Query 019940
Match_columns 333
No_of_seqs 275 out of 1603
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 09:23:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 3.1E-31 1.1E-35 252.3 14.4 167 80-321 7-175 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 9.1E-29 3.1E-33 238.1 11.8 166 82-321 25-192 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 4.6E-28 1.6E-32 233.0 14.0 165 82-321 30-197 (332)
4 2an1_A Putative kinase; struct 99.0 2E-09 6.9E-14 101.0 11.3 124 82-232 6-133 (292)
5 1yt5_A Inorganic polyphosphate 98.9 8.5E-10 2.9E-14 102.4 5.8 108 83-231 2-109 (258)
6 2i2c_A Probable inorganic poly 98.8 2.2E-08 7.7E-13 93.4 10.9 104 83-231 2-106 (272)
7 1u0t_A Inorganic polyphosphate 98.7 3.7E-08 1.3E-12 93.5 9.8 128 82-229 5-142 (307)
8 3afo_A NADH kinase POS5; alpha 98.1 1.3E-05 4.4E-10 78.7 10.9 157 52-230 11-183 (388)
9 1z0s_A Probable inorganic poly 95.8 0.019 6.4E-07 53.8 7.3 55 148-217 68-122 (278)
10 3pfn_A NAD kinase; structural 93.7 0.12 4.3E-06 50.0 7.2 134 76-227 33-173 (365)
11 3hl0_A Maleylacetate reductase 88.7 1.5 5.1E-05 41.8 8.9 107 60-184 8-119 (353)
12 3jzd_A Iron-containing alcohol 86.4 2.2 7.7E-05 40.7 8.6 86 81-184 36-121 (358)
13 3uhj_A Probable glycerol dehyd 82.8 2 6.9E-05 41.5 6.5 110 56-185 24-139 (387)
14 3okf_A 3-dehydroquinate syntha 78.9 5.1 0.00018 38.9 7.9 93 80-184 61-157 (390)
15 1o2d_A Alcohol dehydrogenase, 78.9 20 0.00068 34.0 12.0 95 82-190 41-156 (371)
16 2gru_A 2-deoxy-scyllo-inosose 78.7 4.4 0.00015 38.6 7.3 92 81-184 34-128 (368)
17 3iv7_A Alcohol dehydrogenase I 77.2 5.1 0.00018 38.3 7.3 84 81-184 37-120 (364)
18 3ox4_A Alcohol dehydrogenase 2 74.7 9.7 0.00033 36.4 8.5 116 59-189 5-145 (383)
19 1jq5_A Glycerol dehydrogenase; 73.4 8.2 0.00028 36.5 7.6 106 58-184 5-118 (370)
20 3qbe_A 3-dehydroquinate syntha 73.3 6.1 0.00021 38.0 6.6 90 82-184 44-137 (368)
21 1ta9_A Glycerol dehydrogenase; 68.6 11 0.00036 37.2 7.4 112 53-184 59-177 (450)
22 1oj7_A Hypothetical oxidoreduc 68.1 22 0.00076 34.1 9.4 120 60-191 27-168 (408)
23 1pfk_A Phosphofructokinase; tr 66.7 13 0.00046 35.0 7.3 38 149-191 95-132 (320)
24 1ujn_A Dehydroquinate synthase 66.1 11 0.00039 35.5 6.8 90 81-184 28-118 (348)
25 3clh_A 3-dehydroquinate syntha 65.5 4.8 0.00017 38.0 4.0 92 81-184 26-119 (343)
26 1sg6_A Pentafunctional AROM po 64.7 4.4 0.00015 39.0 3.6 40 150-191 107-148 (393)
27 1zxx_A 6-phosphofructokinase; 59.2 14 0.00049 34.8 6.0 38 149-191 94-131 (319)
28 3bfj_A 1,3-propanediol oxidore 58.2 53 0.0018 31.0 10.0 119 59-190 7-150 (387)
29 4grd_A N5-CAIR mutase, phospho 58.1 91 0.0031 26.8 10.7 86 83-186 14-100 (173)
30 3rf7_A Iron-containing alcohol 56.3 31 0.0011 33.0 7.9 113 56-184 21-159 (375)
31 1xah_A Sadhqs, 3-dehydroquinat 55.6 9.5 0.00032 36.0 4.1 90 82-184 32-124 (354)
32 1sfu_A 34L protein; protein/Z- 54.7 7.1 0.00024 29.2 2.4 32 186-224 31-63 (75)
33 3ce9_A Glycerol dehydrogenase; 52.2 15 0.00051 34.5 4.9 109 59-187 8-123 (354)
34 4a3s_A 6-phosphofructokinase; 50.7 25 0.00085 33.0 6.1 38 149-191 94-131 (319)
35 2hig_A 6-phospho-1-fructokinas 50.2 23 0.00078 35.4 6.0 41 149-191 190-233 (487)
36 4hf7_A Putative acylhydrolase; 50.1 8.4 0.00029 32.7 2.6 61 154-218 57-117 (209)
37 1vlj_A NADH-dependent butanol 46.3 82 0.0028 30.0 9.3 119 60-190 18-159 (407)
38 3ors_A N5-carboxyaminoimidazol 45.4 1E+02 0.0036 26.2 8.6 32 150-187 61-92 (163)
39 1o4v_A Phosphoribosylaminoimid 44.9 1.5E+02 0.0052 25.6 9.8 89 82-187 13-102 (183)
40 1u11_A PURE (N5-carboxyaminoim 43.6 1.4E+02 0.0048 25.9 9.2 87 83-187 23-110 (182)
41 1rrm_A Lactaldehyde reductase; 43.5 50 0.0017 31.2 7.2 118 59-189 5-147 (386)
42 1xmp_A PURE, phosphoribosylami 43.3 1.1E+02 0.0036 26.3 8.4 81 93-187 19-100 (170)
43 3lp6_A Phosphoribosylaminoimid 42.4 1.2E+02 0.0043 26.0 8.7 32 150-187 65-96 (174)
44 3oow_A Phosphoribosylaminoimid 41.5 1.3E+02 0.0043 25.7 8.5 81 93-187 13-94 (166)
45 2f48_A Diphosphate--fructose-6 37.8 32 0.0011 34.9 4.9 41 150-191 168-210 (555)
46 3hbm_A UDP-sugar hydrolase; PS 34.2 84 0.0029 28.6 6.8 35 141-184 218-252 (282)
47 3kuu_A Phosphoribosylaminoimid 34.0 1.7E+02 0.0058 25.1 8.2 84 83-183 14-98 (174)
48 3gw6_A Endo-N-acetylneuraminid 33.3 13 0.00046 34.3 1.1 13 150-162 47-59 (275)
49 4b4k_A N5-carboxyaminoimidazol 32.7 1.8E+02 0.0061 25.2 8.1 74 84-169 25-99 (181)
50 2x9a_A Attachment protein G3P; 32.0 11 0.00039 27.2 0.4 11 151-161 40-50 (65)
51 3hno_A Pyrophosphate-dependent 30.5 69 0.0023 31.2 5.8 41 150-191 106-148 (419)
52 2ywx_A Phosphoribosylaminoimid 30.3 1.5E+02 0.005 25.1 7.1 21 149-169 53-73 (157)
53 3o8l_A 6-phosphofructokinase, 29.8 58 0.002 34.3 5.4 41 150-191 491-534 (762)
54 3opy_A 6-phosphofructo-1-kinas 28.6 1.2E+02 0.0042 32.9 7.7 42 149-191 689-733 (989)
55 3dc7_A Putative uncharacterize 28.4 33 0.0011 29.0 2.9 64 152-218 57-126 (232)
56 3trh_A Phosphoribosylaminoimid 26.2 3E+02 0.01 23.4 9.8 30 150-185 64-93 (169)
57 3opy_B 6-phosphofructo-1-kinas 24.8 1.1E+02 0.0039 32.9 6.6 42 149-191 663-707 (941)
58 3o8o_B 6-phosphofructokinase s 23.7 1.4E+02 0.0048 31.4 7.0 44 149-192 99-160 (766)
59 3rg8_A Phosphoribosylaminoimid 22.9 2.8E+02 0.0096 23.3 7.5 21 150-170 61-81 (159)
60 2h31_A Multifunctional protein 21.9 2.8E+02 0.0096 27.0 8.3 21 150-170 324-344 (425)
61 3o8o_A 6-phosphofructokinase s 21.6 1.6E+02 0.0054 31.2 6.9 42 149-191 484-528 (787)
62 3o8l_A 6-phosphofructokinase, 20.8 1.8E+02 0.006 30.7 7.0 43 149-191 110-170 (762)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=99.97 E-value=3.1e-31 Score=252.27 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=119.6
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEee-ccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 019940 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (333)
Q Consensus 80 ~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~-~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GG 157 (333)
+-++++||+||+||++++.+.|+.+++.|....+ +++. ++.++++.+ +.+.+ ..+.+.||++||
T Consensus 7 ~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~-------------~~~~d~vv~~GG 72 (304)
T 3s40_A 7 KFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEF-------------ASKVDLIIVFGG 72 (304)
T ss_dssp SCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHH-------------TTTCSEEEEEEC
T ss_pred CCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHh-------------hcCCCEEEEEcc
Confidence 3478999999999999999999999998876432 3332 245666543 32221 123578999999
Q ss_pred chHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeeeecCCCC
Q 019940 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (333)
Q Consensus 158 DGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~~~~~~~ 237 (333)
|||||||++++... +.++|||+||+||||||||+||||. +++++++.|.+++.+++|+|+++-
T Consensus 73 DGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~~------- 135 (304)
T 3s40_A 73 DGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKANG------- 135 (304)
T ss_dssp HHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEETT-------
T ss_pred chHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEECC-------
Confidence 99999999999763 3579999999999999999999997 688999999999999999998840
Q ss_pred CCCCCCCCCCCCcccccccccccccccCccCcceeccceeeeccccccHHHHHHHHhhhhcCcccccccccchHHHHHHH
Q 019940 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (333)
Q Consensus 238 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~r~F~NyfsiG~DA~V~~~f~~~R~~~p~~f~~rl~nkl~Y~~~g 317 (333)
++|+|++|+||||+|++.+++.++ +..|++.|++.+
T Consensus 136 ------------------------------------~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~ 171 (304)
T 3s40_A 136 ------------------------------------QHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLST 171 (304)
T ss_dssp ------------------------------------EEESSEEEEC--------------------------CHHHHTTT
T ss_pred ------------------------------------EEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHHH
Confidence 479999999999999999876443 457899999999
Q ss_pred Hhhh
Q 019940 318 GTQG 321 (333)
Q Consensus 318 ~~~~ 321 (333)
++..
T Consensus 172 l~~l 175 (304)
T 3s40_A 172 IRTV 175 (304)
T ss_dssp C---
T ss_pred HHHH
Confidence 8763
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.95 E-value=9.1e-29 Score=238.08 Aligned_cols=166 Identities=20% Similarity=0.166 Sum_probs=123.1
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeec-cChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~-~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDG 159 (333)
++++||+||.||++++.+.++.+++.|....+ +.+.. +.++++.+ +.+.+ . ....+.|||+||||
T Consensus 25 ~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~-~~~~~---~---------~~~~d~vvv~GGDG 91 (337)
T 2qv7_A 25 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATL-EAERA---M---------HENYDVLIAAGGDG 91 (337)
T ss_dssp EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHH-HHHHH---T---------TTTCSEEEEEECHH
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHH---h---------hcCCCEEEEEcCch
Confidence 56999999999999999999999999976543 33332 34455432 22211 0 12357899999999
Q ss_pred HHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeeeecCCCCCC
Q 019940 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (333)
Q Consensus 160 TvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~~~~~~~g~ 239 (333)
||+||++++.+. ..++|||+||+||+|||||+||++. ++.++++.|.+++.+++|+|+++-
T Consensus 92 Tv~~v~~~l~~~--~~~~pl~iIP~GT~N~lAr~Lg~~~--------~~~~al~~i~~g~~~~iD~g~v~~--------- 152 (337)
T 2qv7_A 92 TLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMNN--------- 152 (337)
T ss_dssp HHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEETT---------
T ss_pred HHHHHHHHHHhC--CCCCcEEEecCCcHhHHHHHcCCCC--------CHHHHHHHHHcCCcEEEEEEEECC---------
Confidence 999999999642 3679999999999999999999997 688899999999999999998740
Q ss_pred CCCCCCCCCCcccccccccccccccCccCcceeccceeeeccccccHHHHHHHHhhhhcCcccccccccchHHHHHHHHh
Q 019940 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 319 (333)
Q Consensus 240 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~r~F~NyfsiG~DA~V~~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~~ 319 (333)
|+|+|++|+|+||+|++.++..++ +..|++.|++.+++
T Consensus 153 ----------------------------------r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l~ 190 (337)
T 2qv7_A 153 ----------------------------------RYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFE 190 (337)
T ss_dssp ----------------------------------EEESSEEEEECBCC---------------------CGGGSCCCTTT
T ss_pred ----------------------------------EEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHHH
Confidence 479999999999999998876543 45688999988887
Q ss_pred hh
Q 019940 320 QG 321 (333)
Q Consensus 320 ~~ 321 (333)
..
T Consensus 191 ~l 192 (337)
T 2qv7_A 191 ML 192 (337)
T ss_dssp TG
T ss_pred HH
Confidence 64
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.95 E-value=4.6e-28 Score=233.04 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=120.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeec-cChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~-~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDG 159 (333)
++++||+||.||++ +.++.+.+.|....+ +.+.. +.++++.+ +.+.+. ....+.|||+||||
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~vvv~GGDG 93 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEAR------------KFGVATVIAGGGDG 93 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHH------------HHTCSEEEEEESHH
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH-HHHHHH------------hcCCCEEEEEccch
Confidence 67999999999977 567788888865432 33332 34555432 222210 12357899999999
Q ss_pred HHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeeeecCCCCCC
Q 019940 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (333)
Q Consensus 160 TvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~~~~~~~g~ 239 (333)
||+||++++.+.....++|||+||+||+|||||+|||+. ++.++++.|.+++.+++|+|.++-
T Consensus 94 Tl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~--------~~~~al~~i~~g~~~~iDlg~v~~--------- 156 (332)
T 2bon_A 94 TINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPE--------ALDKALKLAIAGDAIAIDMAQVNK--------- 156 (332)
T ss_dssp HHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCS--------SHHHHHHHHHHSEEEEEEEEEETT---------
T ss_pred HHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC---------
Confidence 999999999853223578999999999999999999987 688899999999999999998841
Q ss_pred CCCCCCCCCCcccccccccccccccCccCcceecc-ceeeeccccccHHHHHHHHhhhhcCcccccccccchHHHHHHHH
Q 019940 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRG-GFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (333)
Q Consensus 240 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~r-~F~NyfsiG~DA~V~~~f~~~R~~~p~~f~~rl~nkl~Y~~~g~ 318 (333)
+ +|+|++|+|+||+|++.++..++ +..|++.|++.++
T Consensus 157 ----------------------------------r~~fl~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 194 (332)
T 2bon_A 157 ----------------------------------QTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHGL 194 (332)
T ss_dssp ----------------------------------SCEESSEEEEEEEEEC------------------CCHHHHHHHHHT
T ss_pred ----------------------------------ceEEEEEEeECccHHHHHHhhHHhH--------hcccHHHHHHHHH
Confidence 2 79999999999999988765433 4568999999998
Q ss_pred hhh
Q 019940 319 TQG 321 (333)
Q Consensus 319 ~~~ 321 (333)
+..
T Consensus 195 ~~l 197 (332)
T 2bon_A 195 MRM 197 (332)
T ss_dssp SCE
T ss_pred HHH
Confidence 753
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=98.99 E-value=2e-09 Score=100.96 Aligned_cols=124 Identities=9% Similarity=0.017 Sum_probs=74.8
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhcc-chhhh--hhccCcEEEEEcC
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAG-DVFAS--EIEKRLRLIVAGG 157 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g-~~la~--~~~~~~~IVv~GG 157 (333)
+++.||+||.++ ...+.+..+.+.|.+..+ +.+..+.... + ...+ ..++. ...+.+.||++||
T Consensus 6 kki~ii~np~~~--~~~~~~~~i~~~l~~~g~~v~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 6 KCIGIVGHPRHP--TALTTHEMLYRWLCDQGYEVIVEQQIAHE----L-------QLKNVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CEEEEECC---------CHHHHHHHHHHHTTCEEEEEHHHHHH----T-------TCSSCCEECHHHHHHHCSEEEECSC
T ss_pred cEEEEEEcCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhhh----c-------ccccccccchhhcccCCCEEEEEcC
Confidence 579999999864 445677888887766443 2222110000 0 0000 00000 0123578999999
Q ss_pred chHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeeee
Q 019940 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRM 232 (333)
Q Consensus 158 DGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~~ 232 (333)
|||++++++.+.+. ..|.||| |+||.|+|++ ++ +. +++++++.|.+++.+--+...+++..
T Consensus 73 DGT~l~a~~~~~~~---~~P~lGI-~~Gt~gfla~-~~-~~--------~~~~al~~i~~g~~~~~~r~~l~~~~ 133 (292)
T 2an1_A 73 DGNMLGAARTLARY---DINVIGI-NRGNLGFLTD-LD-PD--------NALQQLSDVLEGRYISEKRFLLEAQV 133 (292)
T ss_dssp HHHHHHHHHHHTTS---SCEEEEB-CSSSCCSSCC-BC-TT--------SHHHHHHHHHTTCEEEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC---CCCEEEE-ECCCcccCCc-CC-HH--------HHHHHHHHHHcCCCEEEEeEEEEEEE
Confidence 99999999999763 2344777 8999888886 45 54 68999999999987655666665543
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.92 E-value=8.5e-10 Score=102.37 Aligned_cols=108 Identities=21% Similarity=0.266 Sum_probs=75.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 019940 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (333)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvn 162 (333)
++.||+||.||.+ +.++++.+.+.|.. +++.. . + + . .....+.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~~---~~~~~-~--~--~----~-------------~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHEV---IEFGE-A--N--A----P-------------GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSEE---EEEEE-S--S--S----C-------------SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhcC---Cceec-c--c--c----c-------------ccCCCCEEEEEeCcHHHH
Confidence 5899999999987 77788888777662 22221 1 1 0 0 012457899999999999
Q ss_pred HHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeee
Q 019940 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 231 (333)
Q Consensus 163 eVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~ 231 (333)
++++.+.. ..|.+|| ++||.+.|+ .+. +. ++.++++.+.+++.+--++..++..
T Consensus 56 ~~a~~~~~----~~PilGI-n~G~~Gfl~-~~~-~~--------~~~~al~~i~~g~~~i~~r~~l~~~ 109 (258)
T 1yt5_A 56 KAAKKAAD----GTPMVGF-KAGRLGFLT-SYT-LD--------EIDRFLEDLRNWNFREETRWFIQIE 109 (258)
T ss_dssp HHHTTBCT----TCEEEEE-ESSSCCSSC-CBC-GG--------GHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred HHHHHhCC----CCCEEEE-ECCCCCccC-cCC-HH--------HHHHHHHHHHcCCceEEEEEEEEEE
Confidence 99988753 2344777 599995555 565 44 7999999999998764455555443
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.80 E-value=2.2e-08 Score=93.43 Aligned_cols=104 Identities=10% Similarity=0.049 Sum_probs=73.9
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 019940 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (333)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvn 162 (333)
++.||+||. .++.+.++.+.+.|....+- +.. ...+.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~~-v~~----------------------------~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDME-YDD----------------------------VEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSCE-ECS----------------------------SSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCCE-eCC----------------------------CCCCEEEEEcCcHHHH
Confidence 588999963 35567778888878764431 110 1347899999999999
Q ss_pred HHHHHHhhCCCCCCCC-EEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEeee
Q 019940 163 WLLGVVSDLKLPHSPP-VATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMR 231 (333)
Q Consensus 163 eVln~l~~~~~~~~~p-lgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~~ 231 (333)
++++.+... ...+| +|| |+|| ++|+..+. +. +++++++.+.+++.+.-++..++..
T Consensus 50 ~aa~~~~~~--~~~~PilGI-n~G~-lgfl~~~~-~~--------~~~~~l~~l~~g~~~i~~r~~L~~~ 106 (272)
T 2i2c_A 50 SAFHQYEER--LDEIAFIGI-HTGH-LGFYADWR-PA--------EADKLVKLLAKGEYQKVSYPLLKTT 106 (272)
T ss_dssp HHHHHTGGG--TTTCEEEEE-ESSS-CCSSCCBC-GG--------GHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred HHHHHHhhc--CCCCCEEEE-eCCC-CCcCCcCC-HH--------HHHHHHHHHHcCCCEEEEEEEEEEE
Confidence 999998651 02466 776 9999 66888875 44 7899999999997765555555443
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.72 E-value=3.7e-08 Score=93.47 Aligned_cols=128 Identities=17% Similarity=0.145 Sum_probs=75.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHH--HHHHH-------HHHHhhhccchhhhhhccCcE
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVL--HQLYV-------TLEKFKAAGDVFASEIEKRLR 151 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~--~~~~~-------~l~~l~~~g~~la~~~~~~~~ 151 (333)
++++||+||.++ ...+.+..+.+.|....+ +.+......... ..... .++.+.. +. ....+.+.
T Consensus 5 ~ki~iI~n~~~~--~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~--~~~~~~d~ 78 (307)
T 1u0t_A 5 RSVLLVVHTGRD--EATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDA--DQ--HAADGCEL 78 (307)
T ss_dssp CEEEEEESSSGG--GGSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CCC
T ss_pred CEEEEEEeCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccc--cc--ccccCCCE
Confidence 679999999986 445678888888876443 222221111100 00000 0000000 00 00123578
Q ss_pred EEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEe
Q 019940 152 LIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (333)
Q Consensus 152 IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~ 229 (333)
||++|||||++++++.+... ..|.+|| ++||.|.|+. +. +. +++++++.+.+++...-++..++
T Consensus 79 vi~~GGDGT~l~a~~~~~~~---~~pvlgi-~~G~~gfl~~-~~-~~--------~~~~~~~~i~~g~~~~~~r~~l~ 142 (307)
T 1u0t_A 79 VLVLGGDGTFLRAAELARNA---SIPVLGV-NLGRIGFLAE-AE-AE--------AIDAVLEHVVAQDYRVEDRLTLD 142 (307)
T ss_dssp EEEEECHHHHHHHHHHHHHH---TCCEEEE-ECSSCCSSCS-EE-GG--------GHHHHHHHHHHTCCEEEEECCEE
T ss_pred EEEEeCCHHHHHHHHHhccC---CCCEEEE-eCCCCccCcc-cC-HH--------HHHHHHHHHHcCCcEEEEEEEEE
Confidence 99999999999999999763 2234775 8999998885 43 43 78999999999887655544443
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=98.10 E-value=1.3e-05 Score=78.71 Aligned_cols=157 Identities=15% Similarity=0.176 Sum_probs=87.4
Q ss_pred ccccccccccccCeeeecCCccc-cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccC--cE-EEeeccChhhHHHH
Q 019940 52 PKSKILNNYYIPNYILVSGSEVQ-RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLHQ 127 (333)
Q Consensus 52 ~~~~~~~~~~ip~~~~~~~~~~~-~~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~--~v-~~l~~~~p~~~~~~ 127 (333)
..+..|+.-..|.|+-.|.+... ..-..+.++++||+||.. ....+.+..+.+.|... .+ +.+.. ...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~-~~a~~--- 84 (388)
T 3afo_A 11 KPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP-DVAEE--- 84 (388)
T ss_dssp EEGGGSCCCCCCEEEC----CCEEEECSSCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH-HHHHH---
T ss_pred eeHhhcCcccCcceEeCcchhheeeEccCCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC-chhhh---
Confidence 44666777777888888776422 222345688999999874 45556677777777543 33 21221 11111
Q ss_pred HHHHHHHhhh--------c----cchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcC
Q 019940 128 LYVTLEKFKA--------A----GDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFG 195 (333)
Q Consensus 128 ~~~~l~~l~~--------~----g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG 195 (333)
+.. .+.. . ...........+.||++|||||+..++..+.... ..|.||| ++||.+-|+ .+.
T Consensus 85 l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~--vpPiLGI-N~G~lGFLt-~~~ 157 (388)
T 3afo_A 85 ISQ---DFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQ--VPPVLAF-ALGTLGFLS-PFD 157 (388)
T ss_dssp HHT---TCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTSC--CCCEEEE-ECSSCCSSC-CEE
T ss_pred hhh---hccccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhcccC--CCeEEEE-ECCCcccCC-cCC
Confidence 100 0000 0 0000000124578999999999999998875421 1133665 999985444 344
Q ss_pred CCCCCCCCchHHHHHHHHHHHcCCeEeEEEEEEee
Q 019940 196 WGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (333)
Q Consensus 196 ~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~V~~ 230 (333)
. ++++++++.+.+++.....+-.+..
T Consensus 158 ~---------~~~~~al~~il~g~~~~~~r~~L~~ 183 (388)
T 3afo_A 158 F---------KEHKKVFQEVISSRAKCLHRTRLEC 183 (388)
T ss_dssp G---------GGHHHHHHHHHTTCCEEEEECCEEE
T ss_pred h---------HHHHHHHHHHhcCCceEEEeeEEEE
Confidence 2 2788999999998765444444433
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.77 E-value=0.019 Score=53.78 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=35.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 019940 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (333)
Q Consensus 148 ~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~ 217 (333)
..+.||++|||||+-.++..+.. . +|+-=|..||-+=|+. + .. ++++++++.+.+
T Consensus 68 ~~DlvIvlGGDGT~L~aa~~~~~----~-~PilGIN~G~lGFLt~-~--~~-------~~~~~~l~~l~~ 122 (278)
T 1z0s_A 68 NFDFIVSVGGDGTILRILQKLKR----C-PPIFGINTGRVGLLTH-A--SP-------ENFEVELKKAVE 122 (278)
T ss_dssp GSSEEEEEECHHHHHHHHTTCSS----C-CCEEEEECSSSCTTCC-B--BT-------TBCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHhCC----C-CcEEEECCCCCccccc-c--CH-------HHHHHHHHHHHh
Confidence 35789999999999777655432 3 7766678886444432 2 11 246666666654
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=93.68 E-value=0.12 Score=49.98 Aligned_cols=134 Identities=18% Similarity=0.157 Sum_probs=67.7
Q ss_pred ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHH-----HH-HHhhhccchhhhhhcc
Q 019940 76 SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYV-----TL-EKFKAAGDVFASEIEK 148 (333)
Q Consensus 76 ~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~-----~l-~~l~~~g~~la~~~~~ 148 (333)
.-..+.+.++||--|.. .........+.+.|....+ +.+...- .+.+. +.. .. ..+......+......
T Consensus 33 ~w~~~~k~I~iv~K~~~--~~~~~~~~~l~~~L~~~~~~V~ve~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (365)
T 3pfn_A 33 TWNKSPKSVLVIKKMRD--ASLLQPFKELCTHLMEENMIVYVEKKV-LEDPA-IASDESFGAVKKKFCTFREDYDDISNQ 108 (365)
T ss_dssp EESSCCCEEEEEECTTC--GGGHHHHHHHHHHHHHTSCEEEEEHHH-HHSHH-HHHCSTTHHHHHHCEEECTTTCCCTTT
T ss_pred ccCCCCCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEehHH-hhhhc-cccccccccccccccccccChhhcccC
Confidence 34556788888877654 3444566666666655443 2232211 01000 000 00 0000000000000124
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEeEEEEE
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~~~~~iD~~~ 227 (333)
.+.||++|||||+-.++..+.. ..+|+-=|-+| .||.=.. .+.++++++++.+.+++..--.+-.
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~----~~~PvlGiN~G-------~LGFLt~---~~~~~~~~~l~~vl~g~~~v~~R~~ 173 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQG----SVPPVMAFHLG-------SLGFLTP---FSFENFQSQVTQVIEGNAAVVLRSR 173 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSS----SCCCEEEEESS-------SCTTTCC---EESTTHHHHHHHHHHSCCBEEEECC
T ss_pred CCEEEEEcChHHHHHHHHHhcc----CCCCEEEEcCC-------CCcccee---ecHHHHHHHHHHHHcCCCeEEEEee
Confidence 5789999999999888876643 35664444444 3443221 1123688899999988764433333
No 11
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=88.69 E-value=1.5 Score=41.82 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=58.1
Q ss_pred cc-ccCeeeecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHH
Q 019940 60 YY-IPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 134 (333)
Q Consensus 60 ~~-ip~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~ 134 (333)
|. .|..++.-... ..+ ......++++||..+.. ..+.+++.+.|.+..+.......+..-.+.+.+.++.
T Consensus 8 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~ 82 (353)
T 3hl0_A 8 YMAAPARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEA 82 (353)
T ss_dssp CCCCCCCEEECTTGGGGHHHHHHHTTCCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHH
T ss_pred eecCCceEEECcCHHHHHHHHHHHhCCCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHH
Confidence 44 67776664421 111 11223367888877642 2356777777776443222221121112223233322
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 135 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 135 l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
+. ..+.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 83 ~~---------~~~~D~IIavGG-Gs~iD~aK~iA~~---~~~p~i~IPT 119 (353)
T 3hl0_A 83 YR---------AAGADCVVSLGG-GSTTGLGKAIALR---TDAAQIVIPT 119 (353)
T ss_dssp HH---------HTTCSEEEEEES-HHHHHHHHHHHHH---HCCEEEEEEC
T ss_pred Hh---------ccCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 21 124578999999 9999988877542 4688999996
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=86.37 E-value=2.2 Score=40.70 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=49.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 019940 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (333)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGT 160 (333)
.++++||..+.. ..+.+++.+.|....+..+....+..-.+.+.+.++.+. ..+.+.||++|| |+
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~---------~~~~D~IIavGG-Gs 100 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARAR---------EAGADCAVAVGG-GS 100 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHH---------HHTCSEEEEEES-HH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCCCHHHHHHHHHHhh---------ccCCCEEEEeCC-cH
Confidence 367888877642 235677777776644322222222111222222322211 124578999999 99
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 161 vneVln~l~~~~~~~~~plgiIP~ 184 (333)
+..+...+... ..+|+..||.
T Consensus 101 viD~aK~iA~~---~~~p~i~IPT 121 (358)
T 3jzd_A 101 TTGLGKAIALE---TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEeC
Confidence 99988877542 4688888986
No 13
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=82.81 E-value=2 Score=41.51 Aligned_cols=110 Identities=13% Similarity=-0.000 Sum_probs=58.4
Q ss_pred ccccccccCeeeecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhcc-Cc-EEEeeccChhhHHHHHH
Q 019940 56 ILNNYYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE-NQ-VIDLGEKAPDKVLHQLY 129 (333)
Q Consensus 56 ~~~~~~ip~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~-~~-v~~l~~~~p~~~~~~~~ 129 (333)
+.+.|..|..++.-... ..+ ..... ++++||..+..- ..+.+.+.+.|.+ .. +|+.....|.. +.+.
T Consensus 24 m~~~f~~p~~i~~G~g~l~~l~~~l~~~g-~r~liVtd~~~~----~~~~~~v~~~L~~g~~~~~~~~~~~p~~--~~v~ 96 (387)
T 3uhj_A 24 MARAFGGPNKYIQRAGEIDKLAAYLAPLG-KRALVLIDRVLF----DALSERIGKSCGDSLDIRFERFGGECCT--SEIE 96 (387)
T ss_dssp CEEEEECCSEEEECTTTTTTTHHHHGGGC-SEEEEEECTTTH----HHHHHHC------CCEEEEEECCSSCSH--HHHH
T ss_pred hhhHhcCCCeEEEcCCHHHHHHHHHHHcC-CEEEEEECchHH----HHHHHHHHHHHHcCCCeEEEEcCCCCCH--HHHH
Confidence 35778889887765432 111 11112 788898886553 2356677777765 12 23222222221 2222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCC
Q 019940 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (333)
Q Consensus 130 ~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~G 185 (333)
+.++.+. + .+.+.||++|| |++..+...+.-. ..+|+..||.=
T Consensus 97 ~~~~~~~--------~-~~~d~IIavGG-Gs~~D~AK~iA~~---~~~p~i~IPTT 139 (387)
T 3uhj_A 97 RVRKVAI--------E-HGSDILVGVGG-GKTADTAKIVAID---TGARIVIAPTI 139 (387)
T ss_dssp HHHHHHH--------H-HTCSEEEEESS-HHHHHHHHHHHHH---TTCEEEECCSS
T ss_pred HHHHHHh--------h-cCCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEecCc
Confidence 3322221 1 23578999998 9999988877642 46889999973
No 14
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=78.91 E-value=5.1 Score=38.86 Aligned_cols=93 Identities=16% Similarity=0.214 Sum_probs=51.3
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 019940 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (333)
Q Consensus 80 ~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v--~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~ 155 (333)
..++++||.++... ..+.+.+.+.|.... + +.+....+..-++.+.+.++.+.+.+ ....+.||++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~------~~R~d~IIAv 130 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHN------YSRDVVVIAL 130 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTT------CCTTCEEEEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcC------CCcCcEEEEE
Confidence 45789999987654 236677777775432 2 22222112111222333333222111 1223578888
Q ss_pred cCchHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 156 GGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 156 GGDGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
|| |++..+...+... ....+|+..||.
T Consensus 131 GG-Gsv~D~ak~~Aa~-~~rgip~I~IPT 157 (390)
T 3okf_A 131 GG-GVIGDLVGFAAAC-YQRGVDFIQIPT 157 (390)
T ss_dssp ES-HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred CC-cHHhhHHHHHHHH-hcCCCCEEEeCC
Confidence 88 8888888776421 125788999997
No 15
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=78.87 E-value=20 Score=33.99 Aligned_cols=95 Identities=24% Similarity=0.365 Sum_probs=50.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccC--c--EEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--Q--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~--~--v~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GG 157 (333)
++++||..+.+-... .+++.+.+.|... . +|+-....|. .+.+.+.++.+. + .+.+.||++||
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p~--~~~v~~~~~~~~--------~-~~~d~IIavGG 107 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENPS--FDNVMKAVERYR--------N-DSFDFVVGLGG 107 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSCB--HHHHHHHHHHHT--------T-SCCSEEEEEES
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCCC--HHHHHHHHHHHH--------h-cCCCEEEEeCC
Confidence 789999987543222 2455666666432 2 2321222222 222333332221 1 24577888888
Q ss_pred chHHHHHHHHHhhCCCC---------------CCCCEEEEeC--CCCcch
Q 019940 158 DGTASWLLGVVSDLKLP---------------HSPPVATVPL--GTGNNI 190 (333)
Q Consensus 158 DGTvneVln~l~~~~~~---------------~~~plgiIP~--GTGNDf 190 (333)
|++..+...+.-.-.. ..+|+..||. |||-..
T Consensus 108 -Gsv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~ 156 (371)
T 1o2d_A 108 -GSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEV 156 (371)
T ss_dssp -HHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGG
T ss_pred -hHHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhh
Confidence 7888887766432111 5789999995 455443
No 16
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=78.69 E-value=4.4 Score=38.62 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhccC-cE--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 019940 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (333)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~-~v--~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GG 157 (333)
.++++||.++.... ...+.+.+.|... .+ +.+....+..-++.+.+.++.+.+.+ ....+.||++||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~------~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALG------ANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGGCSHHHHHHHHHHHHHTT------CCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCcEEEEECC
Confidence 47899999876642 2567777777543 32 22222112222222333333222111 123467888888
Q ss_pred chHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 158 DGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
|++..+...+... ....+|+..||.
T Consensus 104 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGM-MFRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hcCCCCEEEECC
Confidence 8999988877631 125789999998
No 17
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=77.17 E-value=5.1 Score=38.29 Aligned_cols=84 Identities=14% Similarity=0.084 Sum_probs=48.8
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 019940 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (333)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGT 160 (333)
.++++|+..+.. ..+.+++.+.|....+|+-....|. .+.+.+.++.+. ..+.+.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~~v~~~p~--~~~v~~~~~~~~---------~~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHDEVVMHVP--IEVAERARAVAT---------DNEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEECCCCTTCB--HHHHHHHHHHHH---------HTTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEcceecCCC--HHHHHHHHHHHH---------hcCCCEEEEeCC-cH
Confidence 367888877642 2355667666764334432222222 222333332221 124578999999 89
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 161 vneVln~l~~~~~~~~~plgiIP~ 184 (333)
+..+...+.-. ..+|+..||.
T Consensus 100 ~iD~aK~iA~~---~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT---TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEcC
Confidence 98888877542 4689999996
No 18
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=74.68 E-value=9.7 Score=36.44 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=61.3
Q ss_pred cccccCeeeecCCc-cc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc----EEEeeccChhhHHHHHHH
Q 019940 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYV 130 (333)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~----v~~l~~~~p~~~~~~~~~ 130 (333)
.|..|..++.-... .. .......++++||..+.- ....+.+.+.+.|.... +|+-....|. .+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~--~~~v~~ 79 (383)
T 3ox4_A 5 TFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNPT--VTAVLE 79 (383)
T ss_dssp EEECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSCB--HHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCCC--HHHHHH
Confidence 46678877665431 11 112223467888887532 11125677777776533 2322222232 222333
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC---C------------CCCCCCEEEEeC--CCCcc
Q 019940 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNN 189 (333)
Q Consensus 131 ~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~---~------------~~~~~plgiIP~--GTGND 189 (333)
.++.+.+ .+.+.||++|| |++..+...+.-. . ..+.+|+..||. |||-.
T Consensus 80 ~~~~~~~---------~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe 145 (383)
T 3ox4_A 80 GLKILKD---------NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASE 145 (383)
T ss_dssp HHHHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTT
T ss_pred HHHHHHh---------cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhh
Confidence 3322211 24578999999 8888887765321 0 124789999997 45443
No 19
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=73.44 E-value=8.2 Score=36.51 Aligned_cols=106 Identities=12% Similarity=0.019 Sum_probs=57.7
Q ss_pred ccccccCeeeecCC-cccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEeeccC-hhhHHHHHH
Q 019940 58 NNYYIPNYILVSGS-EVQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKA-PDKVLHQLY 129 (333)
Q Consensus 58 ~~~~ip~~~~~~~~-~~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v-~~l~~~~-p~~~~~~~~ 129 (333)
+.|..|..++.-.. ...+ ..... ++++||..+.+-. .+.+.+...|.... + +.+.... +.+.++++.
T Consensus 5 ~~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~ 79 (370)
T 1jq5_A 5 RVFISPAKYVQGKNVITKIANYLEGIG-NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIA 79 (370)
T ss_dssp BCCCCCSEEEEETTGGGGHHHHHTTTC-SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHH
T ss_pred eEecCCCeEEECcCHHHHHHHHHHHcC-CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHH
Confidence 45677877665432 1111 11122 7899998765432 24566777675433 2 1222212 222222222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 130 ~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
+. +.+ .+.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 80 ~~---~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPT 118 (370)
T 1jq5_A 80 NI---ARK---------AEAAIVIGVGG-GKTLDTAKAVADE---LDAYIVIVPT 118 (370)
T ss_dssp HH---HHH---------TTCSEEEEEES-HHHHHHHHHHHHH---HTCEEEEEES
T ss_pred HH---HHh---------cCCCEEEEeCC-hHHHHHHHHHHHh---cCCCEEEecc
Confidence 22 111 23577888988 8888888777632 4688999996
No 20
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=73.31 E-value=6.1 Score=38.01 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=49.3
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCc--E--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v--~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GG 157 (333)
++++||.++.... +.+.+.+.|.... + +.+....+..-++.+.+.++.+.+.+ ....+.||++||
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~------~~r~d~IIavGG 112 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIG------IGRKDALVSLGG 112 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHT------CCTTCEEEEEES
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC
Confidence 7899999876532 3566666675432 2 22222122212222323332222111 123467888888
Q ss_pred chHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 158 DGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
|++..+...+... ....+|+..||.
T Consensus 113 -Gsv~D~ak~~Aa~-~~rgip~i~IPT 137 (368)
T 3qbe_A 113 -GAATDVAGFAAAT-WLRGVSIVHLPT 137 (368)
T ss_dssp -HHHHHHHHHHHHH-GGGCCEEEEEEC
T ss_pred -hHHHHHHHHHHHH-hccCCcEEEECC
Confidence 8888888776531 124688999996
No 21
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=68.60 E-value=11 Score=37.17 Aligned_cols=112 Identities=11% Similarity=0.010 Sum_probs=61.4
Q ss_pred cccccccccccCeeeecCC-cccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc--E-EEeeccChhhHH
Q 019940 53 KSKILNNYYIPNYILVSGS-EVQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--V-IDLGEKAPDKVL 125 (333)
Q Consensus 53 ~~~~~~~~~ip~~~~~~~~-~~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v-~~l~~~~p~~~~ 125 (333)
.+.+.+.|..|..++.-.. ...+ ......++++||..+.+-. .+.+.+.+.|.... + +.+....|..
T Consensus 59 ~~~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~~~-- 132 (450)
T 1ta9_A 59 EESKDRIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEASL-- 132 (450)
T ss_dssp CCCSSEEEECCSEEEEETTGGGGHHHHHTTTCSSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCCCH--
T ss_pred cCccceEEeCCceEEECcCHHHHHHHHHHhcCCCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCCCH--
Confidence 4556677888887766432 1111 1112234899998765432 24566666665432 2 1222222211
Q ss_pred HHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 126 HQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 126 ~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
+.+.+.++ ++++ +.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 133 ~~v~~~~~--------~~~~--~~D~IIAvGG-GSviD~AK~iA~~---~giP~I~IPT 177 (450)
T 1ta9_A 133 VELDKLRK--------QCPD--DTQVIIGVGG-GKTMDSAKYIAHS---MNLPSIICPT 177 (450)
T ss_dssp HHHHHHHT--------TSCT--TCCEEEEEES-HHHHHHHHHHHHH---TTCCEEEEES
T ss_pred HHHHHHHH--------HHhh--CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEEeC
Confidence 11222221 1222 4567888888 8888888877642 4689999996
No 22
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=68.09 E-value=22 Score=34.07 Aligned_cols=120 Identities=18% Similarity=0.190 Sum_probs=60.7
Q ss_pred ccccCeeeecCC-cccccc-CCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCcEEEeeccChhhHHHHHHHHHHHhhh
Q 019940 60 YYIPNYILVSGS-EVQRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 137 (333)
Q Consensus 60 ~~ip~~~~~~~~-~~~~~~-~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v~~l~~~~p~~~~~~~~~~l~~l~~ 137 (333)
|..|..++.-.. ...+.. ....++++||..+.+- ....+.+.+.+.|....+..+....+..-.+.+.+.++.+.+
T Consensus 27 ~~~p~~i~~G~g~l~~l~~~l~~g~r~liVtd~~~~--~~~g~~~~v~~~L~g~~~~~f~~v~~~p~~~~v~~~~~~~~~ 104 (408)
T 1oj7_A 27 LHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVRE 104 (408)
T ss_dssp EEEEEEEEESTTGGGGHHHHSCTTCEEEEEECSSHH--HHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHHHH
T ss_pred ecCCCeEEECCCHHHHHHHHHhcCCEEEEEECCchh--hhccHHHHHHHHhCCCEEEEeCCcCCCcCHHHHHHHHHHHHH
Confidence 555776665432 111111 0012788888865421 111256777777753333323222111112223333322211
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC--C----------------CCCCCCEEEEeC--CCCcchh
Q 019940 138 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--K----------------LPHSPPVATVPL--GTGNNIP 191 (333)
Q Consensus 138 ~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~--~----------------~~~~~plgiIP~--GTGNDfA 191 (333)
.+.+.||++|| |++..+...+.-. . ....+|+..||. |||-...
T Consensus 105 ---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt 168 (408)
T 1oj7_A 105 ---------QKVTFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESN 168 (408)
T ss_dssp ---------HTCCEEEEEES-HHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGS
T ss_pred ---------cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhC
Confidence 23578888988 8888887766431 0 115689999997 6655544
No 23
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=66.67 E-value=13 Score=34.98 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||..-+. .|.+ ..+++--||-==-||+.
T Consensus 95 Id~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 95 IDALVVIGGDGSYMGAM-RLTE----MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp CCEEEEEECHHHHHHHH-HHHH----TTCCEEEEEBCTTCCCT
T ss_pred CCEEEEECCCchHHHHH-HHHh----hCCCEEEEeccccCCCC
Confidence 35799999999987653 4444 36888889999999997
No 24
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=66.07 E-value=11 Score=35.45 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 019940 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (333)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDG 159 (333)
.++++|+.++... . +.+.+.+.|. ..+ +.+....+..-++.+.+.++.+.+.+ ....+.||++|| |
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~~~~~~~~ge~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VRHLLGLPGGEAAKSLEVYGKVLSWLAEKG------LPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CCCEEEECCSGGGSSHHHHHHHHHHHHHHT------CCTTCEEEEEES-H
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cCeEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEECC-c
Confidence 4689999986542 2 6677777775 222 22222122211222333332222111 123467888887 8
Q ss_pred HHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 160 TASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 160 TvneVln~l~~~~~~~~~plgiIP~ 184 (333)
++..+...+... ....+|+..||.
T Consensus 95 sv~D~ak~~A~~-~~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAAT-YLRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred HHHHHHHHHHHH-hccCCCEEEecC
Confidence 888888877631 125789999997
No 25
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=65.47 E-value=4.8 Score=37.97 Aligned_cols=92 Identities=20% Similarity=0.202 Sum_probs=50.0
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhccCcE--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 019940 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (333)
Q Consensus 81 ~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v--~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGD 158 (333)
.++++|+.++..... ..+.+.+.|....+ +.+....+..-.+.+.+.++.+.+.+ ....+.||++||
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEMQ------LNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHTT------CCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCceEEEECC-
Confidence 467999988655322 45667777754333 22222222111222333333222111 123367888887
Q ss_pred hHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 159 GTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
|++..+...+... ....+|+..||.
T Consensus 95 Gsv~D~ak~~A~~-~~rgip~i~IPT 119 (343)
T 3clh_A 95 GVISDMVGFASSI-YFRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEeCC
Confidence 8888888776521 125789999994
No 26
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=64.68 E-value=4.4 Score=39.05 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=30.3
Q ss_pred cEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeC--CCCcchh
Q 019940 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~--GTGNDfA 191 (333)
+.||++|| |++..+...+... ....+|+..||. ||+.|-+
T Consensus 107 d~iIalGG-Gsv~D~ak~~Aa~-~~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 107 TVVIALGG-GVIGDLTGFVAST-YMRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp CEEEEEES-HHHHHHHHHHHHH-GGGCCEEEEEECSHHHHHTTT
T ss_pred CEEEEECC-cHHHHHHHHHHHH-hcCCCCEEEECCchhhhhhcC
Confidence 67888887 8888888777531 125789999999 8888863
No 27
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=59.22 E-value=14 Score=34.80 Aligned_cols=38 Identities=29% Similarity=0.389 Sum_probs=29.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||+.-+. .|.+ ..+++--||-==-||+.
T Consensus 94 Id~LvvIGGdgS~~~a~-~L~~----~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 94 IDAVVVIGGDGSYHGAL-QLTR----HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp CCEEEEEECHHHHHHHH-HHHH----TTCCEEEEEEETTCCCT
T ss_pred CCEEEEECCchHHHHHH-HHHH----hCCCEEEEeecccCCCC
Confidence 35799999999987654 4444 25788889999999986
No 28
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=58.23 E-value=53 Score=31.01 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=58.7
Q ss_pred cccccCeeeecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEee--ccChhhHHHHHHH
Q 019940 59 NYYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLG--EKAPDKVLHQLYV 130 (333)
Q Consensus 59 ~~~ip~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~--~v~~l~--~~~p~~~~~~~~~ 130 (333)
.|.+|..++.-... ..+ ......++++|+..+..-... ..+.+++.+.|... .+..+. ...|. .+.+.+
T Consensus 7 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~--~~~v~~ 83 (387)
T 3bfj_A 7 DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPK--DTNVRD 83 (387)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCB--HHHHHH
T ss_pred eeeCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCC--HHHHHH
Confidence 35667776654321 111 111123789999887654320 01345555555432 222222 12222 222333
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC---C------------CCCCCCEEEEeC--CCCcch
Q 019940 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---K------------LPHSPPVATVPL--GTGNNI 190 (333)
Q Consensus 131 ~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~---~------------~~~~~plgiIP~--GTGNDf 190 (333)
.++.+.+ .+.+.||++|| |++..+...+.-. . ....+|+..||. |||-..
T Consensus 84 ~~~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 150 (387)
T 3bfj_A 84 GLAVFRR---------EQCDIIVTVGG-GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEV 150 (387)
T ss_dssp HHHHHHH---------TTCCEEEEEES-HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGG
T ss_pred HHHHHHh---------cCCCEEEEeCC-cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccc
Confidence 3322211 23467888888 8888887765421 0 014789999996 555443
No 29
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=58.09 E-value=91 Score=26.83 Aligned_cols=86 Identities=19% Similarity=0.232 Sum_probs=45.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 019940 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (333)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTv 161 (333)
++.||.=..| -..+.+.....|....+ |++.-.+.....+++.+..++...+ .-...|.++||.|-|
T Consensus 14 ~V~IimGS~S----D~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~--------g~~ViIa~AG~aahL 81 (173)
T 4grd_A 14 LVGVLMGSSS----DWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARER--------GLRAIIAGAGGAAHL 81 (173)
T ss_dssp SEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTT--------TCSEEEEEEESSCCH
T ss_pred eEEEEeCcHh----HHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhc--------CCeEEEEeccccccc
Confidence 3556554333 34455666666666555 6655433222222222222211111 112457899999999
Q ss_pred HHHHHHHhhCCCCCCCCEEEEeCCC
Q 019940 162 SWLLGVVSDLKLPHSPPVATVPLGT 186 (333)
Q Consensus 162 neVln~l~~~~~~~~~plgiIP~GT 186 (333)
--|+.++.. .|.||+ |.-+
T Consensus 82 pgvvA~~t~-----~PVIgV-Pv~~ 100 (173)
T 4grd_A 82 PGMLAAKTT-----VPVLGV-PVAS 100 (173)
T ss_dssp HHHHHHHCC-----SCEEEE-EECC
T ss_pred hhhheecCC-----CCEEEE-EcCC
Confidence 999999853 355665 6433
No 30
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=56.29 E-value=31 Score=32.98 Aligned_cols=113 Identities=14% Similarity=0.102 Sum_probs=57.1
Q ss_pred ccccccccCeeeecCCc-cc----cccCC--CCCcEEEEEcCCCCCCChhhHHHHHHHHhcc--CcE--EEeeccChhhH
Q 019940 56 ILNNYYIPNYILVSGSE-VQ----RSSLI--PSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQV--IDLGEKAPDKV 124 (333)
Q Consensus 56 ~~~~~~ip~~~~~~~~~-~~----~~~~~--~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~--~~v--~~l~~~~p~~~ 124 (333)
+.+.|..|+.++.-... .. ..... ..++++||..+.-- ...+. +.|.. ..+ |+-....|.
T Consensus 21 ~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~~~~~~liVtd~~~~---~~~l~----~~L~~~g~~~~~f~~v~~~pt-- 91 (375)
T 3rf7_A 21 SFKNFKCVPKMIFGRGSFVQLDTVLEQERTDANDFVVFLVDDVHQ---HKPLA----ARVPNKAHDLVIYVNVDDEPT-- 91 (375)
T ss_dssp TSCCCCCCSCEEESTTGGGGHHHHHHTTCCSTTCCEEEEEEGGGT---TSHHH----HHSCCCTTSEEEEECCSSCCB--
T ss_pred chhhhcCCCeEEEcCCHHHHHHHHHHHhcccCCCeEEEEECchhh---hhHHH----HHHHhcCCeEEEEeCCCCCCC--
Confidence 45789999988776532 11 11111 13678888876432 11233 33432 233 332222332
Q ss_pred HHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCC---------------CCCCCCEEEEeC
Q 019940 125 LHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL 184 (333)
Q Consensus 125 ~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~---------------~~~~~plgiIP~ 184 (333)
.+.+.+.++.+++.+ ..+.+.||++|| |++..+...+.-.- ..+.+|+..||.
T Consensus 92 ~~~v~~~~~~~~~~~------~~~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 92 TVQVDELTAQVKAFN------TKLPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHHHHHC------SSCCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHHHHhC------CCCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 122223322221110 112578999999 88888887664310 013689999995
No 31
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=55.56 E-value=9.5 Score=35.96 Aligned_cols=90 Identities=19% Similarity=0.267 Sum_probs=45.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCc-E--EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ-V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~-v--~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGD 158 (333)
++++||.++... ....+.+.+.| ... + +.+....+..-++.+.+.++.+.+.+ ....+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTKTFEQYQETLEYILSHH------VTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGCSHHHHHHHHHHHHTTC------CCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCceEEEECC-
Confidence 678898875432 22556666666 432 3 22222112112222333333222111 112367888888
Q ss_pred hHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 159 GTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
|++..+...+... ....+|+..||.
T Consensus 100 Gsv~D~ak~vA~~-~~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAAT-LLRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHH-BTTCCEEEEEEC
T ss_pred hHHHHHHHHHHHH-hccCCCEEEECC
Confidence 8888888877631 125789999997
No 32
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=54.66 E-value=7.1 Score=29.23 Aligned_cols=32 Identities=13% Similarity=0.097 Sum_probs=25.4
Q ss_pred CCcchhhhcCCCCCCCCCchHHHHHHHHHHH-cCCeEeEE
Q 019940 186 TGNNIPFSFGWGKKNPNTDQQAVLSFLEQVK-NAKEMQID 224 (333)
Q Consensus 186 TGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~-~~~~~~iD 224 (333)
|++++||.||+++. .+.++|-.+. +|.+..++
T Consensus 31 Ta~~IAkkLg~sK~-------~vNr~LY~L~kkG~V~~~~ 63 (75)
T 1sfu_A 31 TAISLSNRLKINKK-------KINQQLYKLQKEDTVKMVP 63 (75)
T ss_dssp CHHHHHHHTTCCHH-------HHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHCCCHH-------HHHHHHHHHHHCCCEecCC
Confidence 78999999999983 7888888876 56665554
No 33
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=52.25 E-value=15 Score=34.45 Aligned_cols=109 Identities=17% Similarity=0.073 Sum_probs=57.7
Q ss_pred cccccCeeeecCC-ccc---cccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccC--cEEEee-ccChhhHHHHHHHH
Q 019940 59 NYYIPNYILVSGS-EVQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLG-EKAPDKVLHQLYVT 131 (333)
Q Consensus 59 ~~~ip~~~~~~~~-~~~---~~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~--~v~~l~-~~~p~~~~~~~~~~ 131 (333)
.|..|..++.-.. ... .......++++||..+..-. ...+.+.+.|... .+..+. ...|. .+.+.+.
T Consensus 8 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~~~~~--~~~v~~~ 81 (354)
T 3ce9_A 8 RIAIPLILEVGNNKIYNIGQIIKKGNFKRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVETVKNID--FDEIGTN 81 (354)
T ss_dssp CCCCCSEEEEESSCGGGHHHHHGGGTCSEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEEECCCB--HHHHHHH
T ss_pred EEeCCcEEEECCCHHHHHHHHHHhcCCCeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEecCCCCC--HHHHHHH
Confidence 4556776655432 111 11111235899998865532 3556677777542 232122 22331 2212222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCC
Q 019940 132 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (333)
Q Consensus 132 l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTG 187 (333)
+.+. + .+.+.||++|| |++..+...+.-. ..+|+..||.=.+
T Consensus 82 -~~~~--------~-~~~d~IIavGG-Gsv~D~aK~vA~~---~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 82 -AFKI--------P-AEVDALIGIGG-GKAIDAVKYMAFL---RKLPFISVPTSTS 123 (354)
T ss_dssp -HTTS--------C-TTCCEEEEEES-HHHHHHHHHHHHH---HTCCEEEEESCCS
T ss_pred -HHhh--------h-cCCCEEEEECC-hHHHHHHHHHHhh---cCCCEEEecCccc
Confidence 2211 1 23467888887 8888888777532 4689999997444
No 34
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=50.71 E-value=25 Score=33.05 Aligned_cols=38 Identities=34% Similarity=0.490 Sum_probs=29.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfA 191 (333)
-+.++++|||||..-+ ..+.+ ..+++--||-==-||+.
T Consensus 94 Id~L~~IGGdgS~~~a-~~l~~----~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 94 IEGLVVIGGDGSYMGA-KKLTE----HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp CCEEEEEECTTHHHHH-HHHHH----TTCCEEEEEEETTCCCT
T ss_pred CCEEEEeCCcHHHHHH-HHHhc----cCCcEEEeeccccCCCC
Confidence 3579999999998765 34554 35788889998899986
No 35
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=50.18 E-value=23 Score=35.42 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=29.8
Q ss_pred CcEEEEEcCchHHHHHH---HHHhhCCCCCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVl---n~l~~~~~~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||..-+. +.+.+. ...+++--||-==-||+.
T Consensus 190 Id~LvvIGGdgS~~~A~~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 190 VNILFTVGGDGTQRGALVISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp CSEEEEEECHHHHHHHHHHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHHh--CCCceEEeccccccCCCC
Confidence 35799999999987543 222221 236889999999999996
No 36
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=50.07 E-value=8.4 Score=32.70 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=34.0
Q ss_pred EEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 019940 154 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (333)
Q Consensus 154 v~GGDGTvneVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~~~~~~~~~~~~l~~I~~~ 218 (333)
.+|||-|-+ ++.-+...-+..+|-+-+|=+|| ||+++..+... ......++.++++.+...
T Consensus 57 Gi~G~tt~~-~l~r~~~~v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~~~ 117 (209)
T 4hf7_A 57 GISGQTSYQ-FLLRFREDVINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAKAN 117 (209)
T ss_dssp ECTTCCHHH-HHHHHHHHTGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHHHT
T ss_pred ccCcccHHH-HHHHHHHHHHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHhcc
Confidence 578986643 44444321122467788999998 99987544221 011123456666666543
No 37
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=46.32 E-value=82 Score=30.01 Aligned_cols=119 Identities=18% Similarity=0.161 Sum_probs=58.7
Q ss_pred ccccCeeeecCC-cccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEeeccChhhHHHHHHHHHH
Q 019940 60 YYIPNYILVSGS-EVQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLE 133 (333)
Q Consensus 60 ~~ip~~~~~~~~-~~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v~~l~~~~p~~~~~~~~~~l~ 133 (333)
|..|..++.-.. ...+ ......++++||..+.+-. ...+.+.+.+.|.... +..+....+..-.+.+.+.++
T Consensus 18 ~~~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~--~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~ 95 (407)
T 1vlj_A 18 FHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIK--KNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVE 95 (407)
T ss_dssp ECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHH--HSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHH
T ss_pred EecCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHh--hccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHH
Confidence 555777665432 1111 1111236888888633211 1125666766665432 222222111111222333332
Q ss_pred HhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhCC---------------CCCCCCEEEEeC--CCCcch
Q 019940 134 KFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNI 190 (333)
Q Consensus 134 ~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~~---------------~~~~~plgiIP~--GTGNDf 190 (333)
.+.+ .+.+.||++|| |++..+...+.-.- ....+|+..||. |||--.
T Consensus 96 ~~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSev 159 (407)
T 1vlj_A 96 VAKK---------EKVEAVLGVGG-GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEM 159 (407)
T ss_dssp HHHH---------TTCSEEEEEES-HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGG
T ss_pred HHHh---------cCCCEEEEeCC-hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhh
Confidence 2211 23477888888 88888877664310 125789999996 554443
No 38
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=45.40 E-value=1e+02 Score=26.16 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=23.3
Q ss_pred cEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCC
Q 019940 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTG 187 (333)
..|.++|+.+-|--|+.++.. .|.||+ |.-++
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 92 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASLTT-----LPVIGV-PIETK 92 (163)
T ss_dssp EEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCT
T ss_pred EEEEECCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 468899999999999999853 344554 55444
No 39
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=44.93 E-value=1.5e+02 Score=25.60 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=46.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 019940 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (333)
Q Consensus 82 ~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGT 160 (333)
-|...|+- |+..-..+.+.....|....+ |++.-.+.-...+++.+..++..++ .-...|.++||.+-
T Consensus 13 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~--------g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEER--------GIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTT--------TCCEEEEEEESSCC
T ss_pred CCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhC--------CCcEEEEecCcccc
Confidence 34444443 444444566666666766555 6655433222122222222211100 11246889999999
Q ss_pred HHHHHHHHhhCCCCCCCCEEEEeCCCC
Q 019940 161 ASWLLGVVSDLKLPHSPPVATVPLGTG 187 (333)
Q Consensus 161 vneVln~l~~~~~~~~~plgiIP~GTG 187 (333)
|--|+.++.. .|+-=+|.-++
T Consensus 82 LpgvvA~~t~------~PVIgVP~~~~ 102 (183)
T 1o4v_A 82 LPGMVASITH------LPVIGVPVKTS 102 (183)
T ss_dssp HHHHHHHHCS------SCEEEEEECCT
T ss_pred cHHHHHhccC------CCEEEeeCCCC
Confidence 9999999853 44444555444
No 40
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=43.59 E-value=1.4e+02 Score=25.85 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=44.9
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 019940 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (333)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTv 161 (333)
.+.||.=..| -..+.+.....|....+ |++.-.+.....+++.+..++...+| -...|.++||.+-|
T Consensus 23 ~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g--------~~ViIa~AG~aa~L 90 (182)
T 1u11_A 23 VVGIIMGSQS----DWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERG--------LNVIIAGAGGAAHL 90 (182)
T ss_dssp SEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTT--------CCEEEEEEESSCCH
T ss_pred EEEEEECcHH----HHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCC--------CcEEEEecCchhhh
Confidence 4666654333 34455566666665554 66554332221222222221111000 12468899999999
Q ss_pred HHHHHHHhhCCCCCCCCEEEEeCCCC
Q 019940 162 SWLLGVVSDLKLPHSPPVATVPLGTG 187 (333)
Q Consensus 162 neVln~l~~~~~~~~~plgiIP~GTG 187 (333)
--|+.++.. .|.||+ |.-++
T Consensus 91 pgvvA~~t~-----~PVIgV-P~~~~ 110 (182)
T 1u11_A 91 PGMCAAWTR-----LPVLGV-PVESR 110 (182)
T ss_dssp HHHHHHHCS-----SCEEEE-EECCT
T ss_pred HHHHHhccC-----CCEEEe-eCCCC
Confidence 999999853 344554 54443
No 41
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=43.55 E-value=50 Score=31.16 Aligned_cols=118 Identities=12% Similarity=0.091 Sum_probs=59.1
Q ss_pred cccccCeeeecCCc-ccc---ccCCCCCcEEEEEcCCCCCCChhhHHHHHHHHhccCc--EEEeeccChhhHHHHHHHHH
Q 019940 59 NYYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 132 (333)
Q Consensus 59 ~~~ip~~~~~~~~~-~~~---~~~~~~~~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~--v~~l~~~~p~~~~~~~~~~l 132 (333)
.|..|..++.-... ..+ ......++++||..+..- ...+.+++.+.|.... +..+....+..-.+.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~---~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 81 (386)
T 1rrm_A 5 RMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLV---QCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 81 (386)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHH---HTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred cccCCceEEECcCHHHHHHHHHHHcCCCEEEEEECcchh---hchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46677776654321 111 111123678888765431 1125666777775432 22222211111122233333
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC---CC--------------CCCCCEEEEeC--CCCcc
Q 019940 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL---KL--------------PHSPPVATVPL--GTGNN 189 (333)
Q Consensus 133 ~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~---~~--------------~~~~plgiIP~--GTGND 189 (333)
+.+.+ .+.+.||++|| |++..+...+.-. .. .+.+|+..||. |||-.
T Consensus 82 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSe 147 (386)
T 1rrm_A 82 GVFQN---------SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAE 147 (386)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTT
T ss_pred HHHHh---------cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhh
Confidence 22211 23478999988 8888887665321 00 24789999997 55443
No 42
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=43.27 E-value=1.1e+02 Score=26.31 Aligned_cols=81 Identities=12% Similarity=0.212 Sum_probs=41.3
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC
Q 019940 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (333)
Q Consensus 93 G~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~ 171 (333)
|+..-..+.+.....|....+ |++.-.+.-...+++.+..++..++| -...|.++||.+-|--|+.++..
T Consensus 19 GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g--------~~ViIa~AG~aa~LpgvvA~~t~- 89 (170)
T 1xmp_A 19 GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERG--------LKVIIAGAGGAAHLPGMVAAKTN- 89 (170)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTT--------CCEEEEEEESSCCHHHHHHTTCC-
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCC--------CcEEEEECCchhhhHHHHHhccC-
Confidence 433334556666666665554 66554332221222222221111000 12468899999999999888743
Q ss_pred CCCCCCCEEEEeCCCC
Q 019940 172 KLPHSPPVATVPLGTG 187 (333)
Q Consensus 172 ~~~~~~plgiIP~GTG 187 (333)
.|.||+ |.-++
T Consensus 90 ----~PVIgV-P~~~~ 100 (170)
T 1xmp_A 90 ----LPVIGV-PVQSK 100 (170)
T ss_dssp ----SCEEEE-EECCT
T ss_pred ----CCEEEe-eCCCC
Confidence 344554 55443
No 43
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=42.38 E-value=1.2e+02 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=23.4
Q ss_pred cEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCCCC
Q 019940 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~GTG 187 (333)
..|.++|+.+-|--|+.++.. .|.||+ |.-++
T Consensus 65 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 96 (174)
T 3lp6_A 65 VIIAGAGGAAHLPGMVAAATP-----LPVIGV-PVPLG 96 (174)
T ss_dssp EEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCS
T ss_pred EEEEecCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 568899999999999999853 344554 55444
No 44
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=41.46 E-value=1.3e+02 Score=25.73 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=42.6
Q ss_pred CCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhhC
Q 019940 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (333)
Q Consensus 93 G~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvneVln~l~~~ 171 (333)
|+..-..+.+.....|....+ |++.-.+.....+++.+.++++.+++ -...|.++|+.+-|--|+.++..
T Consensus 13 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g--------~~ViIa~AG~aa~LpgvvA~~t~- 83 (166)
T 3oow_A 13 GSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERG--------LKVIIAGAGGAAHLPGMVAAKTT- 83 (166)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTT--------CCEEEEEECSSCCHHHHHHHTCS-
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCC--------CcEEEEECCcchhhHHHHHhccC-
Confidence 333334556666666766554 66554332221222333322211111 13458899999999999988753
Q ss_pred CCCCCCCEEEEeCCCC
Q 019940 172 KLPHSPPVATVPLGTG 187 (333)
Q Consensus 172 ~~~~~~plgiIP~GTG 187 (333)
.|+-=+|.-++
T Consensus 84 -----~PVIgVP~~~~ 94 (166)
T 3oow_A 84 -----LPVLGVPVKSS 94 (166)
T ss_dssp -----SCEEEEECCCT
T ss_pred -----CCEEEeecCcC
Confidence 44444465444
No 45
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=37.77 E-value=32 Score=34.93 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=29.1
Q ss_pred cEEEEEcCchHHHHHHHHHhhC--CCCCCCCEEEEeCCCCcchh
Q 019940 150 LRLIVAGGDGTASWLLGVVSDL--KLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~--~~~~~~plgiIP~GTGNDfA 191 (333)
+.+|++|||||+.-+.. |.+. .....+++--||-==-||++
T Consensus 168 d~LvvIGGdgS~~~A~~-L~e~~~~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 168 NAIIIIGGDDSNTNAAI-LAEYFKKNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp SEEEEEESHHHHHHHHH-HHHHHHHTTCCCEEEEEEEETTCCCC
T ss_pred CEEEEeCCCcHHHHHHH-HHHHHHHhCCCCcEEEeccccCCCCC
Confidence 57999999999875542 2220 01246889999988899996
No 46
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=34.17 E-value=84 Score=28.57 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=24.2
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeC
Q 019940 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (333)
Q Consensus 141 ~la~~~~~~~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~ 184 (333)
+++.-....+.+|..|| +|+.|++- ...|.-+||.
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~--------~g~P~i~ip~ 252 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALL--------LKANFKAICY 252 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHH--------TTCCEEEECC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHH--------cCCCEEEEeC
Confidence 33333345677888999 99999863 2577888885
No 47
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=33.98 E-value=1.7e+02 Score=25.10 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=43.5
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 019940 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (333)
Q Consensus 83 ~vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTv 161 (333)
++.||. |+..-..+.+.....|....+ |++.-.+.....+++.+.+++...+ .-...|.++|+.+-|
T Consensus 14 ~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~--------g~~ViIa~AG~aa~L 81 (174)
T 3kuu_A 14 KIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEAN--------GLHVIIAGNGGAAHL 81 (174)
T ss_dssp CEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTT--------TCSEEEEEEESSCCH
T ss_pred cEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhC--------CCcEEEEECChhhhh
Confidence 355554 333334455666666665554 5654433222222222222211111 113468899999999
Q ss_pred HHHHHHHhhCCCCCCCCEEEEe
Q 019940 162 SWLLGVVSDLKLPHSPPVATVP 183 (333)
Q Consensus 162 neVln~l~~~~~~~~~plgiIP 183 (333)
--|+.++.. .|.||+=+
T Consensus 82 pgvvA~~t~-----~PVIgVP~ 98 (174)
T 3kuu_A 82 PGMLAAKTL-----VPVLGVPV 98 (174)
T ss_dssp HHHHHHTCS-----SCEEEEEE
T ss_pred HHHHHhccC-----CCEEEeeC
Confidence 999988753 34566533
No 48
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=33.28 E-value=13 Score=34.31 Aligned_cols=13 Identities=54% Similarity=0.994 Sum_probs=11.3
Q ss_pred cEEEEEcCchHHH
Q 019940 150 LRLIVAGGDGTAS 162 (333)
Q Consensus 150 ~~IVv~GGDGTvn 162 (333)
-+||||||+||-+
T Consensus 47 q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 47 QRIIFCGGEGTSS 59 (275)
T ss_dssp CEEEEESSSSSST
T ss_pred cEEEEecCCCCCC
Confidence 4899999999965
No 49
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=32.71 E-value=1.8e+02 Score=25.17 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=39.2
Q ss_pred EEEEEcCCCCCCChhhHHHHHHHHhccCcE-EEeeccChhhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 019940 84 VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (333)
Q Consensus 84 vlvIvNP~SG~~~g~~~~~~l~~~L~~~~v-~~l~~~~p~~~~~~~~~~l~~l~~~g~~la~~~~~~~~IVv~GGDGTvn 162 (333)
+-||.=..| -..+.+...+.|.+..| |++.-.+.-...+++.+.++....+ .-...|.++||.+-+-
T Consensus 25 V~IimGS~S----D~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~--------g~~ViIa~AG~aahLp 92 (181)
T 4b4k_A 25 VGVIMGSTS----DWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARER--------GLKVIIAGAGGAAHLP 92 (181)
T ss_dssp EEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTT--------TCCEEEEEECSSCCHH
T ss_pred EEEEECCHh----HHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhc--------CceEEEEeccccccch
Confidence 555554333 34566666677776665 6655432222222232222211100 1124577999999999
Q ss_pred HHHHHHh
Q 019940 163 WLLGVVS 169 (333)
Q Consensus 163 eVln~l~ 169 (333)
-++.++.
T Consensus 93 GvvAa~T 99 (181)
T 4b4k_A 93 GMVAAKT 99 (181)
T ss_dssp HHHHTTC
T ss_pred hhHHhcC
Confidence 9987764
No 50
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=32.00 E-value=11 Score=27.16 Aligned_cols=11 Identities=9% Similarity=0.090 Sum_probs=10.0
Q ss_pred EEEEEcCchHH
Q 019940 151 RLIVAGGDGTA 161 (333)
Q Consensus 151 ~IVv~GGDGTv 161 (333)
-|+|++||||+
T Consensus 40 GViVg~~dgtv 50 (65)
T 2x9a_A 40 GIGIGYDNDTS 50 (65)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEECCCCCE
Confidence 49999999997
No 51
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=30.50 E-value=69 Score=31.24 Aligned_cols=41 Identities=29% Similarity=0.349 Sum_probs=28.4
Q ss_pred cEEEEEcCchHHHHHHHHHhhC--CCCCCCCEEEEeCCCCcchh
Q 019940 150 LRLIVAGGDGTASWLLGVVSDL--KLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~--~~~~~~plgiIP~GTGNDfA 191 (333)
+.+|++|||||+.-+.. |.+. .....+++--||-==-||++
T Consensus 106 d~Lv~IGGdgS~~~A~~-L~~~~~~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 106 GYFFYNGGGDSADTCLK-VSQLSGTLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp EEEEEEESHHHHHHHHH-HHHHHHHTTCCCEEEEEECCTTCCCS
T ss_pred CEEEEeCCchHHHHHHH-HHHHHHHhCCCccEEEecccccCCCc
Confidence 56999999999875532 2220 01235788889988899995
No 52
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=30.30 E-value=1.5e+02 Score=25.09 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=17.9
Q ss_pred CcEEEEEcCchHHHHHHHHHh
Q 019940 149 RLRLIVAGGDGTASWLLGVVS 169 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~ 169 (333)
...|.++|+.+-+--|+.++.
T Consensus 53 ~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 53 DVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp SEEEEEEESSCCHHHHHHTTC
T ss_pred CEEEEEcCchhhhHHHHHhcc
Confidence 456889999999999988874
No 53
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=29.79 E-value=58 Score=34.33 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=29.6
Q ss_pred cEEEEEcCchHHHHHHHH---HhhCCCCCCCCEEEEeCCCCcchh
Q 019940 150 LRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~---l~~~~~~~~~plgiIP~GTGNDfA 191 (333)
+.+|++|||||+.-+..- ....+ ...+|+--||-==-||++
T Consensus 491 d~LvvIGGdgS~~~a~~L~~~~~~~~-~~~i~vvgiPkTIDNDl~ 534 (762)
T 3o8l_A 491 QGLVIIGGFEAYTGGLELMEGRKQFD-ELCIPFVVIPATVSNNVP 534 (762)
T ss_dssp CCEEEEESHHHHHHHHHHHHHHHHCS-TTCSCEEEEEBCTTCCCT
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhcc-ccCCCEEeeccccCCCCC
Confidence 569999999998766432 11111 136888899999999996
No 54
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=28.56 E-value=1.2e+02 Score=32.85 Aligned_cols=42 Identities=24% Similarity=0.306 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCC--C-CCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLK--L-PHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~--~-~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||+.-+ ..|.+.. . ...+|+--||-==-||++
T Consensus 689 Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 689 FDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp CSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 3679999999998654 3444311 1 126888889999999995
No 55
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=28.42 E-value=33 Score=28.97 Aligned_cols=64 Identities=16% Similarity=0.097 Sum_probs=37.5
Q ss_pred EEEEcCchHHH---HHHHHHhhCCCCCCCCEEEEeCCCCcchhhhcCCCCCC---CCCchHHHHHHHHHHHcC
Q 019940 152 LIVAGGDGTAS---WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN---PNTDQQAVLSFLEQVKNA 218 (333)
Q Consensus 152 IVv~GGDGTvn---eVln~l~~~~~~~~~plgiIP~GTGNDfAR~LG~~~~~---~~~~~~~~~~~l~~I~~~ 218 (333)
-..++|+.|.. +++..+.. +..++-+-+|=+|| ||+.+......-. ...-..++.++++.+...
T Consensus 57 N~g~~G~t~~~~~~~~~~~~~~--~~~~pd~Vii~~G~-ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~ 126 (232)
T 3dc7_A 57 NLGISGSTIGSRYDAMAVRYQA--IPEDADFIAVFGGV-NDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTN 126 (232)
T ss_dssp EEECTTCCSSTTSSCHHHHGGG--SCTTCSEEEEECCH-HHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHH
T ss_pred EeeeCCcccccChHHHHHHHHh--cCCCCCEEEEEEec-cccccCcCCccccccchHHHHHHHHHHHHHHHHh
Confidence 44667777765 45555543 33467788998886 9988743222100 011123778888888753
No 56
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=26.20 E-value=3e+02 Score=23.40 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=21.9
Q ss_pred cEEEEEcCchHHHHHHHHHhhCCCCCCCCEEEEeCC
Q 019940 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~~~~~~~~plgiIP~G 185 (333)
..|.++|+.+.|--|+.++.. .|.||+ |.-
T Consensus 64 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~ 93 (169)
T 3trh_A 64 VFIAAAGLAAHLAGTIAAHTL-----KPVIGV-PMA 93 (169)
T ss_dssp EEEEEECSSCCHHHHHHHTCS-----SCEEEE-ECC
T ss_pred EEEEECChhhhhHHHHHhcCC-----CCEEEe-ecC
Confidence 458899999999999988753 344555 543
No 57
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=24.80 E-value=1.1e+02 Score=32.95 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhhCC--C-CCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDLK--L-PHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~~--~-~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||+.-+. .|.+.. . ...+|+--||-==-||++
T Consensus 663 Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vVGIPkTIDNDl~ 707 (941)
T 3opy_B 663 FDGLILVGGFEAFISLH-QLERARINYPSLRIPLVLIPATISNNVP 707 (941)
T ss_dssp CSEEEEEESHHHHHHHH-HHHHGGGTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHHH-HHHHHHHhcCccCCcEEeeeccccCCCC
Confidence 35799999999986543 333211 1 126888999999999986
No 58
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=23.75 E-value=1.4e+02 Score=31.41 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHH----------HHHhhC-C-------CCCCCCEEEEeCCCCcchhh
Q 019940 149 RLRLIVAGGDGTASWLL----------GVVSDL-K-------LPHSPPVATVPLGTGNNIPF 192 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVl----------n~l~~~-~-------~~~~~plgiIP~GTGNDfAR 192 (333)
-+.+|++|||||+.-+. ..|.+. . ....+++--||-==-||++-
T Consensus 99 Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGiPkTIDNDl~g 160 (766)
T 3o8o_B 99 VDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTVGSIDNDMST 160 (766)
T ss_dssp CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHTCCCEEEEEEBCTTCCCTT
T ss_pred CCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhcccccHHHHhcCCCCcEEEEeccccCCCCC
Confidence 35799999999997552 223321 0 01367888899888899974
No 59
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=22.91 E-value=2.8e+02 Score=23.34 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.8
Q ss_pred cEEEEEcCchHHHHHHHHHhh
Q 019940 150 LRLIVAGGDGTASWLLGVVSD 170 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~ 170 (333)
..|.++|+.+-|--|+.++..
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp EEEEECCSSCCHHHHHHHHSS
T ss_pred EEEEECCchhhhHHHHHhccC
Confidence 357799999999999999853
No 60
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=21.89 E-value=2.8e+02 Score=27.03 Aligned_cols=21 Identities=14% Similarity=0.093 Sum_probs=17.9
Q ss_pred cEEEEEcCchHHHHHHHHHhh
Q 019940 150 LRLIVAGGDGTASWLLGVVSD 170 (333)
Q Consensus 150 ~~IVv~GGDGTvneVln~l~~ 170 (333)
..|.++||.|.+--|+.++..
T Consensus 324 viIa~AG~~a~Lpgvva~~t~ 344 (425)
T 2h31_A 324 VFVAVAGRSNGLGPVMSGNTA 344 (425)
T ss_dssp EEEEECCSSCCHHHHHHHHCS
T ss_pred EEEEEcCcccchHhHHhccCC
Confidence 458899999999999999853
No 61
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=21.61 E-value=1.6e+02 Score=31.18 Aligned_cols=42 Identities=26% Similarity=0.282 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhhC-C-C-CCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLLGVVSDL-K-L-PHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVln~l~~~-~-~-~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||..-+. .|.+. . . ...+|+--||-==-||+.
T Consensus 484 Id~LvvIGGdgS~~~a~-~L~~~~~~~~~~~i~vIgiPkTIDNDl~ 528 (787)
T 3o8o_A 484 LDGLIILGGFEGFRSLK-QLRDGRTQHPIFNIPMCLIPATVSNNVP 528 (787)
T ss_dssp CSEEEEEESHHHHHHHH-HHHHHTTTCGGGGSCEEEEEBCTTCCCT
T ss_pred CCEEEEeCCchHHHHHH-HHHHHHHhcCccCCceeecccccccCCC
Confidence 35799999999987654 33321 1 1 125888999999999996
No 62
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=20.79 E-value=1.8e+02 Score=30.66 Aligned_cols=43 Identities=16% Similarity=0.099 Sum_probs=28.8
Q ss_pred CcEEEEEcCchHHHHHH----------HHHhhC--------CCCCCCCEEEEeCCCCcchh
Q 019940 149 RLRLIVAGGDGTASWLL----------GVVSDL--------KLPHSPPVATVPLGTGNNIP 191 (333)
Q Consensus 149 ~~~IVv~GGDGTvneVl----------n~l~~~--------~~~~~~plgiIP~GTGNDfA 191 (333)
-+.+|++|||||+.-+. ..|.+. .....+++--||-==-||++
T Consensus 110 Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIPkTIDNDl~ 170 (762)
T 3o8l_A 110 ITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLVGSIDNDFC 170 (762)
T ss_dssp CCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEEBCTTCCCS
T ss_pred CCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEeecCcccCCC
Confidence 35799999999987654 122210 01135778888988889997
Done!