BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019939
(333 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LY87|RGLG2_ARATH E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2
PE=1 SV=1
Length = 468
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 240/331 (72%), Positives = 276/331 (83%), Gaps = 6/331 (1%)
Query: 9 ARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPD 68
ARSF R+SLH IG NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSF +
Sbjct: 138 ARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSE 197
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEHSGGQYHVLVIIADGQVTR 128
++FCNGFEEVL RY+E+VP L+LAGPTSFAPII+MA+TIVE SGGQYHVLVIIADGQVTR
Sbjct: 198 DRFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTR 257
Query: 129 SVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQF 188
SVDTE+GQLS QE+KTV+AIV+AS+ PLSI+LVGVGDGPWDMMREFDDNIPARAFDNFQF
Sbjct: 258 SVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQF 317
Query: 189 VNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAALEFNILGAQRGKAVDRVSLPPPQYG 248
VNFTEIM+KN +S KE EFAL+ALMEIP QYKA +E N+LG + G +R LPPP G
Sbjct: 318 VNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRG 377
Query: 249 AASQ-NTPKTSRSSSFRPSAP-----SGHERVVGTAPPASSTSDNHVCPICLTDPKDMAF 302
+S N+PK SR SF+PS P H R PP SS SDN +CPICL++PKDMAF
Sbjct: 378 GSSSYNSPKPSRLPSFKPSVPPHPTEGYHVRSSPVPPPTSSASDNQLCPICLSNPKDMAF 437
Query: 303 GCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
GCGHQTCC CG DL +CPICR+ IQTRIKLY
Sbjct: 438 GCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1
PE=1 SV=1
Length = 489
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/325 (71%), Positives = 269/325 (82%), Gaps = 7/325 (2%)
Query: 9 ARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPD 68
A+SF R+SLHH+ + NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSFYP+
Sbjct: 172 AKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPE 231
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEHSGGQYHVLVIIADGQVTR 128
+FCNGFEEVL RYRE+VP L+LAGPTSFAPIIEMA+T+VE S GQYHVLVIIADGQVTR
Sbjct: 232 GRFCNGFEEVLARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTR 291
Query: 129 SVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQF 188
SVDTEHG+LS QE+KTV+AIVKAS PLSI+LVGVGDGPWDMM+EFDDNIPARAFDNFQF
Sbjct: 292 SVDTEHGRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQF 351
Query: 189 VNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAALEFNILGAQRGKAVDRVSLPPPQYG 248
VNFTEIMSKN D+SRKE EFAL+ALMEIP QYKA +E N+LG + G R+ LPPP
Sbjct: 352 VNFTEIMSKNKDQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPP--- 408
Query: 249 AASQNTPKTSRSSSFRPSAPSGHERVVGTAPPASSTSDNHVCPICLTDPKDMAFGCGHQT 308
S ++ +SR +F PS P + SS D +CPICL++PK+MAFGCGHQT
Sbjct: 409 VQSGSSFSSSRIPNFEPSVPP----YPFESKQMSSADDIQLCPICLSNPKNMAFGCGHQT 464
Query: 309 CCGCGQDLDLCPICRSFIQTRIKLY 333
CC CG DL +CPICR+ IQTRIKLY
Sbjct: 465 CCECGPDLKVCPICRAPIQTRIKLY 489
>sp|Q09221|CPNA2_CAEEL Copine family protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=4
Length = 7705
Score = 227 bits (579), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 120/230 (52%), Positives = 146/230 (63%), Gaps = 24/230 (10%)
Query: 10 RSFQRRSLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSF--- 65
R+F +R LH I + NPY+Q I I+GKTLSSFD D IP +GFGD D +F+
Sbjct: 7492 RTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAER 7551
Query: 66 YPDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEHSGGQYHVLVIIADGQ 125
Y EK CNGFEEVLR Y E+ P + ++GPT+F P+I+ AI I + YH+LVI+ADGQ
Sbjct: 7552 YDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLIDRAIEICKEKHS-YHILVIVADGQ 7610
Query: 126 VTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDN 185
VT EK +AI AS YPLSII+VGVGDGPW+MM FDDNIP R FDN
Sbjct: 7611 VT------------NEKINQKAIAAASHYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDN 7658
Query: 186 FQFVNFTEIM--SKNVDRSRKEAEFALAALMEIPSQYKAALEFNILGAQR 233
F FV+F ++M + N D A FAL ALMEIP QYKA E +L R
Sbjct: 7659 FHFVDFHKVMFNAPNAD-----ASFALNALMEIPDQYKAIKELGLLKHSR 7703
>sp|Q99829|CPNE1_HUMAN Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1
Length = 537
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 16 SLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH++ N Y A+ +G + +D D L P FGFG D +V +F P
Sbjct: 304 SLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSN 363
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITI---VEHSG--GQYHVLVIIADG 124
+C G + ++ YR+ +P +RL GPT+FAPII H G QY +L+++ DG
Sbjct: 364 PYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDG 423
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIP---- 179
VT D E T EA+V+AS P+S+I+VGVG ++ M + D D P
Sbjct: 424 AVT---DVE---------ATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTR 471
Query: 180 ---ARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A A D QFV + + + +EA A L E+P+Q
Sbjct: 472 SGQAAARDIVQFVPY-----RRFQNAPREA-LAQTVLAEVPTQ 508
>sp|Q96FN4|CPNE2_HUMAN Copine-2 OS=Homo sapiens GN=CPNE2 PE=1 SV=3
Length = 548
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 105/225 (46%), Gaps = 41/225 (18%)
Query: 16 SLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFYPDE 69
SLH+I N Y AI +G+ + +D D + P GFG D + +F P
Sbjct: 326 SLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTN 385
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
FC+G + + + Y +PH+R GPT+F+PI+ A + + QY +L+II DG
Sbjct: 386 PFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATQYFILLIITDG 445
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVG----------DGPWDMMREF 174
++ +T H A+V+AS+ P+SII+VGVG DG M+R
Sbjct: 446 VISDMEETRH------------AVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSH 493
Query: 175 DDNIPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
AR D QFV F E R+ + A A L E+P Q
Sbjct: 494 TGEEAAR--DIVQFVPFREF------RNAAKETLAKAVLAELPQQ 530
>sp|Q86YQ8|CPNE8_HUMAN Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2
Length = 564
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 27/227 (11%)
Query: 13 QRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFY 66
Q SLH++ Q N Y A+ +G+ + +D D + P GFG D + +
Sbjct: 325 QPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGN 384
Query: 67 PDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADG 124
P +C+G E V+ Y + ++L GPT+FAP+I G QY VL+I+ DG
Sbjct: 385 PQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDG 444
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPAR 181
+ S +T E+IV AS+ P+SII+VGVG +D M E D + + +R
Sbjct: 445 VI------------SDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSR 492
Query: 182 A----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAAL 224
D QFV F + + ++ + A A L EIP Q+ + +
Sbjct: 493 GKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYM 539
>sp|Q9DC53|CPNE8_MOUSE Copine-8 OS=Mus musculus GN=Cpne8 PE=2 SV=2
Length = 564
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 27/227 (11%)
Query: 13 QRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFY 66
Q SLH++ Q N Y A+ +G+ + +D D + P GFG D + +
Sbjct: 325 QPTSLHYMNPYQLNAYGMALKAVGEIVQDYDSDKMFPALGFGAKLPPDGRISHEFALNGN 384
Query: 67 PDEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE--HSGGQYHVLVIIADG 124
P +C+G E V+ Y + ++L GPT+FAP+I G QY VL+I+ DG
Sbjct: 385 PQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVINHVARYASSVKDGSQYFVLLIVTDG 444
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPAR 181
+ S +T E+IV AS+ P+SII+VGVG +D M E D + + +R
Sbjct: 445 VI------------SDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVSSR 492
Query: 182 A----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAAL 224
D QFV F + + ++ + A A L EIP Q+ + +
Sbjct: 493 GKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYM 539
>sp|Q0VE82|CPNE7_MOUSE Copine-7 OS=Mus musculus GN=Cpne7 PE=2 SV=1
Length = 557
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 117/245 (47%), Gaps = 42/245 (17%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLHHI Q N Y +A+ +G+ +D D GFG EV +F P++
Sbjct: 325 SLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPED 384
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA--ITIVEHSGG---QYHVLVIIADG 124
C G + V+ Y+ +P ++L GPT+ APII + E S G QY++L+I+ DG
Sbjct: 385 DECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDG 444
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA- 182
VT DT EAIV+AS P+S+I+VGVG+ + M+ D D+ R+
Sbjct: 445 VVTDMSDTR------------EAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSP 492
Query: 183 ------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ---YKAALEF--NILGA 231
D QFV F E+ ++ A A L E+P Q Y + E LGA
Sbjct: 493 RGEPALRDIVQFVPFREL------KNASPAALAKCVLAEVPKQVVEYYSHKELPPRSLGA 546
Query: 232 QRGKA 236
Q G+A
Sbjct: 547 QTGEA 551
>sp|Q8C166|CPNE1_MOUSE Copine-1 OS=Mus musculus GN=Cpne1 PE=1 SV=1
Length = 536
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 109/223 (48%), Gaps = 37/223 (16%)
Query: 16 SLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH++ N Y A+ +G + +D D L P FGFG D +V +F P
Sbjct: 303 SLHYLSPTGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSN 362
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
+C G + ++ YR+ +P +RL GPT+FAPII A + S QY VL+++ DG
Sbjct: 363 PYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAQQRSASQYFVLLLLTDG 422
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPAR-- 181
VT D E T +A+V AS+ P+S+I+VGVG +++M + D D P R
Sbjct: 423 AVT---DVE---------ATCKAVVDASKLPMSVIIVGVGGADFEVMEQLDADGGPLRTR 470
Query: 182 -----AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A D QFV + +N R A L E+P+Q
Sbjct: 471 SGEAAARDIVQFVPYRRF--QNAPRE----TLAQTVLAEVPTQ 507
>sp|Q9HCH3|CPNE5_HUMAN Copine-5 OS=Homo sapiens GN=CPNE5 PE=1 SV=2
Length = 593
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 13 QRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP---- 67
Q SLH++ Q N Y A++ +G+ + +D D + P GFG D V +P
Sbjct: 344 QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN 403
Query: 68 -DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAI--TIVEHSGGQYHVLVIIADG 124
+ C G + +L Y + ++L GPT+FAP++ G QY VL+II DG
Sbjct: 404 QENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG 463
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPAR 181
+ S +T EAIV A++ P+SII+VGVG +D M E D + I +R
Sbjct: 464 VI------------SDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSR 511
Query: 182 A----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAALE 225
D QFV F + + + + A A L EIP Q + ++
Sbjct: 512 GKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMK 559
>sp|P59108|CPNE2_MOUSE Copine-2 OS=Mus musculus GN=Cpne2 PE=2 SV=1
Length = 548
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 37/223 (16%)
Query: 16 SLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH+I N Y AI +G+ + +D D + P GFG D +V +F P
Sbjct: 326 SLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTN 385
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
FC+G + + + Y +PH+R GPT+F+PI+ A + + QY +L+II DG
Sbjct: 386 PFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQQTATQYFILLIITDG 445
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPAR-- 181
++ +T H A+V+AS+ P+SII+VGVG+ + M D DN R
Sbjct: 446 VISDMEETRH------------AVVQASKLPMSIIIVGVGNADFAAMEFLDGDNRRLRSH 493
Query: 182 -----AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A D QFV F E R+ + A A L E+P Q
Sbjct: 494 TGEEAARDIVQFVPFREF------RNAAKETLAKAVLAELPQQ 530
>sp|Q8JZW4|CPNE5_MOUSE Copine-5 OS=Mus musculus GN=Cpne5 PE=2 SV=1
Length = 593
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 13 QRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP---- 67
Q SLH++ Q N Y A++ +G+ + +D D + P GFG D V +P
Sbjct: 344 QSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFPLNGN 403
Query: 68 -DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAI--TIVEHSGGQYHVLVIIADG 124
+ C G + +L Y + ++L GPT+FAP++ G QY VL+II DG
Sbjct: 404 QENPSCCGIDGILEAYHSSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLLIITDG 463
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPAR 181
+ S +T EAIV A++ P+SII+VGVG +D M E D + I +R
Sbjct: 464 VI------------SDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSR 511
Query: 182 A----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAALE 225
D QFV F + + + + A A L EIP Q + ++
Sbjct: 512 GKLAERDIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMK 559
>sp|Q5BJS7|CPNE9_RAT Copine-9 OS=Rattus norvegicus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 12 FQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP--- 67
Q SLH++ Q + Y A+ +G+ + +D D L P +GFG + + +P
Sbjct: 314 LQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNN 373
Query: 68 --DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEH--SGGQYHVLVIIAD 123
++ C G E VL Y + + ++L GPT FAP+I G QY+VL+II D
Sbjct: 374 NDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITD 433
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPA 180
G + S +T EAIV AS P+SII+VGVG ++ M E D + + +
Sbjct: 434 GVI------------SDMTQTKEAIVSASSLPMSIIIVGVGPAMFEAMEELDGDDVRVSS 481
Query: 181 RA----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
R D QFV F + + ++ ++ A A L EIP Q
Sbjct: 482 RGRYAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQ 524
>sp|Q1RLL3|CPNE9_MOUSE Copine-9 OS=Mus musculus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 12 FQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP--- 67
Q SLH++ Q + Y A+ +G+ + +D D L P +GFG + + +P
Sbjct: 314 LQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNN 373
Query: 68 --DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEH--SGGQYHVLVIIAD 123
++ C G E VL Y + + ++L GPT FAP+I G QY+VL+II D
Sbjct: 374 NDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITD 433
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPA 180
G + S +T EAIV AS P+SII+VGVG ++ M E D + + +
Sbjct: 434 GVI------------SDMTQTKEAIVSASSLPMSIIIVGVGPAMFEAMEELDGDDVRVSS 481
Query: 181 RA----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
R D QFV F + + ++ ++ A A L EIP Q
Sbjct: 482 RGRYAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQ 524
>sp|Q8IYJ1|CPNE9_HUMAN Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=3
Length = 553
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 12 FQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP--- 67
Q SLH++ Q + Y A+ +G+ + +D D L P +GFG + + +P
Sbjct: 314 LQPTSLHYMSPYQLSAYAMALKAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNN 373
Query: 68 --DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEH--SGGQYHVLVIIAD 123
++ C G E VL Y + + ++L GPT FAP+I G QY+VL+II D
Sbjct: 374 NDEDPNCAGIEGVLESYFQSLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITD 433
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN---IPA 180
G + S +T EAIV AS P+SII+VGVG ++ M E D + + +
Sbjct: 434 GVI------------SDMTQTKEAIVSASSLPMSIIIVGVGPAMFEAMEELDGDDVRVSS 481
Query: 181 RA----FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
R D QFV F + + ++ ++ A A L EIP Q
Sbjct: 482 RGRYAERDIVQFVPFRDYVDRSGNQVLSMARLAKDVLAEIPEQ 524
>sp|Q8BT60|CPNE3_MOUSE Copine-3 OS=Mus musculus GN=Cpne3 PE=1 SV=2
Length = 533
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 16 SLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH+I + N Y AI +G + +D D + P FGFG +V +F P
Sbjct: 310 SLHYISPNGVNEYLTAIWSVGLVIQDYDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSN 369
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
+CNG + ++ YR +P +RL GPT+F+PII A + + QY VL+II DG
Sbjct: 370 PYCNGIQGIVEAYRTCLPQIRLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDG 429
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA- 182
+T +T +AIV A++ P+SII+VGVG + M D D RA
Sbjct: 430 VIT------------DLDETRQAIVNAAKLPMSIIIVGVGGADFSAMEFLDGDGGSLRAP 477
Query: 183 ------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
D QFV F + + + KEA A L EIP Q
Sbjct: 478 SGEVAIRDIVQFVPFRQFQN-----APKEA-LAQCVLAEIPQQ 514
>sp|Q9UBL6|CPNE7_HUMAN Copine-7 OS=Homo sapiens GN=CPNE7 PE=2 SV=1
Length = 633
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 37/223 (16%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH+I Q N Y +A+ +G+ +D D GFG EV +F P++
Sbjct: 401 SLHYINPYQPNEYLKALVSVGEICQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPED 460
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA--ITIVEHSGG---QYHVLVIIADG 124
C G + V+ Y+ +P ++L GPT+ APII + E S G QY++L+I+ DG
Sbjct: 461 DECEGIQGVVEAYQNCLPRVQLYGPTNVAPIISKVARVAAAEESTGKASQYYILLILTDG 520
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA- 182
VT DT EAIV+AS P+SII+VGVG+ + M+ D D+ R+
Sbjct: 521 VVTDMADTR------------EAIVRASRLPMSIIIVGVGNADFTDMQVLDGDDGVLRSP 568
Query: 183 ------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
D QFV F E+ ++ A A L E+P Q
Sbjct: 569 RGEPALRDIVQFVPFREL------KNASPAALAKCVLAEVPKQ 605
>sp|O75131|CPNE3_HUMAN Copine-3 OS=Homo sapiens GN=CPNE3 PE=1 SV=1
Length = 537
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 16 SLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH+I + N Y A+ +G + +D D + P FGFG +V +F P
Sbjct: 310 SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSN 369
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
+CNG + ++ YR +P ++L GPT+F+PII A + + QY VL+II DG
Sbjct: 370 PYCNGIQGIVEAYRSCLPQIKLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDG 429
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA- 182
+T +T +AIV AS P+SII+VGVG + M D D R+
Sbjct: 430 VITDLDETR------------QAIVNASRLPMSIIIVGVGGADFSAMEFLDGDGGSLRSP 477
Query: 183 ------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
D QFV F + + + KEA A L EIP Q
Sbjct: 478 LGEVAIRDIVQFVPFRQFQN-----APKEA-LAQCVLAEIPQQ 514
>sp|Q8BLR2|CPNE4_MOUSE Copine-4 OS=Mus musculus GN=Cpne4 PE=1 SV=1
Length = 557
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGD------ASTHDQEVFSFYPD 68
SLH+I Q N Y +A+ +G+ +D D + P FGFG +HD + +F D
Sbjct: 326 SLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAI-NFNED 384
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-MAITIVEHS----GGQYHVLVIIAD 123
C G + V+ Y+ +P L+L GPT+ APII+ +A + E + QY +L+I+ D
Sbjct: 385 NPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTD 444
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA 182
G +T DT EAIV AS P+S+I+VGVG+ + M+ D D+ R+
Sbjct: 445 GVITDMADTR------------EAIVHASHLPMSVIIVGVGNADFSDMQMLDGDDGILRS 492
Query: 183 -------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
D QFV F + A A + L E+P+Q
Sbjct: 493 PKGEPVLRDIVQFVPFRNF------KHASPAALAKSVLAEVPNQ 530
>sp|Q96A23|CPNE4_HUMAN Copine-4 OS=Homo sapiens GN=CPNE4 PE=2 SV=1
Length = 557
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGD------ASTHDQEVFSFYPD 68
SLH+I Q N Y +A+ +G+ +D D + P FGFG +HD + +F D
Sbjct: 326 SLHYIHPYQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAI-NFNED 384
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-MAITIVEHS----GGQYHVLVIIAD 123
C G + V+ Y+ +P L+L GPT+ APII+ +A + E + QY +L+I+ D
Sbjct: 385 NPECAGIQGVVEAYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTD 444
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPARA 182
G +T DT EAIV AS P+S+I+VGVG+ + M+ D D+ R+
Sbjct: 445 GVITDMADTR------------EAIVHASHLPMSVIIVGVGNADFSDMQMLDGDDGILRS 492
Query: 183 -------FDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
D QFV F + A A + L E+P+Q
Sbjct: 493 PKGEPVLRDIVQFVPFRNF------KHASPAALAKSVLAEVPNQ 530
>sp|Q5RAE1|CPNE3_PONAB Copine-3 OS=Pongo abelii GN=CPNE3 PE=2 SV=1
Length = 537
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 105/225 (46%), Gaps = 41/225 (18%)
Query: 16 SLHHIG-DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDE 69
SLH+I + N Y A+ +G + +D D + P FGFG +V +F P
Sbjct: 310 SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSN 369
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIE-----MAITIVEHSGGQYHVLVIIADG 124
+CNG + ++ YR +P ++L GPT+F+PII A + + QY VL+II DG
Sbjct: 370 PYCNGIQGIVEAYRSCLPQIKLYGPTNFSPIINHVARFAAAAAQQQTASQYFVLLIITDG 429
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN------- 177
+T +T +AIV AS P+SII+VGVG + M D +
Sbjct: 430 VITDLDETR------------QAIVNASRLPMSIIIVGVGGADFSAMEFLDGDGGGLRSP 477
Query: 178 ---IPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
+ R D QFV F + + + KEA A L EIP Q
Sbjct: 478 SGEVAIR--DIVQFVPFRQFQN-----APKEA-LAQCVLAEIPQQ 514
>sp|Q9Z140|CPNE6_MOUSE Copine-6 OS=Mus musculus GN=Cpne6 PE=1 SV=1
Length = 557
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 15 RSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPD 68
+SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+
Sbjct: 324 QSLHCLSPRQPNHYLQALRTVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIAD 123
C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTD 443
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPAR- 181
G V+ +T AIV+AS P+SII+VGVG+ + MR D D+ P R
Sbjct: 444 GVVSDMAETR------------TAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRC 491
Query: 182 ------AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A D QFV F + + + A L E+P Q
Sbjct: 492 PKGVPAARDIVQFVPFRDF------KDAAPSALAKCVLAEVPRQ 529
>sp|O95741|CPNE6_HUMAN Copine-6 OS=Homo sapiens GN=CPNE6 PE=1 SV=3
Length = 557
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 15 RSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPD 68
+SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+
Sbjct: 324 QSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIAD 123
C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTD 443
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPAR- 181
G V+ +T AIV+AS P+SII+VGVG+ + MR D D+ P R
Sbjct: 444 GVVSDMAETR------------TAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRC 491
Query: 182 ------AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A D QFV F + + + A L E+P Q
Sbjct: 492 PRGVPAARDIVQFVPFRDF------KDAAPSALAKCVLAEVPRQ 529
>sp|Q5R4W6|CPNE6_PONAB Copine-6 OS=Pongo abelii GN=CPNE6 PE=2 SV=1
Length = 557
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 102/224 (45%), Gaps = 37/224 (16%)
Query: 15 RSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPD 68
+SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+
Sbjct: 324 QSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIAD 123
C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTD 443
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DNIPAR- 181
G V+ +T AIV+AS P+SII+VGVG+ + MR D D+ P R
Sbjct: 444 GVVSDMAETR------------TAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLRC 491
Query: 182 ------AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
A D QFV F + + + A L E+P Q
Sbjct: 492 PRGVPAARDIVQFVPFRDF------KDAAPSALAKRVLAEVPRQ 529
>sp|Q2KHY1|CPNE6_BOVIN Copine-6 OS=Bos taurus GN=CPNE6 PE=2 SV=1
Length = 557
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 15 RSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPD 68
+SLH + Q N Y QA+ +G +D D P FGFG + EV +F P+
Sbjct: 324 QSLHCLSPRQPNHYLQALRAVGGICQDYDSDKRFPAFGFGARIPPNFEVSHDFAINFDPE 383
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIV--EHSGGQ---YHVLVIIAD 123
C V+ YR +P ++L GPT+ APII E S GQ Y VL+++ D
Sbjct: 384 NPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVAGPAQREQSTGQATKYSVLLVLTD 443
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN------ 177
G V+ +T AIV+AS P+SII+VGVG+ + MR D +
Sbjct: 444 GVVSDMAETR------------TAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGTLRC 491
Query: 178 ---IPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
+PA A D QFV F + + + A L E+P Q
Sbjct: 492 PRGVPA-ARDIVQFVPFRDF------KDASPSALAKCVLAEVPRQ 529
>sp|Q7YXU4|CPNA_DICDI Copine-A OS=Dictyostelium discoideum GN=cpnA PE=2 SV=1
Length = 600
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 99/212 (46%), Gaps = 35/212 (16%)
Query: 25 NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYP-----DEKFCNGFEEVL 79
N Y AI +G + + LIP +GFG EV +P C G VL
Sbjct: 315 NQYANAICSVGNVIVPYTTTPLIPVYGFGGIMPGQSEVSHCFPMTLNASNTLCCGVNGVL 374
Query: 80 RRYRELVPHLRLAGPTSFAPIIEMAITIVEH----SGGQYHVLVIIADGQVTRSVDTEHG 135
Y + + ++L GPT FAP+I MA S +Y +L+II DG++ +D ++
Sbjct: 375 DCYYDNISKIQLHGPTYFAPLINMAARYASQGQSQSNQKYTILMIITDGEI---LDADN- 430
Query: 136 QLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPA------RA-FDNFQF 188
T++AIVK+S PLSII+VGVG+ + M D + A RA D QF
Sbjct: 431 --------TIDAIVKSSGLPLSIIIVGVGNANFTNMNILDGDDAALQSGGVRAERDIVQF 482
Query: 189 VNFTEIMSKNVDRSRKEAEFALAALMEIPSQY 220
V + ++ + E A L EIP+Q+
Sbjct: 483 VAMRDYLN-------RPNELAAEVLREIPTQF 507
>sp|Q54FY7|CPNE_DICDI Copine-E OS=Dictyostelium discoideum GN=cpnE PE=2 SV=1
Length = 579
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 27/173 (15%)
Query: 14 RRSLHH-IGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFG-----DASTHDQEVFSFYP 67
R SLH+ ++ Y ++I +G L+ +D D I GFG ++H F F P
Sbjct: 362 RTSLHYNTPTHESEYARSILAVGNVLAPYDSDGKIELLGFGAERFGGVTSH---CFQFGP 418
Query: 68 DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA----ITIVEHSGGQYHVLVIIAD 123
+ G EEVL Y +++P ++L+ PT+F II+ A I V+ +Y +L+I+ D
Sbjct: 419 KAE-ARGIEEVLSTYNKVIPTIKLSYPTNFQEIIKHAHKKSIKGVDSKNQKYTILLILTD 477
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKAS-EYPLSIILVGVGDGPWDMMREFD 175
G++T D E T+E IVKAS + PLSI++VGVG +++M++ D
Sbjct: 478 GEIT---DMEE---------TIEEIVKASSKAPLSIVIVGVGIASFELMKKLD 518
>sp|Q5S1W2|BON2_ARATH Protein BONZAI 2 OS=Arabidopsis thaliana GN=BON2 PE=1 SV=2
Length = 586
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 16 SLHHIG--DDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV---FSFYPDEK 70
SLH+I N Y++AI +G+ L +D D P +GFG A D V F+
Sbjct: 363 SLHYIDPTGRLNAYQRAIVEVGEVLQFYDSDKRFPAWGFG-ARPIDIPVSHCFNLNGSST 421
Query: 71 FC--NGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITI----VEHSGGQYHVLVIIADG 124
+C +G + ++ Y + ++ AGPT F P+I A TI + S +Y+VL+II DG
Sbjct: 422 YCEVDGIQGIMNAYNGALFNVSFAGPTLFGPVINAAATIASDSLAQSAKKYYVLLIITDG 481
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN------- 177
+T ++T ++IV AS+ PLSI++VGVG + M D +
Sbjct: 482 VIT------------DLQETRDSIVSASDLPLSILIVGVGGADYKEMEVLDGDKGEKLES 529
Query: 178 ----IPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQY 220
I +R D QFV +I E A L E+P+Q+
Sbjct: 530 SSGRIASR--DIVQFVALRDI-------QYGEVSVVEALLAELPTQF 567
>sp|Q9XUB9|NRA1_CAEEL Nicotinic receptor-associated protein 1 OS=Caenorhabditis elegans
GN=nra-1 PE=3 SV=1
Length = 634
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 127/299 (42%), Gaps = 57/299 (19%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDE----- 69
SLH + D+ N YE A+ + ++ FGFG + V + +P +
Sbjct: 357 SLHFMSADRPNQYELALRSVLSICQHYNSSKTFEAFGFGAKLPNQSSVSAIFPLDLQRGT 416
Query: 70 KFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE---HSGGQYHVLVIIADGQV 126
G V+ YR + +++L GPT+FAPIIE + H +Y +L+II DG +
Sbjct: 417 SEVVGITGVMTAYRHALSNVQLYGPTNFAPIIENVARKAQNMIHDSARYQILLIITDGII 476
Query: 127 TRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN--------- 177
S T+ +I+ AS PLSII++GVG+ ++ M E D +
Sbjct: 477 ------------SDMHATIRSIISASGLPLSIIIIGVGNEDFEKMHELDSDDALLQQDSR 524
Query: 178 IPARAFDNFQFVNFTEIMSKN----VDRSRKEAEFALAALMEIPSQYKAALEFNILGAQR 233
I R D QFV E ++ +D + A L E+P+Q ++ QR
Sbjct: 525 IAQR--DIVQFVTMREFLNNGQGLYLDPDVIQENLAREVLYEVPAQLTGYMK------QR 576
Query: 234 G---KAVD---RVSLPPPQYGAASQNTPKTSRSSSFRPSAPSGHE------RVVGTAPP 280
G + VD R PPP++ T R + + P+G + + +APP
Sbjct: 577 GFQPRPVDDPWRRDSPPPEFDPILDG---TGRRAPMLQAPPAGFQYPVYADTSIASAPP 632
>sp|Q941L3|BON1_ARATH Protein BONZAI 1 OS=Arabidopsis thaliana GN=BON1 PE=1 SV=2
Length = 578
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 40/225 (17%)
Query: 16 SLHHI--GDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV---FSFYPDEK 70
SLH+I N Y++AI +G+ L +D D P +GFG A D V F+
Sbjct: 360 SLHYIDPSGRLNAYQRAIMDVGEVLQFYDSDKRFPAWGFG-ARPIDAPVSHCFNLNGSSS 418
Query: 71 F--CNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEHSGGQ----YHVLVIIADG 124
+ +G + ++ Y + ++ LAGPT F P+I A I S Q Y+VL+II DG
Sbjct: 419 YSEVDGIQGIMTSYTSALFNVSLAGPTLFGPVINAAAMIASASLAQGSRKYYVLLIITDG 478
Query: 125 QVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPAR--- 181
+T ++T +A+V AS+ PLSI++VGVG + M D + R
Sbjct: 479 VIT------------DLQETKDALVSASDLPLSILIVGVGGADFKEMEILDADKGERLES 526
Query: 182 ------AFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQY 220
+ D QFV ++ E A L E+PSQ+
Sbjct: 527 SSGRLASRDIVQFVALRDV-------QYGEISVVQALLAELPSQF 564
>sp|A8WMY4|NRA1_CAEBR Nicotinic receptor-associated protein 1 OS=Caenorhabditis briggsae
GN=nra-1 PE=3 SV=2
Length = 629
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 124/294 (42%), Gaps = 56/294 (19%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKF--- 71
SLH++ D+ N YE A+ + ++ FGFG + V + + +
Sbjct: 361 SLHYMSADRPNQYELALRSVLSICQHYNSSKTFEAFGFGAKLPNSVSVSAIFSLDLLRGT 420
Query: 72 --CNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVE---HSGGQYHVLVIIADGQV 126
G V+ YR + +++L GPT+FAPII+ + H +Y +L+II DG +
Sbjct: 421 PEVVGISGVMSAYRHALQNVQLYGPTNFAPIIDTVAQKAQNMIHDSARYQILLIITDGII 480
Query: 127 TRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN--------- 177
S T+ +I+ AS PLSII++GVG+ ++ M E D +
Sbjct: 481 ------------SDMHATIRSIINASGLPLSIIIIGVGNEDFEKMHELDSDDSLLQQDSR 528
Query: 178 IPARAFDNFQFVNFTEIMSKN----VDRSRKEAEFALAALMEIPSQYKAALEFNILGAQR 233
I R D QFV E ++ +D + A L E+P Q ++ QR
Sbjct: 529 IAQR--DIVQFVTIREFLNNGRGVYLDPDVVQENLAREVLFEVPGQLTGYMK------QR 580
Query: 234 G---KAVDR---VSLPPPQYGAASQNTPKTSRSSSFRPSAPS-GHERVVGTAPP 280
G + V+ + PPP Y + R APS G + V +APP
Sbjct: 581 GFQPRPVENPWTRNSPPPDYDPVLDGIGR-------RAQAPSPGFQMPVASAPP 627
>sp|Q5XQC7|BON3_ARATH Protein BONZAI 3 OS=Arabidopsis thaliana GN=BON3 PE=1 SV=1
Length = 584
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 16 SLHHI--GDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSF------YP 67
SLH+I N Y+QAI +G+ + +D D P +GFG ++ +F Y
Sbjct: 363 SLHYIDPSGRLNSYQQAIMEVGEVIQFYDSDKRFPAWGFGGRTSDGSVSHAFNLNGASYG 422
Query: 68 DEKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEHSGGQ----YHVLVIIAD 123
DE G E ++ Y + ++ LAGPT F+ +++ A S Q Y VL+II D
Sbjct: 423 DEVV--GVEGIMVAYASALRNVSLAGPTLFSNVVDKAAHTASQSLSQNSPKYFVLLIITD 480
Query: 124 GQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-DN----- 177
G +T TV+A+V+AS+ PLS+++VGVG+ + M D DN
Sbjct: 481 GVLT------------DMAGTVDALVRASDLPLSVLIVGVGNTDFKQMEMLDADNGRRLE 528
Query: 178 -----IPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQY 220
I R D QFV +I S V A L E+P Q+
Sbjct: 529 SSTGRIATR--DIVQFVPMKDIHSGLV-------SVVQALLEELPGQF 567
>sp|Q54P51|CPNC_DICDI Copine-C OS=Dictyostelium discoideum GN=cpnC PE=2 SV=1
Length = 539
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 96/208 (46%), Gaps = 34/208 (16%)
Query: 27 YEQAISIIGKTLSSFDEDNLIPCFGFG---DASTHDQEVFSFYPDEKFCNGFEEVLRRYR 83
Y ++I+ +G LSS+D D I FGFG T FS P+ G VL Y
Sbjct: 322 YARSIASVGSVLSSYDSDGFIDVFGFGGEYQGRTSHCFPFSLDPNVPSAFGVAGVLEMYN 381
Query: 84 ELVPHLRLAGPTSFAPIIEMAITIVEHS----GGQYHVLVIIADGQVTRSVDTEHGQLSS 139
+ + +GPT+FA +I+ AI S +Y VL+II DG++
Sbjct: 382 RNISKIPFSGPTNFASVIQEAIARASESRLPYQQKYTVLLIITDGEIC------------ 429
Query: 140 QEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD-------DNIPARA-FDNFQFVNF 191
+T++ +V+AS PLS+++VGVG ++ M D D RA D QFV F
Sbjct: 430 DMDETIKCLVQASNLPLSVVIVGVGLSSFENMNLLDGDNGCLVDYKGNRAKRDIVQFVPF 489
Query: 192 TEIMSKNVDRSRKEAEFALAALMEIPSQ 219
+ S N++ +E L EIP Q
Sbjct: 490 NK-YSGNINALAQE------TLKEIPGQ 510
>sp|Q86K21|CPNB_DICDI Copine-B OS=Dictyostelium discoideum GN=cpnB-1 PE=2 SV=1
Length = 530
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 16 SLH-HIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKFCNG 74
SLH H + Y ++I +G L+ +D D I GFG + +K G
Sbjct: 313 SLHYHTPSHPSQYAKSIFSVGSVLAPYDSDGNIEVLGFGGIHRGSTSHCFQFGSKKEVRG 372
Query: 75 FEEVLRRYRELVPHLRLAGPTSFAPIIEMA----ITIVEHSGGQYHVLVIIADGQVTRSV 130
E VL Y E++P + L+ PT+F II A + V +Y +L+I+ DG++
Sbjct: 373 VEGVLLTYGEVIPSMSLSYPTNFKDIISYAAKKSLDGVTSKSQKYTILLILTDGEI---- 428
Query: 131 DTEHGQLSSQEKKTVEAIVKAS-EYPLSIILVGVGDGPWDMMREFD 175
S +TV IVKAS + PLSI+++G+G+ +D M D
Sbjct: 429 --------SDMNETVHEIVKASKQSPLSIVIIGIGEATFDNMNRLD 466
>sp|Q55GG1|CPND_DICDI Copine-D OS=Dictyostelium discoideum GN=cpnD PE=2 SV=1
Length = 530
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 16 SLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDA-STHDQEVFSFY-----PD 68
SLH+ Q + Y +I+ +G L+ +D D +I GFG + H F F +
Sbjct: 308 SLHYNTPTQPSQYASSIAAVGNVLAPYDYDQMIEVVGFGGLYNGHTSHCFPFNLTNGDDN 367
Query: 69 EKFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAI---TIVEHSGGQYHVLVIIADGQ 125
+ +G +EVL Y V + + PT+F +I AI + S +Y VL+II DG
Sbjct: 368 KSEAHGLQEVLDIYYNNVLKIPFSYPTNFENVIHHAIKRASKSTQSNQKYTVLLIITDGD 427
Query: 126 VTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDN-------- 177
+ S +KT++ +V AS+ LS++++GVG+ ++ M+ D +
Sbjct: 428 I------------SDTQKTIDELVSASKSALSVVIIGVGNYHFEAMKILDGDEKGLVDSK 475
Query: 178 -IPARAFDNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQ 219
P++ D QFV F + ++ EA A L EIPSQ
Sbjct: 476 GNPSKR-DICQFVPFNDF------KNYPEA-LAHETLKEIPSQ 510
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
+CP+CL K+M F CGH TC CG + CPICR I+ RI LY
Sbjct: 986 MCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1030
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 275 VGTAPPASSTSDNHV--CPICLTDPKDMAFG-CGH-QTCCGCGQDLDLCPICRSFIQTRI 330
VG+ P+ ++++ + C +C +D FG CGH TC C + C IC+ +Q+R
Sbjct: 800 VGSRSPSLNSNNETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRT 859
Query: 331 KL 332
K+
Sbjct: 860 KI 861
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2 SV=1
Length = 1011
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
+CP+CL K+M F CGH TC CG + CPICR I+ RI LY
Sbjct: 963 MCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY 1007
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 275 VGTAPPASSTSDNHV---CPICLTDPKDMAFG-CGH-QTCCGCGQDLDLCPICRSFIQTR 329
VG+ P+ +D+ C +C +D FG CGH TC C + C +C+ +Q+R
Sbjct: 802 VGSHSPSMINNDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVKKCLLCKEQVQSR 861
Query: 330 IKL 332
K+
Sbjct: 862 TKI 864
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
+CP+CL K+M F CGH TC CG + CPICR I+ RI LY
Sbjct: 962 MCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 275 VGTAPPASSTSDNHV---CPICLTDPKDMAFG-CGH-QTCCGCGQDLDLCPICRSFIQTR 329
VG+ P+ ++D+ C +C +D FG CGH TC C + C IC+ +Q+R
Sbjct: 801 VGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSR 860
Query: 330 IKL 332
K+
Sbjct: 861 TKI 863
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
+CP+CL K+M F CGH TC CG + CPICR I+ RI LY
Sbjct: 962 MCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY 1006
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 275 VGTAPPASSTSDNHV---CPICLTDPKDMAFG-CGH-QTCCGCGQDLDLCPICRSFIQTR 329
VG+ P+ ++D+ C +C +D FG CGH TC C + C IC+ +Q+R
Sbjct: 801 VGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSR 860
Query: 330 IKL 332
K+
Sbjct: 861 TKI 863
>sp|Q09219|CPNA5_CAEEL Copine family protein 5 OS=Caenorhabditis elegans GN=cpna-5 PE=2
SV=2
Length = 717
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 21/196 (10%)
Query: 30 AISIIGKTLSSFDEDNLIPCFGFGDA---STHD-QEVFSFYPDEKFCNGFEEVLRRYREL 85
AI IG + + + L FG G + H+ E F + + C G + V+ YR+
Sbjct: 390 AIRAIGSIIRDYTPNRLFAAFGIGAKIPPTFHESNEFFLNFSMDPICRGLDGVMEAYRKT 449
Query: 86 VPHLRLAGPTSFAPIIEMAITIVEHSGG----QYHVLVIIADGQVTRSVDTEHGQLSSQE 141
+ + +P+I +T + H G YHVL + G+VT
Sbjct: 450 QTMVTPLKESKLSPVINY-VTRMSHRSGFRGLHYHVLALFTRGEVT------------DL 496
Query: 142 KKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNVDR 201
K+ +A+ AS+ PLSI+++G+GD + +++ D QF++ +++
Sbjct: 497 KEIQQALNSASDAPLSILIIGMGDFDFSSLQKLCSKRKDGRRDVVQFIHLKSLLNGAEAP 556
Query: 202 SRKEAEFALAALMEIP 217
++ A AL +P
Sbjct: 557 WLNKSRIAETALRHVP 572
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
+CP+C K+M F CGH TC CG ++ CPICR ++ RI L+
Sbjct: 1182 MCPVCFDRIKNMVFLCGHGTCQMCGDQIEGCPICRKTVEKRILLF 1226
>sp|Q1ZXB3|CPNF_DICDI Copine-F OS=Dictyostelium discoideum GN=cpnF PE=2 SV=1
Length = 550
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 44/236 (18%)
Query: 16 SLHH-IGDDQNPYEQAI-SIIGKTLSSF--DEDNLIPCFGFGDA-STHDQEVFSFY--PD 68
SLH+ + QN Y +++ ++ + L++F + + FGFG + H F F+ D
Sbjct: 315 SLHYNVKPHQNQYIRSLLALESQLLNNFGVKLEKRVEVFGFGAVINKHPNHNFRFHYIID 374
Query: 69 EK---FCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMA----ITIVEHSGGQYHVLVII 121
++ G V+ Y + +P ++ PT + IIE A + + +Y +L+I+
Sbjct: 375 DRPNTLKAGISGVIELYDKAIPKIQFTSPTKISSIIEDATRYSLQDFHSTQLKYSILLIL 434
Query: 122 ADGQVTRSVDTEHGQLSSQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFD--DNIP 179
D +T D E TV+ IV+AS+ PLSII +GVG+ + + + D N
Sbjct: 435 IDSDIT---DYE---------STVDEIVEASKAPLSIIFIGVGEYSFQNIPQLDGEKNGN 482
Query: 180 ARAF---------DNFQFVNFTEIMSKNVDRSRKEAEFALAALMEIPSQYKAALEF 226
R DN F++F E +D F L ++P+Q +EF
Sbjct: 483 IRLIGRFDRKQIRDNVHFISFKEFSINQID-------FQNEILRKLPNQLTEFMEF 531
>sp|Q5ZIJ9|MIB2_CHICK E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus GN=MIB2 PE=2 SV=1
Length = 954
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 290 CPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
CPIC+ D + F CGH +C C L +CPICR I+ RI+++
Sbjct: 910 CPICIDDQIKLVFQCGHGSCPDCSTALTVCPICRQAIRERIQIF 953
>sp|O55765|175R_IIV6 Putative RING finger protein 175R OS=Invertebrate iridescent virus
6 GN=IIV6-175R PE=4 SV=1
Length = 184
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 275 VGTAPPASSTS--DNHVCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTR 329
V T PP + +N +CP+CL + F C H +C C + L++CPICR+ I+ +
Sbjct: 120 VQTEPPIDDNNVPENILCPVCLIVKVNTVFNCTHVSCSSCAKRLNVCPICRNPIRKK 176
>sp|Q8R516|MIB2_MOUSE E3 ubiquitin-protein ligase MIB2 OS=Mus musculus GN=Mib2 PE=1 SV=2
Length = 973
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 290 CPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
CPIC+ + F CGH C CG L+ CPICR I+ RI+++
Sbjct: 929 CPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 972
>sp|Q68LP1|MIB2_RAT E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus GN=Mib2 PE=2
SV=2
Length = 971
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 290 CPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
CPIC+ + F CGH C CG L+ CPICR I+ RI+++
Sbjct: 927 CPICIDSHIRLVFQCGHGACAPCGAALNACPICRQPIRDRIQIF 970
>sp|Q96AX9|MIB2_HUMAN E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens GN=MIB2 PE=1 SV=3
Length = 1013
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 289 VCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQTRIKLY 333
CPIC+ + F CGH C CG L CPICR I+ RI+++
Sbjct: 968 TCPICIDSHIRLVFQCGHGACAPCGSALSACPICRQPIRDRIQIF 1012
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 273 RVVGTAPPASSTSDNHVCPICLTDPKDMAF-GCGHQTCCG-CGQDLDLCPICRSFIQTRI 330
R+V D + C IC ++P ++ C H + C C L CPICRS I+ +I
Sbjct: 880 RLVSLEKEKDQLKDQNSCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKI 939
Query: 331 KLY 333
+Y
Sbjct: 940 SIY 942
>sp|O55735|121R_IIV6 Putative RING finger protein 121R OS=Invertebrate iridescent virus
6 GN=IIV6-121R PE=4 SV=1
Length = 89
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 279 PPAS--STSDNHVCPICLTDPKDMAFGCGHQTCCGCGQDLDLCPICRSFIQT 328
PP + N +CPICL + C H C C + +++CPICR Q+
Sbjct: 32 PPIEIENVKKNVLCPICLIAKVNTVLECTHVLCSNCVKKINVCPICRKTFQS 83
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 269 SGHERVVGTAPPASSTSDNHVCPICLTDPKD-MAFGCGHQ-TCCGCGQDLDLCPICRSFI 326
SG+E G A P S + ++C IC+ P D + CGH TC CG+ ++ CPICR ++
Sbjct: 311 SGNEDQNGGAVP--SGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYV 368
Query: 327 QTRIKLY 333
+ ++
Sbjct: 369 IRAVHVF 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,403,062
Number of Sequences: 539616
Number of extensions: 5334937
Number of successful extensions: 15523
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 15329
Number of HSP's gapped (non-prelim): 210
length of query: 333
length of database: 191,569,459
effective HSP length: 118
effective length of query: 215
effective length of database: 127,894,771
effective search space: 27497375765
effective search space used: 27497375765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)