Query 019942
Match_columns 333
No_of_seqs 142 out of 158
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 09:24:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x0j_A Malate dehydrogenase; o 38.8 18 0.00062 33.8 3.1 53 190-256 68-120 (294)
2 3ldh_A Lactate dehydrogenase; 34.8 41 0.0014 32.0 4.9 53 190-256 88-140 (330)
3 2gso_A Phosphodiesterase-nucle 31.9 21 0.00072 33.4 2.4 32 226-257 187-220 (393)
4 4h08_A Putative hydrolase; GDS 31.4 2.1E+02 0.0072 23.2 9.0 50 188-256 71-120 (200)
5 1auk_A Arylsulfatase A; cerebr 28.5 37 0.0013 33.2 3.5 34 225-258 231-266 (489)
6 1mld_A Malate dehydrogenase; o 27.4 52 0.0018 30.5 4.2 54 190-257 67-120 (314)
7 2w5v_A Alkaline phosphatase; p 26.8 38 0.0013 31.9 3.1 30 226-256 273-302 (375)
8 2vqr_A Putative sulfatase; pho 26.4 42 0.0014 33.0 3.5 33 227-259 323-357 (543)
9 1fsu_A N-acetylgalactosamine-4 26.3 36 0.0012 33.1 2.9 33 226-258 228-262 (492)
10 5mdh_A Malate dehydrogenase; o 26.3 50 0.0017 31.1 3.9 53 190-256 78-131 (333)
11 4aj2_A L-lactate dehydrogenase 26.1 59 0.002 30.7 4.4 53 190-256 86-138 (331)
12 3b5q_A Putative sulfatase YIDJ 25.8 35 0.0012 33.2 2.8 34 226-259 253-288 (482)
13 3lxq_A Uncharacterized protein 25.5 1.4E+02 0.0049 28.3 7.0 34 225-258 273-308 (450)
14 3ed4_A Arylsulfatase; structur 24.3 52 0.0018 31.7 3.7 33 226-258 273-307 (502)
15 3tl2_A Malate dehydrogenase; c 23.3 46 0.0016 31.1 3.0 53 190-256 77-129 (315)
16 3hhp_A Malate dehydrogenase; M 22.9 46 0.0016 31.1 2.9 53 190-256 68-120 (312)
17 1p49_A Steryl-sulfatase; stero 22.4 55 0.0019 32.5 3.5 34 226-259 290-325 (562)
18 2qzu_A Putative sulfatase YIDJ 22.4 58 0.002 31.5 3.6 33 226-258 282-316 (491)
19 1oju_A MDH, malate dehydrogena 22.2 53 0.0018 30.4 3.1 53 190-256 68-120 (294)
20 3vku_A L-LDH, L-lactate dehydr 22.0 62 0.0021 30.5 3.6 53 190-256 75-127 (326)
21 4h7p_A Malate dehydrogenase; s 20.7 61 0.0021 30.8 3.3 53 190-256 99-152 (345)
22 2w8d_A Processed glycerol phos 20.2 72 0.0025 30.5 3.7 34 225-258 226-261 (436)
No 1
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=38.78 E-value=18 Score=33.76 Aligned_cols=53 Identities=19% Similarity=0.385 Sum_probs=44.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|++++..+.+. .++.+|.+ .|..|-++++++...+.+.+++=.++-+|.|
T Consensus 68 ~~aDvVvitAG~pr---kpGmtR~d-----------Ll~~Na~I~~~i~~~i~~~~p~aivlvvsNP 120 (294)
T 2x0j_A 68 KGSEIIVVTAGLAR---KPGMTRLD-----------LAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp TTCSEEEECCCCCC---CSSSCHHH-----------HHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred CCCCEEEEecCCCC---CCCCchHH-----------HHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence 35689999854432 25678999 9999999999999999988999899999999
No 2
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=34.78 E-value=41 Score=31.96 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=43.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. ..+++|.+ .+..|-++++++...+.+.+++=-+|-+|.|
T Consensus 88 ~daDiVIitaG~p~---kpG~tR~d-----------ll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 88 AGSKLVVITAGARQ---QEGESRLN-----------LVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp SSCSEEEECCSCCC---CSSCCTTG-----------GGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCEEEEeCCCCC---CCCCCHHH-----------HHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 46789999843332 25678999 9999999999999999888888889999999
No 3
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=31.94 E-value=21 Score=33.41 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=27.6
Q ss_pred ccccccHHHHHHHHHhhhcC--CcEEEEEEecCC
Q 019942 226 WFIHAGEVISELIDSVEKSG--AKYTVLYVSDPV 257 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~ 257 (333)
.+..-|+.|+++++.|++.+ .+..||||||--
T Consensus 187 ~i~~~D~~ig~ll~~L~~~g~~~nT~vi~tSDHG 220 (393)
T 2gso_A 187 AVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHG 220 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGEEEEEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEcCCC
Confidence 67778999999999999766 679999999983
No 4
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=31.36 E-value=2.1e+02 Score=23.22 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=31.5
Q ss_pred cCCCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 188 LKGQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 188 ~~~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
.+.++|+|+|.. ++. + +.. ...+.-+-+.++++.+.+.+++-.||+.+.+
T Consensus 71 ~~~~pd~Vvi~~-G~N-----D--~~~-----------~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~ 120 (200)
T 4h08_A 71 KNTKFDVIHFNN-GLH-----G--FDY-----------TEEEYDKSFPKLIKIIRKYAPKAKLIWANTT 120 (200)
T ss_dssp HHSCCSEEEECC-CSS-----C--TTS-----------CHHHHHHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred hcCCCCeEEEEe-eeC-----C--CCC-----------CHHHHHHHHHHHHHHHhhhCCCccEEEeccC
Confidence 356889999985 231 1 111 1222345578888888877888778877754
No 5
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=28.51 E-value=37 Score=33.15 Aligned_cols=34 Identities=12% Similarity=0.278 Sum_probs=28.2
Q ss_pred cccccccHHHHHHHHHhhhcC--CcEEEEEEecCCC
Q 019942 225 PWFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVR 258 (333)
Q Consensus 225 ~~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~ 258 (333)
-.+..-|+.|+++++.|++.| .+..||||||--.
T Consensus 231 ~~v~~~D~~vG~ll~~L~~~gl~dnTiViftSDhG~ 266 (489)
T 1auk_A 231 DSLMELDAAVGTLMTAIGDLGLLEETLVIFTADNGP 266 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCc
Confidence 356778999999999999876 5688999999854
No 6
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=27.39 E-value=52 Score=30.47 Aligned_cols=54 Identities=19% Similarity=0.370 Sum_probs=42.1
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecCC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDPV 257 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P~ 257 (333)
...|+++++.+.+. ..++.|.+ .+..|-.++.++...+.+..++-.+|++|.|.
T Consensus 67 ~~aDvVvi~ag~~~---~~g~~r~d-----------l~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 67 KGCDVVVIPAGVPR---KPGMTRDD-----------LFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp TTCSEEEECCSCCC---CTTCCGGG-----------GHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred CCCCEEEECCCcCC---CCCCcHHH-----------HHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 45689999843331 24467888 88888899999999998878888899999994
No 7
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=26.78 E-value=38 Score=31.90 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=26.5
Q ss_pred ccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 226 WFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
.+..-|+.|+++++.|++.+ +..||||||-
T Consensus 273 ~v~~~D~~vG~il~~L~~~g-nTlviftsDh 302 (375)
T 2w5v_A 273 EINDFDDAIGTALAFAKKDG-NTLVIVTSDH 302 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHHhhCC-CEEEEEECcC
Confidence 56777999999999999877 8889999998
No 8
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A
Probab=26.37 E-value=42 Score=33.00 Aligned_cols=33 Identities=9% Similarity=0.341 Sum_probs=26.3
Q ss_pred cccccHHHHHHHHHhhhcC--CcEEEEEEecCCCC
Q 019942 227 FIHAGEVISELIDSVEKSG--AKYTVLYVSDPVRS 259 (333)
Q Consensus 227 l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~~ 259 (333)
+..-|+.|+++++.|++.| .+..||||||--..
T Consensus 323 i~~~D~~iG~ll~~L~~~gl~dnTiIiftSDHG~~ 357 (543)
T 2vqr_A 323 ITEVDDCLGRVFSYLDETGQWDDTLIIFTSDHGEQ 357 (543)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCcc
Confidence 3456899999999999876 56888899998543
No 9
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=26.33 E-value=36 Score=33.12 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=27.4
Q ss_pred ccccccHHHHHHHHHhhhcC--CcEEEEEEecCCC
Q 019942 226 WFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVR 258 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~ 258 (333)
.+...|+.|+++++.|++.| .+..||||||-..
T Consensus 228 ~v~~~D~~vG~ll~~L~~~g~~dnTiviftSDhG~ 262 (492)
T 1fsu_A 228 MVSLMDEAVGNVTAALKSSGLWNNTVFIFSTDNGG 262 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCEEEEEECCCCC
Confidence 46667999999999999875 5788999999854
No 10
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=26.27 E-value=50 Score=31.11 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=42.5
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcE-EEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKY-TVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~Y-TViYtS~P 256 (333)
...|+|+++...+. ..+.+|.+ .+..|-+++++++..+.+.+++- -+|.+|.|
T Consensus 78 ~daDvVvitAg~pr---kpG~tR~d-----------ll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 78 KDLDVAILVGSMPR---RDGMERKD-----------LLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp TTCSEEEECCSCCC---CTTCCTTT-----------THHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCCCEEEEeCCCCC---CCCCCHHH-----------HHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 46789998843331 24578999 99999999999999998888875 48889999
No 11
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=26.06 E-value=59 Score=30.69 Aligned_cols=53 Identities=23% Similarity=0.357 Sum_probs=43.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. ..+.+|.+ .|..|-.++.++...+.+..++=-+|-+|.|
T Consensus 86 ~~aDiVvi~aG~~~---kpG~tR~d-----------L~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 86 ANSKLVIITAGARQ---QEGESRLN-----------LVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp TTEEEEEECCSCCC---CTTCCGGG-----------GHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred CCCCEEEEccCCCC---CCCccHHH-----------HHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 46799999943332 25678999 9999999999999999888888888999999
No 12
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.79 E-value=35 Score=33.25 Aligned_cols=34 Identities=6% Similarity=0.131 Sum_probs=27.3
Q ss_pred ccccccHHHHHHHHHhhhcC--CcEEEEEEecCCCC
Q 019942 226 WFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVRS 259 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~~ 259 (333)
.+...|+.|+++++.|++.| .+..||||||-...
T Consensus 253 ~i~~~D~~vG~ll~~L~~~g~~dnTiVIftSDHG~~ 288 (482)
T 3b5q_A 253 YTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDG 288 (482)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTGGGEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEECCCCcc
Confidence 45566999999999999765 56888999998543
No 13
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=25.47 E-value=1.4e+02 Score=28.30 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=28.2
Q ss_pred cccccccHHHHHHHHHhhhcC--CcEEEEEEecCCC
Q 019942 225 PWFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVR 258 (333)
Q Consensus 225 ~~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~ 258 (333)
..+...|..|+++++.|++.+ .+..||||||-..
T Consensus 273 ~~v~~~D~~ig~~l~~L~~~g~~~nTlvI~tsDHG~ 308 (450)
T 3lxq_A 273 NAVKYSDYALGTFFDKAKKSSYWDDTIFIVIADHDA 308 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSGGGEEEEEEESCCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCeEEEEECCCCc
Confidence 367778999999999999765 5788999999743
No 14
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=24.25 E-value=52 Score=31.72 Aligned_cols=33 Identities=15% Similarity=0.258 Sum_probs=27.0
Q ss_pred ccccccHHHHHHHHHhhhcCC--cEEEEEEecCCC
Q 019942 226 WFIHAGEVISELIDSVEKSGA--KYTVLYVSDPVR 258 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~~--~YTViYtS~P~~ 258 (333)
.+..-|+.|+++++.|++.|. +..||||||--.
T Consensus 273 ~i~~~D~~iG~ll~~L~~~g~~dnTlVIftSDHG~ 307 (502)
T 3ed4_A 273 NISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGP 307 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEeCCCCC
Confidence 455679999999999998753 688999999853
No 15
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=23.27 E-value=46 Score=31.13 Aligned_cols=53 Identities=13% Similarity=0.407 Sum_probs=43.1
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. .++.+|.+ .+..|-.+++++...+.+.+++-.+|-+|.|
T Consensus 77 ~~aDvVIiaag~p~---kpg~~R~d-----------l~~~N~~i~~~i~~~i~~~~p~a~vlvvsNP 129 (315)
T 3tl2_A 77 ADSDVVVITAGIAR---KPGMSRDD-----------LVATNSKIMKSITRDIAKHSPNAIIVVLTNP 129 (315)
T ss_dssp TTCSEEEECCSCCC---CTTCCHHH-----------HHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred CCCCEEEEeCCCCC---CCCCCHHH-----------HHHHHHHHHHHHHHHHHHhCCCeEEEECCCh
Confidence 46789999843331 24577888 9999999999999999888888889999999
No 16
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=22.85 E-value=46 Score=31.12 Aligned_cols=53 Identities=21% Similarity=0.432 Sum_probs=42.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. .++.+|.+ .|..|-.++.++...+.+..++=.+|-+|.|
T Consensus 68 ~~aDivii~ag~~r---kpG~~R~d-----------ll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 68 EGADVVLISAGVAR---KPGMDRSD-----------LFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp TTCSEEEECCSCSC---CTTCCHHH-----------HHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CCCCEEEEeCCCCC---CCCCCHHH-----------HHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 45789999843332 25578999 9999999999999999887888778888999
No 17
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2
Probab=22.44 E-value=55 Score=32.46 Aligned_cols=34 Identities=6% Similarity=0.096 Sum_probs=28.1
Q ss_pred ccccccHHHHHHHHHhhhcC--CcEEEEEEecCCCC
Q 019942 226 WFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVRS 259 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~~ 259 (333)
.+..-|+.|+++++.|++.| .+..||||||-...
T Consensus 290 ~v~~~D~~vG~il~~L~~~g~~dnTiviftsDhG~~ 325 (562)
T 1p49_A 290 AVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAH 325 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCeEEEEECCCCcc
Confidence 56778999999999999876 56889999998543
No 18
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=22.42 E-value=58 Score=31.51 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=26.5
Q ss_pred ccccccHHHHHHHHHhhhcC--CcEEEEEEecCCC
Q 019942 226 WFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVR 258 (333)
Q Consensus 226 ~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~ 258 (333)
.+..-|+.|+++++.|++.| .+..||||||-..
T Consensus 282 ~v~~~D~~iG~ll~~L~~~g~~dnTiIiftSDHG~ 316 (491)
T 2qzu_A 282 CITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGI 316 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSTTEEEEEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCCeEEEEECcCCc
Confidence 45557999999999999875 4678889999854
No 19
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=22.23 E-value=53 Score=30.39 Aligned_cols=53 Identities=19% Similarity=0.385 Sum_probs=42.9
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. ..+.+|.+ .+..|-.++.++...+.+.+++=.+|.+|.|
T Consensus 68 ~~aDiVViaag~~~---kpG~~R~d-----------l~~~N~~i~~~i~~~i~~~~p~a~iivvsNP 120 (294)
T 1oju_A 68 KGSEIIVVTAGLAR---KPGMTRLD-----------LAHKNAGIIKDIAKKIVENAPESKILVVTNP 120 (294)
T ss_dssp TTCSEEEECCCCCC---CSSCCHHH-----------HHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred CCCCEEEECCCCCC---CCCCcHHH-----------HHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence 35789999843331 24467888 8999999999999999988999999999999
No 20
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=22.03 E-value=62 Score=30.50 Aligned_cols=53 Identities=25% Similarity=0.448 Sum_probs=30.7
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhcCCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKSGAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~~~~YTViYtS~P 256 (333)
...|+++++.+.+. ..+.+|.+ .+..|-.++.++...+.+.+++=-+|-+|.|
T Consensus 75 ~~aDiVvi~ag~~~---kpG~tR~d-----------L~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 75 KDADLVVITAGAPQ---KPGETRLD-----------LVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp TTCSEEEECCCCC------------------------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred cCCCEEEECCCCCC---CCCchHHH-----------HHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 46789999843331 24568999 9999999999999999888888888888999
No 21
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=20.66 E-value=61 Score=30.84 Aligned_cols=53 Identities=11% Similarity=0.259 Sum_probs=42.4
Q ss_pred CCceEEEEecCCCCCCCCCCCCCCCcccCCccccccccccccHHHHHHHHHhhhc-CCcEEEEEEecC
Q 019942 190 GQADLIVVCYGDTQSMKQPKQPRPETWGNQRSWVHPWFIHAGEVISELIDSVEKS-GAKYTVLYVSDP 256 (333)
Q Consensus 190 ~~~~livv~~~~~~~~~~~~~~R~E~~~~~~~~~~~~l~~nDe~L~~vl~~l~~~-~~~YTViYtS~P 256 (333)
...|++++...-+. .++.+|.+ .|..|-.+++++...+.+. .++--||.+|.|
T Consensus 99 ~~advVvi~aG~pr---kpGmtR~D-----------Ll~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 99 DGVAIAIMCGAFPR---KAGMERKD-----------LLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp TTCSEEEECCCCCC---CTTCCHHH-----------HHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CCCCEEEECCCCCC---CCCCCHHH-----------HHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 46789999853332 25678999 9999999999999999764 466778899999
No 22
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=20.24 E-value=72 Score=30.54 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=27.6
Q ss_pred cccccccHHHHHHHHHhhhcC--CcEEEEEEecCCC
Q 019942 225 PWFIHAGEVISELIDSVEKSG--AKYTVLYVSDPVR 258 (333)
Q Consensus 225 ~~l~~nDe~L~~vl~~l~~~~--~~YTViYtS~P~~ 258 (333)
-.+...|+.|+++++.|++.| .+..||||||-..
T Consensus 226 ~~v~~~D~~iG~ll~~Lk~~gl~dnTiIv~tsDHG~ 261 (436)
T 2w8d_A 226 QSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYG 261 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSTTEEEEEEECSCS
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCeEEEEECCCCc
Confidence 356667999999999999865 5788999999743
Done!