BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019936
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLR 321
+Y +++++ +DL TIQ+++ + YS + F D+LL+FNN Y P + QL
Sbjct: 292 DYFDVIKEPMDLSTIQSKLNKNEYST-LEEFESDILLMFNNCFTYNPPGTPVHVMGRQLE 350
Query: 322 NL 323
N+
Sbjct: 351 NV 352
>sp|Q338B9|GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica
GN=GCN5 PE=2 SV=1
Length = 511
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L++ N H P + + ++ +Y ++++ +DL+T+ RVE Y + F D+
Sbjct: 410 LLKNMNEH-PDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADM 468
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
+F+NA Y ++ + A +L + SN++
Sbjct: 469 KRMFSNAKTYNSPDTIYYKCASRLESFFSNKV 500
>sp|Q8R3B7|BRD8_MOUSE Bromodomain-containing protein 8 OS=Mus musculus GN=Brd8 PE=1 SV=2
Length = 951
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 242 NHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFN 301
NH ++F + + + Y +V++ +DL TI+ +E G + F RD++L+F
Sbjct: 798 NHRYANVFLQPVTDDIAPG--YHSIVQRPMDLSTIKKNIENGLIRSTA-EFQRDIMLMFQ 854
Query: 302 NAIVY 306
NA++Y
Sbjct: 855 NAVMY 859
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L R LP F + + Q+ +Y ++V+ +DL TI+ +++ G Y + D+
Sbjct: 1064 LYRQDPESLP--FRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQE-PWQYIDDI 1120
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
L+FNNA +Y K S + +L + EI
Sbjct: 1121 WLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEI 1152
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L R LP F + + Q+ +Y ++V+ +DL TI+ +++ G Y + D+
Sbjct: 1065 LYRQDPESLP--FRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQE-PWQYVDDI 1121
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
L+FNNA +Y K S + +L + EI
Sbjct: 1122 WLMFNNAWLYNRKTSRVYKYCSKLSEVFEQEI 1153
>sp|Q8H1D7|GTE5_ARATH Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana
GN=GTE5 PE=1 SV=1
Length = 487
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 308
+Y +V++ +DL T++T++ + Y + L F D+ L FNNAI+Y P
Sbjct: 165 DYHNIVKEPMDLGTVKTKLGKSLYKSP-LDFAEDVRLTFNNAILYNP 210
>sp|Q7Y214|GTE7_ARATH Transcription factor GTE7 OS=Arabidopsis thaliana GN=GTE7 PE=2 SV=1
Length = 590
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L++ H +F + ++Y ++V++ +DL T++ +++G Y + I F D+
Sbjct: 177 LVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSPI-DFATDV 235
Query: 297 LLLFNNAIVYFPKA 310
L F+NA+ Y PK
Sbjct: 236 RLTFDNAMTYNPKG 249
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 308
+Y +++ +DL TI++R+ +G YS+ L F D+ L F+N+I Y P
Sbjct: 194 DYFNVIKHPMDLGTIRSRLCKGEYSSP-LDFAADVRLTFSNSIAYNP 239
>sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana
GN=GTE3 PE=1 SV=1
Length = 461
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLR 321
+Y ++++ +DL T++TR+ + Y + L F D+ L FNNA++Y P A L
Sbjct: 152 DYHNIIKEPMDLGTVKTRLSKSLYKSP-LEFAEDVRLTFNNAMLYNPVGHDVYHMAEILL 210
Query: 322 NL 323
NL
Sbjct: 211 NL 212
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L R LP F + + Q+ +Y ++V+ +DL TI+ +++ G Y + D+
Sbjct: 1102 LYRQDPESLP--FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQE-PWQYVDDV 1158
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
L+FNNA +Y K S + +L + EI
Sbjct: 1159 WLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1190
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L R LP F + + Q+ +Y ++V+ +DL TI+ +++ G Y + D+
Sbjct: 1101 LYRQDPESLP--FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQE-PWQYVDDV 1157
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
L+FNNA +Y K S + +L + EI
Sbjct: 1158 WLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1189
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L R LP F + + Q+ +Y ++V+ +DL TI+ +++ G Y + D+
Sbjct: 1102 LYRQDPESLP--FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQE-PWQYVDDV 1158
Query: 297 LLLFNNAIVYFPKASLESEAAHQLRNLVSNEI 328
L+FNNA +Y K S + +L + EI
Sbjct: 1159 WLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEI 1190
>sp|Q9H0E9|BRD8_HUMAN Bromodomain-containing protein 8 OS=Homo sapiens GN=BRD8 PE=1 SV=2
Length = 1235
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 242 NHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFN 301
NH ++F + + + Y +V++ +DL TI+ +E G + F RD++L+F
Sbjct: 725 NHRYANVFLQPVTDDIAPG--YHSIVQRPMDLSTIKKNIENGLIRSTA-EFQRDIMLMFQ 781
Query: 302 NAIVY 306
NA++Y
Sbjct: 782 NAVMY 786
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 231 LIRLLDLIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACIL 290
L+ + +I +H P L + S+ Q YK++V++ +DL +++ + +G +
Sbjct: 1112 LLPVWKMIASHRFSSPFL---KPVSERQAPG-YKDVVKRPMDLTSLKRNLSKGRIRT-MA 1166
Query: 291 TFYRDLLLLFNNAIVY 306
F RDL+L+F NA++Y
Sbjct: 1167 QFLRDLMLMFQNAVMY 1182
>sp|Q8BSQ9|PB1_MOUSE Protein polybromo-1 OS=Mus musculus GN=Pbrm1 PE=1 SV=4
Length = 1634
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLR 321
+Y E+V Q +DL IQ +++ Y L D LLFNNA Y+ S E +AA +L
Sbjct: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNL-LTADFQLLFNNAKAYYKPDSPEYKAACKLW 141
Query: 322 NL 323
+L
Sbjct: 142 DL 143
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 248 LFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVY 306
LF++ L S+VQ + Y ++++ +DL+TI R++ GSY + I +D+ LL NA Y
Sbjct: 207 LFQK-LPSKVQYPD-YYAIIKEPIDLKTIAQRIQNGSYKS-IHAMAKDIDLLAKNAKTY 262
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 243 HHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNN 302
HH F++ + ++ +Y ++++Q +D+ TI+ R+E Y + T +D +FNN
Sbjct: 53 HHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI-QDFNTMFNN 111
Query: 303 AIVY 306
VY
Sbjct: 112 CYVY 115
>sp|Q90941|PB1_CHICK Protein polybromo-1 OS=Gallus gallus GN=PBRM1 PE=1 SV=1
Length = 1633
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSAC-ILTFYRDLLLLFNNAIVYFPKASLESEAAHQL 320
+Y E+V Q +DL IQ +++ Y +LT D LLFNNA Y+ S E +AA +L
Sbjct: 84 DYYEVVSQPIDLMKIQQKLKMEEYDDVNVLT--ADFQLLFNNAKAYYKPDSPEYKAACKL 141
Query: 321 RNL 323
L
Sbjct: 142 WEL 144
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 248 LFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVY 306
LF++ L S+VQ + Y ++++ +DL+TI R++ G+Y + I +D+ LL NA Y
Sbjct: 204 LFQK-LPSKVQYPD-YYAIIKEPIDLKTIAQRIQNGTYKS-IHAMAKDIDLLAKNAKTY 259
>sp|Q86U86|PB1_HUMAN Protein polybromo-1 OS=Homo sapiens GN=PBRM1 PE=1 SV=1
Length = 1689
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLR 321
+Y E+V Q +DL IQ +++ Y L D LLFNNA Y+ S E +AA +L
Sbjct: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNL-LTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
Query: 322 NL 323
+L
Sbjct: 142 DL 143
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 248 LFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVY 306
LF++ L S+VQ + Y ++++ +DL+TI R++ GSY + I +D+ LL NA Y
Sbjct: 207 LFQK-LPSKVQYPD-YYAIIKEPIDLKTIAQRIQNGSYKS-IHAMAKDIDLLAKNAKTY 262
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 231 LIRLLDLIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACIL 290
++ LL + H PS + +E +Y +++++ +DL T+++++E Y +
Sbjct: 351 MVTLLSELTNH----PSAWPFSTPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDS-FD 405
Query: 291 TFYRDLLLLFNNAIVYFPKASLESEAAHQLRNLVSNEIK 329
F D L+FNN Y ++ + A +L ++N+IK
Sbjct: 406 QFLYDARLIFNNCRSYNADSTTYFKNATKLEKFMNNKIK 444
>sp|Q6RI45|BRWD3_HUMAN Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens
GN=BRWD3 PE=1 SV=2
Length = 1802
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 227 ESEPLIRLLDLIRTHNHH----------LPSLFERRLKSQVQESNEYKELVRQHVDLETI 276
+SEP + DL+ H +P ER+ S + E +Y++++ VD T+
Sbjct: 1321 DSEPFRQPADLLSYPGHQEQEGESSESVVP---ERQQDSSLSE--DYQDVIDTPVDFSTV 1375
Query: 277 QTRVERGSYSACILTFYRDLLLLFNNAIVY 306
+ +E G+Y + L FY+D+ +FNN+ Y
Sbjct: 1376 KETLEAGNYGS-PLEFYKDVRQIFNNSKAY 1404
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 262 EYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLR 321
+Y ++ +DL T++ ++ G+YS C F D+ L F+NA+ Y P + A LR
Sbjct: 170 DYFNVIEHPMDLGTVKNKLTSGTYS-CPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLR 228
Query: 322 NL 323
Sbjct: 229 KF 230
>sp|Q9LXA7|GTE2_ARATH Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2
Length = 581
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 237 LIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDL 296
L++ H +F + ++Y +V + +DL T++ +E+G Y + I F D+
Sbjct: 182 LVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPI-DFASDV 240
Query: 297 LLLFNNAIVYFPKA 310
L F NA+ Y PK
Sbjct: 241 RLTFTNAMSYNPKG 254
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 197 VQSSASF---GIGTERKRGSAAAGGHIIEGTYAESEPLIRLLDLIRTHNHHLPSLFERRL 253
+QS A F + E +R + A ++ + T + E L L+ ++ H P +
Sbjct: 2528 LQSEAEFIDEYVCPECQRKNDANAANMKKLTSNDVEELKNLIKQMQLHKSAWPFMEPVDP 2587
Query: 254 KSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLE 313
K E+ +Y +++++ +DL+ ++ ++E +Y+ + F D+ +F+N Y PK S
Sbjct: 2588 K----EAPDYYKVIKEPMDLKRMEIKLESNTYTK-LSEFIGDMTKIFDNCRYYNPKESSF 2642
Query: 314 SEAAHQLRNLVSNEIK 329
+ A L + +IK
Sbjct: 2643 YKCAEALESYFVQKIK 2658
>sp|Q15326|ZMY11_HUMAN Zinc finger MYND domain-containing protein 11 OS=Homo sapiens
GN=ZMYND11 PE=1 SV=2
Length = 602
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 263 YKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLRN 322
Y+ LV VD+ TIQ +V G Y + F D LL +N ++++ S +++ A L
Sbjct: 188 YRRLVHSAVDVPTIQEKVNEGKYRS-YEEFKADAQLLLHNTVIFYGADSEQADIARMLYK 246
Query: 323 LVSNEI 328
+E+
Sbjct: 247 DTCHEL 252
>sp|Q8R5C8|ZMY11_MOUSE Zinc finger MYND domain-containing protein 11 OS=Mus musculus
GN=Zmynd11 PE=2 SV=2
Length = 602
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 263 YKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLRN 322
Y+ LV VD+ TIQ +V G Y + F D LL +N ++++ S +++ A L
Sbjct: 188 YRRLVHSAVDVPTIQEKVNEGKYRS-YEEFKADAQLLLHNTVIFYGADSEQADIARMLYK 246
Query: 323 LVSNEI 328
+E+
Sbjct: 247 DTCHEL 252
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 191 TPLSSDVQSSASFGIGTERKRGSAAAGGHIIEGTYAESEPLI-----------RLLDLIR 239
TP +S+V SFG+ R S G ++ T + EP+ LL +
Sbjct: 87 TP-ASNVSRPKSFGMS----RCSTGPGKRVLPFTATKPEPVTTSTMLRMKQCESLLKRLM 141
Query: 240 THNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLL 299
+ H LF + +Y +++ +DL T+++++ G+YS+ F D+ L
Sbjct: 142 SQQHCW--LFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS-EFSADVRLT 198
Query: 300 FNNAIVYFP 308
F NA+ Y P
Sbjct: 199 FRNAMTYNP 207
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 257 VQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEA 316
+ E +Y++ +++ +DL TI +VER Y + F D+ +F NA Y PK + +
Sbjct: 2061 LNEFPDYEKFIKKPMDLSTITKKVERTEY-LYLSQFVNDVNQMFENAKTYNPKGNAVFKC 2119
Query: 317 AHQLRNLVSNEI 328
A ++ + ++
Sbjct: 2120 AETMQEVFDKKL 2131
>sp|Q9HB58|SP110_HUMAN Sp110 nuclear body protein OS=Homo sapiens GN=SP110 PE=1 SV=5
Length = 689
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 243 HHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNN 302
HH+ ER+++ Q Q +Y E ++ + L+ ++ R+ Y+ + F RD+ L+F N
Sbjct: 589 HHVSKTLERQMQPQDQLIRDYGEPFQEAMWLDLVKERLITEMYT--VAWFVRDMRLMFRN 646
Query: 303 AIVYFPKAS--------LESEAAHQLRNLV 324
++ KAS LE+E L++++
Sbjct: 647 HKTFY-KASDFGQVGLDLEAEFEKDLKDVL 675
>sp|Q02206|RSC4_YEAST Chromatin structure-remodeling complex subunit RSC4
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RSC4 PE=1 SV=2
Length = 625
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 24/128 (18%)
Query: 206 GTERKRGSAAAGGHI---IEGTYAESEPLIRLLDLIRTHNHHLPSLFERRLKSQVQESNE 262
TE+K A G ++ SEP + L+D LP E
Sbjct: 185 ATEKKINQALLGASSPKNLDDKVKLSEPFMELVD-----KDELP---------------E 224
Query: 263 YKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLRN 322
Y E+V + L ++ +E G YS I F D+LL+F NA ++ ++L + A L N
Sbjct: 225 YYEIVHSPMALSIVKQNLEIGQYSK-IYDFIIDMLLVFQNAHIFNDPSALIYKDATTLTN 283
Query: 323 LVSNEIKR 330
+ I++
Sbjct: 284 YFNYLIQK 291
>sp|Q921C3|BRWD1_MOUSE Bromodomain and WD repeat-containing protein 1 OS=Mus musculus
GN=Brwd1 PE=1 SV=2
Length = 2304
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 257 VQESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 308
+ E +Y++++ +D T++ +E G+Y + + F +D+ L+F+NA Y P
Sbjct: 1346 LDEYPDYRDIIDTPMDFGTVRETLEAGNYDSPV-EFCKDIRLIFSNAKAYTP 1396
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 35.4 bits (80), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 259 ESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKAS 311
E +Y ++V +D +T+Q++ GSY + F DL L+F N +Y+ S
Sbjct: 1337 EIEDYTKVVTTPMDFQTMQSKCSCGSYQT-VQEFLNDLKLVFGNTELYYEAGS 1388
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 234 LLDLIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFY 293
+++L+R H+ P L +L S++Q + Y +++++ + L I+ +V + Y F
Sbjct: 1442 VVELVR-HDDSWPFL---KLVSKIQVPD-YYDIIKKPIALNIIREKVNKCEYKLAS-EFI 1495
Query: 294 RDLLLLFNNAIVYFPKASLESEAAHQLRNLV 324
D+ L+F+N Y P+ + E++A +L+
Sbjct: 1496 DDIELMFSNCFEYNPRNTSEAKAGTRLQAFF 1526
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 259 ESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFP 308
E +Y++++ +D T++ ++ G+Y + L F +D+ L+F+NA Y P
Sbjct: 1346 EYPDYRDIIDTPMDFGTVRETLDAGNYDS-PLEFCKDIRLIFSNAKAYTP 1394
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 35.0 bits (79), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 224 TYAESEPLIRLLDLIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERG 283
T + E L R+L ++ H P L ++ +Y ++++ +DL T++ RV+R
Sbjct: 2929 TEKDYEGLKRVLRSLQAHKMAWPFLE----PVDPNDAPDYYGVIKEPMDLATMEERVQRR 2984
Query: 284 SYSACILTFYRDLLLLFNNAIVYFPKASLESEAAHQLRNLVSNEIK 329
Y + F D+ +F+N Y P S + A L + ++K
Sbjct: 2985 YYEK-LTEFVADMTKIFDNCRYYNPSDSPFYQCAEVLESFFVQKLK 3029
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 34.7 bits (78), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 234 LLDLIRTHNHHLPSLFERRLKSQVQESNEYKELVRQHVDLETIQTRVERGSYSACILTFY 293
+++L+R H+ P L +L S++Q + Y +++++ + L I+ +V + Y F
Sbjct: 1441 VVELVR-HDDSWPFL---KLVSKIQVPD-YYDIIKKPIALNIIREKVNKCEYKLAS-EFI 1494
Query: 294 RDLLLLFNNAIVYFPKASLESEAAHQLRNLV 324
D+ L+F+N Y P+ + E++A +L+
Sbjct: 1495 DDIELMFSNCFEYNPRNTSEAKAGTRLQAFF 1525
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 259 ESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAAH 318
E +Y E++++ +DL T++ R+E SY + F D L+FNN Y + + + A+
Sbjct: 385 EVPDYYEVIKEPMDLSTMEQRLEADSYKT-MEEFVYDARLVFNNCRAYNNETTTYYKNAN 443
Query: 319 QLRNLVSNEIK 329
+L + +IK
Sbjct: 444 KLEKFMVAKIK 454
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 258 QESNEYKELVRQHVDLETIQTRVERGSYSACILTFYRDLLLLFNNAIVYFPKASLESEAA 317
+E +Y + +++ +DL T++ ++E Y + F D L+FNN +Y + + + A
Sbjct: 359 EEVPDYYDFIKEPMDLSTMEIKLESNKYQK-MEDFIYDARLVFNNCRMYNGENTSYYKYA 417
Query: 318 HQLRNLVSNEIK 329
++L +N++K
Sbjct: 418 NRLEKFFNNKVK 429
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,516,092
Number of Sequences: 539616
Number of extensions: 5522212
Number of successful extensions: 18486
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 18198
Number of HSP's gapped (non-prelim): 541
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)