRLSGTTDFK-KAV   74 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----CSSCCTTHHHHHHHHHHTTCEEEESCHH-HHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccC----CcccchhhhhhhhhhhcccccccCCCHH-HHH
Confidence            5799997 699999999999999999999999988877664211    10001000             1112333 556


Q ss_pred             cCCcEEEEcCCC
Q 019935          150 EGVTHVICCTGT  161 (333)
Q Consensus       150 ~~~d~vi~~a~~  161 (333)
                      ..+|+++.+.+.
T Consensus        75 ~~~d~i~i~VpT   86 (202)
T d1mv8a2          75 LDSDVSFICVGT   86 (202)
T ss_dssp             HTCSEEEECCCC
T ss_pred             hhCCEEEEecCc
Confidence            789999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.0005  Score=47.55  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++++|+|+|.|. |..|..+++.|.++|++|++.+.+..... ...    .....+..+..     -+ ..+.++|.||-
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~----~~~~~~~~~~~-----~~-~~~~~~d~vi~   70 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL----PEAVERHTGSL-----ND-EWLMAADLIVA   70 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS----CTTSCEEESBC-----CH-HHHHHCSEEEE
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH----hhccceeeccc-----ch-hhhccCCEEEE
Confidence            567899999996 88999999999999999999998654221 111    22333433332     12 45678999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      .-|+.
T Consensus        71 SPGi~   75 (93)
T d2jfga1          71 SPGIA   75 (93)
T ss_dssp             CTTSC
T ss_pred             CCCCC
Confidence            88863

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.26  E-value=0.00055  Score=53.32  Aligned_cols=101  Identities=16%  Similarity=0.069  Sum_probs=62.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC---CC----eEEEEEcCcch--hhhhh---ccCCCCceE-EEEccCCCcCCCchhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR---NI----KSRLLLRDPEK--ATTLF---GKQDEETLQ-VCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~---g~----~V~~~~R~~~~--~~~~~---~~~~~~~~~-~v~~D~~d~~~~~~~~~  149 (333)
                      .+|.||||+|+||++++..|+..   |.    .+++++.+...  ++.+.   ......... .+.+     .... +.+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-----~~~~-~~~   98 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-----IDPY-EVF   98 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-----SCHH-HHT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-----ccch-hhc
Confidence            47999999999999999999874   31    45555554422  22211   111112221 1112     1233 567


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCC
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS  192 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~  192 (333)
                      +++|+||-.+|...-   ......+.+..|..-...+.+++..
T Consensus        99 ~~aDvVvi~ag~~rk---pg~tR~Dll~~N~~I~k~~~~~i~~  138 (175)
T d7mdha1          99 EDVDWALLIGAKPRG---PGMERAALLDINGQIFADQGKALNA  138 (175)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEeeccCCC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            899999999987542   2233344677788888888887743

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.24  E-value=5.7e-05  Score=59.36  Aligned_cols=77  Identities=23%  Similarity=0.250  Sum_probs=52.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhcCCcE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~~~d~  154 (333)
                      +.++|+|||.|+ |+.+++++..|.+.| +|+++.|+.++.+.+.....    ......+  ++   ..+. ..+...|.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~--~~---~~~~-~~~~~~dl   86 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV--KF---SGLD-VDLDGVDI   86 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE--EE---ECTT-CCCTTCCE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhh--hh---hhhh-hccchhhh
Confidence            467889999995 899999999997777 99999999988776543210    1111111  11   2233 33456899


Q ss_pred             EEEcCCCCC
Q 019935          155 VICCTGTTA  163 (333)
Q Consensus       155 vi~~a~~~~  163 (333)
                      +||+.....
T Consensus        87 iIn~tp~g~   95 (177)
T d1nvta1          87 IINATPIGM   95 (177)
T ss_dssp             EEECSCTTC
T ss_pred             hccCCcccc
Confidence            999987654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.23  E-value=0.00079  Score=48.32  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=53.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      .++++|+|||.|+ |.+|..-++.|++.|++|++++....... .+..   ..+++++..+..+      +.+.+++.|+
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---~~~i~~~~~~~~~------~dl~~~~lv~   77 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---EGMLTLVEGPFDE------TLLDSCWLAI   77 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---TTSCEEEESSCCG------GGGTTCSEEE
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---cCCceeeccCCCH------HHhCCCcEEe
Confidence            3678899999995 99999999999999999999987654432 2222   4567777655532      3356788888


Q ss_pred             EcCC
Q 019935          157 CCTG  160 (333)
Q Consensus       157 ~~a~  160 (333)
                      .+.+
T Consensus        78 ~at~   81 (113)
T d1pjqa1          78 AATD   81 (113)
T ss_dssp             ECCS
T ss_pred             ecCC
Confidence            7653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.20  E-value=4.9e-05  Score=60.41  Aligned_cols=78  Identities=13%  Similarity=0.195  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC----CCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +.|++|.|.|| |..|.+++..|+++|++|+++.|+++..+.+.....    .+++.+ .-++.-..+++ ++++++|+|
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~-~a~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVE-KAYNGAEII   81 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHH-HHHTTCSCE
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhh-hccCCCCEE
Confidence            34568999995 999999999999999999999999887766543211    111111 01111123456 778899999


Q ss_pred             EEcCC
Q 019935          156 ICCTG  160 (333)
Q Consensus       156 i~~a~  160 (333)
                      |.+..
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            88763

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.19  E-value=0.00017  Score=56.75  Aligned_cols=96  Identities=16%  Similarity=0.148  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC--Cchhh---h--cCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD--LDPAI---F--EGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~--~~~~~---~--~~~  152 (333)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+...+.  +.. .+  .|..+.+.  ..++.   .  .++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l--Ga~-~v--i~~~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI--GAD-LT--LNRRETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT--TCS-EE--EETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccc--cce-EE--EeccccchHHHHHHHHHhhCCCCc
Confidence            4579999996 9999999999999997 799999998877655432  221 12  24443321  11011   1  268


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      |+||.+.|...                  .....++.++.+ +++++++
T Consensus       102 Dvvid~vG~~~------------------~~~~a~~~l~~~-G~iv~~G  131 (182)
T d1vj0a2         102 DFILEATGDSR------------------ALLEGSELLRRG-GFYSVAG  131 (182)
T ss_dssp             EEEEECSSCTT------------------HHHHHHHHEEEE-EEEEECC
T ss_pred             eEEeecCCchh------------------HHHHHHHHhcCC-CEEEEEe
Confidence            99999997521                  234455666654 5787765

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.19  E-value=0.00061  Score=51.92  Aligned_cols=101  Identities=15%  Similarity=0.058  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEEcCcch--hhhhh---ccCCCCceEEEEccCCCcCCCchhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTLF---GKQDEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~R~~~~--~~~~~---~~~~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      .+||.|+||+|.+|++++..|+..+.       ++++++.+..+  .+.+.   ..........+..    ..... +.+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~-~~~   77 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEE-IAF   77 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHH-HHT
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----Ccccc-ccc
Confidence            35899999999999999999986531       34555544322  22221   0000112211111    11233 567


Q ss_pred             cCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhc
Q 019935          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL  190 (333)
Q Consensus       150 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~  190 (333)
                      +++|+||-++|...-   ......+.+..|..-...+.+.+
T Consensus        78 ~~~dvVVitag~~~~---~g~sr~dll~~N~~i~k~~~~~i  115 (154)
T d5mdha1          78 KDLDVAILVGSMPRR---DGMERKDLLKANVKIFKCQGAAL  115 (154)
T ss_dssp             TTCSEEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEecccCCC---CCCchhHHHHHhHHHHHHHHHHH
Confidence            889999999997542   23344567888988888888766

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.18  E-value=0.00098  Score=51.82  Aligned_cols=97  Identities=16%  Similarity=0.135  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh-----hcCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~-----~~~~d~  154 (333)
                      .+.+|+|+|+ |.||...++.+...|+ +|++.++++++.+...+.    ++..+ .|..+.+...+..     -.++|+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~----Ga~~~-i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GATDC-LNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSEE-ECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHh----CCCcc-cCCccchhhhhhhHhhhhcCCCcE
Confidence            4568999985 9999999999999997 577788888776544321    22211 1222222221122     147999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      +|.++|..                  ......++.++.+.++++.++
T Consensus       102 vie~~G~~------------------~~~~~a~~~~~~g~G~~v~vG  130 (174)
T d1e3ia2         102 SLDCAGTA------------------QTLKAAVDCTVLGWGSCTVVG  130 (174)
T ss_dssp             EEESSCCH------------------HHHHHHHHTBCTTTCEEEECC
T ss_pred             EEEecccc------------------hHHHHHHHHhhcCCeEEEecC
Confidence            99999852                  122344455565557888866

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.16  E-value=0.0012  Score=51.35  Aligned_cols=74  Identities=18%  Similarity=0.169  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhh-----hcCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI-----FEGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~-----~~~~d  153 (333)
                      .+.+|+|.|+ |++|...+..+...| .+|+++++++++.+...+.    ++..+ .|..+. +.+. +.     -.++|
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~----Ga~~~-i~~~~~~~~~~-~~~~~~~~~G~D  100 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GATEC-VNPQDYKKPIQ-EVLTEMSNGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSEE-ECGGGCSSCHH-HHHHHHTTSCBS
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh----CCeeE-EecCCchhHHH-HHHHHHhcCCCC
Confidence            4568999998 779999999999987 5889999998887765432    22211 122222 2222 21     24799


Q ss_pred             EEEEcCCC
Q 019935          154 HVICCTGT  161 (333)
Q Consensus       154 ~vi~~a~~  161 (333)
                      ++|.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2jhfa2         101 FSFEVIGR  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEecCCc
Confidence            99999986

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.09  E-value=0.00026  Score=54.95  Aligned_cols=75  Identities=21%  Similarity=0.194  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|+|+|++|.+|...+..+...| .+|+++++++++.+...+.  +.. ++  .|..+++..+ +..     .++|+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~--Ga~-~~--i~~~~~~~~~-~~~~~~~~~~~d~  100 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--GAD-YV--INASMQDPLA-EIRRITESKGVDA  100 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--TCS-EE--EETTTSCHHH-HHHHHTTTSCEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc--CCc-ee--eccCCcCHHH-HHHHHhhcccchh
Confidence            45689999999999999999999888 5888899988776655422  221 22  2444443333 222     35899


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.05  E-value=0.0013  Score=51.00  Aligned_cols=98  Identities=15%  Similarity=0.151  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++++.+...+.    +++.+ .|..+.+....+..     .++|+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l----Ga~~~-i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GATEC-LNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCSEE-ECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc----CCcEE-EcCCCchhHHHHHHHHhcCCCCcE
Confidence            4568999995 9999999999999995 788899998877655432    22221 24444333221221     37999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEec
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  202 (333)
                      +|.+.|..                  ......++.++.+.+++++++-
T Consensus       101 vid~~g~~------------------~~~~~~~~~~~~~~G~~v~vG~  130 (174)
T d1p0fa2         101 AVECAGRI------------------ETMMNALQSTYCGSGVTVVLGL  130 (174)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEEcCCCc------------------hHHHHHHHHHHHhcCceEEEEE
Confidence            99999752                  2335555666665578887663

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.03  E-value=0.00033  Score=53.34  Aligned_cols=65  Identities=12%  Similarity=0.127  Sum_probs=50.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|.+.| +|.+|+++++.|++.|++|++.+|+.++.+.+.+..   ++.+       ..+.+ ++++.+|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~---g~~~-------~~~~~-~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL---ALPY-------AMSHQ-DLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH---TCCB-------CSSHH-HHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc---ceee-------echhh-hhhhccceeeeec
Confidence            4789998 699999999999999999999999988877664322   1111       12345 6678999999876

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.00  E-value=0.00064  Score=51.20  Aligned_cols=69  Identities=17%  Similarity=0.249  Sum_probs=40.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-C---CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-N---IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g---~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      |+|.|.||||++|+.+++.|+++ .   .++..++.+....+..         .+..-+....+......+.++|+||.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~---------~~~~~~~~~~~~~~~~~~~~~DvvF~a   71 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP---------NFGKDAGMLHDAFDIESLKQLDAVITC   71 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC---------CSSSCCCBCEETTCHHHHTTCSEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc---------ccCCcceeeecccchhhhccccEEEEe
Confidence            47999999999999999988864 3   3555554432211111         000001111111221456789999999


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ++
T Consensus        72 lp   73 (147)
T d1mb4a1          72 QG   73 (147)
T ss_dssp             SC
T ss_pred             cC
Confidence            85

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.94  E-value=0.0014  Score=51.00  Aligned_cols=99  Identities=14%  Similarity=0.111  Sum_probs=63.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~  154 (333)
                      .+.+|+|+|+ |++|...++.+...| .+|+++++++++.+...+.  +... ++  |..+.+...+..   .  .++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~--GA~~-~i--n~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV--GATE-CI--SPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH--TCSE-EE--CGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc--CCcE-EE--CccccchHHHHHHHHhccccceE
Confidence            4568999985 999999999999999 5899999999887654422  2222 22  333433332111   1  37999


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecc
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  203 (333)
                      +|.+.|...                  .....+..+..+.+++|+++..
T Consensus       103 vi~~~g~~~------------------~~~~a~~~~~~~~G~~v~vG~~  133 (176)
T d1d1ta2         103 TFEVIGHLE------------------TMIDALASCHMNYGTSVVVGVP  133 (176)
T ss_dssp             EEECSCCHH------------------HHHHHHTTSCTTTCEEEECSCC
T ss_pred             EEEeCCchH------------------HHHHHHHHhhcCCeEEEEEEcc
Confidence            999998531                  1122333444455788887643

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.00049  Score=51.80  Aligned_cols=34  Identities=32%  Similarity=0.415  Sum_probs=27.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC---CeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~  116 (333)
                      ++|.|.||||++|+.+++.|.+++   .++..+..+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            589999999999999999997654   4677665443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0011  Score=50.50  Aligned_cols=70  Identities=20%  Similarity=0.204  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+|+++|.| .|.||+.+++.|...|.+|++...++.++-+..    .        |-.....++ +++...|++|-+
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----~--------dG~~v~~~~-~a~~~adivvta   86 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----M--------EGYEVTTMD-EACQEGNIFVTT   86 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----H--------TTCEECCHH-HHTTTCSEEEEC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----c--------CceEeeehh-hhhhhccEEEec
Confidence            46789999999 799999999999999999999999885543221    1        222233455 677788999999


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .|..
T Consensus        87 TGn~   90 (163)
T d1li4a1          87 TGCI   90 (163)
T ss_dssp             SSCS
T ss_pred             CCCc
Confidence            8853

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.90  E-value=0.00095  Score=51.54  Aligned_cols=69  Identities=16%  Similarity=0.080  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |++|+|.| .|.+|..+++.|.+.|+  +|++++|+++..+...+..   .+.....      .........+|.||.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~---~~~~~~~------~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG---IIDEGTT------SIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT---SCSEEES------CGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh---cchhhhh------hhhhhhccccccccccC
Confidence            46899998 59999999999999985  7888999887766554321   1111111      11102234689999887


Q ss_pred             C
Q 019935          160 G  160 (333)
Q Consensus       160 ~  160 (333)
                      .
T Consensus        71 p   71 (171)
T d2g5ca2          71 P   71 (171)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0011  Score=51.25  Aligned_cols=97  Identities=18%  Similarity=0.196  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|+|.|+ |.+|...+..+...|+ +|+++++++++.+...+.  +.. +++..+-.+..... +.+     .++|+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~--Ga~-~~~~~~~~~~~~~~-~~~~~~~g~g~Dv  100 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI--GAD-LVLQISKESPQEIA-RKVEGQLGCKPEV  100 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--TCS-EEEECSSCCHHHHH-HHHHHHHTSCCSE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh--CCc-cccccccccccccc-ccccccCCCCceE
Confidence            3458999986 9999999999999998 799999998887654421  222 12222222222222 221     26899


Q ss_pred             EEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       155 vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      ||.+.|..                  ......++.++.+ +++++++
T Consensus       101 vid~~G~~------------------~~~~~a~~~~~~g-G~iv~~G  128 (171)
T d1pl8a2         101 TIECTGAE------------------ASIQAGIYATRSG-GTLVLVG  128 (171)
T ss_dssp             EEECSCCH------------------HHHHHHHHHSCTT-CEEEECS
T ss_pred             EEeccCCc------------------hhHHHHHHHhcCC-CEEEEEe
Confidence            99999752                  1223445566653 5888766

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.86  E-value=0.0022  Score=50.02  Aligned_cols=94  Identities=17%  Similarity=0.188  Sum_probs=64.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+++|.|.| .|.||+.+++.|...|.+|++++|++...                 +..-.++++ +++..+|+|+.+
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~-----------------~~~~~~~l~-ell~~sDiv~~~   99 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG-----------------PWRFTNSLE-EALREARAAVCA   99 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS-----------------SSCCBSCSH-HHHTTCSEEEEC
T ss_pred             cccCceEEEec-cccccccceeeeecccccccccccccccc-----------------ceeeeechh-hhhhccchhhcc
Confidence            47789999999 59999999999999999999999875321                 111234678 899999999998


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccc
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~  205 (333)
                      .....       ....++  |    ...++.++.+ .-||++|-...
T Consensus       100 ~pl~~-------~t~~li--~----~~~l~~mk~~-ailIN~~RG~i  132 (181)
T d1qp8a1         100 LPLNK-------HTRGLV--K----YQHLALMAED-AVFVNVGRAEV  132 (181)
T ss_dssp             CCCST-------TTTTCB--C----HHHHTTSCTT-CEEEECSCGGG
T ss_pred             ccccc-------cccccc--c----cceeeecccc-ceEEecccccc
Confidence            75431       111122  2    3445555553 36777765444

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.81  E-value=0.00046  Score=54.09  Aligned_cols=76  Identities=13%  Similarity=0.245  Sum_probs=49.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcch--hhhhhccCCCCc--eEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEET--LQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~--~~~~~~~~~~~~--~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      |+|.|.|+ |..|.+++..|+++|++|+++.|+.++  .+.+........  ......++.-.++++ ++++++|+||.+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLE-KCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHH-HHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHH-HHHhccchhhcc
Confidence            58999995 999999999999999999999985443  333322111111  111111112233455 678899999987


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus        79 vp   80 (180)
T d1txga2          79 VS   80 (180)
T ss_dssp             SC
T ss_pred             cc
Confidence            64

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.79  E-value=0.00034  Score=55.19  Aligned_cols=102  Identities=14%  Similarity=0.115  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEE-EEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--h-hhcCCcEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--A-IFEGVTHVIC  157 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~-~~~~~d~vi~  157 (333)
                      +.+|||+||+|.+|+..++.+...|.++++ .++++++...+.... +..   ...|..+++..+.  + .-+++|+||+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-gad---~vi~~~~~~~~~~~~~~~~~GvDvv~D  106 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-GFD---AAVNYKTGNVAEQLREACPGGVDVYFD  106 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-CCS---EEEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-cce---EEeeccchhHHHHHHHHhccCceEEEe
Confidence            468999999999999999998889986554 556655554443221 221   1235555443321  1 1237999999


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +.|..                   -....++.++. .+|++.++.++.+.
T Consensus       107 ~vGg~-------------------~~~~~~~~l~~-~G~iv~~G~~s~~~  136 (187)
T d1vj1a2         107 NVGGD-------------------ISNTVISQMNE-NSHIILCGQISQYN  136 (187)
T ss_dssp             SSCHH-------------------HHHHHHTTEEE-EEEEEEC-------
T ss_pred             cCCch-------------------hHHHHhhhccc-cccEEEeccccccc
Confidence            98731                   12333444443 35888887766653

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.00074  Score=51.25  Aligned_cols=64  Identities=17%  Similarity=0.229  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|.+.|+ |.+|.++++.|++.| ++|++.+|++++.+.+.++.   ++... .   +.+.     +.++|+||.+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~---~~~~~-~---~~~~-----v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL---GVETS-A---TLPE-----LHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT---CCEEE-S---SCCC-----CCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc---ccccc-c---cccc-----ccccceEEEec
Confidence            47999985 999999999999887 99999999998887775432   23322 1   1222     34589999775

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00086  Score=53.08  Aligned_cols=39  Identities=21%  Similarity=0.180  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhh
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT  120 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~  120 (333)
                      +-++|.|.|| |.+|+.++..++..|++|++++++++..+
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   41 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence            4579999997 99999999999999999999999986543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.73  E-value=0.0005  Score=53.55  Aligned_cols=96  Identities=20%  Similarity=0.138  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhh--cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~--~~~d~v  155 (333)
                      ++.+|+|.|+ |.+|...++.+...|+ +|+++++++++.+...+.  +.. ++  .|..+++..+.  +..  .++|+|
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l--Ga~-~~--i~~~~~~~~~~v~~~t~g~G~D~v  100 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY--GAT-DI--LNYKNGHIEDQVMKLTNGKGVDRV  100 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH--TCS-EE--ECGGGSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh--Ccc-cc--ccccchhHHHHHHHHhhccCcceE
Confidence            3568999986 9999999999998996 799999988776654421  211 22  24434322220  222  259999


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      |.++|...                  .....++.++. -++++.++
T Consensus       101 id~~g~~~------------------~~~~a~~~~~~-~G~iv~~G  127 (174)
T d1jqba2         101 IMAGGGSE------------------TLSQAVKMVKP-GGIISNIN  127 (174)
T ss_dssp             EECSSCTT------------------HHHHHHHHEEE-EEEEEECC
T ss_pred             EEccCCHH------------------HHHHHHHHHhc-CCEEEEEe
Confidence            99998531                  12344556654 35777765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.72  E-value=0.00078  Score=51.10  Aligned_cols=65  Identities=20%  Similarity=0.137  Sum_probs=48.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |+|.|.| .|.+|+.+++.|+++|++|++.+|+.++.......    ++.     +  .++.. ++++.+|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~-----~--~~~~~-e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR----TVG-----V--TETSE-EDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH----HHT-----C--EECCH-HHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh----ccc-----c--cccHH-HHHhhcCeEEEEec
Confidence            4789997 69999999999999999999998877665443321    111     1  12455 67889999999874

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.70  E-value=0.001  Score=51.05  Aligned_cols=75  Identities=15%  Similarity=0.179  Sum_probs=49.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCch--hhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~--~~~~~~d~vi~~  158 (333)
                      .+.+|+|.|+ |.+|...++.+...|++|+++++++++.+...+.  +.. ++  .|..+.+..+.  +...+.+.+|.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~--Ga~-~~--i~~~~~~~~~~~~~~~~g~~~~i~~  100 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKL--GAS-LT--VNARQEDPVEAIQRDIGGAHGVLVT  100 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TCS-EE--EETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhcc--Ccc-cc--ccccchhHHHHHHHhhcCCcccccc
Confidence            3568999986 9999999998888899999999998887655432  221 22  24444443331  223456666666


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      ++.
T Consensus       101 ~~~  103 (166)
T d1llua2         101 AVS  103 (166)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.66  E-value=0.003  Score=50.07  Aligned_cols=70  Identities=16%  Similarity=0.154  Sum_probs=52.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-CCcEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVI  156 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-~~d~vi  156 (333)
                      .++.+++|+|-| -|.+|+++++.|.+.|++|++.+.+.........    .+.+.+        ..+ +++. .||+++
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~----~g~~~~--------~~~-~~~~~~~DI~i   88 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA----LGHTAV--------ALE-DVLSTPCDVFA   88 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCEEC--------CGG-GGGGCCCSEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh----hccccc--------Ccc-ccccccceeee
Confidence            357889999998 7999999999999999999999988776655432    122221        223 3343 799999


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      =||..
T Consensus        89 PcA~~   93 (201)
T d1c1da1          89 PCAMG   93 (201)
T ss_dssp             ECSCS
T ss_pred             ccccc
Confidence            98853

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.65  E-value=0.00095  Score=52.61  Aligned_cols=103  Identities=17%  Similarity=0.245  Sum_probs=60.1

Q ss_pred             CCeEEE-EcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCce-EEEEccCCCcCCCch---hh----hcCC
Q 019935           82 SKLVLV-AGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDP---AI----FEGV  152 (333)
Q Consensus        82 ~~~vlV-tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~D~~d~~~~~~---~~----~~~~  152 (333)
                      +.+++| +||+|.+|...++.....|++|++++|+.++.++..+....-++ .++.-|-.+...+..   +.    -.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~v  108 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEA  108 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCE
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCc
Confidence            345666 69999999999999888999999999887654432211101122 122221111111210   11    1369


Q ss_pred             cEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccc
Q 019935          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (333)
Q Consensus       153 d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~  204 (333)
                      |+++++.|..                   .....+++++.+ +++|.++.++
T Consensus       109 dvv~D~vg~~-------------------~~~~~~~~l~~~-G~~v~~G~~~  140 (189)
T d1gu7a2         109 KLALNCVGGK-------------------SSTGIARKLNNN-GLMLTYGGMS  140 (189)
T ss_dssp             EEEEESSCHH-------------------HHHHHHHTSCTT-CEEEECCCCS
T ss_pred             eEEEECCCcc-------------------hhhhhhhhhcCC-cEEEEECCcc
Confidence            9999998631                   224455666553 5888776544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.62  E-value=0.00039  Score=53.33  Aligned_cols=76  Identities=13%  Similarity=0.155  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ...+|+|.|+ |-.|..-++.+.+.|.+|++++.+.++.+.+.... ...++..   ..+.+.++ +.+..+|+||.++-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~-~~~~~~~---~~~~~~l~-~~~~~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-GSRVELL---YSNSAEIE-TAVAEADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGSEEE---ECCHHHHH-HHHHTCSEEEECCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhh-cccceee---hhhhhhHH-HhhccCcEEEEeee
Confidence            3468999995 99999999999999999999999998877665332 2333333   33455666 77889999999986


Q ss_pred             CC
Q 019935          161 TT  162 (333)
Q Consensus       161 ~~  162 (333)
                      +.
T Consensus       105 ip  106 (168)
T d1pjca1         105 VP  106 (168)
T ss_dssp             CT
T ss_pred             cC
Confidence            54

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.61  E-value=0.0015  Score=50.53  Aligned_cols=74  Identities=19%  Similarity=0.227  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCc-CCCchhhh-----cCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-----EGVT  153 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~-~~~~~~~~-----~~~d  153 (333)
                      .+.+|||.|+ |++|...++.+...|. .|++.++++++.+..++.  +.. +++  |..+. +.+. +.+     .++|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l--Ga~-~~i--~~~~~~~~~~-~~~~~~~~~g~D  100 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF--GAT-ECI--NPQDFSKPIQ-EVLIEMTDGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH--TCS-EEE--CGGGCSSCHH-HHHHHHTTSCBS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh--CCc-EEE--eCCchhhHHH-HHHHHHcCCCCc
Confidence            4568999997 6899999999999995 566677777766544321  211 122  33222 2333 222     4799


Q ss_pred             EEEEcCCC
Q 019935          154 HVICCTGT  161 (333)
Q Consensus       154 ~vi~~a~~  161 (333)
                      +||.+.|.
T Consensus       101 ~vid~~G~  108 (176)
T d2fzwa2         101 YSFECIGN  108 (176)
T ss_dssp             EEEECSCC
T ss_pred             EeeecCCC
Confidence            99999975

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.61  E-value=0.0064  Score=44.47  Aligned_cols=90  Identities=17%  Similarity=0.109  Sum_probs=59.2

Q ss_pred             CCCCeEEEEcCC---ChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGS---GGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGat---G~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      +..++|.|.|+|   +..|..+.+.|.+.| ++|+.+....+...         ++       .-..++. ++-..+|.+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~---------G~-------~~y~sl~-dlp~~vDlv   68 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ---------GV-------KAYKSVK-DIPDEIDLA   68 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET---------TE-------ECBSSTT-SCSSCCSEE
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC---------Ce-------Eeecchh-hcCCCCceE
Confidence            456799999999   999999999998766 68988876543221         11       1122333 333568988


Q ss_pred             EEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHH-hcCCCCCeEEEEecccc
Q 019935          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIVLVSSVGV  205 (333)
Q Consensus       156 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-a~~~~~~~~v~~SS~~~  205 (333)
                      +-+...                   ..+..+++ +.+.|++.++.+|+...
T Consensus        69 vi~vp~-------------------~~~~~~~~~~~~~g~~~~vi~s~Gf~  100 (129)
T d2csua1          69 IIVVPK-------------------RFVKDTLIQCGEKGVKGVVIITAGFG  100 (129)
T ss_dssp             EECSCH-------------------HHHHHHHHHHHHHTCCEEEECCCSST
T ss_pred             EEecCh-------------------HHhHHHHHHHHHcCCCEEEEeccccc
Confidence            877642                   23445555 44568998888876543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.58  E-value=0.0012  Score=51.71  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=27.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLR  114 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R  114 (333)
                      +..+|.|.||||+.|..+++.|.++- .++..+..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            34589999999999999999999874 57666653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.58  E-value=0.0011  Score=51.44  Aligned_cols=74  Identities=15%  Similarity=0.101  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeE-EEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh----cCCcEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKS-RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V-~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~----~~~d~v  155 (333)
                      .+.+|+|.|+ |.+|...++.+...|+++ ++.++++++.+...+.  +. .++  .|..+++..+ +..    .++|+|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~--Ga-~~~--i~~~~~~~~~-~i~~~t~gg~D~v  100 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL--GA-THV--INSKTQDPVA-AIKEITDGGVNFA  100 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH--TC-SEE--EETTTSCHHH-HHHHHTTSCEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc--CC-eEE--EeCCCcCHHH-HHHHHcCCCCcEE
Confidence            4568999997 999999999998888765 5567777666554421  11 123  3444543333 221    268999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      |.+.|.
T Consensus       101 id~~G~  106 (174)
T d1f8fa2         101 LESTGS  106 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCc
Confidence            999985

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.57  E-value=0.0005  Score=53.54  Aligned_cols=75  Identities=12%  Similarity=-0.011  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |.+|.|.||||++|..+++.|.++- .++..+..+....+.+...  .+... -..++ ...+.+ ....++|+|+.+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~--~p~~~-~~~~~-~~~~~~-~~~~~~dvvf~a~p   75 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEI--FPSTL-ENSIL-SEFDPE-KVSKNCDVLFTALP   75 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHH--CGGGC-CCCBC-BCCCHH-HHHHHCSEEEECCS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccccc--Cchhh-ccccc-cccCHh-HhccccceEEEccc
Confidence            4689999999999999999998864 5776665433222222110  11110 00111 111222 34567999998875


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus        76 ~   76 (176)
T d1vkna1          76 A   76 (176)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.56  E-value=0.0015  Score=51.71  Aligned_cols=68  Identities=13%  Similarity=0.093  Sum_probs=52.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.+++|.|.| .|.||+.+++.|...|.+|+++++........              +....++++ +++..+|+|+.
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--------------~~~~~~~l~-~~l~~sDii~~  102 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK--------------KGYYVDSLD-DLYKQADVISL  102 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--------------TTCBCSCHH-HHHHHCSEEEE
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc--------------ceeeecccc-ccccccccccc
Confidence            356789999999 69999999999999999999998765433221              112235677 78889999998


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       103 ~~pl  106 (197)
T d1j4aa1         103 HVPD  106 (197)
T ss_dssp             CSCC
T ss_pred             cCCc
Confidence            8754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.52  E-value=0.0015  Score=49.59  Aligned_cols=24  Identities=29%  Similarity=0.497  Sum_probs=21.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI  107 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~  107 (333)
                      +|.|.||||++|..+++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988754

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=96.52  E-value=0.0024  Score=50.27  Aligned_cols=71  Identities=10%  Similarity=0.071  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ....++++.|.| .|.||+.+++.|...|.+|.+.++..........           ......++++ +++..+|+|+.
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~~~~~~~~l~-~ll~~sD~v~l  109 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-----------YQATFHDSLD-SLLSVSQFFSL  109 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-----------HTCEECSSHH-HHHHHCSEEEE
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc-----------ccccccCCHH-HHHhhCCeEEe
Confidence            456789999999 5999999999999999999999876543322110           0112235677 78889999988


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       110 ~~pl  113 (191)
T d1gdha1         110 NAPS  113 (191)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            7754

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.50  E-value=0.00079  Score=52.63  Aligned_cols=31  Identities=23%  Similarity=0.265  Sum_probs=26.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CCeEEEE
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLL  112 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~  112 (333)
                      |++|.|.||||++|..|++.|.++ ..++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            468999999999999999999997 5677554

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.47  E-value=0.0035  Score=48.54  Aligned_cols=41  Identities=17%  Similarity=0.019  Sum_probs=36.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~  124 (333)
                      -+|+|.|| |-.|.+-++.....|++|.+++.++++.+.+.+
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            48999996 999999999999999999999999888777653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.27  E-value=0.0032  Score=49.61  Aligned_cols=71  Identities=13%  Similarity=0.027  Sum_probs=52.8

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ...+.+++|.|.| .|.||+.+++.|...|.+|++.++.........            .++....+++ +++..+|+|+
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------------~~~~~~~~l~-~ll~~sD~i~  109 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA------------LGLQRVSTLQ-DLLFHSDCVT  109 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH------------HTCEECSSHH-HHHHHCSEEE
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh------------hccccccchh-hccccCCEEE
Confidence            3457889999999 699999999999999999999998654322111            1122234677 7888899998


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      .+...
T Consensus       110 ~~~pl  114 (193)
T d1mx3a1         110 LHCGL  114 (193)
T ss_dssp             ECCCC
T ss_pred             Eeecc
Confidence            88754

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.0063  Score=47.63  Aligned_cols=98  Identities=11%  Similarity=0.050  Sum_probs=65.0

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+++|+|.| .|.||+.+++.|...|.+|+..++.......       ..        ...+.++ ++++.+|+|+.
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------~~--------~~~~~l~-ell~~sDii~i  102 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-------NA--------TQVQHLS-DLLNMSDVVSL  102 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-------TC--------EECSCHH-HHHHHCSEEEE
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-------hh--------hhhhhHH-HHHhhccceee
Confidence            356788999998 7999999999999999999999886432211       01        1124677 78889999988


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEeccccc
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~  206 (333)
                      +.....         ....-+|    ...++.++.+ .-||++|=....
T Consensus       103 ~~plt~---------~T~~li~----~~~l~~mk~~-a~lIN~aRG~lv  137 (188)
T d1sc6a1         103 HVPENP---------STKNMMG----AKEISLMKPG-SLLINASRGTVV  137 (188)
T ss_dssp             CCCSST---------TTTTCBC----HHHHHHSCTT-EEEEECSCSSSB
T ss_pred             cccCCc---------chhhhcc----HHHHhhCCCC-CEEEEcCcHHhh
Confidence            886532         1111122    4556666553 367776655543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.24  E-value=0.0019  Score=49.57  Aligned_cols=74  Identities=14%  Similarity=0.128  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCC---CchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~---~~~~~~~~~d~vi~  157 (333)
                      .+.+|+|.|+ |.+|...++.+...|++|+++++++++.+...+    -++..+ .|..+.+.   +. ....+.|.+|.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~----~Ga~~~-~~~~~~~~~~~~~-~~~~~~~~~v~   99 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGADLV-VNPLKEDAAKFMK-EKVGGVHAAVV   99 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCSEE-ECTTTSCHHHHHH-HHHSSEEEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh----cCccee-cccccchhhhhcc-cccCCCceEEe
Confidence            3568999975 999999999998899999999999888766543    233322 23333222   22 23346677777


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +++.
T Consensus       100 ~~~~  103 (168)
T d1rjwa2         100 TAVS  103 (168)
T ss_dssp             SSCC
T ss_pred             ecCC
Confidence            7653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.23  E-value=0.0039  Score=45.23  Aligned_cols=35  Identities=17%  Similarity=0.143  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4578999985 9999999999999999999998865

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.23  E-value=0.0017  Score=51.04  Aligned_cols=39  Identities=15%  Similarity=0.055  Sum_probs=34.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~  121 (333)
                      -++|.|.|+ |.+|+.++..++..|++|++++++++..+.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            368999997 999999999999999999999999866443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.22  E-value=0.0035  Score=45.35  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            468999995 99999999999999999999998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.22  E-value=0.006  Score=45.80  Aligned_cols=36  Identities=31%  Similarity=0.426  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      .+++|+|||+|| |.+|..-++.|++.|.+|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            467899999997 999999999999999999999753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.21  E-value=0.0036  Score=44.95  Aligned_cols=35  Identities=26%  Similarity=0.303  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            368999995 99999999999999999999998653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.04  E-value=0.0039  Score=44.80  Aligned_cols=34  Identities=21%  Similarity=0.284  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      .++|+|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            468999995 9999999999999999999999865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.04  E-value=0.0051  Score=48.21  Aligned_cols=72  Identities=10%  Similarity=-0.023  Sum_probs=52.1

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEE
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi  156 (333)
                      ..++.++++.|.| .|.||+.+++.|...|.+|...+|..........           ..+....+++ +.++.+|+|+
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-----------~~~~~~~~l~-~~l~~sD~v~  105 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-----------LNLTWHATRE-DMYPVCDVVT  105 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-----------HTCEECSSHH-HHGGGCSEEE
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc-----------ccccccCCHH-HHHHhccchh
Confidence            3456788999999 6999999999999999999999986433222110           0122235666 7788899988


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      .+...
T Consensus       106 ~~~pl  110 (188)
T d2naca1         106 LNCPL  110 (188)
T ss_dssp             ECSCC
T ss_pred             hcccc
Confidence            87754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.02  E-value=0.005  Score=47.28  Aligned_cols=83  Identities=14%  Similarity=-0.064  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccC--CCcCCCchhhhcCCcEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT--RNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~--~d~~~~~~~~~~~~d~v  155 (333)
                      .++.+|+|+|.|-+.-+|+.++..|+++|+.|+.+..+...........  .-......|+  ..++.++ +....+|+|
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lk-~~~~~aDIv  101 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL--KLNKHHVEDLGEYSEDLLK-KCSLDSDVV  101 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS--SCCCCEEEEEEECCHHHHH-HHHHHCSEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccce--eeeeeccccccccchhHHh-hccccCCEE
Confidence            3788999999999999999999999999999988765432111000000  0000011121  1122344 445578999


Q ss_pred             EEcCCCCC
Q 019935          156 ICCTGTTA  163 (333)
Q Consensus       156 i~~a~~~~  163 (333)
                      |..+|...
T Consensus       102 IsavG~p~  109 (171)
T d1edza1         102 ITGVPSEN  109 (171)
T ss_dssp             EECCCCTT
T ss_pred             EEccCCCc
Confidence            99988654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.00  E-value=0.0043  Score=47.76  Aligned_cols=73  Identities=22%  Similarity=0.256  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|+|.|+ |.+|...++.+...|. .|+++++++++.+...+.  + ..+++  |..+ +.++ ...     .++|+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~--g-a~~~i--~~~~-~~~~-~~~~~~~~~g~d~  103 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL--G-ADHVV--DARR-DPVK-QVMELTRGRGVNV  103 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT--T-CSEEE--ETTS-CHHH-HHHHHTTTCCEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc--c-cceee--cCcc-cHHH-HHHHhhCCCCceE
Confidence            3568999985 9999999999888885 667778887776655432  1 12333  3222 2233 222     36899


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      ||.++|.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999985

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.99  E-value=0.022  Score=40.54  Aligned_cols=81  Identities=11%  Similarity=0.226  Sum_probs=52.3

Q ss_pred             CeEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           83 KLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      |+|.|.|++   +..|..+.+.|++.||+|+.+..+.+...                .+.-..++. ++-..+|.++-+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~----------------G~~~y~sl~-~lp~~~D~vvi~v   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE----------------GLKCYRSVR-ELPKDVDVIVFVV   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEECBSSGG-GSCTTCCEEEECS
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc----------------Cccccccch-hccccceEEEEEe
Confidence            579999988   77999999999999999888764432211                111123344 3335689888765


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHH-hcCCCCCeEEE
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIVL  199 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-a~~~~~~~~v~  199 (333)
                      ..                   ..+..+++ +++.|++.+++
T Consensus        65 p~-------------------~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          65 PP-------------------KVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             CH-------------------HHHHHHHHHHHHTTCCEEEE
T ss_pred             CH-------------------HHHHHHHHHHHhcCCceEEe
Confidence            43                   23344554 44568876654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.97  E-value=0.0046  Score=44.77  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            368999995 9999999999999999999999865

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.93  E-value=0.0067  Score=47.33  Aligned_cols=70  Identities=19%  Similarity=0.088  Sum_probs=51.9

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ....++++.|.| .|.||+.+++.|...|.+|++.++...+......     .+        ...+++ +++..+|+|+.
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~-----~~--------~~~~l~-ell~~sDiv~~  104 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL-----GI--------ELLSLD-DLLARADFISV  104 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH-----TC--------EECCHH-HHHHHCSEEEE
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc-----Cc--------eeccHH-HHHhhCCEEEE
Confidence            356788999999 6999999999999999999999987654433211     11        123566 78888999988


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +....
T Consensus       105 ~~Plt  109 (184)
T d1ygya1         105 HLPKT  109 (184)
T ss_dssp             CCCCS
T ss_pred             cCCCC
Confidence            77543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.90  E-value=0.0083  Score=47.22  Aligned_cols=74  Identities=19%  Similarity=0.177  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhh---h--cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~---~--~~~d~  154 (333)
                      .+.+|||.|+ |.+|...+..+...|. +|+++++++++.+...+    -++..+ .|-.+. ++.++.   .  .++|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~Ga~~~-~~~~~~-~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFEIA-DLSLDT-PLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCEEE-ETTSSS-CHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----ccccEE-EeCCCc-CHHHHHHHHhCCCCcEE
Confidence            4568999985 9999888888877775 78888998877665442    233332 233332 332122   2  26899


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      +|.+.|.
T Consensus        98 vid~vG~  104 (195)
T d1kola2          98 AVDAVGF  104 (195)
T ss_dssp             EEECCCT
T ss_pred             EEECccc
Confidence            9999985

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.0054  Score=43.91  Aligned_cols=33  Identities=21%  Similarity=0.174  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ++|+|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            68999995 9999999999999999999999865

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.86  E-value=0.005  Score=44.58  Aligned_cols=33  Identities=18%  Similarity=0.208  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      .++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            357999995 999999999999999999999886

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.85  E-value=0.024  Score=42.62  Aligned_cols=38  Identities=26%  Similarity=0.169  Sum_probs=31.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      ||.+.| .|.+|+.+++.|++.|+.| +.+|+.++...+.
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~   39 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQ   39 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHH
Confidence            588999 6999999999999999865 5778877766554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.84  E-value=0.008  Score=43.20  Aligned_cols=34  Identities=15%  Similarity=0.056  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            478999995 9999999999999999999999865

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.80  E-value=0.014  Score=44.09  Aligned_cols=70  Identities=29%  Similarity=0.378  Sum_probs=54.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      .+.+|+++|.| =|.+|+.+++.|...|.+|+++..+|-++-+..    ..++++        ..++ ++++..|++|-+
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~----mdGf~v--------~~~~-~a~~~aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV----MEGFNV--------VTLD-EIVDKGDFFITC   85 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH----TTTCEE--------CCHH-HHTTTCSEEEEC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH----hcCCcc--------Cchh-HccccCcEEEEc
Confidence            46789999999 599999999999999999999999985543322    334443        3345 677788999998


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      .|-.
T Consensus        86 TGn~   89 (163)
T d1v8ba1          86 TGNV   89 (163)
T ss_dssp             CSSS
T ss_pred             CCCC
Confidence            8864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.79  E-value=0.0043  Score=49.10  Aligned_cols=67  Identities=16%  Similarity=0.161  Sum_probs=50.3

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++.+++|.|.| .|.||+.+++.|...|.+|+++++......       ...+        +..+++ +++..+|+|+.
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~--------~~~~l~-~l~~~~D~v~~  103 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-------HPDF--------DYVSLE-DLFKQSDVIDL  103 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC-------CTTC--------EECCHH-HHHHHCSEEEE
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccchhh-------hcch--------hHHHHH-HHHHhccccee
Confidence            356789999999 699999999999999999999998654321       1111        123566 77888999988


Q ss_pred             cCCC
Q 019935          158 CTGT  161 (333)
Q Consensus       158 ~a~~  161 (333)
                      +...
T Consensus       104 ~~pl  107 (199)
T d1dxya1         104 HVPG  107 (199)
T ss_dssp             CCCC
T ss_pred             eecc
Confidence            7754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.0061  Score=44.26  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ++++|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            68999995 9999999999999999999999965

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.76  E-value=0.0054  Score=44.33  Aligned_cols=34  Identities=21%  Similarity=0.363  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      ++++|.|| |++|-.++..|.+.|++|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            68999995 99999999999999999999998653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.74  E-value=0.0099  Score=43.31  Aligned_cols=69  Identities=17%  Similarity=0.089  Sum_probs=48.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEE-EcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc-----CCcEEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTHVI  156 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~-----~~d~vi  156 (333)
                      ++|.|.|++|.+|+.|++.+.+.|+++++. +++...  .+.    ...   +..|.+.|+.+. +.++     ++-.|+
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~~----~~D---VvIDFS~p~~~~-~~l~~~~~~~~p~Vi   70 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--ELD----SPD---VVIDFSSPEALP-KTVDLCKKYRAGLVL   70 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--ECS----CCS---EEEECSCGGGHH-HHHHHHHHHTCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--Hhc----cCC---EEEEecCHHHHH-HHHHHHHhcCCCEEE
Confidence            479999999999999999999999987764 443321  111    222   356999988877 4443     677777


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      -..|.
T Consensus        71 GTTG~   75 (128)
T d1vm6a3          71 GTTAL   75 (128)
T ss_dssp             CCCSC
T ss_pred             EcCCC
Confidence            76665

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.71  E-value=0.0067  Score=43.28  Aligned_cols=33  Identities=15%  Similarity=0.220  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ++++|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            68999995 9999999999999999999999865

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.69  E-value=0.0079  Score=48.81  Aligned_cols=35  Identities=31%  Similarity=0.388  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ..++|+|.|| |..|...+..|+++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3468999995 9999999999999999999999864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.028  Score=42.89  Aligned_cols=43  Identities=19%  Similarity=0.118  Sum_probs=37.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~  121 (333)
                      ++.+|+|+|.|-+.-+|+.++..|+++|+.|+++.........
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            5789999999999999999999999999999998876544433

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.64  E-value=0.0058  Score=43.07  Aligned_cols=39  Identities=15%  Similarity=-0.003  Sum_probs=32.2

Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        77 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ..+..+|+|+|.| +|.-|.-++..|+..+.+|+...|..
T Consensus        27 ~~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            3456789999999 48999999999999887877776654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.0049  Score=47.02  Aligned_cols=75  Identities=20%  Similarity=0.230  Sum_probs=44.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC-CCeEEE-EEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+|.|.|++|.+|+.+++.+.+. +.++++ ++|...... .......+..    ..++.-.++++ ..++.+|+||..
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~----~~~~~~~~~~~-~~~~~~DViIDF   78 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG----KTGVTVQSSLD-AVKDDFDVFIDF   78 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS----CCSCCEESCST-TTTTSCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc----cCCceeeccHH-HHhcccceEEEe
Confidence            358999999999999999999876 677655 444332211 0000000000    11122233455 567789999998


Q ss_pred             CCC
Q 019935          159 TGT  161 (333)
Q Consensus       159 a~~  161 (333)
                      .-+
T Consensus        79 s~p   81 (162)
T d1diha1          79 TRP   81 (162)
T ss_dssp             SCH
T ss_pred             ccH
Confidence            643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.50  E-value=0.0091  Score=43.83  Aligned_cols=35  Identities=29%  Similarity=0.428  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .++|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            468999995 99999999999999999999998654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.42  E-value=0.042  Score=40.39  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=30.3

Q ss_pred             CCeEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           82 SKLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        82 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      .|+|.|.|++   +..|..+++.|.+.||+|+.+...
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            4789999998   789999999999999999888654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.39  E-value=0.018  Score=44.11  Aligned_cols=75  Identities=17%  Similarity=0.141  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTH  154 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~  154 (333)
                      .+.+|+|.|+ |.+|...+..+...| .+|+++++++++.+...+.    ++.. ..|..+.+....+..     .++|+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~----GAd~-~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GATD-FVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCCE-EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc----CCcE-EEcCCCcchhHHHHHHhhccCCcce
Confidence            4568999996 668888888787776 5788899998887765532    2221 124444433321221     37999


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999985

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.28  E-value=0.0088  Score=39.34  Aligned_cols=37  Identities=27%  Similarity=0.241  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~  119 (333)
                      +|+|.|.| +|.+|+-++.+-.+.|++|++++-+++..
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            36899999 59999999999999999999999776543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.28  E-value=0.02  Score=46.04  Aligned_cols=73  Identities=14%  Similarity=0.087  Sum_probs=52.6

Q ss_pred             CCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        78 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .++++++|+|-| -|.+|+++++.|.+.|++|++.+.+......+...   .+...     .+++++.   -..||+++=
T Consensus        35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~---~g~~~-----~~~~~~~---~~~cDIl~P  102 (230)
T d1leha1          35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE---EGADA-----VAPNAIY---GVTCDIFAP  102 (230)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH---HCCEE-----CCGGGTT---TCCCSEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh---cCCcc-----cCCcccc---cccccEecc
Confidence            357889999999 69999999999999999999998887666554431   12222     1222222   147999999


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      ||-..
T Consensus       103 cA~~~  107 (230)
T d1leha1         103 CALGA  107 (230)
T ss_dssp             CSCSC
T ss_pred             ccccc
Confidence            99653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.17  E-value=0.011  Score=42.80  Aligned_cols=34  Identities=15%  Similarity=0.152  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            368999995 9999999999999999999998865

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.16  E-value=0.0081  Score=43.43  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            368999995 99999999999999999999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.14  E-value=0.03  Score=41.02  Aligned_cols=71  Identities=21%  Similarity=0.244  Sum_probs=47.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEE-EEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-----cCCcEEE
Q 019935           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHVI  156 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~-~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-----~~~d~vi  156 (333)
                      ||.|.|++|.+|+.+++.+.+. ++++.+ +++.. ......    ..+.. +..|++.|+.+. +.+     .++-.|+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~----~~~~D-vvIDFS~p~~~~-~~~~~~~~~~~~~Vi   73 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLT----DGNTE-VVIDFTHPDVVM-GNLEFLIDNGIHAVV   73 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHH----TTTCS-EEEECCCTTTHH-HHHHHHHHTTCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhc----cccCC-EEEEcccHHHHH-HHHHHHHhcCCCEEE
Confidence            6899999999999999988775 677766 44432 222222    12222 357999998877 443     3677887


Q ss_pred             EcCCC
Q 019935          157 CCTGT  161 (333)
Q Consensus       157 ~~a~~  161 (333)
                      -..|.
T Consensus        74 GTTG~   78 (135)
T d1yl7a1          74 GTTGF   78 (135)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            66654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.10  E-value=0.019  Score=41.02  Aligned_cols=36  Identities=17%  Similarity=0.212  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .+++|+|.|| |++|..++..|.+.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3579999995 99999999999999999999998653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.06  E-value=0.024  Score=43.72  Aligned_cols=37  Identities=22%  Similarity=0.240  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ....|+|+|.|| |..|-..+..|+++||+|+++.+++
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345689999995 9999999999999999999999865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.01  E-value=0.033  Score=42.17  Aligned_cols=38  Identities=21%  Similarity=0.156  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      +..+|+|+|.|-+.-+|+.++..|.++|+.|+++....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            56889999999999999999999999999998886543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.88  E-value=0.017  Score=47.02  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .+||+|.|| |..|..++..|+++|++|+++.|+++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999996 99999999999999999999998654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.75  E-value=0.015  Score=45.13  Aligned_cols=34  Identities=12%  Similarity=0.129  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~  116 (333)
                      ++||+|.|| |..|...|..|+++|+ +|+++.|++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            478999995 9999999999999998 599999865

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.68  E-value=0.031  Score=43.00  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=44.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEc-Ccchhhh-hhccCCCCceEE--------EEccCCCcCCCchhhhcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLR-DPEKATT-LFGKQDEETLQV--------CKGDTRNPKDLDPAIFEG  151 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R-~~~~~~~-~~~~~~~~~~~~--------v~~D~~d~~~~~~~~~~~  151 (333)
                      -+|.|-| .|.||+.+++.|.++ +.+|+++.. .+..... +...  ......        -...+.-...+. ..+.+
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~g~~~-~~~~~   77 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRR--GIRIYVPQQSIKKFEESGIPVAGTVE-DLIKT   77 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHT--TCCEECCGGGHHHHHTTTCCCCCCHH-HHHHH
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhccc--CcceeccCccceeccccceecCCchh-hhhhc
Confidence            4799998 799999999999987 478887754 3322211 1111  111100        001111122344 55668


Q ss_pred             CcEEEEcCCCC
Q 019935          152 VTHVICCTGTT  162 (333)
Q Consensus       152 ~d~vi~~a~~~  162 (333)
                      +|+||-|.|..
T Consensus        78 vDiViecTG~f   88 (178)
T d1b7go1          78 SDIVVDTTPNG   88 (178)
T ss_dssp             CSEEEECCSTT
T ss_pred             CCEEEECCCCc
Confidence            99999999864

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.68  E-value=0.12  Score=35.20  Aligned_cols=71  Identities=17%  Similarity=0.203  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCCChHH-HHHHHHHHhCCCeEEEEEcCcchhh-hhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG-~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+.++|.+.|- |++| ++||+.|.++|++|.+.++...... .+.    ..++.+..++-      . +.+.+.|.||.
T Consensus         6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~----~~Gi~v~~g~~------~-~~i~~~d~vV~   73 (96)
T d1p3da1           6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA----QAGAKIYIGHA------E-EHIEGASVVVV   73 (96)
T ss_dssp             TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH----HTTCEEEESCC------G-GGGTTCSEEEE
T ss_pred             hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH----HCCCeEEECCc------c-ccCCCCCEEEE
Confidence            34578999995 5666 8889999999999999998754433 333    33555544331      2 23467899988


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      ..++.
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            88763

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.037  Score=48.83  Aligned_cols=76  Identities=16%  Similarity=0.240  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhhh-----------------------hccCCCCceEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-----------------------FGKQDEETLQVCKG  136 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~~v~~  136 (333)
                      ...+|||.|+ |++|.++++.|+..|. ++++++.+.=....+                       ....+.-++..+..
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  114 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  114 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence            3468999997 8899999999999996 788888653111111                       11111234455555


Q ss_pred             cCCCcCCCchhhhcCCcEEEEcCC
Q 019935          137 DTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus       137 D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      ++.+.  -. ..+.+.|+||.+..
T Consensus       115 ~i~~~--~~-~~~~~~DlVi~~~D  135 (426)
T d1yovb1         115 KIQDF--ND-TFYRQFHIIVCGLD  135 (426)
T ss_dssp             CGGGB--CH-HHHTTCSEEEECCS
T ss_pred             cccch--HH-HHHHhcchheeccC
Confidence            55432  23 67889999998763

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.58  E-value=0.085  Score=35.39  Aligned_cols=69  Identities=13%  Similarity=0.083  Sum_probs=46.7

Q ss_pred             CeEEEEcCCChHH-HHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCCC
Q 019935           83 KLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (333)
Q Consensus        83 ~~vlVtGatG~iG-~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~~  161 (333)
                      ++|.++|- |++| +.||+.|.++|+.|.+.++........++   ..++.+..+  .+++.+     .++|.||...++
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~---~~Gi~i~~g--h~~~~i-----~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR---KLGIPIFVP--HSADNW-----YDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH---HTTCCEESS--CCTTSC-----CCCSEEEECTTC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH---HCCCeEEee--eccccc-----CCCCEEEEecCc
Confidence            57888886 5555 48899999999999999998654333222   345555433  233333     468999998876


Q ss_pred             C
Q 019935          162 T  162 (333)
Q Consensus       162 ~  162 (333)
                      .
T Consensus        71 ~   71 (89)
T d1j6ua1          71 R   71 (89)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.40  E-value=0.022  Score=43.30  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~  116 (333)
                      +|+|+|.|| |++|-.++..|.+.++  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999995 9999999999999874  788887665

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.23  E-value=0.022  Score=46.93  Aligned_cols=34  Identities=21%  Similarity=0.229  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      +|+|+|.|| |.-|...+..|+++|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            478999995 9999999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.19  E-value=0.022  Score=44.53  Aligned_cols=39  Identities=28%  Similarity=0.219  Sum_probs=33.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~  123 (333)
                      |+|.|.| .|++|..++..| ++|++|++++-++++.+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            5789997 799999999766 57999999999988877664

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.18  E-value=0.038  Score=45.85  Aligned_cols=35  Identities=23%  Similarity=0.137  Sum_probs=31.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      ++++++|+|-| -|.+|+++++.|.+.|++|+.++-
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            57789999999 599999999999999999998764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.18  E-value=0.072  Score=40.62  Aligned_cols=76  Identities=16%  Similarity=0.158  Sum_probs=45.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEE-cCcchhh-hhhccCCCCceEEEEcc-----------CCCcCCCch
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLL-RDPEKAT-TLFGKQDEETLQVCKGD-----------TRNPKDLDP  146 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~-R~~~~~~-~~~~~~~~~~~~~v~~D-----------~~d~~~~~~  146 (333)
                      |..+|.|-| -|.||+.+++.|..+. .+|+.+. .++.... .+..    .+......+           +.....+. 
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   74 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE----LGIPVYAASEEFIPRFEKEGFEVAGTLN-   74 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH----TTCCEEESSGGGHHHHHHHTCCCSCBHH-
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh----cCceeecccccceeeecccCccccchhh-
Confidence            346899999 5999999999998764 6777665 3333222 2221    111111111           11122333 


Q ss_pred             hhhcCCcEEEEcCCCC
Q 019935          147 AIFEGVTHVICCTGTT  162 (333)
Q Consensus       147 ~~~~~~d~vi~~a~~~  162 (333)
                      .++.++|+|+-|.|..
T Consensus        75 ~~~~~vDvViEcTG~f   90 (172)
T d2czca2          75 DLLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHHTTCSEEEECCSTT
T ss_pred             hhhccCCEEEECCCCC
Confidence            4567899999999874

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.08  E-value=0.022  Score=46.67  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=29.0

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.|| |.+|..++.+|+++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999995 9999999999999999999999864

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.03  E-value=0.031  Score=47.25  Aligned_cols=34  Identities=21%  Similarity=0.352  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      .|+|+|.|| |.-|...|..|+++|++|.++.++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            579999995 9999999999999999999998765

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.082  Score=42.74  Aligned_cols=36  Identities=31%  Similarity=0.358  Sum_probs=30.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~  116 (333)
                      +...+|+|.| .|++|++++..|++.|. ++++++.+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            4557999999 59999999999999995 788887543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.90  E-value=0.061  Score=41.03  Aligned_cols=74  Identities=19%  Similarity=0.168  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCChHHHHH--HHHHHhC----CCeEEEEEcCcchhhhhhccC------CCCceEEEEccCCCcCCCchhhh
Q 019935           82 SKLVLVAGGSGGVGQLV--VASLLSR----NIKSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l--~~~L~~~----g~~V~~~~R~~~~~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      .+||.|.|| |.+|..+  +..|+..    +.+++++++++++++......      .....++...     .+.+ +++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~-eaL   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLD-DVI   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHH-HHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChh-hcc
Confidence            358999996 8888653  3444432    469999999987765421100      0222332222     2455 678


Q ss_pred             cCCcEEEEcCCCC
Q 019935          150 EGVTHVICCTGTT  162 (333)
Q Consensus       150 ~~~d~vi~~a~~~  162 (333)
                      .++|+||+.++..
T Consensus        75 ~dad~Vv~~~~~g   87 (171)
T d1obba1          75 IDADFVINTAMVG   87 (171)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             cCCCeEeeecccc
Confidence            9999999998764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.70  E-value=0.094  Score=39.90  Aligned_cols=32  Identities=25%  Similarity=0.368  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLR  114 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R  114 (333)
                      |++|.|-| -|.||+.+++.|..++ .+|+.+.-
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            46899998 7999999999998875 67766643

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.33  E-value=0.044  Score=40.80  Aligned_cols=33  Identities=15%  Similarity=0.299  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLR  114 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R  114 (333)
                      ||+|.|.|+||.||....+.+.+.  .++|++++-
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            578999999999999999999886  478988764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.24  E-value=0.071  Score=42.60  Aligned_cols=36  Identities=19%  Similarity=0.258  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ...++|+|.|| |..|...+..|+++|++|+++.++.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            45689999995 9999999999999999999998765

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=92.98  E-value=0.12  Score=39.04  Aligned_cols=63  Identities=21%  Similarity=0.299  Sum_probs=40.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEE-EcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+|.|.| .|.+|+.+++.|.+. +.+++++ +|+++...       ..+  ....     .+.. ...+++|+|+.+..
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-------~~~--~~~~-----~~~~-~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-------KTP--VFDV-----ADVD-KHADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-------SSC--EEEG-----GGGG-GTTTTCSEEEECSC
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-------ccc--cccc-----hhhh-hhccccceEEEeCC
Confidence            4799999 699999999999876 6777664 45543221       111  1111     1233 34567999998875


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus        68 ~   68 (170)
T d1f06a1          68 S   68 (170)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.95  E-value=0.053  Score=45.20  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ..|+|+|.|| |..|...+..|+++|++|.++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3468999995 9999999999999999999998764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.84  E-value=0.016  Score=43.28  Aligned_cols=63  Identities=19%  Similarity=0.184  Sum_probs=38.5

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      |-+.| +|.+|+++++.|.+.++.+.+++|++++.+.+.+...        ...   .+.. ++.+.+|+||.+..
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~--------~~~---~~~~-~~~~~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG--------GKA---ATLE-KHPELNGVVFVIVP   64 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC--------CCC---CSSC-CCCC---CEEECSC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc--------ccc---cchh-hhhccCcEEEEecc
Confidence            34667 7999999999886655555789999999888765321        111   2233 44567899998863

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.84  E-value=0.09  Score=39.09  Aligned_cols=36  Identities=8%  Similarity=0.001  Sum_probs=29.6

Q ss_pred             CCeEEEE-cCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVA-GGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      ++.++|. .+.|+||..+++.|++.|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3456565 35699999999999999999999998753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.79  E-value=0.055  Score=40.24  Aligned_cols=33  Identities=18%  Similarity=0.290  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLR  114 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R  114 (333)
                      +|+|.|.|+||.||....+.+.+.  .++|++++-
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            479999999999999999999875  488988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.75  E-value=0.06  Score=40.97  Aligned_cols=34  Identities=21%  Similarity=0.234  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      +++|+|.|| |++|-.++..|.+.|++|.++.+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            468999995 9999999999999999887766544

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.06  E-value=0.061  Score=43.96  Aligned_cols=33  Identities=36%  Similarity=0.363  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|+|.|| |.-|...+..|+++|++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            46999996 9999999999999999999998754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.05  E-value=0.11  Score=36.65  Aligned_cols=35  Identities=23%  Similarity=0.239  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~  117 (333)
                      .++++|.|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            368999995 9999999987665   4889999998653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.063  Score=48.73  Aligned_cols=107  Identities=12%  Similarity=0.078  Sum_probs=61.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEEcCcchhhh-----------------------hhccCCCCceEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATT-----------------------LFGKQDEETLQVCKG  136 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-----------------------~~~~~~~~~~~~v~~  136 (333)
                      ...+|+|.|+ |++|.++++.|+..| .++++++.+.-....                       +.+.-+.-+++++..
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            3458999996 889999999999999 478888754311111                       111111223344444


Q ss_pred             cCCCc-CCCchhhhcCCcEEEEcCCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEecccccc
Q 019935          137 DTRNP-KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (333)
Q Consensus       137 D~~d~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~  207 (333)
                      +..+. +... ..+.+.|+||.+..                  |......+.+.|+..-..+|..++.+.+|
T Consensus       103 ~~~~~~~~~~-~~~~~~dvVv~~~~------------------~~~~~~~l~~~c~~~~ip~i~~~~~G~~G  155 (529)
T d1yova1         103 SPENLLDNDP-SFFCRFTVVVATQL------------------PESTSLRLADVLWNSQIPLLICRTYGLVG  155 (529)
T ss_dssp             CHHHHHHSCG-GGGGGCSEEEEESC------------------CHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred             CchhhhhhHH-HHhcCCCEEEECCC------------------CHHHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence            33221 1222 45678999997752                  22333445556644223677777777665

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.80  E-value=0.06  Score=44.36  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=30.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      +|+|.|| |-.|..++..|.+.|++|.++.|+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999996 89999999999999999999998764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.58  E-value=0.37  Score=36.53  Aligned_cols=75  Identities=11%  Similarity=-0.022  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCC---------------CCceEEEEccCCCcCCCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---------------EETLQVCKGDTRNPKDLD  145 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~---------------~~~~~~v~~D~~d~~~~~  145 (333)
                      ++.+||..|..-  |+ .+..|+++|++|++++.++...+.......               .....++.+|..+...  
T Consensus        20 ~~~rvLd~GCG~--G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~--   94 (201)
T d1pjza_          20 PGARVLVPLCGK--SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA--   94 (201)
T ss_dssp             TTCEEEETTTCC--SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred             CCCEEEEecCcC--CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc--
Confidence            456999999543  33 566888889999999999866544332211               2334666777644222  


Q ss_pred             hhhhcCCcEEEEcCCC
Q 019935          146 PAIFEGVTHVICCTGT  161 (333)
Q Consensus       146 ~~~~~~~d~vi~~a~~  161 (333)
                       ......|.|+.....
T Consensus        95 -~~~~~~D~i~~~~~l  109 (201)
T d1pjza_          95 -RDIGHCAAFYDRAAM  109 (201)
T ss_dssp             -HHHHSEEEEEEESCG
T ss_pred             -ccccceeEEEEEeee
Confidence             223456877775543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.52  E-value=0.083  Score=43.21  Aligned_cols=31  Identities=26%  Similarity=0.335  Sum_probs=28.5

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889995 9999999999999999999998854

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=91.27  E-value=0.21  Score=42.26  Aligned_cols=73  Identities=12%  Similarity=0.212  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-C-CeEEEEEcCcchhhhhhccCC-CCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+++.|+| +|..+..-++.+... + .+|++++|++++.+++.+... ..++.+..+|     +++ ++++++|+|+-
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~-----s~~-eav~~ADIi~t  199 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS-----SVA-EAVKGVDIITT  199 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS-----SHH-HHHTTCSEEEE
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC-----CHH-HHHhcCCceee
Confidence            446899999 689999888887663 5 689999999988776654332 3456665544     567 78899999998


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +.+
T Consensus       200 ~Ta  202 (340)
T d1x7da_         200 VTA  202 (340)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.12  Score=42.83  Aligned_cols=34  Identities=24%  Similarity=0.273  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      +..+|+|.|| |.-|-..+..|.++|++|.++-.+
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            3457999995 999999999999999999999654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.17  E-value=0.13  Score=36.28  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=27.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC---CCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSR---NIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~R~~  116 (333)
                      .++++|.|| |++|-.++..|.+.   |.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            368999996 99999999766654   56899998865

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.15  E-value=0.19  Score=37.95  Aligned_cols=74  Identities=24%  Similarity=0.321  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChHHHH-HHHHHHhC-----CCeEEEEEcCcchhhhhhccCC------CCceEEEEccCCCcCCCchhhh
Q 019935           82 SKLVLVAGGSGGVGQL-VVASLLSR-----NIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~-l~~~L~~~-----g~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      ..||.|.|| |.+|.. ++..|+..     +.++++++.++++++.......      .....+...     .+.+ +++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~-eal   75 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPE-EAF   75 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHH-HHH
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChh-hcc
Confidence            357999998 545554 44444432     2489999999887653211100      122222211     2345 678


Q ss_pred             cCCcEEEEcCCCC
Q 019935          150 EGVTHVICCTGTT  162 (333)
Q Consensus       150 ~~~d~vi~~a~~~  162 (333)
                      +++|+||..+|..
T Consensus        76 ~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 TDVDFVMAHIRVG   88 (167)
T ss_dssp             SSCSEEEECCCTT
T ss_pred             CCCCEEEECCCcC
Confidence            8999999999875

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.10  E-value=0.061  Score=41.12  Aligned_cols=32  Identities=22%  Similarity=0.208  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      ..+|+|.| +|++|-.++..|.+.|.+|.++.+
T Consensus         3 ~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            34699999 599999999999999987766554

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.01  E-value=0.099  Score=43.28  Aligned_cols=32  Identities=25%  Similarity=0.453  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~  116 (333)
                      .|+|.|| |-+|..++.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            5999995 9999999999999995 699998864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.88  E-value=0.11  Score=41.04  Aligned_cols=31  Identities=19%  Similarity=0.175  Sum_probs=28.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.| +|.-|...|..|+++|++|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            89999 59999999999999999999998865

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.70  E-value=0.1  Score=43.41  Aligned_cols=33  Identities=18%  Similarity=0.215  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ..|+|.|| |.-|..+|+.|++.|++|.++.++.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            46999995 9999999999999999999998764

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.56  E-value=0.14  Score=39.47  Aligned_cols=33  Identities=21%  Similarity=0.204  Sum_probs=27.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~  116 (333)
                      |||+|.|| |++|-.++..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            57999996 899999999998874  6788888754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.50  E-value=0.19  Score=40.50  Aligned_cols=35  Identities=23%  Similarity=0.203  Sum_probs=31.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      ++++++|+|-| -|.+|+++++.|.+.|++|+.++-
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            56789999998 799999999999999999988763

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.45  E-value=0.15  Score=42.90  Aligned_cols=36  Identities=19%  Similarity=0.337  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEEcCcc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE  117 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~  117 (333)
                      .+|+|+|.|| |.-|...+..|+++|  ++|+++-|+.+
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            3579999995 999999999999876  69999998753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.32  E-value=0.16  Score=36.81  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHh----CCCeEEEEEcCc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDP  116 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~R~~  116 (333)
                      .++++|.|| |++|-.++..|.+    .|.+|+++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            468999995 9999999998863    589999998855

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.26  E-value=0.69  Score=36.34  Aligned_cols=77  Identities=8%  Similarity=-0.055  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--------------------CCCceEEEEccCCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------------------DEETLQVCKGDTRN  140 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--------------------~~~~~~~v~~D~~d  140 (333)
                      .+.+||..|...  | ..+..|+++|++|++++-++...+......                    ...+++++.+|+.+
T Consensus        45 ~~~rvLd~GCG~--G-~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGK--A-VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTT--C-THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCC--c-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            456899998533  3 447777889999999999987654332111                    13467788888765


Q ss_pred             cCCCchhhhcCCcEEEEcCCCCC
Q 019935          141 PKDLDPAIFEGVTHVICCTGTTA  163 (333)
Q Consensus       141 ~~~~~~~~~~~~d~vi~~a~~~~  163 (333)
                      .....   ....|+|+......+
T Consensus       122 l~~~~---~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         122 LPRTN---IGKFDMIWDRGALVA  141 (229)
T ss_dssp             GGGSC---CCCEEEEEESSSTTT
T ss_pred             ccccc---cCceeEEEEEEEEEe
Confidence            43222   234688887776543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=90.25  E-value=0.53  Score=33.96  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=29.2

Q ss_pred             CCeEEEEcCC---ChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           82 SKLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        82 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      .|+|.|.|+|   +..|..+.+.|.+.|++++.+.-+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            4689999998   569999999999999999887543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.95  E-value=0.61  Score=36.54  Aligned_cols=77  Identities=14%  Similarity=0.170  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhh---hhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ++.+||..|+..+--++++..|.  |.+|+++.++++-.+.   ........++.++.+|..+..  .  .....|.||-
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~--~--~~~pfD~Iiv  151 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF--P--PKAPYDVIIV  151 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--G--GGCCEEEEEE
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC--c--ccCcceeEEe
Confidence            34578888866555556666665  5679999998654332   222223578999999985422  1  2356899998


Q ss_pred             cCCCCC
Q 019935          158 CTGTTA  163 (333)
Q Consensus       158 ~a~~~~  163 (333)
                      .++...
T Consensus       152 ~~a~~~  157 (215)
T d1jg1a_         152 TAGAPK  157 (215)
T ss_dssp             CSBBSS
T ss_pred             eccccc
Confidence            887643

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.47  E-value=0.035  Score=44.33  Aligned_cols=27  Identities=22%  Similarity=0.233  Sum_probs=23.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSR  110 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~  110 (333)
                      |+|+|.|| |-+|..+|.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            47999995 9999999999999998654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.25  E-value=0.24  Score=39.92  Aligned_cols=34  Identities=32%  Similarity=0.324  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE  117 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~  117 (333)
                      .+|+|.|| |..|..++..|.+.|. +|.++-|++.
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            47999995 9999999999999994 8999988654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.04  E-value=0.78  Score=34.37  Aligned_cols=31  Identities=29%  Similarity=0.367  Sum_probs=26.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      ++|.|-| -|.||+.+.+.|..++.+|+++.-
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence            3688888 699999999999999999888764

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.03  E-value=0.18  Score=37.46  Aligned_cols=31  Identities=19%  Similarity=0.374  Sum_probs=26.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      ||+|.|| |++|-.++..|. ++.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999995 999999999985 478999998753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.02  E-value=0.18  Score=39.95  Aligned_cols=32  Identities=25%  Similarity=0.249  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~  116 (333)
                      +|+|.|| |..|...+..|.++|+ +|+++-+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999995 9999999999999995 799998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=88.99  E-value=0.071  Score=40.02  Aligned_cols=71  Identities=15%  Similarity=0.142  Sum_probs=38.1

Q ss_pred             CeEEEEcCCChHHHHHH-HHHHhC-CCeEEEE-EcCcchh-hhhhccCCCCceEEEEccCCCcCCCch-hhhcCCcEEEE
Q 019935           83 KLVLVAGGSGGVGQLVV-ASLLSR-NIKSRLL-LRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDP-AIFEGVTHVIC  157 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~-~~L~~~-g~~V~~~-~R~~~~~-~~~~~~~~~~~~~~v~~D~~d~~~~~~-~~~~~~d~vi~  157 (333)
                      .+|.|.| +|++|+.+. +.|... ..+++++ +|+.+.. ..+.+   ..++.+....+   +.+.+ ..+.++|+||.
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~---~~~i~~~~~~~---d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ---RMGVTTTYAGV---EGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH---HTTCCEESSHH---HHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh---hcCCcccccce---eeeeecccccccCEEEE
Confidence            5899999 899999754 555444 4577776 5665422 22221   11232222111   22220 12457999998


Q ss_pred             cCC
Q 019935          158 CTG  160 (333)
Q Consensus       158 ~a~  160 (333)
                      +..
T Consensus        78 ATp   80 (157)
T d1nvmb1          78 ATS   80 (157)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            763

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.94  E-value=0.21  Score=40.51  Aligned_cols=35  Identities=26%  Similarity=0.154  Sum_probs=31.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      ++++++|+|-| .|.+|+++++.|.+.|++|++++-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            56788999999 699999999999999999988753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.82  E-value=0.24  Score=35.35  Aligned_cols=75  Identities=15%  Similarity=0.090  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCC----------ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-
Q 019935           81 SSKLVLVAGGS----------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-  149 (333)
Q Consensus        81 ~~~~vlVtGat----------G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-  149 (333)
                      ..++|||.|+.          -+.+.+.+++|.+.|+++++++-+++....-...  ..+   +...=-..+.+. +.+ 
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~---lYfePlt~e~v~-~Ii~   79 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADA---TYIEPIHWEVVR-KIIE   79 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSE---EECSCCCHHHHH-HHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cce---eeeecCCHHHHH-HHHH
Confidence            44799999984          3689999999999999999999988765432210  111   111211223333 333 


Q ss_pred             -cCCcEEEEcCCC
Q 019935          150 -EGVTHVICCTGT  161 (333)
Q Consensus       150 -~~~d~vi~~a~~  161 (333)
                       ++.|.|+-..|.
T Consensus        80 ~E~pd~il~~~GG   92 (127)
T d1a9xa3          80 KERPDAVLPTMGG   92 (127)
T ss_dssp             HHCCSEEECSSSH
T ss_pred             HhCcCCeEEEeee
Confidence             378998876654

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.73  E-value=0.93  Score=33.95  Aligned_cols=30  Identities=20%  Similarity=0.295  Sum_probs=26.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      +|.|-| -|.||+.+.+.+++.+.+|+.+.-
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence            578888 799999999999999988887764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.56  E-value=0.45  Score=35.13  Aligned_cols=35  Identities=23%  Similarity=0.236  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEEcCc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP  116 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~  116 (333)
                      -+++|+|.|| |..|...+..|++.|++ |+++.|..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3567999985 99999999999999965 77887754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.83  E-value=0.43  Score=37.25  Aligned_cols=76  Identities=13%  Similarity=0.082  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGat-G~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ++.+||=.|++ |+.-.++++. ...| +|++++-++...+.+.... ...++.++.+|..++.... ..+..+|+|+|.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~-v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-~~~~~vd~v~~~  132 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADI-VDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-GIVEKVDLIYQD  132 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHH-TTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-TTCCCEEEEEEC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHh-ccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-cccceEEEEEec
Confidence            45688888754 4454555544 3445 8999999987665443211 1468899999999988777 667788998886


Q ss_pred             C
Q 019935          159 T  159 (333)
Q Consensus       159 a  159 (333)
                      .
T Consensus       133 ~  133 (209)
T d1nt2a_         133 I  133 (209)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.68  E-value=0.55  Score=33.01  Aligned_cols=39  Identities=15%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             CCeEEEEcCCC----------hHHHHHHHHHHhCCCeEEEEEcCcchhh
Q 019935           82 SKLVLVAGGSG----------GVGQLVVASLLSRNIKSRLLLRDPEKAT  120 (333)
Q Consensus        82 ~~~vlVtGatG----------~iG~~l~~~L~~~g~~V~~~~R~~~~~~  120 (333)
                      .++|||.|+..          +.+.+.+++|.+.|++++++.-+++...
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs   52 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS   52 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh
Confidence            46899999743          7899999999999999999999886654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.64  E-value=0.25  Score=41.01  Aligned_cols=33  Identities=21%  Similarity=0.192  Sum_probs=29.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      .|+|+|| |..|...+.+|.++|.+|+++.+.++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            5999996 99999999999999999999988653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.38  E-value=0.99  Score=35.12  Aligned_cols=78  Identities=14%  Similarity=0.108  Sum_probs=47.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhh---ccCCCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF---GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      .+.+||-.|+..+--+.+...+...+..|++++.+++..+...   ......++.++.+|..+.  +.  .....|.|+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~--~~--~~~~fD~I~~  150 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG--VP--EFSPYDVIFV  150 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--CG--GGCCEEEEEE
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc--cc--cccchhhhhh
Confidence            4568887775544444444444555568999999876544322   222245677778875432  11  2245899998


Q ss_pred             cCCCC
Q 019935          158 CTGTT  162 (333)
Q Consensus       158 ~a~~~  162 (333)
                      +++..
T Consensus       151 ~~~~~  155 (213)
T d1dl5a1         151 TVGVD  155 (213)
T ss_dssp             CSBBS
T ss_pred             hccHH
Confidence            88653

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.07  E-value=0.071  Score=40.23  Aligned_cols=73  Identities=16%  Similarity=0.094  Sum_probs=44.1

Q ss_pred             CeEEEEcCCChHHHHHHHH-HHhC-----CCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhcCCc
Q 019935           83 KLVLVAGGSGGVGQLVVAS-LLSR-----NIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVT  153 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~-L~~~-----g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~~~d  153 (333)
                      +||.|.|| |.+|..++-. |+..     +.++++++.++++........   ......+...     .+.. +.++++|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t-----~~~~-~~l~~aD   73 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS-----DTFE-GAVVDAK   73 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC-----SSHH-HHHTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe-----cCcc-cccCCCC
Confidence            47999997 5567666533 3321     368999999988765432110   0122222211     1234 6788999


Q ss_pred             EEEEcCCCC
Q 019935          154 HVICCTGTT  162 (333)
Q Consensus       154 ~vi~~a~~~  162 (333)
                      +||..|+..
T Consensus        74 vVVita~~~   82 (162)
T d1up7a1          74 YVIFQFRPG   82 (162)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEecccC
Confidence            999999864

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.76  E-value=0.31  Score=38.71  Aligned_cols=32  Identities=25%  Similarity=0.377  Sum_probs=29.2

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~  117 (333)
                      |+|.|| |-.|...+..|+++|++|.++.+++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            889995 99999999999999999999998753

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.65  E-value=0.25  Score=35.32  Aligned_cols=93  Identities=15%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHh-CCCeEEEEEc-CcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-cCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~R-~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-~~~d~vi~~a  159 (333)
                      .+|+|.|| |.+|+++++.+.. .|++++++.- ++++....     -.++.+...     +.++ +.. ..+++++.+.
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-----I~Gi~V~~~-----~~l~-~~~~~~i~iai~~i   71 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP-----VRGGVIEHV-----DLLP-QRVPGRIEIALLTV   71 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-----ETTEEEEEG-----GGHH-HHSTTTCCEEEECS
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-----ECCEEEecH-----HHHH-HHHhhcccEEEEeC
Confidence            47999995 9999999998754 4789888655 44333221     234555433     2344 332 3456665554


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhc-CCCCCeEEEEeccccc
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT  206 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~-~~~~~~~v~~SS~~~~  206 (333)
                      ..                   .....+++.+ +.|++.|..++.....
T Consensus        72 ~~-------------------~~~~~I~d~l~~~gIk~I~~f~~~~l~  100 (126)
T d2dt5a2          72 PR-------------------EAAQKAADLLVAAGIKGILNFAPVVLE  100 (126)
T ss_dssp             CH-------------------HHHHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred             CH-------------------HHHHHHHHHHHHcCCCEEeecCceeec
Confidence            21                   2334566544 3488888877655543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.62  E-value=1.5  Score=36.15  Aligned_cols=72  Identities=18%  Similarity=0.086  Sum_probs=46.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEEcCcchhhh---hhccCCCCceEEEEccCCCcCCCchhhhcCCcEE
Q 019935           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (333)
Q Consensus        80 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~v  155 (333)
                      .++++||-.|+..++   ++..+++.|+ +|++++.++.....   ........++.++.+|+.+...-.    +.+|+|
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~~----~~~D~I  106 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV----EKVDVI  106 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC----SCEEEE
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCcc----ccceEE
Confidence            457899999865433   4555667785 79999987643221   112222567899999987754332    468999


Q ss_pred             EEc
Q 019935          156 ICC  158 (333)
Q Consensus       156 i~~  158 (333)
                      +..
T Consensus       107 vse  109 (311)
T d2fyta1         107 ISE  109 (311)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.48  E-value=0.97  Score=35.53  Aligned_cols=78  Identities=14%  Similarity=0.038  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--------CCCceEEEEccCCCcCCCchhhhcCC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------DEETLQVCKGDTRNPKDLDPAIFEGV  152 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--------~~~~~~~v~~D~~d~~~~~~~~~~~~  152 (333)
                      ++.+||-.|...+--.++..++.....+|+.++++++-.+...+..        ...++.++.+|..+..    ......
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----~~~~~f  151 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----AEEAPY  151 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----GGGCCE
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----chhhhh
Confidence            4568999998877777777778877789999999875543321110        1356778888865321    112468


Q ss_pred             cEEEEcCCCC
Q 019935          153 THVICCTGTT  162 (333)
Q Consensus       153 d~vi~~a~~~  162 (333)
                      |.|+.+++..
T Consensus       152 D~I~~~~~~~  161 (224)
T d1i1na_         152 DAIHVGAAAP  161 (224)
T ss_dssp             EEEEECSBBS
T ss_pred             hhhhhhcchh
Confidence            9999988764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.35  E-value=0.34  Score=40.22  Aligned_cols=31  Identities=26%  Similarity=0.323  Sum_probs=28.2

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.|| |..|...+..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789995 9999999999999999999998754

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.64  E-value=0.73  Score=35.94  Aligned_cols=142  Identities=10%  Similarity=-0.016  Sum_probs=73.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC---CCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ...+||=.|+  +.|..+...|.+.+.+|++++-++.-.+...+..   ...+++++.+|+.+...-.    +..|+|+.
T Consensus        60 ~~~~vLDiGc--G~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~----~~fD~I~~  133 (222)
T d2ex4a1          60 GTSCALDCGA--GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP----DSYDVIWI  133 (222)
T ss_dssp             CCSEEEEETC--TTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS----SCEEEEEE
T ss_pred             CCCEEEEecc--CCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccccccc----cccccccc
Confidence            3467888884  3444333334444678999998876544332211   1345788999987643222    45799888


Q ss_pred             cCCCCCCCCCCCCCCCCCcchhH-HHHHHHHHhcCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcC
Q 019935          158 CTGTTAFPSRRWDGDNTPEKVDW-EGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (333)
Q Consensus       158 ~a~~~~~~~~~~~~~~~~~~~n~-~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~g  236 (333)
                      .....+.           .+.+. .....+.+.++.+ +.|++.......+    .......+.+........+.+.+.|
T Consensus       134 ~~~l~h~-----------~~~~~~~~l~~i~~~Lk~~-G~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~aG  197 (222)
T d2ex4a1         134 QWVIGHL-----------TDQHLAEFLRRCKGSLRPN-GIIVIKDNMAQEG----VILDDVDSSVCRDLDVVRRIICSAG  197 (222)
T ss_dssp             ESCGGGS-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEEEBSSS----EEEETTTTEEEEBHHHHHHHHHHTT
T ss_pred             ccccccc-----------hhhhhhhHHHHHHHhcCCc-ceEEEEEcccccc----cccccCCceeeCCHHHHHHHHHHcC
Confidence            7654331           11222 2334444455543 3555543222211    0000111111122345667788889


Q ss_pred             CCEEEEEc
Q 019935          237 LPFTIIRA  244 (333)
Q Consensus       237 i~~~~vrp  244 (333)
                      +.++-.+.
T Consensus       198 f~ii~~~~  205 (222)
T d2ex4a1         198 LSLLAEER  205 (222)
T ss_dssp             CCEEEEEE
T ss_pred             CEEEEEEE
Confidence            98765553

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.53  E-value=0.39  Score=40.66  Aligned_cols=29  Identities=17%  Similarity=0.203  Sum_probs=27.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      |+|.| +|+-|..+|.+|+++|++|.++-+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            78999 699999999999999999999987

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.39  E-value=0.82  Score=34.22  Aligned_cols=74  Identities=14%  Similarity=0.021  Sum_probs=41.9

Q ss_pred             CeEEEEcC-CChHHHHHHHHHHhCC----CeEEEEEcCcch--hhhhhccC------CCCceEEEEccCCCcCCCchhhh
Q 019935           83 KLVLVAGG-SGGVGQLVVASLLSRN----IKSRLLLRDPEK--ATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIF  149 (333)
Q Consensus        83 ~~vlVtGa-tG~iG~~l~~~L~~~g----~~V~~~~R~~~~--~~~~~~~~------~~~~~~~v~~D~~d~~~~~~~~~  149 (333)
                      +||.|.|| +.+.+..++..++...    -++++++.++++  .+.+....      ......+.  .   -.+.. +.+
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~---~td~~-~al   75 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--L---TLDRR-RAL   75 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--E---ESCHH-HHH
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--e---cCCch-hhc
Confidence            57999997 3345555555555432    488999987754  22221000      01112211  1   12334 667


Q ss_pred             cCCcEEEEcCCCC
Q 019935          150 EGVTHVICCTGTT  162 (333)
Q Consensus       150 ~~~d~vi~~a~~~  162 (333)
                      +++|+||+.|+..
T Consensus        76 ~gaDvVv~ta~~~   88 (169)
T d1s6ya1          76 DGADFVTTQFRVG   88 (169)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             CCCCEEEEccccC
Confidence            8999999999875

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.99  E-value=0.66  Score=38.77  Aligned_cols=71  Identities=8%  Similarity=0.040  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-C-CeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      ..+++.|.| +|..++..++.|... . .+|++++|++++.+.+........+...       .+.. +...++|+|+.+
T Consensus       124 ~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~-------~~~~-~a~~~aDiV~ta  194 (320)
T d1omoa_         124 NSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-------VQPA-EEASRCDVLVTT  194 (320)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-------ECCH-HHHTSSSEEEEC
T ss_pred             CccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccc-------cchh-hhhccccEEEEe
Confidence            446889998 799999999998864 4 5899999999887776543322222221       1233 556789999877


Q ss_pred             CC
Q 019935          159 TG  160 (333)
Q Consensus       159 a~  160 (333)
                      ..
T Consensus       195 T~  196 (320)
T d1omoa_         195 TP  196 (320)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=84.76  E-value=0.94  Score=35.46  Aligned_cols=74  Identities=14%  Similarity=0.151  Sum_probs=44.4

Q ss_pred             CCCeEEEEcCCChHHH-HHHHHHHhC-CCeEE-EEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEE
Q 019935           81 SSKLVLVAGGSGGVGQ-LVVASLLSR-NIKSR-LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~-~l~~~L~~~-g~~V~-~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~v  155 (333)
                      +.-+|.|.| .|.+|+ +++..|... +.+|+ +++|++++.+.+.+...-....+.  .   ..+++ ++++  ++|+|
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~--~---~~d~~-ell~~~~iD~V  104 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIY--D---YSNFD-KIAKDPKIDAV  104 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEE--C---SSSGG-GGGGCTTCCEE
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccccc--c---cCchh-hhcccccceee
Confidence            444899999 599996 566666654 67777 467888887766543211111111  1   12344 4443  68999


Q ss_pred             EEcCCC
Q 019935          156 ICCTGT  161 (333)
Q Consensus       156 i~~a~~  161 (333)
                      +-+...
T Consensus       105 ~I~tp~  110 (221)
T d1h6da1         105 YIILPN  110 (221)
T ss_dssp             EECSCG
T ss_pred             eeccch
Confidence            877643

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=84.55  E-value=0.51  Score=40.47  Aligned_cols=32  Identities=22%  Similarity=0.241  Sum_probs=24.4

Q ss_pred             CeEEEEcC------CChHH---HHHHHHHHhCCCeEEEEEc
Q 019935           83 KLVLVAGG------SGGVG---QLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        83 ~~vlVtGa------tG~iG---~~l~~~L~~~g~~V~~~~R  114 (333)
                      ||||+++.      +||+|   .+|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            46777664      47777   5568899999999999874

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=84.41  E-value=1.2  Score=32.99  Aligned_cols=67  Identities=21%  Similarity=0.254  Sum_probs=42.0

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHhC-CCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhh-cCCcEEEEcC
Q 019935           83 KLVLVAGGSGGVGQL-VVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCT  159 (333)
Q Consensus        83 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~-~~~d~vi~~a  159 (333)
                      .+|.|.| .|.+|+. ....|.+. +.+++++++++++.+.+.+.....   .+.      .+++ +++ .++|+|+-+.
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~~------~~~~-~ll~~~iD~V~I~t   70 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVS---ATC------TDYR-DVLQYGVDAVMIHA   70 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCC---CCC------SSTT-GGGGGCCSEEEECS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccc---ccc------ccHH-Hhcccccceecccc
Confidence            4799999 5888865 56666665 568888888887777665432111   111      2233 333 3789998776


Q ss_pred             C
Q 019935          160 G  160 (333)
Q Consensus       160 ~  160 (333)
                      .
T Consensus        71 p   71 (167)
T d1xeaa1          71 A   71 (167)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.26  E-value=0.55  Score=36.42  Aligned_cols=77  Identities=12%  Similarity=0.107  Sum_probs=43.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh-hhh-----hccCCCCceEEEE-ccCCCcCCCchhhh-cCCcE
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTL-----FGKQDEETLQVCK-GDTRNPKDLDPAIF-EGVTH  154 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~-----~~~~~~~~~~~v~-~D~~d~~~~~~~~~-~~~d~  154 (333)
                      |+|+|.| ++..|..+.+.|.+.|++|.++.-.+++. ...     .......++.+.. .|+.+++.++ ... ..+|.
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~-~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVE-RIAQLSPDV   78 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHH-HHHHTCCSE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhh-hhhhhcccc
Confidence            4788886 57789999999999999997765322221 110     0000022344433 3454444333 222 27898


Q ss_pred             EEEcCCC
Q 019935          155 VICCTGT  161 (333)
Q Consensus       155 vi~~a~~  161 (333)
                      +|...+.
T Consensus        79 ii~~g~~   85 (203)
T d2blna2          79 IFSFYYR   85 (203)
T ss_dssp             EEEESCC
T ss_pred             eeeeecc
Confidence            8887643

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=83.95  E-value=1.8  Score=30.12  Aligned_cols=88  Identities=16%  Similarity=0.175  Sum_probs=56.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      ..+|+|-|-||..|+.-++...+.|.+|++-+......+...      ++-+       .++++ ++.+  ++|+=+-..
T Consensus         6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~------giPV-------f~sV~-eAv~~~~~~~SvIfV   71 (119)
T d2nu7a1           6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHL------GLPV-------FNTVR-EAVAATGATASVIYV   71 (119)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEET------TEEE-------ESSHH-HHHHHHCCCEEEECC
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccC------CCch-------hhHHH-HHHHHhCCCeEEEec
Confidence            358999999999999999999999999988776543332211      1111       23444 3333  556544433


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      .+.                  .....+++|+.++++.+|.++
T Consensus        72 Pp~------------------~a~dA~~EAi~agI~~iV~IT   95 (119)
T d2nu7a1          72 PAP------------------FCKDSILEAIDAGIKLIITIT   95 (119)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCSEEEECC
T ss_pred             cHH------------------HHHHHHHHHHHCCCCEEEEec
Confidence            221                  134566778777898888655

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.71  E-value=0.99  Score=35.89  Aligned_cols=35  Identities=14%  Similarity=0.230  Sum_probs=29.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEEc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLR  114 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R  114 (333)
                      ++++++|+|-| -|.+|+++++.|.+. |.+|+.++-
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence            46889999999 599999999999864 899888754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.46  E-value=2.5  Score=32.25  Aligned_cols=72  Identities=15%  Similarity=-0.008  Sum_probs=47.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC--CCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+||=.|++.+.   ++..|++.|++|++++.+++..+......  ....+..+.+|..+...-.    ...|+|+.+..
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~----~~fD~I~~~~~  111 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED----KTFDYVIFIDS  111 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT----TCEEEEEEESC
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccccC----cCceEEEEecc
Confidence            478989865543   55677788999999999876554332111  1456778888877643222    45799888765


Q ss_pred             C
Q 019935          161 T  161 (333)
Q Consensus       161 ~  161 (333)
                      .
T Consensus       112 l  112 (226)
T d1ve3a1         112 I  112 (226)
T ss_dssp             G
T ss_pred             h
Confidence            4

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.23  E-value=0.54  Score=38.62  Aligned_cols=31  Identities=32%  Similarity=0.503  Sum_probs=28.6

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.|| |..|...+..|+++|.+|.++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899995 9999999999999999999998764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.46  E-value=0.55  Score=36.74  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=29.3

Q ss_pred             CCCeEEEEcCCChHHHH-----HHHHHHhCCCeEEEEEcCc
Q 019935           81 SSKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~-----l~~~L~~~g~~V~~~~R~~  116 (333)
                      |+|.|.|+|+-|++|+.     |+..|++.|.+|.+++-+.
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            46789999999999975     5566677899999998653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.41  E-value=0.7  Score=35.67  Aligned_cols=30  Identities=20%  Similarity=0.252  Sum_probs=27.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEcC
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~  115 (333)
                      |+|.|| |..|...+..+++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789996 999999999999999999999875

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.40  E-value=9.2  Score=29.63  Aligned_cols=77  Identities=17%  Similarity=0.184  Sum_probs=52.7

Q ss_pred             CCCCeEEEEcC-CChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEEE
Q 019935           80 SSSKLVLVAGG-SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (333)
Q Consensus        80 ~~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~  157 (333)
                      ..+.+||=.|+ +|+.-+++++. .. +..|++++.++...+.+.... ...++..+.+|..++.... .....+|++++
T Consensus        73 kpG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-~~~~~v~~i~~  149 (230)
T d1g8sa_          73 KRDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYA-NIVEKVDVIYE  149 (230)
T ss_dssp             CTTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGT-TTCCCEEEEEE
T ss_pred             CCCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccc-cccceeEEeec
Confidence            45678998885 56666777764 33 348999999987665543322 2567888999998887776 44556677766


Q ss_pred             cC
Q 019935          158 CT  159 (333)
Q Consensus       158 ~a  159 (333)
                      ..
T Consensus       150 ~~  151 (230)
T d1g8sa_         150 DV  151 (230)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.35  E-value=0.64  Score=37.05  Aligned_cols=35  Identities=14%  Similarity=0.204  Sum_probs=30.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchh
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~  119 (333)
                      -|+|.|| |-.|...+..|+++|++|.++.+++...
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            3899995 9999999999999999999999876443

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=82.29  E-value=0.54  Score=39.14  Aligned_cols=32  Identities=25%  Similarity=0.485  Sum_probs=28.1

Q ss_pred             EEEEcCCChHHHHHHHHHH-----hCCCeEEEEEcCcc
Q 019935           85 VLVAGGSGGVGQLVVASLL-----SRNIKSRLLLRDPE  117 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~R~~~  117 (333)
                      |+|.|| |-.|..++..|+     ++|++|+++.|.+.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899996 999999999997     46999999998654

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.97  E-value=1.8  Score=30.53  Aligned_cols=89  Identities=15%  Similarity=0.093  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEc
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~  158 (333)
                      +..+|+|-|-||..|+.-+++.++.|-+|++-+.....-+...      ++-+       .+.++ ++.+  ++|+=+-.
T Consensus        14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~------giPV-------f~tV~-eA~~~~~~daSvIf   79 (130)
T d1euca1          14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHL------GLPV-------FNTVK-EAKEQTGATASVIY   79 (130)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET------TEEE-------ESSHH-HHHHHHCCCEEEEC
T ss_pred             CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcccc------Cccc-------hhhHH-HHHHhcCCcEEEEe
Confidence            3458999999999999999999999999998776543332211      1111       23444 4433  56655444


Q ss_pred             CCCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       159 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      ..+                  ......+++|+.+|++-+|.++
T Consensus        80 VPp------------------~~a~dAi~EAi~agI~liV~IT  104 (130)
T d1euca1          80 VPP------------------PFAAAAINEAIDAEVPLVVCIT  104 (130)
T ss_dssp             CCH------------------HHHHHHHHHHHHTTCSEEEECC
T ss_pred             cCH------------------HHHHHHHHHHHhCCCCEEEEec
Confidence            422                  1345667778888898877654

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=81.89  E-value=1.4  Score=37.06  Aligned_cols=124  Identities=11%  Similarity=0.074  Sum_probs=75.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhc---cCCCCceEEEEccCCCcCCCchhhhcCCcEEEEcCC
Q 019935           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a~  160 (333)
                      .+=+.+|+|.+|..|+    +.+.+|+++.-+++..+....   ...-.+++++.+|+.+.-..........|+||-.-.
T Consensus       216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDPP  291 (358)
T d1uwva2         216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPA  291 (358)
T ss_dssp             EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCC
T ss_pred             EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeCCC
Confidence            3456789999998764    567899999988766544321   112457889999987643322123346798887643


Q ss_pred             CCCCCCCCCCCCCCCcchhHHHHHHHHHh-cCCCCCeEEEEeccccccCCCCCccchhhhHHHHHHHHHHHHHHhcCCCE
Q 019935          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF  239 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a-~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~k~k~~~e~~l~~~gi~~  239 (333)
                      ..+            .       ..+++. ++.+.++|||+|---.                 ...+.+.. |.+.|.+.
T Consensus       292 R~G------------~-------~~~~~~l~~~~~~~ivYVSCnp~-----------------TlaRDl~~-l~~~gy~l  334 (358)
T d1uwva2         292 RAG------------A-------AGVMQQIIKLEPIRIVYVSCNPA-----------------TLARDSEA-LLKAGYTI  334 (358)
T ss_dssp             TTC------------C-------HHHHHHHHHHCCSEEEEEESCHH-----------------HHHHHHHH-HHHTTCEE
T ss_pred             Ccc------------H-------HHHHHHHHHcCCCEEEEEeCCHH-----------------HHHHHHHH-HHHCCCeE
Confidence            221            1       122332 2336789999984322                 23444443 34567888


Q ss_pred             EEEEccccc
Q 019935          240 TIIRAGRLT  248 (333)
Q Consensus       240 ~~vrpg~~~  248 (333)
                      .-++|-.++
T Consensus       335 ~~i~~~D~F  343 (358)
T d1uwva2         335 ARLAMLDMF  343 (358)
T ss_dssp             EEEEEECCS
T ss_pred             eEEEEEecC
Confidence            888877653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.88  E-value=0.95  Score=35.89  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=29.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEE
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLL  113 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~  113 (333)
                      ++++++|.|-| .|.+|+++++.|.+ .|.+|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            46788999998 79999999999975 599998876

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.83  E-value=0.7  Score=36.12  Aligned_cols=33  Identities=18%  Similarity=0.279  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~  116 (333)
                      .+|.|.|| |-.|...|..|+++  |++|+++.+.+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            38999995 99999999999875  78999998865

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.82  E-value=0.71  Score=37.37  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=29.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEEcCcc
Q 019935           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE  117 (333)
Q Consensus        84 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~  117 (333)
                      -|+|.|| |.-|...+..|+++ |++|.++.+.+.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            3999996 99999999999875 999999998753

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.60  E-value=0.83  Score=35.49  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=33.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        79 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      +..+|+|+|.| +|.-|..++..|++.+.+++.+.|..
T Consensus        29 ~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence            56789999999 58999999999999999999998875

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=81.59  E-value=2.7  Score=32.35  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhh---hccCCCCceEEEEccCCCcCCCchhhhcCCcEEEEc
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~  158 (333)
                      +++||=.|+..+.  . +..|++.|.+|++++-+++..+..   .......+++++.+|..+.. +.   -+..|+|+.+
T Consensus        16 ~~rVLDiGcG~G~--~-~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~---~~~fD~v~~~   88 (231)
T d1vl5a_          16 NEEVLDVATGGGH--V-ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FT---DERFHIVTCR   88 (231)
T ss_dssp             CCEEEEETCTTCH--H-HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SC---TTCEEEEEEE
T ss_pred             cCEEEEecccCcH--H-HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-cc---cccccccccc
Confidence            4689989865442  2 356778899999999987654322   22222567899999987643 22   1458999888


Q ss_pred             CCCC
Q 019935          159 TGTT  162 (333)
Q Consensus       159 a~~~  162 (333)
                      ....
T Consensus        89 ~~l~   92 (231)
T d1vl5a_          89 IAAH   92 (231)
T ss_dssp             SCGG
T ss_pred             cccc
Confidence            7654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=81.03  E-value=1.6  Score=35.80  Aligned_cols=32  Identities=28%  Similarity=0.439  Sum_probs=22.7

Q ss_pred             CeEEEEcCCChHHH-----HHHHHHHhCCCeEEEEEcC
Q 019935           83 KLVLVAGGSGGVGQ-----LVVASLLSRNIKSRLLLRD  115 (333)
Q Consensus        83 ~~vlVtGatG~iG~-----~l~~~L~~~g~~V~~~~R~  115 (333)
                      |+|+|++|+-+ |.     +|+++|.++||+|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764212 44     4889998999999887654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=80.96  E-value=1.9  Score=33.81  Aligned_cols=75  Identities=11%  Similarity=-0.057  Sum_probs=46.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccC-CCCceEEEEccCCCcCCCchhhhcCCcEEEEcC
Q 019935           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (333)
Q Consensus        81 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~D~~d~~~~~~~~~~~~d~vi~~a  159 (333)
                      .+.+||-.|...+--++   .|++.+.+|+.+.++++..+...+.. ...++.++.+|..+.  +.  .....|.||.++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g--~~--~~~pfD~Iiv~~  142 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLG--YE--EEKPYDRVVVWA  142 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGC--CG--GGCCEEEEEESS
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhc--ch--hhhhHHHHHhhc
Confidence            45689988865443333   34445678999999876544322111 156788999987542  22  124579999888


Q ss_pred             CCC
Q 019935          160 GTT  162 (333)
Q Consensus       160 ~~~  162 (333)
                      +..
T Consensus       143 a~~  145 (224)
T d1vbfa_         143 TAP  145 (224)
T ss_dssp             BBS
T ss_pred             chh
Confidence            753

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.89  E-value=1.3  Score=29.36  Aligned_cols=33  Identities=15%  Similarity=0.205  Sum_probs=27.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCc
Q 019935           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (333)
Q Consensus        83 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~  116 (333)
                      |||||.| +|+=-.+|+..|.+...+|+++--++
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~   33 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNA   33 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCc
Confidence            5899999 68888999999999899999875443

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.84  E-value=0.52  Score=38.01  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=28.7

Q ss_pred             CCeEEEEcCCChHHHHH-----HHHHHhCCCeEEEEEcCcc
Q 019935           82 SKLVLVAGGSGGVGQLV-----VASLLSRNIKSRLLLRDPE  117 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l-----~~~L~~~g~~V~~~~R~~~  117 (333)
                      ||+|.|+| =|++|+..     +..|++.|++|.+++.++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 89999754     4577888999999999863

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=80.76  E-value=0.72  Score=38.93  Aligned_cols=29  Identities=28%  Similarity=0.358  Sum_probs=27.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEEc
Q 019935           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (333)
Q Consensus        85 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R  114 (333)
                      |+|.| +|+-|..+|.+|+++|++|.++-+
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence            88999 599999999999999999999986

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=80.57  E-value=2.2  Score=29.65  Aligned_cols=88  Identities=18%  Similarity=0.178  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEEcCcchhhhhhccCCCCceEEEEccCCCcCCCchhhhc--CCcEEEEcC
Q 019935           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (333)
Q Consensus        82 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D~~d~~~~~~~~~~--~~d~vi~~a  159 (333)
                      ..+|+|-|-||..|+.-+++.++.|.+|++-+.....-+...      ++-+       .++++ ++.+  ++|+=+-..
T Consensus         7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~------giPV-------f~tV~-eAv~~~~~d~SvIfV   72 (121)
T d1oi7a1           7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL------GVPV-------YDTVK-EAVAHHEVDASIIFV   72 (121)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET------TEEE-------ESSHH-HHHHHSCCSEEEECC
T ss_pred             CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE------CCch-------HhhHH-HHHHhcCCeEEEEee
Confidence            348999999999999999999999999998776543332221      1111       23444 3333  566554444


Q ss_pred             CCCCCCCCCCCCCCCCcchhHHHHHHHHHhcCCCCCeEEEEe
Q 019935          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS  201 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  201 (333)
                      .+                  ......+++|+.++++.+|.++
T Consensus        73 Pp------------------~~a~dAi~EAi~agI~liv~IT   96 (121)
T d1oi7a1          73 PA------------------PAAADAALEAAHAGIPLIVLIT   96 (121)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCSEEEECC
T ss_pred             CH------------------HHHHHHHHHHHhCCCcEEEEec
Confidence            22                  1234566778778998887655